Citrus Sinensis ID: 037566
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 360 | 2.2.26 [Sep-21-2011] | |||||||
| Q9STX2 | 388 | 3-oxo-Delta(4,5)-steroid | yes | no | 0.961 | 0.891 | 0.439 | 1e-79 | |
| Q6PQJ9 | 389 | 3-oxo-Delta(4,5)-steroid | N/A | no | 0.972 | 0.899 | 0.404 | 4e-72 | |
| O74913 | 405 | Uncharacterized protein C | yes | no | 0.872 | 0.775 | 0.239 | 9e-21 |
| >sp|Q9STX2|VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana GN=VEP1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/366 (43%), Positives = 221/366 (60%), Gaps = 20/366 (5%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
+ G SLAE L + T PGGPWKVYG ARRP P+W +D YI D D+ DT KLS
Sbjct: 37 IVGNSLAEILPLSDT-PGGPWKVYGVARRPRPTWNADHPID-YIQCDVSDAEDTRSKLSP 94
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
++ +VTH+F+V + +SE N N +M +NV+ ++ LRHV L GTKHY+
Sbjct: 95 LT-DVTHVFYVTWTNRESESENCEANGSMLRNVLQAIIPY---APNLRHVCLQTGTKHYL 150
Query: 121 GP---VFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDI---AASYSPAVTYSVHRSS 174
GP V P HDPPF ED RL NFYY EDI VT+S+HR +
Sbjct: 151 GPFTNVDGPR-------HDPPFTEDMPRLQIQNFYYTQEDILFEEIKKIETVTWSIHRPN 203
Query: 175 IIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAA 234
+I G S SL N + TL VYA IC+H+G P + G+K WE F SD+ ++AEQQIWAA
Sbjct: 204 MIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGSKKAWEGFMTASDADLIAEQQIWAA 263
Query: 235 TTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEI 294
AKN+AFNC N D+F WK LWK+L+E F +E F+E + VEMMK K +W+E+
Sbjct: 264 VDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEYGFEEGKNLGLVEMMKGKERVWEEM 323
Query: 295 VEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLR 354
V+++ L + K+EE+ + + +L ++ + SMNKS+E+GF GF ++ S +W+ K +
Sbjct: 324 VKENQLQEKKLEEVGVWWFADVILGVE-GMIDSMNKSKEYGFLGFRNSNNSFISWIDKYK 382
Query: 355 EMKIIP 360
KI+P
Sbjct: 383 AFKIVP 388
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Involved in vascular strand development. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 21-acetyl cortexone, 2-cyclohexenone, but-1-en-3-one, ethyl acrylate, ethylmethacrylate, cortisone and canarigenone as substrates, lower activity with 3-methyl-2-cyclohexenone and 3,5,5-trimethyl-2-cyclohexenone as substrate, and no activity with canarigenin, canarigenin digitoxoside and pregnenolone. May be involved in the formation of 5-beta phytoecdysteroids. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3 |
| >sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1 SV=1 | Back alignment and function description |
|---|
Score = 272 bits (695), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 215/363 (59%), Gaps = 13/363 (3%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
+ G SLAE L T PGGPWKVYG ARR P+W + ++ Y+ D D D+ KLS
Sbjct: 37 IIGNSLAEILPLADT-PGGPWKVYGVARRTRPAWHEDNPIN-YVQCDISDPDDSQAKLSP 94
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
++ +VTH+F+V + +E+ N NS MF+NV+ V+ + L+H++L G KHYM
Sbjct: 95 LT-DVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNC---PNLKHISLQTGRKHYM 150
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDI---AASYSPAVTYSVHRSSIII 177
GP G++ HDPP+ ED RL + NFYY +EDI +T+SVHR I
Sbjct: 151 GPF---ESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIF 207
Query: 178 GASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD 237
G S S+ N + TL VYA IC+H+G R+ G K W+ + D SD+ ++AE IWAA
Sbjct: 208 GFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP 267
Query: 238 RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEK 297
AKN+AFN +NGDVF WK WK+L+E F V ++E ++MK K +W+EIV +
Sbjct: 268 YAKNEAFNVSNGDVFKWKHFWKVLAEQFGVGCGEYEEGVDLKLQDLMKGKEPVWEEIVRE 327
Query: 298 HGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMK 357
+GL TK++++ + + +L + + SMNKS+E GF GF ++ + +W+ K + K
Sbjct: 328 NGLTPTKLKDVGIWWFGDVILGNEC-FLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYK 386
Query: 358 IIP 360
I+P
Sbjct: 387 IVP 389
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Involved in cardenolide biosynthesis. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 4-androstene-3,17-dione, cortisol and cortisone as substrates, but not pregnenolone, 21-OH-pregnenolone or isoprogesterone. NADPH could not be replaced by NADH. Digitalis lanata (taxid: 49450) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 |
| >sp|O74913|YJ72_SCHPO Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.02c PE=4 SV=1 | Back alignment and function description |
|---|
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 153/371 (41%), Gaps = 57/371 (15%)
Query: 35 FPSSHVDHYITFDALDSTDTTQKLS-SISQEVTHLFWVMFQRLKSEEINISNNSTMFKNV 93
+P H I + D +K S + + + ++ ++ +EE N M +N
Sbjct: 45 YPRKIKHHSIDLLNEEPKDIAKKFSLEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNF 104
Query: 94 MSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP-----F 148
+ + ++ LR V L G K Y + + L P E +R+P
Sbjct: 105 VQALELTS--IQTLRRVILTTGLKFYGLHLGEVRL---------PMIETDIRVPETFSGT 153
Query: 149 PNFYYAVEDIAASYSPAVT--YSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206
PNFYY EDI +S Y++ + I G S S N T+A+YA +CR PFR
Sbjct: 154 PNFYYVQEDILKEFSNGKKWDYTIAMPNDICGVSKGSYMNEAFTIALYALVCRELHEPFR 213
Query: 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFD 266
+ GN+ + F D+S S+++A+ Q+W + FN NGD+ +W W ++E F
Sbjct: 214 FPGNEKFYLGFDDISYSKLIADFQLWMTFKAECSEEKFNIVNGDIHSWSRTWPKIAEYFG 273
Query: 267 VEF----------------------VPFDEKE-------------KFDAVEMMKEKG--E 289
VE + EKE + + +K+K +
Sbjct: 274 VEVPKNQFATDFTLSTEVTLSTPSPINLYEKELGIKHTPNSKIINQISLQQWVKQKKVQD 333
Query: 290 IWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTW 349
W I E+ L + E+ + + + + +SSM+K+R+ G+ + DT +
Sbjct: 334 AWRTIAEREKLNAHAL-EVGTWAFCDFLFGRTYNVISSMSKARKLGYTDYYDTFDGFKET 392
Query: 350 VKKLREMKIIP 360
+L++ K IP
Sbjct: 393 FDELKKQKQIP 403
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 360 | ||||||
| 224132720 | 377 | predicted protein [Populus trichocarpa] | 0.991 | 0.946 | 0.703 | 1e-150 | |
| 224132716 | 377 | predicted protein [Populus trichocarpa] | 0.991 | 0.946 | 0.700 | 1e-149 | |
| 118489550 | 377 | unknown [Populus trichocarpa x Populus d | 0.991 | 0.946 | 0.703 | 1e-149 | |
| 356521805 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.954 | 0.680 | 1e-146 | |
| 357478899 | 376 | hypothetical protein MTR_4g121570 [Medic | 0.991 | 0.949 | 0.630 | 1e-138 | |
| 357473789 | 376 | hypothetical protein MTR_4g073090 [Medic | 0.991 | 0.949 | 0.655 | 1e-137 | |
| 359477226 | 470 | PREDICTED: uncharacterized protein C757. | 0.991 | 0.759 | 0.647 | 1e-137 | |
| 225431890 | 376 | PREDICTED: uncharacterized protein C757. | 0.991 | 0.949 | 0.658 | 1e-134 | |
| 357478903 | 376 | hypothetical protein MTR_4g121590 [Medic | 0.991 | 0.949 | 0.605 | 1e-130 | |
| 148907132 | 399 | unknown [Picea sitchensis] | 0.977 | 0.882 | 0.478 | 4e-89 |
| >gi|224132720|ref|XP_002327864.1| predicted protein [Populus trichocarpa] gi|222837273|gb|EEE75652.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/361 (70%), Positives = 299/361 (82%), Gaps = 4/361 (1%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
+AG SLAEAL+ PT PG PWKVYG ARRP P WFP+ VD +I+ DALD DT KLS
Sbjct: 20 LAGFSLAEALQK-PTTPGRPWKVYGIARRPLPIWFPAFLVDGFISLDALDCADTANKLSP 78
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
++ E+TH+FWV Q +EE+NIS NSTM NV++ + + SRLRHVTLL GTKHYM
Sbjct: 79 VAHEITHVFWVSMQHHGNEEVNISMNSTMLANVLNAL--KSTAPSRLRHVTLLTGTKHYM 136
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGAS 180
GP+FDPSL GQL+ +PPFKED RLP+PNFYYA+ED+ ASY P++T+SVHRSSIIIGAS
Sbjct: 137 GPIFDPSLRGQLVHQEPPFKEDLGRLPYPNFYYALEDLVASYLPSITHSVHRSSIIIGAS 196
Query: 181 SRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 240
SRSLNN+LLTL+VYATICR+QGLPFRY GNKYTWEHFCD+SD+R+LAEQQIWAA T+ AK
Sbjct: 197 SRSLNNTLLTLSVYATICRYQGLPFRYPGNKYTWEHFCDVSDARMLAEQQIWAAVTEGAK 256
Query: 241 NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDE-KEKFDAVEMMKEKGEIWDEIVEKHG 299
NQAFNCTNGDVFTWKSLW +L E+FDVEFV F+E +EKFD + M+K KG++WDEIVEK G
Sbjct: 257 NQAFNCTNGDVFTWKSLWGVLCEVFDVEFVAFEENEEKFDWLGMIKGKGKVWDEIVEKFG 316
Query: 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKII 359
L++TKME+ITCFEALN LH FQHV SMNKSRE GF GFADT+KSI WV +LR+MKII
Sbjct: 317 LFETKMEDITCFEALNVGLHFGFQHVCSMNKSRESGFLGFADTLKSIPMWVGRLRDMKII 376
Query: 360 P 360
P
Sbjct: 377 P 377
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132716|ref|XP_002327863.1| predicted protein [Populus trichocarpa] gi|222837272|gb|EEE75651.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/361 (70%), Positives = 296/361 (81%), Gaps = 4/361 (1%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
M G SLAEALK PT G PWKVYG ARRP PSWFPSS +D +++ DALD DT KL
Sbjct: 20 MVGFSLAEALKQ-PTTQGSPWKVYGVARRPLPSWFPSSLIDCFLSLDALDHEDTKNKLFP 78
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
++ E+TH+FW+ + SEE+NIS NSTM NV++ + + SRLRHVTLL GTKHYM
Sbjct: 79 VAHEITHVFWISRKLRDSEEVNISMNSTMLANVLNAL--KSAFPSRLRHVTLLTGTKHYM 136
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGAS 180
GP+FDPSL GQL+ +PPFKED RLP+PNFYYA+ED+ SY P++T+SVHRSSIIIGAS
Sbjct: 137 GPIFDPSLRGQLVHQEPPFKEDLGRLPYPNFYYALEDLVVSYLPSITHSVHRSSIIIGAS 196
Query: 181 SRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 240
SRSLNN+LLTL+VYATICR+QGLPF Y GNKY WEHFCDMSD+RVLAEQQIWAA T+ AK
Sbjct: 197 SRSLNNTLLTLSVYATICRYQGLPFLYPGNKYIWEHFCDMSDARVLAEQQIWAAVTEGAK 256
Query: 241 NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEK-EKFDAVEMMKEKGEIWDEIVEKHG 299
NQAFNCTNGDVFTWKSLW +L E+FDVEFV ++E EKFD + MMK KG++WDEIVEK+G
Sbjct: 257 NQAFNCTNGDVFTWKSLWGVLCEVFDVEFVAYEENDEKFDCLAMMKGKGKVWDEIVEKYG 316
Query: 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKII 359
L++TKME+ITCFEALN VLH FQHV SMNKSRE GF GFADT+KSI WV +LR+MKII
Sbjct: 317 LFETKMEDITCFEALNVVLHFGFQHVCSMNKSRESGFQGFADTLKSIPMWVGRLRDMKII 376
Query: 360 P 360
P
Sbjct: 377 P 377
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118489550|gb|ABK96577.1| unknown [Populus trichocarpa x Populus deltoides] | Back alignment and taxonomy information |
|---|
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 254/361 (70%), Positives = 296/361 (81%), Gaps = 4/361 (1%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
+AG SLAEAL+ PT PG PWKVYG ARRP P WFP+ VD +I+ DALD DT KLS
Sbjct: 20 LAGFSLAEALQK-PTTPGRPWKVYGIARRPLPRWFPAFLVDGFISLDALDCADTANKLSP 78
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
++ E+TH+FWV Q +EE+NIS NSTM NV++ + + SRLRHVTLL GTKHYM
Sbjct: 79 VAHEITHVFWVSMQHHGNEEVNISMNSTMLANVLNAL--KSTAPSRLRHVTLLTGTKHYM 136
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGAS 180
GP+FDPSL GQL+ +PPFKED RLP PNFYYA+ED+ ASY P++T+SVHRSSIIIGAS
Sbjct: 137 GPIFDPSLRGQLVHQEPPFKEDLGRLPCPNFYYALEDLVASYLPSITHSVHRSSIIIGAS 196
Query: 181 SRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 240
SRS N++LLTL+VYATICR+QGLPFRY GNKYTWEHFCDMSD+RVLAEQQIWAA T+ AK
Sbjct: 197 SRSPNDTLLTLSVYATICRYQGLPFRYPGNKYTWEHFCDMSDARVLAEQQIWAAVTEGAK 256
Query: 241 NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEK-EKFDAVEMMKEKGEIWDEIVEKHG 299
NQAFNCTNGDVFTWKSLW +L E+FDVEFV F+E EKFD + M+K KG++WDEIVEK G
Sbjct: 257 NQAFNCTNGDVFTWKSLWGVLCEVFDVEFVAFEENDEKFDWLGMIKGKGKVWDEIVEKFG 316
Query: 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKII 359
L++TKME+ITCFEALN LH FQHV SMNKSRE GF GFADT+KSI WV +LR+MKII
Sbjct: 317 LFETKMEDITCFEALNVGLHFGFQHVCSMNKSRESGFLGFADTLKSIPMWVGRLRDMKII 376
Query: 360 P 360
P
Sbjct: 377 P 377
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Source: Populus trichocarpa x Populus deltoides Species: Populus trichocarpa x Populus deltoides Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521805|ref|XP_003529541.1| PREDICTED: uncharacterized protein LOC100812240 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 245/360 (68%), Positives = 286/360 (79%), Gaps = 3/360 (0%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
+ GLSLAE LK P GGPWKVYG ARRPPPSWF S VDH+ITFDA DS+DT KLS
Sbjct: 16 LTGLSLAETLKK-PNCLGGPWKVYGAARRPPPSWFSPSMVDHFITFDAEDSSDTRAKLSP 74
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
I+ EVTHLFWV FQ EE N + N TM N+++ + S SRL HVT+ GTKHYM
Sbjct: 75 IAHEVTHLFWVTFQIHADEEYNATVNKTMLLNLLTALKSSTT--SRLAHVTVQTGTKHYM 132
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGAS 180
GPVFDP QLIGH PPF E+ RLP+PNFYYA+ED+ ASY+P++TYSVHRSSIIIGAS
Sbjct: 133 GPVFDPVHSTQLIGHQPPFDENMPRLPYPNFYYALEDLVASYAPSLTYSVHRSSIIIGAS 192
Query: 181 SRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 240
SRS+ N+LLTLA YA ICRH GL FRY G +YTWEHFCDM+D+ VLA+Q +WAA T AK
Sbjct: 193 SRSVYNALLTLATYAVICRHVGLAFRYPGTRYTWEHFCDMTDAGVLAQQHVWAAVTPNAK 252
Query: 241 NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGL 300
NQAFNCTNGDVF WK++WKLL+E+FDVEFV FDE KFD E+M +KG +W+EIVEK+ L
Sbjct: 253 NQAFNCTNGDVFAWKTVWKLLAELFDVEFVAFDESHKFDLAELMHDKGSVWEEIVEKYEL 312
Query: 301 YKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360
+ TK+EEITC+EAL TVLH +FQHVS+MNKSRE GFFG DT+KSIR WVKKLR+MKI+P
Sbjct: 313 HNTKLEEITCYEALQTVLHFKFQHVSAMNKSREHGFFGHVDTLKSIRFWVKKLRQMKIMP 372
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357478899|ref|XP_003609735.1| hypothetical protein MTR_4g121570 [Medicago truncatula] gi|355510790|gb|AES91932.1| hypothetical protein MTR_4g121570 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 227/360 (63%), Positives = 287/360 (79%), Gaps = 3/360 (0%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
M GLSLAEALK P GGPWKVYG AR P WFPSS +D +ITFDA++S DT KL
Sbjct: 16 MVGLSLAEALKQ-PDCLGGPWKVYGGARHSPDEWFPSSILDGFITFDAVNSADTHAKLLP 74
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
I+ EVTH+FWV FQ ++ EE+NI+ N +M NV++V+ S S L H+T+ GTKHYM
Sbjct: 75 IANEVTHIFWVTFQFVEDEEVNITVNKSMLHNVVTVLKSSPS--SPLTHITVQTGTKHYM 132
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGAS 180
GP++DP +LI H+PPF E+ RLP+PNFYY +ED+ ASY+P++TYS+HRSS+IIGAS
Sbjct: 133 GPIYDPVRSNKLICHEPPFNENMPRLPYPNFYYTLEDLVASYTPSITYSIHRSSLIIGAS 192
Query: 181 SRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 240
SRS N+++ LA YA ICRH GLPFRY GN+YTWEHFCDMSD+ VLA+Q +WA T +AK
Sbjct: 193 SRSAINAMMMLATYAAICRHVGLPFRYPGNRYTWEHFCDMSDAGVLAKQHVWAGVTKKAK 252
Query: 241 NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGL 300
NQAFNCTNGD+FTWKS+W LLSE+FDVEFV D+KE+FD +E+M++KGE+WD IVEK+GL
Sbjct: 253 NQAFNCTNGDIFTWKSMWMLLSEVFDVEFVELDDKEEFDIIELMRDKGEVWDLIVEKYGL 312
Query: 301 YKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360
+KTK++EI CFEA+ V+ +FQHVSSMNKS+++GF +ADT KSI+ WV KLREMK+IP
Sbjct: 313 HKTKLKEIACFEAMVPVVRFEFQHVSSMNKSKDYGFLEYADTFKSIKLWVAKLREMKLIP 372
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357473789|ref|XP_003607179.1| hypothetical protein MTR_4g073090 [Medicago truncatula] gi|355508234|gb|AES89376.1| hypothetical protein MTR_4g073090 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/360 (65%), Positives = 283/360 (78%), Gaps = 3/360 (0%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
MAGLSLA+ALK P GGPWKVYG ARR WFPSS +D +ITFDA++S DT KL
Sbjct: 16 MAGLSLAKALKQ-PDCLGGPWKVYGAARRSADGWFPSSILDGFITFDAVNSADTHDKLLP 74
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
+ QEVTHLFWV FQ + EE NI+ N TM NV++V+ S S L H+TL GTKHYM
Sbjct: 75 LVQEVTHLFWVTFQFVGDEEANITVNKTMLLNVLTVLKSSPS--SSLIHITLQTGTKHYM 132
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGAS 180
GPV DP L +LI H+PPF E+ RLP+PNFYY +ED+ SY+P+VTYS+HRSSIIIG S
Sbjct: 133 GPVHDPVLSTKLICHEPPFHENMPRLPYPNFYYVLEDLVTSYAPSVTYSIHRSSIIIGMS 192
Query: 181 SRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 240
RS +N L+ LAVYA IC H GLPFRY GNKYTWEHFCDM+D+ VLA+Q +WAA T+ AK
Sbjct: 193 PRSAHNVLMKLAVYAAICHHLGLPFRYPGNKYTWEHFCDMTDAGVLAKQHVWAAVTEDAK 252
Query: 241 NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGL 300
NQAFNCTNGDVFTWKS+W LLSE+F+V+FV ++KE+FD VE+M++KGEIWD IVE++GL
Sbjct: 253 NQAFNCTNGDVFTWKSMWMLLSEVFNVKFVELNDKEEFDLVELMRDKGEIWDLIVEEYGL 312
Query: 301 YKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360
+KTK+EEI FEA VL QFQHVSSMNKS+++GFF +ADT KSIR WV KLREMK+IP
Sbjct: 313 HKTKLEEIASFEATVPVLRFQFQHVSSMNKSKDYGFFEYADTFKSIRFWVAKLREMKLIP 372
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477226|ref|XP_002276059.2| PREDICTED: uncharacterized protein C757.02c-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/360 (64%), Positives = 292/360 (81%), Gaps = 3/360 (0%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
M GLSLAEALK P GGPWKVYG ARRP P+WFP+S+VD YI FDA++ DT KLS
Sbjct: 110 MVGLSLAEALKK-PRALGGPWKVYGAARRPKPTWFPTSNVDDYIAFDAVNPDDTRAKLSP 168
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
IS EVTH+FWV Q ++EE+N++ N+ M NV+ V+ + SRLRH+TL GT+HY+
Sbjct: 169 ISHEVTHVFWVAIQVRETEELNVTVNAAMLSNVLGVL--KSVPSSRLRHLTLQTGTQHYI 226
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGAS 180
GP+ DP+ GQL + PF+EDS RLPFPNFYYA+ED+ ASYSP+++YS+HRSSII+GAS
Sbjct: 227 GPLHDPNHSGQLPCPETPFREDSARLPFPNFYYALEDLIASYSPSLSYSIHRSSIILGAS 286
Query: 181 SRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 240
SRS N+LLTLA YA IC+H+ LPFRY G +YTWEHFCDMSD+R+LAEQQIWA +++AK
Sbjct: 287 SRSAYNALLTLAAYAAICKHESLPFRYPGTRYTWEHFCDMSDARLLAEQQIWAGVSEKAK 346
Query: 241 NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGL 300
NQAFNC NGDVFTWKS+WK++ E+FDVEFV FDE ++FD V MM KG++W+ IV+K+GL
Sbjct: 347 NQAFNCVNGDVFTWKSMWKVVCEVFDVEFVEFDESQEFDFVGMMSGKGKVWESIVKKYGL 406
Query: 301 YKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360
Y+TK+EEITCF AL TVLH++FQHV SMNKSR FG+FG DT++S+ TWV++LR MKIIP
Sbjct: 407 YETKLEEITCFAALKTVLHMEFQHVCSMNKSRNFGWFGHVDTLQSVGTWVERLRVMKIIP 466
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431890|ref|XP_002276159.1| PREDICTED: uncharacterized protein C757.02c-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/360 (65%), Positives = 288/360 (80%), Gaps = 3/360 (0%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
MAGLSLAEALK P+ G PWKVYG ARRP P+WFP S VDHY+TFDA+ S DT KLS
Sbjct: 20 MAGLSLAEALKK-PSASGSPWKVYGAARRPQPTWFPISIVDHYMTFDAVCSDDTRAKLSP 78
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
IS EVTH+FWV Q ++EE+NI+ N+ M NV+ V + SRL+HVTL GTKHYM
Sbjct: 79 ISNEVTHVFWVAIQVRETEELNITVNAAMLSNVLEVF--KSAPSSRLQHVTLQTGTKHYM 136
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGAS 180
GP+F P QL + PF+ED RLPFPNFYYA+ED+ AS++P+ TYSVHRSSIIIGAS
Sbjct: 137 GPIFYPEKSKQLTAPETPFREDFPRLPFPNFYYALEDLLASHTPSFTYSVHRSSIIIGAS 196
Query: 181 SRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 240
SRS N+LLTLAVYA IC+H+GLPFRY G +YTW+HFCDMSD+RVLAEQQIWAA +++AK
Sbjct: 197 SRSTYNALLTLAVYAAICKHEGLPFRYPGTRYTWDHFCDMSDARVLAEQQIWAAVSEKAK 256
Query: 241 NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGL 300
NQAFNC NGD+FTWKS+WK++ E+F+VEFV FDE ++FD V MM EKG++W+ IV+KHGL
Sbjct: 257 NQAFNCVNGDIFTWKSMWKVVCEVFEVEFVEFDESQEFDFVGMMSEKGKVWESIVKKHGL 316
Query: 301 YKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360
Y++K+EEITCF AL VLH +FQHV SMNKSR FG+FG DT++SI WV++LR M IIP
Sbjct: 317 YESKLEEITCFAALKAVLHFEFQHVCSMNKSRSFGWFGHVDTLQSIGIWVERLRVMNIIP 376
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357478903|ref|XP_003609737.1| hypothetical protein MTR_4g121590 [Medicago truncatula] gi|355510792|gb|AES91934.1| hypothetical protein MTR_4g121590 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/360 (60%), Positives = 276/360 (76%), Gaps = 3/360 (0%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
MAGLSLA+ALK P GGPWKVYG AR P WFPSS +D +ITFDA++S DT KL
Sbjct: 16 MAGLSLAKALKQ-PDCLGGPWKVYGAARHSPDEWFPSSILDSFITFDAVNSADTRAKLLP 74
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
I+ EVTHLFWV FQ + EE+ IS N +M NV++V+ + S L H+T+ GTKHY+
Sbjct: 75 IANEVTHLFWVTFQLVADEEVKISVNKSMLLNVLTVL--KSYPSSPLTHITVQTGTKHYL 132
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGAS 180
GPV DP +LI H+PPF+E+ RL +PNFYYA+ED+ SY+P++TYS+HRSSIIIGAS
Sbjct: 133 GPVHDPVQSTKLICHEPPFEENMPRLSYPNFYYALEDLVKSYAPSITYSIHRSSIIIGAS 192
Query: 181 SRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 240
RS N L+ LA YA ICR GLPFR+ GN+YTWEHFCDM+D+RVLA+Q +WAA T +AK
Sbjct: 193 PRSAYNMLMVLATYAAICRQVGLPFRFPGNRYTWEHFCDMTDARVLAKQHVWAAVTKKAK 252
Query: 241 NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGL 300
NQAFNCTNGDVF WKS+WK+L + F V+FV DEKE+FD V+ M++KGE+WD+IVE++GL
Sbjct: 253 NQAFNCTNGDVFAWKSMWKVLCKTFAVKFVDLDEKEEFDLVQFMRDKGEVWDQIVEEYGL 312
Query: 301 YKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360
+KTK+EEI CF+AL V +FQ VSSMNKS+ + FF +A+T S++ WV KLREM +IP
Sbjct: 313 HKTKLEEIACFDALVPVFRFEFQLVSSMNKSKNYEFFEYAETFNSVKFWVMKLREMNLIP 372
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|148907132|gb|ABR16709.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
|---|
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 174/364 (47%), Positives = 239/364 (65%), Gaps = 12/364 (3%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
+ G LAE L + T P GPWKVYG ARRP P W P S V+ YI D LD T +K+S
Sbjct: 44 IVGNCLAEILPLSDT-PRGPWKVYGVARRPKPDWSPDSPVE-YIQCDVLDRELTLEKISP 101
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
+ ++VTHLFWV++ ++EE N +N M NV+ ++ + + L+H+ L G KHY+
Sbjct: 102 L-KDVTHLFWVVWVSRETEEQNCEDNGRMLSNVLDALLPNAE---NLQHICLQTGAKHYL 157
Query: 121 GPVFDPSLVGQLIG-HDPPFKEDSLRLPFPNFYYAVEDI---AASYSPAVTYSVHRSSII 176
GP FD + + H+ P+ E+ RLP PNFYY +EDI AA +T+S+HR + I
Sbjct: 158 GP-FDAAARNRCFQPHEAPYHEELPRLPVPNFYYTLEDIVFEAAKKKDGLTWSIHRPAAI 216
Query: 177 IGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATT 236
IG S SL N L TL VYA IC+H+GLPF+Y GN +WE F D SD+ ++AEQ+IWAAT
Sbjct: 217 IGFSPWSLMNVLGTLCVYAAICKHEGLPFKYPGNTISWEQFMDASDAELIAEQEIWAATD 276
Query: 237 DRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVE 296
AKNQAFNC+NGDVF WK LW++++E FD+E +P E E F E MK+KG +WD IV
Sbjct: 277 PYAKNQAFNCSNGDVFKWKRLWRIIAEKFDLEPLP-REGEGFSLAEAMKDKGPVWDAIVG 335
Query: 297 KHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREM 356
++ LY TK+EE+ + + VL++ ++ V SMNKS+E+GFFGF +T S+ W+ K+R
Sbjct: 336 ENKLYPTKIEEVGNWWFADFVLNVPWEPVFSMNKSKEYGFFGFRNTETSVGQWIDKIRAS 395
Query: 357 KIIP 360
I+P
Sbjct: 396 NIVP 399
|
Source: Picea sitchensis Species: Picea sitchensis Genus: Picea Family: Pinaceae Order: Coniferales Class: Coniferopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 360 | ||||||
| TAIR|locus:2135932 | 388 | VEP1 "VEIN PATTERNING 1" [Arab | 0.969 | 0.899 | 0.415 | 1.8e-71 | |
| UNIPROTKB|Q48IK0 | 353 | PSPPH_2587 "Aldo-keto reductas | 0.797 | 0.813 | 0.353 | 1.1e-41 | |
| UNIPROTKB|Q882D3 | 353 | PSPTO_2695 "Uncharacterized pr | 0.897 | 0.915 | 0.325 | 1.7e-41 | |
| TAIR|locus:2178793 | 386 | AT5G58750 [Arabidopsis thalian | 0.927 | 0.865 | 0.309 | 1.8e-39 | |
| UNIPROTKB|Q4K649 | 386 | PFL_5207 "Uncharacterized prot | 0.902 | 0.841 | 0.270 | 3.1e-28 | |
| ASPGD|ASPL0000051603 | 376 | AN9028 [Emericella nidulans (t | 0.941 | 0.901 | 0.267 | 9e-22 | |
| POMBASE|SPCC757.02c | 405 | SPCC757.02c "epimarase (predic | 0.619 | 0.550 | 0.271 | 2.3e-17 | |
| ASPGD|ASPL0000040978 | 437 | AN2921 [Emericella nidulans (t | 0.688 | 0.567 | 0.274 | 2.5e-17 | |
| ASPGD|ASPL0000017248 | 424 | AN4177 [Emericella nidulans (t | 0.633 | 0.537 | 0.258 | 2.8e-10 |
| TAIR|locus:2135932 VEP1 "VEIN PATTERNING 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 151/363 (41%), Positives = 210/363 (57%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
+ G SLAE L + T PGGPWKVYG ARRP P+W +D YI D D+ DT KLS
Sbjct: 37 IVGNSLAEILPLSDT-PGGPWKVYGVARRPRPTWNADHPID-YIQCDVSDAEDTRSKLSP 94
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
++ +VTH+F+V + +SE N N +M +NV+ ++ LRHV L GTKHY+
Sbjct: 95 LT-DVTHVFYVTWTNRESESENCEANGSMLRNVLQAIIPY---APNLRHVCLQTGTKHYL 150
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA---ASYSPAVTYSVHXXXXXX 177
GP ++ G HDPPF ED RL NFYY EDI VT+S+H
Sbjct: 151 GPF--TNVDGPR--HDPPFTEDMPRLQIQNFYYTQEDILFEEIKKIETVTWSIHRPNMIF 206
Query: 178 XXXXXXXXXXXXXXAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD 237
VYA IC+H+G P + G+K WE F SD+ ++AEQQIWAA
Sbjct: 207 GFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGSKKAWEGFMTASDADLIAEQQIWAAVDP 266
Query: 238 RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEK 297
AKN+AFNC N D+F WK LWK+L+E F +E F+E + VEMMK K +W+E+V++
Sbjct: 267 YAKNEAFNCNNADIFKWKHLWKILAEQFGIEEYGFEEGKNLGLVEMMKGKERVWEEMVKE 326
Query: 298 HGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMK 357
+ L + K+EE+ + + +L ++ + SMNKS+E+GF GF ++ S +W+ K + K
Sbjct: 327 NQLQEKKLEEVGVWWFADVILGVEGM-IDSMNKSKEYGFLGFRNSNNSFISWIDKYKAFK 385
Query: 358 IIP 360
I+P
Sbjct: 386 IVP 388
|
|
| UNIPROTKB|Q48IK0 PSPPH_2587 "Aldo-keto reductase family protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 105/297 (35%), Positives = 150/297 (50%)
Query: 66 THLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFD 125
TH+F + R +E NI N+ M +NV+ V + ++HV L+ G KHY+GP F+
Sbjct: 65 THVFITTWSRQATEAENIRVNAAMVRNVLDAV----RPAGSVKHVALVTGLKHYLGP-FE 119
Query: 126 PSLVGQLIGHDPPFKEDSLRLPFPNFYYAVED--IAASYSPAVTYSVHXXXXXXXXXXXX 183
G L PF+E RL NFYYA ED AA+ T+SVH
Sbjct: 120 AYGKGTL--PQTPFRETQARLDIENFYYAQEDEVFAAAEKDGFTWSVHRPHTVTGVAVGN 177
Query: 184 XXXXXXXXAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQA 243
AVYA+IC+ G PF + G++ W+ DM+D+R LA QQ+WAATT A NQA
Sbjct: 178 AMNMATTLAVYASICKATGRPFVFPGSRVQWDSLTDMTDARQLAHQQLWAATTPAAANQA 237
Query: 244 FNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKT 303
FN TNGDVF W +W ++E FD++ F E M + W +IV +H L +
Sbjct: 238 FNITNGDVFRWSWMWGQIAEYFDLQPADFPS-EPAPLETQMADDQAAWTDIVREHQLKEG 296
Query: 304 KMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360
+ + + L + V+ M+KSR+ GF F + + +KLR ++IP
Sbjct: 297 DINRLISPWHTDADLGRPIEVVTDMSKSRKLGFTAFQASDDAFFEVFEKLRRDRLIP 353
|
|
| UNIPROTKB|Q882D3 PSPTO_2695 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 112/344 (32%), Positives = 165/344 (47%)
Query: 21 WKVYGTARRPP--PSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKS 78
W+V +R P P P + D D T L+ + TH+F + R +
Sbjct: 27 WQVAALSRSPSTRPGVIP-------VAADLQDPASVTAALADLRP--THIFITTWSRQAT 77
Query: 79 EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138
E NI N+ M +NV+ V + ++HV L+ G KHY+GP F+ G L P
Sbjct: 78 EAENIRVNAAMVRNVLDAV----RPAGSVKHVALVTGLKHYLGP-FEAYGKGTL--PQTP 130
Query: 139 FKEDSLRLPFPNFYYAVED--IAASYSPAVTYSVHXXXXXXXXXXXXXXXXXXXXAVYAT 196
F+E RL NFYYA ED AA+ T+SVH AVYA+
Sbjct: 131 FRESQPRLDIENFYYAQEDEVFAAAEKDRFTWSVHRPHTVTGVAVGNAMNMATTLAVYAS 190
Query: 197 ICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKS 256
IC+ G PF + G++ W+ DM+D+R LA QQ+WAATT A NQAFN TNGDVF W
Sbjct: 191 ICKATGRPFVFPGSRVQWDSLTDMTDARQLAHQQLWAATTPAAANQAFNITNGDVFRWSW 250
Query: 257 LWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNT 316
+W ++ F +E F + +M ++ W I ++H L ++ + + +
Sbjct: 251 MWGQIAGYFGLEPADFPSQPALLETQMADDQ-TAWTRIAQEHQLKESDINRLISPWHTDA 309
Query: 317 VLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360
L + V+ M+KSR+ GF F + + +KLR ++IP
Sbjct: 310 DLGRPIEVVTDMSKSRKLGFTAFQASDDAFFEVFEKLRRDRLIP 353
|
|
| TAIR|locus:2178793 AT5G58750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 110/355 (30%), Positives = 177/355 (49%)
Query: 17 PGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR- 75
PG W++YG AR P + + ++I+ D L++++T Q+LS + V+H+FWV +
Sbjct: 41 PG--WRIYGVARNPEINSMTKMY--NFISCDLLNASETKQRLSPLQDIVSHVFWVTWSGE 96
Query: 76 --LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133
L ++E + N TM N + ++ + K RL+H +L G KHY+ V + G+
Sbjct: 97 FPLDTDECCVQNK-TMLMNALDAILPNAK---RLKHFSLQTGMKHYVSLVEETMARGEGS 152
Query: 134 GHDPPFKEDSLRLPFPNFYYAVEDIAASY--SPAVTYSVHXXXXXXXXXXXXXXXXXXXX 191
+E + NFYY +ED+ +V +SV
Sbjct: 153 SLYYYSEECPRKSSGKNFYYVLEDLLKEKITRSSVVWSVQRPGLLMGSSSRTLYNFMGSL 212
Query: 192 AVYATICRHQGLPFRYLGNKYTWEH-FCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTN 248
VY +C++ LPF + G + WE + D SDS ++AEQ I+AAT+ R K +AFN N
Sbjct: 213 CVYGAMCKYLNLPFVFGGTRECWEESYIDGSDSNLVAEQHIFAATSGKVREKGEAFNAIN 272
Query: 249 GDVFTWKSLWKLLSEIFDV---EFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKM 305
G FTWK +W + + V E FDE F EM++ K +WDEIV K L +T++
Sbjct: 273 GVGFTWKEIWPEIGKKLGVQVNETTMFDEGFWFGR-EMVERK-HVWDEIVVKEKLVRTEI 330
Query: 306 EEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360
E++ + L+ + F+ + K FGF T+ S+ W+ +R+ K+IP
Sbjct: 331 EDLANWYFLDALFRCPFKLLGKREKVDRFGFKRKYRTLDSVLYWIDVMRDEKLIP 385
|
|
| UNIPROTKB|Q4K649 PFL_5207 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 94/348 (27%), Positives = 155/348 (44%)
Query: 17 PGGPWKVYGTARR-PPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR 75
PG W++ ARR PP S S +I+ D LD T + + + VT L + +
Sbjct: 58 PG--WQLTTAARRRPPTSLLDGSPAPAHISADLLDVAGTARAFAGLGS-VTDLVFCAYSE 114
Query: 76 LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIG- 134
+S ++ N M ++ + + + +RLR V L+ G K Y G+ +G
Sbjct: 115 RESMAATVAPNLAMLEHSLKAL---RQAGARLRQVVLIGGGKSY----------GEHLGS 161
Query: 135 HDPPFKEDSLRLPFPNFYYAVEDIA--ASYSPAVTYSVHXXXXXXXXXXXXXXXXXXXXA 192
+ P KE R P FY ED+ + ++V A
Sbjct: 162 YKTPAKESDPRFMGPIFYNDQEDLLWHEAEREGFAWTVLRPDGVMGPSLNSPMNILTGIA 221
Query: 193 VYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVF 252
+A I + LP R+ G+ W +DSRVLA+ +WA T+ A+ Q FN TNGD F
Sbjct: 222 SFAAISQALNLPLRFPGSLQAWSALHQATDSRVLAQAVLWALTSPNAQQQVFNVTNGDHF 281
Query: 253 TWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFE 312
W+ LW ++ F + + + M +K +W IV++ L T E+I +
Sbjct: 282 RWQHLWPQIAGFFGLASAA---PQPMNLGVQMADKAPLWARIVQEQQLRPTPWEQIAAWP 338
Query: 313 ALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360
++ L+ + V S K R+ GF G D+ +S+ +++LR+ ++IP
Sbjct: 339 FVDGWLNTGYDMVQSTIKIRQAGFTGCIDSHQSVLEQLQRLRDYRLIP 386
|
|
| ASPGD|ASPL0000051603 AN9028 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 103/385 (26%), Positives = 174/385 (45%)
Query: 1 MAGLSLAEALKNNPTIPGGPW-KVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLS 59
+ G ++ E L N T W ++ T+R P + S V+ F ALD ++ +KL+
Sbjct: 13 ITGSAILEYLVKNTT--ASEWERIIITSRSPLKTAVNDSRVE----FIALDFSNPPEKLA 66
Query: 60 SI--SQ--EVTHLFWVMFQRLKS-EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLM 114
SQ +VTH ++ + E+N +N S +F+N ++ +VD KG L++ TL
Sbjct: 67 DQMRSQCADVTHAYFSSYVHKDDFAELNEANRS-LFENFLNALVDVAKG---LQNCTLQT 122
Query: 115 GTKHY---MGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYSPAVTYS-- 169
G K+Y + PV P+ G H + + NFYY ED A ++
Sbjct: 123 GGKYYNVHVRPVPWPAHEG----HPRLVRAEE------NFYYHQEDFLAEKQRGSNWTWN 172
Query: 170 -VHXXXXXXXXXXXXXXXXXXXXAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAE 228
+ A+Y I + G+ N + D+SD+R++A+
Sbjct: 173 VIRPEAIIGYTTKPNGMNEALTIALYFLINKELGVEAPMPTNAAYFNGVDDVSDARLIAD 232
Query: 229 QQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVE------F--VPFDEKEK--- 277
I+A+T N+AFN TNGDVF+W+ +W L++ F + F F E E
Sbjct: 233 LTIYASTHKNCANEAFNVTNGDVFSWRYMWPRLADWFGAKASSNQSFNRTSFKEGETHLD 292
Query: 278 FDAVEMMKEKGEIWDEIVEKHG--LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFG 335
+ + ++K E+W+ + +K G L K + T + + V + S+NK+R+FG
Sbjct: 293 LNLEQWAQDKREVWNRLCDKAGSPLSKASFDAGT-WTFQDWVFQRTWSSPLSINKARKFG 351
Query: 336 FFGFADTMKSIRTWVKKLREMKIIP 360
+ G D+ S K+ +E+ IP
Sbjct: 352 WTGHLDSFDSFVDAFKRFKELGQIP 376
|
|
| POMBASE|SPCC757.02c SPCC757.02c "epimarase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 200 (75.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 67/247 (27%), Positives = 105/247 (42%)
Query: 35 FPSSHVDHYITFDALDSTDTTQKLSSISQE-VTHLFWVMFQRLKSEEINISNNSTMFKN- 92
+P H I + D +K S + + + ++ ++ +EE N M +N
Sbjct: 45 YPRKIKHHSIDLLNEEPKDIAKKFSLEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNF 104
Query: 93 VMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP-PFKEDSLRLP--F- 148
V ++ + S + LR V L G K Y G +G P E +R+P F
Sbjct: 105 VQALELTSIQ---TLRRVILTTGLKFY----------GLHLGEVRLPMIETDIRVPETFS 151
Query: 149 --PNFYYAVEDIAASYSPAVT--YSVHXXXXXXXXXXXXXXXXXXXXAVYATICRHQGLP 204
PNFYY EDI +S Y++ A+YA +CR P
Sbjct: 152 GTPNFYYVQEDILKEFSNGKKWDYTIAMPNDICGVSKGSYMNEAFTIALYALVCRELHEP 211
Query: 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEI 264
FR+ GN+ + F D+S S+++A+ Q+W + FN NGD+ +W W ++E
Sbjct: 212 FRFPGNEKFYLGFDDISYSKLIADFQLWMTFKAECSEEKFNIVNGDIHSWSRTWPKIAEY 271
Query: 265 FDVEFVP 271
F VE VP
Sbjct: 272 FGVE-VP 277
|
|
| ASPGD|ASPL0000040978 AN2921 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 188 (71.2 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 77/281 (27%), Positives = 114/281 (40%)
Query: 21 W-KVYGTARRPPPSWF------PSSHVDHYITFDALDST-DTTQKLSSISQEVTHLFWVM 72
W K+Y +RR PS F ++ V+H I D L T + +L +V ++F+
Sbjct: 54 WSKIYCLSRRAAPSNFFTDLGDGAARVEH-IPVDFLSETAEIASRLREDIPKVDYVFFFS 112
Query: 73 FQRLKSE----------EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGP 122
+ + + E E NSTM N + + ++N R T G KHY G
Sbjct: 113 YMQPEQEGNVLGMWSDAEALTKVNSTMLNNFLGALQEANLHPKRFLIQT---GAKHY-GF 168
Query: 123 VFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASY--SPAVTYSVHXXXXXXXXX 180
PS +P F+ D NFYY ED A+Y V ++V
Sbjct: 169 HIGPST-------NPSFETDRRVSLEQNFYYLQEDALAAYCAGTGVGWNVVRPSYIIGAV 221
Query: 181 XXXXXXXXXXXAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 240
A+YA I H P + G+ W+ S + + A + WA T A+
Sbjct: 222 RDGALNHMIGLAIYAAIQAHLNQPLYFPGDYIAWDREVCQSTALLNAYFEEWAVLTPDAE 281
Query: 241 NQAFNCTNGDVFTWKSLWKLLSEIFDVEF-VPFDEKEKFDA 280
NQAFN +G FTW W L+E + + P E+ K+ A
Sbjct: 282 NQAFNIQDGLPFTWGRFWPNLAEWYGTTWKAPEVERAKYRA 322
|
|
| ASPGD|ASPL0000017248 AN4177 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 129 (50.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 67/259 (25%), Positives = 98/259 (37%)
Query: 22 KVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQK-LSSISQEVTHLFWVMFQRLKSEE 80
K+Y +R P + + H D S D K LS IS E + M +E
Sbjct: 29 KIYALSRSDPG--YKDPKLQH-AAIDLQGSADDMAKTLSGISAEYVYFCAYMAHDDPAEL 85
Query: 81 INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHY---MG----PVF--DPSLVGQ 131
I N TM N + + + S+L+ L G K Y +G P DP L G+
Sbjct: 86 CRI--NGTMISNFIQAL-EKTGAISKLKRFILTCGFKQYSVHLGNAKQPFHEEDPVLEGE 142
Query: 132 LIGHDPPFKEDSLRLPFPNFYYAVEDI---AASYSPAV-TYSVHXXXXXXXXXXXXXXXX 187
+ G P PNFY+ + I AA+ S + V
Sbjct: 143 VGGETWP----------PNFYFTQQRILAEAAARSEGQWDWVVTLPQDVLGFARGNFMNE 192
Query: 188 XXXXAVYATICRH-QGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNC 246
+Y T+ + G + G K + F + + + A+ +WAAT A N FN
Sbjct: 193 ATAVGLYCTVSKVLPGSELPFPGCKAGYFAFNTWTSANLHAKFCLWAATAKGAGNNIFNV 252
Query: 247 TNGDVFTWKSLWKLLSEIF 265
NGD +W+ LW L+ F
Sbjct: 253 INGDTESWQDLWPRLARRF 271
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9STX2 | VEP1_ARATH | 1, ., 3, ., 1, ., 3 | 0.4398 | 0.9611 | 0.8917 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 360 | |||
| cd08948 | 308 | cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta | 5e-95 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 3e-07 |
| >gnl|CDD|187652 cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 284 bits (730), Expect = 5e-95
Identities = 118/309 (38%), Positives = 159/309 (51%), Gaps = 24/309 (7%)
Query: 3 GLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTT--QKLSS 60
G +L E L ++P G WKVYG +RRP P+ V+H I D LD DT KL
Sbjct: 12 GWALVEHLLSDP---GTWWKVYGLSRRPLPTEDDPRLVEH-IGIDLLDPADTVLRAKLPG 67
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
+ ++VTH+F+ + E + N M +N + + L+HV L GTKHY
Sbjct: 68 L-EDVTHVFYAAYIERPDEAELVEVNGAMLRNFLDAL---EPASPNLKHVVLQTGTKHYG 123
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYS--PAVTYSVHRSSIIIG 178
+ + + P +ED RL PNFYY ED+ + T+SV R IIG
Sbjct: 124 VHLGPF----KTPRPEEPAREDPPRLLPPNFYYDQEDLLFEAAKGKGWTWSVLRPDAIIG 179
Query: 179 ASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR 238
+ + N LTLAVYA ICR G P R+ G+ W D +D+R+LA IWAAT
Sbjct: 180 FAPGNAMNLALTLAVYAAICRELGAPLRFPGSPAAWNALSDATDARLLARFTIWAATHPE 239
Query: 239 AKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAV------EMMKEKG--EI 290
A N+AFN TNGDVF WK LW L+E F +E P + + + A E+M + G
Sbjct: 240 AANEAFNVTNGDVFRWKELWPRLAEYFGLEGAPPEPEAEAGADKAPVWEELMADHGLQAA 299
Query: 291 WDEIVEKHG 299
WDE+VE+HG
Sbjct: 300 WDELVERHG 308
|
5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 3e-07
Identities = 26/176 (14%), Positives = 46/176 (26%), Gaps = 32/176 (18%)
Query: 3 GLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSIS 62
G +LA L +V R + D D LS
Sbjct: 11 GRALARELLE------QGHEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDS----LSDAV 60
Query: 63 QEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGP 122
Q V + + + + + +NV+ ++ ++H + Y
Sbjct: 61 QGVDVVIHLAGAPRDTRDFCEV-DVEGTRNVLEAAKEAG-----VKHFIFISSLGAY--- 111
Query: 123 VFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIG 178
G E S P+ E + S Y++ R +I G
Sbjct: 112 -----------GDLHEETEPSPSSPYLAVKAKTEAVLREASL--PYTIVRPGVIYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.97 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.96 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.96 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.96 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.96 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.96 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.96 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.95 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.95 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.94 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.94 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.94 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.94 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.93 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.92 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.92 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.89 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.88 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.87 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.87 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.85 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.85 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.82 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.82 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.81 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.8 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.78 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.76 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.69 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.68 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.67 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.63 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.6 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.6 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.58 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.58 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.57 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.55 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.55 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.54 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.52 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.51 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.5 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.48 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.48 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.46 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.42 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.42 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.42 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.41 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.4 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.39 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.39 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.39 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.38 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.38 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.37 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.37 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.35 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.35 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.35 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.34 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.34 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.32 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.32 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.31 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.31 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.31 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.29 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.29 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.27 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.26 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.26 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.24 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.24 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.23 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.23 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.22 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.21 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.21 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.21 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.21 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.2 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.2 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.19 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.19 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.18 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.18 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.17 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.17 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.14 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.11 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.11 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.11 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.1 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.09 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.09 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.08 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.07 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.07 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.06 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.06 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.06 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.05 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.05 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.05 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.05 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.03 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.03 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.01 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.0 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.99 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.99 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.98 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.98 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.97 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.97 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.96 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.96 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.95 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.93 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.91 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 98.9 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.9 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.82 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.81 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.81 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.81 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.8 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.79 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.79 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.76 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.76 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.73 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.73 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.72 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.69 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.68 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.68 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.67 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.64 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 98.64 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.61 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.61 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.6 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.59 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.57 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.56 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.54 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.54 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.54 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.51 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.5 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.48 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.44 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.42 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.42 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.42 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.41 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.37 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.34 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.33 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.33 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 98.33 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 98.32 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.3 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.3 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 98.29 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.2 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.13 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 98.12 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.11 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 98.1 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.97 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.95 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 97.85 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.78 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 97.61 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 97.6 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.6 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 97.59 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 97.56 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.52 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.49 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.45 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 97.35 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.24 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 97.19 | |
| PLN00106 | 323 | malate dehydrogenase | 97.08 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 96.93 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 96.87 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 96.8 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 96.47 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 96.25 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 95.63 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 95.31 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 95.21 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 95.21 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 94.0 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 93.66 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 93.15 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 92.36 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 91.21 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 89.7 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 87.87 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 87.84 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 87.12 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 85.97 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 83.85 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 82.79 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 80.9 |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=309.06 Aligned_cols=284 Identities=14% Similarity=0.101 Sum_probs=221.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR--- 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~--- 75 (360)
.||||.|.+|++ .|++|+++|+-..... .....++ +++|||+|.+.|.+.++... +|.|+|.|+..
T Consensus 11 YIGSHtv~~Ll~------~G~~vvV~DNL~~g~~~~v~~~~~~-f~~gDi~D~~~L~~vf~~~~--idaViHFAa~~~Vg 81 (329)
T COG1087 11 YIGSHTVRQLLK------TGHEVVVLDNLSNGHKIALLKLQFK-FYEGDLLDRALLTAVFEENK--IDAVVHFAASISVG 81 (329)
T ss_pred hhHHHHHHHHHH------CCCeEEEEecCCCCCHHHhhhccCc-eEEeccccHHHHHHHHHhcC--CCEEEECccccccc
Confidence 489999999999 9999999998644321 1111168 99999999999999999876 89999999842
Q ss_pred --CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcH
Q 037566 76 --LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYY 153 (360)
Q Consensus 76 --~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y 153 (360)
..+|-++++.||.||.+||++|+++ +|++|||.||++|||.+ ...|++|++|.. |.++|
T Consensus 82 ESv~~Pl~Yy~NNv~gTl~Ll~am~~~-----gv~~~vFSStAavYG~p------------~~~PI~E~~~~~--p~NPY 142 (329)
T COG1087 82 ESVQNPLKYYDNNVVGTLNLIEAMLQT-----GVKKFIFSSTAAVYGEP------------TTSPISETSPLA--PINPY 142 (329)
T ss_pred hhhhCHHHHHhhchHhHHHHHHHHHHh-----CCCEEEEecchhhcCCC------------CCcccCCCCCCC--CCCcc
Confidence 2378899999999999999999998 89999999999999975 358999999976 57789
Q ss_pred HHHHHHHh-------cCCCCcEEEEcCCCeeecCCC-------CcchhHHHHHHHHHHHhhcCCCeeeeCCcc---cccc
Q 037566 154 AVEDIAAS-------YSPAVTYSVHRSSIIIGASSR-------SLNNSLLTLAVYATICRHQGLPFRYLGNKY---TWEH 216 (360)
Q Consensus 154 ~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~---~~~~ 216 (360)
|.+|++.| ...+|.++++|.+|+.|.-+. +..+.+.++....++.| ...+.+.|+.- .-..
T Consensus 143 G~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~--r~~l~ifG~DY~T~DGT~ 220 (329)
T COG1087 143 GRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGK--RDKLFIFGDDYDTKDGTC 220 (329)
T ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcC--CceeEEeCCCCCCCCCCe
Confidence 99999888 467899999999999997432 12344555544444322 23355566521 1247
Q ss_pred cccccCHHHHHHHHHHHHcCCCCC--CCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHH
Q 037566 217 FCDMSDSRVLAEQQIWAATTDRAK--NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEI 294 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~~~~--g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (360)
++|.+||.|||+|+++|++.-... .++||+++|..+|..|+++...+..|.+.+.- +
T Consensus 221 iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~-------~-------------- 279 (329)
T COG1087 221 IRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVE-------I-------------- 279 (329)
T ss_pred eeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCcee-------e--------------
Confidence 899999999999999997632222 36999999999999999999999999766521 0
Q ss_pred HHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCccc-ccHHHHHHHHHHHH
Q 037566 295 VEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFA-DTMKSIRTWVKKLR 354 (360)
Q Consensus 295 ~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~-~~~~~l~~~~~~~~ 354 (360)
. +..+.+ .-.++.|.+|||+ |||+|++ ++++.++++.+|.+
T Consensus 280 ~---~RR~GD----------------pa~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~ 322 (329)
T COG1087 280 A---PRRAGD----------------PAILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQ 322 (329)
T ss_pred C---CCCCCC----------------CceeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhh
Confidence 0 000111 1146899999976 8999999 99999999999997
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=300.98 Aligned_cols=290 Identities=13% Similarity=0.095 Sum_probs=225.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCC----C---CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPP----S---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~----~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
||||+.+++++++ + ..++|++++.-.-. . ....++.. |++|||.|.+.+.+.++..+ +|+|+|+|+
T Consensus 11 FIGsnfvr~~~~~-~---~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~-fv~~DI~D~~~v~~~~~~~~--~D~VvhfAA 83 (340)
T COG1088 11 FIGSNFVRYILNK-H---PDDHVVNLDKLTYAGNLENLADVEDSPRYR-FVQGDICDRELVDRLFKEYQ--PDAVVHFAA 83 (340)
T ss_pred hHHHHHHHHHHhc-C---CCceEEEEecccccCCHHHHHhhhcCCCce-EEeccccCHHHHHHHHHhcC--CCeEEEech
Confidence 7999999999971 1 22568888864311 0 12347899 99999999999999999765 799999998
Q ss_pred ec-----CCChhHhhhhhHHHHHHHHHHHHhhccCCCCc-cEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 74 QR-----LKSEEINISNNSTMFKNVMSVVVDSNKGRSRL-RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 74 ~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v-~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
-+ ..+|+.+.++|+.||.+||||+++. .. -||+++|+-.|||.-. . ....++|++|..|
T Consensus 84 ESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~-----~~~frf~HISTDEVYG~l~-------~---~~~~FtE~tp~~P 148 (340)
T COG1088 84 ESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY-----WGKFRFHHISTDEVYGDLG-------L---DDDAFTETTPYNP 148 (340)
T ss_pred hccccccccChhhhhhcchHHHHHHHHHHHHh-----cccceEEEecccccccccc-------C---CCCCcccCCCCCC
Confidence 43 2378899999999999999999997 33 4899999999999631 1 2336899999874
Q ss_pred CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccc
Q 037566 148 FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDM 220 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~ 220 (360)
+++|+++|..++ +.+|++++|.|++|-|||.+- .-.+.|+.+..++ .|.++++.|+|. +++|+
T Consensus 149 --sSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqf--pEKlIP~~I~nal---~g~~lpvYGdG~---~iRDW 218 (340)
T COG1088 149 --SSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQF--PEKLIPLMIINAL---LGKPLPVYGDGL---QIRDW 218 (340)
T ss_pred --CCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcC--chhhhHHHHHHHH---cCCCCceecCCc---ceeee
Confidence 778998887766 578999999999999999753 2334444444333 688999999998 89999
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCC
Q 037566 221 SDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGL 300 (360)
Q Consensus 221 ~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (360)
++|.|.|+|+-..+.+ +..||+|||+++...+-.|+++.|.+++|...+... .+..++. .+.
T Consensus 219 l~VeDh~~ai~~Vl~k-g~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~-----~li~~V~----------DRp-- 280 (340)
T COG1088 219 LYVEDHCRAIDLVLTK-GKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYR-----DLITFVE----------DRP-- 280 (340)
T ss_pred EEeHhHHHHHHHHHhc-CcCCceEEeCCCccchHHHHHHHHHHHhCccccchh-----hheEecc----------CCC--
Confidence 9999999998877654 566999999999999999999999999997654210 0000011 000
Q ss_pred CccCcccccccchhhhhhccccccccchhHH-HHcCCCcccccHHHHHHHHHHHHHCCC
Q 037566 301 YKTKMEEITCFEALNTVLHLQFQHVSSMNKS-REFGFFGFADTMKSIRTWVKKLREMKI 358 (360)
Q Consensus 301 ~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Ka-r~lG~~p~~~~~~~l~~~~~~~~~~g~ 358 (360)
+...+...|.+|+ ++|||.|++++++||++|++||.++.|
T Consensus 281 ------------------GHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~~ 321 (340)
T COG1088 281 ------------------GHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNEW 321 (340)
T ss_pred ------------------CCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhchH
Confidence 1233568899998 569999999999999999999998765
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=311.46 Aligned_cols=286 Identities=16% Similarity=0.108 Sum_probs=212.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---C---------CCCCCceeeEeeccCChHHHHHHHccCCCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---W---------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~---------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V 68 (360)
|||+||+++|++ +|++|++++|..... . ....+++ ++.+||+|.+.+.+++++ +|+|
T Consensus 26 fiG~~lv~~L~~------~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Di~d~~~l~~~~~~----~d~V 94 (348)
T PRK15181 26 FIGSGLLEELLF------LNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI-FIQGDIRKFTDCQKACKN----VDYV 94 (348)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCCCcchhhhhhhhhccccccCCceE-EEEccCCCHHHHHHHhhC----CCEE
Confidence 689999999999 899999999864321 0 0013578 999999999999999887 5899
Q ss_pred EEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 69 FWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 69 ~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
||+|+... .++..+.++|+.||.|||++|++. ++++|||+||++|||.. ...+..|++
T Consensus 95 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~e~~ 157 (348)
T PRK15181 95 LHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-----HVSSFTYAASSSTYGDH------------PDLPKIEER 157 (348)
T ss_pred EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeechHhhCCC------------CCCCCCCCC
Confidence 99998532 256678999999999999999986 79999999999999852 234567777
Q ss_pred CCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc--chhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 144 LRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL--NNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+.. |.+.|+.+|..+| +..+++++++||++||||++... ...+.+..+..+ ..+.++.+.|++.
T Consensus 158 ~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~---~~~~~i~~~g~g~-- 230 (348)
T PRK15181 158 IGR--PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSL---LKDEPIYINGDGS-- 230 (348)
T ss_pred CCC--CCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHH---HcCCCcEEeCCCC--
Confidence 654 4667999998887 34689999999999999986421 112222222222 2356777778876
Q ss_pred cccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHH
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWD 292 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
..+|++|++|+|+++++++..+. ..|++|||++|+++|++|+++.+++.++...... .....
T Consensus 231 -~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~---~~~~~------------ 294 (348)
T PRK15181 231 -TSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQ---SRAEP------------ 294 (348)
T ss_pred -ceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccc---cCCCc------------
Confidence 56899999999999988775432 3579999999999999999999999998532210 00000
Q ss_pred HHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 293 EIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 293 ~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
...+.... + .....+|++|+++ +||+|+++++|+|+++++|++++
T Consensus 295 ------~~~~~~~~--------~-----~~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~ 340 (348)
T PRK15181 295 ------IYKDFRDG--------D-----VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK 340 (348)
T ss_pred ------ccCCCCCC--------c-----ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 00000000 0 1135789999987 79999999999999999999764
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=290.01 Aligned_cols=283 Identities=14% Similarity=0.130 Sum_probs=206.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC--CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF--PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
|||++|+++|++ +|++|++++|+.... .. ...+++ ++.+|++|++++.+++++ +|+|||+|
T Consensus 21 fIG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~Vih~A 89 (342)
T PLN02214 21 YIASWIVKILLE------RGYTVKGTVRNPDDPKNTHLRELEGGKERLI-LCKADLQDYEALKAAIDG----CDGVFHTA 89 (342)
T ss_pred HHHHHHHHHHHH------CcCEEEEEeCCchhhhHHHHHHhhCCCCcEE-EEecCcCChHHHHHHHhc----CCEEEEec
Confidence 589999999999 899999999975421 01 113588 899999999999999998 58999999
Q ss_pred eecCCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccC-ccccccccCCcccCCcCCCCCCCCCCCCCC----C
Q 037566 73 FQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGT-KHYMGPVFDPSLVGQLIGHDPPFKEDSLRL----P 147 (360)
Q Consensus 73 ~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~-~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~----p 147 (360)
+....++.+.+++|+.||.|++++|++. +++||||+||+ ++||.+.. ....+++|+++.. .
T Consensus 90 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~-----~v~r~V~~SS~~avyg~~~~---------~~~~~~~E~~~~~~~~~~ 155 (342)
T PLN02214 90 SPVTDDPEQMVEPAVNGAKFVINAAAEA-----KVKRVVITSSIGAVYMDPNR---------DPEAVVDESCWSDLDFCK 155 (342)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeccceeeeccCCC---------CCCcccCcccCCChhhcc
Confidence 8655677888999999999999999986 78999999995 68985310 0123578886311 1
Q ss_pred CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccc
Q 037566 148 FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDM 220 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~ 220 (360)
.|.+.|+.+|..+| +..+++++++||++||||++....+... ..+...+ .+.... .|+ ..+|+
T Consensus 156 ~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~-~~~~~~~---~g~~~~-~~~-----~~~~~ 225 (342)
T PLN02214 156 NTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASL-YHVLKYL---TGSAKT-YAN-----LTQAY 225 (342)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchH-HHHHHHH---cCCccc-CCC-----CCcCe
Confidence 24667999998887 3458999999999999998642211111 1111111 233222 233 34799
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCC
Q 037566 221 SDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGL 300 (360)
Q Consensus 221 ~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (360)
+|++|+|+++++|++++. .++.||+++ ..++++|+++.|++.++.. . .|... ...
T Consensus 226 i~V~Dva~a~~~al~~~~-~~g~yn~~~-~~~~~~el~~~i~~~~~~~-~-----~~~~~-----------------~~~ 280 (342)
T PLN02214 226 VDVRDVALAHVLVYEAPS-ASGRYLLAE-SARHRGEVVEILAKLFPEY-P-----LPTKC-----------------KDE 280 (342)
T ss_pred eEHHHHHHHHHHHHhCcc-cCCcEEEec-CCCCHHHHHHHHHHHCCCC-C-----CCCCC-----------------ccc
Confidence 999999999999987654 456899987 4789999999999998521 1 11110 000
Q ss_pred CccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCCC
Q 037566 301 YKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360 (360)
Q Consensus 301 ~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~ip 360 (360)
.++. .....+|++|+++|||+| ++++|+|+++++||++.|++|
T Consensus 281 ~~~~----------------~~~~~~d~~k~~~LG~~p-~~lee~i~~~~~~~~~~~~~~ 323 (342)
T PLN02214 281 KNPR----------------AKPYKFTNQKIKDLGLEF-TSTKQSLYDTVKSLQEKGHLA 323 (342)
T ss_pred cCCC----------------CCccccCcHHHHHcCCcc-cCHHHHHHHHHHHHHHcCCCC
Confidence 0000 013468999999899999 699999999999999999986
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=294.47 Aligned_cols=299 Identities=12% Similarity=0.083 Sum_probs=204.3
Q ss_pred CchHHHHHHHhcCCCCCCC-CcEEEEEecCCCCC-C-------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGG-PWKVYGTARRPPPS-W-------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~~-~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
|||+||+++|++ + |++|++++|++... . ....+++ ++.+|++|.+++.+++++ +|+|||+
T Consensus 25 fIGs~lv~~L~~------~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~----~d~ViHl 93 (386)
T PLN02427 25 FIGSHLCEKLMT------ETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQ-FHRINIKHDSRLEGLIKM----ADLTINL 93 (386)
T ss_pred hHHHHHHHHHHh------cCCCEEEEEecCchhhhhhhccccccCCCCeE-EEEcCCCChHHHHHHhhc----CCEEEEc
Confidence 699999999998 6 69999999864321 0 0124699 999999999999999987 4899999
Q ss_pred eeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC-------
Q 037566 72 MFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF------- 139 (360)
Q Consensus 72 A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~------- 139 (360)
|+... .++.+.+..|+.||.|++++|++. + +||||+||+++||... +...+...|.
T Consensus 94 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-----~-~r~v~~SS~~vYg~~~------~~~~~e~~p~~~~~~~~ 161 (386)
T PLN02427 94 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-----N-KRLIHFSTCEVYGKTI------GSFLPKDHPLRQDPAFY 161 (386)
T ss_pred ccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-----C-CEEEEEeeeeeeCCCc------CCCCCcccccccccccc
Confidence 98532 234566779999999999999875 4 8999999999998531 1000011121
Q ss_pred --CCCCCCC---C--CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC---------cchhHHHHHHHHH
Q 037566 140 --KEDSLRL---P--FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS---------LNNSLLTLAVYAT 196 (360)
Q Consensus 140 --~E~~p~~---p--~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~---------~~~~~~~~~~~~~ 196 (360)
+|+.++. | .|.+.|+.+|..+| +..+++++++||++||||++.. ....+....+. .
T Consensus 162 ~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~-~ 240 (386)
T PLN02427 162 VLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN-N 240 (386)
T ss_pred cccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHH-H
Confidence 2222111 1 23457999998887 2468999999999999997521 11111111111 1
Q ss_pred HHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC-CCCCceeccCC-CcccHHHHHHHHHHHhCCCccCCCc
Q 037566 197 ICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR-AKNQAFNCTNG-DVFTWKSLWKLLSEIFDVEFVPFDE 274 (360)
Q Consensus 197 ~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~-~~g~~yni~~g-~~~s~~el~~~ia~~~g~~~~~~~~ 274 (360)
+ ..+.++.+.|++. ..+|++|++|+|++++.++.++. ..|++|||+++ +.+|++|+++.+.+.+|.....+.
T Consensus 241 ~--~~~~~~~~~g~g~---~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~- 314 (386)
T PLN02427 241 L--LRREPLKLVDGGQ---SQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPA- 314 (386)
T ss_pred H--hcCCCeEEECCCC---ceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcccccccc-
Confidence 1 2456777777765 56799999999999999887653 35789999998 599999999999999985221110
Q ss_pred CCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHH
Q 037566 275 KEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKL 353 (360)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~ 353 (360)
..... . . ....+... ..+.| ...+.+|++|+++ |||+|+++++++|+++++|+
T Consensus 315 -~~~~~---~-~-------------~~~~~~~~---~~~~~-----~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~ 368 (386)
T PLN02427 315 -LEEPT---V-D-------------VSSKEFYG---EGYDD-----SDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQ 368 (386)
T ss_pred -ccccc---c-c-------------cCcccccC---ccccc-----hhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHH
Confidence 00000 0 0 00000000 00001 1245789999987 79999999999999999999
Q ss_pred HH
Q 037566 354 RE 355 (360)
Q Consensus 354 ~~ 355 (360)
++
T Consensus 369 ~~ 370 (386)
T PLN02427 369 HK 370 (386)
T ss_pred HH
Confidence 76
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=285.84 Aligned_cols=299 Identities=15% Similarity=0.091 Sum_probs=210.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---C---C-------CCCCceeeEeeccCChHHHHHHHccCCCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---W---F-------PSSHVDHYITFDALDSTDTTQKLSSISQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~---~-------~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~ 67 (360)
|||++|+++|++ +|++|++++|++... . . ...+++ ++.+||+|.+++.+++++++ +|+
T Consensus 11 fIG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~~~--~d~ 81 (343)
T TIGR01472 11 QDGSYLAEFLLE------KGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMK-LHYGDLTDSSNLRRIIDEIK--PTE 81 (343)
T ss_pred cHHHHHHHHHHH------CCCEEEEEecCCcccchhhhhhhhhcccccccccee-EEEeccCCHHHHHHHHHhCC--CCE
Confidence 699999999999 899999999875320 0 0 023588 99999999999999999875 799
Q ss_pred EEEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCc---cEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 68 LFWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRL---RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 68 V~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v---~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|||+|+... .++....++|+.||.||+++|.+. ++ ++|||+||+++||.. ...|.
T Consensus 82 ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-----~~~~~~~~v~~SS~~vyg~~------------~~~~~ 144 (343)
T TIGR01472 82 IYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-----GLIKSVKFYQASTSELYGKV------------QEIPQ 144 (343)
T ss_pred EEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-----CCCcCeeEEEeccHHhhCCC------------CCCCC
Confidence 999998532 134566789999999999999886 44 489999999999953 23468
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcCC-CeeeeCC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGL-PFRYLGN 210 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~G~ 210 (360)
+|+.|.. |.+.|+.+|..+| ...++++++.|++++|||+.+. ........ ....+ ..+. +..+.|+
T Consensus 145 ~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~g~ 219 (343)
T TIGR01472 145 NETTPFY--PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITR-AAAKI--KLGLQEKLYLGN 219 (343)
T ss_pred CCCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHH-HHHHH--HcCCCCceeeCC
Confidence 8988765 4677999999888 2358999999999999997532 12111111 11111 1243 3345577
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCC-HHHHHHHhhH
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFD-AVEMMKEKGE 289 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~-~~~~~~~~~~ 289 (360)
+. +.+|++|++|+|+++++++.++ .+++|||++|+++|++|+++.+++.+|.+.... ..++. ........
T Consensus 220 g~---~~rd~i~V~D~a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~-- 290 (343)
T TIGR01472 220 LD---AKRDWGHAKDYVEAMWLMLQQD--KPDDYVIATGETHSVREFVEVSFEYIGKTLNWK--DKGINEVGRCKETG-- 290 (343)
T ss_pred Cc---cccCceeHHHHHHHHHHHHhcC--CCccEEecCCCceeHHHHHHHHHHHcCCCcccc--cccccccccccccC--
Confidence 76 6789999999999999888654 246899999999999999999999999654210 00000 00000000
Q ss_pred HHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 290 IWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
.+. ..+....... .| .....+|++|+++ +||+|+++++|||+++++++++
T Consensus 291 ---~~~--~~~~~~~~~~------~~-----~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 291 ---KVH--VEIDPRYFRP------TE-----VDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred ---cee--EEeCccccCC------Cc-----cchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 000 0000000000 01 1134789999986 7999999999999999999875
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=295.81 Aligned_cols=289 Identities=14% Similarity=0.109 Sum_probs=204.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCC---CC------C-C--------------CCCCceeeEeeccCChHHHHH
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPP---PS------W-F--------------PSSHVDHYITFDALDSTDTTQ 56 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~---~~------~-~--------------~~~~v~~~v~gDl~d~~~l~~ 56 (360)
|||+||+++|++ +|++|++++|... .. . + ...+++ ++.+||+|++++.+
T Consensus 58 fIGs~Lv~~L~~------~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-~v~~Dl~d~~~v~~ 130 (442)
T PLN02572 58 YCGWATALHLSK------RGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIE-LYVGDICDFEFLSE 130 (442)
T ss_pred HHHHHHHHHHHH------CCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcce-EEECCCCCHHHHHH
Confidence 699999999999 8999999875321 10 0 0 013688 99999999999999
Q ss_pred HHccCCCCccEEEEeeeecCC-----C---hhHhhhhhHHHHHHHHHHHHhhccCCCCcc-EEEEeccCccccccccCCc
Q 037566 57 KLSSISQEVTHLFWVMFQRLK-----S---EEINISNNSTMFKNVMSVVVDSNKGRSRLR-HVTLLMGTKHYMGPVFDPS 127 (360)
Q Consensus 57 ~l~~~~~~v~~V~h~A~~~~~-----~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~-r~v~~SS~~vYg~~~~~~~ 127 (360)
++++.+ +|+|||+|+.... + ....+++|+.||.|++++|++. +++ +||++||++|||....
T Consensus 131 ~l~~~~--~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-----gv~~~~V~~SS~~vYG~~~~--- 200 (442)
T PLN02572 131 AFKSFE--PDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-----APDCHLVKLGTMGEYGTPNI--- 200 (442)
T ss_pred HHHhCC--CCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-----CCCccEEEEecceecCCCCC---
Confidence 999764 7999999974221 2 2345689999999999999987 675 9999999999995310
Q ss_pred ccCCcCCCCCCCC------CCCCCC-CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc-c-------
Q 037566 128 LVGQLIGHDPPFK------EDSLRL-PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL-N------- 185 (360)
Q Consensus 128 ~~g~~~~~~~p~~------E~~p~~-p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~-~------- 185 (360)
.. ...+++ |+++.. ..|.+.|+.+|+.+| +..|++++++||++||||++... +
T Consensus 201 ---~~--~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~ 275 (442)
T PLN02572 201 ---DI--EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINR 275 (442)
T ss_pred ---CC--cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccc
Confidence 00 011111 333222 245778999998877 34699999999999999986321 0
Q ss_pred -------hhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCCCCC--CceeccCCCcccHHH
Q 037566 186 -------NSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKN--QAFNCTNGDVFTWKS 256 (360)
Q Consensus 186 -------~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g--~~yni~~g~~~s~~e 256 (360)
.......+.. ...|.++.+.|++. ..+|++|++|+|++++.++..+...| ++||+++ +.+|++|
T Consensus 276 ~~~~~~~~~~i~~~~~~---~~~g~~i~v~g~G~---~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~e 348 (442)
T PLN02572 276 LDYDGVFGTALNRFCVQ---AAVGHPLTVYGKGG---QTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNE 348 (442)
T ss_pred cCcccchhhHHHHHHHH---HhcCCCceecCCCC---EEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHH
Confidence 0111111111 12466777778876 66899999999999999886543345 5899976 6799999
Q ss_pred HHHHHHHH---hCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH
Q 037566 257 LWKLLSEI---FDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE 333 (360)
Q Consensus 257 l~~~ia~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~ 333 (360)
+++.+++. +|.+.... ..|.+ .... + .....+|++|+++
T Consensus 349 l~~~i~~~~~~~g~~~~~~--~~p~~-------------------------~~~~------~-----~~~~~~d~~k~~~ 390 (442)
T PLN02572 349 LAKLVTKAGEKLGLDVEVI--SVPNP-------------------------RVEA------E-----EHYYNAKHTKLCE 390 (442)
T ss_pred HHHHHHHHHHhhCCCCCee--eCCCC-------------------------cccc------c-----ccccCccHHHHHH
Confidence 99999999 88653310 00000 0000 0 1135679999998
Q ss_pred cCCCccc---ccHHHHHHHHHHHHHC
Q 037566 334 FGFFGFA---DTMKSIRTWVKKLREM 356 (360)
Q Consensus 334 lG~~p~~---~~~~~l~~~~~~~~~~ 356 (360)
|||+|++ ++++++.+|++|||++
T Consensus 391 LGw~p~~~~~~l~~~l~~~~~~~~~~ 416 (442)
T PLN02572 391 LGLEPHLLSDSLLDSLLNFAVKYKDR 416 (442)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence 9999999 9999999999999864
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-36 Score=285.22 Aligned_cols=298 Identities=11% Similarity=0.077 Sum_probs=212.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEE-EecCCCC-C---C---CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYG-TARRPPP-S---W---FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~-l~r~~~~-~---~---~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+||++|+++|++ +|++|++ ++|.... . . ....+++ ++.+|++|++++.+++++.+ +|+|||+|
T Consensus 12 fIG~~l~~~L~~------~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~D~Vih~A 82 (355)
T PRK10217 12 FIGSALVRYIIN------ETSDAVVVVDKLTYAGNLMSLAPVAQSERFA-FEKVDICDRAELARVFTEHQ--PDCVMHLA 82 (355)
T ss_pred HHHHHHHHHHHH------cCCCEEEEEecCccccchhhhhhcccCCceE-EEECCCcChHHHHHHHhhcC--CCEEEECC
Confidence 689999999999 8987554 4443211 0 0 0123578 89999999999999998754 79999999
Q ss_pred eecC-----CChhHhhhhhHHHHHHHHHHHHhhcc----CCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRL-----KSEEINISNNSTMFKNVMSVVVDSNK----GRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~----~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+... .++.+++++|+.||.+++++|.+.++ ...++++||++||.++||... + ...|++|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~------~----~~~~~~E~~ 152 (355)
T PRK10217 83 AESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLH------S----TDDFFTETT 152 (355)
T ss_pred cccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCC------C----CCCCcCCCC
Confidence 8532 24567899999999999999976210 012578999999999998531 1 235688988
Q ss_pred CCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 144 LRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
+.. |.+.|+.+|..+| +..+++++++||++||||++.. .. ..+..+... ..+.++++.|++. +
T Consensus 153 ~~~--p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~-~~-~~~~~~~~~---~~~~~~~~~g~g~---~ 222 (355)
T PRK10217 153 PYA--PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP-EK-LIPLMILNA---LAGKPLPVYGNGQ---Q 222 (355)
T ss_pred CCC--CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc-cc-HHHHHHHHH---hcCCCceEeCCCC---e
Confidence 754 4677999998877 3468999999999999998632 11 111111111 2356667778876 5
Q ss_pred cccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHH
Q 037566 217 FCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVE 296 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (360)
.+|++|++|+|++++.++.. ...|++|||++++++|++|+++.+++.+|...+.. |.++... .. .+
T Consensus 223 ~~~~i~v~D~a~a~~~~~~~-~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~----~~~~~~~-~~------~~-- 288 (355)
T PRK10217 223 IRDWLYVEDHARALYCVATT-GKVGETYNIGGHNERKNLDVVETICELLEELAPNK----PQGVAHY-RD------LI-- 288 (355)
T ss_pred eeCcCcHHHHHHHHHHHHhc-CCCCCeEEeCCCCcccHHHHHHHHHHHhccccccc----ccccccc-cc------cc--
Confidence 68999999999999988765 34579999999999999999999999999644321 1111000 00 00
Q ss_pred HhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 297 KHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 297 ~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
...+.... + .....+|++|+++ |||+|+++++|+|+++++||+++
T Consensus 289 --~~~~~~~~--------~-----~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~ 334 (355)
T PRK10217 289 --TFVADRPG--------H-----DLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN 334 (355)
T ss_pred --eecCCCCC--------C-----CcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhC
Confidence 00000000 0 1135789999976 89999999999999999999875
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=306.66 Aligned_cols=297 Identities=13% Similarity=0.113 Sum_probs=212.3
Q ss_pred CchHHHHHHHhcCCCCCCC-CcEEEEEecCCCCC--CCCCCCceeeEeeccCChHH-HHHHHccCCCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGG-PWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTD-TTQKLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~-l~~~l~~~~~~v~~V~h~A~~~~ 76 (360)
|||+||+++|++ + ||+|++++|.+... ....++++ ++.+|++|..+ +.+++++ +|+|||+|+...
T Consensus 326 FIGs~Lv~~Ll~------~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~gDl~d~~~~l~~~l~~----~D~ViHlAa~~~ 394 (660)
T PRK08125 326 FIGNHLTERLLR------DDNYEVYGLDIGSDAISRFLGHPRFH-FVEGDISIHSEWIEYHIKK----CDVVLPLVAIAT 394 (660)
T ss_pred hHHHHHHHHHHh------CCCcEEEEEeCCchhhhhhcCCCceE-EEeccccCcHHHHHHHhcC----CCEEEECccccC
Confidence 699999999997 4 79999999976431 11234789 99999999765 5677876 589999998532
Q ss_pred -----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC---CC-
Q 037566 77 -----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR---LP- 147 (360)
Q Consensus 77 -----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~---~p- 147 (360)
.++.+.+++|+.||.|+++||+++ + +||||+||+++||.. ...+++|+++. .|
T Consensus 395 ~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-----~-~~~V~~SS~~vyg~~------------~~~~~~E~~~~~~~~p~ 456 (660)
T PRK08125 395 PIEYTRNPLRVFELDFEENLKIIRYCVKY-----N-KRIIFPSTSEVYGMC------------TDKYFDEDTSNLIVGPI 456 (660)
T ss_pred chhhccCHHHHHHhhHHHHHHHHHHHHhc-----C-CeEEEEcchhhcCCC------------CCCCcCccccccccCCC
Confidence 246678899999999999999986 5 799999999999852 23467888753 12
Q ss_pred -CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcc------hhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 148 -FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLN------NSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 148 -~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
.|.+.|+.+|..+| +.++++++++||++||||++.+.. ....+..+... ..+.++.+.|++.
T Consensus 457 ~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~---~~~~~i~~~g~g~- 532 (660)
T PRK08125 457 NKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNL---VEGSPIKLVDGGK- 532 (660)
T ss_pred CCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHh---cCCCCeEEeCCCc-
Confidence 24567999999888 346899999999999999864310 11111112211 1356777778776
Q ss_pred ccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC-cccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHH
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD-VFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEI 290 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~-~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
+.+|++|++|+|++++.++.++. ..|++|||++|+ .+|++|+++.+.+.+|.+.... ..|... ......
T Consensus 533 --~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~--~~~~~~--~~~~~~-- 604 (660)
T PRK08125 533 --QKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRD--HFPPFA--GFRVVE-- 604 (660)
T ss_pred --eeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccc--cCCccc--cccccc--
Confidence 67899999999999998887542 347899999986 7999999999999999643211 011100 000000
Q ss_pred HHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCC
Q 037566 291 WDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMK 357 (360)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g 357 (360)
+.. ..+ .. +.| ...+.+|++|+|+ |||+|+++++|+|+++++||++..
T Consensus 605 ~~~---~~~---~~--------~~~-----~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~ 653 (660)
T PRK08125 605 SSS---YYG---KG--------YQD-----VEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTV 653 (660)
T ss_pred ccc---ccc---cc--------ccc-----ccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence 000 000 00 001 1245789999986 799999999999999999999865
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=283.56 Aligned_cols=296 Identities=12% Similarity=0.138 Sum_probs=207.7
Q ss_pred CchHHHHHHHhcCCCCCCC-CcEEEEEecCCCCC--CCCCCCceeeEeeccC-ChHHHHHHHccCCCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGG-PWKVYGTARRPPPS--WFPSSHVDHYITFDAL-DSTDTTQKLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~-d~~~l~~~l~~~~~~v~~V~h~A~~~~ 76 (360)
|||++|+++|++ . |++|++++|+.... .....+++ ++.+|++ +.+.+.+++++ +|+|||+|+...
T Consensus 12 fiGs~l~~~L~~------~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~----~d~ViH~aa~~~ 80 (347)
T PRK11908 12 FIGHHLSKRILE------TTDWEVYGMDMQTDRLGDLVNHPRMH-FFEGDITINKEWIEYHVKK----CDVILPLVAIAT 80 (347)
T ss_pred HHHHHHHHHHHh------CCCCeEEEEeCcHHHHHHhccCCCeE-EEeCCCCCCHHHHHHHHcC----CCEEEECcccCC
Confidence 689999999997 5 79999999864321 11235689 9999998 66778788876 589999998532
Q ss_pred -----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC---C-
Q 037566 77 -----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL---P- 147 (360)
Q Consensus 77 -----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~---p- 147 (360)
.++...+++|+.||.||+++|++. + +||||+||+++||.. ...+++|+.+.. |
T Consensus 81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-----~-~~~v~~SS~~vyg~~------------~~~~~~ee~~~~~~~~~ 142 (347)
T PRK11908 81 PATYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFPSTSEVYGMC------------PDEEFDPEASPLVYGPI 142 (347)
T ss_pred hHHhhcCcHHHHHHHHHHHHHHHHHHHhc-----C-CeEEEEecceeeccC------------CCcCcCccccccccCcC
Confidence 256678899999999999999886 5 799999999999852 123566665321 1
Q ss_pred -CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc------chhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 148 -FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL------NNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 148 -~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
.|.+.|+.+|.++| ...+++++++||++||||++... ...+... +...+ ..+.++.+.|++.
T Consensus 143 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~-~~~~~--~~~~~~~~~~~g~- 218 (347)
T PRK11908 143 NKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQ-FLGHI--VRGEPISLVDGGS- 218 (347)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHH-HHHHH--hCCCceEEecCCc-
Confidence 35667999999887 34789999999999999985321 1111111 11111 1456666777665
Q ss_pred ccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC-CcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHH
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG-DVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEI 290 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g-~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
..+|++|++|+|++++.++.++. ..|++|||+++ ..+|++|+++.|++.+|...... ..+.++ .+..
T Consensus 219 --~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~--~~~~~~-~~~~----- 288 (347)
T PRK11908 219 --QKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYA--ESAKKV-KLVE----- 288 (347)
T ss_pred --eeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCccccc--cccccc-cccc-----
Confidence 56899999999999999887653 45899999987 48999999999999999542210 000000 0000
Q ss_pred HHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 291 WDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
......... ...+ ...+..|++|+++ |||+|+++++|+++++++|+++.
T Consensus 289 ---------~~~~~~~~~---~~~~-----~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~ 338 (347)
T PRK11908 289 ---------TTSGAYYGK---GYQD-----VQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGH 338 (347)
T ss_pred ---------CCchhccCc---Ccch-----hccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 000000000 0001 1245679999976 79999999999999999999764
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=277.75 Aligned_cols=237 Identities=19% Similarity=0.204 Sum_probs=184.4
Q ss_pred CchHHHHHHHhcCCCCCCCC--cEEEEEecCCCCCC---C-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGP--WKVYGTARRPPPSW---F-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~~~---~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
|||+|||++|++ +| ++|+++++.+.... . .....+ ++.+||+|++++.++++|+ |.|||+|+.
T Consensus 8 flG~~iv~~Ll~------~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~-~~~~Di~d~~~l~~a~~g~----d~V~H~Aa~ 76 (280)
T PF01073_consen 8 FLGSHIVRQLLE------RGYIYEVRVLDRSPPPKFLKDLQKSGVKE-YIQGDITDPESLEEALEGV----DVVFHTAAP 76 (280)
T ss_pred HHHHHHHHHHHH------CCCceEEEEcccccccccchhhhccccee-EEEeccccHHHHHHHhcCC----ceEEEeCcc
Confidence 689999999999 88 78999998765432 1 123456 8999999999999999995 799999984
Q ss_pred cC----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCC
Q 037566 75 RL----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPN 150 (360)
Q Consensus 75 ~~----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~ 150 (360)
.. .+.+.++++||.||+||++||+++ +|+||||+||.+|++.... +. +....+|+.|..+.+.
T Consensus 77 ~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-----~VkrlVytSS~~vv~~~~~-----~~---~~~~~dE~~~~~~~~~ 143 (280)
T PF01073_consen 77 VPPWGDYPPEEYYKVNVDGTRNVLEAARKA-----GVKRLVYTSSISVVFDNYK-----GD---PIINGDEDTPYPSSPL 143 (280)
T ss_pred ccccCcccHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcCcceeEeccC-----CC---CcccCCcCCccccccc
Confidence 22 256779999999999999999987 8999999999999985210 10 1223578877554556
Q ss_pred CcHHHHHHHHh----cC--------CCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 151 FYYAVEDIAAS----YS--------PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 151 ~~Y~~ek~l~e----~~--------~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
..|+.+|.++| +. ..+.+++|||+.||||++....+... ..+ + .|......|++. ...
T Consensus 144 ~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~-----~~~-~-~g~~~~~~g~~~---~~~ 213 (280)
T PF01073_consen 144 DPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLV-----KMV-R-SGLFLFQIGDGN---NLF 213 (280)
T ss_pred CchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhh-----HHH-H-hcccceeecCCC---ceE
Confidence 78999999998 21 23999999999999999865444321 111 2 343445567664 568
Q ss_pred cccCHHHHHHHHHHHHcC-------CCCCCCceeccCCCccc-HHHHHHHHHHHhCCCccC
Q 037566 219 DMSDSRVLAEQQIWAATT-------DRAKNQAFNCTNGDVFT-WKSLWKLLSEIFDVEFVP 271 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~-------~~~~g~~yni~~g~~~s-~~el~~~ia~~~g~~~~~ 271 (360)
|++|++|+|+|+++|+.. ....||+|+|+|+++++ ++|++..+.+.+|.+.+.
T Consensus 214 ~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 214 DFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred CcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 999999999999998641 23569999999999999 999999999999998775
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=277.59 Aligned_cols=282 Identities=16% Similarity=0.090 Sum_probs=208.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CC---------CCCCceeeEeeccCChHHHHHHHccCCCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WF---------PSSHVDHYITFDALDSTDTTQKLSSISQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~---------~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V 68 (360)
+||++|+++|++ +|++|++++|++... .. ...+++ ++.+|++|.+++.++++++. +|+|
T Consensus 17 fiG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~V 87 (340)
T PLN02653 17 QDGSYLTEFLLS------KGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMK-LHYGDLSDASSLRRWLDDIK--PDEV 87 (340)
T ss_pred ccHHHHHHHHHH------CCCEEEEEecccccccccchhhhccccccccCceE-EEEecCCCHHHHHHHHHHcC--CCEE
Confidence 699999999999 899999999875321 00 123588 99999999999999998864 7999
Q ss_pred EEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCc-----cEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 69 FWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRL-----RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 69 ~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v-----~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
||+|+... .++...+++|+.||.||+++|.+. ++ .+||++||+++||.. ..|
T Consensus 88 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-----~~~~~~~~~~v~~Ss~~vyg~~-------------~~~ 149 (340)
T PLN02653 88 YNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-----GQETGRQIKYYQAGSSEMYGST-------------PPP 149 (340)
T ss_pred EECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-----ccccccceeEEEeccHHHhCCC-------------CCC
Confidence 99998532 245567799999999999999986 44 489999999999852 237
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcCCCe-eeeC
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGLPF-RYLG 209 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~G 209 (360)
++|+.|.. |.+.|+.+|...| ...++.++..|++++|||+... .+......++ ..+ ..+.++ .+.|
T Consensus 150 ~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~g 224 (340)
T PLN02653 150 QSETTPFH--PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAV-GRI--KVGLQKKLFLG 224 (340)
T ss_pred CCCCCCCC--CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHH-HHH--HcCCCCceEeC
Confidence 88998865 4667999998887 2457888999999999997542 2221111111 111 134433 3457
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhH
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGE 289 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~ 289 (360)
++. +.+|++|++|+|++++.++..+ .+++|||++|+++|++|+++.+++.+|.+.... ..+..
T Consensus 225 ~g~---~~rd~i~v~D~a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~---~~~~~--------- 287 (340)
T PLN02653 225 NLD---ASRDWGFAGDYVEAMWLMLQQE--KPDDYVVATEESHTVEEFLEEAFGYVGLNWKDH---VEIDP--------- 287 (340)
T ss_pred CCc---ceecceeHHHHHHHHHHHHhcC--CCCcEEecCCCceeHHHHHHHHHHHcCCCCCcc---eeeCc---------
Confidence 776 6789999999999999888653 357899999999999999999999999642210 00000
Q ss_pred HHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 290 IWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
.+..+.. .....+|++|+++ |||+|+++++|||+++++|+++
T Consensus 288 --------~~~~~~~----------------~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~ 330 (340)
T PLN02653 288 --------RYFRPAE----------------VDNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLE 330 (340)
T ss_pred --------ccCCccc----------------cccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 0000000 0134679999986 7999999999999999999975
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=275.87 Aligned_cols=306 Identities=14% Similarity=0.111 Sum_probs=227.7
Q ss_pred CchHHHHHHHhcCCCCCCCC--cEEEEEecCCCC-CCC------CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGP--WKVYGTARRPPP-SWF------PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~-~~~------~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
|+|.||+++|++ .+ .+|+++|..+.. .+. ...+++ ++.+|++|...+..++++ + +|+|+
T Consensus 15 flG~hlv~~L~~------~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~-~~~~D~~~~~~i~~a~~~----~-~Vvh~ 82 (361)
T KOG1430|consen 15 FLGQHLVQALLE------NELKLEIRVVDKTPTQSNLPAELTGFRSGRVT-VILGDLLDANSISNAFQG----A-VVVHC 82 (361)
T ss_pred HHHHHHHHHHHh------cccccEEEEeccCccccccchhhhcccCCcee-EEecchhhhhhhhhhccC----c-eEEEe
Confidence 689999999998 55 889999988752 221 146789 999999999999999988 4 67788
Q ss_pred eeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 72 MFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 72 A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
|+... .+++.++++||.||+|++++|.+. +++++||+||..|..... +....+|+.|..
T Consensus 83 aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-----~v~~lIYtSs~~Vvf~g~-----------~~~n~~E~~p~p 146 (361)
T KOG1430|consen 83 AASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-----GVKRLIYTSSAYVVFGGE-----------PIINGDESLPYP 146 (361)
T ss_pred ccccCccccccchhhheeecchhHHHHHHHHHHh-----CCCEEEEecCceEEeCCe-----------ecccCCCCCCCc
Confidence 77422 257789999999999999999998 899999999999986421 224466777643
Q ss_pred CCCCCcHHHHHHHHh-----c--CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 147 PFPNFYYAVEDIAAS-----Y--SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-----~--~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
.....+|+.+|..+| + ..+|.++++||..|||||+......... .+ + .|..+...|+.+ ++.|
T Consensus 147 ~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~-----~~-~-~g~~~f~~g~~~---~~~~ 216 (361)
T KOG1430|consen 147 LKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVE-----AL-K-NGGFLFKIGDGE---NLND 216 (361)
T ss_pred cccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHH-----HH-H-ccCceEEeeccc---cccc
Confidence 223457999999888 2 2459999999999999998764443221 11 2 344444557665 6789
Q ss_pred ccCHHHHHHHHHHHHc-----CCCCCCCceeccCCCcccHHHHHHHHHHHhCCCcc-CCCcCCCCCHHHHHHHhhHHHHH
Q 037566 220 MSDSRVLAEQQIWAAT-----TDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFV-PFDEKEKFDAVEMMKEKGEIWDE 293 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~-----~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 293 (360)
++++.++|.|+++|.. .+...||+|+|+||.++...+++..|.+.+|...+ .+ ..|.++..+++...++...
T Consensus 217 ~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~--~~p~~l~~~~~~l~e~~~~ 294 (361)
T KOG1430|consen 217 FTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSI--KLPLFLSYFLAYLLEIVYF 294 (361)
T ss_pred eEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCcee--ecchHHHHHHHHHHHHHHH
Confidence 9999999999998753 34567999999999999988999999999998877 32 3677777777766554433
Q ss_pred HHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 294 IVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 294 ~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
+.+. ..+.+++. -++. + .....+|++||++ |||.|.++++|++.+++.|++..
T Consensus 295 ~l~p---~~p~lt~~----~v~~-~--~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~ 348 (361)
T KOG1430|consen 295 LLRP---YQPILTRF----RVAL-L--GVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASE 348 (361)
T ss_pred hccC---CCCCcChh----heee-e--ccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhh
Confidence 3321 12222221 1111 1 2367999999975 89999999999999999998653
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=285.84 Aligned_cols=274 Identities=15% Similarity=0.122 Sum_probs=200.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
|||+||+++|++ +|++|++++|..... ....++++ ++.+|+.+.. +.+ +|+|||+|+.
T Consensus 131 FIGs~Lv~~Ll~------~G~~V~~ldr~~~~~~~~~~~~~~~~~~~-~~~~Di~~~~-----~~~----~D~ViHlAa~ 194 (436)
T PLN02166 131 FVGSHLVDKLIG------RGDEVIVIDNFFTGRKENLVHLFGNPRFE-LIRHDVVEPI-----LLE----VDQIYHLACP 194 (436)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCCCccHhHhhhhccCCceE-EEECcccccc-----ccC----CCEEEECcee
Confidence 699999999999 899999999853211 01124688 9999998753 344 6899999985
Q ss_pred cC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC--CC
Q 037566 75 RL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR--LP 147 (360)
Q Consensus 75 ~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~--~p 147 (360)
.. .++.+++++|+.||.||+++|+++ ++ +|||+||+.|||.. ...|.+|+... .|
T Consensus 195 ~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-----g~-r~V~~SS~~VYg~~------------~~~p~~E~~~~~~~p 256 (436)
T PLN02166 195 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDP------------LEHPQKETYWGNVNP 256 (436)
T ss_pred ccchhhccCHHHHHHHHHHHHHHHHHHHHHh-----CC-EEEEECcHHHhCCC------------CCCCCCccccccCCC
Confidence 32 256788999999999999999987 54 89999999999853 23467777421 11
Q ss_pred -CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 148 -FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 148 -~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
.|.+.|+.+|..+| +..+++++++||++||||++....+.+....+.. + ..+.++.+.|++. ..+|
T Consensus 257 ~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~-~--l~~~~i~v~g~g~---~~rd 330 (436)
T PLN02166 257 IGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQ-T--IRKQPMTVYGDGK---QTRS 330 (436)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHH-H--hcCCCcEEeCCCC---eEEe
Confidence 24667999998887 2458999999999999998531111111111111 1 1356677778876 5679
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhC
Q 037566 220 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHG 299 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
++|++|+|++++.+++.+ .+++|||++++.+|++|+++.|++.+|.+.... +.
T Consensus 331 fi~V~Dva~ai~~~~~~~--~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~-------------------------~~ 383 (436)
T PLN02166 331 FQYVSDLVDGLVALMEGE--HVGPFNLGNPGEFTMLELAEVVKETIDSSATIE-------------------------FK 383 (436)
T ss_pred eEEHHHHHHHHHHHHhcC--CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCee-------------------------eC
Confidence 999999999999887543 356999999999999999999999998643210 00
Q ss_pred CCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 300 l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
+..-.. .....+|++|+++ +||+|++++++||+++++||++.
T Consensus 384 --p~~~~~-------------~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~ 426 (436)
T PLN02166 384 --PNTADD-------------PHKRKPDISKAKELLNWEPKISLREGLPLMVSDFRNR 426 (436)
T ss_pred --CCCCCC-------------ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 000000 1245779999987 69999999999999999999763
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=271.96 Aligned_cols=305 Identities=13% Similarity=0.089 Sum_probs=216.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec---C
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR---L 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~---~ 76 (360)
+||++|+++|++ +|++|++++|++.... ....+++ ++.+|++|.+++.+++++ +|+|||+|+.. .
T Consensus 11 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~l~~~~~~----~d~vi~~a~~~~~~~ 79 (328)
T TIGR03466 11 FVGSAVVRLLLE------QGEEVRVLVRPTSDRRNLEGLDVE-IVEGDLRDPASLRKAVAG----CRALFHVAADYRLWA 79 (328)
T ss_pred chhHHHHHHHHH------CCCEEEEEEecCccccccccCCce-EEEeeCCCHHHHHHHHhC----CCEEEEeceecccCC
Confidence 589999999999 8999999999765421 2234788 999999999999999987 57999999742 2
Q ss_pred CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC-CCCcHHH
Q 037566 77 KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF-PNFYYAV 155 (360)
Q Consensus 77 ~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~-p~~~Y~~ 155 (360)
.+++..+++|+.|+.++++++.+. ++++||++||+.+||... ...+.+|+.+..+. +...|+.
T Consensus 80 ~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~e~~~~~~~~~~~~Y~~ 143 (328)
T TIGR03466 80 PDPEEMYAANVEGTRNLLRAALEA-----GVERVVYTSSVATLGVRG-----------DGTPADETTPSSLDDMIGHYKR 143 (328)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEechhhcCcCC-----------CCCCcCccCCCCcccccChHHH
Confidence 356788999999999999999886 789999999999998421 23578898876542 2457998
Q ss_pred HHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHH
Q 037566 156 EDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAE 228 (360)
Q Consensus 156 ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~ 228 (360)
+|.+.| ...+++++++||+++|||++........ + +...+ . .+.+ .+.+. ..+++|++|+|+
T Consensus 144 sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~-~-~~~~~-~-~~~~-~~~~~------~~~~i~v~D~a~ 212 (328)
T TIGR03466 144 SKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGR-I-IVDFL-N-GKMP-AYVDT------GLNLVHVDDVAE 212 (328)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHH-H-HHHHH-c-CCCc-eeeCC------CcceEEHHHHHH
Confidence 888776 2358999999999999998643222111 1 11111 1 2222 22222 247899999999
Q ss_pred HHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccc
Q 037566 229 QQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEI 308 (360)
Q Consensus 229 a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 308 (360)
+++.++..+ ..|+.||++ |+.+|++|+++.+++.+|.+.+.. ..|.++...++.....+..+ .+..+ .+..
T Consensus 213 a~~~~~~~~-~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~- 283 (328)
T TIGR03466 213 GHLLALERG-RIGERYILG-GENLTLKQILDKLAEITGRPAPRV--KLPRWLLLPVAWGAEALARL---TGKEP-RVTV- 283 (328)
T ss_pred HHHHHHhCC-CCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCC--cCCHHHHHHHHHHHHHHHHh---cCCCC-CCCH-
Confidence 999888653 467889885 788999999999999999865432 13444433333333333332 12111 1100
Q ss_pred cccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCCCC
Q 037566 309 TCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 309 ~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g~i 359 (360)
..++. ...+..+|++|+++ |||+|. +++++|+++++||+++|.+
T Consensus 284 ---~~~~~---~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~~ 328 (328)
T TIGR03466 284 ---DGVRM---AKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANGYL 328 (328)
T ss_pred ---HHHHH---HhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhCCC
Confidence 00111 12356889999976 799995 9999999999999999875
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=278.83 Aligned_cols=283 Identities=11% Similarity=0.037 Sum_probs=205.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCC-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWF-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL--- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~--- 76 (360)
+||++|+++|++ +||+|++++|+...... ....++ ++.+|++|.+.+.+++++ +|+|||+|+...
T Consensus 32 fIG~~l~~~L~~------~G~~V~~v~r~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~D~Vih~Aa~~~~~~ 100 (370)
T PLN02695 32 FIASHIARRLKA------EGHYIIASDWKKNEHMSEDMFCHE-FHLVDLRVMENCLKVTKG----VDHVFNLAADMGGMG 100 (370)
T ss_pred HHHHHHHHHHHh------CCCEEEEEEeccccccccccccce-EEECCCCCHHHHHHHHhC----CCEEEEcccccCCcc
Confidence 689999999999 89999999986532111 112367 899999999988888876 589999997421
Q ss_pred ---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcH
Q 037566 77 ---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYY 153 (360)
Q Consensus 77 ---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y 153 (360)
.++......|+.||.||+++|++. ++++|||+||..+||.... . ....+++|+.+....|.+.|
T Consensus 101 ~~~~~~~~~~~~N~~~t~nll~aa~~~-----~vk~~V~~SS~~vYg~~~~-----~---~~~~~~~E~~~~p~~p~s~Y 167 (370)
T PLN02695 101 FIQSNHSVIMYNNTMISFNMLEAARIN-----GVKRFFYASSACIYPEFKQ-----L---ETNVSLKESDAWPAEPQDAY 167 (370)
T ss_pred ccccCchhhHHHHHHHHHHHHHHHHHh-----CCCEEEEeCchhhcCCccc-----c---CcCCCcCcccCCCCCCCCHH
Confidence 234456789999999999999886 7999999999999985310 0 01235777653212357789
Q ss_pred HHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcc--hhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHH
Q 037566 154 AVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLN--NSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSR 224 (360)
Q Consensus 154 ~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~ 224 (360)
+.+|..+| ...+++++++||++||||+..... .......+..++ + .+.++.++|++. ..+|++|++
T Consensus 168 g~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~~g~g~---~~r~~i~v~ 242 (370)
T PLN02695 168 GLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAL-T-STDEFEMWGDGK---QTRSFTFID 242 (370)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHH-c-CCCCeEEeCCCC---eEEeEEeHH
Confidence 99998887 346899999999999999753111 111111111122 1 245677778776 567999999
Q ss_pred HHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccC
Q 037566 225 VLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTK 304 (360)
Q Consensus 225 dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 304 (360)
|+++++++++..+ .+++|||++++.+|++|+++.+++.+|.+.+.. ..| .+.
T Consensus 243 D~a~ai~~~~~~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~--~~~------------------------~~~ 294 (370)
T PLN02695 243 ECVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIALSFENKKLPIK--HIP------------------------GPE 294 (370)
T ss_pred HHHHHHHHHHhcc--CCCceEecCCCceeHHHHHHHHHHHhCCCCCce--ecC------------------------CCC
Confidence 9999998876543 368999999999999999999999998643211 000 000
Q ss_pred cccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 305 MEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 305 ~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
.. ....+|++|+++ +||+|+++++++|+++++|+++
T Consensus 295 -~~--------------~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~ 331 (370)
T PLN02695 295 -GV--------------RGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKE 331 (370)
T ss_pred -Cc--------------cccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 00 023579999987 7999999999999999999976
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=281.88 Aligned_cols=274 Identities=16% Similarity=0.135 Sum_probs=200.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
|||+||+++|++ +|++|++++|..... .....+++ ++.+|+.++. +.+ +|+|||+|+.
T Consensus 130 fIGs~Lv~~Ll~------~G~~V~~ld~~~~~~~~~~~~~~~~~~~~-~i~~D~~~~~-----l~~----~D~ViHlAa~ 193 (442)
T PLN02206 130 FVGSHLVDRLMA------RGDSVIVVDNFFTGRKENVMHHFSNPNFE-LIRHDVVEPI-----LLE----VDQIYHLACP 193 (442)
T ss_pred HHHHHHHHHHHH------CcCEEEEEeCCCccchhhhhhhccCCceE-EEECCccChh-----hcC----CCEEEEeeee
Confidence 689999999999 899999998753211 11235788 9999998763 344 6899999985
Q ss_pred cC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC--CC
Q 037566 75 RL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR--LP 147 (360)
Q Consensus 75 ~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~--~p 147 (360)
.. .++.+++++|+.||.||+++|++. ++ +|||+||+.|||.. ...|.+|+... .|
T Consensus 194 ~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-----g~-r~V~~SS~~VYg~~------------~~~p~~E~~~~~~~P 255 (442)
T PLN02206 194 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDP------------LQHPQVETYWGNVNP 255 (442)
T ss_pred cchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-----CC-EEEEECChHHhCCC------------CCCCCCccccccCCC
Confidence 32 256788999999999999999986 55 89999999999853 13456776421 12
Q ss_pred -CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 148 -FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 148 -~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
.+.+.|+.+|..+| +..+++++++||++||||+............+... ..+.++.++|++. ..+|
T Consensus 256 ~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~---l~~~~i~i~g~G~---~~rd 329 (442)
T PLN02206 256 IGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQA---LRKEPLTVYGDGK---QTRS 329 (442)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHH---HcCCCcEEeCCCC---EEEe
Confidence 23567999998887 24689999999999999975311111111112221 1356677778876 5579
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhC
Q 037566 220 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHG 299 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
++|++|+|++++++++.+ .+++|||++++.+|++|+++.+++.+|.+.... +
T Consensus 330 fi~V~Dva~ai~~a~e~~--~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~-----~--------------------- 381 (442)
T PLN02206 330 FQFVSDLVEGLMRLMEGE--HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIE-----F--------------------- 381 (442)
T ss_pred EEeHHHHHHHHHHHHhcC--CCceEEEcCCCceeHHHHHHHHHHHhCCCCcee-----e---------------------
Confidence 999999999999887643 356999999999999999999999998533210 0
Q ss_pred CCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 300 l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.+..... .....+|++|+++ +||+|+++++|+|+++++||++.
T Consensus 382 -~p~~~~~-------------~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~ 425 (442)
T PLN02206 382 -RPNTEDD-------------PHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQR 425 (442)
T ss_pred -CCCCCCC-------------ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 0000000 1134689999987 79999999999999999999763
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=267.55 Aligned_cols=273 Identities=15% Similarity=0.130 Sum_probs=201.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
|||++|+++|++ .|++|+++.+ ...+|++|.+++.++++..+ +|+|||+|+...
T Consensus 8 fiG~~l~~~L~~------~g~~v~~~~~--------------~~~~Dl~~~~~l~~~~~~~~--~d~Vih~A~~~~~~~~ 65 (306)
T PLN02725 8 LVGSAIVRKLEA------LGFTNLVLRT--------------HKELDLTRQADVEAFFAKEK--PTYVILAAAKVGGIHA 65 (306)
T ss_pred cccHHHHHHHHh------CCCcEEEeec--------------cccCCCCCHHHHHHHHhccC--CCEEEEeeeeecccch
Confidence 699999999998 8998876532 24579999999999988765 799999998521
Q ss_pred --CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC--CCCC-C
Q 037566 77 --KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL--PFPN-F 151 (360)
Q Consensus 77 --~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~--p~p~-~ 151 (360)
.++.+++++|+.||.||+++|.+. +++||||+||+.|||.. ...|++|+++.. +.|. .
T Consensus 66 ~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~SS~~vyg~~------------~~~~~~E~~~~~~~~~p~~~ 128 (306)
T PLN02725 66 NMTYPADFIRENLQIQTNVIDAAYRH-----GVKKLLFLGSSCIYPKF------------APQPIPETALLTGPPEPTNE 128 (306)
T ss_pred hhhCcHHHHHHHhHHHHHHHHHHHHc-----CCCeEEEeCceeecCCC------------CCCCCCHHHhccCCCCCCcc
Confidence 245678899999999999999987 78999999999999852 245788987322 1233 3
Q ss_pred cHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC-cc-hhHHHHHHHHHH-HhhcCCCeee-eCCcccccccccc
Q 037566 152 YYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS-LN-NSLLTLAVYATI-CRHQGLPFRY-LGNKYTWEHFCDM 220 (360)
Q Consensus 152 ~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~-~~-~~~~~~~~~~~~-~~~~~~~~~~-~G~~~~~~~~~d~ 220 (360)
.|+.+|.++| +..+++++++||++||||++.. .. ....+..+...+ .+..+.++.+ .|++. ..+++
T Consensus 129 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~---~~~~~ 205 (306)
T PLN02725 129 WYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGS---PLREF 205 (306)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCC---eeecc
Confidence 5998888776 3468999999999999997531 11 111111111111 1123555554 67665 56799
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCC
Q 037566 221 SDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGL 300 (360)
Q Consensus 221 ~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (360)
+|++|+|+++++++... ..++.||++++..+|+.|+++.+++.+|.+.... ..
T Consensus 206 i~v~Dv~~~~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~-----~~--------------------- 258 (306)
T PLN02725 206 LHVDDLADAVVFLMRRY-SGAEHVNVGSGDEVTIKELAELVKEVVGFEGELV-----WD--------------------- 258 (306)
T ss_pred ccHHHHHHHHHHHHhcc-ccCcceEeCCCCcccHHHHHHHHHHHhCCCCcee-----ec---------------------
Confidence 99999999999888653 3457899999999999999999999998643210 00
Q ss_pred CccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHC
Q 037566 301 YKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 301 ~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
+..... .....+|++|++++||+|+++++|+|+++++|++++
T Consensus 259 -~~~~~~-------------~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~ 300 (306)
T PLN02725 259 -TSKPDG-------------TPRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLEN 300 (306)
T ss_pred -CCCCCc-------------ccccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 000000 013478999998899999999999999999999875
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=268.87 Aligned_cols=285 Identities=17% Similarity=0.208 Sum_probs=204.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------C--CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------F--PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ +|++|++++|++.... . ...+++ ++.+|++|++++.+++++ +|+|||+
T Consensus 16 ~IG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~----~d~vih~ 84 (325)
T PLN02989 16 YIASWIVKLLLF------RGYTINATVRDPKDRKKTDHLLALDGAKERLK-LFKADLLDEGSFELAIDG----CETVFHT 84 (325)
T ss_pred HHHHHHHHHHHH------CCCEEEEEEcCCcchhhHHHHHhccCCCCceE-EEeCCCCCchHHHHHHcC----CCEEEEe
Confidence 589999999999 8999999888754210 0 114688 999999999999999987 5899999
Q ss_pred eeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 72 MFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 72 A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
|+... .++...+++|+.||.|++++|.+. .++++||++||.++|+.+.. ..+ +..+++|+.+..
T Consensus 85 A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~----~~~~~iv~~SS~~~~~~~~~---~~~----~~~~~~E~~~~~ 153 (325)
T PLN02989 85 ASPVAITVKTDPQVELINPAVNGTINVLRTCTKV----SSVKRVILTSSMAAVLAPET---KLG----PNDVVDETFFTN 153 (325)
T ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHc----CCceEEEEecchhheecCCc---cCC----CCCccCcCCCCc
Confidence 98421 234567899999999999999875 25789999999888764210 000 234688998765
Q ss_pred CC----CCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 147 PF----PNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 147 p~----p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
|. +.+.|+.+|..+| +..+++++++||++||||++....+... ..+. .+. .+.++ + +.
T Consensus 154 p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~-~~i~-~~~--~~~~~-~-~~----- 222 (325)
T PLN02989 154 PSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSV-AVIV-ELM--KGKNP-F-NT----- 222 (325)
T ss_pred hhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchH-HHHH-HHH--cCCCC-C-CC-----
Confidence 42 2456999998887 2468999999999999998643222211 1111 111 23322 1 22
Q ss_pred ccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHH
Q 037566 216 HFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIV 295 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (360)
..+|++|++|+|+++++++..+.. +++||+ +|..+|++|+++.|++.++......
T Consensus 223 ~~r~~i~v~Dva~a~~~~l~~~~~-~~~~ni-~~~~~s~~ei~~~i~~~~~~~~~~~----------------------- 277 (325)
T PLN02989 223 THHRFVDVRDVALAHVKALETPSA-NGRYII-DGPVVTIKDIENVLREFFPDLCIAD----------------------- 277 (325)
T ss_pred cCcCeeEHHHHHHHHHHHhcCccc-CceEEE-ecCCCCHHHHHHHHHHHCCCCCCCC-----------------------
Confidence 336899999999999998876543 568999 5668999999999999986321100
Q ss_pred HHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCC
Q 037566 296 EKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~i 359 (360)
.+...... + ...+..|++|+++|||+|.++++|||+++++||++.|.+
T Consensus 278 -----~~~~~~~~------~-----~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~~~~~ 325 (325)
T PLN02989 278 -----RNEDITEL------N-----SVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEKCLV 325 (325)
T ss_pred -----CCCCcccc------c-----ccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 00000000 0 114578999999999999999999999999999998763
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=254.88 Aligned_cols=273 Identities=15% Similarity=0.153 Sum_probs=207.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCC------CCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPP------SWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~------~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
|||||||++|.. +||+|+++|.--.. .+...+.++ .+.-|+..+ .+.+ ||+|||+|+.
T Consensus 38 FIgSHLvdkLm~------egh~VIa~Dn~ftg~k~n~~~~~~~~~fe-l~~hdv~~p-----l~~e----vD~IyhLAap 101 (350)
T KOG1429|consen 38 FIGSHLVDKLMT------EGHEVIALDNYFTGRKENLEHWIGHPNFE-LIRHDVVEP-----LLKE----VDQIYHLAAP 101 (350)
T ss_pred hHHHHHHHHHHh------cCCeEEEEecccccchhhcchhccCccee-EEEeechhH-----HHHH----hhhhhhhccC
Confidence 799999999998 89999999964221 133567888 888888876 6666 5899999985
Q ss_pred cCC-----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC--C
Q 037566 75 RLK-----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL--P 147 (360)
Q Consensus 75 ~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~--p 147 (360)
..+ ++-..+..|+.||.|+|-.|.+. + +||+++||+.|||.+- ..|..|+.-.. |
T Consensus 102 asp~~y~~npvktIktN~igtln~lglakrv-----~-aR~l~aSTseVYgdp~------------~hpq~e~ywg~vnp 163 (350)
T KOG1429|consen 102 ASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-----G-ARFLLASTSEVYGDPL------------VHPQVETYWGNVNP 163 (350)
T ss_pred CCCcccccCccceeeecchhhHHHHHHHHHh-----C-ceEEEeecccccCCcc------------cCCCccccccccCc
Confidence 332 56778899999999999999987 4 8999999999999752 34455554322 2
Q ss_pred -CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 148 -FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 148 -~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
.|.+.|...|.++| +..|+.+.|.|++|.|||+....-..+.+.++.++ ..+.|+.+.|+|. +.++
T Consensus 164 igpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~---lr~epltv~g~G~---qtRS 237 (350)
T KOG1429|consen 164 IGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQA---LRGEPLTVYGDGK---QTRS 237 (350)
T ss_pred CCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHH---hcCCCeEEEcCCc---ceEE
Confidence 45677999999888 56799999999999999986422223333333232 2578999999998 7789
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhC
Q 037566 220 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHG 299 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
|+++.|++++++.+++.+.. +-|||++++.+|+.|+++.+.+..|-..... . +
T Consensus 238 F~yvsD~Vegll~Lm~s~~~--~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~----------~--------------~- 290 (350)
T KOG1429|consen 238 FQYVSDLVEGLLRLMESDYR--GPVNIGNPGEFTMLELAEMVKELIGPVSEIE----------F--------------V- 290 (350)
T ss_pred EEeHHHHHHHHHHHhcCCCc--CCcccCCccceeHHHHHHHHHHHcCCCccee----------e--------------c-
Confidence 99999999999988765433 4499999999999999999999885332210 0 0
Q ss_pred CCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 300 l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
.+.+ ++ ...+--|++||++ |||.|.++++|||+.|+.|+|+
T Consensus 291 -~~~~-Dd-------------p~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~ 332 (350)
T KOG1429|consen 291 -ENGP-DD-------------PRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRE 332 (350)
T ss_pred -CCCC-CC-------------ccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHH
Confidence 0000 00 1245779999987 7999999999999999999986
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=271.40 Aligned_cols=285 Identities=13% Similarity=0.063 Sum_probs=208.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------C--CCCCCceeeEeeccCChHHHHHHHccCCCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------W--FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~ 69 (360)
+||++|+++|++ +|++|++++|..... . ....+++ ++.+|++|++++.+++++.+ +|+||
T Consensus 16 ~iG~~l~~~L~~------~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~l~~~~~~~~--~d~vi 86 (352)
T PLN02240 16 YIGSHTVLQLLL------AGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLV-FHKVDLRDKEALEKVFASTR--FDAVI 86 (352)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCCcchHHHHHHHHHhhcccCccce-EEecCcCCHHHHHHHHHhCC--CCEEE
Confidence 589999999999 899999998753211 0 0124688 99999999999999888654 79999
Q ss_pred EeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 70 WVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 70 h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
|+|+... .++...+++|+.++.|++++|.+. ++++||++||+.+||.. ...+++|+.|
T Consensus 87 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~vyg~~------------~~~~~~E~~~ 149 (352)
T PLN02240 87 HFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-----GCKKLVFSSSATVYGQP------------EEVPCTEEFP 149 (352)
T ss_pred EccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEccHHHhCCC------------CCCCCCCCCC
Confidence 9998422 255678899999999999999876 68999999999999852 2457899988
Q ss_pred CCCCCCCcHHHHHHHHh-------c-CCCCcEEEEcCCCeeecCCCC--------cchhHHHHHHHHHHHhhcCCCeeee
Q 037566 145 RLPFPNFYYAVEDIAAS-------Y-SPAVTYSVHRSSIIIGASSRS--------LNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e-------~-~~~~~~~ilRp~~vyGp~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
..| .+.|+.+|...| . ..+++++++|+++|||+++.. ....+.+ .+..+......++.+.
T Consensus 150 ~~~--~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 225 (352)
T PLN02240 150 LSA--TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMP--YVQQVAVGRRPELTVF 225 (352)
T ss_pred CCC--CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHH--HHHHHHhCCCCceEEe
Confidence 654 567998888777 1 247899999999999985321 1111111 1122221112234444
Q ss_pred C------CcccccccccccCHHHHHHHHHHHHcC----CCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCC
Q 037566 209 G------NKYTWEHFCDMSDSRVLAEQQIWAATT----DRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKF 278 (360)
Q Consensus 209 G------~~~~~~~~~d~~~v~dla~a~~~a~~~----~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~ 278 (360)
| ++. +.+|++|++|+|++++.++.. +...|++|||++++++|++|+++.+++.+|.+.+.. ..+
T Consensus 226 g~~~~~~~g~---~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~--~~~- 299 (352)
T PLN02240 226 GNDYPTKDGT---GVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLK--LAP- 299 (352)
T ss_pred CCCCCCCCCC---EEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCce--eCC-
Confidence 4 333 678999999999999887753 223468999999999999999999999998654311 000
Q ss_pred CHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCC
Q 037566 279 DAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMK 357 (360)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g 357 (360)
..+ . + .....+|++|+++ |||+|+++++|+|+++++||++++
T Consensus 300 -----------------------~~~-~--------~-----~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~ 342 (352)
T PLN02240 300 -----------------------RRP-G--------D-----AEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNP 342 (352)
T ss_pred -----------------------CCC-C--------C-----hhhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence 000 0 0 0134679999986 799999999999999999999986
Q ss_pred C
Q 037566 358 I 358 (360)
Q Consensus 358 ~ 358 (360)
+
T Consensus 343 ~ 343 (352)
T PLN02240 343 Y 343 (352)
T ss_pred c
Confidence 4
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=271.92 Aligned_cols=283 Identities=15% Similarity=0.135 Sum_probs=199.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C----CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F----PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~----~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
|||++|+++|++ +|++|++++|++.... . ...+++ ++.+|++|.+.+.+++++ +|+|||+
T Consensus 16 fIGs~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~v~~Dl~d~~~~~~~~~~----~d~ViH~ 84 (351)
T PLN02650 16 FIGSWLVMRLLE------RGYTVRATVRDPANVKKVKHLLDLPGATTRLT-LWKADLAVEGSFDDAIRG----CTGVFHV 84 (351)
T ss_pred HHHHHHHHHHHH------CCCEEEEEEcCcchhHHHHHHHhccCCCCceE-EEEecCCChhhHHHHHhC----CCEEEEe
Confidence 689999999999 8999999998753310 0 013578 999999999999999987 5899999
Q ss_pred eeecC---CCh-hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC-CCCCCCC-
Q 037566 72 MFQRL---KSE-EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP-FKEDSLR- 145 (360)
Q Consensus 72 A~~~~---~~~-~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p-~~E~~p~- 145 (360)
|+... .++ ...+++|+.||.||+++|.+. ..++||||+||.++|+... ...| ++|+...
T Consensus 85 A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~~~~r~v~~SS~~~~~~~~-----------~~~~~~~E~~~~~ 149 (351)
T PLN02650 85 ATPMDFESKDPENEVIKPTVNGMLSIMKACAKA----KTVRRIVFTSSAGTVNVEE-----------HQKPVYDEDCWSD 149 (351)
T ss_pred CCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhc----CCceEEEEecchhhcccCC-----------CCCCccCcccCCc
Confidence 98432 133 468899999999999999886 1378999999998876421 1223 4666421
Q ss_pred ------CCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 146 ------LPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 146 ------~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
.+.|.+.|+.+|..+| ..++++++++||++||||+......... +. .+....+.... .+..
T Consensus 150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~-~~---~~~~~~~~~~~-~~~~- 223 (351)
T PLN02650 150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSL-IT---ALSLITGNEAH-YSII- 223 (351)
T ss_pred hhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccH-HH---HHHHhcCCccc-cCcC-
Confidence 1123457999998887 3468999999999999998643221111 11 11111122211 2222
Q ss_pred cccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHH
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWD 292 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
..+|++|++|+|+++++++..+.. ++.| ++++..+|++|+++.|++.++.... |..+ .
T Consensus 224 ---~~r~~v~V~Dva~a~~~~l~~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~~~~~------~~~~----~------- 281 (351)
T PLN02650 224 ---KQGQFVHLDDLCNAHIFLFEHPAA-EGRY-ICSSHDATIHDLAKMLREKYPEYNI------PARF----P------- 281 (351)
T ss_pred ---CCcceeeHHHHHHHHHHHhcCcCc-CceE-EecCCCcCHHHHHHHHHHhCcccCC------CCCC----C-------
Confidence 236999999999999998876433 4579 5677889999999999998762111 1110 0
Q ss_pred HHHHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCCC
Q 037566 293 EIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360 (360)
Q Consensus 293 ~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~ip 360 (360)
+ .+.. .....+|++|++++||+|+++++|||+++++||++.+++|
T Consensus 282 ------~-~~~~----------------~~~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~~~~~~ 326 (351)
T PLN02650 282 ------G-IDED----------------LKSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIP 326 (351)
T ss_pred ------C-cCcc----------------cccccCChHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 0 0000 0134679999988999999999999999999999999875
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=268.92 Aligned_cols=278 Identities=13% Similarity=0.141 Sum_probs=190.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChH---HH-HHHHcc--CCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDST---DT-TQKLSS--ISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~---~l-~~~l~~--~~~~v~~V~h~A~~ 74 (360)
|||+||+++|++ .|++|+++.|+..... .... +..+|+.|.. ++ .+++++ .. ++|+|||+|+.
T Consensus 10 fiG~~l~~~L~~------~g~~~v~~~~~~~~~~---~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~ 78 (308)
T PRK11150 10 FIGSNIVKALND------KGITDILVVDNLKDGT---KFVN-LVDLDIADYMDKEDFLAQIMAGDDFG-DIEAIFHEGAC 78 (308)
T ss_pred HHHHHHHHHHHh------CCCceEEEecCCCcch---HHHh-hhhhhhhhhhhHHHHHHHHhcccccC-CccEEEECcee
Confidence 689999999999 8998777766543210 1123 4556666643 32 333322 11 27999999984
Q ss_pred cC---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCC
Q 037566 75 RL---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNF 151 (360)
Q Consensus 75 ~~---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~ 151 (360)
.. .++..++++|+.+|.||+++|++. ++ +|||+||+.+||.. ...+.+|+++.. |.+
T Consensus 79 ~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-----~~-~~i~~SS~~vyg~~------------~~~~~~E~~~~~--p~~ 138 (308)
T PRK11150 79 SSTTEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGR------------TDDFIEEREYEK--PLN 138 (308)
T ss_pred cCCcCCChHHHHHHHHHHHHHHHHHHHHc-----CC-cEEEEcchHHhCcC------------CCCCCccCCCCC--CCC
Confidence 22 244567899999999999999986 56 69999999999853 123577887654 466
Q ss_pred cHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc--chhHHHHHHHHHHHhhcCCC-eeeeCCccccccccccc
Q 037566 152 YYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL--NNSLLTLAVYATICRHQGLP-FRYLGNKYTWEHFCDMS 221 (360)
Q Consensus 152 ~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~~~~~~d~~ 221 (360)
.|+.+|..+| ...+++++++||++||||++... +...... +...+. .+.+ ..+.|++. ..+|++
T Consensus 139 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~-~~~~~~--~~~~~~i~~g~~~---~~r~~i 212 (308)
T PRK11150 139 VYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFH-LNNQLN--NGENPKLFEGSEN---FKRDFV 212 (308)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHH-HHHHHh--cCCCCEEecCCCc---eeeeee
Confidence 7999998877 24589999999999999986421 1111110 111121 2433 33445554 568999
Q ss_pred CHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCC
Q 037566 222 DSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLY 301 (360)
Q Consensus 222 ~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (360)
|++|+|+++++++.++ .+++|||++|+++|++|+++.+++.+|...... .+.+
T Consensus 213 ~v~D~a~a~~~~~~~~--~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~---~~~~---------------------- 265 (308)
T PRK11150 213 YVGDVAAVNLWFWENG--VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEY---IPFP---------------------- 265 (308)
T ss_pred eHHHHHHHHHHHHhcC--CCCeEEcCCCCceeHHHHHHHHHHHhCCCccee---ccCc----------------------
Confidence 9999999999887643 357999999999999999999999998531110 0100
Q ss_pred ccCcccccccchhhhhhccccccccchhHHHHcCCCcc-cccHHHHHHHHHHHH
Q 037566 302 KTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGF-ADTMKSIRTWVKKLR 354 (360)
Q Consensus 302 ~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~-~~~~~~l~~~~~~~~ 354 (360)
..... . . ......|++|++++||+|+ .+++|||+++++|+.
T Consensus 266 -~~~~~--~-------~--~~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 266 -DKLKG--R-------Y--QAFTQADLTKLRAAGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred -ccccc--c-------c--ceecccCHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence 00000 0 0 0134679999999999987 599999999999984
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=269.40 Aligned_cols=289 Identities=15% Similarity=0.097 Sum_probs=201.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CC-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WF-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
|||++|+++|++ +|++|++++|++... .+ ..++++ ++.+|++|++++.+++++ +|+|||+|
T Consensus 20 fIG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~vih~A 88 (338)
T PLN00198 20 FLASLLIKLLLQ------KGYAVNTTVRDPENQKKIAHLRALQELGDLK-IFGADLTDEESFEAPIAG----CDLVFHVA 88 (338)
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCCCCHHHHHHHHhcCCCCceE-EEEcCCCChHHHHHHHhc----CCEEEEeC
Confidence 589999999999 899999998875331 01 113588 999999999999999887 58999999
Q ss_pred eecC---CChh-HhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC---
Q 037566 73 FQRL---KSEE-INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR--- 145 (360)
Q Consensus 73 ~~~~---~~~~-~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~--- 145 (360)
+... .++. .++++|+.||.||+++|.+. .+++||||+||+++||.... .+ ...+++|+...
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~----~~~~~~v~~SS~~~~g~~~~----~~----~~~~~~E~~~~~~~ 156 (338)
T PLN00198 89 TPVNFASEDPENDMIKPAIQGVHNVLKACAKA----KSVKRVILTSSAAAVSINKL----SG----TGLVMNEKNWTDVE 156 (338)
T ss_pred CCCccCCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeecceeeeccCC----CC----CCceeccccCCchh
Confidence 8422 2333 46799999999999999875 25899999999999984210 00 12345565310
Q ss_pred ----CCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC-Cccc
Q 037566 146 ----LPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG-NKYT 213 (360)
Q Consensus 146 ----~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~~~ 213 (360)
.+.|.+.|+.+|..+| +..+++++++||++||||++....+.... +...+ ..+.++.+.| ++.+
T Consensus 157 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~--~~~~~--~~~~~~~~~g~~~~~ 232 (338)
T PLN00198 157 FLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS--LAMSL--ITGNEFLINGLKGMQ 232 (338)
T ss_pred hhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH--HHHHH--HcCCccccccccccc
Confidence 0125667999998887 34689999999999999986422211111 11111 1344444444 2221
Q ss_pred c-cccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHH
Q 037566 214 W-EHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWD 292 (360)
Q Consensus 214 ~-~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
. ...+|++|++|+|+++++++..+. .++.| ++++..+|++|+++.+.+.++.... +...
T Consensus 233 ~~~~~~~~i~V~D~a~a~~~~~~~~~-~~~~~-~~~~~~~s~~el~~~i~~~~~~~~~------~~~~------------ 292 (338)
T PLN00198 233 MLSGSISITHVEDVCRAHIFLAEKES-ASGRY-ICCAANTSVPELAKFLIKRYPQYQV------PTDF------------ 292 (338)
T ss_pred cccCCcceeEHHHHHHHHHHHhhCcC-cCCcE-EEecCCCCHHHHHHHHHHHCCCCCC------Cccc------------
Confidence 1 123699999999999998887543 34568 5667889999999999988753111 1110
Q ss_pred HHHHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCC
Q 037566 293 EIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 293 ~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~i 359 (360)
+ ..+. .....+|.+|++++||+|+++++|||+++++||+++||+
T Consensus 293 ------~-~~~~----------------~~~~~~~~~k~~~~G~~p~~~l~~gi~~~~~~~~~~~~~ 336 (338)
T PLN00198 293 ------G-DFPS----------------KAKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKGLL 336 (338)
T ss_pred ------c-ccCC----------------CCccccChHHHHhCCceecCcHHHHHHHHHHHHHHcCCC
Confidence 0 0000 013467999998899999999999999999999999986
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=270.56 Aligned_cols=284 Identities=14% Similarity=0.042 Sum_probs=205.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
+||++|+++|++ +|++|++++|++.... . ...+++ ++.+|++|++++.+++++.+ +|+|||+|+.
T Consensus 15 ~IG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~--~d~vih~A~~ 85 (349)
T TIGR02622 15 FKGSWLSLWLLE------LGAEVYGYSLDPPTSPNLFELLNLAKKIE-DHFGDIRDAAKLRKAIAEFK--PEIVFHLAAQ 85 (349)
T ss_pred hhHHHHHHHHHH------CCCEEEEEeCCCccchhHHHHHhhcCCce-EEEccCCCHHHHHHHHhhcC--CCEEEECCcc
Confidence 699999999999 8999999998764321 0 123577 89999999999999999875 7999999984
Q ss_pred cC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 75 RL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 75 ~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
.. .++...+++|+.|+.+++++|.+. + .+++||++||+++||... ...+.+|+.+.. |
T Consensus 86 ~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~-~~~~iv~~SS~~vyg~~~-----------~~~~~~e~~~~~--p 148 (349)
T TIGR02622 86 PLVRKSYADPLETFETNVMGTVNLLEAIRAI---G-SVKAVVNVTSDKCYRNDE-----------WVWGYRETDPLG--G 148 (349)
T ss_pred cccccchhCHHHHHHHhHHHHHHHHHHHHhc---C-CCCEEEEEechhhhCCCC-----------CCCCCccCCCCC--C
Confidence 21 256678899999999999999875 2 378999999999998531 124678887754 4
Q ss_pred CCcHHHHHHHHh-------cC-------CCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 150 NFYYAVEDIAAS-------YS-------PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 150 ~~~Y~~ek~l~e-------~~-------~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
.+.|+.+|...| .. ++++++++||++||||++... ..+.+..+.. + ..|.++.+ +++.
T Consensus 149 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~~~~~~~~~-~--~~g~~~~~-~~g~--- 220 (349)
T TIGR02622 149 HDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE-DRLIPDVIRA-F--SSNKIVII-RNPD--- 220 (349)
T ss_pred CCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh-hhhhHHHHHH-H--hcCCCeEE-CCCC---
Confidence 566888887666 11 389999999999999975321 1111111111 1 23556554 4554
Q ss_pred ccccccCHHHHHHHHHHHHcCC----CCCCCceeccCC--CcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhH
Q 037566 216 HFCDMSDSRVLAEQQIWAATTD----RAKNQAFNCTNG--DVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGE 289 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~----~~~g~~yni~~g--~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~ 289 (360)
..+|++|++|+|++++.++... ...+++|||++| +++|+.|+++.+++.++.....+ ...
T Consensus 221 ~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~----~~~---------- 286 (349)
T TIGR02622 221 ATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEW----EDD---------- 286 (349)
T ss_pred cccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCce----eec----------
Confidence 6689999999999998876531 123689999975 69999999999999876422111 000
Q ss_pred HHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 290 IWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
+.+.... + .....+|++|+++ +||+|++++++||+++++|+++
T Consensus 287 ------------~~~~~~~------~-----~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~ 330 (349)
T TIGR02622 287 ------------SDLNHPH------E-----ARLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKA 330 (349)
T ss_pred ------------cCCCCCc------c-----cceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 0000000 0 1135789999987 7999999999999999999976
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=293.04 Aligned_cols=286 Identities=12% Similarity=0.054 Sum_probs=210.9
Q ss_pred CchHHHHHHHhcCCCCCCC--CcEEEEEecCCC-CC----C--CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGG--PWKVYGTARRPP-PS----W--FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~--g~~V~~l~r~~~-~~----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
|||++|+++|++ + +++|++++|... .. . ...++++ ++.+|++|.+.+.+++...+ +|+|||+
T Consensus 17 fIG~~lv~~Ll~------~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~d~~~~~~~~~~~~--~D~ViHl 87 (668)
T PLN02260 17 FIASHVANRLIR------NYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK-FVKGDIASADLVNYLLITEG--IDTIMHF 87 (668)
T ss_pred HHHHHHHHHHHH------hCCCCEEEEEeCCCccchhhhhhhcccCCCeE-EEECCCCChHHHHHHHhhcC--CCEEEEC
Confidence 699999999998 5 689999998531 10 0 1135789 99999999988877764332 7999999
Q ss_pred eeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 72 MFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 72 A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
|+... .++.+++++|+.||.+|+++|++. + .++||||+||..+||.... ....+.+|+++..
T Consensus 88 Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~-~vkr~I~~SS~~vyg~~~~---------~~~~~~~E~~~~~ 154 (668)
T PLN02260 88 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT---G-QIRRFIHVSTDEVYGETDE---------DADVGNHEASQLL 154 (668)
T ss_pred CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc---C-CCcEEEEEcchHHhCCCcc---------ccccCccccCCCC
Confidence 98532 245678899999999999999886 2 3899999999999996310 0112346777654
Q ss_pred CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 147 PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
|.+.|+.+|..+| +..+++++|+||++||||++.. ..+.+..+..+ ..+.++++.|++. +.++
T Consensus 155 --p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~--~~~i~~~~~~a---~~g~~i~i~g~g~---~~r~ 224 (668)
T PLN02260 155 --PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLA---MQGKPLPIHGDGS---NVRS 224 (668)
T ss_pred --CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCc--ccHHHHHHHHH---hCCCCeEEecCCC---ceEe
Confidence 4566999888877 3468999999999999998632 11122112111 2456777778876 5679
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhC
Q 037566 220 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHG 299 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
++|++|+|+++++++.. ...|++|||++++.+|++|+++.+++.+|.+.... +..
T Consensus 225 ~ihV~Dva~a~~~~l~~-~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~-----i~~------------------- 279 (668)
T PLN02260 225 YLYCEDVAEAFEVVLHK-GEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKS-----IKF------------------- 279 (668)
T ss_pred eEEHHHHHHHHHHHHhc-CCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcce-----eee-------------------
Confidence 99999999999888754 34579999999999999999999999999753210 000
Q ss_pred CCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCC
Q 037566 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMK 357 (360)
Q Consensus 300 l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g 357 (360)
....++. ......|++|++++||+|.++++|+|+++++||++++
T Consensus 280 ~~~~p~~--------------~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~~ 323 (668)
T PLN02260 280 VENRPFN--------------DQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNP 323 (668)
T ss_pred cCCCCCC--------------cceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhCh
Confidence 0001111 1134689999999999999999999999999998764
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=265.23 Aligned_cols=281 Identities=16% Similarity=0.156 Sum_probs=201.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------C--CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------F--PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ +|++|++++|+..... . ..++++ ++.+|++|++++.+++++ +|+|||+
T Consensus 15 fIG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~----~d~Vih~ 83 (322)
T PLN02662 15 YIASWLVKLLLQ------RGYTVKATVRDPNDPKKTEHLLALDGAKERLH-LFKANLLEEGSFDSVVDG----CEGVFHT 83 (322)
T ss_pred HHHHHHHHHHHH------CCCEEEEEEcCCCchhhHHHHHhccCCCCceE-EEeccccCcchHHHHHcC----CCEEEEe
Confidence 589999999999 8999999998754210 0 124688 999999999999999987 5899999
Q ss_pred eeecC---CChh-HhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc--ccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 72 MFQRL---KSEE-INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH--YMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 72 A~~~~---~~~~-~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v--Yg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
|+... .++. .++++|+.||.|++++|.+. .+++||||+||+++ ||.... ....+++|+.+.
T Consensus 84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~v~~SS~~~~~y~~~~~---------~~~~~~~E~~~~ 150 (322)
T PLN02662 84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV----PSVKRVVVTSSMAAVAYNGKPL---------TPDVVVDETWFS 150 (322)
T ss_pred CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC----CCCCEEEEccCHHHhcCCCcCC---------CCCCcCCcccCC
Confidence 98422 2443 68899999999999999874 26899999999764 653100 023468888765
Q ss_pred CCC----CCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 146 LPF----PNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 146 ~p~----p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
.|. +.+.|+.+|.++| +..+++++++||++||||+......... ..+...+ .+.+. + ++
T Consensus 151 ~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~-~~~~~~~---~~~~~-~-~~---- 220 (322)
T PLN02662 151 DPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSA-EAILNLI---NGAQT-F-PN---- 220 (322)
T ss_pred ChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchH-HHHHHHh---cCCcc-C-CC----
Confidence 441 1246999998887 2468999999999999997532212111 1111111 23321 2 22
Q ss_pred cccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHH
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEI 294 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (360)
..+|++|++|+|++++.++..+.. ++.||++ |..+|++|+++.+.+.++.... |...
T Consensus 221 -~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~-g~~~s~~e~~~~i~~~~~~~~~------~~~~-------------- 277 (322)
T PLN02662 221 -ASYRWVDVRDVANAHIQAFEIPSA-SGRYCLV-ERVVHYSEVVKILHELYPTLQL------PEKC-------------- 277 (322)
T ss_pred -CCcCeEEHHHHHHHHHHHhcCcCc-CCcEEEe-CCCCCHHHHHHHHHHHCCCCCC------CCCC--------------
Confidence 347999999999999998876544 4578996 6789999999999998763111 1110
Q ss_pred HHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCC
Q 037566 295 VEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 295 ~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~i 359 (360)
.+.. .. .....+|++|+++|||+| ++++||++++++||+++||+
T Consensus 278 ------~~~~-~~-------------~~~~~~d~~k~~~lg~~~-~~~~~~l~~~~~~~~~~~~~ 321 (322)
T PLN02662 278 ------ADDK-PY-------------VPTYQVSKEKAKSLGIEF-IPLEVSLKDTVESLKEKGFL 321 (322)
T ss_pred ------CCcc-cc-------------ccccccChHHHHHhCCcc-ccHHHHHHHHHHHHHHcCCC
Confidence 0000 00 013478999999899996 79999999999999999986
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=266.50 Aligned_cols=286 Identities=10% Similarity=0.009 Sum_probs=205.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+||++|+++|++ +|++|++++|...... ....+++ ++.+|++|++++.++++..+ +|+|+|+|
T Consensus 11 ~iG~~l~~~L~~------~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~vvh~a 81 (338)
T PRK10675 11 YIGSHTCVQLLQ------NGHDVVILDNLCNSKRSVLPVIERLGGKHPT-FVEGDIRNEALLTEILHDHA--IDTVIHFA 81 (338)
T ss_pred hHHHHHHHHHHH------CCCeEEEEecCCCchHhHHHHHHHhcCCCce-EEEccCCCHHHHHHHHhcCC--CCEEEECC
Confidence 589999999999 8999999986532210 1124577 89999999999999887643 79999999
Q ss_pred eecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 73 FQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 73 ~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
+... ..+.+++++|+.++.+|+++|++. ++++||++||+.+||.. ...+++|+.|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~yg~~------------~~~~~~E~~~~~- 143 (338)
T PRK10675 82 GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNLIFSSSATVYGDQ------------PKIPYVESFPTG- 143 (338)
T ss_pred ccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHhhCCC------------CCCccccccCCC-
Confidence 7532 135678899999999999999886 78999999999999852 245788998752
Q ss_pred CCCCcHHHHHHHHh-------c-CCCCcEEEEcCCCeeecCCCCcch------hHHHHHHHHHHHhhcCCCeeeeC----
Q 037566 148 FPNFYYAVEDIAAS-------Y-SPAVTYSVHRSSIIIGASSRSLNN------SLLTLAVYATICRHQGLPFRYLG---- 209 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e-------~-~~~~~~~ilRp~~vyGp~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~G---- 209 (360)
.|.+.|+.+|...| + ..+++++++|++++|||.+...+. ....+.....+......++.+.|
T Consensus 144 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
T PRK10675 144 TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP 223 (338)
T ss_pred CCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCC
Confidence 35677998888776 1 247999999999999985321110 00001111112111122333333
Q ss_pred --CcccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHH
Q 037566 210 --NKYTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMK 285 (360)
Q Consensus 210 --~~~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~ 285 (360)
++. +.+|++|++|+|++++.++.. ....+++|||++++.+|++|+++.+++.+|.+.+.. ..|.
T Consensus 224 ~~~g~---~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~------- 291 (338)
T PRK10675 224 TEDGT---GVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYH--FAPR------- 291 (338)
T ss_pred CCCCc---EEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCee--eCCC-------
Confidence 333 568999999999999988864 223468999999999999999999999999754311 0000
Q ss_pred HhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 286 EKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 286 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.+. + ....++|++|+++ +||+|.++++++|+++++|++++
T Consensus 292 ---------------~~~-----------~-----~~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~ 332 (338)
T PRK10675 292 ---------------REG-----------D-----LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_pred ---------------CCC-----------c-----hhhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence 000 0 0134689999986 69999999999999999999874
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=268.57 Aligned_cols=302 Identities=11% Similarity=0.059 Sum_probs=209.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcE-EEEEecCCCC-C-----CC-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWK-VYGTARRPPP-S-----WF-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~-V~~l~r~~~~-~-----~~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+||++|+++|++ +|++ |++++|.... . .. ...+++ ++.+|++|.+++.+++++.+ +|.|||+|
T Consensus 11 ~iG~~l~~~L~~------~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~vih~A 81 (352)
T PRK10084 11 FIGSAVVRHIIN------NTQDSVVNVDKLTYAGNLESLADVSDSERYV-FEHADICDRAELDRIFAQHQ--PDAVMHLA 81 (352)
T ss_pred HHhHHHHHHHHH------hCCCeEEEecCCCccchHHHHHhcccCCceE-EEEecCCCHHHHHHHHHhcC--CCEEEECC
Confidence 689999999998 7865 6666654211 0 00 124578 89999999999999998754 79999999
Q ss_pred eecC-----CChhHhhhhhHHHHHHHHHHHHhhcc----CCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRL-----KSEEINISNNSTMFKNVMSVVVDSNK----GRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~----~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+... .++++++++|+.||.|++++|++.++ ...++++||++||..+||....+....+. ....+++|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~--~~~~~~~E~~ 159 (352)
T PRK10084 82 AESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS--EELPLFTETT 159 (352)
T ss_pred cccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc--ccCCCccccC
Confidence 8532 24677899999999999999986311 01246799999999999852100000000 0012478888
Q ss_pred CCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 144 LRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
+.. |.+.|+.+|..+| +..+++++++||++||||++.. ... .+..+.. + ..+.++++.|++. .
T Consensus 160 ~~~--p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~-~~~-~~~~~~~-~--~~~~~~~~~~~g~---~ 229 (352)
T PRK10084 160 AYA--PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP-EKL-IPLVILN-A--LEGKPLPIYGKGD---Q 229 (352)
T ss_pred CCC--CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc-cch-HHHHHHH-H--hcCCCeEEeCCCC---e
Confidence 765 4667999998877 3468999999999999998532 111 1111111 1 1355667777776 5
Q ss_pred cccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHH
Q 037566 217 FCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVE 296 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (360)
.+|++|++|+|+++++++.. ...+++|||++++++|++|+++.+++.+|...+.. .+.. . .+
T Consensus 230 ~~~~v~v~D~a~a~~~~l~~-~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~---~~~~--~----------~~-- 291 (352)
T PRK10084 230 IRDWLYVEDHARALYKVVTE-GKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKA---TSYR--E----------QI-- 291 (352)
T ss_pred EEeeEEHHHHHHHHHHHHhc-CCCCceEEeCCCCcCcHHHHHHHHHHHhccccccc---cchh--h----------hc--
Confidence 68999999999999888764 34589999999999999999999999999643211 1110 0 00
Q ss_pred HhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 297 KHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 297 ~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
...+.... + ...+.+|++|+++ +||+|+++++|+|+++++||+++
T Consensus 292 --~~~~~~~~--------~-----~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~ 337 (352)
T PRK10084 292 --TYVADRPG--------H-----DRRYAIDASKISRELGWKPQETFESGIRKTVEWYLAN 337 (352)
T ss_pred --cccccCCC--------C-----CceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence 00000000 0 1145789999986 79999999999999999999874
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=263.82 Aligned_cols=283 Identities=17% Similarity=0.181 Sum_probs=200.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC----CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF----PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~----~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||+||+++|++ +|++|+++.|+.... .. ...+++ ++.+|++|++++.+++++ +|+|||+
T Consensus 16 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~----~d~vih~ 84 (322)
T PLN02986 16 YIASWIVKLLLL------RGYTVKATVRDLTDRKKTEHLLALDGAKERLK-LFKADLLEESSFEQAIEG----CDAVFHT 84 (322)
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCCcchHHHHHHHhccCCCCceE-EEecCCCCcchHHHHHhC----CCEEEEe
Confidence 589999999999 899999999875431 00 124689 999999999999999987 5899999
Q ss_pred eeecC---CCh-hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 72 MFQRL---KSE-EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 72 A~~~~---~~~-~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
|+... .++ .+++++|+.||.|++++|++. ++++||||+||+++|+... ... ....+++|+++..|
T Consensus 85 A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~~~~~~------~~~-~~~~~~~E~~~~~p 153 (322)
T PLN02986 85 ASPVFFTVKDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAAVLFRQ------PPI-EANDVVDETFFSDP 153 (322)
T ss_pred CCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhheecCC------ccC-CCCCCcCcccCCCh
Confidence 98432 233 356899999999999999874 2689999999987653210 000 01345788875433
Q ss_pred ----CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 148 ----FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 148 ----~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
.|.+.|+.+|.++| +.++++++++||++||||+.....+.... .+...+ .+.++ .|+ .
T Consensus 154 ~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~-~~~~~~---~g~~~--~~~-----~ 222 (322)
T PLN02986 154 SLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVE-LIVDFI---NGKNL--FNN-----R 222 (322)
T ss_pred HHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHH-HHHHHH---cCCCC--CCC-----c
Confidence 23567999998887 34689999999999999975422221111 111111 23332 232 4
Q ss_pred cccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHH
Q 037566 217 FCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVE 296 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (360)
.++++|++|+|+++++++..+.. +++||+ +|+.+|++|+++.|++.++- ...+ .. .
T Consensus 223 ~~~~v~v~Dva~a~~~al~~~~~-~~~yni-~~~~~s~~e~~~~i~~~~~~-~~~~-----~~-----~----------- 278 (322)
T PLN02986 223 FYRFVDVRDVALAHIKALETPSA-NGRYII-DGPIMSVNDIIDILRELFPD-LCIA-----DT-----N----------- 278 (322)
T ss_pred CcceeEHHHHHHHHHHHhcCccc-CCcEEE-ecCCCCHHHHHHHHHHHCCC-CCCC-----CC-----C-----------
Confidence 46899999999999999876644 458999 56789999999999999862 1111 00 0
Q ss_pred HhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCC
Q 037566 297 KHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 297 ~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~i 359 (360)
...... .....+|++|+++|||+|+ +++|+++++++||++.|+|
T Consensus 279 ----~~~~~~--------------~~~~~~d~~~~~~lg~~~~-~l~e~~~~~~~~~~~~~~~ 322 (322)
T PLN02986 279 ----EESEMN--------------EMICKVCVEKVKNLGVEFT-PMKSSLRDTILSLKEKCLL 322 (322)
T ss_pred ----cccccc--------------ccCCccCHHHHHHcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence 000000 0012579999999999986 9999999999999999975
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=248.90 Aligned_cols=290 Identities=14% Similarity=0.109 Sum_probs=216.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCC----CCC---CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRP----PPS---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~----~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
||||+.++.+.. .|+ .+..+.++.-. ... ....++.+ ++++|+.|...+...+..-. +|+|+|.|+
T Consensus 17 fi~Sn~~~~~~~-~~p---~~~~v~idkL~~~s~~~~l~~~~n~p~yk-fv~~di~~~~~~~~~~~~~~--id~vihfaa 89 (331)
T KOG0747|consen 17 FIGSNFINYLVD-KYP---DYKFVNLDKLDYCSNLKNLEPVRNSPNYK-FVEGDIADADLVLYLFETEE--IDTVIHFAA 89 (331)
T ss_pred cchhhhhhhccc-CCC---CCcEEEEeecccccccchhhhhccCCCce-EeeccccchHHHHhhhccCc--hhhhhhhHh
Confidence 799999999996 233 34555555311 110 11347889 99999999988877765443 899999998
Q ss_pred ecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 74 QRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 74 ~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
... .++-++...|+.+|.+||++++.. +++++|||+||.+|||... + ....+|.++++
T Consensus 90 ~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~s----g~i~~fvhvSTdeVYGds~------~-----~~~~~E~s~~n-- 152 (331)
T KOG0747|consen 90 QTHVDRSFGDSFEFTKNNILSTHVLLEAVRVS----GNIRRFVHVSTDEVYGDSD------E-----DAVVGEASLLN-- 152 (331)
T ss_pred hhhhhhhcCchHHHhcCCchhhhhHHHHHHhc----cCeeEEEEecccceecCcc------c-----cccccccccCC--
Confidence 532 367788899999999999999986 4899999999999999753 1 22234888765
Q ss_pred CCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccccc
Q 037566 149 PNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMS 221 (360)
Q Consensus 149 p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~ 221 (360)
|.+.|+.+|+++| ++.+++++++|-.|||||++.. -.+.+-++ .++ ..+.+.++.|++. +.++++
T Consensus 153 PtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~--~klipkFi--~l~-~~~~~~~i~g~g~---~~rs~l 224 (331)
T KOG0747|consen 153 PTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYP--EKLIPKFI--KLA-MRGKEYPIHGDGL---QTRSYL 224 (331)
T ss_pred CCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcCh--HHHhHHHH--HHH-HhCCCcceecCcc---cceeeE
Confidence 4777999999998 5789999999999999998642 12222222 222 2467788889987 788999
Q ss_pred CHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCC
Q 037566 222 DSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLY 301 (360)
Q Consensus 222 ~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (360)
|++|+++++-.+++. +..||+|||++..+++..|+++.|.+.++...+... ..|+.. ++ .
T Consensus 225 ~veD~~ea~~~v~~K-g~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~-~~p~~~--~v----------------~ 284 (331)
T KOG0747|consen 225 YVEDVSEAFKAVLEK-GELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNID-TEPFIF--FV----------------E 284 (331)
T ss_pred eHHHHHHHHHHHHhc-CCccceeeccCcchhhHHHHHHHHHHHHHHhccCCC-CCCcce--ec----------------C
Confidence 999999998877664 667999999999999999999999999987554321 011111 00 1
Q ss_pred ccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHC
Q 037566 302 KTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 302 ~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
..+.. ..+...|.+|+|.|||+|.++.++||+.+++||.++
T Consensus 285 dRp~n--------------d~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~~~ 325 (331)
T KOG0747|consen 285 DRPYN--------------DLRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYTKN 325 (331)
T ss_pred CCCcc--------------cccccccHHHHHhcCCcccCcHHHHHHHHHHHHHhh
Confidence 11111 124678999999999999999999999999999874
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=260.85 Aligned_cols=270 Identities=11% Similarity=0.071 Sum_probs=192.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
|||+||+++|++ +| +|++++|.. + .+.+|++|++++.+++++.+ +|+|||+|+....
T Consensus 11 fiGs~l~~~L~~------~g-~V~~~~~~~----------~-~~~~Dl~d~~~~~~~~~~~~--~D~Vih~Aa~~~~~~~ 70 (299)
T PRK09987 11 QVGWELQRALAP------LG-NLIALDVHS----------T-DYCGDFSNPEGVAETVRKIR--PDVIVNAAAHTAVDKA 70 (299)
T ss_pred HHHHHHHHHhhc------cC-CEEEecccc----------c-cccCCCCCHHHHHHHHHhcC--CCEEEECCccCCcchh
Confidence 699999999998 78 799998753 2 46789999999999999765 7999999985432
Q ss_pred --ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 78 --SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 78 --~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
+++..+++|+.||.||+++|++. ++ +|||+||..|||.. ...|++|+++.. |.+.|+.
T Consensus 71 ~~~~~~~~~~N~~~~~~l~~aa~~~-----g~-~~v~~Ss~~Vy~~~------------~~~p~~E~~~~~--P~~~Yg~ 130 (299)
T PRK09987 71 ESEPEFAQLLNATSVEAIAKAANEV-----GA-WVVHYSTDYVFPGT------------GDIPWQETDATA--PLNVYGE 130 (299)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEccceEECCC------------CCCCcCCCCCCC--CCCHHHH
Confidence 45667899999999999999987 54 79999999999853 245789998854 5778999
Q ss_pred HHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC--cccccccccccCHHHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN--KYTWEHFCDMSDSRVLAEQQ 230 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~~~~~~d~~~v~dla~a~ 230 (360)
+|+.+| .....+++|+||++||||+..+.... +...+ ..+.++.+.|+ +. ...+...++|+++++
T Consensus 131 sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~~~~-----~~~~~--~~~~~~~v~~d~~g~---~~~~~~~~d~~~~~~ 200 (299)
T PRK09987 131 TKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKT-----MLRLA--KEREELSVINDQFGA---PTGAELLADCTAHAI 200 (299)
T ss_pred HHHHHHHHHHHhCCCEEEEecceecCCCCCCHHHH-----HHHHH--hcCCCeEEeCCCcCC---CCCHHHHHHHHHHHH
Confidence 999998 33456789999999999975432111 11112 13556777776 32 122233466778777
Q ss_pred HHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCC---CccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCccc
Q 037566 231 IWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDV---EFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEE 307 (360)
Q Consensus 231 ~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 307 (360)
..++..+ ..+++||+++++.+|+.|+++.|.+.++. +.. +..-.+.+... ++ .+..+
T Consensus 201 ~~~~~~~-~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~-~~~i~~~~~~~---------------~~---~~~~r 260 (299)
T PRK09987 201 RVALNKP-EVAGLYHLVASGTTTWHDYAALVFEEARKAGITLA-LNKLNAVPTSA---------------YP---TPARR 260 (299)
T ss_pred HHhhccC-CCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcC-cCeeeecchhh---------------cC---CCCCC
Confidence 7665433 23469999999999999999999887543 221 00001111100 00 00001
Q ss_pred ccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHH
Q 037566 308 ITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLR 354 (360)
Q Consensus 308 ~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~ 354 (360)
+.+...|++|+++ +||+|. +++|+|+++++.|.
T Consensus 261 -------------p~~~~ld~~k~~~~lg~~~~-~~~~~l~~~~~~~~ 294 (299)
T PRK09987 261 -------------PHNSRLNTEKFQQNFALVLP-DWQVGVKRMLTELF 294 (299)
T ss_pred -------------CCcccCCHHHHHHHhCCCCc-cHHHHHHHHHHHHh
Confidence 2256889999987 799975 99999999998764
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=264.91 Aligned_cols=292 Identities=14% Similarity=0.130 Sum_probs=199.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
|||++|+++|++ +|++|++++|++... .....+++ ++.+|++|.+++.+++++ +|+|||+|+.
T Consensus 21 fIG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~----~d~Vih~A~~ 89 (353)
T PLN02896 21 YIGSWLVKLLLQ------RGYTVHATLRDPAKSLHLLSKWKEGDRLR-LFRADLQEEGSFDEAVKG----CDGVFHVAAS 89 (353)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCChHHHHHHHHhhccCCeEE-EEECCCCCHHHHHHHHcC----CCEEEECCcc
Confidence 689999999999 899999999875321 11124688 999999999999999886 5899999985
Q ss_pred cCC-------ChhHh-----hhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 75 RLK-------SEEIN-----ISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 75 ~~~-------~~~~~-----~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
... +++.+ +++|+.||.||+++|++. .++++||++||+++||.... .|. ...+++|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~----~~~~~~v~~SS~~vyg~~~~----~~~---~~~~~~E~ 158 (353)
T PLN02896 90 MEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS----KTVKRVVFTSSISTLTAKDS----NGR---WRAVVDET 158 (353)
T ss_pred ccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc----CCccEEEEEechhhcccccc----CCC---CCCccCcc
Confidence 321 33333 344569999999999875 24899999999999985310 010 12457776
Q ss_pred CC--CC-----CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCC--ee
Q 037566 143 SL--RL-----PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLP--FR 206 (360)
Q Consensus 143 ~p--~~-----p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 206 (360)
.+ .. +.|.+.|+.+|+++| +..+++++++||++||||+....++... ...+....|.+ ..
T Consensus 159 ~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~----~~~~~~~~g~~~~~~ 234 (353)
T PLN02896 159 CQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSI----QVLLSPITGDSKLFS 234 (353)
T ss_pred cCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchH----HHHHHHhcCCccccc
Confidence 32 11 123457999999888 3468999999999999998643222211 11111112222 11
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHH
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKE 286 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~ 286 (360)
..+........+|++|++|+|++++.++..+. .+++||+ ++.++|++|+++.+++.++...... ..
T Consensus 235 ~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~-~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~------~~------ 300 (353)
T PLN02896 235 ILSAVNSRMGSIALVHIEDICDAHIFLMEQTK-AEGRYIC-CVDSYDMSELINHLSKEYPCSNIQV------RL------ 300 (353)
T ss_pred cccccccccCceeEEeHHHHHHHHHHHHhCCC-cCccEEe-cCCCCCHHHHHHHHHHhCCCCCccc------cc------
Confidence 11211111123599999999999999887543 3457864 6788999999999999986321100 00
Q ss_pred hhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCCC
Q 037566 287 KGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360 (360)
Q Consensus 287 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~ip 360 (360)
.++... | .....|++|++++||+|+++++++|+++++||++++.+|
T Consensus 301 --------------~~~~~~--------~------~~~~~~~~~~~~lGw~p~~~l~~~i~~~~~~~~~~~~~~ 346 (353)
T PLN02896 301 --------------DEEKRG--------S------IPSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDHGFLP 346 (353)
T ss_pred --------------cccccC--------c------cccccCHHHHHHcCCCccCCHHHHHHHHHHHHHHCCCCC
Confidence 000000 0 122458999988999999999999999999999998765
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=258.31 Aligned_cols=284 Identities=15% Similarity=0.111 Sum_probs=210.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
|||++|+++|++ +||+|++++|..........+++ ++.+|++|.+.+.++++++ .|.|||+|+....
T Consensus 11 fiG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~---~d~vih~aa~~~~~~~ 80 (314)
T COG0451 11 FIGSHLVERLLA------AGHDVRGLDRLRDGLDPLLSGVE-FVVLDLTDRDLVDELAKGV---PDAVIHLAAQSSVPDS 80 (314)
T ss_pred cHHHHHHHHHHh------CCCeEEEEeCCCccccccccccc-eeeecccchHHHHHHHhcC---CCEEEEccccCchhhh
Confidence 699999999999 89999999997654321125688 9999999998888888875 2799999985332
Q ss_pred ---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC-CCCCCCCCCcH
Q 037566 78 ---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED-SLRLPFPNFYY 153 (360)
Q Consensus 78 ---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~-~p~~p~p~~~Y 153 (360)
++.+++++|+.||.|++++|++. +++||||+||.++|+... ...+++|+ .+.. |.+.|
T Consensus 81 ~~~~~~~~~~~nv~gt~~ll~aa~~~-----~~~~~v~~ss~~~~~~~~-----------~~~~~~E~~~~~~--p~~~Y 142 (314)
T COG0451 81 NASDPAEFLDVNVDGTLNLLEAARAA-----GVKRFVFASSVSVVYGDP-----------PPLPIDEDLGPPR--PLNPY 142 (314)
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeCCCceECCCC-----------CCCCcccccCCCC--CCCHH
Confidence 23468999999999999999986 799999988878787431 23478898 4544 44479
Q ss_pred HHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcch-hHHHHHHHHHHHhhcCCC-eeeeCCcccccccccccCHH
Q 037566 154 AVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNN-SLLTLAVYATICRHQGLP-FRYLGNKYTWEHFCDMSDSR 224 (360)
Q Consensus 154 ~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~G~~~~~~~~~d~~~v~ 224 (360)
+.+|+.+| ...+++++++||++||||++...++ ......+. .+ ..+.+ ..+.+++. ..++++|++
T Consensus 143 g~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~---~~~~~i~v~ 216 (314)
T COG0451 143 GVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIR-QL--LKGEPIIVIGGDGS---QTRDFVYVD 216 (314)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHH-HH--HhCCCcceEeCCCc---eeEeeEeHH
Confidence 99999888 2357999999999999998753222 11111111 11 23444 45555654 457899999
Q ss_pred HHHHHHHHHHcCCCCCCCceeccCCC-cccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCcc
Q 037566 225 VLAEQQIWAATTDRAKNQAFNCTNGD-VFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKT 303 (360)
Q Consensus 225 dla~a~~~a~~~~~~~g~~yni~~g~-~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 303 (360)
|++++++++++++... +|||+++. .+|++|+.+.+++.+|.+.+... ..+. ...
T Consensus 217 D~a~~~~~~~~~~~~~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~-~~~~----------------------~~~ 271 (314)
T COG0451 217 DVADALLLALENPDGG--VFNIGSGTAEITVRELAEAVAEAVGSKAPLIV-YIPL----------------------GRR 271 (314)
T ss_pred HHHHHHHHHHhCCCCc--EEEeCCCCCcEEHHHHHHHHHHHhCCCCccee-ecCC----------------------CCC
Confidence 9999999998765433 99999997 99999999999999998654210 0000 000
Q ss_pred CcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCC
Q 037566 304 KMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMK 357 (360)
Q Consensus 304 ~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g 357 (360)
.. ......+|++|+++ +||+|..++++++.++++|+....
T Consensus 272 ~~--------------~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 272 GD--------------LREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred Cc--------------ccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 00 02256889999975 899999999999999999998754
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=254.64 Aligned_cols=284 Identities=11% Similarity=0.048 Sum_probs=208.7
Q ss_pred CchHHHHHHHhcCCCCCCCC--cEEEEEecCCCC---C----CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGP--WKVYGTARRPPP---S----WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~---~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ .| ++|++++|.... . ....++++ ++.+|++|++++.+++++.. +|.|||+
T Consensus 10 ~iG~~l~~~l~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~--~d~vi~~ 80 (317)
T TIGR01181 10 FIGSNFVRYILN------EHPDAEVIVLDKLTYAGNLENLADLEDNPRYR-FVKGDIGDRELVSRLFTEHQ--PDAVVHF 80 (317)
T ss_pred hHHHHHHHHHHH------hCCCCEEEEecCCCcchhhhhhhhhccCCCcE-EEEcCCcCHHHHHHHHhhcC--CCEEEEc
Confidence 589999999998 66 789999864211 0 11124688 99999999999999999864 6999999
Q ss_pred eeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 72 MFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 72 A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
|+... .+++.++++|+.|+.+++++|.+. ..+ .++|++||..+||... ...+.+|+.+..
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~i~~Ss~~v~g~~~-----------~~~~~~e~~~~~ 145 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY---WHE-FRFHHISTDEVYGDLE-----------KGDAFTETTPLA 145 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc---CCC-ceEEEeeccceeCCCC-----------CCCCcCCCCCCC
Confidence 98532 245678899999999999999875 212 2799999999998531 123678888754
Q ss_pred CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 147 PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
|...|+.+|...| ...+++++++||+.+|||+.... .. .+. +...+ ..+.++++.|++. ..++
T Consensus 146 --~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~-~~~-~~~~~--~~~~~~~~~~~g~---~~~~ 215 (317)
T TIGR01181 146 --PSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KL-IPL-MITNA--LAGKPLPVYGDGQ---QVRD 215 (317)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cH-HHH-HHHHH--hcCCCceEeCCCc---eEEe
Confidence 4667998888777 24689999999999999975321 11 111 11111 1355666677776 5579
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhC
Q 037566 220 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHG 299 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
++|++|+|+++..++.+ ...|++||+++++++|++|+++.+++.+|.+.... . +.
T Consensus 216 ~i~v~D~a~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~----~-----~~--------------- 270 (317)
T TIGR01181 216 WLYVEDHCRAIYLVLEK-GRVGETYNIGGGNERTNLEVVETILELLGKDEDLI----T-----HV--------------- 270 (317)
T ss_pred eEEHHHHHHHHHHHHcC-CCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccc----c-----cc---------------
Confidence 99999999999988764 34579999999999999999999999998643211 0 00
Q ss_pred CCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCCC
Q 037566 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMKI 358 (360)
Q Consensus 300 l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g~ 358 (360)
...... .....+|++|+++ +||+|+++++++++++++||+++++
T Consensus 271 --~~~~~~-------------~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~ 315 (317)
T TIGR01181 271 --EDRPGH-------------DRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNEW 315 (317)
T ss_pred --CCCccc-------------hhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhccC
Confidence 000000 1134689999976 7999999999999999999998765
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=248.36 Aligned_cols=287 Identities=16% Similarity=0.109 Sum_probs=215.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h 70 (360)
+||||.+-+|++ +|+.|.++|+-.... ..+..++. ++++||+|.++|++.++... +|+|+|
T Consensus 13 yiGsht~l~L~~------~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~-f~~~Dl~D~~~L~kvF~~~~--fd~V~H 83 (343)
T KOG1371|consen 13 YIGSHTVLALLK------RGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVF-FVEGDLNDAEALEKLFSEVK--FDAVMH 83 (343)
T ss_pred ceehHHHHHHHh------CCCcEEEEecccccchhHHHHHHHhcCCCCceE-EEEeccCCHHHHHHHHhhcC--CceEEe
Confidence 699999999999 999999999632110 12347899 99999999999999999886 899999
Q ss_pred eeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 71 VMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 71 ~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
+|+... .+|..++..|+.||.|||++|+++ +++.+||+||++|||.+ ...|++|++|.
T Consensus 84 fa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-----~~~~~V~sssatvYG~p------------~~ip~te~~~t 146 (343)
T KOG1371|consen 84 FAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-----NVKALVFSSSATVYGLP------------TKVPITEEDPT 146 (343)
T ss_pred ehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-----CCceEEEecceeeecCc------------ceeeccCcCCC
Confidence 998533 367789999999999999999997 69999999999999975 46899999997
Q ss_pred CCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeee--cCCC--C----cchhHHHHHHH-HHHHhhcCCCeeeeC
Q 037566 146 LPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIG--ASSR--S----LNNSLLTLAVY-ATICRHQGLPFRYLG 209 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyG--p~~~--~----~~~~~~~~~~~-~~~~~~~~~~~~~~G 209 (360)
. .|.+.|+.+|...| ...+|.++.||.++++| |.-+ + ..+...+ .++ .++.| ...+...|
T Consensus 147 ~-~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr--~~~l~v~g 222 (343)
T KOG1371|consen 147 D-QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGR--RPNLQVVG 222 (343)
T ss_pred C-CCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcc--cccceeec
Confidence 6 46778999888777 34569999999999999 4211 1 1111111 111 11111 11122222
Q ss_pred Ccccc---cccccccCHHHHHHHHHHHHcCCCC--CCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHH
Q 037566 210 NKYTW---EHFCDMSDSRVLAEQQIWAATTDRA--KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMM 284 (360)
Q Consensus 210 ~~~~~---~~~~d~~~v~dla~a~~~a~~~~~~--~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~ 284 (360)
+.-.+ ..++|.+|+-|+|++++.|+..... .-++||+++|...|+.||+.++++.+|.+.+.. + +
T Consensus 223 ~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~-------~---v 292 (343)
T KOG1371|consen 223 RDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKK-------V---V 292 (343)
T ss_pred CcccccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCcc-------c---c
Confidence 21110 2688999999999999998875543 235999999999999999999999999887642 0 0
Q ss_pred HHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHH-HcCCCcccccHHHHHHHHHHHHHCC
Q 037566 285 KEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSR-EFGFFGFADTMKSIRTWVKKLREMK 357 (360)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar-~lG~~p~~~~~~~l~~~~~~~~~~g 357 (360)
+..++ |. -..++++++|+ ||||+|.++++|++++.++|+.+.-
T Consensus 293 --------------~~R~g-----------dv-----~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~np 336 (343)
T KOG1371|consen 293 --------------PRRNG-----------DV-----AFVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQNP 336 (343)
T ss_pred --------------CCCCC-----------Cc-----eeeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcCC
Confidence 00011 11 14588999994 6999999999999999999998753
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-32 Score=253.47 Aligned_cols=285 Identities=12% Similarity=0.078 Sum_probs=196.6
Q ss_pred CchHHHHHHHhcCCCCCCCCc-EEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHcc-CCCCccEEEEeeeec---
Q 037566 1 MAGLSLAEALKNNPTIPGGPW-KVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS-ISQEVTHLFWVMFQR--- 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~-~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~-~~~~v~~V~h~A~~~--- 75 (360)
+||++|+++|++ +|+ +|++++|......+...... .+.+|+.+.+.++.+.+. .. ++|+|+|+|+..
T Consensus 9 ~iG~~l~~~L~~------~g~~~v~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~-~~D~vvh~A~~~~~~ 80 (314)
T TIGR02197 9 FIGSNLVKALNE------RGITDILVVDNLRDGHKFLNLADL-VIADYIDKEDFLDRLEKGAFG-KIEAIFHQGACSDTT 80 (314)
T ss_pred hhhHHHHHHHHH------cCCceEEEEecCCCchhhhhhhhe-eeeccCcchhHHHHHHhhccC-CCCEEEECccccCcc
Confidence 689999999998 897 79888876433211111224 677899888777766541 11 279999999853
Q ss_pred CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 76 LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 76 ~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
..++...+++|+.||.||+++|.+. ++ +|||+||+.+||.. ..+.+|+++.. .|.+.|+.
T Consensus 81 ~~~~~~~~~~n~~~~~~ll~~~~~~-----~~-~~v~~SS~~vy~~~-------------~~~~~e~~~~~-~p~~~Y~~ 140 (314)
T TIGR02197 81 ETDGEYMMENNYQYSKRLLDWCAEK-----GI-PFIYASSAATYGDG-------------EAGFREGRELE-RPLNVYGY 140 (314)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHh-----CC-cEEEEccHHhcCCC-------------CCCcccccCcC-CCCCHHHH
Confidence 2356678899999999999999886 55 79999999999852 23456666432 35667998
Q ss_pred HHHHHh---c------CCCCcEEEEcCCCeeecCCCCc--chhHHHHHHHHHHHhhcCCCeeeeCCcccc---ccccccc
Q 037566 156 EDIAAS---Y------SPAVTYSVHRSSIIIGASSRSL--NNSLLTLAVYATICRHQGLPFRYLGNKYTW---EHFCDMS 221 (360)
Q Consensus 156 ek~l~e---~------~~~~~~~ilRp~~vyGp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~---~~~~d~~ 221 (360)
+|...| . ..+++++++||++||||++... +..+.. .++..+ ..+.++...|+...| ...++++
T Consensus 141 sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~i 217 (314)
T TIGR02197 141 SKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAF-HLFNQI--KAGGNVKLFKSSEGFKDGEQLRDFV 217 (314)
T ss_pred HHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHH-HHHHHH--hcCCCeEEecCccccCCCCceeeeE
Confidence 887776 1 2367999999999999986321 111110 111111 134444443322111 2567999
Q ss_pred CHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCC
Q 037566 222 DSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLY 301 (360)
Q Consensus 222 ~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (360)
|++|++++++.++.. ..+++||+++++++|++|+++.+++.+|.+.... ..|.+-
T Consensus 218 ~v~D~a~~i~~~~~~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~--------------------- 272 (314)
T TIGR02197 218 YVKDVVDVNLWLLEN--GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIE--YIPMPE--------------------- 272 (314)
T ss_pred EHHHHHHHHHHHHhc--ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcce--eccCcc---------------------
Confidence 999999999988865 4568999999999999999999999999754210 011110
Q ss_pred ccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHH
Q 037566 302 KTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLR 354 (360)
Q Consensus 302 ~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~ 354 (360)
..... ......+|++|+++ +||+|+++++|+++++++|++
T Consensus 273 -~~~~~------------~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 273 -ALRGK------------YQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL 313 (314)
T ss_pred -ccccc------------cccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence 00000 01134679999987 699999999999999999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=262.48 Aligned_cols=277 Identities=16% Similarity=0.157 Sum_probs=197.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC------------CCCCCceeeEeeccCChHHHHHHHccCCCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW------------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~------------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V 68 (360)
+||++|+++|++ +||+|++++|++.... +...+++ ++.+|+.| +.+++.... +|+|
T Consensus 67 ~iG~~lv~~L~~------~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d---~~~~~~~~~--~d~V 134 (378)
T PLN00016 67 FIGFYLAKELVK------AGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVK-TVWGDPAD---VKSKVAGAG--FDVV 134 (378)
T ss_pred eEhHHHHHHHHH------CCCEEEEEecCCcchhhhccCchhhhhHhhhcCce-EEEecHHH---HHhhhccCC--ccEE
Confidence 689999999999 8999999999864310 0123589 99999987 444554332 6899
Q ss_pred EEeeeecCCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 69 FWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 69 ~h~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+|+++. +..++++|++||++. +++||||+||..+||.. ...|.+|+++..|.
T Consensus 135 i~~~~~-----------~~~~~~~ll~aa~~~-----gvkr~V~~SS~~vyg~~------------~~~p~~E~~~~~p~ 186 (378)
T PLN00016 135 YDNNGK-----------DLDEVEPVADWAKSP-----GLKQFLFCSSAGVYKKS------------DEPPHVEGDAVKPK 186 (378)
T ss_pred EeCCCC-----------CHHHHHHHHHHHHHc-----CCCEEEEEccHhhcCCC------------CCCCCCCCCcCCCc
Confidence 998642 356789999999986 89999999999999852 23467787765542
Q ss_pred CCCcHHHHHHHHhcCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHH
Q 037566 149 PNFYYAVEDIAASYSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAE 228 (360)
Q Consensus 149 p~~~Y~~ek~l~e~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~ 228 (360)
.+....|.++. ..+++++++||+++|||+..+.. . .. ++..+ ..+.+++++|++. ...+++|++|+|+
T Consensus 187 -~sK~~~E~~l~--~~~l~~~ilRp~~vyG~~~~~~~--~-~~-~~~~~--~~~~~i~~~g~g~---~~~~~i~v~Dva~ 254 (378)
T PLN00016 187 -AGHLEVEAYLQ--KLGVNWTSFRPQYIYGPGNNKDC--E-EW-FFDRL--VRGRPVPIPGSGI---QLTQLGHVKDLAS 254 (378)
T ss_pred -chHHHHHHHHH--HcCCCeEEEeceeEECCCCCCch--H-HH-HHHHH--HcCCceeecCCCC---eeeceecHHHHHH
Confidence 12333344443 46899999999999999764321 1 11 11112 1356677778765 5678999999999
Q ss_pred HHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccc
Q 037566 229 QQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEI 308 (360)
Q Consensus 229 a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 308 (360)
+++.++.++...|++|||++++.+|++|+++.+++.+|.+.... +++...+ .+..+. ..++.
T Consensus 255 ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~----~~~~~~~---------~~~~~~---~~p~~-- 316 (378)
T PLN00016 255 MFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIV----HYDPKAV---------GFGAKK---AFPFR-- 316 (378)
T ss_pred HHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCcee----ecCcccc---------Cccccc---ccccc--
Confidence 99999877666689999999999999999999999999765311 1111000 000000 00100
Q ss_pred cccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCCCC
Q 037566 309 TCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 309 ~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g~i 359 (360)
.....+|++|+++ |||+|+++++|+|+++++||+++|.+
T Consensus 317 ------------~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~ 356 (378)
T PLN00016 317 ------------DQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRD 356 (378)
T ss_pred ------------ccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 1134679999987 79999999999999999999999875
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=243.23 Aligned_cols=287 Identities=21% Similarity=0.242 Sum_probs=202.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C-C--CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W-F--PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~-~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
|||+|||++||+ +||+|++++|++.+. . + ..++++ .+.+||+|++++.++++|| |.|||+
T Consensus 17 fIgswivk~LL~------rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~-l~~aDL~d~~sf~~ai~gc----dgVfH~ 85 (327)
T KOG1502|consen 17 FIGSWIVKLLLS------RGYTVRGTVRDPEDEKKTEHLRKLEGAKERLK-LFKADLLDEGSFDKAIDGC----DGVFHT 85 (327)
T ss_pred HHHHHHHHHHHh------CCCEEEEEEcCcchhhhHHHHHhcccCcccce-EEeccccccchHHHHHhCC----CEEEEe
Confidence 699999999999 999999999998652 1 1 235688 9999999999999999997 689999
Q ss_pred eeecC---CC-hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 72 MFQRL---KS-EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 72 A~~~~---~~-~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
|.... .+ +.+..+.+|.||.|+|+||.+. +.||||||+||.++-... +........++|++--.+
T Consensus 86 Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~----~sVkrvV~TSS~aAv~~~-------~~~~~~~~vvdE~~wsd~ 154 (327)
T KOG1502|consen 86 ASPVDFDLEDPEKELIDPAVKGTKNVLEACKKT----KSVKRVVYTSSTAAVRYN-------GPNIGENSVVDEESWSDL 154 (327)
T ss_pred CccCCCCCCCcHHhhhhHHHHHHHHHHHHHhcc----CCcceEEEeccHHHhccC-------CcCCCCCcccccccCCcH
Confidence 98422 12 4479999999999999999997 269999999997665432 111113457888874221
Q ss_pred ----CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 148 ----FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 148 ----~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
.....|..+|.++| ...+++.+++.|+.|+||......+... ..+...+ .|..-.+++.
T Consensus 155 ~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~-~~~l~~i---~G~~~~~~n~------ 224 (327)
T KOG1502|consen 155 DFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSL-NALLKLI---KGLAETYPNF------ 224 (327)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhH-HHHHHHH---hcccccCCCC------
Confidence 11246888898888 4568999999999999998754222211 1111111 2322222222
Q ss_pred cccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHH
Q 037566 217 FCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVE 296 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (360)
...++|++|+|.|+++|.+.+.+. +.|.+ .+...++.|+.+.+.+.+-.... +-
T Consensus 225 ~~~~VdVrDVA~AHv~a~E~~~a~-GRyic-~~~~~~~~ei~~~l~~~~P~~~i--------p~---------------- 278 (327)
T KOG1502|consen 225 WLAFVDVRDVALAHVLALEKPSAK-GRYIC-VGEVVSIKEIADILRELFPDYPI--------PK---------------- 278 (327)
T ss_pred ceeeEeHHHHHHHHHHHHcCcccC-ceEEE-ecCcccHHHHHHHHHHhCCCCCC--------CC----------------
Confidence 234899999999999999988776 45855 45556699999988888743221 10
Q ss_pred HhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCCC
Q 037566 297 KHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360 (360)
Q Consensus 297 ~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~ip 360 (360)
+. ...... . .....+|.+|++++||.-.++++|++.++++++++.|.++
T Consensus 279 ~~----~~~~~~------~-----~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~~~~~l~ 327 (327)
T KOG1502|consen 279 KN----AEEHEG------F-----LTSFKVSSEKLKSLGGFKFRPLEETLSDTVESLREKGLLL 327 (327)
T ss_pred CC----Cccccc------c-----ccccccccHHHHhcccceecChHHHHHHHHHHHHHhcCCC
Confidence 00 000000 0 0123679999999985558999999999999999999874
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-31 Score=246.35 Aligned_cols=268 Identities=13% Similarity=0.120 Sum_probs=196.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
+||++|+++|++ +|++|++++|+ .+|+.|++++.+++++++ +|+|||+|+....
T Consensus 10 ~iG~~l~~~l~~------~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~--~d~vi~~a~~~~~~~~ 66 (287)
T TIGR01214 10 QLGRELVQQLSP------EGRVVVALTSS---------------QLDLTDPEALERLLRAIR--PDAVVNTAAYTDVDGA 66 (287)
T ss_pred HHHHHHHHHHHh------cCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCC--CCEEEECCcccccccc
Confidence 589999999999 89999999874 358889999999999875 7999999985321
Q ss_pred --ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 78 --SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 78 --~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.++..+++|+.+|.|++++|.+. +. +||++||..+|+.. ...|++|+++.. |.+.|+.
T Consensus 67 ~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-~~v~~Ss~~vy~~~------------~~~~~~E~~~~~--~~~~Y~~ 126 (287)
T TIGR01214 67 ESDPEKAFAVNALAPQNLARAAARH-----GA-RLVHISTDYVFDGE------------GKRPYREDDATN--PLNVYGQ 126 (287)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeeeeeecCC------------CCCCCCCCCCCC--CcchhhH
Confidence 35567899999999999999876 44 89999999999742 245789998764 4667999
Q ss_pred HHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIW 232 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~ 232 (360)
+|..+| ...+++++|+||++||||++.. +.... +...+ ..+.++...|+ ...++++++|+|++++.
T Consensus 127 ~K~~~E~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~--~~~~~--~~~~~~~~~~~-----~~~~~v~v~Dva~a~~~ 195 (287)
T TIGR01214 127 SKLAGEQAIRAAGPNALIVRTSWLYGGGGGR--NFVRT--MLRLA--GRGEELRVVDD-----QIGSPTYAKDLARVIAA 195 (287)
T ss_pred HHHHHHHHHHHhCCCeEEEEeeecccCCCCC--CHHHH--HHHHh--hcCCCceEecC-----CCcCCcCHHHHHHHHHH
Confidence 999888 4458899999999999998532 11111 11111 12445555564 34688999999999999
Q ss_pred HHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccc
Q 037566 233 AATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFE 312 (360)
Q Consensus 233 a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 312 (360)
++..+...+++|||++++.+|+.|+++.+++.+|.+.... +.+...... + .... .+...
T Consensus 196 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~----~~~~~~~~~-----~----~~~~---~~~~~----- 254 (287)
T TIGR01214 196 LLQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLL----HPQEVKPIS-----S----KEYP---RPARR----- 254 (287)
T ss_pred HHhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccc----cCceeEeec-----H----HHcC---CCCCC-----
Confidence 9876545689999999999999999999999999765421 111000000 0 0000 00000
Q ss_pred hhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHH
Q 037566 313 ALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKK 352 (360)
Q Consensus 313 ~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~ 352 (360)
.....+|++|+|+ +|| +..+++++|.++++.
T Consensus 255 --------~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~~~ 286 (287)
T TIGR01214 255 --------PAYSVLDNTKLVKTLGT-PLPHWREALRAYLQE 286 (287)
T ss_pred --------CCccccchHHHHHHcCC-CCccHHHHHHHHHhh
Confidence 1145789999988 699 567999999998753
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-30 Score=241.60 Aligned_cols=288 Identities=14% Similarity=0.095 Sum_probs=203.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CC---CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WF---PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~---~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
+||++|+++|++ +|++|++++|..... .. ...+++ ++.+|++|++++.++++..+ +|+|+|+|+.
T Consensus 10 ~iG~~l~~~l~~------~g~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~--~d~vv~~ag~ 80 (328)
T TIGR01179 10 YIGSHTVRQLLE------SGHEVVVLDNLSNGSPEALKRGERITRVT-FVEGDLRDRELLDRLFEEHK--IDAVIHFAGL 80 (328)
T ss_pred HHHHHHHHHHHh------CCCeEEEEeCCCccchhhhhhhccccceE-EEECCCCCHHHHHHHHHhCC--CcEEEECccc
Confidence 589999999998 899999887643221 01 012578 88999999999999988643 7999999985
Q ss_pred cC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 75 RL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 75 ~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
.. .++.+.+++|+.++.+++++|.+. ++++||++||..+||.. ...+++|+++.. |
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~ss~~~~g~~------------~~~~~~e~~~~~--~ 141 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-----GVKKFIFSSSAAVYGEP------------SSIPISEDSPLG--P 141 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhc-----CCCEEEEecchhhcCCC------------CCCCccccCCCC--C
Confidence 32 245567899999999999999876 68899999999999843 234688988765 4
Q ss_pred CCcHHHHHHHHh-------cC-CCCcEEEEcCCCeeecCCCCcc-----hhHHHHHHHHHHHhhcCCCeeeeCCcc---c
Q 037566 150 NFYYAVEDIAAS-------YS-PAVTYSVHRSSIIIGASSRSLN-----NSLLTLAVYATICRHQGLPFRYLGNKY---T 213 (360)
Q Consensus 150 ~~~Y~~ek~l~e-------~~-~~~~~~ilRp~~vyGp~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~G~~~---~ 213 (360)
...|+.+|...| +. .+++++++||++||||...... +....+............++...|+.. .
T Consensus 142 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (328)
T TIGR01179 142 INPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPD 221 (328)
T ss_pred CCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCC
Confidence 567888887776 22 6899999999999999642210 000011111111111223333333210 0
Q ss_pred ccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHH
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIW 291 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (360)
-...++++|++|+++++..++... ...+++||+++++++|++|+++.+++.+|.+..... .+
T Consensus 222 g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~--~~-------------- 285 (328)
T TIGR01179 222 GTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVEL--AP-------------- 285 (328)
T ss_pred CceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEe--CC--------------
Confidence 124578999999999998887542 234799999999999999999999999997543110 00
Q ss_pred HHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccc-cHHHHHHHHHHHHHC
Q 037566 292 DEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFAD-TMKSIRTWVKKLREM 356 (360)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~-~~~~l~~~~~~~~~~ 356 (360)
..... .....+|++|+++ +||+|.++ ++++++++++|++++
T Consensus 286 -----------~~~~~-------------~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 286 -----------RRPGD-------------PASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred -----------CCCcc-------------ccchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence 00000 0134679999976 79999998 999999999999764
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=236.12 Aligned_cols=281 Identities=7% Similarity=0.014 Sum_probs=191.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCCh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSE 79 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~ 79 (360)
+||++|+++|++ +||+|++++|++... .+...+++ ++.+|++|++++.++++++ |+|||+++....++
T Consensus 11 ~iG~~lv~~Ll~------~g~~V~~l~R~~~~~~~l~~~~v~-~v~~Dl~d~~~l~~al~g~----d~Vi~~~~~~~~~~ 79 (317)
T CHL00194 11 TLGRQIVRQALD------EGYQVRCLVRNLRKASFLKEWGAE-LVYGDLSLPETLPPSFKGV----TAIIDASTSRPSDL 79 (317)
T ss_pred HHHHHHHHHHHH------CCCeEEEEEcChHHhhhHhhcCCE-EEECCCCCHHHHHHHHCCC----CEEEECCCCCCCCc
Confidence 589999999999 899999999985432 11235799 9999999999999999984 79999976544455
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA 159 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l 159 (360)
..+.++|+.|+.|+++||+++ +++|||++||..++. .+ .+.|..+|..
T Consensus 80 ~~~~~~~~~~~~~l~~aa~~~-----gvkr~I~~Ss~~~~~----------------------~~-----~~~~~~~K~~ 127 (317)
T CHL00194 80 YNAKQIDWDGKLALIEAAKAA-----KIKRFIFFSILNAEQ----------------------YP-----YIPLMKLKSD 127 (317)
T ss_pred cchhhhhHHHHHHHHHHHHHc-----CCCEEEEeccccccc----------------------cC-----CChHHHHHHH
Confidence 678899999999999999987 899999998742210 00 1125555655
Q ss_pred Hh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcC
Q 037566 160 AS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATT 236 (360)
Q Consensus 160 ~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~ 236 (360)
.| +..+++++|+||+.+|+.-. ... ....+ .+.++.+.|. . ...+++|++|+|++++.++..
T Consensus 128 ~e~~l~~~~l~~tilRp~~~~~~~~----~~~----~~~~~---~~~~~~~~~~-~---~~~~~i~v~Dva~~~~~~l~~ 192 (317)
T CHL00194 128 IEQKLKKSGIPYTIFRLAGFFQGLI----SQY----AIPIL---EKQPIWITNE-S---TPISYIDTQDAAKFCLKSLSL 192 (317)
T ss_pred HHHHHHHcCCCeEEEeecHHhhhhh----hhh----hhhhc---cCCceEecCC-C---CccCccCHHHHHHHHHHHhcC
Confidence 55 45789999999998886311 100 00011 1334433332 2 446899999999999988877
Q ss_pred CCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhh
Q 037566 237 DRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNT 316 (360)
Q Consensus 237 ~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~ 316 (360)
+...|++|||++++.+|++|+++.+++.+|.+.... ..|.++...+. .|..+ .++.+..-..+.. -.
T Consensus 193 ~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~--~vp~~~~~~~~----~~~~~---~~~~~~~~~~l~~----~~ 259 (317)
T CHL00194 193 PETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKIS--RVPLFLLKLLR----QITGF---FEWTWNISDRLAF----VE 259 (317)
T ss_pred ccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEE--eCCHHHHHHHH----HHHhh---cccchhhHHHHHH----HH
Confidence 666799999999999999999999999999865421 13444433332 22111 1111100000000 00
Q ss_pred hhccccccccchhHHHH-cCCCcc--cccHHHHHHHHHH
Q 037566 317 VLHLQFQHVSSMNKSRE-FGFFGF--ADTMKSIRTWVKK 352 (360)
Q Consensus 317 ~~~~~~~~~~d~~Kar~-lG~~p~--~~~~~~l~~~~~~ 352 (360)
++....+..++.+++++ +|+.|. .++++++++.++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~ 298 (317)
T CHL00194 260 ILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFER 298 (317)
T ss_pred HHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHH
Confidence 11122245678889977 699984 7889998887753
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=251.17 Aligned_cols=309 Identities=11% Similarity=0.047 Sum_probs=203.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChH------HHHHHHccCCCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDST------DTTQKLSSISQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~------~l~~~l~~~~~~v~~ 67 (360)
|||+||+++|++ ...|++|++++|++.... ....+++ ++.+|++|++ .+.++ ++ +|+
T Consensus 11 fIG~~lv~~Ll~----~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~-~~~~Dl~~~~~~~~~~~~~~l-~~----~D~ 80 (657)
T PRK07201 11 FIGRRLVSRLLD----RRREATVHVLVRRQSLSRLEALAAYWGADRVV-PLVGDLTEPGLGLSEADIAEL-GD----IDH 80 (657)
T ss_pred HHHHHHHHHHHh----cCCCCEEEEEECcchHHHHHHHHHhcCCCcEE-EEecccCCccCCcCHHHHHHh-cC----CCE
Confidence 589999999993 017899999999643210 0125789 9999999952 34443 44 689
Q ss_pred EEEeeeec--CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 68 LFWVMFQR--LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 68 V~h~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
|||+|+.. ..+.....++|+.||.+++++|.+. ++++|||+||..+||.. ..+.+|+...
T Consensus 81 Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~~SS~~v~g~~-------------~~~~~e~~~~ 142 (657)
T PRK07201 81 VVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-----QAATFHHVSSIAVAGDY-------------EGVFREDDFD 142 (657)
T ss_pred EEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-----CCCeEEEEeccccccCc-------------cCccccccch
Confidence 99999853 2356678899999999999999986 68999999999999842 1234555432
Q ss_pred CC-CCCCcHHHHHHHHh----cCCCCcEEEEcCCCeeecCCCCcch-hHHHHHHHHHHHhhc--CCCeeeeCCccccccc
Q 037566 146 LP-FPNFYYAVEDIAAS----YSPAVTYSVHRSSIIIGASSRSLNN-SLLTLAVYATICRHQ--GLPFRYLGNKYTWEHF 217 (360)
Q Consensus 146 ~p-~p~~~Y~~ek~l~e----~~~~~~~~ilRp~~vyGp~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~G~~~~~~~~ 217 (360)
.+ .+.+.|+.+|..+| ...+++++|+||++||||+...... ......++..+.+.. ...++..+.+. ..
T Consensus 143 ~~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 219 (657)
T PRK07201 143 EGQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG---GR 219 (657)
T ss_pred hhcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC---Ce
Confidence 21 23456999999888 3568999999999999986532111 000001111111111 11222334332 34
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCc---cCCCcCCCCCHHHHHHHhh---HHH
Q 037566 218 CDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEF---VPFDEKEKFDAVEMMKEKG---EIW 291 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~---~~~~~~~~~~~~~~~~~~~---~~~ 291 (360)
.++++++|+|++++.++..+...|++||+++++++|++|+++.+++.+|.+. +.. ..|..+...+.... ..+
T Consensus 220 ~~~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~ 297 (657)
T PRK07201 220 TNIVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFG--FLPGFVAAPLLAALGPVRRL 297 (657)
T ss_pred eeeeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccc--cCChHHHHHHhhhcchhhHH
Confidence 6899999999999988776666789999999999999999999999999876 321 24444433333311 111
Q ss_pred HH-HHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-c---CCCcccccHHHHHHHHHHHHH
Q 037566 292 DE-IVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-F---GFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 292 ~~-~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-l---G~~p~~~~~~~l~~~~~~~~~ 355 (360)
.. +.++.++.+. .+++ ..+...+|++|+++ | |+. .-.+++.+.+.++|+.+
T Consensus 298 ~~~~~~~~~~~~~---------~l~~---~~~~~~f~~~~~~~~L~~~~~~-~p~~~~~~~~~~~~~~~ 353 (657)
T PRK07201 298 RNAVATQLGIPPE---------VLDF---VNYPTTFDSRETRAALKGSGIE-VPRLASYAPRLWDYWER 353 (657)
T ss_pred HHHHHHhcCCCHH---------HHHh---ccCCCeeccHHHHHHhccCCcC-CCChHHHHHHHHHHHHh
Confidence 11 2223333221 1222 13467899999976 6 454 44677888888876644
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=236.57 Aligned_cols=233 Identities=11% Similarity=0.098 Sum_probs=167.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CC--------CCCCceeeEeeccCChHHHHHHHccCCCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WF--------PSSHVDHYITFDALDSTDTTQKLSSISQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~--------~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V 68 (360)
+||++|+++|++ +|++|++++|+.... .+ ...+++ ++.+|++|++++.++++++ |+|
T Consensus 64 fIG~~lv~~L~~------~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~-~v~~Dl~d~~~l~~~i~~~----d~V 132 (367)
T PLN02686 64 FLGLAIVDRLLR------HGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIW-TVMANLTEPESLHEAFDGC----AGV 132 (367)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhhhccccccCCceE-EEEcCCCCHHHHHHHHHhc----cEE
Confidence 589999999999 899999988864221 00 013578 9999999999999999884 789
Q ss_pred EEeeeecCC-----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccC--ccccccccCCcccCCcCCCCCCCCC
Q 037566 69 FWVMFQRLK-----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGT--KHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 69 ~h~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~--~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
||+|+.... ....+.++|+.||.|++++|.+. .+++||||+||. .+||.... . ..+.+++|
T Consensus 133 ~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~----~~v~r~V~~SS~~~~vyg~~~~-----~---~~~~~i~E 200 (367)
T PLN02686 133 FHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT----ESVRKCVFTSSLLACVWRQNYP-----H---DLPPVIDE 200 (367)
T ss_pred EecCeeecccccccccchhhhhhHHHHHHHHHHHHhc----CCccEEEEeccHHHhcccccCC-----C---CCCcccCC
Confidence 999985321 12456789999999999999874 269999999996 47874110 0 00133666
Q ss_pred CCCCC----CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 142 DSLRL----PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 142 ~~p~~----p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+++.. +.|.+.|+.+|+.+| +..+++++++||++||||++....... +...+ .+. +.+.|+
T Consensus 201 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~----~~~~~---~g~-~~~~g~ 272 (367)
T PLN02686 201 ESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTA----TIAYL---KGA-QEMLAD 272 (367)
T ss_pred CCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChh----HHHHh---cCC-CccCCC
Confidence 64321 124567999998887 346899999999999999864221111 11111 232 334565
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccHHHHHHHHHHHhCCCcc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~ 270 (360)
+. .+++|++|+|++++++++.+ ...|++| |++|+.+|++|+++.|++.+|.+..
T Consensus 273 g~-----~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~ 328 (367)
T PLN02686 273 GL-----LATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPIN 328 (367)
T ss_pred CC-----cCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCC
Confidence 43 36899999999999988642 3457789 8899999999999999999987543
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-29 Score=223.84 Aligned_cols=213 Identities=18% Similarity=0.223 Sum_probs=169.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCC--CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC--
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWF--PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-- 76 (360)
|||++|+++|++ +|++|+++.|++..... ...+++ ++.+|+.|.+.+.+++++.. +|+|||+|+...
T Consensus 9 ~iG~~l~~~l~~------~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~dl~~~~~~~~~~~~~~--~d~vi~~a~~~~~~ 79 (236)
T PF01370_consen 9 FIGSALVRQLLK------KGHEVIVLSRSSNSESFEEKKLNVE-FVIGDLTDKEQLEKLLEKAN--IDVVIHLAAFSSNP 79 (236)
T ss_dssp HHHHHHHHHHHH------TTTEEEEEESCSTGGHHHHHHTTEE-EEESETTSHHHHHHHHHHHT--ESEEEEEBSSSSHH
T ss_pred HHHHHHHHHHHH------cCCccccccccccccccccccceEE-EEEeeccccccccccccccC--ceEEEEeecccccc
Confidence 589999999999 99999999998765311 012789 99999999999999999874 799999998532
Q ss_pred ---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcH
Q 037566 77 ---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYY 153 (360)
Q Consensus 77 ---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y 153 (360)
.+....++.|+.++.|++++|.+. ++++|||+||+.+||.. ...+++|+++.. |.+.|
T Consensus 80 ~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~sS~~~y~~~------------~~~~~~e~~~~~--~~~~Y 140 (236)
T PF01370_consen 80 ESFEDPEEIIEANVQGTRNLLEAAREA-----GVKRFIFLSSASVYGDP------------DGEPIDEDSPIN--PLSPY 140 (236)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEGGGGTSS------------SSSSBETTSGCC--HSSHH
T ss_pred ccccccccccccccccccccccccccc-----ccccccccccccccccc------------cccccccccccc--ccccc
Confidence 256778899999999999999987 67999999999999863 246789999874 57779
Q ss_pred HHHHHHHh-------cCCCCcEEEEcCCCeeecC-CCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHH
Q 037566 154 AVEDIAAS-------YSPAVTYSVHRSSIIIGAS-SRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRV 225 (360)
Q Consensus 154 ~~ek~l~e-------~~~~~~~~ilRp~~vyGp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~d 225 (360)
+.+|...| +..+++++++||++||||+ .........+..+.. + ..+.++.++|++. ..+|++|++|
T Consensus 141 ~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~---~~~~~i~v~D 214 (236)
T PF01370_consen 141 GASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQ-A--LKGKPIKIPGDGS---QVRDFIHVDD 214 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHH-H--HTTSSEEEESTSS---CEEEEEEHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhHH-h--hcCCcccccCCCC---CccceEEHHH
Confidence 99888777 3358999999999999998 111122222211221 2 2467788889887 6789999999
Q ss_pred HHHHHHHHHcCCCCCCCceecc
Q 037566 226 LAEQQIWAATTDRAKNQAFNCT 247 (360)
Q Consensus 226 la~a~~~a~~~~~~~g~~yni~ 247 (360)
+|++++++++++.+.|++|||+
T Consensus 215 ~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 215 LAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp HHHHHHHHHHHSCTTTEEEEES
T ss_pred HHHHHHHHHhCCCCCCCEEEeC
Confidence 9999999998877679999996
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=219.62 Aligned_cols=268 Identities=13% Similarity=0.068 Sum_probs=175.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
+||++|+++|++ +|++|++++|++.... ... . ....|+.+ ..+.+++++ +|.|||+|+....
T Consensus 9 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~--~~~-~-~~~~~~~~-~~~~~~~~~----~D~Vvh~a~~~~~~~~ 73 (292)
T TIGR01777 9 FIGRALTQRLTK------DGHEVTILTRSPPAGA--NTK-W-EGYKPWAP-LAESEALEG----ADAVINLAGEPIADKR 73 (292)
T ss_pred hhhHHHHHHHHH------cCCEEEEEeCCCCCCC--ccc-c-eeeecccc-cchhhhcCC----CCEEEECCCCCccccc
Confidence 689999999999 8999999999865421 001 1 11123322 345556665 6899999985321
Q ss_pred ----ChhHhhhhhHHHHHHHHHHHHhhccCCCCc--cEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCC
Q 037566 78 ----SEEINISNNSTMFKNVMSVVVDSNKGRSRL--RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNF 151 (360)
Q Consensus 78 ----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v--~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~ 151 (360)
.+..++++|+.+|++++++|+++ ++ ++|+++||..+||.. ...+++|+.++. |..
T Consensus 74 ~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~~i~~S~~~~yg~~------------~~~~~~E~~~~~--~~~ 134 (292)
T TIGR01777 74 WTEERKQEIRDSRIDTTRALVEAIAAA-----EQKPKVFISASAVGYYGTS------------EDRVFTEEDSPA--GDD 134 (292)
T ss_pred CCHHHHHHHHhcccHHHHHHHHHHHhc-----CCCceEEEEeeeEEEeCCC------------CCCCcCcccCCC--CCC
Confidence 23567899999999999999986 44 457777777789842 235688888543 344
Q ss_pred cHHHHHHHHh------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHH
Q 037566 152 YYAVEDIAAS------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRV 225 (360)
Q Consensus 152 ~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~d 225 (360)
+|+..+...| +..+++++|+||++||||+++. .+.+. .. +....+.+ .|++. ..+++++++|
T Consensus 135 ~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~-~~~~~--~~---~~~~~~~~---~g~~~---~~~~~i~v~D 202 (292)
T TIGR01777 135 FLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGGA-LAKML--PP---FRLGLGGP---LGSGR---QWFSWIHIED 202 (292)
T ss_pred hHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCcch-hHHHH--HH---HhcCcccc---cCCCC---cccccEeHHH
Confidence 4543222222 3358999999999999997532 22111 01 11111111 35554 5689999999
Q ss_pred HHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCc
Q 037566 226 LAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKM 305 (360)
Q Consensus 226 la~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 305 (360)
+|+++..++.++. .+++||+++++++|++|+++.|++.+|.+... +++ .++... ..++. +..
T Consensus 203 va~~i~~~l~~~~-~~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~-----~~p--~~~~~~------~~~~~---~~~- 264 (292)
T TIGR01777 203 LVQLILFALENAS-ISGPVNATAPEPVRNKEFAKALARALHRPAFF-----PVP--AFVLRA------LLGEM---ADL- 264 (292)
T ss_pred HHHHHHHHhcCcc-cCCceEecCCCccCHHHHHHHHHHHhCCCCcC-----cCC--HHHHHH------Hhchh---hHH-
Confidence 9999999987643 35789999999999999999999999975432 222 111110 00000 000
Q ss_pred ccccccchhhhhhccccccccchhHHHHcCCCccc-ccHHHH
Q 037566 306 EEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFA-DTMKSI 346 (360)
Q Consensus 306 ~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~-~~~~~l 346 (360)
+ ..+...+++|+|++||+|++ +++|++
T Consensus 265 ------------~--~~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 265 ------------L--LKGQRVLPEKLLEAGFQFQYPDLDEAL 292 (292)
T ss_pred ------------H--hCCcccccHHHHhcCCeeeCcChhhcC
Confidence 0 12457899999999999999 588764
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-28 Score=247.44 Aligned_cols=248 Identities=17% Similarity=0.207 Sum_probs=178.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCChh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSEE 80 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~~ 80 (360)
+||++|+++|++ +|++|++++|+..... ..+++ ++.+|++|.+++.+++++ +|+|||+|+....
T Consensus 11 fIGs~La~~Ll~------~G~~Vv~l~R~~~~~~--~~~v~-~v~gDL~D~~~l~~al~~----vD~VVHlAa~~~~--- 74 (854)
T PRK05865 11 VLGRGLTARLLS------QGHEVVGIARHRPDSW--PSSAD-FIAADIRDATAVESAMTG----ADVVAHCAWVRGR--- 74 (854)
T ss_pred HHHHHHHHHHHH------CcCEEEEEECCchhhc--ccCce-EEEeeCCCHHHHHHHHhC----CCEEEECCCcccc---
Confidence 589999999999 8999999999754321 24688 999999999999999987 5899999975322
Q ss_pred HhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 037566 81 INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAA 160 (360)
Q Consensus 81 ~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~ 160 (360)
..++|+.||.|++++|.+. ++++|||+||.. ....|+++.
T Consensus 75 -~~~vNv~GT~nLLeAa~~~-----gvkr~V~iSS~~----------------------------------K~aaE~ll~ 114 (854)
T PRK05865 75 -NDHINIDGTANVLKAMAET-----GTGRIVFTSSGH----------------------------------QPRVEQMLA 114 (854)
T ss_pred -hHHHHHHHHHHHHHHHHHc-----CCCeEEEECCcH----------------------------------HHHHHHHHH
Confidence 5689999999999999986 789999998631 134455553
Q ss_pred hcCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCCCC
Q 037566 161 SYSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 240 (360)
Q Consensus 161 e~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~ 240 (360)
..+++++++||++||||+..+ .+ .. + ...++...|+.. ..+|++|++|+|++++.++..+...
T Consensus 115 --~~gl~~vILRp~~VYGP~~~~---~i-----~~-l---l~~~v~~~G~~~---~~~dfIhVdDVA~Ai~~aL~~~~~~ 177 (854)
T PRK05865 115 --DCGLEWVAVRCALIFGRNVDN---WV-----QR-L---FALPVLPAGYAD---RVVQVVHSDDAQRLLVRALLDTVID 177 (854)
T ss_pred --HcCCCEEEEEeceEeCCChHH---HH-----HH-H---hcCceeccCCCC---ceEeeeeHHHHHHHHHHHHhCCCcC
Confidence 358999999999999986311 11 10 1 122332234433 4568999999999999887655455
Q ss_pred CCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhcc
Q 037566 241 NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHL 320 (360)
Q Consensus 241 g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~ 320 (360)
+++|||++++.+|++|+++.+.+... . .+.+....... ...... .
T Consensus 178 ggvyNIgsg~~~Si~EIae~l~~~~~----~----v~~~~~~~~~~---------------~~~~~~----------~-- 222 (854)
T PRK05865 178 SGPVNLAAPGELTFRRIAAALGRPMV----P----IGSPVLRRVTS---------------FAELEL----------L-- 222 (854)
T ss_pred CCeEEEECCCcccHHHHHHHHhhhhc----c----CCchhhhhccc---------------hhhhhc----------c--
Confidence 78999999999999999998876431 0 11111000000 000000 0
Q ss_pred ccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 321 QFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 321 ~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.....+|++|+++ +||+|+++++|+|+++++||+.+
T Consensus 223 ~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r 259 (854)
T PRK05865 223 HSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR 259 (854)
T ss_pred cCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 1134789999987 79999999999999999999874
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-27 Score=205.87 Aligned_cols=297 Identities=16% Similarity=0.120 Sum_probs=216.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h 70 (360)
-|+.|++.||+ +|++|+++.|+.+.. ...++++. ++.|||+|...+.++++.++ ||-|||
T Consensus 14 DGsYLa~lLLe------kGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~-l~~gDLtD~~~l~r~l~~v~--PdEIYN 84 (345)
T COG1089 14 DGSYLAELLLE------KGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLH-LHYGDLTDSSNLLRILEEVQ--PDEIYN 84 (345)
T ss_pred chHHHHHHHHh------cCcEEEEEeeccccCCcccceeccccccCCceeE-EEeccccchHHHHHHHHhcC--chhhee
Confidence 48999999999 999999999985431 11345688 99999999999999999997 899999
Q ss_pred eeeec-----CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 71 VMFQR-----LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 71 ~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
+|+++ ..+|+...++|..||.|||||.+.. ++.--||..+||+..||.. ...|.+|+.|.
T Consensus 85 LaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~---~~~~~rfYQAStSE~fG~v------------~~~pq~E~TPF 149 (345)
T COG1089 85 LAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRIL---GEKKTRFYQASTSELYGLV------------QEIPQKETTPF 149 (345)
T ss_pred ccccccccccccCcceeeeechhHHHHHHHHHHHh---CCcccEEEecccHHhhcCc------------ccCccccCCCC
Confidence 99854 2478888899999999999999987 3324579999999999953 36789999998
Q ss_pred CCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 146 LPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
.| .++|+..|+.+. +++|+-.|.=+.+|.=+|..+. +...-...++ +.| +.....-.+.||.. ..
T Consensus 150 yP--rSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~av-a~I-k~G~q~~l~lGNld---Ak 222 (345)
T COG1089 150 YP--RSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAV-ARI-KLGLQDKLYLGNLD---AK 222 (345)
T ss_pred CC--CCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHH-HHH-HccccceEEecccc---cc
Confidence 75 778999999887 5689999999999999997653 3322222221 122 22222345678876 77
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHH
Q 037566 218 CDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEK 297 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
+|+-++.|-++++.+.+.++ ..+.|+|++|+..|++|+++...+..|+...-... ..... ..-.+
T Consensus 223 RDWG~A~DYVe~mwlmLQq~--~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~--------g~~e~-----g~da~ 287 (345)
T COG1089 223 RDWGHAKDYVEAMWLMLQQE--EPDDYVIATGETHSVREFVELAFEMVGIDLEWEGT--------GVDEK-----GVDAK 287 (345)
T ss_pred ccccchHHHHHHHHHHHccC--CCCceEEecCceeeHHHHHHHHHHHcCceEEEeec--------ccccc-----ccccc
Confidence 99999999999987766543 25889999999999999999999999976541100 00000 00001
Q ss_pred hC-----CCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 298 HG-----LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 298 ~~-----l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
.| .++.-+.+ +. .| -+..|.+||++ |||+|.++++|-++..+++.-+
T Consensus 288 ~G~~~V~idp~~fRP-aE---V~-------~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~ 340 (345)
T COG1089 288 TGKIIVEIDPRYFRP-AE---VD-------LLLGDPTKAKEKLGWRPEVSLEELVREMVEADLE 340 (345)
T ss_pred cCceeEEECccccCc-hh---hh-------hhcCCHHHHHHHcCCccccCHHHHHHHHHHHHHH
Confidence 11 01111111 00 12 24679999985 8999999999999998886543
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=218.12 Aligned_cols=248 Identities=15% Similarity=0.128 Sum_probs=178.9
Q ss_pred CchHHHHHHHhcCCCCCCCC--cEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGP--WKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
+||++|+++|++ +| ++|++++|+.... .....+++ ++.+|++|++++.+++++ +|+|||+|+
T Consensus 15 ~IG~~l~~~L~~------~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~-~v~~Dl~d~~~l~~~~~~----iD~Vih~Ag 83 (324)
T TIGR03589 15 SFGKAFISRLLE------NYNPKKIIIYSRDELKQWEMQQKFPAPCLR-FFIGDVRDKERLTRALRG----VDYVVHAAA 83 (324)
T ss_pred HHHHHHHHHHHH------hCCCcEEEEEcCChhHHHHHHHHhCCCcEE-EEEccCCCHHHHHHHHhc----CCEEEECcc
Confidence 589999999998 65 7899999875321 11124688 999999999999999987 589999998
Q ss_pred ecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 74 QRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 74 ~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
... .++.+++++|+.||.|++++|.+. ++++||++||...+ .
T Consensus 84 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-----~~~~iV~~SS~~~~----------------------------~ 130 (324)
T TIGR03589 84 LKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-----GVKRVVALSTDKAA----------------------------N 130 (324)
T ss_pred cCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeCCCCC----------------------------C
Confidence 532 255678999999999999999986 68899999874211 1
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCC-CeeeeCCccccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGL-PFRYLGNKYTWEHF 217 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~~ 217 (360)
|.+.|+.+|...| ...|++++++||++||||+. +..+ ... ...+ .+. ++++ +++. ..
T Consensus 131 p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-~~i~----~~~--~~~~-~~~~~~~i-~~~~---~~ 198 (324)
T TIGR03589 131 PINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-SVVP----FFK--SLKE-EGVTELPI-TDPR---MT 198 (324)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC-CcHH----HHH--HHHH-hCCCCeee-CCCC---ce
Confidence 2345888887766 24689999999999999864 2221 111 1111 243 4444 3333 56
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHH
Q 037566 218 CDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEK 297 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
+|++|++|+|++++.++... ..|++| ++++..+|+.|+++.+.+.+.......
T Consensus 199 r~~i~v~D~a~a~~~al~~~-~~~~~~-~~~~~~~sv~el~~~i~~~~~~~~~~~------------------------- 251 (324)
T TIGR03589 199 RFWITLEQGVNFVLKSLERM-LGGEIF-VPKIPSMKITDLAEAMAPECPHKIVGI------------------------- 251 (324)
T ss_pred EeeEEHHHHHHHHHHHHhhC-CCCCEE-ccCCCcEEHHHHHHHHHhhCCeeEeCC-------------------------
Confidence 79999999999999988653 357888 577788999999999988653322110
Q ss_pred hCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHH
Q 037566 298 HGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTW 349 (360)
Q Consensus 298 ~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~ 349 (360)
.+. |. ......|++|+++ +||+|++++++++.++
T Consensus 252 ---~~g-----------~~----~~~~~~~~~~~~~~lg~~~~~~l~~~~~~~ 286 (324)
T TIGR03589 252 ---RPG-----------EK----LHEVMITEDDARHTYELGDYYAILPSISFW 286 (324)
T ss_pred ---CCC-----------ch----hHhhhcChhhhhhhcCCCCeEEEccccccc
Confidence 000 00 0124679999976 7999999999998754
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=210.12 Aligned_cols=225 Identities=15% Similarity=0.134 Sum_probs=161.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CC--CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WF--PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ +||+|++++|++... .+ ...+++ ++.+|++|.+++.+++.++ +.|+|+
T Consensus 17 ~IG~~lv~~Ll~------~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~d~~~~~~~l~~~----d~v~~~ 85 (297)
T PLN02583 17 YVGFWLVKRLLS------RGYTVHAAVQKNGETEIEKEIRGLSCEEERLK-VFDVDPLDYHSILDALKGC----SGLFCC 85 (297)
T ss_pred HHHHHHHHHHHh------CCCEEEEEEcCchhhhHHHHHHhcccCCCceE-EEEecCCCHHHHHHHHcCC----CEEEEe
Confidence 589999999999 999999999853211 01 124688 9999999999999999985 688898
Q ss_pred eeecCC---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 72 MFQRLK---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 72 A~~~~~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
++.... +.++++++|+.||.|++++|.+. .+++|||++||.++|+.... +. ....+++|+++..+.
T Consensus 86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~----~~v~riV~~SS~~a~~~~~~-----~~--~~~~~~~E~~~~~~~ 154 (297)
T PLN02583 86 FDPPSDYPSYDEKMVDVEVRAAHNVLEACAQT----DTIEKVVFTSSLTAVIWRDD-----NI--STQKDVDERSWSDQN 154 (297)
T ss_pred CccCCcccccHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEecchHheecccc-----cC--CCCCCCCcccCCCHH
Confidence 753221 35678999999999999999875 25899999999877642100 00 023468888753221
Q ss_pred ----CCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 149 ----PNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 149 ----p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
+...|+.+|.++| +..+++++++||++||||+...... .+ .+.+..+ +++ .
T Consensus 155 ~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~---------~~---~~~~~~~-~~~-----~ 216 (297)
T PLN02583 155 FCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP---------YL---KGAAQMY-ENG-----V 216 (297)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh---------hh---cCCcccC-ccc-----C
Confidence 1225999999888 2468999999999999997632111 01 1222112 221 2
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhC
Q 037566 218 CDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFD 266 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g 266 (360)
..++|++|+|+++++|++.+.+. +.|+++++....+.++.+.+.+.+.
T Consensus 217 ~~~v~V~Dva~a~~~al~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~p 264 (297)
T PLN02583 217 LVTVDVNFLVDAHIRAFEDVSSY-GRYLCFNHIVNTEEDAVKLAQMLSP 264 (297)
T ss_pred cceEEHHHHHHHHHHHhcCcccC-CcEEEecCCCccHHHHHHHHHHhCC
Confidence 46899999999999999876554 4798988776667888888888764
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=214.38 Aligned_cols=263 Identities=14% Similarity=0.169 Sum_probs=175.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
+||++|+++|.+ +|++|+++.|. ..|++|.+++.+.++..+ +|+|+|+|+....
T Consensus 11 ~lG~~l~~~l~~------~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~--pd~Vin~aa~~~~~~c 67 (286)
T PF04321_consen 11 FLGSALARALKE------RGYEVIATSRS---------------DLDLTDPEAVAKLLEAFK--PDVVINCAAYTNVDAC 67 (286)
T ss_dssp HHHHHHHHHHTT------TSEEEEEESTT---------------CS-TTSHHHHHHHHHHH----SEEEE------HHHH
T ss_pred HHHHHHHHHHhh------CCCEEEEeCch---------------hcCCCCHHHHHHHHHHhC--CCeEeccceeecHHhh
Confidence 489999999998 89999999764 348889999999998876 7999999986432
Q ss_pred --ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 78 --SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 78 --~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
+++..+++|+.++.+|.++|.+. +. ++||+||..||.+. ...|.+|++++. |.+.||.
T Consensus 68 e~~p~~a~~iN~~~~~~la~~~~~~-----~~-~li~~STd~VFdG~------------~~~~y~E~d~~~--P~~~YG~ 127 (286)
T PF04321_consen 68 EKNPEEAYAINVDATKNLAEACKER-----GA-RLIHISTDYVFDGD------------KGGPYTEDDPPN--PLNVYGR 127 (286)
T ss_dssp HHSHHHHHHHHTHHHHHHHHHHHHC-----T--EEEEEEEGGGS-SS------------TSSSB-TTS------SSHHHH
T ss_pred hhChhhhHHHhhHHHHHHHHHHHHc-----CC-cEEEeeccEEEcCC------------cccccccCCCCC--CCCHHHH
Confidence 67789999999999999999986 43 89999999999642 356799999865 5889999
Q ss_pred HHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIW 232 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~ 232 (360)
+|+.+| ....-.++|+|++.+||+...++...+ ...+ ..+.++....+ .....++++|+|++++.
T Consensus 128 ~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~-----~~~~--~~~~~i~~~~d-----~~~~p~~~~dlA~~i~~ 195 (286)
T PF04321_consen 128 SKLEGEQAVRAACPNALILRTSWVYGPSGRNFLRWL-----LRRL--RQGEPIKLFDD-----QYRSPTYVDDLARVILE 195 (286)
T ss_dssp HHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHH-----HHHH--HCTSEEEEESS-----CEE--EEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEecceecccCCCchhhhH-----HHHH--hcCCeeEeeCC-----ceeCCEEHHHHHHHHHH
Confidence 999999 222338999999999999544432221 1112 24666666655 45788999999999998
Q ss_pred HHcCCCC---CCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCccccc
Q 037566 233 AATTDRA---KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEIT 309 (360)
Q Consensus 233 a~~~~~~---~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 309 (360)
++..... ..++||+++++.+|+.|+...+++.+|.+.... .|.+. ..+...
T Consensus 196 l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i---~~~~~----------------------~~~~~~- 249 (286)
T PF04321_consen 196 LIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELI---KPVSS----------------------SEFPRA- 249 (286)
T ss_dssp HHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEE---EEESS----------------------TTSTTS-
T ss_pred HHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceE---Eeccc----------------------ccCCCC-
Confidence 8764322 358999999999999999999999999876322 11110 000000
Q ss_pred ccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHH
Q 037566 310 CFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKL 353 (360)
Q Consensus 310 ~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~ 353 (360)
...+.+..+|++|+++ +|+++ .+.+++|++.++.|
T Consensus 250 --------~~rp~~~~L~~~kl~~~~g~~~-~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 250 --------APRPRNTSLDCRKLKNLLGIKP-PPWREGLEELVKQY 285 (286)
T ss_dssp --------SGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred --------CCCCCcccccHHHHHHccCCCC-cCHHHHHHHHHHHh
Confidence 0013367899999988 59984 78999999998876
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=223.56 Aligned_cols=240 Identities=12% Similarity=0.133 Sum_probs=168.3
Q ss_pred CchHHHHHHHhcCCCCCCCC---cEEEEEecCCCCCC--------------C--------------CCCCceeeEeeccC
Q 037566 1 MAGLSLAEALKNNPTIPGGP---WKVYGTARRPPPSW--------------F--------------PSSHVDHYITFDAL 49 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g---~~V~~l~r~~~~~~--------------~--------------~~~~v~~~v~gDl~ 49 (360)
|||++|+++||. .+ -+|+++.|...... + ...+++ ++.||++
T Consensus 22 FlG~~ll~~LL~------~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~-~i~GDl~ 94 (491)
T PLN02996 22 FLAKIFVEKILR------VQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT-PVPGDIS 94 (491)
T ss_pred HHHHHHHHHHHh------hCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE-EEecccC
Confidence 689999999996 32 36899998653210 0 015789 9999998
Q ss_pred C-------hHHHHHHHccCCCCccEEEEeeeecC--CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcccc
Q 037566 50 D-------STDTTQKLSSISQEVTHLFWVMFQRL--KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120 (360)
Q Consensus 50 d-------~~~l~~~l~~~~~~v~~V~h~A~~~~--~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg 120 (360)
+ .+.+.+++++ +|+|||+|+... .+++...++|+.||.||+++|.+. .++++|||+||+.|||
T Consensus 95 ~~~LGLs~~~~~~~l~~~----vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~k~~V~vST~~vyG 166 (491)
T PLN02996 95 YDDLGVKDSNLREEMWKE----IDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKC----VKVKMLLHVSTAYVCG 166 (491)
T ss_pred CcCCCCChHHHHHHHHhC----CCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEEeeeEEec
Confidence 4 4446667776 689999998532 367788999999999999999874 3689999999999998
Q ss_pred ccccCCcccCCcCCCCCCCC--CC---------------------------C---------------C--CCCCCCCcHH
Q 037566 121 GPVFDPSLVGQLIGHDPPFK--ED---------------------------S---------------L--RLPFPNFYYA 154 (360)
Q Consensus 121 ~~~~~~~~~g~~~~~~~p~~--E~---------------------------~---------------p--~~p~p~~~Y~ 154 (360)
... |.. ...+++ ++ . + ....|+ .|+
T Consensus 167 ~~~------~~i--~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn-~Y~ 237 (491)
T PLN02996 167 EKS------GLI--LEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPN-TYV 237 (491)
T ss_pred CCC------cee--eeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCC-chH
Confidence 531 100 001111 00 0 0 001123 599
Q ss_pred HHHHHHh-----cCCCCcEEEEcCCCeeecCCCCcchhH----HHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHH
Q 037566 155 VEDIAAS-----YSPAVTYSVHRSSIIIGASSRSLNNSL----LTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRV 225 (360)
Q Consensus 155 ~ek~l~e-----~~~~~~~~ilRp~~vyGp~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~d 225 (360)
.+|.++| ...+++++|+||++||||+........ .+-.+...+ ..|....++|++. ..+|+++|+|
T Consensus 238 ~TK~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~--~~g~~~~~~gdg~---~~~D~v~Vdd 312 (491)
T PLN02996 238 FTKAMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGY--GKGKLTCFLADPN---SVLDVIPADM 312 (491)
T ss_pred hhHHHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHh--ccceEeEEecCCC---eecceecccH
Confidence 9999998 345899999999999999753311111 111111111 2355556778886 7799999999
Q ss_pred HHHHHHHHHcCC--C-CCCCceeccCC--CcccHHHHHHHHHHHhCCCc
Q 037566 226 LAEQQIWAATTD--R-AKNQAFNCTNG--DVFTWKSLWKLLSEIFDVEF 269 (360)
Q Consensus 226 la~a~~~a~~~~--~-~~g~~yni~~g--~~~s~~el~~~ia~~~g~~~ 269 (360)
+|++++.++... . ..+++|||++| .++||.|+.+.+.++++..+
T Consensus 313 vv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p 361 (491)
T PLN02996 313 VVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP 361 (491)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence 999999887642 2 24689999999 89999999999999998643
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=190.29 Aligned_cols=275 Identities=17% Similarity=0.174 Sum_probs=201.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
++|++|++.+-+ +|.+ ...|. -+. ...+||++.++.++.++..+ ++||+|+|+...
T Consensus 12 LVGsAi~~vv~~------q~~~--------~e~wv---f~~-skd~DLt~~a~t~~lF~~ek--PthVIhlAAmVGGlf~ 71 (315)
T KOG1431|consen 12 LVGSAIVKVVQE------QGFD--------DENWV---FIG-SKDADLTNLADTRALFESEK--PTHVIHLAAMVGGLFH 71 (315)
T ss_pred hHHHHHHHHHHh------cCCC--------CcceE---Eec-cccccccchHHHHHHHhccC--CceeeehHhhhcchhh
Confidence 479999999887 5531 11110 112 45689999999999998876 899999998532
Q ss_pred --CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC--CCC-CC
Q 037566 77 --KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL--PFP-NF 151 (360)
Q Consensus 77 --~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~--p~p-~~ 151 (360)
.-+.+++++|+..--|+|..|-+. |++++|++-|+..|-.. ...|++|++-.. |.| ++
T Consensus 72 N~~ynldF~r~Nl~indNVlhsa~e~-----gv~K~vsclStCIfPdk------------t~yPIdEtmvh~gpphpsN~ 134 (315)
T KOG1431|consen 72 NNTYNLDFIRKNLQINDNVLHSAHEH-----GVKKVVSCLSTCIFPDK------------TSYPIDETMVHNGPPHPSNF 134 (315)
T ss_pred cCCCchHHHhhcceechhHHHHHHHh-----chhhhhhhcceeecCCC------------CCCCCCHHHhccCCCCCCch
Confidence 246789999999999999999998 89999999888888431 357899987332 223 66
Q ss_pred cHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCC-Cc-chhHHHHHHHHHH-HhhcCC-CeeeeCCcccccccccc
Q 037566 152 YYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSR-SL-NNSLLTLAVYATI-CRHQGL-PFRYLGNKYTWEHFCDM 220 (360)
Q Consensus 152 ~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~-~~-~~~~~~~~~~~~~-~~~~~~-~~~~~G~~~~~~~~~d~ 220 (360)
.|+..|.+.. ..+|+.++.+-|+|||||.|. ++ ...+.+-.+...- .+..|. ++.+.|++. -++.|
T Consensus 135 gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~---PlRqF 211 (315)
T KOG1431|consen 135 GYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGS---PLRQF 211 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCC---hHHHH
Confidence 7887775544 467999999999999999874 22 2233332232211 122344 778889886 67899
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCceeccCCC--cccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHh
Q 037566 221 SDSRVLAEQQIWAATTDRAKNQAFNCTNGD--VFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKH 298 (360)
Q Consensus 221 ~~v~dla~a~~~a~~~~~~~g~~yni~~g~--~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (360)
+|++|+|++++|.+.+= ..=|-.|++.|+ .+|++|+.+++.+.+|...... |
T Consensus 212 iys~DLA~l~i~vlr~Y-~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~------------------~------- 265 (315)
T KOG1431|consen 212 IYSDDLADLFIWVLREY-EGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLV------------------W------- 265 (315)
T ss_pred hhHhHHHHHHHHHHHhh-cCccceEeccCccceeEHHHHHHHHHHHhCCCceEE------------------e-------
Confidence 99999999999998642 223667899988 8999999999999998765421 1
Q ss_pred CCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccc-cHHHHHHHHHHHHHC
Q 037566 299 GLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFAD-TMKSIRTWVKKLREM 356 (360)
Q Consensus 299 ~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~-~~~~l~~~~~~~~~~ 356 (360)
++.+.. . .+.-..|.+|++.+||.|+++ +++||.++++||.++
T Consensus 266 --DttK~D--G-----------q~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~Wy~~N 309 (315)
T KOG1431|consen 266 --DTTKSD--G-----------QFKKTASNSKLRSLLPDFKFTPLEQAISETVQWYLDN 309 (315)
T ss_pred --eccCCC--C-----------CcccccchHHHHHhCCCcccChHHHHHHHHHHHHHHh
Confidence 111110 0 123478999999999999997 999999999999764
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-23 Score=195.93 Aligned_cols=309 Identities=13% Similarity=0.045 Sum_probs=193.9
Q ss_pred CchHHHHHHHhcCCCCCCCC--cEEEEEecCCCCC-------------CC---C-C-CCceeeEeeccCCh------HHH
Q 037566 1 MAGLSLAEALKNNPTIPGGP--WKVYGTARRPPPS-------------WF---P-S-SHVDHYITFDALDS------TDT 54 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~~-------------~~---~-~-~~v~~~v~gDl~d~------~~l 54 (360)
+||++|+++|++ +| ++|++++|.+... .+ . . .+++ ++.+|++++ +.+
T Consensus 10 ~lG~~l~~~L~~------~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~~gl~~~~~ 82 (367)
T TIGR01746 10 FLGAYLLEELLR------RSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIE-VVAGDLSEPRLGLSDAEW 82 (367)
T ss_pred HHHHHHHHHHHh------CCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEE-EEeCCcCcccCCcCHHHH
Confidence 589999999998 77 6799999975421 00 0 1 4789 999999865 345
Q ss_pred HHHHccCCCCccEEEEeeeecC--CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCc
Q 037566 55 TQKLSSISQEVTHLFWVMFQRL--KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQL 132 (360)
Q Consensus 55 ~~~l~~~~~~v~~V~h~A~~~~--~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~ 132 (360)
.++.++ +|+|+|+|+... .+.+.+.++|+.|+.+++++|.+. ++++|+|+||.++|+...
T Consensus 83 ~~~~~~----~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-----~~~~~v~iSS~~v~~~~~--------- 144 (367)
T TIGR01746 83 ERLAEN----VDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-----RAKPLHYVSTISVLAAID--------- 144 (367)
T ss_pred HHHHhh----CCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-----CCceEEEEccccccCCcC---------
Confidence 555555 689999998532 345667889999999999999886 688999999999997421
Q ss_pred CCCCCCCCCCCCCCC---CCCCcHHHHHHHHh------cCCCCcEEEEcCCCeeecCCCCcchhHHHH-HHHHHHHhhcC
Q 037566 133 IGHDPPFKEDSLRLP---FPNFYYAVEDIAAS------YSPAVTYSVHRSSIIIGASSRSLNNSLLTL-AVYATICRHQG 202 (360)
Q Consensus 133 ~~~~~p~~E~~p~~p---~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~-~~~~~~~~~~~ 202 (360)
..+..|+.+..+ .+...|+++|..+| ...|++++++||+.|||+......+....+ .+.... ...+
T Consensus 145 ---~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~-~~~~ 220 (367)
T TIGR01746 145 ---LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGC-LALG 220 (367)
T ss_pred ---CCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHH-HHhC
Confidence 122344443221 22456898888777 234899999999999997432211111111 111111 1122
Q ss_pred CCeeeeCCcccccccccccCHHHHHHHHHHHHcCCCCC--CCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCH
Q 037566 203 LPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK--NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDA 280 (360)
Q Consensus 203 ~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~--g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~ 280 (360)
. ++.... ...++++++|+|++++.++..+... |++||+++++++|++|+++.+++ +|.+.. ..++
T Consensus 221 ~---~p~~~~---~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~------~~~~ 287 (367)
T TIGR01746 221 A---YPDSPE---LTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK------LVSF 287 (367)
T ss_pred C---CCCCCc---cccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCC------cCCH
Confidence 1 111111 2467899999999999887665432 79999999999999999999999 887544 2344
Q ss_pred HHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhh---c-c-ccccccchhHHHH----cCCCcccccHHHHHHHHH
Q 037566 281 VEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVL---H-L-QFQHVSSMNKSRE----FGFFGFADTMKSIRTWVK 351 (360)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~---~-~-~~~~~~d~~Kar~----lG~~p~~~~~~~l~~~~~ 351 (360)
..|+......- ...+ . .....+ ..++++.- . . .-...++++++++ +|+....-..+-++++++
T Consensus 288 ~~w~~~~~~~~----~~~~-~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
T TIGR01746 288 DEWLQRLEDSD----TAKR-D-PPRYPL--LPLLHFLGAGFEEPEFDTRNLDSRSTAEALEGDGIREPSITAPLLHLYLQ 359 (367)
T ss_pred HHHHHHHHHhh----hcCC-C-cccccc--hhhhhccCCCcccccccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 45544332110 0000 0 000000 01111110 0 0 0023566776643 465544445677899999
Q ss_pred HHHHCCCC
Q 037566 352 KLREMKII 359 (360)
Q Consensus 352 ~~~~~g~i 359 (360)
++++.|.|
T Consensus 360 ~~~~~~~~ 367 (367)
T TIGR01746 360 YLKEIGFL 367 (367)
T ss_pred HHHHcCCC
Confidence 99988864
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-23 Score=186.35 Aligned_cols=260 Identities=14% Similarity=0.202 Sum_probs=192.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
++|+.|+++|. .+++|++++|.. .||+|++.+.+.++... ||.|+|+|+....
T Consensus 11 qLG~~L~~~l~-------~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~--PDvVIn~AAyt~vD~a 66 (281)
T COG1091 11 QLGTELRRALP-------GEFEVIATDRAE---------------LDITDPDAVLEVIRETR--PDVVINAAAYTAVDKA 66 (281)
T ss_pred hHHHHHHHHhC-------CCceEEeccCcc---------------ccccChHHHHHHHHhhC--CCEEEECccccccccc
Confidence 47899988875 368999998743 59999999999999886 8999999986432
Q ss_pred --ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 78 --SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 78 --~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
+++..+.+|..|+.|+.++|.+. |. ++||+||--|+-+. ...|..|++++. |.++||+
T Consensus 67 E~~~e~A~~vNa~~~~~lA~aa~~~-----ga-~lVhiSTDyVFDG~------------~~~~Y~E~D~~~--P~nvYG~ 126 (281)
T COG1091 67 ESEPELAFAVNATGAENLARAAAEV-----GA-RLVHISTDYVFDGE------------KGGPYKETDTPN--PLNVYGR 126 (281)
T ss_pred cCCHHHHHHhHHHHHHHHHHHHHHh-----CC-eEEEeecceEecCC------------CCCCCCCCCCCC--ChhhhhH
Confidence 46778899999999999999997 43 69999998877431 346899999865 5889999
Q ss_pred HHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIW 232 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~ 232 (360)
+|+++| ...+-..+|+|.++|||...+|+...+ +. +. ..|.++...-| ++...+++.|+|+++..
T Consensus 127 sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tm-----l~-la-~~~~~l~vv~D-----q~gsPt~~~dlA~~i~~ 194 (281)
T COG1091 127 SKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTM-----LR-LA-KEGKELKVVDD-----QYGSPTYTEDLADAILE 194 (281)
T ss_pred HHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHH-----HH-Hh-hcCCceEEECC-----eeeCCccHHHHHHHHHH
Confidence 999999 456688999999999998654432211 11 11 24667666555 56788999999999988
Q ss_pred HHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccc
Q 037566 233 AATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFE 312 (360)
Q Consensus 233 a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 312 (360)
++.. ...+.+||+++...+||-|+...|.+.+|.+.... .+.... .++ .+..+
T Consensus 195 ll~~-~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~---~~~~~~---------------~~~---~~a~R----- 247 (281)
T COG1091 195 LLEK-EKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVI---EPIASA---------------EYP---TPAKR----- 247 (281)
T ss_pred HHhc-cccCcEEEEeCCCcccHHHHHHHHHHHhCCCcccc---cccccc---------------ccC---ccCCC-----
Confidence 7754 34455999999888999999999999999765321 111110 011 11111
Q ss_pred hhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHH
Q 037566 313 ALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKK 352 (360)
Q Consensus 313 ~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~ 352 (360)
+.+..+|++|+++ +|+. ..+.++++.+.++.
T Consensus 248 --------P~~S~L~~~k~~~~~g~~-~~~w~~~l~~~~~~ 279 (281)
T COG1091 248 --------PANSSLDTKKLEKAFGLS-LPEWREALKALLDE 279 (281)
T ss_pred --------CcccccchHHHHHHhCCC-CccHHHHHHHHHhh
Confidence 2245789999987 5776 56788888776553
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.3e-24 Score=205.06 Aligned_cols=216 Identities=14% Similarity=0.088 Sum_probs=161.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ +|++|++++|++.... ...++++ ++.+|++|++++.+++++...++|+|||+
T Consensus 71 ~IG~~l~~~Ll~------~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~-~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~~ 143 (390)
T PLN02657 71 YIGKFVVRELVR------RGYNVVAVAREKSGIRGKNGKEDTKKELPGAE-VVFGDVTDADSLRKVLFSEGDPVDVVVSC 143 (390)
T ss_pred HHHHHHHHHHHH------CCCEEEEEEechhhccccchhhHHhhhcCCce-EEEeeCCCHHHHHHHHHHhCCCCcEEEEC
Confidence 589999999999 8999999999764210 0125789 99999999999999998641016899999
Q ss_pred eeecCCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCC
Q 037566 72 MFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNF 151 (360)
Q Consensus 72 A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~ 151 (360)
++.......+.+++|+.++.|++++|++. +++|||++||..+|+. ..
T Consensus 144 aa~~~~~~~~~~~vn~~~~~~ll~aa~~~-----gv~r~V~iSS~~v~~p----------------------------~~ 190 (390)
T PLN02657 144 LASRTGGVKDSWKIDYQATKNSLDAGREV-----GAKHFVLLSAICVQKP----------------------------LL 190 (390)
T ss_pred CccCCCCCccchhhHHHHHHHHHHHHHHc-----CCCEEEEEeeccccCc----------------------------ch
Confidence 87433333456789999999999999986 7999999998765531 11
Q ss_pred cHHHHHHHHh---c--CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHH
Q 037566 152 YYAVEDIAAS---Y--SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVL 226 (360)
Q Consensus 152 ~Y~~ek~l~e---~--~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dl 226 (360)
.|...|...| . ..+++++|+||+++||+.. . .+..+ ..+.++.+.|++.. ....++|++|+
T Consensus 191 ~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~----~------~~~~~--~~g~~~~~~GdG~~--~~~~~I~v~Dl 256 (390)
T PLN02657 191 EFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLG----G------QVEIV--KDGGPYVMFGDGKL--CACKPISEADL 256 (390)
T ss_pred HHHHHHHHHHHHHHhccCCCCEEEEccHHHhcccH----H------HHHhh--ccCCceEEecCCcc--cccCceeHHHH
Confidence 2455555544 2 4789999999999998421 1 11112 14667666787752 12357999999
Q ss_pred HHHHHHHHcCCCCCCCceeccCC-CcccHHHHHHHHHHHhCCCcc
Q 037566 227 AEQQIWAATTDRAKNQAFNCTNG-DVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 227 a~a~~~a~~~~~~~g~~yni~~g-~~~s~~el~~~ia~~~g~~~~ 270 (360)
|++++.++..+...|++|||+++ +.+|++|+++.+++.+|.+..
T Consensus 257 A~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~ 301 (390)
T PLN02657 257 ASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPK 301 (390)
T ss_pred HHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCc
Confidence 99999888766667899999985 689999999999999998644
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.8e-22 Score=185.24 Aligned_cols=263 Identities=13% Similarity=0.038 Sum_probs=171.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
|||++|+++|++ +|++|+... +|+.|.+.+...++..+ +|+|||+|+...
T Consensus 20 fiG~~l~~~L~~------~g~~V~~~~------------------~~~~~~~~v~~~l~~~~--~D~ViH~Aa~~~~~~~ 73 (298)
T PLN02778 20 WIGGLLGKLCQE------QGIDFHYGS------------------GRLENRASLEADIDAVK--PTHVFNAAGVTGRPNV 73 (298)
T ss_pred HHHHHHHHHHHh------CCCEEEEec------------------CccCCHHHHHHHHHhcC--CCEEEECCcccCCCCc
Confidence 799999999998 899886432 23445555666666554 799999998532
Q ss_pred ----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCc
Q 037566 77 ----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFY 152 (360)
Q Consensus 77 ----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~ 152 (360)
.++.+++++|+.||.||+++|++. ++++ ++.||+.+||.... ...| ...+++|++++.+ |.+.
T Consensus 74 ~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-----gv~~-v~~sS~~vy~~~~~--~p~~----~~~~~~Ee~~p~~-~~s~ 140 (298)
T PLN02778 74 DWCESHKVETIRANVVGTLTLADVCRER-----GLVL-TNYATGCIFEYDDA--HPLG----SGIGFKEEDTPNF-TGSF 140 (298)
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCE-EEEecceEeCCCCC--CCcc----cCCCCCcCCCCCC-CCCc
Confidence 246678999999999999999987 6765 55567788874210 0000 1235788776543 4577
Q ss_pred HHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHH
Q 037566 153 YAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQ 229 (360)
Q Consensus 153 Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a 229 (360)
|+.+|.++| ... -...++|+..++|++.....++ +- .+. .+.++...+ .++++++|++++
T Consensus 141 Yg~sK~~~E~~~~~y-~~~~~lr~~~~~~~~~~~~~~f-----i~-~~~--~~~~~~~~~--------~s~~yv~D~v~a 203 (298)
T PLN02778 141 YSKTKAMVEELLKNY-ENVCTLRVRMPISSDLSNPRNF-----IT-KIT--RYEKVVNIP--------NSMTILDELLPI 203 (298)
T ss_pred hHHHHHHHHHHHHHh-hccEEeeecccCCcccccHHHH-----HH-HHH--cCCCeeEcC--------CCCEEHHHHHHH
Confidence 999999999 222 2578899988888753221111 11 121 233333222 267899999999
Q ss_pred HHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCccccc
Q 037566 230 QIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEIT 309 (360)
Q Consensus 230 ~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 309 (360)
++.++... . +++|||++++.+|++|+++.+++.+|.... + ..+.+.... +.. ..+.
T Consensus 204 l~~~l~~~-~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~-~---~~~~i~~~~------------~~~-~~~~----- 259 (298)
T PLN02778 204 SIEMAKRN-L-TGIYNFTNPGVVSHNEILEMYRDYIDPSFT-W---KNFTLEEQA------------KVI-VAPR----- 259 (298)
T ss_pred HHHHHhCC-C-CCeEEeCCCCcccHHHHHHHHHHHhCCCce-e---ccccHHHHH------------HHH-hCCC-----
Confidence 98887542 2 469999999999999999999999996432 1 111111000 000 0000
Q ss_pred ccchhhhhhccccccccchhHHHHc-CCCcccccHHHHHHHHHHHHHC
Q 037566 310 CFEALNTVLHLQFQHVSSMNKSREF-GFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 310 ~~~~~d~~~~~~~~~~~d~~Kar~l-G~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.+..+|++|++++ +=. ....+++++..++.+++.
T Consensus 260 ------------~~~~Ld~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~ 294 (298)
T PLN02778 260 ------------SNNELDTTKLKREFPEL-LPIKESLIKYVFEPNKKT 294 (298)
T ss_pred ------------ccccccHHHHHHhcccc-cchHHHHHHHHHHHHHhh
Confidence 1236899999874 443 235578888888888654
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-21 Score=194.11 Aligned_cols=234 Identities=12% Similarity=0.126 Sum_probs=160.3
Q ss_pred CchHHHHHHHhcCCCCCCCCc---EEEEEecCCCCC---------CC-------------------CCCCceeeEeeccC
Q 037566 1 MAGLSLAEALKNNPTIPGGPW---KVYGTARRPPPS---------WF-------------------PSSHVDHYITFDAL 49 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~---~V~~l~r~~~~~---------~~-------------------~~~~v~~~v~gDl~ 49 (360)
|||++|+++|++ .+. +|+++.|..... .. ...+++ .+.||++
T Consensus 130 FLGk~LlekLLr------~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~-~v~GDl~ 202 (605)
T PLN02503 130 FLAKVLIEKILR------TNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV-PVVGNVC 202 (605)
T ss_pred HHHHHHHHHHHH------hCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE-EEEeeCC
Confidence 689999999997 433 689999964321 00 024688 8999999
Q ss_pred ChH------HHHHHHccCCCCccEEEEeeeecC--CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccc
Q 037566 50 DST------DTTQKLSSISQEVTHLFWVMFQRL--KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMG 121 (360)
Q Consensus 50 d~~------~l~~~l~~~~~~v~~V~h~A~~~~--~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~ 121 (360)
++. ..+.+.++ +|+|||+|+... .+++...++|+.||.||+++|.+. .++++|||+||+.|||.
T Consensus 203 d~~LGLs~~~~~~L~~~----vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~----~~lk~fV~vSTayVyG~ 274 (605)
T PLN02503 203 ESNLGLEPDLADEIAKE----VDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKC----KKLKLFLQVSTAYVNGQ 274 (605)
T ss_pred CcccCCCHHHHHHHHhc----CCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHc----CCCCeEEEccCceeecC
Confidence 972 34444444 689999998533 357788999999999999999875 35889999999999986
Q ss_pred cccCCcccCCcCCCCCC---------------------CC------------CC--C----------------CCCCCCC
Q 037566 122 PVFDPSLVGQLIGHDPP---------------------FK------------ED--S----------------LRLPFPN 150 (360)
Q Consensus 122 ~~~~~~~~g~~~~~~~p---------------------~~------------E~--~----------------p~~p~p~ 150 (360)
.. |...+...| ++ |. . ...+.|+
T Consensus 275 ~~------G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pN 348 (605)
T PLN02503 275 RQ------GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQD 348 (605)
T ss_pred CC------CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCC
Confidence 31 110000011 00 10 0 0011233
Q ss_pred CcHHHHHHHHh-----cCCCCcEEEEcCCCe----------eecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 151 FYYAVEDIAAS-----YSPAVTYSVHRSSII----------IGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 151 ~~Y~~ek~l~e-----~~~~~~~~ilRp~~v----------yGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
.|..+|.++| ...++|++|+||+.| ||+++... .++.+. . ..|.--.++|++.
T Consensus 349 -tYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~----~p~~~~--~--g~G~lr~~~~~~~--- 416 (605)
T PLN02503 349 -TYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMM----DPIVLY--Y--GKGQLTGFLADPN--- 416 (605)
T ss_pred -hHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCcccc----chhhhh--e--eccceeEEEeCCC---
Confidence 4889999999 345899999999999 55543211 111111 1 1343333678776
Q ss_pred ccccccCHHHHHHHHHHHHcC-C---CCCCCceeccCC--CcccHHHHHHHHHHHhCC
Q 037566 216 HFCDMSDSRVLAEQQIWAATT-D---RAKNQAFNCTNG--DVFTWKSLWKLLSEIFDV 267 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~-~---~~~g~~yni~~g--~~~s~~el~~~ia~~~g~ 267 (360)
...|++.||.+|++++.|+.. . ...+++||++++ .+++|+|+.+.+.+++..
T Consensus 417 ~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 417 GVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred eeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 778999999999999988431 1 124789999998 899999999999988765
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.4e-21 Score=192.86 Aligned_cols=191 Identities=16% Similarity=0.172 Sum_probs=136.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCChh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSEE 80 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~~ 80 (360)
|||++|+++|++ +||+|++++|.+... ...+++ ++.+|++|+. +.+++++ +|.|||+|+.....
T Consensus 11 FIGs~La~~Ll~------~G~~Vi~ldr~~~~~--~~~~ve-~v~~Dl~d~~-l~~al~~----~D~VIHLAa~~~~~-- 74 (699)
T PRK12320 11 AVGRSVTRQLIA------AGHTVSGIAQHPHDA--LDPRVD-YVCASLRNPV-LQELAGE----ADAVIHLAPVDTSA-- 74 (699)
T ss_pred HHHHHHHHHHHh------CCCEEEEEeCChhhc--ccCCce-EEEccCCCHH-HHHHhcC----CCEEEEcCccCccc--
Confidence 689999999999 899999999875432 235789 9999999984 7777776 58999999864322
Q ss_pred HhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 037566 81 INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAA 160 (360)
Q Consensus 81 ~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~ 160 (360)
...+|+.||.|++++|++. ++ |+||+||. ||.+ + .|...|.++.
T Consensus 75 -~~~vNv~Gt~nLleAA~~~-----Gv-RiV~~SS~--~G~~------------------~---------~~~~aE~ll~ 118 (699)
T PRK12320 75 -PGGVGITGLAHVANAAARA-----GA-RLLFVSQA--AGRP------------------E---------LYRQAETLVS 118 (699)
T ss_pred -hhhHHHHHHHHHHHHHHHc-----CC-eEEEEECC--CCCC------------------c---------cccHHHHHHH
Confidence 2358999999999999886 66 69999865 4421 0 0112455544
Q ss_pred hcCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHh-hcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCCC
Q 037566 161 SYSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICR-HQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRA 239 (360)
Q Consensus 161 e~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~ 239 (360)
..+++++|+|+++||||+........ +..+ +.. ..+.++ .++|++|++++++.++..+
T Consensus 119 --~~~~p~~ILR~~nVYGp~~~~~~~r~--I~~~--l~~~~~~~pI-------------~vIyVdDvv~alv~al~~~-- 177 (699)
T PRK12320 119 --TGWAPSLVIRIAPPVGRQLDWMVCRT--VATL--LRSKVSARPI-------------RVLHLDDLVRFLVLALNTD-- 177 (699)
T ss_pred --hcCCCEEEEeCceecCCCCcccHhHH--HHHH--HHHHHcCCce-------------EEEEHHHHHHHHHHHHhCC--
Confidence 34689999999999999653211111 1111 111 112222 2479999999999887643
Q ss_pred CCCceeccCCCcccHHHHHHHHHHH
Q 037566 240 KNQAFNCTNGDVFTWKSLWKLLSEI 264 (360)
Q Consensus 240 ~g~~yni~~g~~~s~~el~~~ia~~ 264 (360)
.+++|||++|+.+|++|+++.++..
T Consensus 178 ~~GiyNIG~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 178 RNGVVDLATPDTTNVVTAWRLLRSV 202 (699)
T ss_pred CCCEEEEeCCCeeEHHHHHHHHHHh
Confidence 2459999999999999998888665
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-20 Score=164.30 Aligned_cols=273 Identities=15% Similarity=0.146 Sum_probs=184.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC--
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK-- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~-- 77 (360)
|||++|+.+|.+ .||+|++++|+++... ..+..++ .-+.+.+.... . +|+|+++|+....
T Consensus 9 lIG~~L~~~L~~------~gh~v~iltR~~~~~~~~~~~~v~--------~~~~~~~~~~~-~--~DavINLAG~~I~~r 71 (297)
T COG1090 9 LIGRALTARLRK------GGHQVTILTRRPPKASQNLHPNVT--------LWEGLADALTL-G--IDAVINLAGEPIAER 71 (297)
T ss_pred chhHHHHHHHHh------CCCeEEEEEcCCcchhhhcCcccc--------ccchhhhcccC-C--CCEEEECCCCccccc
Confidence 799999999998 8999999999987531 1122222 11234444442 1 6899999984221
Q ss_pred -----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCC-
Q 037566 78 -----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNF- 151 (360)
Q Consensus 78 -----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~- 151 (360)
..+...+.-+..|+.|+++..+. ..+++.+|-.|....||.. ....++|++|.. ..|
T Consensus 72 rWt~~~K~~i~~SRi~~T~~L~e~I~~~---~~~P~~~isaSAvGyYG~~------------~~~~~tE~~~~g--~~Fl 134 (297)
T COG1090 72 RWTEKQKEEIRQSRINTTEKLVELIAAS---ETKPKVLISASAVGYYGHS------------GDRVVTEESPPG--DDFL 134 (297)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHhc---cCCCcEEEecceEEEecCC------------CceeeecCCCCC--CChH
Confidence 23557778889999999998865 4578989988888999853 356789997642 233
Q ss_pred ---cHHHHHHHHh-cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHH
Q 037566 152 ---YYAVEDIAAS-YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLA 227 (360)
Q Consensus 152 ---~Y~~ek~l~e-~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla 227 (360)
.+.-|+.... ...|..+|++|.++|.|+.- .....+.++ |.. ..|-+ .|++.+| .+++|++|++
T Consensus 135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~G-GaL~~m~~~--fk~---glGG~---~GsGrQ~---~SWIhieD~v 202 (297)
T COG1090 135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDG-GALGKMLPL--FKL---GLGGK---LGSGRQW---FSWIHIEDLV 202 (297)
T ss_pred HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCC-cchhhhcch--hhh---ccCCc---cCCCCce---eeeeeHHHHH
Confidence 1233444333 45689999999999999853 333333222 211 12333 4899866 6899999999
Q ss_pred HHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCccc
Q 037566 228 EQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEE 307 (360)
Q Consensus 228 ~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 307 (360)
+++.++++++... ..||.+++.|++.+|+..++++.++.|...+ .|-.+.+. +.++
T Consensus 203 ~~I~fll~~~~ls-Gp~N~taP~PV~~~~F~~al~r~l~RP~~~~---vP~~~~rl----------~LGe---------- 258 (297)
T COG1090 203 NAILFLLENEQLS-GPFNLTAPNPVRNKEFAHALGRALHRPAILP---VPSFALRL----------LLGE---------- 258 (297)
T ss_pred HHHHHHHhCcCCC-CcccccCCCcCcHHHHHHHHHHHhCCCcccc---CcHHHHHH----------Hhhh----------
Confidence 9999999887666 5699999999999999999999999876532 22111111 1110
Q ss_pred ccccchhhhhhccccccccchhHHHHcCCCccc-ccHHHHHHHHH
Q 037566 308 ITCFEALNTVLHLQFQHVSSMNKSREFGFFGFA-DTMKSIRTWVK 351 (360)
Q Consensus 308 ~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~-~~~~~l~~~~~ 351 (360)
..+.++. ....=..|+.+.||+-++ |++++|.+.++
T Consensus 259 -----~a~~lL~---gQrvlP~kl~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 259 -----MADLLLG---GQRVLPKKLEAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred -----hHHHHhc---cchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence 0011121 234457777788998776 78999888654
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.8e-20 Score=188.98 Aligned_cols=257 Identities=14% Similarity=0.063 Sum_probs=169.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC---C
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---K 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---~ 77 (360)
|||++|+++|.+ +|++|. +..+||+|.+.+.+.++..+ +|+|||||+... .
T Consensus 391 ~iG~~l~~~L~~------~g~~v~------------------~~~~~l~d~~~v~~~i~~~~--pd~Vih~Aa~~~~~~~ 444 (668)
T PLN02260 391 WIGGLLGKLCEK------QGIAYE------------------YGKGRLEDRSSLLADIRNVK--PTHVFNAAGVTGRPNV 444 (668)
T ss_pred hHHHHHHHHHHh------CCCeEE------------------eeccccccHHHHHHHHHhhC--CCEEEECCcccCCCCC
Confidence 689999999998 788762 23357888888888888765 799999998542 1
Q ss_pred -----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCc
Q 037566 78 -----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFY 152 (360)
Q Consensus 78 -----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~ 152 (360)
++++.+++|+.||.||+++|++. +++ +++.||..||+.... +.. ....|++|++++.| |.+.
T Consensus 445 ~~~~~~~~~~~~~N~~gt~~l~~a~~~~-----g~~-~v~~Ss~~v~~~~~~---~~~---~~~~p~~E~~~~~~-~~~~ 511 (668)
T PLN02260 445 DWCESHKVETIRANVVGTLTLADVCREN-----GLL-MMNFATGCIFEYDAK---HPE---GSGIGFKEEDKPNF-TGSF 511 (668)
T ss_pred ChHHhCHHHHHHHHhHHHHHHHHHHHHc-----CCe-EEEEcccceecCCcc---ccc---ccCCCCCcCCCCCC-CCCh
Confidence 46678899999999999999987 676 566678889864200 000 01347888876543 4577
Q ss_pred HHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHH
Q 037566 153 YAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQ 229 (360)
Q Consensus 153 Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a 229 (360)
|+.+|+.+| ... -+..++|+..+||++..+..+++. .+.+ ...++.++. +..+.+|++++
T Consensus 512 Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~------~~~~-~~~~~~vp~---------~~~~~~~~~~~ 574 (668)
T PLN02260 512 YSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFIT------KISR-YNKVVNIPN---------SMTVLDELLPI 574 (668)
T ss_pred hhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHH------HHhc-cceeeccCC---------CceehhhHHHH
Confidence 999999998 222 367888999999764322223221 1112 222333321 24456667777
Q ss_pred HHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCccccc
Q 037566 230 QIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEIT 309 (360)
Q Consensus 230 ~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 309 (360)
++.++.. ..+++||++++..+||.|+++.|++.++.... . .|+...++- . ....+ +
T Consensus 575 ~~~l~~~--~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~-~---~~~~~~~~~--------~----~~~a~----r-- 630 (668)
T PLN02260 575 SIEMAKR--NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFK-W---SNFTLEEQA--------K----VIVAP----R-- 630 (668)
T ss_pred HHHHHHh--CCCceEEecCCCcCcHHHHHHHHHHhcCCccc-c---cccCHHHhh--------h----HhhCC----C--
Confidence 6666642 33689999999999999999999998842111 1 233332211 0 00001 1
Q ss_pred ccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHH
Q 037566 310 CFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVK 351 (360)
Q Consensus 310 ~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~ 351 (360)
+.. .+|++|+++ +|+ ..+.+|+|++.+.
T Consensus 631 -----------p~~-~l~~~k~~~~~~~--~~~~~~~l~~~~~ 659 (668)
T PLN02260 631 -----------SNN-EMDASKLKKEFPE--LLSIKESLIKYVF 659 (668)
T ss_pred -----------ccc-cccHHHHHHhCcc--ccchHHHHHHHHh
Confidence 113 789999987 588 4588888887764
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.7e-19 Score=196.38 Aligned_cols=321 Identities=13% Similarity=0.061 Sum_probs=191.8
Q ss_pred CchHHHHHHHhcCCCCCCCC----cEEEEEecCCCCCC-----------------CCCCCceeeEeeccCCh------HH
Q 037566 1 MAGLSLAEALKNNPTIPGGP----WKVYGTARRPPPSW-----------------FPSSHVDHYITFDALDS------TD 53 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g----~~V~~l~r~~~~~~-----------------~~~~~v~~~v~gDl~d~------~~ 53 (360)
|||+||+++|++ ++ +.|+++.|...... ....+++ ++.+|++++ +.
T Consensus 982 flG~~l~~~Ll~------~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~-~~~gDl~~~~lgl~~~~ 1054 (1389)
T TIGR03443 982 FLGSFILRDLLT------RRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIE-VVLGDLSKEKFGLSDEK 1054 (1389)
T ss_pred ccHHHHHHHHHh------cCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceE-EEeccCCCccCCcCHHH
Confidence 689999999998 55 78999999643210 0013788 999999754 44
Q ss_pred HHHHHccCCCCccEEEEeeeecC--CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCC
Q 037566 54 TTQKLSSISQEVTHLFWVMFQRL--KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQ 131 (360)
Q Consensus 54 l~~~l~~~~~~v~~V~h~A~~~~--~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~ 131 (360)
+.++.++ +|+|||+|+... .+...+...|+.||.|++++|.+. ++++|+|+||.++||..... ....
T Consensus 1055 ~~~l~~~----~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~vSS~~v~~~~~~~--~~~~ 1123 (1389)
T TIGR03443 1055 WSDLTNE----VDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-----KAKQFSFVSSTSALDTEYYV--NLSD 1123 (1389)
T ss_pred HHHHHhc----CCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-----CCceEEEEeCeeecCccccc--chhh
Confidence 5555555 689999998532 244556678999999999999876 68999999999999742100 0000
Q ss_pred -c-CCCCCCCCCCCCCCC---CCCCcHHHHHHHHh------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhh
Q 037566 132 -L-IGHDPPFKEDSLRLP---FPNFYYAVEDIAAS------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRH 200 (360)
Q Consensus 132 -~-~~~~~p~~E~~p~~p---~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~ 200 (360)
. .....++.|+.+..+ .+...|+++|+++| ...|++++|+||++|||++.....+....+.....-+..
T Consensus 1124 ~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~ 1203 (1389)
T TIGR03443 1124 ELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ 1203 (1389)
T ss_pred hhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH
Confidence 0 000112444433221 22456999999888 235899999999999999754222211111111100111
Q ss_pred cCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCC
Q 037566 201 QGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKF 278 (360)
Q Consensus 201 ~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~ 278 (360)
.+. ++ +.. ...|+++++|+|++++.++.++. ..+.+||++++..++|.++++.+.+. |.+.+ ..
T Consensus 1204 ~~~---~p-~~~---~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~------~~ 1269 (1389)
T TIGR03443 1204 LGL---IP-NIN---NTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVE------IV 1269 (1389)
T ss_pred hCC---cC-CCC---CccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCC------cc
Confidence 121 11 111 34789999999999998876543 23568999999999999999999764 65432 23
Q ss_pred CHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhcc-ccccccchhHHHH-cC-------CCcc---cccHHHH
Q 037566 279 DAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHL-QFQHVSSMNKSRE-FG-------FFGF---ADTMKSI 346 (360)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~d~~Kar~-lG-------~~p~---~~~~~~l 346 (360)
++..|...+.... ..... . .++..+..+ +.+. +.. .....+|++++++ +. .... --.++-|
T Consensus 1270 ~~~~w~~~l~~~~---~~~~~-~-~~~~~l~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 1342 (1389)
T TIGR03443 1270 DYVHWRKSLERFV---IERSE-D-NALFPLLHF-VLDD-LPQSTKAPELDDTNAATSLKADAAWTGVDVSSGAGVTEEQI 1342 (1389)
T ss_pred CHHHHHHHHHHhc---cccCc-c-chhhhHHHH-hhcc-CcccccCCCCCCHHHHHHHHhhcccccCCCcCCCCCCHHHH
Confidence 3444444321110 00000 0 001000000 0000 000 1145678888865 42 2222 1235678
Q ss_pred HHHHHHHHHCCCCC
Q 037566 347 RTWVKKLREMKIIP 360 (360)
Q Consensus 347 ~~~~~~~~~~g~ip 360 (360)
+.+++++++.|+||
T Consensus 1343 ~~~~~~~~~~~~l~ 1356 (1389)
T TIGR03443 1343 GIYIAYLVKVGFLP 1356 (1389)
T ss_pred HHHHHHHHHCCCCC
Confidence 89999999988875
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.3e-20 Score=168.30 Aligned_cols=214 Identities=15% Similarity=0.092 Sum_probs=144.3
Q ss_pred chHHHHHHHhcCCCCCCCC-cEEEEEecCCCCC------C---CCCCCce---eeEeeccCChHHHHHHHccCCCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGP-WKVYGTARRPPPS------W---FPSSHVD---HYITFDALDSTDTTQKLSSISQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~------~---~~~~~v~---~~v~gDl~d~~~l~~~l~~~~~~v~~V 68 (360)
||+.||++|++ .+ .+|+.++|+.... . ..+++++ ..+.||++|.+.+.++++..+ ||.|
T Consensus 10 IGseL~rql~~------~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~--pdiV 81 (293)
T PF02719_consen 10 IGSELVRQLLR------YGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYK--PDIV 81 (293)
T ss_dssp HHHHHHHHHHC------CB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T---SEE
T ss_pred HHHHHHHHHHh------cCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcC--CCEE
Confidence 79999999998 44 4799999975331 1 1233454 035899999999999999665 8999
Q ss_pred EEeeeec-----CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 69 FWVMFQR-----LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 69 ~h~A~~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
||+|+.. ..++.+..++||.||+|++++|.++ ++++||++||-++.
T Consensus 82 fHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-----~v~~~v~ISTDKAv------------------------ 132 (293)
T PF02719_consen 82 FHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-----GVERFVFISTDKAV------------------------ 132 (293)
T ss_dssp EE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-----T-SEEEEEEECGCS------------------------
T ss_pred EEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEccccccC------------------------
Confidence 9999853 2378899999999999999999997 89999999986532
Q ss_pred CCCCCCCCcHHHHHHHHh-------c---CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS-------Y---SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e-------~---~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
.|.+.||.+|.++| . ..+..++++|.+||.|-+ ++..+ ++.. .+ ..|.|+.+....
T Consensus 133 ----~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-GSVip----~F~~-Qi--~~g~PlTvT~p~-- 198 (293)
T PF02719_consen 133 ----NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-GSVIP----LFKK-QI--KNGGPLTVTDPD-- 198 (293)
T ss_dssp ----S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-TSCHH----HHHH-HH--HTTSSEEECETT--
T ss_pred ----CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-CcHHH----HHHH-HH--HcCCcceeCCCC--
Confidence 24677999999999 1 135789999999999953 23222 2221 12 246787764322
Q ss_pred ccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCc
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEF 269 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~ 269 (360)
..+-+...++.++.++.|+.. ...|++|..--|+++++.|+++.+.+..|...
T Consensus 199 --mtRffmti~EAv~Lvl~a~~~-~~~geifvl~mg~~v~I~dlA~~~i~~~g~~~ 251 (293)
T PF02719_consen 199 --MTRFFMTIEEAVQLVLQAAAL-AKGGEIFVLDMGEPVKILDLAEAMIELSGLEP 251 (293)
T ss_dssp ---EEEEE-HHHHHHHHHHHHHH---TTEEEEE---TCEECCCHHHHHHHHTT-EE
T ss_pred --cEEEEecHHHHHHHHHHHHhh-CCCCcEEEecCCCCcCHHHHHHHHHhhccccc
Confidence 345677788888888887753 24589999888999999999999999999754
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=161.12 Aligned_cols=206 Identities=15% Similarity=0.137 Sum_probs=144.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCC--C-ccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQ--E-VTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~--~-v~~V~h~A~~~~~ 77 (360)
.||++++++|++ +|++|++++|++.... ..+++ .+.+|++|++++.+++++.+. + +|.|||++....
T Consensus 10 ~iG~~vv~~L~~------~g~~V~~~~R~~~~~~--~~~~~-~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~- 79 (285)
T TIGR03649 10 KTASRIARLLQA------ASVPFLVASRSSSSSA--GPNEK-HVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP- 79 (285)
T ss_pred hHHHHHHHHHHh------CCCcEEEEeCCCcccc--CCCCc-cccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC-
Confidence 489999999998 8999999999876432 35788 899999999999999943210 2 578999875321
Q ss_pred ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHH
Q 037566 78 SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVED 157 (360)
Q Consensus 78 ~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek 157 (360)
+ ....+.+++++|+++ |++|||++||..++. . .+ .. ...++
T Consensus 80 ~-------~~~~~~~~i~aa~~~-----gv~~~V~~Ss~~~~~---------------~------~~----~~--~~~~~ 120 (285)
T TIGR03649 80 D-------LAPPMIKFIDFARSK-----GVRRFVLLSASIIEK---------------G------GP----AM--GQVHA 120 (285)
T ss_pred C-------hhHHHHHHHHHHHHc-----CCCEEEEeeccccCC---------------C------Cc----hH--HHHHH
Confidence 1 124567999999987 899999998854321 0 00 00 11234
Q ss_pred HHHhcCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC
Q 037566 158 IAASYSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 158 ~l~e~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~ 237 (360)
++.+ ..+++++++||+.+|+....... ...+ +..+ ++. .+.+. ...++++++|+|+++..++.++
T Consensus 121 ~l~~-~~gi~~tilRp~~f~~~~~~~~~--------~~~~-~~~~-~~~-~~~g~---~~~~~v~~~Dva~~~~~~l~~~ 185 (285)
T TIGR03649 121 HLDS-LGGVEYTVLRPTWFMENFSEEFH--------VEAI-RKEN-KIY-SATGD---GKIPFVSADDIARVAYRALTDK 185 (285)
T ss_pred HHHh-ccCCCEEEEeccHHhhhhccccc--------cccc-ccCC-eEE-ecCCC---CccCcccHHHHHHHHHHHhcCC
Confidence 4432 24899999999988863211100 0011 1122 222 23333 4468999999999999888776
Q ss_pred CCCCCceeccCCCcccHHHHHHHHHHHhCCCcc
Q 037566 238 RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 238 ~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~ 270 (360)
...|+.||+++++.+|++|+++.+++.+|.+..
T Consensus 186 ~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~ 218 (285)
T TIGR03649 186 VAPNTDYVVLGPELLTYDDVAEILSRVLGRKIT 218 (285)
T ss_pred CcCCCeEEeeCCccCCHHHHHHHHHHHhCCceE
Confidence 666889999999999999999999999998765
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.3e-18 Score=148.68 Aligned_cols=291 Identities=14% Similarity=0.085 Sum_probs=193.7
Q ss_pred hHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C----C---CCCCceeeEeeccCChHHHHHHHccCCCCccEEE
Q 037566 3 GLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W----F---PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLF 69 (360)
Q Consensus 3 G~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~----~---~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~ 69 (360)
||.|++.||. +|++|+++.|+.++. . + ...... ...||++|...|.+.+.-+. ++-|+
T Consensus 41 GSYLaEfLL~------KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mk-LHYgDmTDss~L~k~I~~ik--PtEiY 111 (376)
T KOG1372|consen 41 GSYLAEFLLS------KGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMK-LHYGDMTDSSCLIKLISTIK--PTEVY 111 (376)
T ss_pred chHHHHHHHh------CCceeeEEEeeccccchhhhhhhhcCchhcccceeE-EeeccccchHHHHHHHhccC--chhhh
Confidence 8999999999 999999999987652 0 1 123467 78999999999999999886 79999
Q ss_pred EeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 70 WVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 70 h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
|+|+++. +-++...+|...||.+||+|.+.+.- ..+ .||--+||+..||.. ...|-+|+.|
T Consensus 112 nLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l-~~~-VrfYQAstSElyGkv------------~e~PQsE~TP 177 (376)
T KOG1372|consen 112 NLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRL-TEK-VRFYQASTSELYGKV------------QEIPQSETTP 177 (376)
T ss_pred hhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCc-ccc-eeEEecccHhhcccc------------cCCCcccCCC
Confidence 9998543 23555678999999999999886410 112 367778999999953 3678899999
Q ss_pred CCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCC-CcchhHHHHHHHHHHHhh-cC-CCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICRH-QG-LPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~-~~~~~~~~~~~~~~~~~~-~~-~~~~~~G~~~~~ 214 (360)
..| .++|+..|+.+- +.++|-.|---.+|.=.|+.+ ++... .+-.++.|. .| ..-...|+..
T Consensus 178 FyP--RSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTR----KItRsvakI~~gqqe~~~LGNL~-- 249 (376)
T KOG1372|consen 178 FYP--RSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTR----KITRSVAKISLGQQEKIELGNLS-- 249 (376)
T ss_pred CCC--CChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhH----HHHHHHHHhhhcceeeEEecchh--
Confidence 875 777999998764 234444443334555566554 33222 222222221 22 2334568875
Q ss_pred cccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHH
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEI 294 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (360)
..+|+-++.|-++|+.+.+.+. ..+-|.|+.|+..|++|+++..-..+|....-- +..... ..
T Consensus 250 -a~RDWGhA~dYVEAMW~mLQ~d--~PdDfViATge~hsVrEF~~~aF~~ig~~l~We--g~gv~~---~~--------- 312 (376)
T KOG1372|consen 250 -ALRDWGHAGDYVEAMWLMLQQD--SPDDFVIATGEQHSVREFCNLAFAEIGEVLNWE--GEGVDE---VG--------- 312 (376)
T ss_pred -hhcccchhHHHHHHHHHHHhcC--CCCceEEecCCcccHHHHHHHHHHhhCcEEeec--cccccc---cc---------
Confidence 7899999999999987666543 236699999999999999999888888433210 000000 00
Q ss_pred HHHhCCC----ccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHH
Q 037566 295 VEKHGLY----KTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVK 351 (360)
Q Consensus 295 ~~~~~l~----~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~ 351 (360)
....|.. .++.-+-. -.| .+.-|.+||++ |||+|++++.|-.++.++
T Consensus 313 ~n~~g~v~V~v~~kYyRPt---EVd-------~LqGdasKAk~~LgW~pkv~f~eLVkeMv~ 364 (376)
T KOG1372|consen 313 KNDDGVVRVKVDPKYYRPT---EVD-------TLQGDASKAKKTLGWKPKVTFPELVKEMVA 364 (376)
T ss_pred ccCCceEEEEecccccCcc---hhh-------hhcCChHHHHHhhCCCCccCHHHHHHHHHH
Confidence 0000100 01100000 112 24679999976 899999999887776553
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-18 Score=165.13 Aligned_cols=211 Identities=14% Similarity=0.109 Sum_probs=162.1
Q ss_pred chHHHHHHHhcCCCCCCCC-cEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGP-WKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
|||.|++++++ .+ -+++.++|+..+. .....++. ++-||++|.+.+.+++++.+ ||.|||+
T Consensus 262 iGsel~~qil~------~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~-~~igdVrD~~~~~~~~~~~k--vd~VfHA 332 (588)
T COG1086 262 IGSELCRQILK------FNPKEIILFSRDEYKLYLIDMELREKFPELKLR-FYIGDVRDRDRVERAMEGHK--VDIVFHA 332 (588)
T ss_pred HHHHHHHHHHh------cCCCEEEEecCchHHHHHHHHHHHhhCCCcceE-EEecccccHHHHHHHHhcCC--CceEEEh
Confidence 79999999998 44 3599999876431 11246778 89999999999999999986 7999999
Q ss_pred eeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 72 MFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 72 A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
|+... .+|.+..++||.||+|+++||.++ +|++||++||-++-
T Consensus 333 AA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-----~V~~~V~iSTDKAV--------------------------- 380 (588)
T COG1086 333 AALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-----GVKKFVLISTDKAV--------------------------- 380 (588)
T ss_pred hhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-----CCCEEEEEecCccc---------------------------
Confidence 98432 278899999999999999999997 89999999975421
Q ss_pred CCCCCcHHHHHHHHh-------c-CC--CCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 147 PFPNFYYAVEDIAAS-------Y-SP--AVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-------~-~~--~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
.|.+-||.+|.++| . .. +-..+++|.+||.|.+ ++..+ +|....+ .|.|+++-. .. .
T Consensus 381 -~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-GSViP------lFk~QI~-~GgplTvTd-p~---m 447 (588)
T COG1086 381 -NPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-GSVIP------LFKKQIA-EGGPLTVTD-PD---M 447 (588)
T ss_pred -CCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-CCCHH------HHHHHHH-cCCCccccC-CC---c
Confidence 24666999999998 1 22 4789999999999964 23222 2322222 466766532 22 4
Q ss_pred cccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCC
Q 037566 217 FCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDV 267 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~ 267 (360)
.+-|....+.++..+.|... ...||+|-.--|+++++.|+++.+-+.+|.
T Consensus 448 tRyfMTI~EAv~LVlqA~a~-~~gGeifvldMGepvkI~dLAk~mi~l~g~ 497 (588)
T COG1086 448 TRFFMTIPEAVQLVLQAGAI-AKGGEIFVLDMGEPVKIIDLAKAMIELAGQ 497 (588)
T ss_pred eeEEEEHHHHHHHHHHHHhh-cCCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence 45667788888888887654 356899988889999999999999999994
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.5e-19 Score=161.54 Aligned_cols=200 Identities=15% Similarity=0.119 Sum_probs=106.4
Q ss_pred CchHHHHHHHhcCCCCCCCCc--EEEEEecCCCCC------------C-C-------CCCCceeeEeeccCChH------
Q 037566 1 MAGLSLAEALKNNPTIPGGPW--KVYGTARRPPPS------------W-F-------PSSHVDHYITFDALDST------ 52 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~--~V~~l~r~~~~~------------~-~-------~~~~v~~~v~gDl~d~~------ 52 (360)
|+|+||+++|++ ++. +|+++.|..... . + ...+++ ++.|||+++.
T Consensus 7 flG~~ll~~Ll~------~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~-~v~GDl~~~~lGL~~~ 79 (249)
T PF07993_consen 7 FLGSHLLEELLR------QPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIE-VVEGDLSQPNLGLSDE 79 (249)
T ss_dssp HHHHHHHHHHHH------HS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEE-EEE--TTSGGGG--HH
T ss_pred HHHHHHHHHHHc------CCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEE-EEeccccccccCCChH
Confidence 689999999998 554 899999975320 0 0 157899 9999999863
Q ss_pred HHHHHHccCCCCccEEEEeeeec--CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccC
Q 037566 53 DTTQKLSSISQEVTHLFWVMFQR--LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVG 130 (360)
Q Consensus 53 ~l~~~l~~~~~~v~~V~h~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g 130 (360)
++.++.+. +|+|||+|+.. ..+.+++.++||.||++|++.|.+. +.++|+|+||+.+.+... +
T Consensus 80 ~~~~L~~~----v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-----~~~~~~~iSTa~v~~~~~------~ 144 (249)
T PF07993_consen 80 DYQELAEE----VDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-----KRKRFHYISTAYVAGSRP------G 144 (249)
T ss_dssp HHHHHHHH------EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-----S---EEEEEEGGGTTS-T------T
T ss_pred Hhhccccc----cceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-----cCcceEEeccccccCCCC------C
Confidence 34555455 68999999842 2356678899999999999999864 456999999955554321 1
Q ss_pred CcCCCCCC--CCCCCCC-CCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeec-CCC--CcchhHHHHHHHHHH
Q 037566 131 QLIGHDPP--FKEDSLR-LPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGA-SSR--SLNNSLLTLAVYATI 197 (360)
Q Consensus 131 ~~~~~~~p--~~E~~p~-~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp-~~~--~~~~~~~~~~~~~~~ 197 (360)
.. ...+ ..|.... .......|.++|+++| ...|++++|+||+.|+|. ..+ +...... ..+...+
T Consensus 145 ~~--~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~-~~~~~~~ 221 (249)
T PF07993_consen 145 TI--EEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFP-YLLRSCI 221 (249)
T ss_dssp T----SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHH-HHHHHHH
T ss_pred cc--cccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHH-HHHHHHH
Confidence 00 0000 1121111 1122346999999999 224899999999999993 222 2222111 1111112
Q ss_pred HhhcCCCeeeeCCcccccccccccCHHHHHHHH
Q 037566 198 CRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQ 230 (360)
Q Consensus 198 ~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~ 230 (360)
. .+.....+++.. ...|++.||.+|+++
T Consensus 222 ~--~~~~p~~~~~~~---~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 222 A--LGAFPDLPGDPD---ARLDLVPVDYVARAI 249 (249)
T ss_dssp H--H-EEES-SB------TT--EEEHHHHHHHH
T ss_pred H--cCCcccccCCCC---ceEeEECHHHHHhhC
Confidence 1 233222344433 347999999999875
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-17 Score=151.51 Aligned_cols=211 Identities=9% Similarity=0.026 Sum_probs=142.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeeccCCh-HHHHHHH-ccCCCCccEEEEeeeec
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFPSSHVDHYITFDALDS-TDTTQKL-SSISQEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~-~~l~~~l-~~~~~~v~~V~h~A~~~ 75 (360)
+||++|+++|++ +||+|+++.|++... .....+++ ++.+|++|. +++.+++ .+ +|+|||+++..
T Consensus 28 ~iG~~l~~~L~~------~g~~V~~~~R~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~l~~~~~~~----~d~vi~~~g~~ 96 (251)
T PLN00141 28 RTGKRIVEQLLA------KGFAVKAGVRDVDKAKTSLPQDPSLQ-IVRADVTEGSDKLVEAIGDD----SDAVICATGFR 96 (251)
T ss_pred HHHHHHHHHHHh------CCCEEEEEecCHHHHHHhcccCCceE-EEEeeCCCCHHHHHHHhhcC----CCEEEECCCCC
Confidence 489999999998 899999999975431 11234689 999999984 6677777 45 58999988753
Q ss_pred C-CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHH
Q 037566 76 L-KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYA 154 (360)
Q Consensus 76 ~-~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~ 154 (360)
. .++...+++|..|+.++++++.+. +++|||++||..+||.. ...+..+..... .+...|.
T Consensus 97 ~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~~~iV~iSS~~v~g~~------------~~~~~~~~~~~~-~~~~~~~ 158 (251)
T PLN00141 97 RSFDPFAPWKVDNFGTVNLVEACRKA-----GVTRFILVSSILVNGAA------------MGQILNPAYIFL-NLFGLTL 158 (251)
T ss_pred cCCCCCCceeeehHHHHHHHHHHHHc-----CCCEEEEEccccccCCC------------cccccCcchhHH-HHHHHHH
Confidence 2 233345688999999999999876 78999999999999742 111222211100 1111233
Q ss_pred HHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHH
Q 037566 155 VEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQI 231 (360)
Q Consensus 155 ~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~ 231 (360)
.+|...| +..+++++++||+.+++..... .....+++. .....++.+|+|+++.
T Consensus 159 ~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~-------------------~~~~~~~~~----~~~~~i~~~dvA~~~~ 215 (251)
T PLN00141 159 VAKLQAEKYIRKSGINYTIVRPGGLTNDPPTG-------------------NIVMEPEDT----LYEGSISRDQVAEVAV 215 (251)
T ss_pred HHHHHHHHHHHhcCCcEEEEECCCccCCCCCc-------------------eEEECCCCc----cccCcccHHHHHHHHH
Confidence 4555555 4568999999999999853211 000111111 0123578999999999
Q ss_pred HHHcCCCCCCCceeccCC---CcccHHHHHHHHHH
Q 037566 232 WAATTDRAKNQAFNCTNG---DVFTWKSLWKLLSE 263 (360)
Q Consensus 232 ~a~~~~~~~g~~yni~~g---~~~s~~el~~~ia~ 263 (360)
.++..+...+.++.+.++ ...+++++...+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 216 EALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred HHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 998877666788888763 24789998887764
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.5e-16 Score=141.87 Aligned_cols=217 Identities=11% Similarity=0.038 Sum_probs=142.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h~A 72 (360)
+||++|+++|++ +|++|++++|++... .....+++ ++.+|++|.+++.+++++ .. ++|+|||+|
T Consensus 13 ~IG~~la~~L~~------~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~a 84 (276)
T PRK06482 13 GFGRGMTERLLA------RGDRVAATVRRPDALDDLKARYGDRLW-VLQLDVTDSAAVRAVVDRAFAALG-RIDVVVSNA 84 (276)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHhccCceE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 489999999999 899999999875321 01124688 999999999988777653 22 279999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +.+..+++|+.|+.++++++...++ ..+.++||++||...+. . .
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~---------------~------~ 142 (276)
T PRK06482 85 GYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLR-RQGGGRIVQVSSEGGQI---------------A------Y 142 (276)
T ss_pred CCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcCccccc---------------C------C
Confidence 85321 2245678999999999999843221 12567999998853221 0 0
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCe---eecCCCCc--chh--HHHHHHHHHHHhhcCCCee
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSII---IGASSRSL--NNS--LLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~v---yGp~~~~~--~~~--~~~~~~~~~~~~~~~~~~~ 206 (360)
| +.+.|+.+|...+ ...+++++++||+.+ ||++.... ... ..+...+.... ...++
T Consensus 143 ---~-~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~- 215 (276)
T PRK06482 143 ---P-GFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRAL--ADGSF- 215 (276)
T ss_pred ---C-CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHH--hhccC-
Confidence 1 2345888776544 236899999999988 77653211 000 00011110000 01111
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhC
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFD 266 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g 266 (360)
. -..+++|++++++.++..+ ..+..||+++++..+.+|++..+.+.++
T Consensus 216 ---------~--~~~d~~~~~~a~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 216 ---------A--IPGDPQKMVQAMIASADQT-PAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred ---------C--CCCCHHHHHHHHHHHHcCC-CCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 1 1346889999999988654 3457799999999988888877766654
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-16 Score=137.57 Aligned_cols=171 Identities=19% Similarity=0.178 Sum_probs=122.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCChh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSEE 80 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~~ 80 (360)
++|+.|+++|++ +|++|++++|++.+... ..+++ ++.+|+.|++++.++++++ |+|||+++....
T Consensus 9 ~vG~~l~~~L~~------~~~~V~~~~R~~~~~~~-~~~~~-~~~~d~~d~~~~~~al~~~----d~vi~~~~~~~~--- 73 (183)
T PF13460_consen 9 FVGRALAKQLLR------RGHEVTALVRSPSKAED-SPGVE-IIQGDLFDPDSVKAALKGA----DAVIHAAGPPPK--- 73 (183)
T ss_dssp HHHHHHHHHHHH------TTSEEEEEESSGGGHHH-CTTEE-EEESCTTCHHHHHHHHTTS----SEEEECCHSTTT---
T ss_pred hHHHHHHHHHHH------CCCEEEEEecCchhccc-ccccc-cceeeehhhhhhhhhhhhc----chhhhhhhhhcc---
Confidence 379999999999 89999999999764221 57899 9999999999999999985 799999864322
Q ss_pred HhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 037566 81 INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAA 160 (360)
Q Consensus 81 ~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~ 160 (360)
....+++++++|+++ +++|||++||.++|+... .....+..+ .+. .|..++...
T Consensus 74 -----~~~~~~~~~~a~~~~-----~~~~~v~~s~~~~~~~~~------------~~~~~~~~~---~~~-~~~~~~~~~ 127 (183)
T PF13460_consen 74 -----DVDAAKNIIEAAKKA-----GVKRVVYLSSAGVYRDPP------------GLFSDEDKP---IFP-EYARDKREA 127 (183)
T ss_dssp -----HHHHHHHHHHHHHHT-----TSSEEEEEEETTGTTTCT------------SEEEGGTCG---GGH-HHHHHHHHH
T ss_pred -----ccccccccccccccc-----ccccceeeeccccCCCCC------------ccccccccc---chh-hhHHHHHHH
Confidence 288889999999987 799999999999887421 100111111 112 244455444
Q ss_pred h---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHc
Q 037566 161 S---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAAT 235 (360)
Q Consensus 161 e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~ 235 (360)
| +..+++|+++||+.+||+... .... ...+.. .....++.+|+|++++.+++
T Consensus 128 e~~~~~~~~~~~ivrp~~~~~~~~~-~~~~------------------~~~~~~----~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 128 EEALRESGLNWTIVRPGWIYGNPSR-SYRL------------------IKEGGP----QGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp HHHHHHSTSEEEEEEESEEEBTTSS-SEEE------------------ESSTST----TSHCEEEHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEECcEeEeCCCc-ceeE------------------EeccCC----CCcCcCCHHHHHHHHHHHhC
Confidence 4 445999999999999998632 1110 000111 23478899999999988774
|
... |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-15 Score=142.16 Aligned_cols=158 Identities=13% Similarity=0.061 Sum_probs=114.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------------C--CCCCCceeeEeeccCChH------HHHHH
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------------W--FPSSHVDHYITFDALDST------DTTQK 57 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------------~--~~~~~v~~~v~gDl~d~~------~l~~~ 57 (360)
|+|++|+++|+. + ...+|+|++|..+.. | ...++++ .+.||+..+. .++++
T Consensus 11 FLG~yLl~eLL~----~-~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~-vv~gDl~e~~lGL~~~~~~~L 84 (382)
T COG3320 11 FLGAYLLLELLD----R-SDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVE-VVAGDLAEPDLGLSERTWQEL 84 (382)
T ss_pred HhHHHHHHHHHh----c-CCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEE-EEecccccccCCCCHHHHHHH
Confidence 689999999998 1 235899999976521 1 2357899 9999998653 45555
Q ss_pred HccCCCCccEEEEeeeec--CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCC
Q 037566 58 LSSISQEVTHLFWVMFQR--LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 58 l~~~~~~v~~V~h~A~~~--~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
.+. ||+|||.|+.. ..+.++....||.||..+++-|... ++|.|.|+||++|+..... + + .
T Consensus 85 a~~----vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-----k~Kp~~yVSsisv~~~~~~---~-~----~ 147 (382)
T COG3320 85 AEN----VDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-----KPKPLHYVSSISVGETEYY---S-N----F 147 (382)
T ss_pred hhh----cceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-----CCceeEEEeeeeecccccc---C-C----C
Confidence 444 78999999842 3467789999999999999998874 6899999999999864211 0 0 0
Q ss_pred CCCCCCCCCCC-C--CCCCcHHHHHHHHh------cCCCCcEEEEcCCCeeecCC
Q 037566 136 DPPFKEDSLRL-P--FPNFYYAVEDIAAS------YSPAVTYSVHRSSIIIGASS 181 (360)
Q Consensus 136 ~~p~~E~~p~~-p--~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp~~ 181 (360)
..-.+|.++.. . .+.+.|+++|+.+| ...|++++|+||+.|.|...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~ 202 (382)
T COG3320 148 TVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR 202 (382)
T ss_pred ccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc
Confidence 11122333322 1 23456888888888 23499999999999999865
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=9e-15 Score=132.43 Aligned_cols=200 Identities=11% Similarity=0.061 Sum_probs=129.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
+||++++++|++ +|++|++++|+.... ......+. ++.+|++|.+++.++++.+ . .+|+
T Consensus 17 ~iG~~l~~~l~~------~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~~d~ 88 (249)
T PRK09135 17 RIGAAIARTLHA------AGYRVAIHYHRSAAEADALAAELNALRPGSAA-ALQADLLDPDALPELVAACVAAFG-RLDA 88 (249)
T ss_pred hHHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHhhcCCceE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCE
Confidence 489999999999 899999999864221 00123577 8999999999988887753 2 2799
Q ss_pred EEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 68 LFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 68 V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|||+|+.... +.+.++++|+.|+.++++++...+. ..-.+++..||. +
T Consensus 89 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~--~~~~~~~~~~~~--~------------------- 145 (249)
T PRK09135 89 LVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLR--KQRGAIVNITDI--H------------------- 145 (249)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHh--hCCeEEEEEeCh--h-------------------
Confidence 9999984221 2356789999999999999975311 011345544331 1
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
|..|. .|...|+.+|...+ ...++.++++||+.++||.+...++... ....+ .+.++..
T Consensus 146 --~~~~~--~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~---~~~~~---~~~~~~~-- 213 (249)
T PRK09135 146 --AERPL--KGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEA---RQAIL---ARTPLKR-- 213 (249)
T ss_pred --hcCCC--CCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHH---HHHHH---hcCCcCC--
Confidence 11221 13455888887655 2246999999999999997643222111 11111 1222111
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC-CCCCCceeccCCCccc
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD-RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~-~~~g~~yni~~g~~~s 253 (360)
..+++|+|+++.+++... ...|++|||++|..++
T Consensus 214 ----------~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 214 ----------IGTPEDIAEAVRFLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred ----------CcCHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence 124789999986666443 3468999999998764
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.7e-14 Score=142.82 Aligned_cols=207 Identities=11% Similarity=0.051 Sum_probs=137.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C-----------CCCCceeeEeeccCChHHHHHHHccCCCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F-----------PSSHVDHYITFDALDSTDTTQKLSSISQE 64 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~-----------~~~~v~~~v~gDl~d~~~l~~~l~~~~~~ 64 (360)
+||++|+++|++ +|++|++++|+..... . ...+++ ++.+|++|.+++.+++.+
T Consensus 91 gIG~aLAr~LLk------~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~-iV~gDLtD~esI~~aLgg---- 159 (576)
T PLN03209 91 KVGSRTVRELLK------LGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLE-IVECDLEKPDQIGPALGN---- 159 (576)
T ss_pred HHHHHHHHHHHH------CCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceE-EEEecCCCHHHHHHHhcC----
Confidence 489999999999 8999999999753210 0 013588 999999999999999887
Q ss_pred ccEEEEeeeecCC---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 65 VTHLFWVMFQRLK---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 65 v~~V~h~A~~~~~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+|||+|+.... +....+++|+.|+.|++++|.+. +++|||++||.+++.. + . .+
T Consensus 160 iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-----gVgRIV~VSSiga~~~--------g------~--p~ 218 (576)
T PLN03209 160 ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-----KVNHFILVTSLGTNKV--------G------F--PA 218 (576)
T ss_pred CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-----CCCEEEEEccchhccc--------C------c--cc
Confidence 4789999875322 34566889999999999999886 7899999999754311 0 0 01
Q ss_pred CCCCCCCCCCcHHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
. ... ....|...|..+| ...|++|++|||+.++++.+...... +. ....++ . ...
T Consensus 219 ~-~~~--sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~--------------~v-~~~~~d-~---~~g 276 (576)
T PLN03209 219 A-ILN--LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETH--------------NL-TLSEED-T---LFG 276 (576)
T ss_pred c-chh--hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCcccccccc--------------ce-eecccc-c---cCC
Confidence 0 011 1222333344333 45799999999999998754321000 00 000011 0 011
Q ss_pred cccCHHHHHHHHHHHHcCCC-CCCCceeccCCCc---ccHHHHHHHH
Q 037566 219 DMSDSRVLAEQQIWAATTDR-AKNQAFNCTNGDV---FTWKSLWKLL 261 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~~-~~g~~yni~~g~~---~s~~el~~~i 261 (360)
-.+.-.|+|++++.++.++. ..+.+|.+.++.. .++.+++..|
T Consensus 277 r~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 277 GQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKI 323 (576)
T ss_pred CccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhc
Confidence 23567789999998887554 4489999998763 4566666544
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-14 Score=134.16 Aligned_cols=222 Identities=12% Similarity=0.010 Sum_probs=142.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
.||++++++|++ +|++|++++|++... ......+. ++.+|++|++++.++++++ . ++|+|+|+|
T Consensus 14 ~iG~~~a~~l~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~a 85 (275)
T PRK08263 14 GFGRAWTEAALE------RGDRVVATARDTATLADLAEKYGDRLL-PLALDVTDRAAVFAAVETAVEHFG-RLDIVVNNA 85 (275)
T ss_pred hHHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHhccCCee-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 479999999998 899999999875431 01134577 8899999999887776643 2 279999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +.+..+++|+.++.++++++...++ ..+.++||++||...+...
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~vsS~~~~~~~--------------------- 143 (275)
T PRK08263 86 GYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLR-EQRSGHIIQISSIGGISAF--------------------- 143 (275)
T ss_pred CCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEEcChhhcCCC---------------------
Confidence 85321 3456789999999999988753221 1146799999987654310
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
+ ....|+.+|...+ ...|++++++||+.+..+..+...........+..+.... +...
T Consensus 144 ---~-~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~- 211 (275)
T PRK08263 144 ---P-MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREEL-------AEQW- 211 (275)
T ss_pred ---C-CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHH-------HHHH-
Confidence 0 1234777776543 2468999999999887653211000000000011110000 0000
Q ss_pred ccccccc-cCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhC
Q 037566 214 WEHFCDM-SDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFD 266 (360)
Q Consensus 214 ~~~~~d~-~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g 266 (360)
....+ ++.+|+|++++.++..+...++.|+.+.+..+++.++.+.+.++.+
T Consensus 212 --~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 212 --SERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred --HhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence 11234 7899999999998876655566554445568899999888877643
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-13 Score=123.26 Aligned_cols=214 Identities=12% Similarity=0.084 Sum_probs=155.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--C--C--CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--W--F--PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~--~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
|+|+.+|.+|.. .|-+|++--|..... . . +-..+- +..-|++|+++++++++.. .+|+++-+.
T Consensus 72 FlGryvvnklak------~GSQviiPyR~d~~~~r~lkvmGdLGQvl-~~~fd~~DedSIr~vvk~s----NVVINLIGr 140 (391)
T KOG2865|consen 72 FLGRYVVNKLAK------MGSQVIIPYRGDEYDPRHLKVMGDLGQVL-FMKFDLRDEDSIRAVVKHS----NVVINLIGR 140 (391)
T ss_pred cccHHHHHHHhh------cCCeEEEeccCCccchhheeeccccccee-eeccCCCCHHHHHHHHHhC----cEEEEeecc
Confidence 689999999998 899999888864321 1 1 123566 8999999999999999985 578999775
Q ss_pred cCC-ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcH
Q 037566 75 RLK-SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYY 153 (360)
Q Consensus 75 ~~~-~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y 153 (360)
..+ ..-.+.++|+.+.+.+..-|+++ ||+|||++|+..+ + +. + .+.|
T Consensus 141 d~eTknf~f~Dvn~~~aerlAricke~-----GVerfIhvS~Lga----------------n---v~-------s-~Sr~ 188 (391)
T KOG2865|consen 141 DYETKNFSFEDVNVHIAERLARICKEA-----GVERFIHVSCLGA----------------N---VK-------S-PSRM 188 (391)
T ss_pred ccccCCcccccccchHHHHHHHHHHhh-----Chhheeehhhccc----------------c---cc-------C-hHHH
Confidence 333 22357799999999999999987 8999999986421 0 11 1 1224
Q ss_pred HHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHH
Q 037566 154 AVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQ 230 (360)
Q Consensus 154 ~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~ 230 (360)
-.+|.++| +..=-..+|+||+.+||.-|+ +.+ -|..+.|..+ +++..+.+. ..+-..+++-|+|.++
T Consensus 189 LrsK~~gE~aVrdafPeAtIirPa~iyG~eDr-fln------~ya~~~rk~~-~~pL~~~Ge--kT~K~PVyV~DVaa~I 258 (391)
T KOG2865|consen 189 LRSKAAGEEAVRDAFPEATIIRPADIYGTEDR-FLN------YYASFWRKFG-FLPLIGKGE--KTVKQPVYVVDVAAAI 258 (391)
T ss_pred HHhhhhhHHHHHhhCCcceeechhhhcccchh-HHH------HHHHHHHhcC-ceeeecCCc--ceeeccEEEehHHHHH
Confidence 44555555 222235799999999997653 222 2334444333 344444432 1445678888999999
Q ss_pred HHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCC
Q 037566 231 IWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDV 267 (360)
Q Consensus 231 ~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~ 267 (360)
+.|+.+|.+.|.+|...+++.+.+.||++.+-+..-.
T Consensus 259 vnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~ 295 (391)
T KOG2865|consen 259 VNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMARE 295 (391)
T ss_pred HHhccCccccCceeeecCCchhhHHHHHHHHHHHHhh
Confidence 9999999888999999999999999999999888765
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.5e-14 Score=126.50 Aligned_cols=199 Identities=12% Similarity=0.010 Sum_probs=133.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++|+++|++ +|++|+++.|+.... .....++. ++.+|++|++++.++++++ . ++|.|
T Consensus 17 ~iG~~l~~~l~~------~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~-~id~v 88 (249)
T PRK12825 17 GLGRAIALRLAR------AGADVVVHYRSDEEAAEELVEAVEALGRRAQ-AVQADVTDKAALEAAVAAAVERFG-RIDIL 88 (249)
T ss_pred hHHHHHHHHHHH------CCCeEEEEeCCCHHHHHHHHHHHHhcCCceE-EEECCcCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 379999999999 899998877764321 01234688 9999999999988887653 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|+.... +.+..+++|+.++.++++++.+.++ ..++++||++||...|...
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~i~~SS~~~~~~~----------------- 150 (249)
T PRK12825 89 VNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMR-KQRGGRIVNISSVAGLPGW----------------- 150 (249)
T ss_pred EECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEECccccCCCC-----------------
Confidence 999984322 2345789999999999999853211 1257899999987655310
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ +...|+.+|...+ ...+++++++||+.++|+........ . . .. .....
T Consensus 151 -------~-~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~---~-~---~~--~~~~~---- 209 (249)
T PRK12825 151 -------P-GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEE---A-R---EA--KDAET---- 209 (249)
T ss_pred -------C-CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccch---h-H---Hh--hhccC----
Confidence 0 1233666654332 23689999999999999864322110 0 0 00 00011
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 252 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~ 252 (360)
....+++.+|+++++.+++..+. ..|++|+|++|..+
T Consensus 210 ------~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 210 ------PLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred ------CCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence 11236788999999998886542 35899999988654
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.8e-14 Score=129.49 Aligned_cols=204 Identities=10% Similarity=-0.019 Sum_probs=127.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccCC---CCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h 70 (360)
.||++++++|++ +|++|++++|++.... .....+. ++.+|++|.+++.++++++. .++|+|+|
T Consensus 18 ~iG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~ 90 (262)
T PRK13394 18 GIGKEIALELAR------AGAAVAIADLNQDGANAVADEINKAGGKAI-GVAMDVTNEDAVNAGIDKVAERFGSVDILVS 90 (262)
T ss_pred hHHHHHHHHHHH------CCCeEEEEeCChHHHHHHHHHHHhcCceEE-EEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 389999999999 9999999998763210 0123567 89999999998887776421 12799999
Q ss_pred eeeecCC---------ChhHhhhhhHHH----HHHHHHHH-HhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTM----FKNVMSVV-VDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~g----t~nll~a~-~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
+|+.... ..+..+++|+.+ ++++++++ ++. +.++||++||...+..
T Consensus 91 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~~~~iv~~ss~~~~~~--------------- 150 (262)
T PRK13394 91 NAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-----RGGVVIYMGSVHSHEA--------------- 150 (262)
T ss_pred CCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-----CCcEEEEEcchhhcCC---------------
Confidence 9985321 234567899999 66666666 332 5789999988533210
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhH-HHH--HHHHHHHhhcCC
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSL-LTL--AVYATICRHQGL 203 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~-~~~--~~~~~~~~~~~~ 203 (360)
.+ +...|+.+|...+ ...++.++++||+.++||.....+... ... .....+.
T Consensus 151 ~~----------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~----- 215 (262)
T PRK13394 151 SP----------LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVK----- 215 (262)
T ss_pred CC----------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHH-----
Confidence 00 1223554444322 236899999999999998542211100 000 0000000
Q ss_pred CeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 204 PFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 204 ~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
.+.+.+. ...++++++|+++++++++..+. ..|+.|++.+|..
T Consensus 216 --~~~~~~~---~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~~ 260 (262)
T PRK13394 216 --KVMLGKT---VDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGWF 260 (262)
T ss_pred --HHHhcCC---CCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCcee
Confidence 0111111 34578999999999998876432 2389999987743
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.6e-14 Score=128.32 Aligned_cols=205 Identities=12% Similarity=0.050 Sum_probs=130.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--C-----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--W-----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~-----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++|+++|++ +|++|++++|++... . ....++. ++.+|+.|++++.++++.+ . ++|+||
T Consensus 12 ~lG~~l~~~l~~------~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi 83 (255)
T TIGR01963 12 GIGLAIALALAA------AGANVVVNDLGEAGAEAAAKVATDAGGSVI-YLVADVTKEDEIADMIAAAAAEFG-GLDILV 83 (255)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHhcC-CCCEEE
Confidence 479999999999 899999999975321 0 0124678 8999999999877665542 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++.+.++ ..++++||++||...+... +.
T Consensus 84 ~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~~~~v~~ss~~~~~~~---------------~~- 146 (255)
T TIGR01963 84 NNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMK-KQGWGRIINIASAHGLVAS---------------PF- 146 (255)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCeEEEEEcchhhcCCC---------------CC-
Confidence 99974221 1245678999999999888754211 1257899999987554310 00
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee----
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR---- 206 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 206 (360)
...|+.+|...+ ...+++++++||+.++||...+.+.. . . +..+.+..
T Consensus 147 ---------~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~------~--~-~~~~~~~~~~~~ 208 (255)
T TIGR01963 147 ---------KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIAD------Q--A-KTRGIPEEQVIR 208 (255)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHh------h--h-cccCCCchHHHH
Confidence 122555543222 23589999999999999742111000 0 0 00000000
Q ss_pred -eeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 207 -YLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 207 -~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
..+... ...++++++|+|+++++++..+ ...|+.||+++|..
T Consensus 209 ~~~~~~~---~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~ 253 (255)
T TIGR01963 209 EVMLPGQ---PTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWT 253 (255)
T ss_pred HHHHccC---ccccCcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence 001111 3357899999999999888653 23589999987754
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-13 Score=125.28 Aligned_cols=200 Identities=12% Similarity=0.019 Sum_probs=132.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccCC---CCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h 70 (360)
.||++|+++|++ +|++|++++|++... ......+. ++.+|+.|++++.++++++. .++|+|||
T Consensus 17 ~iG~~l~~~l~~------~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~ 89 (251)
T PRK12826 17 GIGRAIAVRLAA------DGAEVIVVDICGDDAAATAELVEAAGGKAR-ARQVDVRDRAALKAAVAAGVEDFGRLDILVA 89 (251)
T ss_pred cHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 479999999999 899999999974321 01124578 89999999999988876541 02799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +....+++|+.++.++++++...++ ..+.++||++||...++.+ .
T Consensus 90 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~ii~~ss~~~~~~~----------------~-- 150 (251)
T PRK12826 90 NAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALI-RAGGGRIVLTSSVAGPRVG----------------Y-- 150 (251)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCcEEEEEechHhhccC----------------C--
Confidence 9974321 2345789999999999999864321 1246889999887544110 0
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+ +...|+.+|...+ ...+++++++||++++||.......... . ..+. ...|+
T Consensus 151 -----~-~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~-~---~~~~--~~~~~------ 212 (251)
T PRK12826 151 -----P-GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQW-A---EAIA--AAIPL------ 212 (251)
T ss_pred -----C-CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHH-H---HHHH--hcCCC------
Confidence 0 1334777664433 2458999999999999986543221110 0 0110 11121
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
..+++++|+|+++..++..+. ..|++|++.+|.
T Consensus 213 ------~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 213 ------GRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred ------CCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 135778999999988775432 358999997665
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=8.9e-14 Score=128.32 Aligned_cols=216 Identities=12% Similarity=0.033 Sum_probs=141.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC----CCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF----PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~----~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
.||++++++|++ +|++|++++|++... .. ...++. ++.+|++|++++.++++.+ . ++|+
T Consensus 18 ~IG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~~d~ 89 (276)
T PRK05875 18 GIGKGVAAGLVA------AGAAVMIVGRNPDKLAAAAEEIEALKGAGAVR-YEPADVTDEDQVARAVDAATAWHG-RLHG 89 (276)
T ss_pred HHHHHHHHHHHH------CCCeEEEEeCCHHHHHHHHHHHHhccCCCceE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCE
Confidence 489999999999 899999999874321 00 024577 8899999999887777643 2 2799
Q ss_pred EEEeeeecC---C----C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 68 LFWVMFQRL---K----S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 68 V~h~A~~~~---~----~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|||+|+... . + ....+++|+.++.++++++.+.+... +-.+|+++||...+.. .
T Consensus 90 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~sS~~~~~~---------------~ 153 (276)
T PRK05875 90 VVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-GGGSFVGISSIAASNT---------------H 153 (276)
T ss_pred EEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEechhhcCC---------------C
Confidence 999997421 1 2 34567899999999999887642111 2358999998765421 0
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
| +.+.|+.+|...+ ...++.++++||+.+.++.......... ..... ....+
T Consensus 154 ---------~-~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~---~~~~~--~~~~~--- 215 (276)
T PRK05875 154 ---------R-WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPE---LSADY--RACTP--- 215 (276)
T ss_pred ---------C-CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHH---HHHHH--HcCCC---
Confidence 0 1334887776555 2457999999999987753211111000 00000 01111
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCCCC--CCCceeccCCCcc----cHHHHHHHHHHHhCC
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTDRA--KNQAFNCTNGDVF----TWKSLWKLLSEIFDV 267 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~--~g~~yni~~g~~~----s~~el~~~ia~~~g~ 267 (360)
...+.+++|+|+++++++..+.. .|++||+++|..+ ++.|+++.+.+..|.
T Consensus 216 ---------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 216 ---------LPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred ---------CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence 12245689999999988865433 3899999998876 778887777665544
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.2e-14 Score=127.26 Aligned_cols=204 Identities=13% Similarity=0.011 Sum_probs=128.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++|+++|++ +|++|++++|++.... . ...+++ ++.+|++|++++.++++.+ . ++|.|+
T Consensus 15 ~iG~~la~~l~~------~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~~d~vi 86 (258)
T PRK12429 15 GIGLEIALALAK------EGAKVVIADLNDEAAAAAAEALQKAGGKAI-GVAMDVTDEEAINAGIDYAVETFG-GVDILV 86 (258)
T ss_pred hHHHHHHHHHHH------CCCeEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 379999999999 8999999999764310 0 134678 8999999999988887643 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++ ..+.++||++||...+... +
T Consensus 87 ~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~iss~~~~~~~---------------~-- 148 (258)
T PRK12429 87 NNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMK-AQGGGRIINMASVHGLVGS---------------A-- 148 (258)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHH-hcCCeEEEEEcchhhccCC---------------C--
Confidence 99974221 2334678999996666666654322 1257899999887544210 0
Q ss_pred CCCCCCCCCCCcHHHHHH--------HHh--cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee----
Q 037566 141 EDSLRLPFPNFYYAVEDI--------AAS--YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR---- 206 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~--------l~e--~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 206 (360)
+...|+.+|. +++ ...++.+.++||+.+++|........ .....+.+..
T Consensus 149 --------~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~---------~~~~~~~~~~~~~~ 211 (258)
T PRK12429 149 --------GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPD---------LAKERGISEEEVLE 211 (258)
T ss_pred --------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhh---------hccccCCChHHHHH
Confidence 1122444332 222 34689999999999999753211100 0000011000
Q ss_pred -eeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 207 -YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 207 -~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
..+... ...++++++|+|+++++++..+. ..|+.|++.+|-
T Consensus 212 ~~~~~~~---~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~ 255 (258)
T PRK12429 212 DVLLPLV---PQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGW 255 (258)
T ss_pred HHHhccC---CccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence 001111 23468999999999888875432 348999998763
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.8e-14 Score=125.87 Aligned_cols=203 Identities=13% Similarity=0.079 Sum_probs=133.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC------C--CCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW------F--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~------~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
+||++++++|++ +|++|++++|+..... + ...++. ++.+|++|++++.++++.+ . .+|+|
T Consensus 17 giG~~l~~~l~~------~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~v 88 (248)
T PRK07806 17 GIGADTAKILAG------AGAHVVVNYRQKAPRANKVVAEIEAAGGRAS-AVGADLTDEESVAALMDTAREEFG-GLDAL 88 (248)
T ss_pred cHHHHHHHHHHH------CCCEEEEEeCCchHhHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHhCC-CCcEE
Confidence 589999999998 8999999998653210 0 123567 8999999999988777632 2 27999
Q ss_pred EEeeeecC---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 69 FWVMFQRL---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 69 ~h~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
+|+|+... .++...+++|+.|+.++++++.+.++ .-.+||++||...+. .+..+..|.
T Consensus 89 i~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~---~~~~iv~isS~~~~~----------------~~~~~~~~~ 149 (248)
T PRK07806 89 VLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMP---AGSRVVFVTSHQAHF----------------IPTVKTMPE 149 (248)
T ss_pred EECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhcc---CCceEEEEeCchhhc----------------CccccCCcc
Confidence 99997432 24556789999999999999987531 224899998853321 011122221
Q ss_pred CCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc-ccc
Q 037566 146 LPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK-YTW 214 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~~ 214 (360)
...|+.+|...| ...++++++++|+.+-||-.... . . ... ++.. ..+
T Consensus 150 ----~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~------------~-~-~~~----~~~~~~~~ 207 (248)
T PRK07806 150 ----YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATL------------L-N-RLN----PGAIEARR 207 (248)
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhh------------h-c-cCC----HHHHHHHH
Confidence 334888887665 24678999999876655421100 0 0 000 0100 000
Q ss_pred cccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcc
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVF 252 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~ 252 (360)
....++++++|+|++++.++..+...|++|+|++++.+
T Consensus 208 ~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~~~ 245 (248)
T PRK07806 208 EAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGADYF 245 (248)
T ss_pred hhhcccCCHHHHHHHHHHHhhccccCccEEEecCccce
Confidence 11236789999999999998766567999999988754
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.9e-13 Score=123.26 Aligned_cols=201 Identities=15% Similarity=0.087 Sum_probs=130.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++|+++|++ +|++|++++|+.... . ....++. ++.+|++|++++.++++.+ .. +|.|
T Consensus 13 ~iG~~la~~L~~------~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~-id~v 84 (256)
T PRK12745 13 GIGLGIARALAA------AGFDLAINDRPDDEELAATQQELRALGVEVI-FFPADVADLSAHEAMLDAAQAAWGR-IDCL 84 (256)
T ss_pred hHHHHHHHHHHH------CCCEEEEEecCchhHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHhcCC-CCEE
Confidence 489999999999 899999999874321 0 0124678 9999999999888777654 22 7999
Q ss_pred EEeeeecC-----------CChhHhhhhhHHHHHHHHHHHHhhccCCCC-----ccEEEEeccCccccccccCCcccCCc
Q 037566 69 FWVMFQRL-----------KSEEINISNNSTMFKNVMSVVVDSNKGRSR-----LRHVTLLMGTKHYMGPVFDPSLVGQL 132 (360)
Q Consensus 69 ~h~A~~~~-----------~~~~~~~~vNv~gt~nll~a~~~~~~~~~~-----v~r~v~~SS~~vYg~~~~~~~~~g~~ 132 (360)
||+|+... .+.++.+++|+.|+.++++++.+.++...+ +.+||++||...+...
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 154 (256)
T PRK12745 85 VNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS---------- 154 (256)
T ss_pred EECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC----------
Confidence 99998521 123456899999999999998654321111 6789999987554210
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcC
Q 037566 133 IGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQG 202 (360)
Q Consensus 133 ~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~ 202 (360)
. +...|+.+|...+ ...+++++++||+.++++.......... ..+. .+
T Consensus 155 -------~--------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-----~~~~--~~ 212 (256)
T PRK12745 155 -------P--------NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYD-----ALIA--KG 212 (256)
T ss_pred -------C--------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHH-----hhhh--hc
Confidence 0 1223666555443 2468999999999999875322111100 0010 11
Q ss_pred CCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc
Q 037566 203 LPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 252 (360)
Q Consensus 203 ~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~ 252 (360)
. . ...++.+..|+++++.+++.... ..|++|||.+|...
T Consensus 213 ~-~----------~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 213 L-V----------PMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSI 253 (256)
T ss_pred C-C----------CcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence 1 1 11245578889998887764322 34899999877543
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-13 Score=124.87 Aligned_cols=212 Identities=9% Similarity=0.034 Sum_probs=139.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
.||++|+++|++ +|++|++++|++... .....+++ ++.+|++|++++.++++++ . ++|+|+|+
T Consensus 13 ~iG~~la~~L~~------~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~ 84 (257)
T PRK07074 13 GIGQALARRFLA------AGDRVLALDIDAAALAAFADALGDARFV-PVACDLTDAASLAAALANAAAERG-PVDVLVAN 84 (257)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEEC
Confidence 379999999998 899999999875431 01124678 8999999999988777653 2 27999999
Q ss_pred eeecCC------Ch---hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 72 MFQRLK------SE---EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 72 A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+.... ++ ...+++|+.++.++++++...++ ..+..+||++||...+.. . .
T Consensus 85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~-----------------~--~ 144 (257)
T PRK07074 85 AGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGML-KRSRGAVVNIGSVNGMAA-----------------L--G 144 (257)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCeEEEEEcchhhcCC-----------------C--C
Confidence 985321 22 23467999999999999854321 114578999988532210 0 0
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
...|+.+|...+ ...+++++++||+.++++.......... .++.... .
T Consensus 145 -------~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~--~----------- 202 (257)
T PRK07074 145 -------HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANP--QVFEELK--K----------- 202 (257)
T ss_pred -------CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccCh--HHHHHHH--h-----------
Confidence 012565555333 2358999999999998874321111000 0000000 0
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccHHHHHHHHHH
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWKSLWKLLSE 263 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~~el~~~ia~ 263 (360)
+....++++++|+++++++++..+ ...|+.+++.+|...+.+|+.+.+.+
T Consensus 203 -~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 203 -WYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred -cCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 012347889999999999988542 23489999999999999998877643
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.1e-14 Score=128.25 Aligned_cols=212 Identities=15% Similarity=0.186 Sum_probs=133.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKS 78 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~ 78 (360)
+|+++++.|++ .+++|+++.|++... .+...+++ ++.+|+.|++++.++++|+ |.||.+.....
T Consensus 10 ~G~~v~~~L~~------~~~~V~~l~R~~~~~~~~~l~~~g~~-vv~~d~~~~~~l~~al~g~----d~v~~~~~~~~-- 76 (233)
T PF05368_consen 10 QGRSVVRALLS------AGFSVRALVRDPSSDRAQQLQALGAE-VVEADYDDPESLVAALKGV----DAVFSVTPPSH-- 76 (233)
T ss_dssp HHHHHHHHHHH------TTGCEEEEESSSHHHHHHHHHHTTTE-EEES-TT-HHHHHHHHTTC----SEEEEESSCSC--
T ss_pred HHHHHHHHHHh------CCCCcEEEEeccchhhhhhhhcccce-EeecccCCHHHHHHHHcCC----ceEEeecCcch--
Confidence 69999999999 899999999987431 12235789 9999999999999999995 67776644222
Q ss_pred hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC-CCC--CcHHH
Q 037566 79 EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP-FPN--FYYAV 155 (360)
Q Consensus 79 ~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p-~p~--~~Y~~ 155 (360)
..-.....|+++||.++ ||+|||+.|-...+ ++.....| .+. ..+..
T Consensus 77 -----~~~~~~~~~li~Aa~~a-----gVk~~v~ss~~~~~--------------------~~~~~~~p~~~~~~~k~~i 126 (233)
T PF05368_consen 77 -----PSELEQQKNLIDAAKAA-----GVKHFVPSSFGADY--------------------DESSGSEPEIPHFDQKAEI 126 (233)
T ss_dssp -----CCHHHHHHHHHHHHHHH-----T-SEEEESEESSGT--------------------TTTTTSTTHHHHHHHHHHH
T ss_pred -----hhhhhhhhhHHHhhhcc-----ccceEEEEEecccc--------------------cccccccccchhhhhhhhh
Confidence 12244568999999998 79999985532211 11111111 011 11223
Q ss_pred HHHHHhcCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccc-cCHHHHHHHHHHHH
Q 037566 156 EDIAASYSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDM-SDSRVLAEQQIWAA 234 (360)
Q Consensus 156 ek~l~e~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~-~~v~dla~a~~~a~ 234 (360)
|+.+. ..+++|+++||+.-+.... ..... ...+ +.....+.+.+++. .-..+ ++.+|++++...++
T Consensus 127 e~~l~--~~~i~~t~i~~g~f~e~~~----~~~~~---~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~Dvg~~va~il 193 (233)
T PF05368_consen 127 EEYLR--ESGIPYTIIRPGFFMENLL----PPFAP---VVDI-KKSKDVVTLPGPGN---QKAVPVTDTRDVGRAVAAIL 193 (233)
T ss_dssp HHHHH--HCTSEBEEEEE-EEHHHHH----TTTHH---TTCS-CCTSSEEEEETTST---SEEEEEEHHHHHHHHHHHHH
T ss_pred hhhhh--hccccceeccccchhhhhh----hhhcc---cccc-cccceEEEEccCCC---ccccccccHHHHHHHHHHHH
Confidence 44443 3499999999986554211 10000 0000 00111244555543 11233 58999999998888
Q ss_pred cCCCCC--CCceeccCCCcccHHHHHHHHHHHhCCCcc
Q 037566 235 TTDRAK--NQAFNCTNGDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 235 ~~~~~~--g~~yni~~g~~~s~~el~~~ia~~~g~~~~ 270 (360)
.+|... |+.|+++ |+.+|++|+.+.+.+.+|.+..
T Consensus 194 ~~p~~~~~~~~~~~~-~~~~t~~eia~~~s~~~G~~v~ 230 (233)
T PF05368_consen 194 LDPEKHNNGKTIFLA-GETLTYNEIAAILSKVLGKKVK 230 (233)
T ss_dssp HSGGGTTEEEEEEEG-GGEEEHHHHHHHHHHHHTSEEE
T ss_pred cChHHhcCCEEEEeC-CCCCCHHHHHHHHHHHHCCccE
Confidence 877554 6777775 4889999999999999998653
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.2e-13 Score=124.57 Aligned_cols=208 Identities=14% Similarity=0.085 Sum_probs=129.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
.||++++++|++ +|++|++++|++... .....+++ ++.+|++|++++.++++.+ . ++|.|+|+
T Consensus 22 ~iG~~~a~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~ 93 (264)
T PRK12829 22 GIGRAIAEAFAE------AGARVHVCDVSEAALAATAARLPGAKVT-ATVADVADPAQVERVFDTAVERFG-GLDVLVNN 93 (264)
T ss_pred cHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHhcCceE-EEEccCCCHHHHHHHHHHHHHHhC-CCCEEEEC
Confidence 379999999999 899999999975321 01112467 8999999999988877643 2 27999999
Q ss_pred eeec-CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCc-cEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 72 MFQR-LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRL-RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 72 A~~~-~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v-~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+.. .. +.+..+++|+.++.++++++.+.++.. +. ++|+++||...+. | .
T Consensus 94 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~~vv~~ss~~~~~---------~--------~- 154 (264)
T PRK12829 94 AGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKAS-GHGGVIIALSSVAGRL---------G--------Y- 154 (264)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEeccccccc---------C--------C-
Confidence 9854 11 235678999999999999985432111 23 5677777643211 0 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee-eeC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR-YLG 209 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G 209 (360)
+ +...|+.+|...+ ...+++++++||++++||.....+.. ..+..+.+.. +..
T Consensus 155 ------~-~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~---------~~~~~~~~~~~~~~ 218 (264)
T PRK12829 155 ------P-GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEA---------RAQQLGIGLDEMEQ 218 (264)
T ss_pred ------C-CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhh---------hhhccCCChhHHHH
Confidence 0 1223666665433 23589999999999999864221110 0000011100 000
Q ss_pred CcccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCCc
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGDV 251 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~~ 251 (360)
..........+++++|+|+++..++.. +...|+.|+|++|..
T Consensus 219 ~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 219 EYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVE 262 (264)
T ss_pred HHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence 000001223578999999998877643 233589999998864
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.4e-13 Score=122.75 Aligned_cols=197 Identities=12% Similarity=0.034 Sum_probs=126.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEE-ecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccCC---------C
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGT-ARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSIS---------Q 63 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l-~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~~---------~ 63 (360)
.||++|+++|++ +|++|+++ .|+..+. .. ....++ ++.+|++|++++.++++.+. .
T Consensus 17 ~iG~~la~~l~~------~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~ 89 (254)
T PRK12746 17 GIGRAIAMRLAN------DGALVAIHYGRNKQAADETIREIESNGGKAF-LIEADLNSIDGVKKLVEQLKNELQIRVGTS 89 (254)
T ss_pred hHHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEE-EEEcCcCCHHHHHHHHHHHHHHhccccCCC
Confidence 489999999999 89998776 4543211 00 124577 89999999999888776420 0
Q ss_pred CccEEEEeeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCC
Q 037566 64 EVTHLFWVMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIG 134 (360)
Q Consensus 64 ~v~~V~h~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~ 134 (360)
++|+|||+|+.... + ....+++|+.|+.++++++.+.++ ...+||++||..+|...
T Consensus 90 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~v~~sS~~~~~~~------------ 154 (254)
T PRK12746 90 EIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLR---AEGRVINISSAEVRLGF------------ 154 (254)
T ss_pred CccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhh---cCCEEEEECCHHhcCCC------------
Confidence 27999999985321 1 244678999999999999987421 23589999987665310
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCC
Q 037566 135 HDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLP 204 (360)
Q Consensus 135 ~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (360)
+ +...|+.+|...+ ...++++++++|+.+++|-......... +.... . ...
T Consensus 155 ------------~-~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~---~~~~~-~-~~~- 215 (254)
T PRK12746 155 ------------T-GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPE---IRNFA-T-NSS- 215 (254)
T ss_pred ------------C-CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChh---HHHHH-H-hcC-
Confidence 0 1233666665433 2458999999999998874322111000 00000 0 011
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
....+.+++|+|+++.+++..+. ..|++|||.+|
T Consensus 216 -----------~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 216 -----------VFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred -----------CcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 11245679999999887775432 24899999876
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.3e-13 Score=120.62 Aligned_cols=197 Identities=13% Similarity=0.082 Sum_probs=130.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|..... . .....+. ++.+|++|.+++.++++.+ .. +|.||
T Consensus 17 ~iG~~la~~l~~------~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~-id~vi 88 (250)
T PRK07774 17 GIGQAYAEALAR------EGASVVVADINAEGAERVAKQIVADGGTAI-AVQVDVSDPDSAKAMADATVSAFGG-IDYLV 88 (250)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHhCC-CCEEE
Confidence 489999999999 899999999975321 0 0123566 8999999999887766532 22 79999
Q ss_pred EeeeecCC------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 70 WVMFQRLK------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 70 h~A~~~~~------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+|+.... ..+..+++|+.++.++++++...+... +.++||++||...|+.
T Consensus 89 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~---------------- 151 (250)
T PRK07774 89 NNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR-GGGAIVNQSSTAAWLY---------------- 151 (250)
T ss_pred ECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh-CCcEEEEEecccccCC----------------
Confidence 99985321 233567899999999999988642111 2468999998765431
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
.+.|+.+|...+ ...++.+++++|+.+..+......... ...... .+.+..
T Consensus 152 ------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~----~~~~~~--~~~~~~- 212 (250)
T PRK07774 152 ------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKE----FVADMV--KGIPLS- 212 (250)
T ss_pred ------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHH----HHHHHH--hcCCCC-
Confidence 123777666443 235899999999988876543221111 111111 122211
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 252 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~ 252 (360)
-+.+++|+|++++.++..+. ..|++||+.+|..+
T Consensus 213 -----------~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~ 248 (250)
T PRK07774 213 -----------RMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII 248 (250)
T ss_pred -----------CCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence 12357889999988876432 35899999988755
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.6e-13 Score=119.32 Aligned_cols=190 Identities=13% Similarity=0.059 Sum_probs=129.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
.||++++++|++ +|++|++++|++... ......++ ++.+|++|.+++.++++++ . ++|.|+|+
T Consensus 18 ~iG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~ 89 (239)
T PRK12828 18 GLGRATAAWLAA------RGARVALIGRGAAPLSQTLPGVPADALR-IGGIDLVDPQAARRAVDEVNRQFG-RLDALVNI 89 (239)
T ss_pred cHhHHHHHHHHH------CCCeEEEEeCChHhHHHHHHHHhhcCce-EEEeecCCHHHHHHHHHHHHHHhC-CcCEEEEC
Confidence 489999999999 899999999975431 11234678 8999999999888777643 2 27999999
Q ss_pred eeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 72 MFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 72 A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+.... + ..+.+.+|+.++.++++++.+.++ ..++++||++||...|+..
T Consensus 90 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~~-------------------- 148 (239)
T PRK12828 90 AGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALT-ASGGGRIVNIGAGAALKAG-------------------- 148 (239)
T ss_pred CcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHH-hcCCCEEEEECchHhccCC--------------------
Confidence 874221 1 234678999999999999865322 1257899999998766421
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
+ +...|+.+|...+ ...++.+.++||+.++++..... .+ .+.
T Consensus 149 -~----~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------------------~~---~~~-- 200 (239)
T PRK12828 149 -P----GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------------------MP---DAD-- 200 (239)
T ss_pred -C----CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------------------CC---chh--
Confidence 0 1223665554322 24589999999999998632110 00 011
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
...+++++|+|+++.+++..+ ...|+.+++.+|..
T Consensus 201 ----~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~~ 237 (239)
T PRK12828 201 ----FSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGVA 237 (239)
T ss_pred ----hhcCCCHHHHHHHHHHHhCcccccccceEEEecCCEe
Confidence 122578999999988887643 23488888877754
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.2e-12 Score=119.31 Aligned_cols=147 Identities=14% Similarity=0.044 Sum_probs=104.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccCC---CCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h~A~ 73 (360)
.||++|+++|++ +|++|++++|++... .....++. ++.+|++|++++.++++++. ..+|+|+|+|+
T Consensus 15 giG~~la~~l~~------~G~~V~~~~r~~~~~~~l~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag 87 (277)
T PRK06180 15 GFGRALAQAALA------AGHRVVGTVRSEAARADFEALHPDRAL-ARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAG 87 (277)
T ss_pred hHHHHHHHHHHh------CcCEEEEEeCCHHHHHHHHhhcCCCee-EEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 389999999998 899999999975431 01124678 89999999999888776531 02799999998
Q ss_pred ecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... + ....+++|+.|+.++++++...++.. +..+||++||.+.+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~iSS~~~~~~~---------------------- 144 (277)
T PRK06180 88 YGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-RRGHIVNITSMGGLITM---------------------- 144 (277)
T ss_pred ccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCCEEEEEecccccCCC----------------------
Confidence 5321 1 24568999999999999976532212 45689999987544210
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
| +...|+.+|...+ ...|++++++||+.+.++.
T Consensus 145 --~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 187 (277)
T PRK06180 145 --P-GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW 187 (277)
T ss_pred --C-CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence 0 1334777775443 2358999999999998764
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-13 Score=124.87 Aligned_cols=211 Identities=13% Similarity=0.065 Sum_probs=132.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
.||++|+++|++ +|++|++++|+..... .....+. ++.+|++|.+++.++++.+ . ++|+++|+|
T Consensus 17 ~iG~~ia~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~~a 88 (257)
T PRK07067 17 GIGEAVAERYLA------EGARVVIADIKPARARLAALEIGPAAI-AVSLDVTRQDSIDRIVAAAVERFG-GIDILFNNA 88 (257)
T ss_pred hHHHHHHHHHHH------cCCEEEEEcCCHHHHHHHHHHhCCceE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 379999999999 8999999998754210 0124578 8999999999988877643 2 279999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc-ccccccCCcccCCcCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH-YMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
+.... +.+..+++|+.++.++++++...++....-.+||++||... ++.
T Consensus 89 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------------- 147 (257)
T PRK07067 89 ALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE--------------------- 147 (257)
T ss_pred CcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC---------------------
Confidence 84321 24456899999999999999764211111247999988532 110
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
.+...|+.+|...+ ...+++++++||+.|+++......... ..+..+ ..+......+...
T Consensus 148 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~ 217 (257)
T PRK07067 148 -----ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALF---ARYENR--PPGEKKRLVGEAV 217 (257)
T ss_pred -----CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhh---hhccCC--CHHHHHHHHhhcC
Confidence 02334776665322 346899999999999997432110000 000000 0000000011111
Q ss_pred cccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 253 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s 253 (360)
....+.+.+|+|+++++++..+. ..|++||+.+|..+|
T Consensus 218 ---~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 218 ---PLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred ---CCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCEeCC
Confidence 23467889999999998876432 358999998886553
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-12 Score=119.80 Aligned_cols=207 Identities=11% Similarity=0.006 Sum_probs=130.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------C--CCCCCceeeEeeccCChHHHHHHHcc----CCCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------W--FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~--~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~ 67 (360)
.||++|+++|++ +|++|++++|++... . ....+++ ++.+|++|++++.+ ++. ... +|+
T Consensus 14 ~iG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~-~~~~~~~~~~-id~ 84 (280)
T PRK06914 14 GFGLLTTLELAK------KGYLVIATMRNPEKQENLLSQATQLNLQQNIK-VQQLDVTDQNSIHN-FQLVLKEIGR-IDL 84 (280)
T ss_pred hHHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhcCCCCcee-EEecCCCCHHHHHH-HHHHHHhcCC-eeE
Confidence 489999999999 899999999875421 0 0124688 89999999988765 443 232 799
Q ss_pred EEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 68 LFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 68 V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+|+|+.... +.+..+++|+.|+.++++++...++ ..+..+||++||...+...
T Consensus 85 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~vsS~~~~~~~---------------- 147 (280)
T PRK06914 85 LVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMR-KQKSGKIINISSISGRVGF---------------- 147 (280)
T ss_pred EEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEECcccccCCC----------------
Confidence 9999985321 2335678999999999999754322 1246789999885332100
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchh-------HHHH-HHHHHHHhh
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNS-------LLTL-AVYATICRH 200 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~-------~~~~-~~~~~~~~~ 200 (360)
.+...|+.+|...+ ...+++++++||+.++++........ .... .....+...
T Consensus 148 ---------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (280)
T PRK06914 148 ---------PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH 218 (280)
T ss_pred ---------CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH
Confidence 01233666554433 24589999999999988732110000 0000 000000000
Q ss_pred cCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHH
Q 037566 201 QGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWK 255 (360)
Q Consensus 201 ~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~ 255 (360)
. .. ....+.+.+|+|++++.++.++.. +..||++++..+++.
T Consensus 219 ~-------~~-----~~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 219 I-------NS-----GSDTFGNPIDVANLIVEIAESKRP-KLRYPIGKGVKLMIL 260 (280)
T ss_pred H-------hh-----hhhccCCHHHHHHHHHHHHcCCCC-CcccccCCchHHHHH
Confidence 0 00 113467899999999999876543 467999988877654
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=6e-13 Score=120.82 Aligned_cols=200 Identities=11% Similarity=0.007 Sum_probs=131.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---C-----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---W-----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~-----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
+||++|+++|++ +|++|++..|+.... . ....++. ++.+|++|++++.++++.+ . .+|+|
T Consensus 17 ~iG~~l~~~l~~------~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~v 88 (252)
T PRK06077 17 GIGRAIAVRLAK------EGSLVVVNAKKRAEEMNETLKMVKENGGEGI-GVLADVSTREGCETLAKATIDRYG-VADIL 88 (252)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCChHHHHHHHHHHHHcCCeeE-EEEeccCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 489999999998 899988877643211 0 0123456 7899999999887776642 2 27999
Q ss_pred EEeeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||+|+.... + .+..+++|+.++.++++++.+.++ .-.+||++||...|+..
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~~sS~~~~~~~----------------- 148 (252)
T PRK06077 89 VNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMR---EGGAIVNIASVAGIRPA----------------- 148 (252)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhh---cCcEEEEEcchhccCCC-----------------
Confidence 999985221 1 245689999999999999987532 23589999987655310
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+.+.|+.+|...+ ...++.+.+++|+.|.++.......... .. . + .+...
T Consensus 149 --------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~-~~----~-~------~~~~~ 208 (252)
T PRK06077 149 --------YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLG-MS----E-K------EFAEK 208 (252)
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhccc-cc----H-H------HHHHh
Confidence 12345887776544 2237899999999997763211110000 00 0 0 00000
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDV 251 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~ 251 (360)
. .....+++++|+|++++.++..+...|++||+.+|..
T Consensus 209 ~---~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 209 F---TLMGKILDPEEVAEFVAAILKIESITGQVFVLDSGES 246 (252)
T ss_pred c---CcCCCCCCHHHHHHHHHHHhCccccCCCeEEecCCee
Confidence 0 0123578999999999998876666799999998864
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.1e-12 Score=116.42 Aligned_cols=199 Identities=14% Similarity=0.076 Sum_probs=129.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccCC---CCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h 70 (360)
.||.+|+++|++ +|++|++++|++.... ....++. ++.+|++|++++.++++++. .++|.|+|
T Consensus 16 ~iG~~l~~~l~~------~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 88 (246)
T PRK05653 16 GIGRAIALRLAA------DGAKVVIYDSNEEAAEALAAELRAAGGEAR-VLVFDVSDEAAVRALIEAAVEAFGALDILVN 88 (246)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCChhHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 379999999999 8999999999764310 0134577 88999999999888777531 02799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +....++.|+.++.++++++...++ ..++++||++||...+.. .
T Consensus 89 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~~ss~~~~~~--------------~----- 148 (246)
T PRK05653 89 NAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMI-KARYGRIVNISSVSGVTG--------------N----- 148 (246)
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECcHHhccC--------------C-----
Confidence 9975321 1245688999999999999864321 125689999988632210 0
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
.+...|+.+|...+ ...++.++++||+.++|+........ ..... ....
T Consensus 149 ------~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~-----~~~~~--~~~~-------- 207 (246)
T PRK05653 149 ------PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEE-----VKAEI--LKEI-------- 207 (246)
T ss_pred ------CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHH-----HHHHH--HhcC--------
Confidence 01223555553222 34589999999999999864321110 00000 0111
Q ss_pred ccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCCc
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGDV 251 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~~ 251 (360)
....+++.+|+|+++.+++.. +...|+.|++++|..
T Consensus 208 ----~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 245 (246)
T PRK05653 208 ----PLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGMY 245 (246)
T ss_pred ----CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCee
Confidence 113457789999999888753 233589999988763
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-12 Score=118.42 Aligned_cols=200 Identities=11% Similarity=0.061 Sum_probs=131.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CC-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC-
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WF-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~- 77 (360)
.||+++++.|++ +|++|++++|++... .. ...+++ ++.+|++|.+++.++++.... +|+|||+|+....
T Consensus 20 ~iG~~~a~~l~~------~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~-~d~vi~~ag~~~~~ 91 (245)
T PRK07060 20 GIGRACAVALAQ------RGARVVAAARNAAALDRLAGETGCE-PLRLDVGDDAAIRAALAAAGA-FDGLVNCAGIASLE 91 (245)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhCCe-EEEecCCCHHHHHHHHHHhCC-CCEEEECCCCCCCC
Confidence 379999999999 899999999875321 00 112467 889999999999888876543 8999999985321
Q ss_pred --------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 78 --------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 78 --------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
+.++.+++|+.++.++++++.+.++......+||++||...|... + +
T Consensus 92 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------------------~-~ 146 (245)
T PRK07060 92 SALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------------------------P-D 146 (245)
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------------------------C-C
Confidence 234567899999999999987642111123689999987654310 0 1
Q ss_pred CCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 150 NFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 150 ~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
...|+.+|...+ ...+++++.+||+.++++.......... ....+. ... ....
T Consensus 147 ~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~---~~~~~~--~~~------------~~~~ 209 (245)
T PRK07060 147 HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQ---KSGPML--AAI------------PLGR 209 (245)
T ss_pred CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHH---HHHHHH--hcC------------CCCC
Confidence 223776665443 2358999999999999985421111100 000010 011 1124
Q ss_pred ccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 220 MSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
+++++|+|++++.++..+. ..|+.+++.+|.
T Consensus 210 ~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK07060 210 FAEVDDVAAPILFLLSDAASMVSGVSLPVDGGY 242 (245)
T ss_pred CCCHHHHHHHHHHHcCcccCCccCcEEeECCCc
Confidence 6789999999998876542 248888886653
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.7e-12 Score=118.52 Aligned_cols=199 Identities=14% Similarity=0.048 Sum_probs=127.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--C-----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--W-----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~-----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|+.... . ....++. ++.+|++|++++.++++.+ . ++|+||
T Consensus 21 ~iG~~la~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi 92 (274)
T PRK07775 21 GIGAATAIELAA------AGFPVALGARRVEKCEELVDKIRADGGEAV-AFPLDVTDPDSVKSFVAQAEEALG-EIEVLV 92 (274)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHhcC-CCCEEE
Confidence 489999999999 899999998864321 0 0123577 8899999999988877643 2 279999
Q ss_pred EeeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... + ....+++|+.++.++++++...++ ..+..+||++||...|+..
T Consensus 93 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~-~~~~g~iv~isS~~~~~~~------------------ 153 (274)
T PRK07775 93 SGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMI-ERRRGDLIFVGSDVALRQR------------------ 153 (274)
T ss_pred ECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCceEEEECChHhcCCC------------------
Confidence 99985321 1 234578999999999999864321 1135689999987655310
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
| +...|+.+|...+ ...|++++++||+.+.++.......... ......... .+ +.
T Consensus 154 ------~-~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~-~~~~~~~~~-~~------~~ 218 (274)
T PRK07775 154 ------P-HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVI-GPMLEDWAK-WG------QA 218 (274)
T ss_pred ------C-CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhh-hHHHHHHHH-hc------cc
Confidence 0 1234777776554 2358999999998775442111111100 001011100 00 11
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCCCCCCceecc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCT 247 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~ 247 (360)
....+++++|+|++++.++.++ ..+.+||+.
T Consensus 219 -----~~~~~~~~~dva~a~~~~~~~~-~~~~~~~~~ 249 (274)
T PRK07775 219 -----RHDYFLRASDLARAITFVAETP-RGAHVVNME 249 (274)
T ss_pred -----ccccccCHHHHHHHHHHHhcCC-CCCCeeEEe
Confidence 1245789999999999888754 346788885
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.2e-12 Score=117.40 Aligned_cols=213 Identities=11% Similarity=-0.042 Sum_probs=132.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++.+|+.... .+ ...++. ++.+|++|.+++.++++.+ . ++|+||
T Consensus 17 gIG~ala~~La~------~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~id~li 88 (275)
T PRK05876 17 GIGLATGTEFAR------RGARVVLGDVDKPGLRQAVNHLRAEGFDVH-GVMCDVRHREEVTHLADEAFRLLG-HVDVVF 88 (275)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEeCCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 389999999999 899999999875321 00 123567 8999999999988877653 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...+.......+||++||...|...
T Consensus 89 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~------------------ 150 (275)
T PRK05876 89 SNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN------------------ 150 (275)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC------------------
Confidence 99985221 234567999999999999986432111114689999987654310
Q ss_pred CCCCCCCCCCCcHHHHHHH----Hh------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIA----AS------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l----~e------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
| +...|+.+|.. .+ ...|+.+++++|+.+.++...+..... . ............|.
T Consensus 151 ------~-~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----~---~~~~~~~~~~~~~~ 216 (275)
T PRK05876 151 ------A-GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIR----G---AACAQSSTTGSPGP 216 (275)
T ss_pred ------C-CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhc----C---cccccccccccccc
Confidence 1 13348877763 22 346899999999999876432210000 0 00000111112232
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHH
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLS 262 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia 262 (360)
.. ...++++++|+|++++.++.. |+.|.+.+ +..+.++.....
T Consensus 217 ~~---~~~~~~~~~dva~~~~~ai~~----~~~~~~~~--~~~~~~~~~~~~ 259 (275)
T PRK05876 217 LP---LQDDNLGVDDIAQLTADAILA----NRLYVLPH--AASRASIRRRFE 259 (275)
T ss_pred cc---ccccCCCHHHHHHHHHHHHHc----CCeEEecC--hhhHHHHHHHHH
Confidence 22 235678999999999988753 45565542 234444444333
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.42 E-value=7e-12 Score=112.70 Aligned_cols=195 Identities=15% Similarity=0.078 Sum_probs=125.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---C---C--CCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---W---F--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~---~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++++++|++ +|++|++++|+..+. . . ....+. ++.+|++|++++.++++++ . ++|.|
T Consensus 9 ~iG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~v 80 (239)
T TIGR01830 9 GIGRAIALKLAK------EGAKVIITYRSSEEGAEEVVEELKAYGVKAL-GVVCDVSDREDVKAVVEEIEEELG-PIDIL 80 (239)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCchhHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHhC-CCCEE
Confidence 479999999999 899999999875221 0 0 123477 8999999999988887653 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc-cccccccCCcccCCcCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK-HYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~-vYg~~~~~~~~~g~~~~~~~p 138 (360)
+|+|+.... +.+..+++|+.++.++++++...+. ..+.++|+++||.+ +||.+
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~~~~g~~---------------- 143 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMI-KQRSGRIINISSVVGLMGNA---------------- 143 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEECCccccCCCC----------------
Confidence 999985321 2356789999999999999875311 11456899998854 33311
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
+...|+.+|...+ ...++.++++||+.+.++.... ++.. ....+. ...+.
T Consensus 144 ----------~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~-~~~~----~~~~~~--~~~~~--- 203 (239)
T TIGR01830 144 ----------GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK-LSEK----VKKKIL--SQIPL--- 203 (239)
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh-cChH----HHHHHH--hcCCc---
Confidence 0123665554222 3468999999998886653211 1110 111111 11121
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
.-+.+++|+++++++++..+ ...|++||+..|
T Consensus 204 ---------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 204 ---------GRFGTPEEVANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred ---------CCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 11345788999988777443 345899999655
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.5e-12 Score=114.26 Aligned_cols=197 Identities=14% Similarity=0.051 Sum_probs=128.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---C---C--CCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---W---F--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~---~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++++++|++ +|++|+++.++.... . . ...++. ++.+|++|++++.++++.+ .. +|+|
T Consensus 17 ~iG~~la~~l~~------~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~-id~v 88 (247)
T PRK12935 17 GIGKAITVALAQ------EGAKVVINYNSSKEAAENLVNELGKEGHDVY-AVQADVSKVEDANRLVEEAVNHFGK-VDIL 88 (247)
T ss_pred HHHHHHHHHHHH------cCCEEEEEcCCcHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHcCC-CCEE
Confidence 379999999999 899998776543221 0 0 123577 8999999999988877653 32 7999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||+|+.... ..++.+++|+.++.++++++...+... +..+||++||...+.. .
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~--------------~--- 150 (247)
T PRK12935 89 VNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-EEGRIISISSIIGQAG--------------G--- 150 (247)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcchhhcCC--------------C---
Confidence 999985221 344578999999999999987532101 3468999988543211 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
.+...|+.+|...+ ...++++++++|+.|.++.... ... ....... .+.
T Consensus 151 --------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~----~~~~~~~--~~~------ 209 (247)
T PRK12935 151 --------FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPE----EVRQKIV--AKI------ 209 (247)
T ss_pred --------CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccH----HHHHHHH--HhC------
Confidence 01234777666322 2358999999999997753211 110 0000010 011
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCC-CCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDR-AKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~-~~g~~yni~~g~ 250 (360)
...++.+++|+++++++++.... ..|+.||+.+|.
T Consensus 210 ------~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 210 ------PKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGGL 245 (247)
T ss_pred ------CCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence 12356789999999998875432 358999998774
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.3e-12 Score=114.79 Aligned_cols=146 Identities=15% Similarity=0.177 Sum_probs=106.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~ 76 (360)
.||++++++|++ +|++|++++|++.... ...+++ ++.+|++|++++.++++++ . .+|+|+|+|+...
T Consensus 15 ~iG~~~a~~l~~------~g~~V~~~~r~~~~~~-~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~g-~~d~li~~ag~~~ 85 (270)
T PRK06179 15 GIGRATAEKLAR------AGYRVFGTSRNPARAA-PIPGVE-LLELDVTDDASVQAAVDEVIARAG-RIDVLVNNAGVGL 85 (270)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCChhhcc-ccCCCe-eEEeecCCHHHHHHHHHHHHHhCC-CCCEEEECCCCCC
Confidence 379999999999 8999999999864422 135788 9999999999998888753 2 2799999998532
Q ss_pred C---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 77 K---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 77 ~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
. +.+..+++|+.|+.++++++...++ ..+.++||++||...+.. . |
T Consensus 86 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~---------------~---------~ 140 (270)
T PRK06179 86 AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMR-AQGSGRIINISSVLGFLP---------------A---------P 140 (270)
T ss_pred CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCceEEEECCccccCC---------------C---------C
Confidence 1 2356789999999999999754322 125789999998644321 0 0
Q ss_pred CCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCC
Q 037566 148 FPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASS 181 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~ 181 (360)
....|+.+|...+ ...|++++++||+.+.++..
T Consensus 141 -~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 141 -YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred -CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 1234776665433 34699999999999988743
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.9e-12 Score=113.86 Aligned_cols=199 Identities=8% Similarity=-0.032 Sum_probs=124.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
.||++++++|++ +|++|++++|++... . .....+. ++.+|++|.+++.++++.+ .. +|+++|
T Consensus 19 gIG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~-id~lv~ 90 (260)
T PRK12823 19 GIGRGVALRAAA------EGARVVLVDRSELVHEVAAELRAAGGEAL-ALTADLETYAGAQAAMAAAVEAFGR-IDVLIN 90 (260)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCchHHHHHHHHHHhcCCeEE-EEEEeCCCHHHHHHHHHHHHHHcCC-CeEEEE
Confidence 489999999999 899999999874211 0 0123577 8999999998877766532 22 799999
Q ss_pred eeeecC--C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRL--K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+... . +.+..+++|+.++..+++++...++. .+..+||++||...|+..
T Consensus 91 nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~~------------------ 151 (260)
T PRK12823 91 NVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLA-QGGGAIVNVSSIATRGIN------------------ 151 (260)
T ss_pred CCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCeEEEEcCccccCCC------------------
Confidence 997421 1 22346789999888777776643221 145689999987655310
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCc---------chhHHHHHHHHHHHhhc
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSL---------NNSLLTLAVYATICRHQ 201 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~---------~~~~~~~~~~~~~~~~~ 201 (360)
...|+.+|...+ ...++++.+++|++|++|..... ...... .+...+ ..
T Consensus 152 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~ 219 (260)
T PRK12823 152 ---------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQ-QIVDQT--LD 219 (260)
T ss_pred ---------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHH-HHHHHH--hc
Confidence 112776665433 34589999999999999731100 000000 000000 01
Q ss_pred CCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 202 GLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 202 ~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
+.|+. -+.+.+|+|+++++++.... ..|++|++.+|+
T Consensus 220 ~~~~~------------~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 220 SSLMK------------RYGTIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred cCCcc------------cCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 22221 12357889999888775432 358999997765
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.5e-12 Score=115.05 Aligned_cols=202 Identities=8% Similarity=-0.042 Sum_probs=126.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
.||++|+++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 16 ~iG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~~~~-~id~vi~ 87 (252)
T PRK06138 16 GIGRATAKLFAR------EGARVVVADRDAEAAERVAAAIAAGGRAF-ARQGDVGSAEAVEALVDFVAARWG-RLDVLVN 87 (252)
T ss_pred hHHHHHHHHHHH------CCCeEEEecCCHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 489999999999 899999999875321 00124578 8999999999988877643 2 2899999
Q ss_pred eeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... + .+..+++|+.++.++.+++...++.. +.++|+++||...+...
T Consensus 88 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~~~------------------- 147 (252)
T PRK06138 88 NAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTASQLALAGG------------------- 147 (252)
T ss_pred CCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECChhhccCC-------------------
Confidence 9985321 2 23468999999988887765432211 46799999886432110
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+ ....|+.+|...+ ...+++++++||+.++++...+.+.............. ...
T Consensus 148 -----~-~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~~-------- 212 (252)
T PRK06138 148 -----R-GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALR-ARH-------- 212 (252)
T ss_pred -----C-CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHH-hcC--------
Confidence 0 1223776665433 23589999999999998753221100000000000000 000
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCCC--CCCceeccCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDRA--KNQAFNCTNG 249 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~~--~g~~yni~~g 249 (360)
....+++.+|+|+++++++..+.. .|+.+.+.+|
T Consensus 213 ----~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 213 ----PMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred ----CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 112356789999999988765432 4788877655
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-11 Score=112.84 Aligned_cols=206 Identities=15% Similarity=0.117 Sum_probs=128.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~ 76 (360)
.||++++++|.+ +|++|++++|+.... ...++. ++.+|++|++++.++++.+ . ++|+|+|+|+...
T Consensus 20 gIG~~ia~~l~~------~G~~v~~~~r~~~~~--~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~ 89 (260)
T PRK06523 20 GIGAATVARLLE------AGARVVTTARSRPDD--LPEGVE-FVAADLTTAEGCAAVARAVLERLG-GVDILVHVLGGSS 89 (260)
T ss_pred chhHHHHHHHHH------CCCEEEEEeCChhhh--cCCcee-EEecCCCCHHHHHHHHHHHHHHcC-CCCEEEECCcccc
Confidence 389999999998 899999999976442 134678 9999999999877655432 2 2799999998421
Q ss_pred -----------CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 77 -----------KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 77 -----------~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
.+.+..+++|+.|+.++++++...++.. +..+||++||...+.. ..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~~-----------------~~----- 146 (260)
T PRK06523 90 APAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-GSGVIIHVTSIQRRLP-----------------LP----- 146 (260)
T ss_pred cCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEecccccCC-----------------CC-----
Confidence 1245578999999998888776543211 3468999988754321 00
Q ss_pred CCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHH-----HHHHH-HHHHh-hcCCCeeee
Q 037566 146 LPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLL-----TLAVY-ATICR-HQGLPFRYL 208 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~-----~~~~~-~~~~~-~~~~~~~~~ 208 (360)
.+...|+.+|...+ ...++.+.+++|+.|.+|.......... ....+ ..+.+ ..+.|+
T Consensus 147 --~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--- 221 (260)
T PRK06523 147 --ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL--- 221 (260)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc---
Confidence 01234777665433 2468999999999998874211000000 00000 00000 011111
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
.-+...+|+|+++.+++..+ ...|+.+.+.+|...|
T Consensus 222 ---------~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 222 ---------GRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred ---------CCCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence 12346788999988887542 3348899887776443
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.2e-12 Score=115.11 Aligned_cols=203 Identities=12% Similarity=0.070 Sum_probs=132.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccCC---CCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h 70 (360)
.||++++++|++ +|++|++++|++... .. ...++. ++.+|++|.+++.++++++. ..+|+|||
T Consensus 21 ~iG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~ 93 (255)
T PRK07523 21 GIGYALAEGLAQ------AGAEVILNGRDPAKLAAAAESLKGQGLSAH-ALAFDVTDHDAVRAAIDAFEAEIGPIDILVN 93 (255)
T ss_pred hHHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHhcCceEE-EEEccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 389999999999 899999999875321 00 123477 89999999999888776531 02799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.++.++++++.+.++. .+.++||++||...+.. .
T Consensus 94 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~~-----------------~-- 153 (255)
T PRK07523 94 NAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIA-RGAGKIINIASVQSALA-----------------R-- 153 (255)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-hCCeEEEEEccchhccC-----------------C--
Confidence 9985321 12456789999999999999765321 14578999988643210 0
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+ ..+.|+.+|...+ ...|+++.++||+.+.++......... .....+. ...|+
T Consensus 154 -----~-~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~---~~~~~~~--~~~~~------ 216 (255)
T PRK07523 154 -----P-GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADP---EFSAWLE--KRTPA------ 216 (255)
T ss_pred -----C-CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCH---HHHHHHH--hcCCC------
Confidence 0 1334777665433 356899999999999987432111100 0111111 11221
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 253 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s 253 (360)
..+..++|+|+++++++..+. ..|+.+++.+|..+|
T Consensus 217 ------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 217 ------GRWGKVEELVGACVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred ------CCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence 234568899999988875432 248999998876544
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.9e-12 Score=113.55 Aligned_cols=200 Identities=13% Similarity=0.085 Sum_probs=130.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++++++|++ +|++|++++++.... . ....++. ++.+|++|.+++.++++++ . .+|+|
T Consensus 20 giG~~la~~l~~------~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~~~-~iD~v 91 (258)
T PRK09134 20 RIGRAIALDLAA------HGFDVAVHYNRSRDEAEALAAEIRALGRRAV-ALQADLADEAEVRALVARASAALG-PITLL 91 (258)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 489999999998 899998887753211 0 0134578 8999999999888877643 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||+|+.... +.+.++++|+.|+.++++++...++.. +-.++|++||...+..
T Consensus 92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~~s~~~~~~------------------ 152 (258)
T PRK09134 92 VNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD-ARGLVVNMIDQRVWNL------------------ 152 (258)
T ss_pred EECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCceEEEECchhhcCC------------------
Confidence 999984221 234578999999999999987653211 2346777766433220
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.| ....|+.+|...+ ...++.++.++|+.++...... .. .+.... ...+ .|
T Consensus 153 ------~p-~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~-~~------~~~~~~--~~~~---~~- 212 (258)
T PRK09134 153 ------NP-DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS-PE------DFARQH--AATP---LG- 212 (258)
T ss_pred ------CC-CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC-hH------HHHHHH--hcCC---CC-
Confidence 01 1234888886444 1234899999998886543211 11 111111 1111 11
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHH
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWK 255 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~ 255 (360)
...+++|+|++++.++.++...|+.|++.+|..++|.
T Consensus 213 --------~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 213 --------RGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred --------CCcCHHHHHHHHHHHhcCCCcCCCEEEECCCeecccc
Confidence 1356889999999998877667999999888877664
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.9e-11 Score=114.33 Aligned_cols=198 Identities=11% Similarity=0.019 Sum_probs=130.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
.||++++++|++ +|++|++..++.... .. ...++. ++.+|++|++++.++++.+ . ++|+
T Consensus 66 gIG~~~a~~l~~------~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~ 137 (300)
T PRK06128 66 GIGRATAIAFAR------EGADIALNYLPEEEQDAAEVVQLIQAEGRKAV-ALPGDLKDEAFCRQLVERAVKELG-GLDI 137 (300)
T ss_pred cHHHHHHHHHHH------cCCEEEEEeCCcchHHHHHHHHHHHHcCCeEE-EEecCCCCHHHHHHHHHHHHHHhC-CCCE
Confidence 489999999999 899998876643210 00 123567 8999999999887776543 2 2899
Q ss_pred EEEeeeecC--C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 68 LFWVMFQRL--K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 68 V~h~A~~~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|||+|+... . +.+..+++|+.|+.++++++...++ .-.+||++||...|...
T Consensus 138 lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~~~iv~~sS~~~~~~~--------------- 199 (300)
T PRK06128 138 LVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLP---PGASIINTGSIQSYQPS--------------- 199 (300)
T ss_pred EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcC---cCCEEEEECCccccCCC---------------
Confidence 999998521 1 2345789999999999999987532 12489999998766421
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCc-chhHHHHHHHHHHHhhcCCCee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSL-NNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
+ ....|+.+|...+ ...|+.+.+++|+.|++|..... ... ..+ ..+. ...|+
T Consensus 200 ---------~-~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~-~~~---~~~~--~~~p~- 262 (300)
T PRK06128 200 ---------P-TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPP-EKI---PDFG--SETPM- 262 (300)
T ss_pred ---------C-CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCH-HHH---HHHh--cCCCC-
Confidence 0 0223777765433 34689999999999999853211 110 000 0010 11121
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 252 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~ 252 (360)
..+.+.+|+|.++++++.... ..|++|+|.+|..+
T Consensus 263 -----------~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 263 -----------KRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred -----------CCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence 234568889998888765432 24899999888654
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.7e-12 Score=118.37 Aligned_cols=206 Identities=11% Similarity=0.025 Sum_probs=128.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--C---C--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--W---F--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~---~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++|+++|++ +|++|++++|++... . . ...++. ++.+|++|++++.++++.+ .. +|+|+
T Consensus 16 ~IG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~-~d~vi 87 (258)
T PRK07890 16 GLGRTLAVRAAR------AGADVVLAARTAERLDEVAAEIDDLGRRAL-AVPTDITDEDQCANLVALALERFGR-VDALV 87 (258)
T ss_pred cHHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHHhCCceE-EEecCCCCHHHHHHHHHHHHHHcCC-ccEEE
Confidence 489999999999 999999999875321 0 0 124578 9999999999887777543 32 79999
Q ss_pred EeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+.... +....+++|+.|+.++++++.+.++. ...+||++||...+.. .
T Consensus 88 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~ii~~sS~~~~~~-----------------~ 148 (258)
T PRK07890 88 NNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAE--SGGSIVMINSMVLRHS-----------------Q 148 (258)
T ss_pred ECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh--CCCEEEEEechhhccC-----------------C
Confidence 99974211 23457899999999999999764321 1258999988654321 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee-ee
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR-YL 208 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 208 (360)
+ +...|+.+|...+ ...+++++++||+.++||........ ..+..+.+.. ..
T Consensus 149 -------~-~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~---------~~~~~~~~~~~~~ 211 (258)
T PRK07890 149 -------P-KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRH---------QAGKYGVTVEQIY 211 (258)
T ss_pred -------C-CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhh---------cccccCCCHHHHH
Confidence 0 1223666654433 23589999999999999853221100 0000000000 00
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
...........+.+++|+|+++++++... ...|+++.+..|.
T Consensus 212 ~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~ 255 (258)
T PRK07890 212 AETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE 255 (258)
T ss_pred HHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence 00000012234677899999998877532 2347777665554
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.4e-12 Score=113.98 Aligned_cols=202 Identities=12% Similarity=0.065 Sum_probs=126.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccCC---CCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~ 69 (360)
||++++++|++ +|++|++++|++... ......+. ++.+|++|++++.++++++. .++|+|+
T Consensus 16 iG~~~a~~l~~------~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi 88 (256)
T PRK09186 16 IGSALVKAILE------AGGIVIAADIDKEALNELLESLGKEFKSKKLS-LVELDITDQESLEEFLSKSAEKYGKIDGAV 88 (256)
T ss_pred HHHHHHHHHHH------CCCEEEEEecChHHHHHHHHHHHhhcCCCcee-EEEecCCCHHHHHHHHHHHHHHcCCccEEE
Confidence 89999999999 899999999875331 01123466 78999999999888776431 1279999
Q ss_pred EeeeecC---------C---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 70 WVMFQRL---------K---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 70 h~A~~~~---------~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+|+... . .....+++|+.++.++++++...++ ..+.++||++||...+..+ ..
T Consensus 89 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~~-------------~~ 154 (256)
T PRK09186 89 NCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFK-KQGGGNLVNISSIYGVVAP-------------KF 154 (256)
T ss_pred ECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHH-hcCCceEEEEechhhhccc-------------cc
Confidence 9996321 0 1345678899888888777765432 1245799999986544321 11
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
...|..+... ...|+.+|...+ ...++.+++++|+.++++.. ... .... + ...+
T Consensus 155 ~~~~~~~~~~--~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~---~~~------~~~~-~-~~~~--- 218 (256)
T PRK09186 155 EIYEGTSMTS--PVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP---EAF------LNAY-K-KCCN--- 218 (256)
T ss_pred hhccccccCC--cchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC---HHH------HHHH-H-hcCC---
Confidence 1223332211 224777775433 34689999999998876431 111 0011 1 0111
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
. ..+++.+|+|+++++++.... ..|+.+++.+|
T Consensus 219 -~--------~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 219 -G--------KGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred -c--------cCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence 1 135678899999998875432 24787777665
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.2e-12 Score=114.08 Aligned_cols=199 Identities=9% Similarity=0.031 Sum_probs=128.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEE-ecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGT-ARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l-~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|+++ +|+.... . ....++. ++.+|++|++++.++++++ . ++|+||
T Consensus 16 iG~~~a~~l~~------~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi 87 (250)
T PRK08063 16 IGKAIALRLAE------EGYDIAVNYARSRKAAEETAEEIEALGRKAL-AVKANVGDVEKIKEMFAQIDEEFG-RLDVFV 87 (250)
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 89998764 5543211 0 0124578 8999999999988887754 2 279999
Q ss_pred EeeeecCC------Ch---hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK------SE---EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +. ...+++|+.++.++++++.+.++.. +.++||++||...+.. .
T Consensus 88 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~-----------------~- 148 (250)
T PRK08063 88 NNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV-GGGKIISLSSLGSIRY-----------------L- 148 (250)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEEcchhhccC-----------------C-
Confidence 99984321 11 2357899999999999998653211 4569999998643321 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ +...|+.+|...+ ...++.+++++|+.+..+.......... +..... ...+
T Consensus 149 ------~-~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~---~~~~~~--~~~~------ 210 (250)
T PRK08063 149 ------E-NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREE---LLEDAR--AKTP------ 210 (250)
T ss_pred ------C-CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchH---HHHHHh--cCCC------
Confidence 0 1234777776554 2368999999999998764321111100 000010 0111
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
...+++.+|+|+++++++..+. ..|+.|++.+|..
T Consensus 211 ------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 211 ------AGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred ------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence 1135778999999998876543 2489998877754
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.1e-12 Score=116.01 Aligned_cols=205 Identities=12% Similarity=0.050 Sum_probs=130.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC----CCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF----PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~----~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
.||++++++|++ +|++|++++|+.... .. ....+. ++.+|++|.+++.++++.+ . ++|.
T Consensus 13 ~IG~~la~~l~~------~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~~-~id~ 84 (259)
T PRK12384 13 TLGAFLCHGLAE------EGYRVAVADINSEKAANVAQEINAEYGEGMAY-GFGADATSEQSVLALSRGVDEIFG-RVDL 84 (259)
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHHhcCCceeE-EEEccCCCHHHHHHHHHHHHHHcC-CCCE
Confidence 389999999999 899999999875321 00 013578 9999999999888777643 2 2799
Q ss_pred EEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCc-cccccccCCcccCCcCCCC
Q 037566 68 LFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTK-HYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 68 V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~-vYg~~~~~~~~~g~~~~~~ 136 (360)
|+|+|+.... +.+..+++|+.|+.++++++.+.++.. + -.++|++||.+ .||.+
T Consensus 85 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~~iv~~ss~~~~~~~~-------------- 149 (259)
T PRK12384 85 LVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRD-GIQGRIIQINSKSGKVGSK-------------- 149 (259)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhC-CCCcEEEEecCcccccCCC--------------
Confidence 9999984221 234567999999999998887643211 3 24889887753 22210
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCe-
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPF- 205 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~- 205 (360)
....|+.+|...+ ...|+++.++||+.++++.... ... ..+. +..+.+.
T Consensus 150 ------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~~---~~~~---~~~~~~~~ 209 (259)
T PRK12384 150 ------------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SLL---PQYA---KKLGIKPD 209 (259)
T ss_pred ------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hhh---HHHH---HhcCCChH
Confidence 1223777665432 3578999999999998764211 110 1110 0011000
Q ss_pred ---eeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 206 ---RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 206 ---~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
...++. .....+++.+|+++++++++.+.. ..|++||+.+|+.
T Consensus 210 ~~~~~~~~~---~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 210 EVEQYYIDK---VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred HHHHHHHHh---CcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence 000111 133567789999999987765432 3589999988764
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.9e-11 Score=110.34 Aligned_cols=196 Identities=14% Similarity=0.080 Sum_probs=124.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------C-CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------W-FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~-~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++|++.|++ +|++|+++.|++... . ....++. ++.+|++|.+++.++++.+ . ++|+|
T Consensus 16 ~iG~~l~~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~v 87 (248)
T PRK05557 16 GIGRAIAERLAA------QGANVVINYASSEAGAEALVAEIGALGGKAL-AVQGDVSDAESVERAVDEAKAEFG-GVDIL 87 (248)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCchhHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 379999999999 899998888865421 0 1134677 8999999999988877643 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc-cccccccCCcccCCcCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK-HYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~-vYg~~~~~~~~~g~~~~~~~p 138 (360)
+|+|+.... ..+..+.+|+.++.++++++...++ ..+.++||++||.. +||.+
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~iss~~~~~~~~---------------- 150 (248)
T PRK05557 88 VNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMM-KQRSGRIINISSVVGLMGNP---------------- 150 (248)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEEcccccCcCCC----------------
Confidence 999985321 2335678999999999999976421 12456899998853 23210
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
....|+.+|...+ ...++.++++||+.+.++......... .... . ...+
T Consensus 151 ----------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~-----~~~~-~-~~~~---- 209 (248)
T PRK05557 151 ----------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDV-----KEAI-L-AQIP---- 209 (248)
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHH-----HHHH-H-hcCC----
Confidence 0122555553222 345899999999887654322211110 0000 0 1111
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGD 250 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~ 250 (360)
...+.+.+|+++++.+++.. ....|+.|+|.+|.
T Consensus 210 --------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 210 --------LGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGGM 245 (248)
T ss_pred --------CCCCcCHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence 11245788899998877654 33458999998664
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2e-11 Score=110.51 Aligned_cols=195 Identities=13% Similarity=0.042 Sum_probs=125.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCc
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEV 65 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v 65 (360)
.||++|+++|++ +|++|++++|..... . .....++ ++.+|++|.+++.++++.+ . ++
T Consensus 17 ~iG~~la~~l~~------~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~~ 88 (249)
T PRK12827 17 GLGRAIAVRLAA------DGADVIVLDIHPMRGRAEADAVAAGIEAAGGKAL-GLAFDVRDFAATRAALDAGVEEFG-RL 88 (249)
T ss_pred hHHHHHHHHHHH------CCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHhC-CC
Confidence 489999999999 899999987643211 0 0124678 8999999999888877532 2 27
Q ss_pred cEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHH-hhccCCCCccEEEEeccCccccccccCCcccCCcCCC
Q 037566 66 THLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVV-DSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 66 ~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~-~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
|.|+|+|+.... +....+++|+.++.++++++. ..++ ..+.++||++||...|...
T Consensus 89 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~iv~~sS~~~~~~~------------- 154 (249)
T PRK12827 89 DILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR-ARRGGRIVNIASVAGVRGN------------- 154 (249)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCCCeEEEEECCchhcCCC-------------
Confidence 999999985321 234567999999999999997 2111 1156789999987654310
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCe
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (360)
.+...|+.+|...+ ...+++++++||+.++++........ . .+.+ ..+.
T Consensus 155 ------------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~------~-~~~~--~~~~ 213 (249)
T PRK12827 155 ------------RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT------E-HLLN--PVPV 213 (249)
T ss_pred ------------CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH------H-HHHh--hCCC
Confidence 01223666664332 23589999999999999754322110 0 1111 1111
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..+.+.+|+|+++++++... ...|+.|++.+|.
T Consensus 214 ------------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 214 ------------QRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGGF 248 (249)
T ss_pred ------------cCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence 11345788998888776432 2347888886653
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.4e-12 Score=113.16 Aligned_cols=203 Identities=12% Similarity=0.027 Sum_probs=128.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccCC---CCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h 70 (360)
.||++++++|++ +|++|++++|+.... .. ...+++ ++.+|++|.+++.++++.+. .++|+|||
T Consensus 14 ~iG~~la~~l~~------~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~ 86 (250)
T TIGR03206 14 GIGGATCRRFAE------EGAKVAVFDLNREAAEKVAADIRAKGGNAQ-AFACDITDRDSVDTAVAAAEQALGPVDVLVN 86 (250)
T ss_pred hHHHHHHHHHHH------CCCEEEEecCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 489999999999 899999999875321 00 124688 99999999998888776421 02799999
Q ss_pred eeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... + .+..+++|+.++.++++++...++.. +.++||++||...|+.. .
T Consensus 87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~iss~~~~~~~------------~------ 147 (250)
T TIGR03206 87 NAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASDAARVGS------------S------ 147 (250)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEECchhhccCC------------C------
Confidence 9974211 2 24568999999999999887533212 46789999998766421 0
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchh-HHHHHHHHHHHhhcCCCeeeeCC
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNS-LLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
....|+.+|...+ ...+++++++||+.++++........ ...-.+...+. ...+. |
T Consensus 148 -------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~- 214 (250)
T TIGR03206 148 -------GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFT--RAIPL---G- 214 (250)
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHH--hcCCc---c-
Confidence 0123777664322 23589999999999998742211000 00000000110 11111 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
.+...+|+|+++..++..+. ..|++|++.+|.
T Consensus 215 --------~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 215 --------RLGQPDDLPGAILFFSSDDASFITGQVLSVSGGL 248 (250)
T ss_pred --------CCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence 13346789999888775432 348999997663
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.4e-11 Score=110.13 Aligned_cols=199 Identities=12% Similarity=0.067 Sum_probs=124.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC--CCCCceeeEeeccCChHHHHHHHccCC---CCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF--PSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~ 69 (360)
.||++++++|++ +|+.|+...++.... .. ....+. ++.+|++|.+++.++++.+. .++|.|+
T Consensus 13 ~iG~~~a~~l~~------~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 85 (248)
T PRK06123 13 GIGAATALLAAE------RGYAVCLNYLRNRDAAEAVVQAIRRQGGEAL-AVAADVADEADVLRLFEAVDRELGRLDALV 85 (248)
T ss_pred hHHHHHHHHHHH------CCCeEEEecCCCHHHHHHHHHHHHhCCCcEE-EEEeccCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 489999999998 899987776543210 00 124577 89999999999888776431 0279999
Q ss_pred EeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCC--CCccEEEEeccCcc-ccccccCCcccCCcCCCC
Q 037566 70 WVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGR--SRLRHVTLLMGTKH-YMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 70 h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~--~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~~~~ 136 (360)
|+|+.... +.+..+++|+.++.++++++.+.++.. ..-.+||++||.+. |+.+ .
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------------~ 152 (248)
T PRK06123 86 NNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP-------------G 152 (248)
T ss_pred ECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC-------------C
Confidence 99985321 123568999999999999987643100 01236899888643 3211 0
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
....|+.+|...+ ...+++++++||++|+||........ . ....+ + ...|+.
T Consensus 153 ------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~-~---~~~~~-~-~~~p~~ 214 (248)
T PRK06123 153 ------------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEP-G---RVDRV-K-AGIPMG 214 (248)
T ss_pred ------------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCH-H---HHHHH-H-hcCCCC
Confidence 0012666665433 34589999999999999853221110 0 11111 1 122221
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
. ..+++|+++++++++.... ..|+.|++.+|
T Consensus 215 ~------------~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 215 R------------GGTAEEVARAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred C------------CcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence 1 1257889999988775432 35899999765
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.3e-11 Score=108.22 Aligned_cols=196 Identities=15% Similarity=0.085 Sum_probs=126.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCC--CccEEEEeeeecCC-
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQ--EVTHLFWVMFQRLK- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~--~v~~V~h~A~~~~~- 77 (360)
.||++++++|++ +|++|++++|++... ...+ ++.+|++|.+++.++++.+.. ++|+|+|+|+....
T Consensus 14 ~iG~~ia~~l~~------~G~~v~~~~r~~~~~----~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~ 82 (234)
T PRK07577 14 GIGLALSLRLAN------LGHQVIGIARSAIDD----FPGE-LFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQ 82 (234)
T ss_pred cHHHHHHHHHHH------CCCEEEEEeCCcccc----cCce-EEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCC
Confidence 379999999999 899999999976542 1236 899999999988776653200 26999999985321
Q ss_pred --------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 78 --------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 78 --------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
+....+++|+.++.++++++...++. .+..+||++||...|+.+ .
T Consensus 83 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~~sS~~~~~~~--------------------------~ 135 (234)
T PRK07577 83 PLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKL-REQGRIVNICSRAIFGAL--------------------------D 135 (234)
T ss_pred ChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCcEEEEEccccccCCC--------------------------C
Confidence 23346889999999998887654321 246799999988666421 0
Q ss_pred CCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 150 NFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 150 ~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
...|+.+|...+ ...++.++++||+.+..+...+..+... .....+. ...+ ...
T Consensus 136 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~--~~~~~~~--~~~~------------~~~ 199 (234)
T PRK07577 136 RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGS--EEEKRVL--ASIP------------MRR 199 (234)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccch--hHHHHHh--hcCC------------CCC
Confidence 223776665433 3468999999999998764322111000 0000000 0111 112
Q ss_pred ccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 220 MSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
....+|+|++++.++..+. ..|+.+++.+|.
T Consensus 200 ~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 200 LGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGG 232 (234)
T ss_pred CcCHHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence 3467889999988875432 348888886654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.7e-11 Score=109.79 Aligned_cols=202 Identities=10% Similarity=0.034 Sum_probs=127.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC-CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF-PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~-~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
.||++|+++|++ +|++|++++|++... .. ...++. ++.+|+.|++++.++++++ . .+|+|||
T Consensus 16 ~iG~~l~~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~ 87 (251)
T PRK07231 16 GIGEGIARRFAA------EGARVVVTDRNEEAAERVAAEILAGGRAI-AVAADVSDEADVEAAVAAALERFG-SVDILVN 87 (251)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHhC-CCCEEEE
Confidence 389999999999 899999999986431 00 124577 8999999999998877653 2 2799999
Q ss_pred eeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+.... +.+..+++|+.|+.++++++...++ ..+.++||++||...++..
T Consensus 88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~------------------ 148 (251)
T PRK07231 88 NAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMR-GEGGGAIVNVASTAGLRPR------------------ 148 (251)
T ss_pred CCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCcEEEEEcChhhcCCC------------------
Confidence 9985211 2345789999999888888775422 1246789999987655310
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ +...|+.+|...+ ...++++++++|+.+.++...........-.. ..+. .+.+
T Consensus 149 ------~-~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~-~~~~--~~~~------ 212 (251)
T PRK07231 149 ------P-GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENR-AKFL--ATIP------ 212 (251)
T ss_pred ------C-CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHH-HHHh--cCCC------
Confidence 0 1223666554322 23489999999999866532111100000000 0000 1111
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
...+.+++|+|+++++++..+. ..|+.+.+.+|..
T Consensus 213 ------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~ 249 (251)
T PRK07231 213 ------LGRLGTPEDIANAALFLASDEASWITGVTLVVDGGRC 249 (251)
T ss_pred ------CCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCCcc
Confidence 1235689999999999886433 2377777765543
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.8e-11 Score=109.61 Aligned_cols=198 Identities=12% Similarity=0.071 Sum_probs=129.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
.||++++++|++ +|++|++++|++.... . ...+++ ++.+|++|++++.++++.... +|+++|.|+.
T Consensus 8 ~iG~~~a~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~-id~li~~ag~ 79 (230)
T PRK07041 8 GIGLALARAFAA------EGARVTIASRSRDRLAAAARALGGGAPVR-TAALDITDEAAVDAFFAEAGP-FDHVVITAAD 79 (230)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHhcCC-CCEEEECCCC
Confidence 379999999999 8999999999743210 0 124678 899999999999999987653 8999999985
Q ss_pred cCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 75 RLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 75 ~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
... +.+..+++|+.++.+++++.... +..+||++||...|...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~g~iv~~ss~~~~~~~----------------------- 131 (230)
T PRK07041 80 TPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-----PGGSLTFVSGFAAVRPS----------------------- 131 (230)
T ss_pred CCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-----CCeEEEEECchhhcCCC-----------------------
Confidence 221 24567899999999999965443 46799999987655310
Q ss_pred CCCCCCcHHHHHHHHh--------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 146 LPFPNFYYAVEDIAAS--------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e--------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
| +.+.|+.+|...+ +..++.++.++|+.+-.+......... ......... ...+. +
T Consensus 132 -~-~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~-~~~~~~~~~--~~~~~---~-------- 195 (230)
T PRK07041 132 -A-SGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDA-REAMFAAAA--ERLPA---R-------- 195 (230)
T ss_pred -C-cchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccc-hHHHHHHHH--hcCCC---C--------
Confidence 0 1334777776544 223477888888877554211100000 000111110 11111 1
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCceeccCCCc
Q 037566 218 CDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDV 251 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~ 251 (360)
-+.+.+|+|+++++++..+...|+.|++.+|.+
T Consensus 196 -~~~~~~dva~~~~~l~~~~~~~G~~~~v~gg~~ 228 (230)
T PRK07041 196 -RVGQPEDVANAILFLAANGFTTGSTVLVDGGHA 228 (230)
T ss_pred -CCcCHHHHHHHHHHHhcCCCcCCcEEEeCCCee
Confidence 123578899999988875545589999988764
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-10 Score=106.83 Aligned_cols=210 Identities=14% Similarity=0.059 Sum_probs=146.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCCh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSE 79 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~ 79 (360)
++|++++++|++ +|++|+++.|++.... .. ..++ +..+|+.++.++..+++|+ +.++++......+.
T Consensus 11 ~~G~~~~~~L~~------~~~~v~~~~r~~~~~~~~~-~~v~-~~~~d~~~~~~l~~a~~G~----~~~~~i~~~~~~~~ 78 (275)
T COG0702 11 FVGGAVVRELLA------RGHEVRAAVRNPEAAAALA-GGVE-VVLGDLRDPKSLVAGAKGV----DGVLLISGLLDGSD 78 (275)
T ss_pred chHHHHHHHHHh------CCCEEEEEEeCHHHHHhhc-CCcE-EEEeccCCHhHHHHHhccc----cEEEEEeccccccc
Confidence 589999999999 8999999999875532 22 7899 9999999999999999994 78888876433222
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA 159 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l 159 (360)
...........+..+++. .+++++++.|+..+ ++.. .+.|..+|..
T Consensus 79 -~~~~~~~~~~~~~a~~a~------~~~~~~~~~s~~~~---------------------~~~~------~~~~~~~~~~ 124 (275)
T COG0702 79 -AFRAVQVTAVVRAAEAAG------AGVKHGVSLSVLGA---------------------DAAS------PSALARAKAA 124 (275)
T ss_pred -chhHHHHHHHHHHHHHhc------CCceEEEEeccCCC---------------------CCCC------ccHHHHHHHH
Confidence 344555555555555543 25788888765321 0111 1225666666
Q ss_pred Hh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcC
Q 037566 160 AS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATT 236 (360)
Q Consensus 160 ~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~ 236 (360)
.| ...+++++++||...|....... +.... ..+.+....+.+ ....+..+|+++++..++..
T Consensus 125 ~e~~l~~sg~~~t~lr~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~~-----~~~~i~~~d~a~~~~~~l~~ 189 (275)
T COG0702 125 VEAALRSSGIPYTTLRRAAFYLGAGAAF--------IEAAE--AAGLPVIPRGIG-----RLSPIAVDDVAEALAAALDA 189 (275)
T ss_pred HHHHHHhcCCCeEEEecCeeeeccchhH--------HHHHH--hhCCceecCCCC-----ceeeeEHHHHHHHHHHHhcC
Confidence 55 56799999999877776432111 00111 234443333332 35678899999988888777
Q ss_pred CCCCCCceeccCCCcccHHHHHHHHHHHhCCCccC
Q 037566 237 DRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVP 271 (360)
Q Consensus 237 ~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~ 271 (360)
+...+++|.++..+..+..|+...+....|.+...
T Consensus 190 ~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 190 PATAGRTYELAGPEALTLAELASGLDYTIGRPVGL 224 (275)
T ss_pred CcccCcEEEccCCceecHHHHHHHHHHHhCCccee
Confidence 66678999999999999999999999999987663
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.9e-11 Score=126.77 Aligned_cols=207 Identities=11% Similarity=0.034 Sum_probs=134.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC-CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF-PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~-~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||++++++|++ +|++|++++|++... .. ...++. ++.+|++|++++.++++.+ . ++|+|||+
T Consensus 434 IG~~la~~L~~------~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~-~v~~Dvtd~~~v~~~~~~~~~~~g-~iDvvI~~ 505 (681)
T PRK08324 434 IGKATAKRLAA------EGACVVLADLDEEAAEAAAAELGGPDRAL-GVACDVTDEAAVQAAFEEAALAFG-GVDIVVSN 505 (681)
T ss_pred HHHHHHHHHHH------CcCEEEEEeCCHHHHHHHHHHHhccCcEE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEEC
Confidence 79999999998 899999999975431 01 113678 8999999999888777642 2 27999999
Q ss_pred eeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCc-cEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 72 MFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRL-RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 72 A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v-~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
|+.... .....+++|+.|+.++++++.+.++.. +. .+||++||...+.. .
T Consensus 506 AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~~g~iV~vsS~~~~~~--------------~----- 565 (681)
T PRK08324 506 AGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ-GLGGSIVFIASKNAVNP--------------G----- 565 (681)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCcEEEEECCccccCC--------------C-----
Confidence 984321 234578999999999998886543211 22 68999988654321 0
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCee-ecCCCCcchhHHHHHHHHHHHhhcCCCee----
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIII-GASSRSLNNSLLTLAVYATICRHQGLPFR---- 206 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vy-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 206 (360)
+ ....|+.+|...+ ...++++.+++|+.|| |.+........ . .. +..+.+..
T Consensus 566 -----~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~----~-~~--~~~g~~~~~~~~ 632 (681)
T PRK08324 566 -----P-NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIE----A-RA--AAYGLSEEELEE 632 (681)
T ss_pred -----C-CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhh----h-hh--hhccCChHHHHH
Confidence 0 1234887776544 2357999999999999 65432111000 0 00 01111110
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHc--CCCCCCCceeccCCCcc
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAAT--TDRAKNQAFNCTNGDVF 252 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~--~~~~~g~~yni~~g~~~ 252 (360)
+.+.+. ...++++++|+|+++++++. .+...|++|||.+|...
T Consensus 633 ~~~~~~---~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~ 677 (681)
T PRK08324 633 FYRARN---LLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA 677 (681)
T ss_pred HHHhcC---CcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence 112221 34578999999999998873 34456899999888654
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-11 Score=118.68 Aligned_cols=241 Identities=17% Similarity=0.177 Sum_probs=148.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------C-------------C-CCCCceeeEeeccCChH------
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------W-------------F-PSSHVDHYITFDALDST------ 52 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~-------------~-~~~~v~~~v~gDl~d~~------ 52 (360)
|+|.-|++.||. ..+ .=-+|+.+.|.+... + + .-.++. .+.||+.+++
T Consensus 23 FlgKVliEklLr--~~p-~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~-pi~GDi~~~~LGis~~ 98 (467)
T KOG1221|consen 23 FLGKVLIEKLLR--TTP-DVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVV-PIAGDISEPDLGISES 98 (467)
T ss_pred hhHHHHHHHHHh--cCc-CcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecce-eccccccCcccCCChH
Confidence 678899999997 111 112688888865321 0 0 115677 8999999863
Q ss_pred HHHHHHccCCCCccEEEEeeeecC-C-ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccC
Q 037566 53 DTTQKLSSISQEVTHLFWVMFQRL-K-SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVG 130 (360)
Q Consensus 53 ~l~~~l~~~~~~v~~V~h~A~~~~-~-~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g 130 (360)
+++...+. |+.|||+|+... + .-.....+|+.||+++++-|++. ..++-++++|++ |-... .+
T Consensus 99 D~~~l~~e----V~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~----~~l~~~vhVSTA--y~n~~-----~~ 163 (467)
T KOG1221|consen 99 DLRTLADE----VNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEM----VKLKALVHVSTA--YSNCN-----VG 163 (467)
T ss_pred HHHHHHhc----CCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHh----hhhheEEEeehh--heecc-----cc
Confidence 34434444 789999998543 2 33456789999999999999985 479999999886 43211 11
Q ss_pred CcCCCCCCCCCCCCCC-----------------------CCCCCcHHHHHHHHh-----cCCCCcEEEEcCCCeeecCCC
Q 037566 131 QLIGHDPPFKEDSLRL-----------------------PFPNFYYAVEDIAAS-----YSPAVTYSVHRSSIIIGASSR 182 (360)
Q Consensus 131 ~~~~~~~p~~E~~p~~-----------------------p~p~~~Y~~ek~l~e-----~~~~~~~~ilRp~~vyGp~~~ 182 (360)
......-|..|+++.. ..|+. |.-+|.++| ...++|.+|+||+.|...-..
T Consensus 164 ~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNT-YtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~E 242 (467)
T KOG1221|consen 164 HIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNT-YTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKE 242 (467)
T ss_pred cccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCc-eeehHhhHHHHHHhhccCCCeEEEcCCceeccccC
Confidence 1101111222211110 12444 455677777 567899999999999876432
Q ss_pred Ccc----hhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHc-CCCCC----CCceeccCCC--c
Q 037566 183 SLN----NSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAAT-TDRAK----NQAFNCTNGD--V 251 (360)
Q Consensus 183 ~~~----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~-~~~~~----g~~yni~~g~--~ 251 (360)
... +.-.+.++.... ..|.--.+.+|.. ++.|++-+|.++.+++.++- +.... -.+||+++++ +
T Consensus 243 P~pGWidn~~gp~g~i~g~--gkGvlr~~~~d~~---~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np 317 (467)
T KOG1221|consen 243 PFPGWIDNLNGPDGVIIGY--GKGVLRCFLVDPK---AVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNP 317 (467)
T ss_pred CCCCccccCCCCceEEEEe--ccceEEEEEEccc---cccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCc
Confidence 111 110111110000 1122222344544 78899999999999996652 11122 3499999875 7
Q ss_pred ccHHHHHHHHHHHhC
Q 037566 252 FTWKSLWKLLSEIFD 266 (360)
Q Consensus 252 ~s~~el~~~ia~~~g 266 (360)
++|.++.+...+.+-
T Consensus 318 ~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 318 VTWGDFIELALRYFE 332 (467)
T ss_pred ccHHHHHHHHHHhcc
Confidence 999999998888875
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.5e-11 Score=111.63 Aligned_cols=199 Identities=12% Similarity=0.005 Sum_probs=122.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++|+++|++ +|++|++++|+.... .. ...++. ++.+|++|.+++.++++++ . ++|+||
T Consensus 17 gIG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~g-~id~vi 88 (287)
T PRK06194 17 GFGLAFARIGAA------LGMKLVLADVQQDALDRAVAELRAQGAEVL-GVRTDVSDAAQVEALADAALERFG-AVHLLF 88 (287)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCChHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 489999999999 899999999864321 00 123577 8999999999988877653 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCC-----ccEEEEeccCccccccccCCcccCCcCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSR-----LRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~-----v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
|+|+.... +.+..+++|+.|+.++++++...++.... ..++|++||...|...
T Consensus 89 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------- 155 (287)
T PRK06194 89 NNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP------------- 155 (287)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-------------
Confidence 99985321 22346899999999988885432210111 2589999887655310
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh-------c-----CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCC
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS-------Y-----SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGL 203 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e-------~-----~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~ 203 (360)
+ +...|+.+|...+ . ..++.+..+.|+.|..+ ... . ..+.
T Consensus 156 -----------~-~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~----~~~---------~---~~~~ 207 (287)
T PRK06194 156 -----------P-AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG----IWQ---------S---ERNR 207 (287)
T ss_pred -----------C-CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc----ccc---------c---cccC
Confidence 0 1234887776654 1 12344444554333221 100 0 1123
Q ss_pred CeeeeCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCC
Q 037566 204 PFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDV 267 (360)
Q Consensus 204 ~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~ 267 (360)
+..+.|++. ...++.+++|.+.+.+.. + .++..|+++.+.+.++.
T Consensus 208 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~-------~---------~~s~~dva~~i~~~~~~ 252 (287)
T PRK06194 208 PADLANTAP---PTRSQLIAQAMSQKAVGS-------G---------KVTAEEVAQLVFDAIRA 252 (287)
T ss_pred chhcccCcc---ccchhhHHHHHHHhhhhc-------c---------CCCHHHHHHHHHHHHHc
Confidence 444445544 456778888776543211 1 16889999999887753
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.5e-11 Score=107.83 Aligned_cols=196 Identities=10% Similarity=0.008 Sum_probs=126.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||.++++.|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+ . ++|+|||
T Consensus 17 iG~~~a~~l~~------~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~ 88 (253)
T PRK08217 17 LGRAMAEYLAQ------KGAKLALIDLNQEKLEEAVAECGALGTEVR-GYAANVTDEEDVEATFAQIAEDFG-QLNGLIN 88 (253)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 899999999875321 00134577 8999999998887766653 3 2799999
Q ss_pred eeeecCC------------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCc
Q 037566 71 VMFQRLK------------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQL 132 (360)
Q Consensus 71 ~A~~~~~------------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~ 132 (360)
+|+.... +...++++|+.|+.++++++...+.....-.+|+++||.+.||.+
T Consensus 89 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---------- 158 (253)
T PRK08217 89 NAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM---------- 158 (253)
T ss_pred CCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC----------
Confidence 9984211 123467899999998887765432101122468888887665421
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcC
Q 037566 133 IGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQG 202 (360)
Q Consensus 133 ~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~ 202 (360)
+...|+.+|...+ ...+++++.++|+.+.++......+.. .... . .+
T Consensus 159 ----------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~-----~~~~-~-~~ 215 (253)
T PRK08217 159 ----------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEA-----LERL-E-KM 215 (253)
T ss_pred ----------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHH-----HHHH-H-hc
Confidence 1223776665333 246899999999999887532221110 0001 0 11
Q ss_pred CCeeeeCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCC
Q 037566 203 LPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGD 250 (360)
Q Consensus 203 ~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~ 250 (360)
.+. ..+.+.+|+|+++..++......|++|++.+|-
T Consensus 216 ~~~------------~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 216 IPV------------GRLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred CCc------------CCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 121 124467889999988886544568999998764
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.9e-11 Score=110.65 Aligned_cols=159 Identities=14% Similarity=0.022 Sum_probs=105.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--C-CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--F-PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--~-~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
.||.+++++|++ +|++|++++|++.... . .-..++ ++.+|++|.++++++++.+ . ++|+|+|+|+
T Consensus 37 gIG~~~a~~L~~------~G~~Vv~~~R~~~~~~~~~~~l~~v~-~~~~Dl~d~~~v~~~~~~~~~~~~-~iD~li~nAg 108 (315)
T PRK06196 37 GLGLETTRALAQ------AGAHVIVPARRPDVAREALAGIDGVE-VVMLDLADLESVRAFAERFLDSGR-RIDILINNAG 108 (315)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhhhCe-EEEccCCCHHHHHHHHHHHHhcCC-CCCEEEECCC
Confidence 489999999999 8999999999754210 0 012478 9999999999988776532 2 2899999998
Q ss_pred ecCC-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 74 QRLK-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 74 ~~~~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
.... ..+..+++|+.|+.++++++...++.. +..|||++||...+.... .....++..+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~-----------~~~~~~~~~~~- 175 (315)
T PRK06196 109 VMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGHRRSPI-----------RWDDPHFTRGY- 175 (315)
T ss_pred CCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHhccCCC-----------CccccCccCCC-
Confidence 5321 245678999999877777665432211 346899999875432110 00000111111
Q ss_pred CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCC
Q 037566 147 PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASS 181 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~ 181 (360)
.+...|+.+|...+ ...|+.++++||+.|.++..
T Consensus 176 -~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 176 -DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ 219 (315)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence 12445888887544 34689999999999998753
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.3e-11 Score=108.21 Aligned_cols=200 Identities=12% Similarity=0.070 Sum_probs=122.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEe-cCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccCC---CCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTA-RRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~-r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~ 69 (360)
+||++++++|++ +|++|+++. |++... . ....++. ++.+|++|++++.++++++. .++|+|+
T Consensus 12 ~iG~~l~~~l~~------~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~i~~~~~~~~~~~~~id~vi 84 (247)
T PRK09730 12 GIGRATALLLAQ------EGYTVAVNYQQNLHAAQEVVNLITQAGGKAF-VLQADISDENQVVAMFTAIDQHDEPLAALV 84 (247)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCChHHHHHHHHHHHhCCCeEE-EEEccCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 489999999998 899998754 433211 0 0123577 89999999999988877542 1378999
Q ss_pred EeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccC--CCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 70 WVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKG--RSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 70 h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~--~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+|+.... +....+++|+.++.++++++...++. +....+||++||...+...
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~--------------- 149 (247)
T PRK09730 85 NNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA--------------- 149 (247)
T ss_pred ECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC---------------
Confidence 99984211 12357899999999888887653210 1123569999886543210
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
| .....|+.+|...+ ...+++++++||+.+|||......... ....+. ...|+.
T Consensus 150 ~---------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~----~~~~~~--~~~~~~- 213 (247)
T PRK09730 150 P---------GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPG----RVDRVK--SNIPMQ- 213 (247)
T ss_pred C---------CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHH----HHHHHH--hcCCCC-
Confidence 0 00112665554332 246899999999999998543211110 011111 122211
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
-..+.+|+|+++++++..+. ..|+.|++.+|
T Consensus 214 -----------~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 214 -----------RGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred -----------CCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence 11257889999888775432 44788877654
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.1e-10 Score=106.07 Aligned_cols=202 Identities=13% Similarity=0.044 Sum_probs=128.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~ 76 (360)
.||++++++|++ +|++|++++|+.... ...+++ ++.+|++|++++.++++++ . ++|+|+|+|+...
T Consensus 19 ~iG~~la~~l~~------~G~~v~~~~~~~~~~--~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~ 88 (252)
T PRK08220 19 GIGYAVALAFVE------AGAKVIGFDQAFLTQ--EDYPFA-TFVLDVSDAAAVAQVCQRLLAETG-PLDVLVNAAGILR 88 (252)
T ss_pred hHHHHHHHHHHH------CCCEEEEEecchhhh--cCCceE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCC
Confidence 389999999999 899999999976221 234678 8999999999988877653 2 2799999998522
Q ss_pred C---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 77 K---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 77 ~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
. +....+++|+.++.++++++...++.. +..+||++||..... +.
T Consensus 89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~ss~~~~~-----------------~~-------- 142 (252)
T PRK08220 89 MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-RSGAIVTVGSNAAHV-----------------PR-------- 142 (252)
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECCchhcc-----------------CC--------
Confidence 1 234578999999999999986543211 345899998864321 00
Q ss_pred CCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchh--HHHHHHHHHHHh-hcCCCeeeeCCcccc
Q 037566 148 FPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNS--LLTLAVYATICR-HQGLPFRYLGNKYTW 214 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~G~~~~~ 214 (360)
.+.+.|+.+|...+ ...++.+++++|+.|++|........ .....+...... ..+.
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 211 (252)
T PRK08220 143 IGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGI----------- 211 (252)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcC-----------
Confidence 01234776665443 23689999999999999853221100 000000000000 0011
Q ss_pred cccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
....+.+++|+|+++++++... ...|++..+.+|.
T Consensus 212 -~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~ 248 (252)
T PRK08220 212 -PLGKIARPQEIANAVLFLASDLASHITLQDIVVDGGA 248 (252)
T ss_pred -CCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence 1235678999999998887532 2347776665553
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.4e-11 Score=112.17 Aligned_cols=196 Identities=10% Similarity=0.015 Sum_probs=128.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++|+++|++ +|++|++++|+.... .. ...++. ++.+|++|.+++.++++.+ . .+|+|+
T Consensus 58 IG~~la~~l~~------~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~i~~~~~-~iD~lI 129 (290)
T PRK06701 58 IGRAVAVLFAK------EGADIAIVYLDEHEDANETKQRVEKEGVKCL-LIPGDVSDEAFCKDAVEETVRELG-RLDILV 129 (290)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcchHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 899999998875321 00 123577 8999999999887777642 2 279999
Q ss_pred EeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+.... +....+++|+.++.++++++...++ .-.+||++||.+.|... +
T Consensus 130 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~---~~g~iV~isS~~~~~~~---------------~- 190 (290)
T PRK06701 130 NNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK---QGSAIINTGSITGYEGN---------------E- 190 (290)
T ss_pred ECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh---hCCeEEEEecccccCCC---------------C-
Confidence 99985311 1245789999999999999987432 12589999998766421 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
....|+.+|...+ ...+++++.++|+.|+.+........ .... ... ...
T Consensus 191 ---------~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~-~~~~---~~~--~~~------ 249 (290)
T PRK06701 191 ---------TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDE-EKVS---QFG--SNT------ 249 (290)
T ss_pred ---------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCH-HHHH---HHH--hcC------
Confidence 0112666554332 23589999999999988743211110 0000 000 011
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
....+.+++|+|+++++++.... ..|++|++.+|..
T Consensus 250 ------~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~~ 287 (290)
T PRK06701 250 ------PMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGVI 287 (290)
T ss_pred ------CcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCcc
Confidence 11345678899999988876432 3589999977643
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.3e-11 Score=107.56 Aligned_cols=187 Identities=11% Similarity=0.037 Sum_probs=118.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
.||++++++|++ + ++|++++|++... .....+++ ++.+|++|.+++.+++++++. +|.|+|+|+....
T Consensus 14 ~iG~~l~~~l~~------~-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id~vi~~ag~~~~ 84 (227)
T PRK08219 14 GIGAAIARELAP------T-HTLLLGGRPAERLDELAAELPGAT-PFPVDLTDPEAIAAAVEQLGR-LDVLVHNAGVADL 84 (227)
T ss_pred HHHHHHHHHHHh------h-CCEEEEeCCHHHHHHHHHHhccce-EEecCCCCHHHHHHHHHhcCC-CCEEEECCCcCCC
Confidence 379999999998 8 9999999975431 00123578 999999999999999987643 8999999985321
Q ss_pred ------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+ ....+++|+.++.++.+++.+.++ .+.+++|++||...++.. .
T Consensus 85 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~v~~ss~~~~~~~-------------~------------ 137 (227)
T PRK08219 85 GPVAESTVDEWRATLEVNVVAPAELTRLLLPALR--AAHGHVVFINSGAGLRAN-------------P------------ 137 (227)
T ss_pred CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH--hCCCeEEEEcchHhcCcC-------------C------------
Confidence 1 234578999995555555433211 124689999987665421 0
Q ss_pred CCCcHHHHHHHHh--------cCCC-CcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 149 PNFYYAVEDIAAS--------YSPA-VTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 149 p~~~Y~~ek~l~e--------~~~~-~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
+...|+..|...+ ...+ +++..++|+.+.++.... +....+.. . ....
T Consensus 138 ~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~-------------~~~~~~~~--~--------~~~~ 194 (227)
T PRK08219 138 GWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRG-------------LVAQEGGE--Y--------DPER 194 (227)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhh-------------hhhhhccc--c--------CCCC
Confidence 0122555554322 2223 888888887665432111 00001111 1 1135
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCceecc
Q 037566 220 MSDSRVLAEQQIWAATTDRAKNQAFNCT 247 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~g~~yni~ 247 (360)
+++.+|+|++++.++.++ ..+.+||+.
T Consensus 195 ~~~~~dva~~~~~~l~~~-~~~~~~~~~ 221 (227)
T PRK08219 195 YLRPETVAKAVRFAVDAP-PDAHITEVV 221 (227)
T ss_pred CCCHHHHHHHHHHHHcCC-CCCccceEE
Confidence 688999999999888654 456788774
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.8e-11 Score=108.98 Aligned_cols=145 Identities=16% Similarity=0.033 Sum_probs=105.3
Q ss_pred CchHHHHHHHhcCCCCCCCCc-EEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee-cCC-
Q 037566 1 MAGLSLAEALKNNPTIPGGPW-KVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ-RLK- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~-~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~-~~~- 77 (360)
.||++++++|++ +|+ +|++++|++........+++ ++.+|+.|.+++.++++.... +|.|||+|+. ...
T Consensus 17 ~iG~~la~~l~~------~G~~~V~~~~r~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id~vi~~ag~~~~~~ 88 (238)
T PRK08264 17 GIGRAFVEQLLA------RGAAKVYAAARDPESVTDLGPRVV-PLQLDVTDPASVAAAAEAASD-VTILVNNAGIFRTGS 88 (238)
T ss_pred hHHHHHHHHHHH------CCcccEEEEecChhhhhhcCCceE-EEEecCCCHHHHHHHHHhcCC-CCEEEECCCcCCCCC
Confidence 379999999998 899 89999997644211235788 999999999999998887653 7999999986 211
Q ss_pred --------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 78 --------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 78 --------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
+....+++|+.++.++++++...++ ..+..+||++||...|... + +
T Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~~~~~~------------------------~-~ 142 (238)
T PRK08264 89 LLLEGDEDALRAEMETNYFGPLAMARAFAPVLA-ANGGGAIVNVLSVLSWVNF------------------------P-N 142 (238)
T ss_pred ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcChhhccCC------------------------C-C
Confidence 2345688999999999999864321 1145789999887654310 0 1
Q ss_pred CCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 150 NFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 150 ~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
...|+.+|...+ ...+++++++||+.+.++
T Consensus 143 ~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~ 182 (238)
T PRK08264 143 LGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTD 182 (238)
T ss_pred chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence 234776665544 235899999999988664
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-10 Score=106.53 Aligned_cols=205 Identities=11% Similarity=0.037 Sum_probs=130.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC------CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||++++++|++ +|++|++++|++.... ....++. ++.+|++|++++.++++++ . ++|+|||+
T Consensus 19 iG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ 90 (258)
T PRK08628 19 IGAAISLRLAE------EGAIPVIFGRSAPDDEFAEELRALQPRAE-FVQVDLTDDAQCRDAVEQTVAKFG-RIDGLVNN 90 (258)
T ss_pred HHHHHHHHHHH------cCCcEEEEcCChhhHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHhcC-CCCEEEEC
Confidence 79999999999 8999999998764310 0134678 9999999999988877643 2 27999999
Q ss_pred eeecCC--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 72 MFQRLK--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 72 A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
|+.... +.+..+++|+.++.++.+++...++ .+..+|+++||...+.. .
T Consensus 91 ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~iv~~ss~~~~~~--------------~------- 147 (258)
T PRK08628 91 AGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLK--ASRGAIVNISSKTALTG--------------Q------- 147 (258)
T ss_pred CcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhh--ccCcEEEEECCHHhccC--------------C-------
Confidence 984221 2345679999999999998875432 12368999988643311 0
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcch-hHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNN-SLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
.+...|+.+|...+ ...++.++.+||++|++|....... ..........+.+ .+++ +
T Consensus 148 ----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~-~--- 215 (258)
T PRK08628 148 ----GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITA----KIPL-G--- 215 (258)
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHh----cCCc-c---
Confidence 01334887775544 2468999999999999974221000 0000000000100 1111 1
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccHH
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWK 255 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~~ 255 (360)
..+++.+|+|+++++++... ...|+.|.+.+| ...++
T Consensus 216 -----~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg-~~~~~ 254 (258)
T PRK08628 216 -----HRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGG-YVHLD 254 (258)
T ss_pred -----ccCCCHHHHHHHHHHHhChhhccccCceEEecCC-ccccc
Confidence 13567899999999887643 234788877544 34444
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.9e-11 Score=106.33 Aligned_cols=197 Identities=11% Similarity=0.019 Sum_probs=127.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++|+++|++ +|++|++++|++... . ....+++ ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 19 iG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~ 90 (250)
T PRK12939 19 LGAAFAEALAE------AGATVAFNDGLAAEARELAAALEAAGGRAH-AIAADLADPASVQRFFDAAAAALG-GLDGLVN 90 (250)
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 899999998875321 0 0124578 8999999999988877643 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.++.++++++...++.. +-.+||++||...+...
T Consensus 91 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------- 150 (250)
T PRK12939 91 NAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS-GRGRIVNLASDTALWGA------------------- 150 (250)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEECchhhccCC-------------------
Confidence 9985321 233467899999999999987542111 23589999886543210
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+ ....|+.+|...+ ...++.+++++|+.+..+........ . ...... .+.
T Consensus 151 -----~-~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~-~---~~~~~~--~~~-------- 210 (250)
T PRK12939 151 -----P-KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPAD-E---RHAYYL--KGR-------- 210 (250)
T ss_pred -----C-CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCCh-H---HHHHHH--hcC--------
Confidence 0 1223666665443 24689999999998877643221110 0 000010 111
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
....+++.+|+|++++.++..+. ..|+.+++.+|.
T Consensus 211 ----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~ 247 (250)
T PRK12939 211 ----ALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGF 247 (250)
T ss_pred ----CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 11235678999999999876432 358888887764
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.2e-10 Score=107.58 Aligned_cols=207 Identities=10% Similarity=-0.077 Sum_probs=127.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||++++++|++ +|++|++++|+.... .....+++ ++.+|++|++++.++++.+ . ++|+|+|+
T Consensus 30 IG~~la~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~~g-~id~li~~ 101 (280)
T PLN02253 30 IGESIVRLFHK------HGAKVCIVDLQDDLGQNVCDSLGGEPNVC-FFHCDVTVEDDVSRAVDFTVDKFG-TLDIMVNN 101 (280)
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHhcCCCceE-EEEeecCCHHHHHHHHHHHHHHhC-CCCEEEEC
Confidence 89999999999 899999999864321 11124678 9999999999988877632 2 27999999
Q ss_pred eeecCC-----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc-ccccccCCcccCCcCCCCCCC
Q 037566 72 MFQRLK-----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH-YMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 72 A~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+.... +.+..+++|+.|+.++++++...++.. +-.+++++||... ++.+
T Consensus 102 Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~~~~----------------- 163 (280)
T PLN02253 102 AGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-KKGSIVSLCSVASAIGGL----------------- 163 (280)
T ss_pred CCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCceEEEecChhhcccCC-----------------
Confidence 985321 234678999999999999887542111 2246888876532 2210
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcc-hhHHHHHHHHHHHhh--cCCCee
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLN-NSLLTLAVYATICRH--QGLPFR 206 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~-~~~~~~~~~~~~~~~--~~~~~~ 206 (360)
. ...|+.+|...+ ...++.+..++|+.|..+...... +..........+... .+.++
T Consensus 164 --------~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 233 (280)
T PLN02253 164 --------G-PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL- 233 (280)
T ss_pred --------C-CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC-
Confidence 0 123777776544 245899999999999876321110 000000000000000 01110
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcccH
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFTW 254 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s~ 254 (360)
. ....+.+|+|+++++++..+. ..|+.+++.+|...+.
T Consensus 234 -~---------~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~ 273 (280)
T PLN02253 234 -K---------GVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTN 273 (280)
T ss_pred -c---------CCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence 0 123568999999998875332 2488898977754443
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.4e-10 Score=104.01 Aligned_cols=200 Identities=13% Similarity=0.076 Sum_probs=126.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~~ 77 (360)
||++++++|++ +|++|++++|+.... ....+++ ++.+|++|++++.++++.+ . .+|+|||+|+....
T Consensus 18 IG~~la~~l~~------~g~~v~~~~r~~~~~-~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~ 88 (252)
T PRK07856 18 IGAGIARAFLA------AGATVVVCGRRAPET-VDGRPAE-FHAADVRDPDQVAALVDAIVERHG-RLDVLVNNAGGSPY 88 (252)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChhhh-hcCCceE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCC
Confidence 79999999999 899999999976431 1134678 9999999999888877654 2 27999999984221
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.++.++++++...++...+..+||++||...+.. . +
T Consensus 89 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-----------------~-------~- 143 (252)
T PRK07856 89 ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP-----------------S-------P- 143 (252)
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC-----------------C-------C-
Confidence 23457899999999999998764321113468999988653321 0 0
Q ss_pred CCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 149 PNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 149 p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
..+.|+.+|...+ ....+.+..++|+.|..+......... ..+..+. ...|+ + -
T Consensus 144 ~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~---~~~~~~~--~~~~~---~---------~ 206 (252)
T PRK07856 144 GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDA---EGIAAVA--ATVPL---G---------R 206 (252)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCH---HHHHHHh--hcCCC---C---------C
Confidence 1234777665543 122388899999988765321111000 0011111 11121 1 2
Q ss_pred ccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 220 MSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
+...+++|+++++++... ...|+.+.+.+|...
T Consensus 207 ~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~ 241 (252)
T PRK07856 207 LATPADIAWACLFLASDLASYVSGANLEVHGGGER 241 (252)
T ss_pred CcCHHHHHHHHHHHcCcccCCccCCEEEECCCcch
Confidence 345788999988876532 234888888766544
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.6e-11 Score=112.31 Aligned_cols=165 Identities=15% Similarity=0.152 Sum_probs=108.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C-CCCCCceeeEeeccCChHHHHHHHccCC---CCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W-FPSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h 70 (360)
.||.+++++|++ +|++|++++|+.... . ....+++ ++.+|++|.+++.++++.+. ..+|+|+|
T Consensus 17 gIG~~~a~~L~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~ 89 (322)
T PRK07453 17 GVGLYAAKALAK------RGWHVIMACRNLKKAEAAAQELGIPPDSYT-IIHIDLGDLDSVRRFVDDFRALGKPLDALVC 89 (322)
T ss_pred hHHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhhccCCceE-EEEecCCCHHHHHHHHHHHHHhCCCccEEEE
Confidence 489999999999 899999999874321 0 1124678 89999999999888776421 12799999
Q ss_pred eeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCC-CccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 71 VMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRS-RLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 71 ~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~-~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+.... ..+..+++|+.|+.++++++...++... +..|||++||.++|.... .|.. +...+.
T Consensus 90 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~-----~~~~-~~~~~~ 163 (322)
T PRK07453 90 NAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKEL-----GGKI-PIPAPA 163 (322)
T ss_pred CCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCcccc-----CCcc-CCCCcc
Confidence 9985211 2345789999999999999876543121 235999999987764210 0100 000011
Q ss_pred C------------------CCCCCCCCCCCcHHHHHHHHh--------c---CCCCcEEEEcCCCeeecC
Q 037566 140 K------------------EDSLRLPFPNFYYAVEDIAAS--------Y---SPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 140 ~------------------E~~p~~p~p~~~Y~~ek~l~e--------~---~~~~~~~ilRp~~vyGp~ 180 (360)
+ +..+. .|...|+.+|+..+ + ..|+.++.+||++|+|..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 164 DLGDLSGFEAGFKAPISMADGKKF--KPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred chhhhhcchhcccccccccCccCC--CccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 1 11111 24556999997543 1 247999999999998743
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.9e-10 Score=104.54 Aligned_cols=154 Identities=12% Similarity=0.027 Sum_probs=98.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C----CCCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
.||++++++|++ +|++|++++|+.... . .....++ ++.+|++|.+++.++++.+ . ++|+
T Consensus 27 gIG~~~a~~l~~------~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~~-~iD~ 98 (306)
T PRK06197 27 GLGYETAAALAA------KGAHVVLAVRNLDKGKAAAARITAATPGADVT-LQELDLTSLASVRAAADALRAAYP-RIDL 98 (306)
T ss_pred cHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceE-EEECCCCCHHHHHHHHHHHHhhCC-CCCE
Confidence 489999999999 899999999874321 0 0124678 8999999999988776643 2 2799
Q ss_pred EEEeeeecC-------CChhHhhhhhHHH----HHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 68 LFWVMFQRL-------KSEEINISNNSTM----FKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 68 V~h~A~~~~-------~~~~~~~~vNv~g----t~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
|||+|+... +..+..+++|+.| |+.+++.+++. +..+||++||.+.+.... . ..
T Consensus 99 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----~~~~iV~vSS~~~~~~~~-----~-----~~ 163 (306)
T PRK06197 99 LINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-----PGSRVVTVSSGGHRIRAA-----I-----HF 163 (306)
T ss_pred EEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-----CCCEEEEECCHHHhccCC-----C-----Cc
Confidence 999998532 1334578999999 55555555443 357999999986543110 0 01
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEE--EEcCCCeeec
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYS--VHRSSIIIGA 179 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~--ilRp~~vyGp 179 (360)
....+..+. .+...|+.+|...+ ...+.+++ .+.|+.|..+
T Consensus 164 ~~~~~~~~~--~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 164 DDLQWERRY--NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred cccCcccCC--CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 111111121 23456998886544 23455544 4579888655
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.1e-10 Score=104.75 Aligned_cols=200 Identities=14% Similarity=0.080 Sum_probs=123.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 23 ~IG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~-~~~~Dl~d~~~i~~~~~~~~~~~~-~id~vi 94 (259)
T PRK08213 23 GLGLQIAEALGE------AGARVVLSARKAEELEEAAAHLEALGIDAL-WIAADVADEADIERLAEETLERFG-HVDILV 94 (259)
T ss_pred hHHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHHHHhC-CCCEEE
Confidence 489999999999 899999999875321 00124577 8999999999987666542 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhh-ccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDS-NKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~-~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+.... ..++.+++|+.++.++++++.+. ++ ..+..+||++||...+... + +
T Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~-~~~~~~~v~~sS~~~~~~~------------~--~- 158 (259)
T PRK08213 95 NNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMI-PRGYGRIINVASVAGLGGN------------P--P- 158 (259)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHH-hcCCeEEEEECChhhccCC------------C--c-
Confidence 99985311 22456789999999999988653 11 1246789999987655321 0 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
.. .+...|+.+|...+ ...++.+.+++|+.+-.+........ ....+. .+.++..
T Consensus 159 --~~----~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~-----~~~~~~--~~~~~~~-- 223 (259)
T PRK08213 159 --EV----MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLER-----LGEDLL--AHTPLGR-- 223 (259)
T ss_pred --cc----cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHH-----HHHHHH--hcCCCCC--
Confidence 00 01334777765544 24589999999987765432221111 011111 1223222
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
+...+++++...+++... ...|+.+++.+|
T Consensus 224 ----------~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 224 ----------LGDDEDLKGAALLLASDASKHITGQILAVDGG 255 (259)
T ss_pred ----------CcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 224667877777666432 234788877655
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.3e-10 Score=106.41 Aligned_cols=183 Identities=13% Similarity=0.018 Sum_probs=120.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|++... .....++. ++.+|++|.+++.++++.+ . ++|+|+
T Consensus 12 ~iG~~la~~l~~------~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi 83 (263)
T PRK06181 12 GIGRALAVRLAR------AGAQLVLAARNETRLASLAQELADHGGEAL-VVPTDVSDAEACERLIEAAVARFG-GIDILV 83 (263)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 379999999998 899999999875321 00134677 8999999999988877643 2 279999
Q ss_pred EeeeecCC-------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRLK-------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~~-------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+.... + ....+++|+.++.++++++...++ .+..++|++||...|+..
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~--~~~~~iv~~sS~~~~~~~----------------- 144 (263)
T PRK06181 84 NNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLK--ASRGQIVVVSSLAGLTGV----------------- 144 (263)
T ss_pred ECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH--hcCCEEEEEecccccCCC-----------------
Confidence 99984321 2 234589999999999999865321 134689999887655310
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ +...|+.+|...+ ...++.+++++|+.+..+....... ..+.+....+
T Consensus 145 -------~-~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~-------------~~~~~~~~~~ 203 (263)
T PRK06181 145 -------P-TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALD-------------GDGKPLGKSP 203 (263)
T ss_pred -------C-CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcc-------------cccccccccc
Confidence 0 1234777765433 2468999999998887643211100 0111111111
Q ss_pred CcccccccccccCHHHHHHHHHHHHcC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATT 236 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~ 236 (360)
. ...++++++|+|++++.++..
T Consensus 204 ~-----~~~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 204 M-----QESKIMSAEECAEAILPAIAR 225 (263)
T ss_pred c-----cccCCCCHHHHHHHHHHHhhC
Confidence 1 123678999999999988753
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.4e-11 Score=111.33 Aligned_cols=141 Identities=13% Similarity=0.142 Sum_probs=98.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCC----CCccEEEEeeeecC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSIS----QEVTHLFWVMFQRL 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~----~~v~~V~h~A~~~~ 76 (360)
||++++++|++ +|++|++++|++... .+...+++ ++.+|++|.+++.++++.+. ..+|+|+|+|+...
T Consensus 16 iG~~la~~l~~------~G~~Vi~~~r~~~~~~~l~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 88 (277)
T PRK05993 16 IGAYCARALQS------DGWRVFATCRKEEDVAALEAEGLE-AFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQ 88 (277)
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHCCce-EEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCC
Confidence 79999999998 899999999976431 11124678 99999999998877776430 12799999997532
Q ss_pred C---------ChhHhhhhhHHH----HHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 77 K---------SEEINISNNSTM----FKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 77 ~---------~~~~~~~vNv~g----t~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
. +.+..+++|+.| ++++++++.+. +..+||++||...+. |.
T Consensus 89 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~-----------------~~---- 142 (277)
T PRK05993 89 PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-----GQGRIVQCSSILGLV-----------------PM---- 142 (277)
T ss_pred CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-----CCCEEEEECChhhcC-----------------CC----
Confidence 1 124578999999 55555555554 567999998853221 00
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
+ +...|+.+|...+ ...|+.+++++|+.|-.+
T Consensus 143 ---~-~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 143 ---K-YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred ---C-ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 1 1334887776544 346899999999888543
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.4e-10 Score=102.18 Aligned_cols=199 Identities=14% Similarity=0.121 Sum_probs=127.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++++++|++ +|++|++++|++... . ....++. ++.+|++|.+++.++++++ . ++|+|
T Consensus 13 ~iG~~la~~l~~------~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~-~id~v 84 (245)
T PRK12824 13 GIGSAIARELLN------DGYRVIATYFSGNDCAKDWFEEYGFTEDQVR-LKELDVTDTEECAEALAEIEEEEG-PVDIL 84 (245)
T ss_pred hHHHHHHHHHHH------cCCEEEEEeCCcHHHHHHHHHHhhccCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 379999999998 899999999874210 0 1124588 9999999999888877653 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|+.... +.+..+++|+.++.++++++.+.++ ..+..+||++||...++..
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~iss~~~~~~~----------------- 146 (245)
T PRK12824 85 VNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMC-EQGYGRIINISSVNGLKGQ----------------- 146 (245)
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HhCCeEEEEECChhhccCC-----------------
Confidence 999974311 2345779999999998776644221 1146799999986544310
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ ....|+.+|...+ ...++++++++|+.+.++........ ....+. ...++
T Consensus 147 ----~----~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-----~~~~~~--~~~~~---- 207 (245)
T PRK12824 147 ----F----GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPE-----VLQSIV--NQIPM---- 207 (245)
T ss_pred ----C----CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHH-----HHHHHH--hcCCC----
Confidence 0 0123777765222 34579999999999987643221111 111111 11111
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
..+....++++++.+++... ...|+.+++.+|..+
T Consensus 208 --------~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~~ 244 (245)
T PRK12824 208 --------KRLGTPEEIAAAVAFLVSEAAGFITGETISINGGLYM 244 (245)
T ss_pred --------CCCCCHHHHHHHHHHHcCccccCccCcEEEECCCeec
Confidence 12345778888887776432 234899999888643
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-10 Score=106.53 Aligned_cols=197 Identities=13% Similarity=0.069 Sum_probs=124.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
.||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|||+|
T Consensus 21 ~IG~~~a~~l~~------~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~id~li~~a 92 (255)
T PRK05717 21 GIGLGIAAWLIA------EGWQVVLADLDRERGSKVAKALGENAW-FIAMDVADEAQVAAGVAEVLGQFG-RLDALVCNA 92 (255)
T ss_pred hHHHHHHHHHHH------cCCEEEEEcCCHHHHHHHHHHcCCceE-EEEccCCCHHHHHHHHHHHHHHhC-CCCEEEECC
Confidence 489999999999 899999998764321 00124577 8999999998886665432 2 279999999
Q ss_pred eecCC-----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 73 FQRLK-----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 73 ~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+.... +.+..+++|+.++.++++++...++. ...+||++||...+...
T Consensus 93 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~ii~~sS~~~~~~~------------------- 151 (255)
T PRK05717 93 AIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRA--HNGAIVNLASTRARQSE------------------- 151 (255)
T ss_pred CcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCcEEEEEcchhhcCCC-------------------
Confidence 85321 13467899999999999999753211 23578998886543210
Q ss_pred CCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
+ ....|+.+|...+ ...++.+.+++|+.+.++...... ......+ . . ...+ .
T Consensus 152 -----~-~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~--~~~~~~~--~-~-~~~~----~--- 212 (255)
T PRK05717 152 -----P-DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRR--AEPLSEA--D-H-AQHP----A--- 212 (255)
T ss_pred -----C-CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccccc--chHHHHH--H-h-hcCC----C---
Confidence 0 0223777775443 234589999999999987532211 0111000 0 0 0111 1
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..+.+.+|+|.++.+++... ...|+.+.+.+|.
T Consensus 213 -----~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 213 -----GRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGM 247 (255)
T ss_pred -----CCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCc
Confidence 12456888999888776432 1247888775543
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.4e-10 Score=104.16 Aligned_cols=147 Identities=11% Similarity=0.023 Sum_probs=100.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++|+++|++ +|++|++++|+.... .. ...++. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 13 giG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi 84 (256)
T PRK08643 13 GIGFAIAKRLVE------DGFKVAIVDYNEETAQAAADKLSKDGGKAI-AVKADVSDRDQVFAAVRQVVDTFG-DLNVVV 84 (256)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 389999999999 899999999875321 00 124577 8999999999887777643 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.++.++++++.+.++....-.+||++||...+.. .
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------~--- 146 (256)
T PRK08643 85 NNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG---------------N--- 146 (256)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC---------------C---
Confidence 99975321 22457889999999888888754321112357899888643210 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
| ....|+.+|...+ ...|+.++.++|+.+..|.
T Consensus 147 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 189 (256)
T PRK08643 147 ------P-ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM 189 (256)
T ss_pred ------C-CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence 0 1234776665432 3568999999999997763
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.1e-10 Score=102.87 Aligned_cols=198 Identities=11% Similarity=0.071 Sum_probs=125.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|.+++.++++.+ . ++|+|+|+|
T Consensus 17 IG~~ia~~l~~------~G~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~li~~a 88 (248)
T TIGR01832 17 LGQGIAVGLAE------AGADIVGAGRSEPSETQQQVEALGRRFL-SLTADLSDIEAIKALVDSAVEEFG-HIDILVNNA 88 (248)
T ss_pred HHHHHHHHHHH------CCCEEEEEcCchHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 79999999999 899999999865221 0 0124578 8999999999887766532 2 289999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +.++.+++|+.++.++++++...++......++|++||...|+.. +
T Consensus 89 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------------~----- 148 (248)
T TIGR01832 89 GIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG---------------I----- 148 (248)
T ss_pred CCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC---------------C-----
Confidence 85321 234568999999999999987542111114689999998766421 0
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
. ...|+.+|...+ ..+++.+++++|+.|..+.......... ....+.+ ..|
T Consensus 149 -~----~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~--~~~--------- 209 (248)
T TIGR01832 149 -R----VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADED---RNAAILE--RIP--------- 209 (248)
T ss_pred -C----CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChH---HHHHHHh--cCC---------
Confidence 0 112666665433 3458999999999998764221111000 0000100 111
Q ss_pred ccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
...++..+|+|+++++++.... ..|+++.+.+|
T Consensus 210 ---~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg 244 (248)
T TIGR01832 210 ---AGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDGG 244 (248)
T ss_pred ---CCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCCC
Confidence 1235678999999988875432 23776655433
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.4e-10 Score=105.97 Aligned_cols=200 Identities=10% Similarity=0.029 Sum_probs=127.9
Q ss_pred chHHHHHHHhcCCCCCCCCcE-EEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWK-VYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~-V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++ |++++|++.+. . .....+. ++.+|++|++++.++++.+ .. +|.|+
T Consensus 18 iG~~la~~l~~------~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~-id~li 89 (260)
T PRK06198 18 LGAAIARAFAE------RGAAGLVICGRNAEKGEAQAAELEALGAKAV-FVQADLSDVEDCRRVVAAADEAFGR-LDALV 89 (260)
T ss_pred HHHHHHHHHHH------CCCCeEEEEcCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHHHHhCC-CCEEE
Confidence 79999999998 8999 99999875321 0 0124577 8999999999888877653 22 79999
Q ss_pred EeeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... + .+..+++|+.++.++++++.+.++......+||++||...|+..
T Consensus 90 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~------------------ 151 (260)
T PRK06198 90 NAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ------------------ 151 (260)
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC------------------
Confidence 99985321 2 24568999999999999987643211123579999988766421
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCc---c-hhHHHHHHHHHHHhhcCCCee
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSL---N-NSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~---~-~~~~~~~~~~~~~~~~~~~~~ 206 (360)
+ ....|+.+|...+ ...++.++.++|+.++++..... + +.... ..... + ...+
T Consensus 152 ------~-~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~--~~~~~-~-~~~~-- 218 (260)
T PRK06198 152 ------P-FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDD--WLEKA-A-ATQP-- 218 (260)
T ss_pred ------C-CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChH--HHHHH-h-ccCC--
Confidence 0 0223776665433 24579999999999998753210 0 00000 00000 0 0111
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
+.-+.+++++++++++++..+ ...|+.|++.++.
T Consensus 219 ----------~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 219 ----------FGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred ----------ccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence 123467889999999876533 2358888886654
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.2e-10 Score=103.81 Aligned_cols=143 Identities=13% Similarity=-0.000 Sum_probs=98.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
.||++|+++|++ +|++|++++|+..... ....++. ++.+|++|.+++.++++.+ . ++|+|||+|
T Consensus 17 ~iG~~la~~l~~------~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~a 88 (249)
T PRK06500 17 GIGLETARQFLA------EGARVAITGRDPASLEAARAELGESAL-VIRADAGDVAAQKALAQALAEAFG-RLDAVFINA 88 (249)
T ss_pred hHHHHHHHHHHH------CCCEEEEecCCHHHHHHHHHHhCCceE-EEEecCCCHHHHHHHHHHHHHHhC-CCCEEEECC
Confidence 489999999999 8999999998743210 0123577 8999999998776655422 2 279999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEecc-CccccccccCCcccCCcCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMG-TKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS-~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
+.... +.+..+++|+.++.++++++...++ ...++|+.|| .+.||.+
T Consensus 89 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~i~~~S~~~~~~~~-------------------- 145 (249)
T PRK06500 89 GVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLA---NPASIVLNGSINAHIGMP-------------------- 145 (249)
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCEEEEEechHhccCCC--------------------
Confidence 84221 2345789999999999999986421 1245666655 3333310
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
....|+.+|...+ ...+++++++||+.+++|.
T Consensus 146 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 146 ------NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred ------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 1234777765543 3458999999999999874
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.9e-10 Score=103.58 Aligned_cols=196 Identities=11% Similarity=0.005 Sum_probs=126.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
.||++++++|++ +|++|+++.|+.... . ....++. ++.+|++|.+++.++++.+ . .+|+
T Consensus 60 gIG~aia~~L~~------~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~id~ 131 (294)
T PRK07985 60 GIGRAAAIAYAR------EGADVAISYLPVEEEDAQDVKKIIEECGRKAV-LLPGDLSDEKFARSLVHEAHKALG-GLDI 131 (294)
T ss_pred cHHHHHHHHHHH------CCCEEEEecCCcchhhHHHHHHHHHHcCCeEE-EEEccCCCHHHHHHHHHHHHHHhC-CCCE
Confidence 389999999999 899999887653211 0 0123577 8999999998887766532 2 2799
Q ss_pred EEEeeeecC----------CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 68 LFWVMFQRL----------KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 68 V~h~A~~~~----------~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
++|+|+... .+....+++|+.|+.++++++...++ .+ .+||++||...|...
T Consensus 132 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~-g~iv~iSS~~~~~~~--------------- 193 (294)
T PRK07985 132 MALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLP--KG-ASIITTSSIQAYQPS--------------- 193 (294)
T ss_pred EEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh--cC-CEEEEECCchhccCC---------------
Confidence 999997421 12346789999999999999986532 12 589999988665420
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCc-chhHHHHHHHHHHHhhcCCCee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSL-NNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
+ ....|+.+|...+ ...|+++.+++|+.|++|..... ... . ....+. ...|+
T Consensus 194 ---------~-~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~-~---~~~~~~--~~~~~- 256 (294)
T PRK07985 194 ---------P-HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ-D---KIPQFG--QQTPM- 256 (294)
T ss_pred ---------C-CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCH-H---HHHHHh--ccCCC-
Confidence 0 0223777765433 24689999999999999842110 010 0 010110 11121
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
..+...+|+|+++++++..+. ..|+++.+.+|.
T Consensus 257 -----------~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 257 -----------KRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred -----------CCCCCHHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence 124567889999888875322 348888886664
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.4e-10 Score=103.21 Aligned_cols=203 Identities=11% Similarity=-0.028 Sum_probs=123.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~ 75 (360)
||++++++|++ +|++|+++.|+.... .+...++. ++.+|++|++++.++++.+ . ++|+|+|+|+..
T Consensus 19 IG~~~a~~l~~------~G~~v~~~~~~~~~~~~~l~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~li~~ag~~ 90 (255)
T PRK06463 19 IGRAIAEAFLR------EGAKVAVLYNSAENEAKELREKGVF-TIKCDVGNRDQVKKSKEVVEKEFG-RVDVLVNNAGIM 90 (255)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcHHHHHHHHhCCCe-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcC
Confidence 89999999999 899998887654321 11122578 9999999999988877643 2 279999999853
Q ss_pred CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 76 LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 76 ~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
.. +.+..+++|+.|+..+.+++...++.. +..+||++||...|+.+ .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~-----------------~------ 146 (255)
T PRK06463 91 YLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIASNAGIGTA-----------------A------ 146 (255)
T ss_pred CCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHhCCCC-----------------C------
Confidence 21 234578999999777666655432111 34689999987655311 0
Q ss_pred CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 147 PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
+ ....|+.+|...+ ...++.+.+++|+.|--+-................+. ...+
T Consensus 147 ~-~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~------------ 211 (255)
T PRK06463 147 E-GTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFR--NKTV------------ 211 (255)
T ss_pred C-CccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHH--hCCC------------
Confidence 0 1234777775433 2458999999998874431100000000000000010 1111
Q ss_pred cccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 217 FCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
...+...+++|+++++++..+. ..|+.+.+.+|..
T Consensus 212 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~ 248 (255)
T PRK06463 212 LKTTGKPEDIANIVLFLASDDARYITGQVIVADGGRI 248 (255)
T ss_pred cCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCee
Confidence 1224568889999988875432 3488888866653
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.5e-10 Score=102.90 Aligned_cols=198 Identities=11% Similarity=0.028 Sum_probs=127.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
.||++++++|++ +|++|++++|+.... ......+. .+.+|++|++++.++++++ . ++|+|+|+|
T Consensus 26 ~IG~~la~~l~~------~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~~d~vi~~a 97 (255)
T PRK06841 26 GIGHAIAELFAA------KGARVALLDRSEDVAEVAAQLLGGNAK-GLVCDVSDSQSVEAAVAAVISAFG-RIDILVNSA 97 (255)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHhhCCceE-EEEecCCCHHHHHHHHHHHHHHhC-CCCEEEECC
Confidence 379999999999 899999999875321 01124567 8999999999887776643 2 279999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +.+..+++|+.|+.++++++...++.. +..+||++||...... ..
T Consensus 98 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~-----------------~~--- 156 (255)
T PRK06841 98 GVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-GGGKIVNLASQAGVVA-----------------LE--- 156 (255)
T ss_pred CCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-CCceEEEEcchhhccC-----------------CC---
Confidence 85321 223478999999999999987543211 3578999988642210 00
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
....|+.+|...+ ...++.+..++|+.|..+.......... .. .+. .+.|
T Consensus 157 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~-~~~--~~~~--------- 216 (255)
T PRK06841 157 -----RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEK---GE-RAK--KLIP--------- 216 (255)
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhH---HH-HHH--hcCC---------
Confidence 0223776665432 3458999999999887753221111000 00 010 1111
Q ss_pred ccccccccCHHHHHHHHHHHHcCCCC--CCCceeccCCC
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDRA--KNQAFNCTNGD 250 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~~--~g~~yni~~g~ 250 (360)
...+.+.+|+|+++++++..+.. .|+++.+.+|.
T Consensus 217 ---~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 217 ---AGRFAYPEEIAAAALFLASDAAAMITGENLVIDGGY 252 (255)
T ss_pred ---CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence 12356788999999988764322 48888886664
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.5e-10 Score=99.89 Aligned_cols=194 Identities=12% Similarity=0.074 Sum_probs=122.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC---C
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---K 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---~ 77 (360)
.||++++++|++ +|++|++++|++.... ..++. ++.+|++|+ +.++++.... +|+|+|+|+... .
T Consensus 16 ~iG~~ia~~l~~------~G~~v~~~~r~~~~~~--~~~~~-~~~~D~~~~--~~~~~~~~~~-id~lv~~ag~~~~~~~ 83 (235)
T PRK06550 16 GIGLAQARAFLA------QGAQVYGVDKQDKPDL--SGNFH-FLQLDLSDD--LEPLFDWVPS-VDILCNTAGILDDYKP 83 (235)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCccccc--CCcEE-EEECChHHH--HHHHHHhhCC-CCEEEECCCCCCCCCC
Confidence 389999999999 8999999998764321 34678 899999998 4555544432 799999998421 1
Q ss_pred -------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCC
Q 037566 78 -------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPN 150 (360)
Q Consensus 78 -------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~ 150 (360)
+.+..+++|+.|+.++++++...++.. +..+||++||...+... + ..
T Consensus 84 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~------------------------~-~~ 137 (235)
T PRK06550 84 LLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-KSGIIINMCSIASFVAG------------------------G-GG 137 (235)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhccCC------------------------C-CC
Confidence 234578999999999999987532111 34589999886543210 0 01
Q ss_pred CcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccc
Q 037566 151 FYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDM 220 (360)
Q Consensus 151 ~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~ 220 (360)
..|+.+|...+ ...++++++++|+.|..+.....+... .....+. ...| ...+
T Consensus 138 ~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~--~~~~------------~~~~ 200 (235)
T PRK06550 138 AAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPG---GLADWVA--RETP------------IKRW 200 (235)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCch---HHHHHHh--ccCC------------cCCC
Confidence 22555554322 345899999999999887432111110 0001111 1111 1234
Q ss_pred cCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 221 SDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 221 ~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
...+++|+++++++... ...|+++.+.+|
T Consensus 201 ~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 201 AEPEEVAELTLFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred CCHHHHHHHHHHHcChhhccCCCcEEEECCc
Confidence 56789999999887532 234787777555
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.6e-11 Score=108.28 Aligned_cols=146 Identities=16% Similarity=0.107 Sum_probs=99.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeec
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~ 75 (360)
.||++++++|++ +|++|++++|++.... ....+++ ++.+|++|++++.++++.+ . ++|+|+|+|+..
T Consensus 14 giG~~la~~l~~------~G~~V~~~~r~~~~l~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~~-~id~li~~ag~~ 85 (273)
T PRK06182 14 GIGKATARRLAA------QGYTVYGAARRVDKMEDLASLGVH-PLSLDVTDEASIKAAVDTIIAEEG-RIDVLVNNAGYG 85 (273)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHhCCCe-EEEeeCCCHHHHHHHHHHHHHhcC-CCCEEEECCCcC
Confidence 389999999998 8999999999754310 1124588 9999999999988877632 1 279999999853
Q ss_pred CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 76 LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 76 ~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
.. +.+..+++|+.|+.++++++...++ ..+..++|++||...+. ..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~-~~~~g~iv~isS~~~~~---------------~~--------- 140 (273)
T PRK06182 86 SYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMR-AQRSGRIINISSMGGKI---------------YT--------- 140 (273)
T ss_pred CCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcchhhcC---------------CC---------
Confidence 21 2355789999996665555443221 11467999998853211 00
Q ss_pred CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 147 PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
| ....|+.+|...+ ...+++++++||+.|.++.
T Consensus 141 ~-~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 183 (273)
T PRK06182 141 P-LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW 183 (273)
T ss_pred C-CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence 0 0223776665433 3468999999999998864
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.3e-10 Score=101.96 Aligned_cols=192 Identities=9% Similarity=0.009 Sum_probs=121.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------C-----------CCCCCceeeEeeccCChHHHHHHHccC--
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------W-----------FPSSHVDHYITFDALDSTDTTQKLSSI-- 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~-----------~~~~~v~~~v~gDl~d~~~l~~~l~~~-- 61 (360)
||.+++++|++ +|++|++++|++.+. . ....+++ ++.+|++|.+++.++++.+
T Consensus 19 iG~~la~~l~~------~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 91 (256)
T PRK12748 19 IGAAVCRRLAA------KGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCE-HMEIDLSQPYAPNRVFYAVSE 91 (256)
T ss_pred HHHHHHHHHHH------cCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHH
Confidence 89999999999 899999999873211 0 0123578 9999999999887776542
Q ss_pred --CCCccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccC
Q 037566 62 --SQEVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVG 130 (360)
Q Consensus 62 --~~~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g 130 (360)
. ++|+|||+|+.... +.+..+++|+.|+.++++++...++ ...-.+||++||...|+..
T Consensus 92 ~~g-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~ss~~~~~~~-------- 161 (256)
T PRK12748 92 RLG-DPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYD-GKAGGRIINLTSGQSLGPM-------- 161 (256)
T ss_pred hCC-CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhh-hcCCeEEEEECCccccCCC--------
Confidence 2 28999999985321 2345689999999999999875321 1124589999987554310
Q ss_pred CcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhh
Q 037566 131 QLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRH 200 (360)
Q Consensus 131 ~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~ 200 (360)
. ....|+.+|...+ ...+++++.++|+.+..+.... .. ...+ .
T Consensus 162 ---------~--------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~---~~-----~~~~--~ 214 (256)
T PRK12748 162 ---------P--------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE---EL-----KHHL--V 214 (256)
T ss_pred ---------C--------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh---hH-----HHhh--h
Confidence 0 1223777665444 2358999999998765432110 00 0000 0
Q ss_pred cCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 201 QGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 201 ~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
.. .+.. .+...+++++++.+++... ...|+++++.+|
T Consensus 215 ~~----~~~~--------~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 215 PK----FPQG--------RVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred cc----CCCC--------CCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 01 1111 1234678888888776532 234888888655
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.6e-10 Score=101.37 Aligned_cols=194 Identities=12% Similarity=0.031 Sum_probs=122.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|+.+.|+.... .....++. ++.+|++|++++.++++.+ . ++|+||
T Consensus 17 iG~~la~~l~~------~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi 88 (245)
T PRK12937 17 IGAAIARRLAA------DGFAVAVNYAGSAAAADELVAEIEAAGGRAI-AVQADVADAAAVTRLFDAAETAFG-RIDVLV 88 (245)
T ss_pred HHHHHHHHHHH------CCCEEEEecCCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 899998887754210 01134678 8999999999988887753 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++.+.++ .-.+||++||...+.. .
T Consensus 89 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~~ss~~~~~~---------------~--- 147 (245)
T PRK12937 89 NNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLG---QGGRIINLSTSVIALP---------------L--- 147 (245)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhc---cCcEEEEEeeccccCC---------------C---
Confidence 99985321 2345678999999999999876532 2258999987643221 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
| +...|+.+|...+ ...++.+++++|+.+-.+...+..... ....+. ...|+.
T Consensus 148 ------~-~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~----~~~~~~--~~~~~~---- 210 (245)
T PRK12937 148 ------P-GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAE----QIDQLA--GLAPLE---- 210 (245)
T ss_pred ------C-CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHH----HHHHHH--hcCCCC----
Confidence 0 1233776665443 235789999999877655311111110 000111 111211
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
-+.+.+|+++++++++..+. ..|+++++.+|
T Consensus 211 --------~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 211 --------RLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred --------CCCCHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence 12357889999888775432 34888888654
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.8e-10 Score=100.27 Aligned_cols=142 Identities=12% Similarity=0.006 Sum_probs=96.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC----CCCCceeeEeeccCChHHHHHHHccC----CCCcc
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF----PSSHVDHYITFDALDSTDTTQKLSSI----SQEVT 66 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~----~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~ 66 (360)
.||+++++.|++ +|++|++++|++.+. .. ....+. .+.+|++|++++.++++.+ . ++|
T Consensus 10 ~iG~~~a~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id 81 (251)
T PRK07069 10 GLGRAIARRMAE------QGAKVFLTDINDAAGLDAFAAEINAAHGEGVAF-AAVQDVTDEAQWQALLAQAADAMG-GLS 81 (251)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCcchHHHHHHHHHHhcCCCceEE-EEEeecCCHHHHHHHHHHHHHHcC-Ccc
Confidence 389999999999 899999999873221 00 011234 5889999999988777643 2 279
Q ss_pred EEEEeeeecCC---------ChhHhhhhhHH----HHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcC
Q 037566 67 HLFWVMFQRLK---------SEEINISNNST----MFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 67 ~V~h~A~~~~~---------~~~~~~~vNv~----gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
+|+|+|+.... +....+++|+. +++++++++++. +.++||++||...|+..
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~~ss~~~~~~~----------- 145 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-----QPASIVNISSVAAFKAE----------- 145 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCcEEEEecChhhccCC-----------
Confidence 99999985321 12346788988 777777777664 56899999987665421
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh------------cCCCCcEEEEcCCCeeecC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS------------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e------------~~~~~~~~ilRp~~vyGp~ 180 (360)
+ ....|+.+|...+ ...++.++.++|+.+.+|.
T Consensus 146 -------------~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~ 190 (251)
T PRK07069 146 -------------P-DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGI 190 (251)
T ss_pred -------------C-CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcc
Confidence 0 0123666554322 1235889999999998874
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.8e-10 Score=101.74 Aligned_cols=197 Identities=13% Similarity=0.056 Sum_probs=124.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|
T Consensus 21 IG~~~a~~l~~------~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~id~l 92 (257)
T PRK09242 21 IGLAIAREFLG------LGADVLIVARDADALAQARDELAEEFPEREVH-GLAADVSDDEDRRAILDWVEDHWD-GLHIL 92 (257)
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 79999999998 899999999875321 00124577 8999999999887776543 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|+.... +.+..+++|+.++.++++++...++.. +..+||++||...++..
T Consensus 93 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~~~----------------- 154 (257)
T PRK09242 93 VNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGSVSGLTHV----------------- 154 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECccccCCCC-----------------
Confidence 999985211 234578999999999999986533211 35789999987544310
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
. +...|+.+|...+ ...++.++.++|+.+.+|...+.++... ...... ...++.
T Consensus 155 ~--------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~---~~~~~~--~~~~~~--- 218 (257)
T PRK09242 155 R--------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPD---YYEQVI--ERTPMR--- 218 (257)
T ss_pred C--------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChH---HHHHHH--hcCCCC---
Confidence 0 1223665554322 3468999999999998875332221110 111110 111211
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
-+...+|++.++.+++... ...|+.+++.+|
T Consensus 219 ---------~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 251 (257)
T PRK09242 219 ---------RVGEPEEVAAAVAFLCMPAASYITGQCIAVDGG 251 (257)
T ss_pred ---------CCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 1234677888887776432 234787777544
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.9e-10 Score=100.66 Aligned_cols=197 Identities=12% Similarity=0.044 Sum_probs=124.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEE-ecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGT-ARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l-~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++|+++|++ +|++|+++ +|++... .....++. ++.+|++|++++.++++.+ . ++|+|
T Consensus 16 ~iG~~la~~l~~------~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~v 87 (247)
T PRK05565 16 GIGRAIAELLAK------EGAKVVIAYDINEEAAQELLEEIKEEGGDAI-AVKADVSSEEDVENLVEQIVEKFG-KIDIL 87 (247)
T ss_pred HHHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHhC-CCCEE
Confidence 379999999998 89999988 7764321 00124578 8999999999988877633 1 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||+|+.... ..+..+++|+.++.++++++...++ ..+.++||++||...+... +
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~~~~~~---------------~- 150 (247)
T PRK05565 88 VNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMI-KRKSGVIVNISSIWGLIGA---------------S- 150 (247)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECCHhhccCC---------------C-
Confidence 999985321 2345789999999999988865421 1145789999886543210 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
....|+.+|...+ ...+++++++||+.+-.+..+..... . ...+. ...+
T Consensus 151 ---------~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~-~----~~~~~--~~~~----- 209 (247)
T PRK05565 151 ---------CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE-D----KEGLA--EEIP----- 209 (247)
T ss_pred ---------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH-H----HHHHH--hcCC-----
Confidence 0223666553222 34689999999998876543221111 0 00000 0001
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
...+...+++++++++++... ...|+.+++.+|.
T Consensus 210 -------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~ 245 (247)
T PRK05565 210 -------LGRLGKPEEIAKVVLFLASDDASYITGQIITVDGGW 245 (247)
T ss_pred -------CCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCCc
Confidence 112456788999888887543 2347888886653
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-10 Score=104.25 Aligned_cols=145 Identities=15% Similarity=-0.005 Sum_probs=101.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++|+++|++ +|++|++++|++... .....+++ ++.+|++|++++.++++.+ . ++|.||
T Consensus 18 ~iG~~l~~~L~~------~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi 89 (239)
T PRK07666 18 GIGRAVAIALAK------EGVNVGLLARTEENLKAVAEEVEAYGVKVV-IATADVSDYEEVTAAIEQLKNELG-SIDILI 89 (239)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHhCCeEE-EEECCCCCHHHHHHHHHHHHHHcC-CccEEE
Confidence 379999999998 899999999975321 01124678 8999999999988887643 2 279999
Q ss_pred EeeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... + .++.+++|+.++.++++++...++ ..+.+++|++||...+...
T Consensus 90 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~ss~~~~~~~------------------ 150 (239)
T PRK07666 90 NNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMI-ERQSGDIINISSTAGQKGA------------------ 150 (239)
T ss_pred EcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCcEEEEEcchhhccCC------------------
Confidence 99974321 2 245689999999999999875322 1246789999886543210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
+ +...|+.+|...+ ...+++++++||+.+..+
T Consensus 151 ------~-~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~ 192 (239)
T PRK07666 151 ------A-VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATD 192 (239)
T ss_pred ------C-CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCc
Confidence 0 1223666654332 346899999999988765
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.1e-10 Score=103.32 Aligned_cols=187 Identities=14% Similarity=0.081 Sum_probs=114.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCC----CCccEEEEeeeec
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSIS----QEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~----~~v~~V~h~A~~~ 75 (360)
.||.++++.|++ +|++|++++|++... .....+++ ++.+|++|.+++.++++.+. ..++.++|+|+..
T Consensus 13 ~IG~~la~~l~~------~g~~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~ 85 (256)
T PRK08017 13 GIGLEAALELKR------RGYRVLAACRKPDDVARMNSLGFT-GILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFG 85 (256)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHhHHHHhCCCe-EEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCC
Confidence 489999999998 899999999875432 11123578 89999999988777665431 1278999998853
Q ss_pred CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 76 LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 76 ~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
.. +.+..+++|+.|+.++.+.+.+.++ ..+.+++|++||...+.. .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~-----------------~------- 140 (256)
T PRK08017 86 VYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAML-PHGEGRIVMTSSVMGLIS-----------------T------- 140 (256)
T ss_pred CccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh-hcCCCEEEEEcCcccccC-----------------C-------
Confidence 21 2345789999999887544433211 115678999988532210 0
Q ss_pred CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 147 PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
+ ....|+.+|...+ ...+++++++||+.+..+-..+... . + ...+...++. .
T Consensus 141 ~-~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~----------~-~-~~~~~~~~~~-----~ 202 (256)
T PRK08017 141 P-GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQ----------T-Q-SDKPVENPGI-----A 202 (256)
T ss_pred C-CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccc----------h-h-hccchhhhHH-----H
Confidence 0 1234777765443 3468999999997664321111000 0 0 0111111121 1
Q ss_pred cccccCHHHHHHHHHHHHcCC
Q 037566 217 FCDMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~ 237 (360)
.+++++++|++++++.++..+
T Consensus 203 ~~~~~~~~d~a~~~~~~~~~~ 223 (256)
T PRK08017 203 ARFTLGPEAVVPKLRHALESP 223 (256)
T ss_pred hhcCCCHHHHHHHHHHHHhCC
Confidence 235688999999998887643
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.1e-09 Score=99.85 Aligned_cols=198 Identities=11% Similarity=0.054 Sum_probs=124.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++++++|++ +|++|+++.|+.... . .....+. ++.+|++|++++.++++.+ . ++|+|
T Consensus 13 giG~~~a~~l~~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~l 84 (256)
T PRK12743 13 GIGKACALLLAQ------QGFDIGITWHSDEEGAKETAEEVRSHGVRAE-IRQLDLSDLPEGAQALDKLIQRLG-RIDVL 84 (256)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCChHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 389999999999 999998887654321 0 0134678 8999999999887766532 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|+.... +.+..+++|+.++.++++++...++....-.+||++||.... .+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------------~~~ 147 (256)
T PRK12743 85 VNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------------TPL 147 (256)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------------CCC
Confidence 999985221 234578999999999999987653111112589999875311 010
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
.+...|+.+|...+ ...++.++.++|+.+++|......... .... ..+.++ +
T Consensus 148 --------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~-----~~~~--~~~~~~---~ 209 (256)
T PRK12743 148 --------PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDV-----KPDS--RPGIPL---G 209 (256)
T ss_pred --------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHH-----HHHH--HhcCCC---C
Confidence 01234666664322 346899999999999987432211110 0000 011111 1
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
.....+|++.++.+++.... ..|+++++.+|.
T Consensus 210 ---------~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~ 243 (256)
T PRK12743 210 ---------RPGDTHEIASLVAWLCSEGASYTTGQSLIVDGGF 243 (256)
T ss_pred ---------CCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 13467889999888775432 348888876654
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.9e-10 Score=99.39 Aligned_cols=187 Identities=14% Similarity=0.013 Sum_probs=120.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC-CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF-PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~-~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
.||++|+++|++ +|++|++++|++... .. ...+++ ++.+|+.|.+++.++++++ . ++|+|||
T Consensus 17 ~iG~~la~~l~~------~g~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~ 88 (237)
T PRK07326 17 GIGFAIAEALLA------EGYKVAITARDQKELEEAAAELNNKGNVL-GLAADVRDEADVQRAVDAIVAAFG-GLDVLIA 88 (237)
T ss_pred cHHHHHHHHHHH------CCCEEEEeeCCHHHHHHHHHHHhccCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 379999999998 899999999976331 01 114678 8999999999988877643 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.++.+++|+.++.++++++.+.++ .+.++||++||...+.. ..
T Consensus 89 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~iv~~ss~~~~~~-----------------~~- 148 (237)
T PRK07326 89 NAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK--RGGGYIINISSLAGTNF-----------------FA- 148 (237)
T ss_pred CCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH--HCCeEEEEECChhhccC-----------------CC-
Confidence 9974321 1345689999999999999876421 13568999988643221 00
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+...|..+|...+ ...+++++++||+.+..+.... .+ ...
T Consensus 149 -------~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~-------------------~~----~~~ 198 (237)
T PRK07326 149 -------GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH-------------------TP----SEK 198 (237)
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc-------------------cc----chh
Confidence 1223665553221 3468999999999886642111 00 000
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCCCC-CCceeccCCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDRAK-NQAFNCTNGD 250 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~~~-g~~yni~~g~ 250 (360)
. ...+...|++++++.++..+... .....+.++.
T Consensus 199 ~-----~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~~~~ 233 (237)
T PRK07326 199 D-----AWKIQPEDIAQLVLDLLKMPPRTLPSKIEVRPSR 233 (237)
T ss_pred h-----hccCCHHHHHHHHHHHHhCCccccccceEEecCC
Confidence 0 01256889999998887655332 3444454444
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-10 Score=104.69 Aligned_cols=147 Identities=12% Similarity=0.040 Sum_probs=105.2
Q ss_pred HHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC-CChhHhhh
Q 037566 6 LAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-KSEEINIS 84 (360)
Q Consensus 6 lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-~~~~~~~~ 84 (360)
++++|++ +|++|++++|+.... ...+ ++.+|++|.+++.++++.+..++|+|||+|+... .+.+..++
T Consensus 1 ~a~~l~~------~G~~Vv~~~r~~~~~----~~~~-~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~ 69 (241)
T PRK12428 1 TARLLRF------LGARVIGVDRREPGM----TLDG-FIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVAR 69 (241)
T ss_pred ChHHHHh------CCCEEEEEeCCcchh----hhhH-hhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhh
Confidence 4788888 899999999976432 2346 8999999999999888764223899999998642 45677899
Q ss_pred hhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC----------------CCCCCC
Q 037566 85 NNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED----------------SLRLPF 148 (360)
Q Consensus 85 vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~----------------~p~~p~ 148 (360)
+|+.|+.++++++...++ .-.+||++||...|+.+. ..+..|. .|. +
T Consensus 70 vN~~~~~~l~~~~~~~~~---~~g~Iv~isS~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 132 (241)
T PRK12428 70 VNFLGLRHLTEALLPRMA---PGGAIVNVASLAGAEWPQ------------RLELHKALAATASFDEGAAWLAAHPV-A- 132 (241)
T ss_pred hchHHHHHHHHHHHHhcc---CCcEEEEeCcHHhhcccc------------chHHHHhhhccchHHHHHHhhhccCC-C-
Confidence 999999999999986532 125899999998886321 1111111 111 1
Q ss_pred CCCcHHHHHHHHh-----------cCCCCcEEEEcCCCeeecC
Q 037566 149 PNFYYAVEDIAAS-----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 149 p~~~Y~~ek~l~e-----------~~~~~~~~ilRp~~vyGp~ 180 (360)
+...|+.+|...+ ...|+.+.+++|+.|.++-
T Consensus 133 ~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~ 175 (241)
T PRK12428 133 LATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPI 175 (241)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcc
Confidence 2356888775432 3458999999999998863
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2e-10 Score=103.84 Aligned_cols=143 Identities=13% Similarity=0.073 Sum_probs=101.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--C-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC--
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--W-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-- 76 (360)
||++++++|++ +|++|++++|++... . ....++. ++.+|++|.+++.++++++...+|.++|.|+...
T Consensus 13 iG~~la~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~~~~ 85 (240)
T PRK06101 13 IGKQLALDYAK------QGWQVIACGRNQSVLDELHTQSANIF-TLAFDVTDHPGTKAALSQLPFIPELWIFNAGDCEYM 85 (240)
T ss_pred HHHHHHHHHHh------CCCEEEEEECCHHHHHHHHHhcCCCe-EEEeeCCCHHHHHHHHHhcccCCCEEEEcCcccccC
Confidence 79999999998 899999999975321 0 1124678 8999999999999998876423678888886321
Q ss_pred C----C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc-cccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 77 K----S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK-HYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 77 ~----~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~-vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
. + .+..+++|+.|+.++++++...++ .-+++|++||.. .++. |
T Consensus 86 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~iv~isS~~~~~~~-------------------------~- 136 (240)
T PRK06101 86 DDGKVDATLMARVFNVNVLGVANCIEGIQPHLS---CGHRVVIVGSIASELAL-------------------------P- 136 (240)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCeEEEEechhhccCC-------------------------C-
Confidence 1 2 235789999999999999986431 225788887753 1110 0
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
....|+.+|...+ ...+++++++||+.|+++.
T Consensus 137 ~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~ 178 (240)
T PRK06101 137 RAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL 178 (240)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCC
Confidence 1223777665443 3568999999999998863
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.2e-10 Score=100.03 Aligned_cols=196 Identities=15% Similarity=0.069 Sum_probs=122.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h~A 72 (360)
.||++++++|++ +|+.|+..+|+..... ....+++ ++.+|++|.+++.++++. .. ++|.|||+|
T Consensus 17 ~iG~~la~~l~~------~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~a 88 (245)
T PRK12936 17 GIGEEIARLLHA------QGAIVGLHGTRVEKLEALAAELGERVK-IFPANLSDRDEVKALGQKAEADLE-GVDILVNNA 88 (245)
T ss_pred hHHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHhCCceE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 479999999999 8999888877643210 0123578 899999999988777653 23 279999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc-ccccccCCcccCCcCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH-YMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
+.... +.+..+++|+.++.++++++.+.++ ..+..+||++||... ||.+
T Consensus 89 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~~-------------------- 147 (245)
T PRK12936 89 GITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMM-RRRYGRIINITSVVGVTGNP-------------------- 147 (245)
T ss_pred CCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HhCCCEEEEECCHHhCcCCC--------------------
Confidence 85321 2345789999999999998764211 114568999988643 3210
Q ss_pred CCCCCCCCCcHHHHHH--------HHh--cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDI--------AAS--YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~--------l~e--~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
....|+.+|. +++ ...++++++++|+.+..+........ ....+ . ...+
T Consensus 148 ------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-----~~~~~-~-~~~~-------- 206 (245)
T PRK12936 148 ------GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDK-----QKEAI-M-GAIP-------- 206 (245)
T ss_pred ------CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChH-----HHHHH-h-cCCC--------
Confidence 0112555553 222 34589999999987755432111100 00000 0 0111
Q ss_pred cccccccccCHHHHHHHHHHHHcCCCC--CCCceeccCCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTDRA--KNQAFNCTNGD 250 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~~~--~g~~yni~~g~ 250 (360)
...+.+..++++++++++..+.. .|+.|++.+|.
T Consensus 207 ----~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 207 ----MKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred ----CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence 11234588899998877654322 48999987764
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.3e-09 Score=99.87 Aligned_cols=200 Identities=12% Similarity=0.047 Sum_probs=123.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||.+++++|++ +|++|++++|++.... ....++. ++.+|++|++++.++++.+ . ++|+||
T Consensus 21 gIG~~~a~~l~~------~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi 92 (263)
T PRK07814 21 GLGAAIALAFAE------AGADVLIAARTESQLDEVAEQIRAAGRRAH-VVAADLAHPEATAGLAGQAVEAFG-RLDIVV 92 (263)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 489999999999 8999999999753210 0124678 8999999999987776643 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+.+|+.++.++++++...++...+..+||++||...+. +.
T Consensus 93 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------------~~- 154 (263)
T PRK07814 93 NNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-----------------AG- 154 (263)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------------CC-
Confidence 99984211 2445789999999999999975321111456899998753210 00
Q ss_pred CCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+ +...|+.+|...+ ....+.+..++|+.+..+......+.. .+...+. ...+
T Consensus 155 ------~-~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~---~~~~~~~--~~~~------- 215 (263)
T PRK07814 155 ------R-GFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAAND---ELRAPME--KATP------- 215 (263)
T ss_pred ------C-CCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCH---HHHHHHH--hcCC-------
Confidence 0 1334887776543 223578889999887654211100000 0000010 0111
Q ss_pred ccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
...+.+.+|+|+++++++... ...|+.+.+.+|.
T Consensus 216 -----~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~ 251 (263)
T PRK07814 216 -----LRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGGL 251 (263)
T ss_pred -----CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence 112456889999999887532 2347777775443
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.5e-09 Score=99.12 Aligned_cols=202 Identities=10% Similarity=-0.037 Sum_probs=122.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---------C--CCCCceeeEeeccCChHHHHHHHccC----CCCc
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---------F--PSSHVDHYITFDALDSTDTTQKLSSI----SQEV 65 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---------~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v 65 (360)
.||++++++|++ +|++|+++.+++.... + ...+++ ++.+|++|++++.++++.+ . ++
T Consensus 19 gIG~~~a~~l~~------~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~i 90 (257)
T PRK12744 19 NLGGLIARDLAA------QGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV-AFQADLTTAAAVEKLFDDAKAAFG-RP 90 (257)
T ss_pred hHHHHHHHHHHH------CCCcEEEEecCCccchHHHHHHHHHHHHhCCcEE-EEecCcCCHHHHHHHHHHHHHhhC-CC
Confidence 389999999998 8999888876542210 0 123678 8999999999988877643 2 27
Q ss_pred cEEEEeeeecC------C---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 66 THLFWVMFQRL------K---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 66 ~~V~h~A~~~~------~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
|+++|+|+... . +.+..+++|+.|+.++++++...++ .-.++++++|+.+...
T Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~---~~~~iv~~~ss~~~~~--------------- 152 (257)
T PRK12744 91 DIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLN---DNGKIVTLVTSLLGAF--------------- 152 (257)
T ss_pred CEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhc---cCCCEEEEecchhccc---------------
Confidence 99999998521 1 2345789999999999999876531 1235665533322110
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
. | ....|+.+|...+ ...++++++++|+.+..+...+...... .. +. .......++
T Consensus 153 ~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~-~~-~~-~~~~~~~~~- 218 (257)
T PRK12744 153 T---------P-FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEA-VA-YH-KTAAALSPF- 218 (257)
T ss_pred C---------C-CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccch-hh-cc-ccccccccc-
Confidence 0 0 0223666665444 2357999999999997753211111000 00 00 000000110
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCCC-CCCCceeccCCCc
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR-AKNQAFNCTNGDV 251 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~-~~g~~yni~~g~~ 251 (360)
...-+.+.+|+|+++.+++.... ..|+++++.+|..
T Consensus 219 ---------~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~~ 255 (257)
T PRK12744 219 ---------SKTGLTDIEDIVPFIRFLVTDGWWITGQTILINGGYT 255 (257)
T ss_pred ---------ccCCCCCHHHHHHHHHHhhcccceeecceEeecCCcc
Confidence 11236788999999998876421 2489999877643
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.5e-10 Score=100.57 Aligned_cols=199 Identities=10% Similarity=-0.019 Sum_probs=122.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~ 74 (360)
.||.+++++|++ +|++|++++|+.... ........ ++.+|++|.+++.++++.+ . ++|+|+|+|+.
T Consensus 18 gIG~~~a~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~ 89 (255)
T PRK06057 18 GIGLATARRLAA------EGATVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAETYG-SVDIAFNNAGI 89 (255)
T ss_pred hHHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHHHcC-CCCEEEECCCc
Confidence 489999999999 899999999875421 00111236 8899999999888777643 2 27999999985
Q ss_pred cCC-----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccC-ccccccccCCcccCCcCCCCCCCCCC
Q 037566 75 RLK-----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGT-KHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 75 ~~~-----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~-~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
... ..+..+++|+.|+.++++++...++.. +..++|++||. ++||.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~~sS~~~~~g~~-------------------- 148 (255)
T PRK06057 90 SPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKGSIINTASFVAVMGSA-------------------- 148 (255)
T ss_pred CCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCcEEEEEcchhhccCCC--------------------
Confidence 311 134577899999998888876432111 34578888775 334310
Q ss_pred CCCCCCCCCcHHHHHHHH----h------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDIAA----S------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~----e------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
.+...|+.+|... + ...++.++++||+.+.+|......... . . ...+... .++
T Consensus 149 -----~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~-~---~~~~~~~-~~~------ 211 (255)
T PRK06057 149 -----TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKD-P-E---RAARRLV-HVP------ 211 (255)
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCC-H-H---HHHHHHh-cCC------
Confidence 0122377666321 1 345899999999999887532211100 0 0 0001000 111
Q ss_pred cccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
...+.+++++++++.+++.... ..|+.+.+.+|
T Consensus 212 ----~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 212 ----MGRFAEPEEIAAAVAFLASDDASFITASTFLVDGG 246 (255)
T ss_pred ----CCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 1135678899999877665332 24788877655
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.6e-10 Score=101.61 Aligned_cols=140 Identities=12% Similarity=0.082 Sum_probs=99.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~~ 77 (360)
||++++++|++ +|++|++++|+... ...+. ++.+|++|++++.++++.+ . .+|+|+|+|+....
T Consensus 18 IG~~ia~~l~~------~G~~Vi~~~r~~~~----~~~~~-~~~~D~~~~~~i~~~~~~~~~~~~-~id~li~~Ag~~~~ 85 (258)
T PRK06398 18 IGKAVVNRLKE------EGSNVINFDIKEPS----YNDVD-YFKVDVSNKEQVIKGIDYVISKYG-RIDILVNNAGIESY 85 (258)
T ss_pred HHHHHHHHHHH------CCCeEEEEeCCccc----cCceE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCC
Confidence 79999999999 89999999987643 23678 9999999999888777643 2 27999999985221
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.|+.++++++.+.++.. +..+||++||...+... +
T Consensus 86 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------------~- 139 (258)
T PRK06398 86 GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINIASVQSFAVT------------------------R- 139 (258)
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeCcchhccCC------------------------C-
Confidence 233568999999999999987643211 34689999987544310 0
Q ss_pred CCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeec
Q 037566 149 PNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 149 p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp 179 (360)
+...|+.+|...+ ...++.+..++|+.|-.+
T Consensus 140 ~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 140 NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence 1234766665433 123488899999877554
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.4e-10 Score=102.32 Aligned_cols=139 Identities=13% Similarity=-0.042 Sum_probs=96.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
||++++++|++ +|++|++++|++... .....+++ ++.+|++|++++.+++.+- +|.|||+|+.
T Consensus 14 iG~~ia~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~---id~vi~~ag~ 83 (257)
T PRK09291 14 FGREVALRLAR------KGHNVIAGVQIAPQVTALRAEAARRGLALR-VEKLDLTDAIDRAQAAEWD---VDVLLNNAGI 83 (257)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcce-EEEeeCCCHHHHHHHhcCC---CCEEEECCCc
Confidence 79999999999 899999999975321 00124588 8999999999999888742 7999999985
Q ss_pred cCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 75 RLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 75 ~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
... ..+..+++|+.|+.++.+++...++.. +.++||++||...+.. .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~---------------~-------- 139 (257)
T PRK09291 84 GEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSMAGLIT---------------G-------- 139 (257)
T ss_pred CCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcChhhccC---------------C--------
Confidence 321 123467899999888777655422112 4579999988642210 0
Q ss_pred CCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCe
Q 037566 146 LPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSII 176 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~v 176 (360)
+ ....|+.+|...+ ...|++++++||+.+
T Consensus 140 -~-~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~ 178 (257)
T PRK09291 140 -P-FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPY 178 (257)
T ss_pred -C-CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcc
Confidence 0 1234776665544 246899999999765
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3e-10 Score=102.58 Aligned_cols=144 Identities=13% Similarity=0.014 Sum_probs=101.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++|+++|++ +|++|++++|++.... ....++. ++.+|++|++++.++++.+ . ++|.|+|
T Consensus 18 iG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~lv~ 89 (241)
T PRK07454 18 IGKATALAFAK------AGWDLALVARSQDALEALAAELRSTGVKAA-AYSIDLSNPEAIAPGIAELLEQFG-CPDVLIN 89 (241)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhCCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 8999999999753210 0124678 8999999999887777642 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.++.++++++...++.. +..+||++||...|+..
T Consensus 90 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~------------------- 149 (241)
T PRK07454 90 NAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSSIAARNAF------------------- 149 (241)
T ss_pred CCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhCcCC-------------------
Confidence 9985221 234568999999999988875532111 35789999988665421
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
+ +...|+.+|...+ ...+++++++||+.+-.+
T Consensus 150 -----~-~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~ 191 (241)
T PRK07454 150 -----P-QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTP 191 (241)
T ss_pred -----C-CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCC
Confidence 0 1233776665433 345899999999988665
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.3e-09 Score=96.78 Aligned_cols=146 Identities=12% Similarity=-0.005 Sum_probs=101.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+||
T Consensus 11 gIG~~la~~l~~------~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~~~~-~id~lI 82 (270)
T PRK05650 11 GLGRAIALRWAR------EGWRLALADVNEEGGEETLKLLREAGGDGF-YQRCDVRDYSQLTALAQACEEKWG-GIDVIV 82 (270)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 389999999999 899999999875331 01134677 8999999999888776532 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.++.++.+++...++ ..+..+||++||...+.. .
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~~~~-----------------~- 143 (270)
T PRK05650 83 NNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFK-RQKSGRIVNIASMAGLMQ-----------------G- 143 (270)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH-hCCCCEEEEECChhhcCC-----------------C-
Confidence 99985321 2234678999988888877643221 114679999988754421 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
+ ....|+.+|...+ ...++++++++|+.+..+.
T Consensus 144 ------~-~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 186 (270)
T PRK05650 144 ------P-AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL 186 (270)
T ss_pred ------C-CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc
Confidence 0 1234777665322 3468999999999998764
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-09 Score=100.09 Aligned_cols=199 Identities=11% Similarity=0.077 Sum_probs=124.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|.+++.++++.+ . .+|+++|+|+
T Consensus 18 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~id~lv~~ag 89 (261)
T PRK08265 18 IGAAVARALVA------AGARVAIVDIDADNGAAVAASLGERAR-FIATDITDDAAIERAVATVVARFG-RVDILVNLAC 89 (261)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhCCeeE-EEEecCCCHHHHHHHHHHHHHHhC-CCCEEEECCC
Confidence 79999999999 899999999975421 01134678 8999999999888877653 2 2799999998
Q ss_pred ecC-----C---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 74 QRL-----K---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 74 ~~~-----~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
... . +....+++|+.++.++++++...++ . +-.+||++||...+.. .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~~g~ii~isS~~~~~~---------------~-------- 144 (261)
T PRK08265 90 TYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-R-GGGAIVNFTSISAKFA---------------Q-------- 144 (261)
T ss_pred CCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-c-CCcEEEEECchhhccC---------------C--------
Confidence 421 1 2345789999999999999876542 1 2358999988643210 0
Q ss_pred CCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 146 LPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
+ ....|+.+|...+ ...++.+.+++|+.+..+-........ ......+ .....
T Consensus 145 -~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~--~~~~~~~----~~~~~--------- 207 (261)
T PRK08265 145 -T-GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGD--RAKADRV----AAPFH--------- 207 (261)
T ss_pred -C-CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccc--hhHHHHh----hcccC---------
Confidence 0 0223666654332 346899999999887654211100000 0000000 00000
Q ss_pred ccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 216 HFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
-..-+...+|+|+++++++..+. ..|+.+.+.+|.
T Consensus 208 p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~ 244 (261)
T PRK08265 208 LLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGGY 244 (261)
T ss_pred CCCCccCHHHHHHHHHHHcCccccCccCcEEEECCCe
Confidence 01123567899999998875432 348888886664
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.2e-10 Score=102.23 Aligned_cols=145 Identities=13% Similarity=-0.006 Sum_probs=101.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
.||++|+++|++ +|++|++++|++... .....+++ ++.+|++|.+++.++++++ ..++|+|+|+
T Consensus 12 ~iG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ 84 (260)
T PRK08267 12 GIGRATALLFAA------EGWRVGAYDINEAGLAALAAELGAGNAW-TGALDVTDRAAWDAALADFAAATGGRLDVLFNN 84 (260)
T ss_pred hHHHHHHHHHHH------CCCeEEEEeCCHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEC
Confidence 379999999999 899999999875431 01134688 9999999999988877653 1137999999
Q ss_pred eeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc-cccccccCCcccCCcCCCCCCCCC
Q 037566 72 MFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK-HYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 72 A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~-vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
|+.... +.+.++++|+.++.++++++...++.. +..+||++||.. .||..
T Consensus 85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~------------------- 144 (260)
T PRK08267 85 AGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-PGARVINTSSASAIYGQP------------------- 144 (260)
T ss_pred CCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEeCchhhCcCCC-------------------
Confidence 985321 235678999999999999986543212 346888888753 22210
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
....|+.+|...+ ...++++++++|+.+-.+
T Consensus 145 -------~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 145 -------GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA 185 (260)
T ss_pred -------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence 0223666664432 345899999999887653
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.5e-09 Score=96.48 Aligned_cols=198 Identities=8% Similarity=-0.033 Sum_probs=124.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .+ ...++. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 20 IG~~ia~~l~~------~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~g-~id~li 91 (254)
T PRK06114 20 IGQRIAIGLAQ------AGADVALFDLRTDDGLAETAEHIEAAGRRAI-QIAADVTSKADLRAAVARTEAELG-ALTLAV 91 (254)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcchHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 899999999875321 00 124577 8999999999888777643 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||.+.+... ..
T Consensus 92 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~-------------~~--- 154 (254)
T PRK06114 92 NAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIASMSGIIVN-------------RG--- 154 (254)
T ss_pred ECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECchhhcCCC-------------CC---
Confidence 99985321 234578999999999888876542211 34689999886533210 00
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ +...|+.+|...+ ...|+++.+++|+.+.++..... ... .....+. ...|+ |
T Consensus 155 ---~----~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~---~~~~~~~--~~~p~---~- 217 (254)
T PRK06114 155 ---L----LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMV---HQTKLFE--EQTPM---Q- 217 (254)
T ss_pred ---C----CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cch---HHHHHHH--hcCCC---C-
Confidence 0 1234777665322 35689999999999987643211 110 0011111 11121 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
-+...+|+|+++++++... ...|+++.+.+|
T Consensus 218 --------r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg 250 (254)
T PRK06114 218 --------RMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGG 250 (254)
T ss_pred --------CCcCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence 1345788999888877532 234888877555
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.2e-09 Score=96.07 Aligned_cols=196 Identities=15% Similarity=0.151 Sum_probs=121.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---C-----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---W-----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~-----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++++++|++ +|++|+++.++.... . .....+. .+.+|++|.+++.++++++ . ++|+|
T Consensus 14 giG~~~a~~l~~------~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~l 85 (246)
T PRK12938 14 GIGTSICQRLHK------DGFKVVAGCGPNSPRRVKWLEDQKALGFDFI-ASEGNVGDWDSTKAAFDKVKAEVG-EIDVL 85 (246)
T ss_pred hHHHHHHHHHHH------cCCEEEEEcCCChHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHhC-CCCEE
Confidence 389999999999 899988865432110 0 0123466 7899999999887776542 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|+.... +.+.++++|+.++.++++++...++ ..+..+||++||..... + .
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~---------~------~-- 147 (246)
T PRK12938 86 VNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMV-ERGWGRIINISSVNGQK---------G------Q-- 147 (246)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCeEEEEEechhccC---------C------C--
Confidence 999985321 2356789999998888877765322 12567999998853211 0 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ ....|+.+|...+ ...++++.+++|+.+.+|......+. .+..+. ...++
T Consensus 148 -------~-~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~-----~~~~~~--~~~~~---- 208 (246)
T PRK12938 148 -------F-GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD-----VLEKIV--ATIPV---- 208 (246)
T ss_pred -------C-CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChH-----HHHHHH--hcCCc----
Confidence 0 1234776665322 34689999999999987643221111 111111 11121
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
..+...+++++++.+++..+ ...|+.+++.+|
T Consensus 209 --------~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 209 --------RRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred --------cCCcCHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence 12345778888888776432 235888888655
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.4e-09 Score=97.45 Aligned_cols=198 Identities=12% Similarity=-0.025 Sum_probs=122.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||.+++++|++ +|++|++++|++.+. . ....++. ++.+|++|++++.++++.+ . .+|+++|
T Consensus 18 iG~~ia~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~ 89 (254)
T PRK07478 18 IGRAAAKLFAR------EGAKVVVGARRQAELDQLVAEIRAEGGEAV-ALAGDVRDEAYAKALVALAVERFG-GLDIAFN 89 (254)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHhcC-CCCEEEE
Confidence 79999999999 899999999875431 0 0123577 8999999999887777642 2 2899999
Q ss_pred eeeecC---C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRL---K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+... . +.+..+++|+.++.++.+++...++.. +..+||++||...+... .
T Consensus 90 ~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~~~~~--------------~--- 151 (254)
T PRK07478 90 NAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVGHTAG--------------F--- 151 (254)
T ss_pred CCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHhhccC--------------C---
Confidence 998531 1 234578999998888877765432211 35689999886544210 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ ....|+.+|...+ ...++.+..++|+.|-.+.......... ....+ + ...++
T Consensus 152 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~-~-~~~~~----- 214 (254)
T PRK07478 152 ------P-GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPE---ALAFV-A-GLHAL----- 214 (254)
T ss_pred ------C-CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHH---HHHHH-H-hcCCC-----
Confidence 0 1234777775443 2457999999999886552111110000 00011 0 01111
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
..+...+++|+++++++..+. ..|+++.+..|
T Consensus 215 -------~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 248 (254)
T PRK07478 215 -------KRMAQPEEIAQAALFLASDAASFVTGTALLVDGG 248 (254)
T ss_pred -------CCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence 123467889999888875432 34787777544
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.9e-10 Score=101.73 Aligned_cols=146 Identities=15% Similarity=0.095 Sum_probs=101.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
.||++++++|++ +|++|++++|++.... ....+++ ++.+|++|.+++.++++.+ . ++|+|+|+|
T Consensus 11 ~iG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~~~-~id~vi~~a 82 (248)
T PRK10538 11 GFGECITRRFIQ------QGHKVIATGRRQERLQELKDELGDNLY-IAQLDVRNRAAIEEMLASLPAEWR-NIDVLVNNA 82 (248)
T ss_pred hHHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhccceE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 379999999999 8999999999754210 0124678 8999999999888777632 2 279999999
Q ss_pred eecC---C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 73 FQRL---K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 73 ~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
+... . +....+++|+.|+.++++++...++ ..+..+||++||...+. +.
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~-----------------~~--- 141 (248)
T PRK10538 83 GLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMV-ERNHGHIINIGSTAGSW-----------------PY--- 141 (248)
T ss_pred CccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECCcccCC-----------------CC---
Confidence 8531 1 2345789999998887777654322 12567899998864321 00
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
.+...|+.+|...+ ...++.+.+++|+.+.|+.
T Consensus 142 -----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 142 -----AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE 184 (248)
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence 01334776665433 3468999999999998753
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.7e-09 Score=96.10 Aligned_cols=197 Identities=12% Similarity=0.125 Sum_probs=121.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---C-----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---W-----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~-----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++++++|++ +|++|+++.|+.... . ....++. ++.+|++|++++.++++++ . ++|+|
T Consensus 11 ~iG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~v 82 (242)
T TIGR01829 11 GIGTAICQRLAK------DGYRVAANCGPNEERAEAWLQEQGALGFDFR-VVEGDVSSFESCKAAVAKVEAELG-PIDVL 82 (242)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCCHHHHHHHHHHHHhhCCceE-EEEecCCCHHHHHHHHHHHHHHcC-CCcEE
Confidence 379999999999 899999998842211 0 0124688 8999999999887776542 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||+|+.... +....+++|+.++.++++++...++ ..+.++||++||...+. | .
T Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~iss~~~~~---------~--------~ 144 (242)
T TIGR01829 83 VNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMR-ERGWGRIINISSVNGQK---------G--------Q 144 (242)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEcchhhcC---------C--------C
Confidence 999984321 2345678999999887777654322 12567899998853221 0 0
Q ss_pred CCCCCCCCCCCCcHHHHHHH--------Hh--cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIA--------AS--YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l--------~e--~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ ....|+.+|.. +. ...++++++++|+.+.++......... .. ... ...++
T Consensus 145 -------~-~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~--~~---~~~--~~~~~---- 205 (242)
T TIGR01829 145 -------F-GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDV--LN---SIV--AQIPV---- 205 (242)
T ss_pred -------C-CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHH--HH---HHH--hcCCC----
Confidence 0 12236666542 21 346899999999999876432211110 00 011 11121
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
..+...+++++++.+++..+. ..|+.+.+.+|.
T Consensus 206 --------~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 206 --------GRLGRPEEIAAAVAFLASEEAGYITGATLSINGGL 240 (242)
T ss_pred --------CCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence 123346678888777664432 348888887664
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.5e-10 Score=101.98 Aligned_cols=145 Identities=12% Similarity=-0.002 Sum_probs=100.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
.||.+|+++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+ . .+|+++|
T Consensus 13 gIG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~~g-~id~lv~ 84 (257)
T PRK07024 13 GIGQALAREYAR------QGATLGLVARRTDALQAFAARLPKAARVS-VYAADVRDADALAAAAADFIAAHG-LPDVVIA 84 (257)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHhcccCCeeE-EEEcCCCCHHHHHHHHHHHHHhCC-CCCEEEE
Confidence 379999999998 899999999875321 01112678 9999999999988876543 2 2799999
Q ss_pred eeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+.. .
T Consensus 85 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~~~~~~---------------~--- 145 (257)
T PRK07024 85 NAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASVAGVRG---------------L--- 145 (257)
T ss_pred CCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcCC---------------C---
Confidence 9985221 234578999999999888654332111 4568998887643210 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
| ....|+.+|...+ ...+++++++||+.|.++
T Consensus 146 ------~-~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 187 (257)
T PRK07024 146 ------P-GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTP 187 (257)
T ss_pred ------C-CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCc
Confidence 0 1223777665443 346899999999999875
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.8e-09 Score=98.29 Aligned_cols=148 Identities=12% Similarity=0.012 Sum_probs=102.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|++... . ....++. ++.+|+++.+++.++++.+ . ++|+|+
T Consensus 20 ~IG~~~a~~l~~------~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~li 91 (258)
T PRK06949 20 GLGARFAQVLAQ------AGAKVVLASRRVERLKELRAEIEAEGGAAH-VVSLDVTDYQSIKAAVAHAETEAG-TIDILV 91 (258)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHhcC-CCCEEE
Confidence 389999999998 899999999875321 0 0124678 8999999999888877642 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCC-------CccEEEEeccCccccccccCCcccCCcC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRS-------RLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~-------~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
|+|+.... +.+..+++|+.++.++++++...++... .-.++|++||...+..
T Consensus 92 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------ 159 (258)
T PRK06949 92 NNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV------------ 159 (258)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC------------
Confidence 99984221 2445789999999999998764321000 1258999988654321
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASS 181 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~ 181 (360)
. + +...|+.+|...+ ...+++++++||+.|++|..
T Consensus 160 -----~-------~-~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 160 -----L-------P-QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred -----C-------C-CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 0 0 1223776665433 23589999999999998754
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.5e-09 Score=97.40 Aligned_cols=200 Identities=11% Similarity=0.002 Sum_probs=125.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|+.... .. ...++. ++.+|++|.+++.++++.+ .. +|+|+
T Consensus 22 gIG~~la~~l~~------~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~~~-~d~li 93 (255)
T PRK06113 22 GIGKEIAITFAT------AGASVVVSDINADAANHVVDEIQQLGGQAF-ACRCDITSEQELSALADFALSKLGK-VDILV 93 (255)
T ss_pred hHHHHHHHHHHH------CCCeEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcCC-CCEEE
Confidence 379999999999 899999998864321 00 123567 8899999999887766542 32 79999
Q ss_pred EeeeecCC--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 70 WVMFQRLK--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 70 h~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
|+|+.... +.+..+++|+.++.++++++...++.. +..+||++||.+.+.. .
T Consensus 94 ~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~-----------------~-- 153 (255)
T PRK06113 94 NNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMAAENK-----------------N-- 153 (255)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCcEEEEEecccccCC-----------------C--
Confidence 99985321 223457999999999999987532101 2358999988643210 0
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+ +...|+.+|...+ ...++.+.++.|+.+--+....... +- ...... ...++
T Consensus 154 -----~-~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~-~~~~~~--~~~~~------ 215 (255)
T PRK06113 154 -----I-NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT---PE-IEQKML--QHTPI------ 215 (255)
T ss_pred -----C-CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccC---HH-HHHHHH--hcCCC------
Confidence 0 1223777776544 2357888888888776543211111 00 111111 11111
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 252 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~ 252 (360)
.-+...+|+++++++++.... ..|+++++.+|...
T Consensus 216 ------~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~~ 252 (255)
T PRK06113 216 ------RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQ 252 (255)
T ss_pred ------CCCcCHHHHHHHHHHHcCccccCccCCEEEECCCccc
Confidence 123467889999888875332 24899999887543
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.1e-10 Score=100.93 Aligned_cols=145 Identities=12% Similarity=0.101 Sum_probs=100.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+ . ++|+|
T Consensus 14 iG~~la~~l~~------~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~v 85 (248)
T PRK08251 14 LGAGMAREFAA------KGRDLALCARRTDRLEELKAELLARYPGIKVA-VAALDVNDHDQVFEVFAEFRDELG-GLDRV 85 (248)
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHhhCCCceEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 79999999999 899999999975321 00123578 8999999999887776643 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||+|+.... .....+++|+.++.++++++...++ ..+..+||++||...+.. .
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~---------------~-- 147 (248)
T PRK08251 86 IVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFR-EQGSGHLVLISSVSAVRG---------------L-- 147 (248)
T ss_pred EECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCeEEEEeccccccC---------------C--
Confidence 999985322 1234678999999999998864321 114678999988643210 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
|.+...|+.+|...+ ...++++++++|+.|.++
T Consensus 148 -------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~ 190 (248)
T PRK08251 148 -------PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSE 190 (248)
T ss_pred -------CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcch
Confidence 112334777775433 245799999999988664
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.7e-09 Score=96.99 Aligned_cols=197 Identities=12% Similarity=0.035 Sum_probs=122.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCC-CCC-----C--CCCCCceeeEeeccCChHHHHHHHccC--------C-C
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRP-PPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI--------S-Q 63 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~-~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~--------~-~ 63 (360)
.||++++++|++ .|++|++..++. ... . .....+. .+.+|++|.+++.+.++.+ . .
T Consensus 15 gIG~~ia~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (252)
T PRK12747 15 GIGRAIAKRLAN------DGALVAIHYGNRKEEAEETVYEIQSNGGSAF-SIGANLESLHGVEALYSSLDNELQNRTGST 87 (252)
T ss_pred hHHHHHHHHHHH------CCCeEEEEcCCCHHHHHHHHHHHHhcCCceE-EEecccCCHHHHHHHHHHHHHHhhhhcCCC
Confidence 489999999999 899998875432 110 0 0123466 7899999988765544321 0 0
Q ss_pred CccEEEEeeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCC
Q 037566 64 EVTHLFWVMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIG 134 (360)
Q Consensus 64 ~v~~V~h~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~ 134 (360)
++|+|+|+|+.... + .+..+++|+.|+.++++++...++ .-.+||++||...+..
T Consensus 88 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~---~~g~iv~isS~~~~~~------------- 151 (252)
T PRK12747 88 KFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR---DNSRIINISSAATRIS------------- 151 (252)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh---cCCeEEEECCcccccC-------------
Confidence 28999999985321 1 245678999999999999887532 1258999998754321
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCC
Q 037566 135 HDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLP 204 (360)
Q Consensus 135 ~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (360)
. + ....|+.+|...+ ...++.+..+.|+.|.++...+..... ......+ ...+
T Consensus 152 ----~-------~-~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~----~~~~~~~-~~~~ 214 (252)
T PRK12747 152 ----L-------P-DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDP----MMKQYAT-TISA 214 (252)
T ss_pred ----C-------C-CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCH----HHHHHHH-hcCc
Confidence 0 0 1234877776543 346899999999999887432211100 0000100 0011
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
...+.+.+|+|+++.+++.... ..|+.+.+.+|
T Consensus 215 ------------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg 249 (252)
T PRK12747 215 ------------FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG 249 (252)
T ss_pred ------------ccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCC
Confidence 1235678899999888765322 34788877655
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.5e-10 Score=100.11 Aligned_cols=146 Identities=10% Similarity=0.036 Sum_probs=102.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
.||.+++++|++ +|++|++++|++.... ....+++ ++++|++|++++.+.++++...+|.|+|.|
T Consensus 12 giG~~~a~~l~~------~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~d~vv~~a 84 (243)
T PRK07102 12 DIARACARRYAA------AGARLYLAARDVERLERLADDLRARGAVAVS-THELDILDTASHAAFLDSLPALPDIVLIAV 84 (243)
T ss_pred HHHHHHHHHHHh------cCCEEEEEeCCHHHHHHHHHHHHHhcCCeEE-EEecCCCChHHHHHHHHHHhhcCCEEEECC
Confidence 379999999999 8999999999764310 0124688 999999999999888776532268999998
Q ss_pred eecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... + ....+++|+.|+.++++++...++. .+..+||++||..... ..
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~~sS~~~~~---------------~~------ 142 (243)
T PRK07102 85 GTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEA-RGSGTIVGISSVAGDR---------------GR------ 142 (243)
T ss_pred cCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-CCCCEEEEEecccccC---------------CC------
Confidence 74211 2 2356799999999999998754321 1457899998753110 00
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
+ ....|+.+|...+ ...++++.+++|+.|+++
T Consensus 143 ---~-~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~ 184 (243)
T PRK07102 143 ---A-SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP 184 (243)
T ss_pred ---C-CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence 0 1223666664322 356899999999999875
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.5e-09 Score=98.69 Aligned_cols=145 Identities=10% Similarity=-0.045 Sum_probs=98.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||.+|+++|++ .|++|+++.|+.... . ....++. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 11 ~iG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~~~-~id~vi 82 (254)
T TIGR02415 11 GIGKGIAERLAK------DGFAVAVADLNEETAKETAKEINQAGGKAV-AYKLDVSDKDQVFSAIDQAAEKFG-GFDVMV 82 (254)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 379999999999 899999999874321 0 0134577 8999999999988776543 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc-ccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH-YMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+.... +.+..+++|+.++..+++++.+.++......+||++||... +|. |
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------~- 145 (254)
T TIGR02415 83 NNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN----------------P- 145 (254)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC----------------C-
Confidence 99985221 22456899999999888887654321212368999887532 221 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
..+.|+.+|...+ ...++.+.+++|+.+..+
T Consensus 146 ---------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~ 186 (254)
T TIGR02415 146 ---------ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTP 186 (254)
T ss_pred ---------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCh
Confidence 0223665554433 235799999999988654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.3e-09 Score=91.92 Aligned_cols=151 Identities=12% Similarity=0.144 Sum_probs=104.5
Q ss_pred HHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH---HHHHHh---c
Q 037566 89 MFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV---EDIAAS---Y 162 (360)
Q Consensus 89 gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~---ek~l~e---~ 162 (360)
-|..|.+|...+ -.-.|-+|++|+.++|-.. ....++|+++.. .+.|-. .++.+. .
T Consensus 107 ~t~~la~aI~~a---Pq~~~~~Vlv~gva~y~pS------------~s~eY~e~~~~q---gfd~~srL~l~WE~aA~~~ 168 (315)
T KOG3019|consen 107 VTSKLADAINNA---PQEARPTVLVSGVAVYVPS------------ESQEYSEKIVHQ---GFDILSRLCLEWEGAALKA 168 (315)
T ss_pred HHHHHHHHHhcC---CCCCCCeEEEEeeEEeccc------------cccccccccccC---ChHHHHHHHHHHHHHhhcc
Confidence 366788888775 2345689999999999632 234577877654 333332 233222 3
Q ss_pred CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCCCCCC
Q 037566 163 SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQ 242 (360)
Q Consensus 163 ~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~ 242 (360)
.....++++|.+.|.|-+-+ .+.++. .-|+. ..|.| .|++. +.+.++|++|++..+..|++.+... .
T Consensus 169 ~~~~r~~~iR~GvVlG~gGG-a~~~M~--lpF~~---g~GGP---lGsG~---Q~fpWIHv~DL~~li~~ale~~~v~-G 235 (315)
T KOG3019|consen 169 NKDVRVALIRIGVVLGKGGG-ALAMMI--LPFQM---GAGGP---LGSGQ---QWFPWIHVDDLVNLIYEALENPSVK-G 235 (315)
T ss_pred CcceeEEEEEEeEEEecCCc-chhhhh--hhhhh---ccCCc---CCCCC---eeeeeeehHHHHHHHHHHHhcCCCC-c
Confidence 45689999999999998643 233322 11211 23455 37887 5578999999999999999876544 5
Q ss_pred ceeccCCCcccHHHHHHHHHHHhCCCcc
Q 037566 243 AFNCTNGDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 243 ~yni~~g~~~s~~el~~~ia~~~g~~~~ 270 (360)
+.|-..+.+.+..|+.++++..++.+.-
T Consensus 236 ViNgvAP~~~~n~Ef~q~lg~aL~Rp~~ 263 (315)
T KOG3019|consen 236 VINGVAPNPVRNGEFCQQLGSALSRPSW 263 (315)
T ss_pred eecccCCCccchHHHHHHHHHHhCCCcc
Confidence 7788899999999999999999997654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.8e-09 Score=94.30 Aligned_cols=193 Identities=9% Similarity=-0.013 Sum_probs=121.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~- 77 (360)
||++++++|++ +|++|+++.|+.... .....+++ ++.+|++|.+++.+.++.... +|+++|+|+....
T Consensus 18 IG~~~a~~l~~------~G~~v~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id~li~~ag~~~~~ 89 (237)
T PRK12742 18 IGAAIVRRFVT------DGANVRFTYAGSKDAAERLAQETGAT-AVQTDSADRDAVIDVVRKSGA-LDILVVNAGIAVFG 89 (237)
T ss_pred HHHHHHHHHHH------CCCEEEEecCCCHHHHHHHHHHhCCe-EEecCCCCHHHHHHHHHHhCC-CcEEEECCCCCCCC
Confidence 89999999998 899998877643211 00112467 889999999988888876543 8999999984211
Q ss_pred --------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 78 --------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 78 --------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
+.+..+++|+.|+.+++.++.+.++ .-.++|++||..... .|. + +
T Consensus 90 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~g~iv~isS~~~~~----------------~~~-------~-~ 142 (237)
T PRK12742 90 DALELDADDIDRLFKINIHAPYHASVEAARQMP---EGGRIIIIGSVNGDR----------------MPV-------A-G 142 (237)
T ss_pred CcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh---cCCeEEEEecccccc----------------CCC-------C-C
Confidence 2356789999999999888776532 235899998853210 111 0 1
Q ss_pred CCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 150 NFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 150 ~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
...|+.+|...+ ...++.+.+++|+.+..+....... ....+. ...++ + -
T Consensus 143 ~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~------~~~~~~--~~~~~---~---------~ 202 (237)
T PRK12742 143 MAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP------MKDMMH--SFMAI---K---------R 202 (237)
T ss_pred CcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH------HHHHHH--hcCCC---C---------C
Confidence 334776665443 3468999999999887653211111 011111 11111 1 1
Q ss_pred ccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 220 MSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
+...+|+++++.+++.... ..|+.+++.+|
T Consensus 203 ~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 203 HGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred CCCHHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence 3467889998888765322 24777766444
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.6e-09 Score=95.62 Aligned_cols=197 Identities=12% Similarity=0.073 Sum_probs=123.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||.+++++|++ +|++|+.++|++... .. ...++. ++.+|++|++++.++++.+ . ++|.|+|
T Consensus 21 iG~~ia~~L~~------~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~ 92 (254)
T PRK08085 21 IGFLLATGLAE------YGAEIIINDITAERAELAVAKLRQEGIKAH-AAPFNVTHKQEVEAAIEHIEKDIG-PIDVLIN 92 (254)
T ss_pred HHHHHHHHHHH------cCCEEEEEcCCHHHHHHHHHHHHhcCCeEE-EEecCCCCHHHHHHHHHHHHHhcC-CCCEEEE
Confidence 79999999999 899999999875321 00 123567 8899999999887776542 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||..... + .
T Consensus 93 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~---------~--------~-- 152 (254)
T PRK08085 93 NAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR-QAGKIINICSMQSEL---------G--------R-- 152 (254)
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEccchhcc---------C--------C--
Confidence 9985321 234578999999999999887642211 356899998863211 0 0
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+ +...|+.+|...+ ...|+.+.+++|+.+..+.......... ....+. ...|+
T Consensus 153 -----~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~---~~~~~~--~~~p~------ 215 (254)
T PRK08085 153 -----D-TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEA---FTAWLC--KRTPA------ 215 (254)
T ss_pred -----C-CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHH---HHHHHH--hcCCC------
Confidence 0 1223666665433 3468999999999998874322111000 000111 11221
Q ss_pred ccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
.-+...+|+|++.++++... ...|++..+.+|
T Consensus 216 ------~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg 249 (254)
T PRK08085 216 ------ARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGG 249 (254)
T ss_pred ------CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 12446788988887777532 224666655444
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.2e-09 Score=95.93 Aligned_cols=198 Identities=13% Similarity=0.103 Sum_probs=123.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|++++.++++.+ . ++|+++|+|
T Consensus 20 IG~aia~~l~~------~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~iD~lv~~a 91 (251)
T PRK12481 20 LGQGMAIGLAK------AGADIVGVGVAEAPETQAQVEALGRKFH-FITADLIQQKDIDSIVSQAVEVMG-HIDILINNA 91 (251)
T ss_pred HHHHHHHHHHH------CCCEEEEecCchHHHHHHHHHHcCCeEE-EEEeCCCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 89999999999 999999988864221 0 0134677 8999999999988877642 2 289999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +.+..+++|+.++.++.+++...++....-.+||++||...|...
T Consensus 92 g~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~--------------------- 150 (251)
T PRK12481 92 GIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG--------------------- 150 (251)
T ss_pred CcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC---------------------
Confidence 85321 234578999999999999887643211112589999987654310
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
+ ....|+.+|...+ ...|+.+..++|+.|-.+......... .....+. ...|. +
T Consensus 151 ~----~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~---~~~~~~~--~~~p~---~---- 214 (251)
T PRK12481 151 I----RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADT---ARNEAIL--ERIPA---S---- 214 (251)
T ss_pred C----CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccCh---HHHHHHH--hcCCC---C----
Confidence 0 0123776665433 346899999999888554211110000 0000110 11111 1
Q ss_pred ccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
.+...+|+|+++.+++... ...|+...+.+|
T Consensus 215 -----~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 215 -----RWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred -----CCcCHHHHHHHHHHHhCccccCcCCceEEECCC
Confidence 2356788999988877532 234777766544
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.8e-09 Score=97.51 Aligned_cols=200 Identities=14% Similarity=0.060 Sum_probs=123.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... .. ...++. ++.+|++|.+++.++++.+ . .+|+|||
T Consensus 22 iG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~id~li~ 93 (278)
T PRK08277 22 LGGAMAKELAR------AGAKVAILDRNQEKAEAVVAEIKAAGGEAL-AVKADVLDKESLEQARQQILEDFG-PCDILIN 93 (278)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999998 899999999875321 00 123577 8999999998887766532 2 2799999
Q ss_pred eeeecCC------------------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCC
Q 037566 71 VMFQRLK------------------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDP 126 (360)
Q Consensus 71 ~A~~~~~------------------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~ 126 (360)
+|+.... +....+++|+.++..+++++.+.++.. +..+||++||...|...
T Consensus 94 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~~~---- 168 (278)
T PRK08277 94 GAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-KGGNIINISSMNAFTPL---- 168 (278)
T ss_pred CCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEccchhcCCC----
Confidence 9984211 234567899999988877765432211 34689999987655310
Q ss_pred cccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchh--HHHHHHH
Q 037566 127 SLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNS--LLTLAVY 194 (360)
Q Consensus 127 ~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~--~~~~~~~ 194 (360)
+ +...|+.+|...+ ...++.+.+++|+.|..+........ .......
T Consensus 169 --------------------~-~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 227 (278)
T PRK08277 169 --------------------T-KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERA 227 (278)
T ss_pred --------------------C-CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHH
Confidence 0 1223776665433 34689999999999988742211000 0000000
Q ss_pred HHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcC-CC--CCCCceeccCC
Q 037566 195 ATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATT-DR--AKNQAFNCTNG 249 (360)
Q Consensus 195 ~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~-~~--~~g~~yni~~g 249 (360)
..+. ...| ..-+...+|+|+++++++.. .. ..|+...+.+|
T Consensus 228 ~~~~--~~~p------------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 228 NKIL--AHTP------------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred HHHh--ccCC------------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 0000 1111 11245678899999887754 22 24787777555
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.5e-09 Score=86.48 Aligned_cols=188 Identities=11% Similarity=0.065 Sum_probs=119.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCChhH
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSEEI 81 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~~~ 81 (360)
+|++|+++.+. +||+|++++|++.... .-.++. .++.||.|++++.+.+.|. |.|+-.-+....+..+
T Consensus 12 ~Gs~i~~EA~~------RGHeVTAivRn~~K~~-~~~~~~-i~q~Difd~~~~a~~l~g~----DaVIsA~~~~~~~~~~ 79 (211)
T COG2910 12 AGSRILKEALK------RGHEVTAIVRNASKLA-ARQGVT-ILQKDIFDLTSLASDLAGH----DAVISAFGAGASDNDE 79 (211)
T ss_pred hHHHHHHHHHh------CCCeeEEEEeChHhcc-ccccce-eecccccChhhhHhhhcCC----ceEEEeccCCCCChhH
Confidence 69999999999 9999999999986532 126778 8999999999999999996 4554322222233323
Q ss_pred hhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC---CCCCcHHHHHH
Q 037566 82 NISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP---FPNFYYAVEDI 158 (360)
Q Consensus 82 ~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p---~p~~~Y~~ek~ 158 (360)
.. +...+.|++++..+ ++.|++.+.+++ ...++|...... .|.-||...+.
T Consensus 80 ~~---~k~~~~li~~l~~a-----gv~RllVVGGAG------------------SL~id~g~rLvD~p~fP~ey~~~A~~ 133 (211)
T COG2910 80 LH---SKSIEALIEALKGA-----GVPRLLVVGGAG------------------SLEIDEGTRLVDTPDFPAEYKPEALA 133 (211)
T ss_pred HH---HHHHHHHHHHHhhc-----CCeeEEEEcCcc------------------ceEEcCCceeecCCCCchhHHHHHHH
Confidence 22 22256677777765 789999886531 122333322111 23445553332
Q ss_pred HHh------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHH
Q 037566 159 AAS------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQI 231 (360)
Q Consensus 159 l~e------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~ 231 (360)
-+| ...+++||-+-|+..+-||.+. .+. ..|..+..--.+. +.++..|-|-+++
T Consensus 134 ~ae~L~~Lr~~~~l~WTfvSPaa~f~PGerTg~yr-------------lggD~ll~n~~G~------SrIS~aDYAiA~l 194 (211)
T COG2910 134 QAEFLDSLRAEKSLDWTFVSPAAFFEPGERTGNYR-------------LGGDQLLVNAKGE------SRISYADYAIAVL 194 (211)
T ss_pred HHHHHHHHhhccCcceEEeCcHHhcCCccccCceE-------------eccceEEEcCCCc------eeeeHHHHHHHHH
Confidence 222 3456999999999999998753 121 1234444433343 3455666777777
Q ss_pred HHHcCCCCCCCceec
Q 037566 232 WAATTDRAKNQAFNC 246 (360)
Q Consensus 232 ~a~~~~~~~g~~yni 246 (360)
--++++...+|.|-+
T Consensus 195 De~E~~~h~rqRftv 209 (211)
T COG2910 195 DELEKPQHIRQRFTV 209 (211)
T ss_pred HHHhcccccceeeee
Confidence 666777666777755
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3e-09 Score=101.16 Aligned_cols=188 Identities=11% Similarity=-0.006 Sum_probs=119.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|+++++++++.+ . ++|+++|
T Consensus 20 IG~~la~~la~------~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~-~v~~Dv~d~~~v~~~~~~~~~~~g-~iD~lIn 91 (334)
T PRK07109 20 VGRATARAFAR------RGAKVVLLARGEEGLEALAAEIRAAGGEAL-AVVADVADAEAVQAAADRAEEELG-PIDTWVN 91 (334)
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHHcCCcEE-EEEecCCCHHHHHHHHHHHHHHCC-CCCEEEE
Confidence 79999999999 899999999875321 0 0124577 8999999999988876542 2 2899999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++.+++...++.. +..+||++||...|...
T Consensus 92 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS~~~~~~~------------------- 151 (334)
T PRK07109 92 NAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGSALAYRSI------------------- 151 (334)
T ss_pred CCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCChhhccCC-------------------
Confidence 9985321 223467889888887777765543211 34689999998665310
Q ss_pred CCCCCCCCCCcHHHHHHHHh------------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 142 DSLRLPFPNFYYAVEDIAAS------------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e------------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
| ....|+.+|...+ ...++.+++++|+.|-.|.... .. . .+ ...+.
T Consensus 152 -----~-~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~----~~---~--~~---~~~~~---- 209 (334)
T PRK07109 152 -----P-LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW----AR---S--RL---PVEPQ---- 209 (334)
T ss_pred -----C-cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh----hh---h--hc---ccccc----
Confidence 0 1234777665322 1357999999999886652110 00 0 00 00010
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTN 248 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~ 248 (360)
....+.+.+++|+++++++.++ ++.++++.
T Consensus 210 ------~~~~~~~pe~vA~~i~~~~~~~---~~~~~vg~ 239 (334)
T PRK07109 210 ------PVPPIYQPEVVADAILYAAEHP---RRELWVGG 239 (334)
T ss_pred ------CCCCCCCHHHHHHHHHHHHhCC---CcEEEeCc
Confidence 0113456899999999998754 34455653
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.8e-10 Score=101.59 Aligned_cols=144 Identities=14% Similarity=0.079 Sum_probs=100.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeec
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~ 75 (360)
.||++++++|++ +|++|++++|+.... .....+++ ++.+|++|.+++.++++.+ . ++|.|+|+|+..
T Consensus 12 giG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~ 83 (274)
T PRK05693 12 GIGRALADAFKA------AGYEVWATARKAEDVEALAAAGFT-AVQLDVNDGAALARLAEELEAEHG-GLDVLINNAGYG 83 (274)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHCCCe-EEEeeCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCC
Confidence 379999999998 899999999875321 11123577 8999999999888777644 2 289999999842
Q ss_pred CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 76 LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 76 ~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
.. +.+..+++|+.|+.++++++...++ .+..++|++||...+.. .|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~g~iv~isS~~~~~~---------------~~-------- 138 (274)
T PRK05693 84 AMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLR--RSRGLVVNIGSVSGVLV---------------TP-------- 138 (274)
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh--hcCCEEEEECCccccCC---------------CC--------
Confidence 21 2345789999999999999865432 12357888887543210 00
Q ss_pred CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 147 PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
....|+.+|...+ ...|+.+++++|+.|..+
T Consensus 139 --~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 139 --FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred --CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 1233776665432 346899999999999765
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.4e-09 Score=97.86 Aligned_cols=202 Identities=12% Similarity=0.039 Sum_probs=124.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC----CCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF----PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~----~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|++... .. ...++. ++.+|++|++++.++++.+ . .+|++
T Consensus 19 IG~~~a~~l~~------~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~id~l 90 (260)
T PRK07063 19 IGAAIARAFAR------EGAAVALADLDAALAERAAAAIARDVAGARVL-AVPADVTDAASVAAAVAAAEEAFG-PLDVL 90 (260)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhccCCceEE-EEEccCCCHHHHHHHHHHHHHHhC-CCcEE
Confidence 79999999999 899999999865321 00 134577 8999999999888777642 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|+.... +.+..+++|+.++.++++++...++.. +..+||++||...+.. .
T Consensus 91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~-----------------~ 152 (260)
T PRK07063 91 VNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIASTHAFKI-----------------I 152 (260)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECChhhccC-----------------C
Confidence 999985311 234568999999999999987543211 3468999988643321 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchh-HHHHHHHHHHHhhcCCCeeee
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNS-LLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 208 (360)
+ ....|+.+|...+ ...|+.+..++|+.|-.+-....... ........... ...|+
T Consensus 153 -------~-~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~--- 219 (260)
T PRK07063 153 -------P-GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETL--ALQPM--- 219 (260)
T ss_pred -------C-CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHH--hcCCC---
Confidence 0 1223776665433 34689999999988855421110000 00000000000 01111
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
+ -+...+|+|.++++++.... ..|+...+.+|..
T Consensus 220 ~---------r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~ 255 (260)
T PRK07063 220 K---------RIGRPEEVAMTAVFLASDEAPFINATCITIDGGRS 255 (260)
T ss_pred C---------CCCCHHHHHHHHHHHcCccccccCCcEEEECCCee
Confidence 1 13457889999988875432 3478777765543
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.6e-09 Score=95.49 Aligned_cols=200 Identities=11% Similarity=0.014 Sum_probs=124.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|++... . ....++. ++.+|++|.+++.++++.+ . ++|+|+
T Consensus 18 ~iG~~ia~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~g-~id~li 89 (253)
T PRK06172 18 GIGRATALAFAR------EGAKVVVADRDAAGGEETVALIREAGGEAL-FVACDVTRDAEVKALVEQTIAAYG-RLDYAF 89 (253)
T ss_pred hHHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHhC-CCCEEE
Confidence 389999999998 899999999975321 0 0134578 8999999999888877654 2 279999
Q ss_pred EeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+.... +.++.+++|+.++.++++++...++ ..+..++|++||...++..
T Consensus 90 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~ii~~sS~~~~~~~----------------- 151 (253)
T PRK06172 90 NNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLML-AQGGGAIVNTASVAGLGAA----------------- 151 (253)
T ss_pred ECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECchhhccCC-----------------
Confidence 99985211 2345678999999888877654221 1134689999887655421
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ ....|+.+|...+ ...++.+.++.|+.|-.+.......... .....+. ...|+ +
T Consensus 152 -------~-~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~--~~~~~~~--~~~~~---~ 216 (253)
T PRK06172 152 -------P-KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADP--RKAEFAA--AMHPV---G 216 (253)
T ss_pred -------C-CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccCh--HHHHHHh--ccCCC---C
Confidence 0 1233776665433 2457999999998885543211100000 0000000 11111 1
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
-+...+++++.+++++... ...|+.+++.+|.
T Consensus 217 ---------~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 217 ---------RIGKVEEVASAVLYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred ---------CccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 1346788999988887643 2358888887664
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=4e-09 Score=95.67 Aligned_cols=198 Identities=11% Similarity=0.120 Sum_probs=123.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---C--CCCCCceeeEeeccCChHHHHHHHccCC----CCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---W--FPSSHVDHYITFDALDSTDTTQKLSSIS----QEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~--~~~~~v~~~v~gDl~d~~~l~~~l~~~~----~~v~~V~h~ 71 (360)
.||++++++|++ +|++|+.+.++.... . ....++. ++.+|++|++++.++++++. .++|.+||+
T Consensus 16 gIG~~la~~l~~------~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ 88 (253)
T PRK08642 16 GLGAAIARAFAR------EGARVVVNYHQSEDAAEALADELGDRAI-ALQADVTDREQVQAMFATATEHFGKPITTVVNN 88 (253)
T ss_pred cHHHHHHHHHHH------CCCeEEEEcCCCHHHHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 389999999998 899998876543221 0 0124678 89999999999888776531 027999999
Q ss_pred eeecC-------C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 72 MFQRL-------K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 72 A~~~~-------~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
|+... . +..+.+++|+.++.++++++...++ ..+..+||++||...+.
T Consensus 89 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~iss~~~~~---------------- 151 (253)
T PRK08642 89 ALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMR-EQGFGRIINIGTNLFQN---------------- 151 (253)
T ss_pred CCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHH-hcCCeEEEEECCccccC----------------
Confidence 97420 0 1234689999999999999875321 11346899998753211
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
+ . .|...|+.+|...+ ...++.+..++|+.+--+......+. ..+..+. ...|+
T Consensus 152 -~------~--~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~----~~~~~~~--~~~~~- 215 (253)
T PRK08642 152 -P------V--VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPD----EVFDLIA--ATTPL- 215 (253)
T ss_pred -C------C--CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCH----HHHHHHH--hcCCc-
Confidence 0 0 11234887776544 24679999999988855421111110 0111111 11121
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
..+.+.+|+++++++++..+ ...|+.+.+.+|
T Consensus 216 -----------~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 216 -----------RKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred -----------CCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 13567889999998887532 345888877655
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.8e-09 Score=94.04 Aligned_cols=197 Identities=13% Similarity=0.059 Sum_probs=118.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||+++++.|++ +|++|+++.++.... .. ...++. ++.+|++|.+++.++++.+ . ++|+|
T Consensus 13 giG~~la~~l~~------~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~l 84 (248)
T PRK06947 13 GIGRATAVLAAA------RGWSVGINYARDAAAAEETADAVRAAGGRAC-VVAGDVANEADVIAMFDAVQSAFG-RLDAL 84 (248)
T ss_pred cHHHHHHHHHHH------CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEEeccCCHHHHHHHHHHHHHhcC-CCCEE
Confidence 489999999998 899988766543211 00 124678 9999999999887776532 2 28999
Q ss_pred EEeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCC--CccEEEEeccCcc-ccccccCCcccCCcCCC
Q 037566 69 FWVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRS--RLRHVTLLMGTKH-YMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 69 ~h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~--~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~~~ 135 (360)
||+|+.... +.+..+++|+.++.++++++.+.++... +-.+||++||... +|.+
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~------------- 151 (248)
T PRK06947 85 VNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP------------- 151 (248)
T ss_pred EECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC-------------
Confidence 999985321 1234689999999999876654321000 0235999987643 2210
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcCCC
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGLP 204 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~~~ 204 (360)
. ....|+.+|...+ ...+++++++||+.+..|.... ..... .... ....|
T Consensus 152 ~------------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~-----~~~~--~~~~~ 212 (248)
T PRK06947 152 N------------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGR-----AARL--GAQTP 212 (248)
T ss_pred C------------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHH-----HHHH--hhcCC
Confidence 0 0112666655432 2358999999999998774211 01100 0000 01111
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
+ + -....+++++.+++++..+. ..|+.+.+.+|
T Consensus 213 ~---~---------~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 213 L---G---------RAGEADEVAETIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred C---C---------CCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence 1 1 12457889999888776543 34776666443
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.5e-09 Score=92.33 Aligned_cols=183 Identities=18% Similarity=0.136 Sum_probs=122.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h~A 72 (360)
||.+++++|.+ .|+.|+...|+.... .+....+. ....|++|++++.++++ .... +|.+++-|
T Consensus 18 iG~A~A~~l~~------~G~~vvl~aRR~drL~~la~~~~~~~~~-~~~~DVtD~~~~~~~i~~~~~~~g~-iDiLvNNA 89 (246)
T COG4221 18 IGEATARALAE------AGAKVVLAARREERLEALADEIGAGAAL-ALALDVTDRAAVEAAIEALPEEFGR-IDILVNNA 89 (246)
T ss_pred HHHHHHHHHHH------CCCeEEEEeccHHHHHHHHHhhccCceE-EEeeccCCHHHHHHHHHHHHHhhCc-ccEEEecC
Confidence 79999999999 999999999986532 11113567 89999999998666654 4443 89999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +++.++++|+.|+.|...|+...|... +-.+||.+||.+ | ..| .
T Consensus 90 Gl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~SiA------------G-----~~~----y 147 (246)
T COG4221 90 GLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIA------------G-----RYP----Y 147 (246)
T ss_pred CCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEecccc------------c-----ccc----C
Confidence 85321 456789999999999999987655422 334899998864 1 001 1
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
|. ..-|+.+|+.-. ...++.++.+-|+.|-..- ++ .+++.|+...
T Consensus 148 ---~~-~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~----~s-----------------~v~~~g~~~~ 202 (246)
T COG4221 148 ---PG-GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTE----FS-----------------TVRFEGDDER 202 (246)
T ss_pred ---CC-CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceeccee----cc-----------------cccCCchhhh
Confidence 11 334777776422 3578999999998774321 11 0112222221
Q ss_pred cc---ccccccCHHHHHHHHHHHHcCCCC
Q 037566 214 WE---HFCDMSDSRVLAEQQIWAATTDRA 239 (360)
Q Consensus 214 ~~---~~~d~~~v~dla~a~~~a~~~~~~ 239 (360)
.. .-...+..+|+|+++.+++..|..
T Consensus 203 ~~~~y~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 203 ADKVYKGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred HHHHhccCCCCCHHHHHHHHHHHHhCCCc
Confidence 10 123467899999999999987754
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.4e-09 Score=93.18 Aligned_cols=196 Identities=11% Similarity=0.056 Sum_probs=121.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeeccCChHHHHHHHccCC---CCccEEEEeeeecC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--FPSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFWVMFQRL 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--~~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h~A~~~~ 76 (360)
||++++++|++ +|++|++++|++.... ....+++ ++.+|++|++++.++++.+. ..+|+++|+|+...
T Consensus 14 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 86 (236)
T PRK06483 14 IGLALAWHLLA------QGQPVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWL 86 (236)
T ss_pred HHHHHHHHHHH------CCCeEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCcccc
Confidence 79999999998 8999999999764321 1123477 89999999998877765431 12799999998521
Q ss_pred C---------ChhHhhhhhHHHHHHHHHHHHhhccCCC-CccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 77 K---------SEEINISNNSTMFKNVMSVVVDSNKGRS-RLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 77 ~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~-~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
. +.+..+++|+.++..+.+++...++... +..++|++||..... + .
T Consensus 87 ~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------------~----~--- 142 (236)
T PRK06483 87 AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK-----------------G----S--- 142 (236)
T ss_pred CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-----------------C----C---
Confidence 1 2345779999999988888876433111 135799987753210 0 0
Q ss_pred CCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 147 PFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
+ ....|+.+|...+ ...++.+..++|+.+.-+. .. .... .... ....++..
T Consensus 143 ~-~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~-~~-~~~~-----~~~~--~~~~~~~~---------- 202 (236)
T PRK06483 143 D-KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNE-GD-DAAY-----RQKA--LAKSLLKI---------- 202 (236)
T ss_pred C-CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCC-CC-CHHH-----HHHH--hccCcccc----------
Confidence 0 1224887776544 2235999999999874221 11 0100 0001 01122211
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCceeccCCC
Q 037566 218 CDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGD 250 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~ 250 (360)
....+|+|+++.+++......|+++.+.+|.
T Consensus 203 --~~~~~~va~~~~~l~~~~~~~G~~i~vdgg~ 233 (236)
T PRK06483 203 --EPGEEEIIDLVDYLLTSCYVTGRSLPVDGGR 233 (236)
T ss_pred --CCCHHHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence 2246788888888876444568888776554
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.5e-09 Score=94.66 Aligned_cols=199 Identities=12% Similarity=0.113 Sum_probs=124.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccCCC---CccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSISQ---EVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~~~---~v~~V~h 70 (360)
.||++++++|++ +|++|++++|++... . ....++. ++.+|++|++++.++++++.. ++|+|+|
T Consensus 22 ~IG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~ 94 (256)
T PRK06124 22 GLGFEIARALAG------AGAHVLVNGRNAATLEAAVAALRAAGGAAE-ALAFDIADEEAVAAAFARIDAEHGRLDILVN 94 (256)
T ss_pred hHHHHHHHHHHH------cCCeEEEEeCCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 379999999998 899999999975321 0 0134578 999999999988877764311 2789999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.++.++.+++.+.++ ..+..+||++||...+.. ...
T Consensus 95 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~-----------------~~~ 156 (256)
T PRK06124 95 NVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMK-RQGYGRIIAITSIAGQVA-----------------RAG 156 (256)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEeechhccC-----------------CCC
Confidence 9984321 2345689999999999988865322 114578999988643211 000
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
...|+.+|...+ ...++.+.+++|+.+.++......... .....+. ...+
T Consensus 157 --------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~---~~~~~~~--~~~~------- 216 (256)
T PRK06124 157 --------DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADP---AVGPWLA--QRTP------- 216 (256)
T ss_pred --------ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccCh---HHHHHHH--hcCC-------
Confidence 122555443322 235899999999999987532111100 0111111 1111
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
...+.+.+++++++++++..+. ..|+.+.+.+|
T Consensus 217 -----~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg 251 (256)
T PRK06124 217 -----LGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGG 251 (256)
T ss_pred -----CCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCC
Confidence 1125678899999998876432 23776666444
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-08 Score=92.83 Aligned_cols=145 Identities=10% Similarity=-0.043 Sum_probs=98.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... .. ...++. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 13 iG~~ia~~l~~------~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~lI~ 84 (252)
T PRK07677 13 MGKAMAKRFAE------EGANVVITGRTKEKLEEAKLEIEQFPGQVL-TVQMDVRNPEDVQKMVEQIDEKFG-RIDALIN 84 (252)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHHhC-CccEEEE
Confidence 79999999999 899999999875321 00 124678 8999999999888776543 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++.+.++....-.+||++||...+.. .
T Consensus 85 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~---------------~---- 145 (252)
T PRK07677 85 NAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA---------------G---- 145 (252)
T ss_pred CCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC---------------C----
Confidence 9974211 23457899999999999999654221112357898887632210 0
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------c-CCCCcEEEEcCCCeeec
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------Y-SPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~-~~~~~~~ilRp~~vyGp 179 (360)
+. ...|+.+|...+ . ..|+.+..++|+.|..+
T Consensus 146 --~~----~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 146 --PG----VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred --CC----CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence 00 112555543322 2 35899999999998754
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=3e-09 Score=97.55 Aligned_cols=141 Identities=10% Similarity=0.038 Sum_probs=99.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~ 76 (360)
.||++++++|++ +|++|++++|++... ...++. ++.+|++|++++.++++.+ . ++|+|+|+|+...
T Consensus 20 gIG~~la~~l~~------~G~~v~~~~~~~~~~--~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~li~~Ag~~~ 89 (266)
T PRK06171 20 GIGLAIVKELLA------NGANVVNADIHGGDG--QHENYQ-FVPTDVSSAEEVNHTVAEIIEKFG-RIDGLVNNAGINI 89 (266)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCcccc--ccCceE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCcccC
Confidence 389999999999 899999999876542 234678 8999999999988777643 2 2799999998421
Q ss_pred C------------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 77 K------------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 77 ~------------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
. +.+..+++|+.|+.++++++...++.. +-.+||++||...+...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~---------------- 152 (266)
T PRK06171 90 PRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-HDGVIVNMSSEAGLEGS---------------- 152 (266)
T ss_pred CccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-CCcEEEEEccccccCCC----------------
Confidence 1 123478999999999999987643211 23579999886543210
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIII 177 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vy 177 (360)
+ ....|+.+|...+ ...++.+.+++|+.+-
T Consensus 153 --------~-~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 153 --------E-GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred --------C-CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 0 1234666654332 3468999999998874
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.7e-09 Score=99.65 Aligned_cols=175 Identities=14% Similarity=-0.040 Sum_probs=114.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--C-CCCCceeeEeeccCChHHHHHHHccCC---CCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--F-PSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--~-~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h~A~~~ 75 (360)
||++++++|++ +|++|++++|++.... . ....++ ++.+|++|++++.++++++. .++|.++|+|+..
T Consensus 17 iG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~ 89 (273)
T PRK07825 17 IGLATARALAA------LGARVAIGDLDEALAKETAAELGLVV-GGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVM 89 (273)
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhccce-EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 79999999999 8999999998753210 0 012478 89999999999877766431 1279999999853
Q ss_pred CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 76 LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 76 ~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
.. +....+++|+.|+.++++++...++ ..+..+||++||...+.. .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~-----------------~------- 144 (273)
T PRK07825 90 PVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMV-PRGRGHVVNVASLAGKIP-----------------V------- 144 (273)
T ss_pred CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCEEEEEcCccccCC-----------------C-------
Confidence 21 2345789999999998888765432 124578999998643321 0
Q ss_pred CCCCCcHHHHHHHH---------h-cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 147 PFPNFYYAVEDIAA---------S-YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 147 p~p~~~Y~~ek~l~---------e-~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
| ....|+.+|... | ...|+++++++|+.+-.+- . .+.+ +. .
T Consensus 145 ~-~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~----~---------------~~~~----~~-----~ 195 (273)
T PRK07825 145 P-GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL----I---------------AGTG----GA-----K 195 (273)
T ss_pred C-CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchh----h---------------cccc----cc-----c
Confidence 0 123366666422 1 4568999999998764321 0 0100 00 0
Q ss_pred cccccCHHHHHHHHHHHHcCC
Q 037566 217 FCDMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~ 237 (360)
....++.+|+|++++.++.++
T Consensus 196 ~~~~~~~~~va~~~~~~l~~~ 216 (273)
T PRK07825 196 GFKNVEPEDVAAAIVGTVAKP 216 (273)
T ss_pred CCCCCCHHHHHHHHHHHHhCC
Confidence 113577999999999887653
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.8e-09 Score=93.44 Aligned_cols=198 Identities=11% Similarity=-0.000 Sum_probs=122.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... .....++. .+.+|++|++++.++++.+ . ++|+++|
T Consensus 21 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~lv~ 92 (253)
T PRK05867 21 IGKRVALAYVE------AGAQVAIAARHLDALEKLADEIGTSGGKVV-PVCCDVSQHQQVTSMLDQVTAELG-GIDIAVC 92 (253)
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHHHHhC-CCCEEEE
Confidence 79999999999 899999999875321 00124577 8999999999988877642 2 2899999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.++.++++++...++....-.++|++||...+-. ..
T Consensus 93 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------------~~---- 154 (253)
T PRK05867 93 NAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII--------------NV---- 154 (253)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC--------------CC----
Confidence 9985321 22346789999999999998754321111246888877532100 00
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
|.....|+.+|...+ ...|+.+..++|+.|-.+....... ...... ...|+ |
T Consensus 155 -----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~------~~~~~~--~~~~~---~-- 216 (253)
T PRK05867 155 -----PQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE------YQPLWE--PKIPL---G-- 216 (253)
T ss_pred -----CCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH------HHHHHH--hcCCC---C--
Confidence 001234777665433 3468999999999886543211100 001111 11121 1
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
-+...+|+|+++++++.... ..|+++.+.+|.
T Consensus 217 -------r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 217 -------RLGRPEELAGLYLYLASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred -------CCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence 23467889999888775322 347888776553
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.5e-09 Score=94.12 Aligned_cols=197 Identities=10% Similarity=0.065 Sum_probs=123.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|++++|+.... .. ...++. ++.+|++|.+++.++++.+ . .+|+++|+
T Consensus 27 IG~~ia~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~g-~id~li~~ 98 (258)
T PRK06935 27 LGQGYAVALAK------AGADIIITTHGTNWDETRRLIEKEGRKVT-FVQVDLTKPESAEKVVKEALEEFG-KIDILVNN 98 (258)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEEC
Confidence 79999999999 899999998873210 00 134678 8999999999887777643 2 27999999
Q ss_pred eeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 72 MFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 72 A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+.... +.+..+++|+.++.++++++...++.. +..++|++||...|...
T Consensus 99 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~-------------------- 157 (258)
T PRK06935 99 AGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-GSGKIINIASMLSFQGG-------------------- 157 (258)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-CCeEEEEECCHHhccCC--------------------
Confidence 984221 234567899999998888876543211 35689999987655310
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
+ ....|+.+|...+ ...|+.+.+++|+.|..+........- .....+.+ ..+.
T Consensus 158 ----~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~---~~~~~~~~--~~~~------- 220 (258)
T PRK06935 158 ----K-FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADK---NRNDEILK--RIPA------- 220 (258)
T ss_pred ----C-CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccCh---HHHHHHHh--cCCC-------
Confidence 0 0123776665433 346899999999988765321111000 00001111 1110
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
.-+...+|+|..+.+++... ...|+++.+.+|
T Consensus 221 -----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg 254 (258)
T PRK06935 221 -----GRWGEPDDLMGAAVFLASRASDYVNGHILAVDGG 254 (258)
T ss_pred -----CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 12455678888888776532 234788877655
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.8e-08 Score=87.90 Aligned_cols=280 Identities=16% Similarity=0.153 Sum_probs=160.7
Q ss_pred chHHHHHHHhcCCCCCCCCcE-EEEEe-cCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee-c---
Q 037566 2 AGLSLAEALKNNPTIPGGPWK-VYGTA-RRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ-R--- 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~-V~~l~-r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~-~--- 75 (360)
+|..++..|.. .-|-+ |+.-+ ++|+...+ +.+ . ++..||.|...+++.+-... +|.+||..+. +
T Consensus 56 LG~~~A~LLR~-----~yGs~~VILSDI~KPp~~V~-~~G-P-yIy~DILD~K~L~eIVVn~R--IdWL~HfSALLSAvG 125 (366)
T KOG2774|consen 56 LGRGLASLLRY-----MYGSECVILSDIVKPPANVT-DVG-P-YIYLDILDQKSLEEIVVNKR--IDWLVHFSALLSAVG 125 (366)
T ss_pred HhHHHHHHHHH-----HhCCccEehhhccCCchhhc-ccC-C-chhhhhhccccHHHhhcccc--cceeeeHHHHHHHhc
Confidence 46677776654 13444 44433 33433222 112 4 89999999999999876554 7999998763 2
Q ss_pred CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 76 LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 76 ~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
..+-....+||++|..|+++.|.++ +++-|| -|+++++|... +..|...-+- ..|..-||.
T Consensus 126 E~NVpLA~~VNI~GvHNil~vAa~~-----kL~iFV-PSTIGAFGPtS-----------PRNPTPdltI--QRPRTIYGV 186 (366)
T KOG2774|consen 126 ETNVPLALQVNIRGVHNILQVAAKH-----KLKVFV-PSTIGAFGPTS-----------PRNPTPDLTI--QRPRTIYGV 186 (366)
T ss_pred ccCCceeeeecchhhhHHHHHHHHc-----CeeEee-cccccccCCCC-----------CCCCCCCeee--ecCceeech
Confidence 1233356799999999999999987 676444 37787777421 1222211111 124556999
Q ss_pred HHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHH
Q 037566 156 EDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAE 228 (360)
Q Consensus 156 ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~ 228 (360)
+|.-+| ...|++.-.+|...++.......-..-..+++|.-..+ +|+---+.-.. ....+.+..|+-+
T Consensus 187 SKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~-~gk~tCylrpd----trlpmmy~~dc~~ 261 (366)
T KOG2774|consen 187 SKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQ-KGKHTCYLRPD----TRLPMMYDTDCMA 261 (366)
T ss_pred hHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHH-cCCcccccCCC----ccCceeehHHHHH
Confidence 887666 45789999999998886432111111112233322211 33321111110 2235566777766
Q ss_pred HHHHHHcCCC--CCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcc
Q 037566 229 QQIWAATTDR--AKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKME 306 (360)
Q Consensus 229 a~~~a~~~~~--~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 306 (360)
+++..+..+. -..++||++ +-.+|-.|++.+|.+.+ +.+. ..... ...
T Consensus 262 ~~~~~~~a~~~~lkrr~ynvt-~~sftpee~~~~~~~~~----p~~~--i~y~~-----------------------~sr 311 (366)
T KOG2774|consen 262 SVIQLLAADSQSLKRRTYNVT-GFSFTPEEIADAIRRVM----PGFE--IDYDI-----------------------CTR 311 (366)
T ss_pred HHHHHHhCCHHHhhhheeeec-eeccCHHHHHHHHHhhC----CCce--eeccc-----------------------chh
Confidence 6666554443 246899995 56688888888887664 2110 00010 000
Q ss_pred cccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHH
Q 037566 307 EITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLR 354 (360)
Q Consensus 307 ~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~ 354 (360)
++ ....|.+.+|-+.||+ .-|+-.+++..-+.-.++.-+
T Consensus 312 q~---------iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~~~~ 351 (366)
T KOG2774|consen 312 QS---------IADSWPMSLDDSEARTEWHEKHSLHLLSIISTVVAVHK 351 (366)
T ss_pred hh---------hhhhcccccCchhHhhHHHHhhhhhHHHHHHHHHHHHH
Confidence 00 0114678899999976 588877777665555554433
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.8e-09 Score=109.35 Aligned_cols=211 Identities=10% Similarity=0.021 Sum_probs=126.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C----CCCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
.||++++++|++ +|++|++++|+.... . .....+. .+.+|++|++++.++++.+ . ++|+
T Consensus 425 gIG~aiA~~La~------~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~-~v~~Dvtd~~~v~~a~~~i~~~~g-~iDi 496 (676)
T TIGR02632 425 GIGRETARRLAA------EGAHVVLADLNLEAAEAVAAEINGQFGAGRAV-ALKMDVTDEQAVKAAFADVALAYG-GVDI 496 (676)
T ss_pred HHHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEE-EEECCCCCHHHHHHHHHHHHHhcC-CCcE
Confidence 389999999999 899999999875321 0 0113466 8899999999998887643 2 2799
Q ss_pred EEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 68 LFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 68 V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+|+|+.... +....+++|+.|..++..++...++....-.+||++||...+...
T Consensus 497 lV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~---------------- 560 (676)
T TIGR02632 497 VVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG---------------- 560 (676)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC----------------
Confidence 9999985321 124567899999888876665432211112479999885432100
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCee-ecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIII-GASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vy-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+ ....|+.+|...+ ...|+.+..++|+.|+ |.+.... .... ... +..+....-
T Consensus 561 --------~-~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~-~~~~----~~~--~~~~~~~~~ 624 (676)
T TIGR02632 561 --------K-NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDG-EWRE----ERA--AAYGIPADE 624 (676)
T ss_pred --------C-CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccc-cchh----hhh--hcccCChHH
Confidence 0 1335888776544 2358999999999987 4332110 0000 000 000100000
Q ss_pred eCC-cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 208 LGN-KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 208 ~G~-~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
.+. -.........++.+|+|+++++++... ...|+++++.+|..
T Consensus 625 ~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~ 671 (676)
T TIGR02632 625 LEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP 671 (676)
T ss_pred HHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence 000 000011234578899999998776532 23489999977754
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.6e-08 Score=91.91 Aligned_cols=198 Identities=10% Similarity=0.036 Sum_probs=122.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|+.... .. ....+. ++.+|+.|.+++.++++.+ . .+|+|+
T Consensus 19 gIG~~l~~~l~~------~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~li 90 (252)
T PRK07035 19 GIGEAIAKLLAQ------QGAHVIVSSRKLDGCQAVADAIVAAGGKAE-ALACHIGEMEQIDALFAHIRERHG-RLDILV 90 (252)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 389999999999 899999999875321 00 123467 8999999999887766543 2 279999
Q ss_pred EeeeecC-------CC---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRL-------KS---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~-------~~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+... .+ .+..+++|+.++.++++++.+.++.. +..+++++||...+. |.
T Consensus 91 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~-----------------~~ 152 (252)
T PRK07035 91 NNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-GGGSIVNVASVNGVS-----------------PG 152 (252)
T ss_pred ECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCcEEEEECchhhcC-----------------CC
Confidence 9997421 12 34578999999999998885542211 457899998753221 10
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ +.+.|+.+|...+ ...|+++..+.|+.|-.+-........ ..+.... ...| .
T Consensus 153 -------~-~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~---~~~~~~~--~~~~--~-- 215 (252)
T PRK07035 153 -------D-FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKND---AILKQAL--AHIP--L-- 215 (252)
T ss_pred -------C-CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCH---HHHHHHH--ccCC--C--
Confidence 0 1334777776554 245899999999887554211111100 1111111 1111 1
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
..+....++|+++.+++.... ..|+++++.+|
T Consensus 216 --------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 216 --------RRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred --------CCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 123457789998888765432 34787777543
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.8e-08 Score=90.70 Aligned_cols=146 Identities=12% Similarity=0.035 Sum_probs=97.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHcc----CCCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V 68 (360)
.||.+++++|++ +|++|++++|+.... . ....++. ++.+|++|.+++.++++. ... +|.+
T Consensus 9 giG~~~a~~l~~------~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~-i~~l 80 (239)
T TIGR01831 9 GIGRAIANRLAA------DGFEICVHYHSGRSDAESVVSAIQAQGGNAR-LLQFDVADRVACRTLLEADIAEHGA-YYGV 80 (239)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEE-EEEccCCCHHHHHHHHHHHHHHcCC-CCEE
Confidence 489999999999 899999988764321 0 0134688 999999999988777654 222 7899
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccc-cccccCCcccCCcCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHY-MGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vY-g~~~~~~~~~g~~~~~~~p 138 (360)
+|.|+.... +.+.++++|+.|+.++++++...+....+..+||++||.+.+ +.+
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------------- 144 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR---------------- 144 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC----------------
Confidence 999884211 344578999999999999864210001134689999885432 210
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
....|+.+|...+ ...+++++.++|+.+.++.
T Consensus 145 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 186 (239)
T TIGR01831 145 ----------GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM 186 (239)
T ss_pred ----------CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence 0122555554322 3468999999999987753
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.1e-09 Score=94.13 Aligned_cols=145 Identities=14% Similarity=0.052 Sum_probs=99.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeeccCChHHHHHHHcc-----C--CCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--FPSSHVDHYITFDALDSTDTTQKLSS-----I--SQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--~~~~~v~~~v~gDl~d~~~l~~~l~~-----~--~~~v~~V~h~ 71 (360)
.||++++++|++ +|++|++++|+..... ....++. ++.+|++|.+++.+++++ . ..++|+++|+
T Consensus 12 giG~~ia~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 84 (243)
T PRK07023 12 GLGAALAEQLLQ------PGIAVLGVARSRHPSLAAAAGERLA-EVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINN 84 (243)
T ss_pred chHHHHHHHHHh------CCCEEEEEecCcchhhhhccCCeEE-EEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEc
Confidence 389999999998 8999999998754311 1134688 899999999988775433 1 0127899999
Q ss_pred eeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 72 MFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 72 A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
|+.... +.+..+++|+.|+..+++++.+.++. .+..+||++||...+...
T Consensus 85 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~------------------- 144 (243)
T PRK07023 85 AGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASD-AAERRILHISSGAARNAY------------------- 144 (243)
T ss_pred CcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhc-cCCCEEEEEeChhhcCCC-------------------
Confidence 985321 23467799999988887777654321 135689999987544310
Q ss_pred CCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeee
Q 037566 142 DSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyG 178 (360)
.+...|+.+|...+ ...++.+.+++|+.+-.
T Consensus 145 ------~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 145 ------AGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred ------CCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence 01345888776554 13589999999987633
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.6e-09 Score=98.01 Aligned_cols=144 Identities=15% Similarity=0.016 Sum_probs=99.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h 70 (360)
||.+++++|++ +|++|++++|+.... .. ...++. ++.+|++|.+++.++++. .. ++|+|+|
T Consensus 52 IG~~la~~La~------~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~g-~id~li~ 123 (293)
T PRK05866 52 IGEAAAEQFAR------RGATVVAVARREDLLDAVADRITRAGGDAM-AVPCDLSDLDAVDALVADVEKRIG-GVDILIN 123 (293)
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 899999999975321 00 123577 899999999998887763 22 2799999
Q ss_pred eeeecCC-----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 71 VMFQRLK-----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 71 ~A~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +..++|++||.++++..
T Consensus 124 ~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~----------------- 185 (293)
T PRK05866 124 NAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATWGVLSEA----------------- 185 (293)
T ss_pred CCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhhcCCC-----------------
Confidence 9985321 113467899999999988876432211 45799999886544210
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeee
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyG 178 (360)
.| ....|+.+|...+ ...++.+++++|+.|-.
T Consensus 186 ---~p----~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T 227 (293)
T PRK05866 186 ---SP----LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVAT 227 (293)
T ss_pred ---CC----CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccC
Confidence 11 1234777775432 34689999999986644
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.8e-09 Score=103.39 Aligned_cols=197 Identities=13% Similarity=0.079 Sum_probs=126.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||.+++++|++ +|++|++++|++... .....++. .+.+|++|++++.++++.+ . .+|++||+|+
T Consensus 281 IG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~li~nAg 352 (520)
T PRK06484 281 IGRAVADRFAA------AGDRLLIIDRDAEGAKKLAEALGDEHL-SVQADITDEAAVESAFAQIQARWG-RLDVLVNNAG 352 (520)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhCCcee-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 79999999999 899999999875321 00123566 7899999999887777542 3 2899999998
Q ss_pred ecC---C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 74 QRL---K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 74 ~~~---~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
... . +.+.++++|+.|+.++++++...++ +-.+||++||...+.. .
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~-----------------~---- 408 (520)
T PRK06484 353 IAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS---QGGVIVNLGSIASLLA-----------------L---- 408 (520)
T ss_pred CcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc---cCCEEEEECchhhcCC-----------------C----
Confidence 531 1 2345789999999999999987642 2358999988654321 0
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
| +...|+.+|...+ ...|+++..+.|+.|..+......... .. .+..+.+ ..|+ +
T Consensus 409 ---~-~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~-~~-~~~~~~~--~~~~---~---- 473 (520)
T PRK06484 409 ---P-PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASG-RA-DFDSIRR--RIPL---G---- 473 (520)
T ss_pred ---C-CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhcccc-HH-HHHHHHh--cCCC---C----
Confidence 1 1334777765443 346899999999999776322111000 00 0111111 1121 1
Q ss_pred ccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
-+...+|+|+++++++..+ ...|+.+.+.+|.
T Consensus 474 -----~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~ 507 (520)
T PRK06484 474 -----RLGDPEEVAEAIAFLASPAASYVNGATLTVDGGW 507 (520)
T ss_pred -----CCcCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 2346888999988887533 2348888776553
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.2e-09 Score=95.92 Aligned_cols=145 Identities=9% Similarity=-0.031 Sum_probs=100.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----C-CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----W-FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~-~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
||++++++|++ .|++|+++++..... . .....+. ++.+|++|.+++.++++.+ . ++|+++|+|
T Consensus 22 IG~a~a~~l~~------~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~~D~li~~A 93 (253)
T PRK08993 22 LGQGMALGLAE------AGCDIVGINIVEPTETIEQVTALGRRFL-SLTADLRKIDGIPALLERAVAEFG-HIDILVNNA 93 (253)
T ss_pred HHHHHHHHHHH------CCCEEEEecCcchHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHhC-CCCEEEECC
Confidence 89999999999 899999887754221 0 0124577 8999999999888777642 2 289999999
Q ss_pred eecC---------CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRL---------KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~---------~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+... .+.+..+++|+.|+.++++++...++....-.++|++||...|... +
T Consensus 94 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------~----- 153 (253)
T PRK08993 94 GLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG---------------I----- 153 (253)
T ss_pred CCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC---------------C-----
Confidence 8532 1344678999999999999987643211112579999887655421 0
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
....|+.+|...+ ...|+.+..++|+.+--+
T Consensus 154 -----~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~ 194 (253)
T PRK08993 154 -----RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATN 194 (253)
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCc
Confidence 0123776665433 346899999999988654
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.1e-09 Score=108.05 Aligned_cols=146 Identities=9% Similarity=-0.073 Sum_probs=102.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccCC---CCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h 70 (360)
.||++++++|.+ +|++|++++|+..... ....++. ++.+|++|++++.++++.+. ..+|+|||
T Consensus 326 giG~~~a~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~ 398 (582)
T PRK05855 326 GIGRETALAFAR------EGAEVVASDIDEAAAERTAELIRAAGAVAH-AYRVDVSDADAMEAFAEWVRAEHGVPDIVVN 398 (582)
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 389999999999 8999999999753210 0124578 89999999999887776531 12799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++....-.+||++||.+.|+..
T Consensus 399 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------------- 459 (582)
T PRK05855 399 NAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS------------------- 459 (582)
T ss_pred CCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC-------------------
Confidence 9985321 234567899999999999876543211112589999998766421
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeee
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyG 178 (360)
+ ....|+.+|...+ ...|+.+++++|+.|-.
T Consensus 460 -----~-~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 460 -----R-SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDT 500 (582)
T ss_pred -----C-CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcc
Confidence 0 1234877776433 35689999999988744
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.3e-09 Score=92.83 Aligned_cols=147 Identities=10% Similarity=0.079 Sum_probs=99.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCCC-CccEEEEeeeecC--
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSISQ-EVTHLFWVMFQRL-- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~-~v~~V~h~A~~~~-- 76 (360)
.||++++++|++ +|++|++++|++... .....+++ ++.+|++|.+++.++++.+.. ++|+|+|+|+...
T Consensus 12 ~iG~~la~~L~~------~G~~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~~~~ 84 (222)
T PRK06953 12 GIGREFVRQYRA------DGWRVIATARDAAALAALQALGAE-ALALDVADPASVAGLAWKLDGEALDAAVYVAGVYGPR 84 (222)
T ss_pred chhHHHHHHHHh------CCCEEEEEECCHHHHHHHHhccce-EEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcccCC
Confidence 389999999998 899999999875432 11123578 899999999988886544321 3799999998531
Q ss_pred C---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc-cccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 77 K---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK-HYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 77 ~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~-vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
. +.+..+++|+.++.++++++...++. .-.+++++||.. +|+.. + .
T Consensus 85 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iv~isS~~~~~~~~---------------~----~--- 140 (222)
T PRK06953 85 TEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA--AGGVLAVLSSRMGSIGDA---------------T----G--- 140 (222)
T ss_pred CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc--cCCeEEEEcCcccccccc---------------c----C---
Confidence 0 23557899999999999999764211 124688887753 33310 0 0
Q ss_pred CCCCCcHHHHHHHHh--------cCCCCcEEEEcCCCeeec
Q 037566 147 PFPNFYYAVEDIAAS--------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e--------~~~~~~~~ilRp~~vyGp 179 (360)
.+.+.|+.+|...+ +..++.++.++|+.+.-+
T Consensus 141 -~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 141 -TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTD 180 (222)
T ss_pred -CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence 01123776665443 234788899999887654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.1e-08 Score=93.43 Aligned_cols=144 Identities=17% Similarity=0.143 Sum_probs=93.8
Q ss_pred chHHHHHHHhcCCCCCCC-CcEEEEEecCCCC-C------C--CCCCCceeeEeeccCChHHHHHHHccC---CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGG-PWKVYGTARRPPP-S------W--FPSSHVDHYITFDALDSTDTTQKLSSI---SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~-~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~---~~~v~~V 68 (360)
||.+++++|++ + |++|++++|++.. . . ....+++ ++.+|++|.+++.++++.+ . ++|++
T Consensus 20 iG~~la~~l~~------~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~-~~~~D~~~~~~~~~~~~~~~~~g-~id~l 91 (253)
T PRK07904 20 IGLAICERYLK------NAPARVVLAALPDDPRRDAAVAQMKAAGASSVE-VIDFDALDTDSHPKVIDAAFAGG-DVDVA 91 (253)
T ss_pred HHHHHHHHHHh------cCCCeEEEEeCCcchhHHHHHHHHHhcCCCceE-EEEecCCChHHHHHHHHHHHhcC-CCCEE
Confidence 79999999998 7 4899999997653 1 0 0123678 9999999998765554421 2 27999
Q ss_pred EEeeeecCC------Ch---hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK------SE---EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|.|+.... ++ .+.+++|+.++.++.+++...++.. +..+||++||...+. +
T Consensus 92 i~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS~~g~~-----------------~- 152 (253)
T PRK07904 92 IVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSSVAGER-----------------V- 152 (253)
T ss_pred EEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEechhhcC-----------------C-
Confidence 998875322 11 1357999998887544433222111 467999998864211 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
.+ +...|+.+|.... ...++++++++|+.|.-+
T Consensus 153 ---~~----~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~ 195 (253)
T PRK07904 153 ---RR----SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTR 195 (253)
T ss_pred ---CC----CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecc
Confidence 01 1234777665322 456899999999998753
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.8e-09 Score=95.93 Aligned_cols=146 Identities=12% Similarity=0.030 Sum_probs=99.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
.||++++++|++ +|++|++++|+.... . ....++. ++.+|++|++++.++++++ . .+|+|+|
T Consensus 17 giG~~la~~l~~------~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~~-~id~vi~ 88 (263)
T PRK08226 17 GIGEGIARVFAR------HGANLILLDISPEIEKLADELCGRGHRCT-AVVADVRDPASVAAAIKRAKEKEG-RIDILVN 88 (263)
T ss_pred hHHHHHHHHHHH------CCCEEEEecCCHHHHHHHHHHHHhCCceE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 389999999999 899999999875210 0 0124577 8999999999888777643 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.++.++++++...++.. +..+||++||+.... .+.
T Consensus 89 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~----------------~~~-- 149 (263)
T PRK08226 89 NAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR-KDGRIVMMSSVTGDM----------------VAD-- 149 (263)
T ss_pred CCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEECcHHhcc----------------cCC--
Confidence 9985211 123468999999999999987532111 346899998753210 000
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
+ ....|+.+|...+ ...++.+..++|+.+.++
T Consensus 150 -----~-~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~ 191 (263)
T PRK08226 150 -----P-GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTP 191 (263)
T ss_pred -----C-CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCH
Confidence 0 1234766665433 235899999999999886
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.9e-08 Score=91.50 Aligned_cols=203 Identities=11% Similarity=-0.030 Sum_probs=123.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|++++|+.... .. ...++. ++.+|++|++++.++++.+ . .+|+++|+
T Consensus 18 IG~aia~~l~~------~G~~vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~id~li~~ 89 (272)
T PRK08589 18 IGQASAIALAQ------EGAYVLAVDIAEAVSETVDKIKSNGGKAK-AYHVDISDEQQVKDFASEIKEQFG-RVDVLFNN 89 (272)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCcHHHHHHHHHHHhcCCeEE-EEEeecCCHHHHHHHHHHHHHHcC-CcCEEEEC
Confidence 79999999999 899999999872110 00 123578 8999999998887766543 2 27999999
Q ss_pred eeecCC-------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 72 MFQRLK-------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 72 A~~~~~-------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
|+.... + .+..+++|+.|+..+++++...++.. + .++|++||...+...
T Consensus 90 Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~~------------------- 148 (272)
T PRK08589 90 AGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ-G-GSIINTSSFSGQAAD------------------- 148 (272)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C-CEEEEeCchhhcCCC-------------------
Confidence 985321 1 23467899999998888877643212 3 589999887544210
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+ ....|+.+|...+ ...|+.+..+.|+.|..+...+....... ..............+
T Consensus 149 -----~-~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~----- 216 (272)
T PRK08589 149 -----L-YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSED-EAGKTFRENQKWMTP----- 216 (272)
T ss_pred -----C-CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchh-hHHHHHhhhhhccCC-----
Confidence 0 1224777775433 34689999999999876532111000000 000000000000000
Q ss_pred ccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..-+...+++|+++++++..+ ...|+.+.+.+|.
T Consensus 217 -----~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 217 -----LGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGV 252 (272)
T ss_pred -----CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence 112356888999988877532 2347877775553
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.4e-08 Score=90.38 Aligned_cols=196 Identities=9% Similarity=-0.009 Sum_probs=120.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|++++.++++.+ . ++|.|
T Consensus 30 IG~~ia~~l~~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~id~l 101 (262)
T PRK07831 30 IGSATARRALE------EGARVVISDIHERRLGETADELAAELGLGRVE-AVVCDVTSEAQVDALIDAAVERLG-RLDVL 101 (262)
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHHhcCCceEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 79999999999 899999998865321 0 1113577 8999999999888777643 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|+.... +....+++|+.++.++++++...++....-.+||++||...+- +.
T Consensus 102 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------------~~ 164 (262)
T PRK07831 102 VNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR-----------------AQ 164 (262)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------------CC
Confidence 999985321 2345678999999999999876432111134788877643211 00
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ +...|+.+|...+ ...++.+.+++|+.++.|........ .....+. ...++ +
T Consensus 165 -------~-~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~----~~~~~~~--~~~~~---~ 227 (262)
T PRK07831 165 -------H-GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSA----ELLDELA--AREAF---G 227 (262)
T ss_pred -------C-CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCH----HHHHHHH--hcCCC---C
Confidence 0 1234777665433 34689999999999988743211110 0111111 11221 1
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTN 248 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~ 248 (360)
-+...+|+|+++++++.... ..|+++.+.+
T Consensus 228 ---------r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~ 259 (262)
T PRK07831 228 ---------RAAEPWEVANVIAFLASDYSSYLTGEVVSVSS 259 (262)
T ss_pred ---------CCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence 13456789999888765332 3467665543
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1e-08 Score=89.15 Aligned_cols=204 Identities=14% Similarity=0.054 Sum_probs=130.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCC--CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWF--PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKS 78 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~ 78 (360)
++|+++++.-.+ .+++|-.+.|+.....+ ....+. |+++|.....-+...+.+ ++.++-+++. ..+
T Consensus 63 fsgs~vlk~A~~------vv~svgilsen~~k~~l~sw~~~vs-wh~gnsfssn~~k~~l~g----~t~v~e~~gg-fgn 130 (283)
T KOG4288|consen 63 FSGSEVLKNATN------VVHSVGILSENENKQTLSSWPTYVS-WHRGNSFSSNPNKLKLSG----PTFVYEMMGG-FGN 130 (283)
T ss_pred cchHHHHHHHHh------hceeeeEeecccCcchhhCCCcccc-hhhccccccCcchhhhcC----CcccHHHhcC-ccc
Confidence 579999999998 89999999987433211 135788 999999887777777777 4566555543 235
Q ss_pred hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHH
Q 037566 79 EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDI 158 (360)
Q Consensus 79 ~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~ 158 (360)
...+.++|-+...|-..|+.++ ++++|+|+| +..||.+ | .. |.. |-..|.
T Consensus 131 ~~~m~~ing~ani~a~kaa~~~-----gv~~fvyIS-a~d~~~~---------------~------~i--~rG-Y~~gKR 180 (283)
T KOG4288|consen 131 IILMDRINGTANINAVKAAAKA-----GVPRFVYIS-AHDFGLP---------------P------LI--PRG-YIEGKR 180 (283)
T ss_pred hHHHHHhccHhhHHHHHHHHHc-----CCceEEEEE-hhhcCCC---------------C------cc--chh-hhccch
Confidence 6678899998888888888887 899999995 3334321 1 11 233 444555
Q ss_pred HHh----cCCCCcEEEEcCCCeeecCCCCcch--hHH-HHHHHHHHHhhc---CCCeeeeCCcccccccccccCHHHHHH
Q 037566 159 AAS----YSPAVTYSVHRSSIIIGASSRSLNN--SLL-TLAVYATICRHQ---GLPFRYLGNKYTWEHFCDMSDSRVLAE 228 (360)
Q Consensus 159 l~e----~~~~~~~~ilRp~~vyGp~~~~~~~--~~~-~~~~~~~~~~~~---~~~~~~~G~~~~~~~~~d~~~v~dla~ 228 (360)
.+| ...++.-+|+||+.+||.+.-..+. +.. .-.++.. .+.. ...+++.|. -+...+.++++|.
T Consensus 181 ~AE~Ell~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~-~~~a~k~~~kLp~lg~-----l~~ppvnve~VA~ 254 (283)
T KOG4288|consen 181 EAEAELLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMV-LKFALKPLNKLPLLGP-----LLAPPVNVESVAL 254 (283)
T ss_pred HHHHHHHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHH-HHhhhchhhcCccccc-----ccCCCcCHHHHHH
Confidence 555 4556888999999999985422111 100 0011111 1111 112455565 3467888999999
Q ss_pred HHHHHHcCCCCCCCceeccCCCcccHHHHHHHH
Q 037566 229 QQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLL 261 (360)
Q Consensus 229 a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~i 261 (360)
+.+.|+.+|.-. ..+++.|+.+.-
T Consensus 255 aal~ai~dp~f~---------Gvv~i~eI~~~a 278 (283)
T KOG4288|consen 255 AALKAIEDPDFK---------GVVTIEEIKKAA 278 (283)
T ss_pred HHHHhccCCCcC---------ceeeHHHHHHHH
Confidence 888887766433 125566665443
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.7e-08 Score=95.71 Aligned_cols=180 Identities=13% Similarity=0.041 Sum_probs=117.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... . .....+. ++.+|++|++++.++++.+ . ++|++||
T Consensus 19 IG~aia~~la~------~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lVn 90 (330)
T PRK06139 19 IGQATAEAFAR------RGARLVLAARDEEALQAVAEECRALGAEVL-VVPTDVTDADQVKALATQAASFGG-RIDVWVN 90 (330)
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeeCCCHHHHHHHHHHHHHhcC-CCCEEEE
Confidence 79999999999 999999999875321 0 0123566 7899999999988876532 2 2899999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++.+++...++.. +-.+||++||...|.. .
T Consensus 91 nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS~~~~~~---------------~---- 150 (330)
T PRK06139 91 NVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMISLGGFAA---------------Q---- 150 (330)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcChhhcCC---------------C----
Confidence 9985221 123568999999999988876433211 2357898888654321 0
Q ss_pred CCCCCCCCCCcHHHHHHH----Hh------cC-CCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 142 DSLRLPFPNFYYAVEDIA----AS------YS-PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l----~e------~~-~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
| ....|+.+|.. .+ .. .++.++.+.|+.|..|...+..+. .+....
T Consensus 151 -----p-~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-------------~~~~~~---- 207 (330)
T PRK06139 151 -----P-YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-------------TGRRLT---- 207 (330)
T ss_pred -----C-CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-------------cccccc----
Confidence 1 02347777753 22 23 489999999999988743221110 000000
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~ 237 (360)
....+.+.+++|++++.++.++
T Consensus 208 -----~~~~~~~pe~vA~~il~~~~~~ 229 (330)
T PRK06139 208 -----PPPPVYDPRRVAKAVVRLADRP 229 (330)
T ss_pred -----CCCCCCCHHHHHHHHHHHHhCC
Confidence 0112457899999999888654
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.8e-08 Score=91.36 Aligned_cols=147 Identities=12% Similarity=0.002 Sum_probs=96.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccCC-------CCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSIS-------QEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~-------~~v~~V 68 (360)
.||++|+++|++ +|++|++++|++.+. .....+++ ++.+|++|++++.+.++.+. .+.+++
T Consensus 12 giG~~ia~~l~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK06924 12 GLGEAIANQLLE------KGTHVISISRTENKELTKLAEQYNSNLT-FHSLDLQDVHELETNFNEILSSIQEDNVSSIHL 84 (251)
T ss_pred hHHHHHHHHHHh------cCCEEEEEeCCchHHHHHHHhccCCceE-EEEecCCCHHHHHHHHHHHHHhcCcccCCceEE
Confidence 389999999999 899999999976221 01134688 89999999998887775431 012378
Q ss_pred EEeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 69 FWVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 69 ~h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
+|.|+.... +....+++|+.++..+++++...++...+.++||++||..++..
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------- 147 (251)
T PRK06924 85 INNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP----------------- 147 (251)
T ss_pred EEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC-----------------
Confidence 898875211 23356789999977777776554321123468999988643210
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh------------cCCCCcEEEEcCCCeeec
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS------------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e------------~~~~~~~~ilRp~~vyGp 179 (360)
. + +...|+.+|...+ ...++.+..++|+.+-.+
T Consensus 148 ~-------~-~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 148 Y-------F-GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred C-------C-CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 0 1 1334777665433 135789999999877543
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.5e-08 Score=89.50 Aligned_cols=198 Identities=11% Similarity=0.034 Sum_probs=118.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|+++.|+..+. .. ...++. ++.+|++|.+++.++++.+ . ++|+++
T Consensus 19 IG~~ia~~l~~------~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~~g-~id~lv 90 (261)
T PRK08936 19 LGRAMAVRFGK------EKAKVVINYRSDEEEANDVAEEIKKAGGEAI-AVKGDVTVESDVVNLIQTAVKEFG-TLDVMI 90 (261)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 899998888754221 00 124567 8899999999887776542 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.++.++++++...++....-.++|++||...+. |.
T Consensus 91 ~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----------------~~- 152 (261)
T PRK08936 91 NNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----------------PW- 152 (261)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----------------CC-
Confidence 99985321 2334679999988877766644321111135899998753221 10
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
| +...|+.+|...+ ...++.++.++|+.|..|.....+.... ....+. ...|+ +
T Consensus 153 ------~-~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~--~~~~~---~- 216 (261)
T PRK08936 153 ------P-LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPK---QRADVE--SMIPM---G- 216 (261)
T ss_pred ------C-CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHH---HHHHHH--hcCCC---C-
Confidence 1 1234776663322 3468999999999998774322111100 001110 11111 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
-+...+++++.+.+++..+. ..|+.+.+..|
T Consensus 217 --------~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g 249 (261)
T PRK08936 217 --------YIGKPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_pred --------CCcCHHHHHHHHHHHcCcccCCccCcEEEECCC
Confidence 24457788988888775432 24666655444
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.4e-08 Score=89.94 Aligned_cols=198 Identities=12% Similarity=0.059 Sum_probs=117.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC---CCCCceeeEeeccCChHHHH----HHHc----cCCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF---PSSHVDHYITFDALDSTDTT----QKLS----SISQ 63 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~---~~~~v~~~v~gDl~d~~~l~----~~l~----~~~~ 63 (360)
.||++++++|++ +|++|+++.|+.... .+ ....+. ++.+|++|.+++. +.++ ...
T Consensus 12 gIG~~~a~~l~~------~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~d~~~~~~~~~~~~~~~~~~~g- 83 (267)
T TIGR02685 12 RIGSSIAVALHQ------EGYRVVLHYHRSAAAASTLAAELNARRPNSAV-TCQADLSNSATLFSRCEAIIDACFRAFG- 83 (267)
T ss_pred cHHHHHHHHHHh------CCCeEEEEcCCcHHHHHHHHHHHHhccCCceE-EEEccCCCchhhHHHHHHHHHHHHHccC-
Confidence 389999999999 999999987653211 00 123456 7899999987543 3332 223
Q ss_pred CccEEEEeeeecCC------C--------------hhHhhhhhHHHHHHHHHHHHhhccCC-----CCccEEEEeccCcc
Q 037566 64 EVTHLFWVMFQRLK------S--------------EEINISNNSTMFKNVMSVVVDSNKGR-----SRLRHVTLLMGTKH 118 (360)
Q Consensus 64 ~v~~V~h~A~~~~~------~--------------~~~~~~vNv~gt~nll~a~~~~~~~~-----~~v~r~v~~SS~~v 118 (360)
++|+|+|+|+.... + ....+++|+.++.++++++...++.. ..-.+++.+||...
T Consensus 84 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~ 163 (267)
T TIGR02685 84 RCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMT 163 (267)
T ss_pred CceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhc
Confidence 28999999984211 1 23568999999999999876543211 01134666655321
Q ss_pred ccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhH
Q 037566 119 YMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSL 188 (360)
Q Consensus 119 Yg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~ 188 (360)
. .|. + +...|+.+|...+ ...|+.++.++|+.+..|.... ..
T Consensus 164 ~-----------------~~~-------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~--~~- 215 (267)
T TIGR02685 164 D-----------------QPL-------L-GFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP--FE- 215 (267)
T ss_pred c-----------------CCC-------c-ccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc--hh-
Confidence 1 110 1 1334887776544 3468999999999987663211 11
Q ss_pred HHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 189 LTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
...... ...+ + + ..+...+++++++++++..+ ...|+.+++.+|..
T Consensus 216 ----~~~~~~--~~~~--~-~--------~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~ 263 (267)
T TIGR02685 216 ----VQEDYR--RKVP--L-G--------QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLS 263 (267)
T ss_pred ----HHHHHH--HhCC--C-C--------cCCCCHHHHHHHHHHHhCcccCCcccceEEECCcee
Confidence 000110 1111 1 1 01346788999998887543 23478887766643
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.7e-08 Score=88.97 Aligned_cols=144 Identities=13% Similarity=0.013 Sum_probs=97.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC----CCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF----PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~----~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|++... .. ...++. .+.+|++|.+++.++++.+ . ++|+|
T Consensus 20 iG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~l 91 (265)
T PRK07062 20 IGLATVELLLE------AGASVAICGRDEERLASAEARLREKFPGARLL-AARCDVLDEADVAAFAAAVEARFG-GVDML 91 (265)
T ss_pred HHHHHHHHHHH------CCCeEEEEeCCHHHHHHHHHHHHhhCCCceEE-EEEecCCCHHHHHHHHHHHHHhcC-CCCEE
Confidence 79999999999 899999999975321 00 023577 8999999999887766543 3 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|+.... +....+++|+.+..++++++...++.. +..+||++||...+.. .
T Consensus 92 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~---------------~-- 153 (265)
T PRK07062 92 VNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNSLLALQP---------------E-- 153 (265)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEeccccccCC---------------C--
Confidence 999985321 234567899998888887776543211 3468999988653321 0
Q ss_pred CCCCCCCCCCCCcHHHHHHH--------H-h-cCCCCcEEEEcCCCeeec
Q 037566 140 KEDSLRLPFPNFYYAVEDIA--------A-S-YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l--------~-e-~~~~~~~~ilRp~~vyGp 179 (360)
| ....|+.+|.. + | ...|+.+..++|+.|--+
T Consensus 154 -------~-~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 154 -------P-HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred -------C-CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccc
Confidence 0 01225544432 2 2 346899999999888654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.3e-08 Score=93.34 Aligned_cols=198 Identities=12% Similarity=0.010 Sum_probs=124.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||.+++++|++ +|++|++++|++... .. ...++. ++.+|++|.+++.++++.+ . ++|+|+|
T Consensus 22 iG~~ia~~l~~------~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~li~ 93 (265)
T PRK07097 22 IGFAIAKAYAK------AGATIVFNDINQELVDKGLAAYRELGIEAH-GYVCDVTDEDGVQAMVSQIEKEVG-VIDILVN 93 (265)
T ss_pred HHHHHHHHHHH------CCCeEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHhCC-CCCEEEE
Confidence 79999999999 899999998875321 00 123577 8999999999988877542 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc-ccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH-YMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+.... +....+++|+.|+..+++++...++.. +..+||++||... +|.
T Consensus 94 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------- 153 (265)
T PRK07097 94 NAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINICSMMSELGR------------------- 153 (265)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCccccCCC-------------------
Confidence 9985321 234567899999999998887543211 4578999987531 110
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcch-----hHHHHHHHHHHHhhcCCCe
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNN-----SLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 205 (360)
+ +...|+.+|...+ ...++.+..++|+.|..+....... ...+. ...+. ...+
T Consensus 154 ------~-~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~--~~~~- 221 (265)
T PRK07097 154 ------E-TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPF--DQFII--AKTP- 221 (265)
T ss_pred ------C-CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhH--HHHHH--hcCC-
Confidence 0 1233776665433 3468999999999998874221100 00000 00010 0111
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..-+....|+|+.+++++..+ ...|+.+++.+|.
T Consensus 222 -----------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 257 (265)
T PRK07097 222 -----------AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGI 257 (265)
T ss_pred -----------ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence 012445788998888887642 2347777776554
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=5e-09 Score=94.22 Aligned_cols=191 Identities=13% Similarity=0.117 Sum_probs=120.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C-CCCCCceeeEeeccCChHHHHHHHccCCC---CccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W-FPSSHVDHYITFDALDSTDTTQKLSSISQ---EVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~---~v~~V~h~ 71 (360)
.||+++++.|++ +|++|++++|++... . ....+++ ++.+|++|++++.++++++.. .+|+++|+
T Consensus 16 ~iG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ 88 (238)
T PRK05786 16 GLGYAVAYFALK------EGAQVCINSRNENKLKRMKKTLSKYGNIH-YVVGDVSSTESARNVIEKAAKVLNAIDGLVVT 88 (238)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeE-EEECCCCCHHHHHHHHHHHHHHhCCCCEEEEc
Confidence 389999999998 899999999975421 0 0113578 899999999988877664310 26899999
Q ss_pred eeecCC-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 72 MFQRLK-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 72 A~~~~~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
++.... +.+..+++|+.+..++++++...++ .-.+||++||..... .+. +
T Consensus 89 ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~~ss~~~~~----------------~~~----~ 145 (238)
T PRK05786 89 VGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLK---EGSSIVLVSSMSGIY----------------KAS----P 145 (238)
T ss_pred CCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHh---cCCEEEEEecchhcc----------------cCC----C
Confidence 874321 1234678999999999998876532 124788887753210 000 0
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+...|+.+|...+ ...+++++++||+.++++-... . .+. ... .. +
T Consensus 146 ----~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~--~------~~~------~~~-~~-~----- 200 (238)
T PRK05786 146 ----DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE--R------NWK------KLR-KL-G----- 200 (238)
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch--h------hhh------hhc-cc-c-----
Confidence 1223776664332 3468999999999999863211 0 010 000 00 1
Q ss_pred cccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
...+...++++.+++++..+. ..|+.+.+.++
T Consensus 201 ---~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~ 234 (238)
T PRK05786 201 ---DDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGG 234 (238)
T ss_pred ---CCCCCHHHHHHHHHHHhcccccCccCCEEEECCc
Confidence 124557789999888876433 24777766443
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2e-08 Score=92.55 Aligned_cols=146 Identities=11% Similarity=-0.020 Sum_probs=97.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCC-CCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPS-SHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~-~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||.+++++|++ +|++|++++|++... .... ..+. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 12 iG~~la~~la~------~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~lv 83 (272)
T PRK07832 12 IGRATALRLAA------QGAELFLTDRDADGLAQTVADARALGGTVPE-HRALDISDYDAVAAFAADIHAAHG-SMDVVM 83 (272)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCCcce-EEEeeCCCHHHHHHHHHHHHHhcC-CCCEEE
Confidence 79999999998 899999999865321 0011 2244 6789999998877666542 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++......+||++||...+.. .
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~---------------~--- 145 (272)
T PRK07832 84 NIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA---------------L--- 145 (272)
T ss_pred ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC---------------C---
Confidence 99984211 23457899999999999998654321112468999988642210 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
|. ...|+.+|...+ ...++++++++|+.+.++.
T Consensus 146 ---~~----~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 146 ---PW----HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL 188 (272)
T ss_pred ---CC----CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 00 123666554221 3568999999999998874
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.2e-09 Score=107.30 Aligned_cols=144 Identities=16% Similarity=0.114 Sum_probs=103.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||.+++++|++ +|++|++++|++... . ....++. ++.+|++|.+++.++++.+ . .+|+|+|
T Consensus 383 iG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g-~id~li~ 454 (657)
T PRK07201 383 IGRATAIKVAE------AGATVFLVARNGEALDELVAEIRAKGGTAH-AYTCDLTDSAAVDHTVKDILAEHG-HVDYLVN 454 (657)
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHhcC-CCCEEEE
Confidence 79999999999 899999999975331 0 0124678 8999999999988877642 2 2799999
Q ss_pred eeeecCC-----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 71 VMFQRLK-----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 71 ~A~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||.+.|+..
T Consensus 455 ~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~----------------- 516 (657)
T PRK07201 455 NAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVSSIGVQTNA----------------- 516 (657)
T ss_pred CCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEECChhhcCCC-----------------
Confidence 9985211 234568999999999988876543212 45799999998766421
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
| ....|+.+|...+ ...++.+++++|+.|..+
T Consensus 517 -------~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~ 558 (657)
T PRK07201 517 -------P-RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTP 558 (657)
T ss_pred -------C-CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCccc
Confidence 0 1223777775543 346899999999998764
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.2e-08 Score=89.53 Aligned_cols=216 Identities=12% Similarity=0.006 Sum_probs=124.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC---CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI---SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~---~~~v~~V~h~ 71 (360)
||++++++| . +|++|++++|+.... .. ...++. ++.+|++|++++.++++.+ . .+|+|+|+
T Consensus 13 IG~~la~~l-~------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~i~~~~~~~~~~g-~id~li~n 83 (275)
T PRK06940 13 IGQAIARRV-G------AGKKVLLADYNEENLEAAAKTLREAGFDVS-TQEVDVSSRESVKALAATAQTLG-PVTGLVHT 83 (275)
T ss_pred HHHHHHHHH-h------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEeecCCHHHHHHHHHHHHhcC-CCCEEEEC
Confidence 899999998 4 689999999875321 00 123577 8999999999888777642 2 38999999
Q ss_pred eeecC--CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcccccc-ccCCcccCCcCCCC-CCCCCC----C
Q 037566 72 MFQRL--KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGP-VFDPSLVGQLIGHD-PPFKED----S 143 (360)
Q Consensus 72 A~~~~--~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~-~~~~~~~g~~~~~~-~p~~E~----~ 143 (360)
|+... .+.+.++++|+.|+.++++++...++.+ .++|++||.+..... .. ... ... ..++.. .
T Consensus 84 AG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---g~iv~isS~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~ 154 (275)
T PRK06940 84 AGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG---GAGVVIASQSGHRLPALT-----AEQ-ERALATTPTEELLSL 154 (275)
T ss_pred CCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC---CCEEEEEecccccCcccc-----hhh-hcccccccccccccc
Confidence 98642 3567789999999999999998754311 245566655432110 00 000 000 000110 0
Q ss_pred CCC-C----CCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 144 LRL-P----FPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 144 p~~-p----~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
+.. + .+...|+.+|...+ ...|+.+..+.|+.|-.+-.......... .....+. ...|+
T Consensus 155 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~-~~~~~~~--~~~p~--- 228 (275)
T PRK06940 155 PFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRG-DGYRNMF--AKSPA--- 228 (275)
T ss_pred ccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCch-HHHHHHh--hhCCc---
Confidence 100 0 01235887776533 34689999999998876521110000000 0000110 01111
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
| -+...+|+|+++.+++... ...|+.+.+.+|.
T Consensus 229 ~---------r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 229 G---------RPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred c---------cCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence 1 2456788999988877432 2347888776554
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=2e-08 Score=94.58 Aligned_cols=155 Identities=12% Similarity=0.030 Sum_probs=104.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||.+++++|++ +|++|++++|+.... ......+. ++.+|+.|.++++++++.+ . .+|++
T Consensus 26 IG~~~a~~La~------~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~d~~sv~~~~~~~~~~~~-~iD~l 97 (313)
T PRK05854 26 LGLGLARRLAA------AGAEVILPVRNRAKGEAAVAAIRTAVPDAKLS-LRALDLSSLASVAALGEQLRAEGR-PIHLL 97 (313)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceE-EEEecCCCHHHHHHHHHHHHHhCC-CccEE
Confidence 89999999998 899999999874321 00123578 8999999999988776542 2 38999
Q ss_pred EEeeeecCC--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 69 FWVMFQRLK--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 69 ~h~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|.|+.... ..+..+.+|+.|...|.+.+...++.+ -.|||++||.+.+.... ...+.+
T Consensus 98 i~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~-----------~~~~~~ 164 (313)
T PRK05854 98 INNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAI-----------NWDDLN 164 (313)
T ss_pred EECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCc-----------Cccccc
Confidence 999985321 234578999999888888876533212 35899998876543210 111233
Q ss_pred CCCCCCCCCCCcHHHHHHHHh--------c----CCCCcEEEEcCCCeeec
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS--------Y----SPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e--------~----~~~~~~~ilRp~~vyGp 179 (360)
++.+. .+...|+.+|+... + ..++.+..+.|+.|-.+
T Consensus 165 ~~~~~--~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 165 WERSY--AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred ccccC--cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 33332 23456888886543 1 24789999999988543
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-08 Score=93.55 Aligned_cols=197 Identities=11% Similarity=0.075 Sum_probs=121.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|++... .. ...++. ++.+|++|++++.++++++ . ++|.|+|
T Consensus 21 IG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i~~~~~~~~~~~~-~iD~vi~ 92 (264)
T PRK07576 21 INLGIAQAFAR------AGANVAVASRSQEKVDAAVAQLQQAGPEGL-GVSADVRDYAAVEAAFAQIADEFG-PIDVLVS 92 (264)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHhCCceE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 899999999875321 00 123567 8899999999888877653 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +....+++|+.|+.++++++...++.. + .+||++||...+..
T Consensus 93 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~-g~iv~iss~~~~~~-------------------- 150 (264)
T PRK07576 93 GAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-G-ASIIQISAPQAFVP-------------------- 150 (264)
T ss_pred CCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-C-CEEEEECChhhccC--------------------
Confidence 9873211 234567899999999999987642111 2 48999988643210
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC-CCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS-SRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+ ....|+.+|...+ ...++.++.++|+.+.+.. .....+.. .....+. ...| .
T Consensus 151 ----~~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~---~~~~~~~--~~~~--~--- 215 (264)
T PRK07576 151 ----MP-MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSP---ELQAAVA--QSVP--L--- 215 (264)
T ss_pred ----CC-CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCH---HHHHHHH--hcCC--C---
Confidence 01 1334777765433 2367999999999887532 11111100 0000010 0111 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
.......|+|+++++++..+. ..|+.+.+.+|.
T Consensus 216 -------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~ 250 (264)
T PRK07576 216 -------KRNGTKQDIANAALFLASDMASYITGVVLPVDGGW 250 (264)
T ss_pred -------CCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCc
Confidence 124567889999888875432 246766665543
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.1e-08 Score=88.54 Aligned_cols=148 Identities=15% Similarity=0.078 Sum_probs=98.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeeccCChHHHHHHHccCCC-CccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--FPSSHVDHYITFDALDSTDTTQKLSSISQ-EVTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--~~~~~v~~~v~gDl~d~~~l~~~l~~~~~-~v~~V~h~A~~~~~ 77 (360)
.||++++++|++ +|++|++++|++.... ....++. ++.+|++|+++++++++.+.. ++|+|||+|+....
T Consensus 12 ~iG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~~~ 84 (225)
T PRK08177 12 GLGLGLVDRLLE------RGWQVTATVRGPQQDTALQALPGVH-IEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGISGP 84 (225)
T ss_pred hHHHHHHHHHHh------CCCEEEEEeCCCcchHHHHhccccc-eEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcccCC
Confidence 379999999999 8999999999865421 1123577 889999999988877765421 37999999975311
Q ss_pred -----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 78 -----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 78 -----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
+....+.+|+.++.++++++...++ .+..+++++||. ||.. ..+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~~iv~~ss~--~g~~-------------~~~~~------ 141 (225)
T PRK08177 85 AHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVR--PGQGVLAFMSSQ--LGSV-------------ELPDG------ 141 (225)
T ss_pred CCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhh--hcCCEEEEEccC--cccc-------------ccCCC------
Confidence 2234678999999999999876432 123467877664 3321 00000
Q ss_pred CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 147 PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
.+...|+.+|...+ ...++.+..++|+.+-.+
T Consensus 142 -~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 142 -GEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred -CCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 11223776665444 246789999999887543
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.5e-08 Score=90.34 Aligned_cols=144 Identities=14% Similarity=0.011 Sum_probs=97.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccC---CCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSI---SQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~---~~~v~~V~h~ 71 (360)
.||.+|+++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+ . .+|+|+|+
T Consensus 16 ~iG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~-~id~lv~~ 87 (263)
T PRK09072 16 GIGQALAEALAA------AGARLLLVGRNAEKLEALAARLPYPGRHR-WVVADLTSEAGREAVLARAREMG-GINVLINN 87 (263)
T ss_pred hHHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHhcC-CCCEEEEC
Confidence 379999999999 899999999975321 00124678 9999999999887765532 2 27999999
Q ss_pred eeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 72 MFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 72 A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+.... +.+..+++|+.|+.++++++...++.. +..++|++||...+. | .
T Consensus 88 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~---------~------~----- 146 (263)
T PRK09072 88 AGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-PSAMVVNVGSTFGSI---------G------Y----- 146 (263)
T ss_pred CCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEecChhhCc---------C------C-----
Confidence 985321 224567899999999999987543211 245788887753221 0 0
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeee
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyG 178 (360)
+ ....|+.+|...+ ...++.++.+.|+.+..
T Consensus 147 ----~-~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t 187 (263)
T PRK09072 147 ----P-GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRT 187 (263)
T ss_pred ----C-CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccc
Confidence 0 1234776665422 34678999999987754
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.3e-08 Score=89.81 Aligned_cols=143 Identities=10% Similarity=-0.026 Sum_probs=96.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--------------CCCCCceeeEeeccCChHHHHHHHccC----C
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--------------FPSSHVDHYITFDALDSTDTTQKLSSI----S 62 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--------------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~ 62 (360)
.||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ .
T Consensus 17 gIG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~g 89 (273)
T PRK08278 17 GIGLAIALRAAR------DGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQAL-PLVGDVRDEDQVAAAVAKAVERFG 89 (273)
T ss_pred hHHHHHHHHHHH------CCCEEEEEecccccccchhhHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHhC
Confidence 489999999999 8999999998753210 0123567 8899999999888777643 2
Q ss_pred CCccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcC
Q 037566 63 QEVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 63 ~~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
. +|+|||+|+.... +.+..+++|+.|+.++++++...++.. +-.+++++||....
T Consensus 90 ~-id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~-------------- 153 (273)
T PRK08278 90 G-IDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS-ENPHILTLSPPLNL-------------- 153 (273)
T ss_pred C-CCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc-CCCEEEEECCchhc--------------
Confidence 2 8999999985321 234577899999999999997643211 22468887764210
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSI 175 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~ 175 (360)
.. .. ..+...|+.+|...+ ...++.++.+.|+.
T Consensus 154 -~~-----~~---~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 154 -DP-----KW---FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred -cc-----cc---cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 00 00 012345887776554 34579999999873
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.1e-07 Score=87.06 Aligned_cols=197 Identities=10% Similarity=-0.008 Sum_probs=116.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC---CCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF---PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~---~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|+.+.|+..+. .. ...++. ++.+|++|++++.++++.+ . .+|++
T Consensus 20 IG~~ia~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~l 91 (260)
T PRK08416 20 IGKAIVYEFAQ------SGVNIAFTYNSNVEEANKIAEDLEQKYGIKAK-AYPLNILEPETYKELFKKIDEDFD-RVDFF 91 (260)
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHhcC-CccEE
Confidence 79999999999 899998887643211 00 124678 8999999999888777643 2 27999
Q ss_pred EEeeeecC-------C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcC
Q 037566 69 FWVMFQRL-------K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 69 ~h~A~~~~-------~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
+|+|+... . +....+++|+.+...+.+++...++.. +-.+||++||...+.
T Consensus 92 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------- 157 (260)
T PRK08416 92 ISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIISLSSTGNLV------------- 157 (260)
T ss_pred EECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEEEecccccc-------------
Confidence 99997421 0 123467888888777776665432211 345899998853211
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGL 203 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~ 203 (360)
+. | ....|+.+|...+ ...|+.+..+.|+.+--+-.....+... ...... ...
T Consensus 158 ----~~-------~-~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~---~~~~~~--~~~ 220 (260)
T PRK08416 158 ----YI-------E-NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEE---VKAKTE--ELS 220 (260)
T ss_pred ----CC-------C-CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHH---HHHHHH--hcC
Confidence 00 0 0123666665433 3468999999997764331111001000 000010 111
Q ss_pred CeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 204 PFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 204 ~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
|+ .-+...+|+|.++++++..+ ...|+.+.+.+|
T Consensus 221 ~~------------~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 221 PL------------NRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred CC------------CCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 11 12456888999988877532 235788877554
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.3e-08 Score=90.67 Aligned_cols=144 Identities=14% Similarity=0.049 Sum_probs=98.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC---CCCCceeeEeeccCChHHHHHHHccC---CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF---PSSHVDHYITFDALDSTDTTQKLSSI---SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~---~~~~v~~~v~gDl~d~~~l~~~l~~~---~~~v~~V~h 70 (360)
||.+++++|++ +|++|++++|+.... .+ ...++. ++.+|++|++++.++++.+ . .+|+++|
T Consensus 20 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i~~~~~~~~~~g-~iD~lv~ 91 (263)
T PRK08339 20 IGFGVARVLAR------AGADVILLSRNEENLKKAREKIKSESNVDVS-YIVADLTKREDLERTVKELKNIG-EPDIFFF 91 (263)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhhcCCceE-EEEecCCCHHHHHHHHHHHHhhC-CCcEEEE
Confidence 79999999999 899999999874321 00 134678 8999999999888777643 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
.|+.... +.+..+++|+.+...+.+++...++.. +..++|++||...+.. .
T Consensus 92 nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS~~~~~~---------------~---- 151 (263)
T PRK08339 92 STGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTSVAIKEP---------------I---- 151 (263)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCccccCC---------------C----
Confidence 9984211 234578999998888877776543312 3468999998753321 0
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
| ....|+.+|...+ ...|+.+..+.|+.|-.+
T Consensus 152 -----~-~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 152 -----P-NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD 193 (263)
T ss_pred -----C-cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence 0 0123555443222 456899999999888553
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.7e-08 Score=92.95 Aligned_cols=143 Identities=13% Similarity=-0.039 Sum_probs=99.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC-CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF-PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~-~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|++++|+.... .. ....+. .+.+|++|.+++.++++.+ . ++|+|+|+
T Consensus 21 IG~~ia~~l~~------~G~~V~~~~r~~~~l~~~~~~l~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~id~vI~n 92 (296)
T PRK05872 21 IGAELARRLHA------RGAKLALVDLEEAELAALAAELGGDDRVL-TVVADVTDLAAMQAAAEEAVERFG-GIDVVVAN 92 (296)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhcCCCcEE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEEC
Confidence 79999999998 899999999875321 01 123455 6679999999988877643 2 28999999
Q ss_pred eeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 72 MFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 72 A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+.... + .+..+++|+.|+.++++++...++. +-.+||++||...+.. .
T Consensus 93 AG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~--~~g~iv~isS~~~~~~---------------~----- 150 (296)
T PRK05872 93 AGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIE--RRGYVLQVSSLAAFAA---------------A----- 150 (296)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCEEEEEeCHhhcCC---------------C-----
Confidence 985321 2 2456899999999999998754211 2258999988754421 0
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
| ....|+.+|...+ ...++.+.++.|+.+..+
T Consensus 151 ----~-~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~ 192 (296)
T PRK05872 151 ----P-GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTD 192 (296)
T ss_pred ----C-CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccch
Confidence 0 1234887775443 346899999999888665
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.1e-08 Score=90.70 Aligned_cols=144 Identities=9% Similarity=-0.025 Sum_probs=97.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
.||++++++|++ +|++|++++|+.... . ....++. ++.+|++|.+++.++++.+ .. +|+++|+|
T Consensus 16 gIG~~ia~~l~~------~G~~V~~~~r~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~-id~li~~A 87 (262)
T TIGR03325 16 GLGRAIVDRFVA------EGARVAVLDKSAAGLQELEAAHGDAVV-GVEGDVRSLDDHKEAVARCVAAFGK-IDCLIPNA 87 (262)
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHhhcCCceE-EEEeccCCHHHHHHHHHHHHHHhCC-CCEEEECC
Confidence 389999999999 899999999875321 0 0124577 8999999998887776543 22 79999999
Q ss_pred eecC---C-----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 73 FQRL---K-----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 73 ~~~~---~-----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
+... . +.+..+++|+.++.++++++...++.. + .++|++||...+..
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~-g~iv~~sS~~~~~~----------------- 148 (262)
T TIGR03325 88 GIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-R-GSVIFTISNAGFYP----------------- 148 (262)
T ss_pred CCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-C-CCEEEEeccceecC-----------------
Confidence 8421 1 123578999999999999997753211 2 46888776543210
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeec
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp 179 (360)
. + ....|+.+|...+ ....+.+..+.|+.|..+
T Consensus 149 ~-------~-~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~ 190 (262)
T TIGR03325 149 N-------G-GGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSD 190 (262)
T ss_pred C-------C-CCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCC
Confidence 0 0 1223776665443 223488999999988654
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.1e-08 Score=88.97 Aligned_cols=145 Identities=12% Similarity=-0.049 Sum_probs=94.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccC--ChHHHHHHHccC----CCCcc
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDAL--DSTDTTQKLSSI----SQEVT 66 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~--d~~~l~~~l~~~----~~~v~ 66 (360)
.||.+++++|++ .|++|++++|++... .....++. ++.+|++ +.+++.++++.+ . ++|
T Consensus 23 ~iG~~la~~l~~------~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~-~id 94 (247)
T PRK08945 23 GIGREAALTYAR------HGATVILLGRTEEKLEAVYDEIEAAGGPQPA-IIPLDLLTATPQNYQQLADTIEEQFG-RLD 94 (247)
T ss_pred hHHHHHHHHHHH------CCCcEEEEeCCHHHHHHHHHHHHhcCCCCce-EEEecccCCCHHHHHHHHHHHHHHhC-CCC
Confidence 489999999999 899999999975321 01123567 7888886 555555544322 2 279
Q ss_pred EEEEeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 67 HLFWVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 67 ~V~h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
+|||+|+.... ..+..+++|+.|+.++++++...++ ..+.++||++||...+..
T Consensus 95 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~-~~~~~~iv~~ss~~~~~~--------------- 158 (247)
T PRK08945 95 GVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLL-KSPAASLVFTSSSVGRQG--------------- 158 (247)
T ss_pred EEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH-hCCCCEEEEEccHhhcCC---------------
Confidence 99999974211 2345789999999999998854221 125689999988643210
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
. + ....|+.+|...+ ...++.+++++|+.+-.+
T Consensus 159 ~------~----~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 159 R------A----NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred C------C----CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence 0 0 0223777775444 335788889999877543
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.8e-08 Score=91.49 Aligned_cols=111 Identities=14% Similarity=0.146 Sum_probs=80.1
Q ss_pred chHHHHHHHhcCCCCCCCC-cEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGP-WKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||.+++++|++ +| ++|++++|+.... .. ....+. ++.+|++|.++++++++.+ . .+|+++
T Consensus 15 IG~aia~~L~~------~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~~-~iD~lI 86 (314)
T TIGR01289 15 LGLYAAKALAA------TGEWHVIMACRDFLKAEQAAKSLGMPKDSYT-IMHLDLGSLDSVRQFVQQFRESGR-PLDALV 86 (314)
T ss_pred HHHHHHHHHHH------cCCCEEEEEeCCHHHHHHHHHHhcCCCCeEE-EEEcCCCCHHHHHHHHHHHHHhCC-CCCEEE
Confidence 79999999999 89 9999999865321 01 124577 8899999999887776543 2 289999
Q ss_pred EeeeecCC-------C---hhHhhhhhHHHHHHHHHHHHhhccCCC-CccEEEEeccCcccc
Q 037566 70 WVMFQRLK-------S---EEINISNNSTMFKNVMSVVVDSNKGRS-RLRHVTLLMGTKHYM 120 (360)
Q Consensus 70 h~A~~~~~-------~---~~~~~~vNv~gt~nll~a~~~~~~~~~-~v~r~v~~SS~~vYg 120 (360)
|.|+.... + .+..+++|+.|+..+.+++...++... +-.|||++||...+.
T Consensus 87 ~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~ 148 (314)
T TIGR01289 87 CNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNT 148 (314)
T ss_pred ECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcccc
Confidence 99985211 2 234679999999988888766443121 236999999988764
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=3e-08 Score=90.71 Aligned_cols=143 Identities=10% Similarity=-0.016 Sum_probs=98.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|++.... ....++. ++.+|++|.+++.++++.+ . .+|+++|+|+
T Consensus 18 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~li~~ag 89 (263)
T PRK06200 18 IGRALVERFLA------EGARVAVLERSAEKLASLRQRFGDHVL-VVEGDVTSYADNQRAVDQTVDAFG-KLDCFVGNAG 89 (263)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhCCcce-EEEccCCCHHHHHHHHHHHHHhcC-CCCEEEECCC
Confidence 89999999999 8999999998753210 0123577 8999999998887776543 2 2899999998
Q ss_pred ecC---C----C-------hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 74 QRL---K----S-------EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 74 ~~~---~----~-------~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
... . + .+..+++|+.++.++++++...++.. -.++|++||.+.|...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~----------------- 150 (263)
T PRK06200 90 IWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFYPG----------------- 150 (263)
T ss_pred CcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEECChhhcCCC-----------------
Confidence 521 1 1 23467899999999999987643211 2479999887654310
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeec
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp 179 (360)
+ ....|+.+|...+ ...++.+..+.|+.|.-+
T Consensus 151 -------~-~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~ 191 (263)
T PRK06200 151 -------G-GGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTD 191 (263)
T ss_pred -------C-CCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccC
Confidence 0 1224777665433 123589999999888654
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.1e-07 Score=85.59 Aligned_cols=146 Identities=12% Similarity=-0.057 Sum_probs=94.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCCh--HHHHHHHc----cC-CCCc
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDS--TDTTQKLS----SI-SQEV 65 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~--~~l~~~l~----~~-~~~v 65 (360)
.||.+|+++|++ +|++|++++|++... ......+. ++.+|+.|. +++.++++ .. . .+
T Consensus 17 giG~~la~~l~~------~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~i~~~~~~-~i 88 (239)
T PRK08703 17 GLGEQVAKAYAA------AGATVILVARHQKKLEKVYDAIVEAGHPEPF-AIRFDLMSAEEKEFEQFAATIAEATQG-KL 88 (239)
T ss_pred cHHHHHHHHHHH------cCCEEEEEeCChHHHHHHHHHHHHcCCCCcc-eEEeeecccchHHHHHHHHHHHHHhCC-CC
Confidence 489999999998 899999999976421 00123466 789999863 34433332 22 2 27
Q ss_pred cEEEEeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCC
Q 037566 66 THLFWVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 66 ~~V~h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
|+|+|+|+.... +....+++|+.|+.++++++.+.++.. +-.++|++||....
T Consensus 89 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~ss~~~~---------------- 151 (239)
T PRK08703 89 DGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-PDASVIFVGESHGE---------------- 151 (239)
T ss_pred CEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-CCCEEEEEeccccc----------------
Confidence 999999985211 223467999999999999986643211 24588988774211
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh----------cC-CCCcEEEEcCCCeeecC
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS----------YS-PAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~-~~~~~~ilRp~~vyGp~ 180 (360)
.|. + ....|+.+|...+ .. .++.+++++|+.|++|.
T Consensus 152 -~~~-------~-~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 152 -TPK-------A-YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ 198 (239)
T ss_pred -cCC-------C-CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence 010 0 1234777665543 12 36999999999999874
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.76 E-value=7.1e-08 Score=81.82 Aligned_cols=137 Identities=13% Similarity=0.024 Sum_probs=93.8
Q ss_pred CchHHHHHHHhcCCCCCCCCc-EEEEEecCCCCCC----------CCCCCceeeEeeccCChHHHHHHHccC----CCCc
Q 037566 1 MAGLSLAEALKNNPTIPGGPW-KVYGTARRPPPSW----------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEV 65 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~-~V~~l~r~~~~~~----------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v 65 (360)
.||.+++++|++ +|. .|+.+.|++.... ....++. ++.+|+++++++.++++.+ . .+
T Consensus 11 ~iG~~~~~~l~~------~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~i 82 (180)
T smart00822 11 GLGLELARWLAE------RGARHLVLLSRSGPDAPGAAELLAELEALGAEVT-VVACDVADRAALAAALAAIPARLG-PL 82 (180)
T ss_pred hHHHHHHHHHHH------hhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHcC-Ce
Confidence 379999999998 786 5888888653321 0123567 8999999998887766543 2 27
Q ss_pred cEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc-ccccccCCcccCCcCCC
Q 037566 66 THLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH-YMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 66 ~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~~~ 135 (360)
|+|+|+|+.... +.+..+++|+.++.++++++.+. +.++++++||... |+.
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~ii~~ss~~~~~~~-------------- 143 (180)
T smart00822 83 RGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-----PLDFFVLFSSVAGVLGN-------------- 143 (180)
T ss_pred eEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-----CcceEEEEccHHHhcCC--------------
Confidence 999999984221 23456899999999999999764 5788999887532 211
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh------cCCCCcEEEEcCCCe
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS------YSPAVTYSVHRSSII 176 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~v 176 (360)
+ ....|+.+|...+ ...+++++.+.|+.+
T Consensus 144 --------~----~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 144 --------P----GQANYAAANAFLDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred --------C----CchhhHHHHHHHHHHHHHHHhcCCceEEEeeccc
Confidence 0 0123666655433 456888888887654
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.6e-07 Score=82.11 Aligned_cols=144 Identities=10% Similarity=0.008 Sum_probs=94.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC--------C--------CC--CCCCceeeEeeccCChHHHHHHHcc---
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP--------S--------WF--PSSHVDHYITFDALDSTDTTQKLSS--- 60 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~--------~--------~~--~~~~v~~~v~gDl~d~~~l~~~l~~--- 60 (360)
||.+++++|++ +|++|+++.|.... . .. ...++. ++.+|++|.+++.++++.
T Consensus 20 iG~~~a~~l~~------~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~D~~~~~~i~~~~~~~~~ 92 (256)
T PRK12859 20 IGAAICKELAE------AGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVS-SMELDLTQNDAPKELLNKVTE 92 (256)
T ss_pred hHHHHHHHHHH------CCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHH
Confidence 89999999999 89999887542100 0 00 123567 889999999988777653
Q ss_pred -CCCCccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccC
Q 037566 61 -ISQEVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVG 130 (360)
Q Consensus 61 -~~~~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g 130 (360)
... +|+|||.|+.... +.+..+++|+.|...+..++...++.. +-.+||++||...+.
T Consensus 93 ~~g~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~---------- 160 (256)
T PRK12859 93 QLGY-PHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK-SGGRIINMTSGQFQG---------- 160 (256)
T ss_pred HcCC-CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCeEEEEEcccccCC----------
Confidence 222 7999999985321 233468999999999877765443211 235899998864321
Q ss_pred CcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 131 QLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 131 ~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
+. + +...|+.+|...+ ...++.++.++|+.+-.+
T Consensus 161 -------~~-------~-~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~ 204 (256)
T PRK12859 161 -------PM-------V-GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTG 204 (256)
T ss_pred -------CC-------C-CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCC
Confidence 00 1 1234777665443 346899999999877553
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.5e-07 Score=81.55 Aligned_cols=195 Identities=7% Similarity=-0.022 Sum_probs=120.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||..++++|++ +|++|++.+|+.... ......+. ++.+|++|++++.++++.+ . .+|+++|.|+
T Consensus 21 IG~a~a~~la~------~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~lv~nAg 92 (252)
T PRK06079 21 IAWGCAQAIKD------QGATVIYTYQNDRMKKSLQKLVDEEDL-LVECDVASDESIERAFATIKERVG-KIDGIVHAIA 92 (252)
T ss_pred hHHHHHHHHHH------CCCEEEEecCchHHHHHHHhhccCcee-EEeCCCCCHHHHHHHHHHHHHHhC-CCCEEEEccc
Confidence 79999999999 899999998863210 11124577 8999999999887766532 3 2899999998
Q ss_pred ecC------C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 74 QRL------K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 74 ~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
... + +.+..+++|+.+...+++++...++ .-.++|++||.+.. .+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~---~~g~Iv~iss~~~~-----------------~~~- 151 (252)
T PRK06079 93 YAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN---PGASIVTLTYFGSE-----------------RAI- 151 (252)
T ss_pred ccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc---cCceEEEEeccCcc-----------------ccC-
Confidence 531 1 2344679999999999999876542 12578888875311 010
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
| ....|+.+|...+ ...|+.+..+.|+.|-.+-........ ....... ...|. +
T Consensus 152 ------~-~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~---~~~~~~~--~~~p~---~- 215 (252)
T PRK06079 152 ------P-NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHK---DLLKESD--SRTVD---G- 215 (252)
T ss_pred ------C-cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChH---HHHHHHH--hcCcc---c-
Confidence 1 1234776665332 346899999999988654211111100 0111111 11121 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
.+...+|+|+++.+++... ...|++..+.+|
T Consensus 216 --------r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 216 --------VGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred --------CCCCHHHHHHHHHHHhCcccccccccEEEeCCc
Confidence 2455788999988887532 234777766544
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.6e-07 Score=92.99 Aligned_cols=143 Identities=8% Similarity=-0.017 Sum_probs=95.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccCC---CCccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h~A~~ 74 (360)
||..++++|.+ +|++|++++|+..... ....+.+ ++.+|++|.+++.++++.+. .++|.|||+|+.
T Consensus 222 IG~~la~~l~~------~Ga~vi~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~ 294 (450)
T PRK08261 222 IGAAIAEVLAR------DGAHVVCLDVPAAGEALAAVANRVGGT-ALALDITAPDAPARIAEHLAERHGGLDIVVHNAGI 294 (450)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCccHHHHHHHHHHcCCe-EEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 79999999998 8999999988532210 0112456 88999999998877765331 027999999985
Q ss_pred cCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 75 RLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 75 ~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
... +.+..+++|+.|+.++.+++...+. ...-.+||++||...+...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~g~iv~~SS~~~~~g~----------------------- 350 (450)
T PRK08261 295 TRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGA-LGDGGRIVGVSSISGIAGN----------------------- 350 (450)
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh-hcCCCEEEEECChhhcCCC-----------------------
Confidence 321 2345689999999999999976310 0122689999886433110
Q ss_pred CCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCee
Q 037566 146 LPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIII 177 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vy 177 (360)
+ ....|+.+|...+ ...++.+..+.|+.+-
T Consensus 351 -~-~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~ 390 (450)
T PRK08261 351 -R-GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIE 390 (450)
T ss_pred -C-CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCc
Confidence 0 1233777665211 3468999999998763
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.3e-07 Score=80.24 Aligned_cols=170 Identities=12% Similarity=0.085 Sum_probs=113.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC----
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK---- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~---- 77 (360)
||.+++++|.+ + ++|++++|++ . .+.+|++|+++++++++.+.. +|+|+|+|+....
T Consensus 12 iG~~la~~l~~------~-~~vi~~~r~~----------~-~~~~D~~~~~~~~~~~~~~~~-id~lv~~ag~~~~~~~~ 72 (199)
T PRK07578 12 IGRAVVAELSK------R-HEVITAGRSS----------G-DVQVDITDPASIRALFEKVGK-VDAVVSAAGKVHFAPLA 72 (199)
T ss_pred HHHHHHHHHHh------c-CcEEEEecCC----------C-ceEecCCChHHHHHHHHhcCC-CCEEEECCCCCCCCchh
Confidence 79999999998 7 8999998853 2 578899999999998887653 8999999984221
Q ss_pred -----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCc
Q 037566 78 -----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFY 152 (360)
Q Consensus 78 -----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~ 152 (360)
+....+++|+.|+.++++++...++ .-.+|+++||..... +. | ....
T Consensus 73 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~g~iv~iss~~~~~-----------------~~-------~-~~~~ 124 (199)
T PRK07578 73 EMTDEDFNVGLQSKLMGQVNLVLIGQHYLN---DGGSFTLTSGILSDE-----------------PI-------P-GGAS 124 (199)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcccccCC-----------------CC-------C-CchH
Confidence 2334678999999999999876432 225788887753210 00 1 1234
Q ss_pred HHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCH
Q 037566 153 YAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDS 223 (360)
Q Consensus 153 Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v 223 (360)
|+.+|...+ ...++.+..++|+.+-. . +.. .+.. +++. ..+..
T Consensus 125 Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t----~-~~~-------------~~~~--~~~~--------~~~~~ 176 (199)
T PRK07578 125 AATVNGALEGFVKAAALELPRGIRINVVSPTVLTE----S-LEK-------------YGPF--FPGF--------EPVPA 176 (199)
T ss_pred HHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccC----c-hhh-------------hhhc--CCCC--------CCCCH
Confidence 776664332 23579999999976622 1 110 0100 1221 24678
Q ss_pred HHHHHHHHHHHcCCCCCCCceecc
Q 037566 224 RVLAEQQIWAATTDRAKNQAFNCT 247 (360)
Q Consensus 224 ~dla~a~~~a~~~~~~~g~~yni~ 247 (360)
+++|++++.++.. ...|++|+++
T Consensus 177 ~~~a~~~~~~~~~-~~~g~~~~~~ 199 (199)
T PRK07578 177 ARVALAYVRSVEG-AQTGEVYKVG 199 (199)
T ss_pred HHHHHHHHHHhcc-ceeeEEeccC
Confidence 8999988877754 4568888764
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.7e-07 Score=88.06 Aligned_cols=194 Identities=9% Similarity=-0.066 Sum_probs=118.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHccC---CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSSI---SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~---~~~v~~V~ 69 (360)
.||++++++|++ +|++|++.+++.... . ....++. ++.+|++|++++.++++.+ . ++|+||
T Consensus 23 gIG~~ia~~L~~------~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~-~~~~Dv~d~~~~~~~~~~~~~~g-~iD~li 94 (306)
T PRK07792 23 GLGRAEALGLAR------LGATVVVNDVASALDASDVLDEIRAAGAKAV-AVAGDISQRATADELVATAVGLG-GLDIVV 94 (306)
T ss_pred hHHHHHHHHHHH------CCCEEEEecCCchhHHHHHHHHHHhcCCeEE-EEeCCCCCHHHHHHHHHHHHHhC-CCCEEE
Confidence 389999999999 899999988753221 0 0134677 8999999998887766532 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCC------CCccEEEEeccCccccccccCCcccCCcCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGR------SRLRHVTLLMGTKHYMGPVFDPSLVGQLIG 134 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~------~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~ 134 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. ..-.+||++||.+.+...
T Consensus 95 ~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 162 (306)
T PRK07792 95 NNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP------------ 162 (306)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC------------
Confidence 99985321 234578999999999999886432100 012489999886533210
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCC
Q 037566 135 HDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLP 204 (360)
Q Consensus 135 ~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (360)
+ ....|+.+|...+ ..+|+.+..+.|+. ...+... .+ ...+
T Consensus 163 ------------~-~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~------~t~~~~~----~~------~~~~ 213 (306)
T PRK07792 163 ------------V-GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA------RTAMTAD----VF------GDAP 213 (306)
T ss_pred ------------C-CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC------CCchhhh----hc------cccc
Confidence 0 1223887776543 24678888888852 1111100 00 0000
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
.... ...+....++++.++.+++... ...|++|.+.+|.
T Consensus 214 ~~~~-------~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~ 254 (306)
T PRK07792 214 DVEA-------GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPM 254 (306)
T ss_pred hhhh-------hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCe
Confidence 0000 0112346888998887776432 2458999886554
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.1e-07 Score=87.48 Aligned_cols=111 Identities=16% Similarity=0.159 Sum_probs=78.8
Q ss_pred chHHHHHHHhcCCCCCCCC-cEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccCC---CCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGP-WKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h 70 (360)
||.+++++|++ +| ++|++.+|+.... .. ....+. ++.+|++|.++++++++.+. ..+|+++|
T Consensus 9 IG~aia~~l~~------~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lIn 81 (308)
T PLN00015 9 LGLATAKALAE------TGKWHVVMACRDFLKAERAAKSAGMPKDSYT-VMHLDLASLDSVRQFVDNFRRSGRPLDVLVC 81 (308)
T ss_pred HHHHHHHHHHH------CCCCEEEEEeCCHHHHHHHHHHhcCCCCeEE-EEEecCCCHHHHHHHHHHHHhcCCCCCEEEE
Confidence 79999999999 89 9999998864321 00 123577 88999999999877765431 13899999
Q ss_pred eeeecC---C----C---hhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccc
Q 037566 71 VMFQRL---K----S---EEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHY 119 (360)
Q Consensus 71 ~A~~~~---~----~---~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vY 119 (360)
.|+... . + .+..+++|+.|+.++++++...++.... ..|||++||...+
T Consensus 82 nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 82 NAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred CCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 998521 1 1 2357899999999888887664431211 3589999997654
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=9.5e-08 Score=85.47 Aligned_cols=179 Identities=15% Similarity=0.112 Sum_probs=115.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC---
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL--- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~--- 76 (360)
||++++++|++ +|++|++++|+.... .....+++ ++.+|++|++++.++++.+...+|.++|+|+...
T Consensus 12 iG~~ia~~l~~------~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~~~~ 84 (223)
T PRK05884 12 LGRTIAEGFRN------DGHKVTLVGARRDDLEVAAKELDVD-AIVCDNTDPASLEEARGLFPHHLDTIVNVPAPSWDAG 84 (223)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHhccCc-EEecCCCCHHHHHHHHHHHhhcCcEEEECCCccccCC
Confidence 79999999998 899999999875321 00122467 8999999999998887653212789999986310
Q ss_pred -----------CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 77 -----------KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 77 -----------~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
.+....+++|+.++.++++++...++. + .++|++||.. . +
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~-g~Iv~isS~~--~-~----------------------- 135 (223)
T PRK05884 85 DPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS--G-GSIISVVPEN--P-P----------------------- 135 (223)
T ss_pred CCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--C-CeEEEEecCC--C-C-----------------------
Confidence 122356799999999999999875431 2 4789887642 0 0
Q ss_pred CCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 146 LPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
....|+.+|..-. ...++.+..+.|+.+..+. +... ...|
T Consensus 136 ---~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~-------------~~~~---~~~p----------- 185 (223)
T PRK05884 136 ---AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG-------------YDGL---SRTP----------- 185 (223)
T ss_pred ---CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh-------------hhhc---cCCC-----------
Confidence 0123666654322 3468999999998774321 0000 0111
Q ss_pred ccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 216 HFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
.-..+|+++++.+++..+ ...|+++.+.+|.
T Consensus 186 ----~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~ 218 (223)
T PRK05884 186 ----PPVAAEIARLALFLTTPAARHITGQTLHVSHGA 218 (223)
T ss_pred ----CCCHHHHHHHHHHHcCchhhccCCcEEEeCCCe
Confidence 014678888888776432 2247877775554
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.1e-07 Score=88.03 Aligned_cols=144 Identities=13% Similarity=0.061 Sum_probs=95.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC----CCCCceeeEeeccCC--hHH---HHHHHccCCCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF----PSSHVDHYITFDALD--STD---TTQKLSSISQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~----~~~~v~~~v~gDl~d--~~~---l~~~l~~~~~~v~~ 67 (360)
||.+++++|++ +|++|++++|++... .. ...++. .+.+|+++ .+. +.+.+.+.+ +|+
T Consensus 65 IG~alA~~La~------~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~~l~~~~~~~d--idi 135 (320)
T PLN02780 65 IGKGFAFQLAR------KGLNLVLVARNPDKLKDVSDSIQSKYSKTQIK-TVVVDFSGDIDEGVKRIKETIEGLD--VGV 135 (320)
T ss_pred HHHHHHHHHHH------CCCCEEEEECCHHHHHHHHHHHHHHCCCcEEE-EEEEECCCCcHHHHHHHHHHhcCCC--ccE
Confidence 79999999999 899999999975431 00 013466 78899985 233 334444554 789
Q ss_pred EEEeeeecCC--------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 68 LFWVMFQRLK--------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 68 V~h~A~~~~~--------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
++|.|+.... + .+..+++|+.|+.++++++...|+.. +..+||++||...+..+ .
T Consensus 136 lVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~~-------------~ 201 (320)
T PLN02780 136 LINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIGSGAAIVIP-------------S 201 (320)
T ss_pred EEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEechhhccCC-------------C
Confidence 9999985311 2 23478999999999999986543211 34689999987543210 0
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyG 178 (360)
.| ....|+.+|...+ ...|+.+..+.|+.|-.
T Consensus 202 ---------~p-~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T 243 (320)
T PLN02780 202 ---------DP-LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVAT 243 (320)
T ss_pred ---------Cc-cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceec
Confidence 01 1334887776543 35689999999988743
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.3e-07 Score=83.62 Aligned_cols=144 Identities=11% Similarity=-0.001 Sum_probs=98.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC---CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF---PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~---~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
||.+++++|++ .|++|++++|++... .. ...++. ++.+|++|++++.++++.... +|++||+|+
T Consensus 19 iG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~g~-id~lv~~ag 90 (259)
T PRK06125 19 IGAAAAEAFAA------EGCHLHLVARDADALEALAADLRAAHGVDVA-VHALDLSSPEAREQLAAEAGD-IDILVNNAG 90 (259)
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHhhcCCceE-EEEecCCCHHHHHHHHHHhCC-CCEEEECCC
Confidence 79999999999 899999999875321 00 124578 899999999999888876543 899999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.+..++.+++...++.. +-.++|++||.... .+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss~~~~-----------------~~------ 146 (259)
T PRK06125 91 AIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIGAAGE-----------------NP------ 146 (259)
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecCcccc-----------------CC------
Confidence 5321 224568999999999999886543211 23478888775211 00
Q ss_pred CCCCCCCcHHHHHHHH---------h-cCCCCcEEEEcCCCeeec
Q 037566 145 RLPFPNFYYAVEDIAA---------S-YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~---------e-~~~~~~~~ilRp~~vyGp 179 (360)
. + ....|..+|... | ...++.+..+.|+.+-.+
T Consensus 147 ~-~-~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 147 D-A-DYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD 189 (259)
T ss_pred C-C-CchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence 0 0 122355555432 2 346899999999777654
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.8e-07 Score=84.21 Aligned_cols=145 Identities=10% Similarity=-0.004 Sum_probs=92.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC-CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF-PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~-~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||++++++|++ +|++|++++|++... .. ...++. ++.+|++|++++.++++.+ . ++|+|+|+
T Consensus 12 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~Dv~d~~~~~~~~~~~~~~~g-~id~li~n 83 (259)
T PRK08340 12 IGFNVARELLK------KGARVVISSRNEENLEKALKELKEYGEVY-AVKADLSDKDDLKNLVKEAWELLG-GIDALVWN 83 (259)
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHhcCCce-EEEcCCCCHHHHHHHHHHHHHhcC-CCCEEEEC
Confidence 79999999999 899999999875321 00 113577 8999999999888777532 3 28999999
Q ss_pred eeecC--C------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 72 MFQRL--K------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 72 A~~~~--~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+... . + ....+.+|+.++..+..++...+....+-.+||++||...+.. .
T Consensus 84 aG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~-----------------~- 145 (259)
T PRK08340 84 AGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP-----------------M- 145 (259)
T ss_pred CCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC-----------------C-
Confidence 98521 0 1 1234577887766555544321100113458999988754310 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
| +...|+.+|...+ ...|+.+..+.|+.+-.|
T Consensus 146 ------~-~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 146 ------P-PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTP 187 (259)
T ss_pred ------C-CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCc
Confidence 0 1233665554322 346899999999877554
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.61 E-value=2e-07 Score=93.96 Aligned_cols=145 Identities=8% Similarity=-0.041 Sum_probs=100.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||.+++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ . ++|+++|+|+
T Consensus 17 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~iD~li~nag 88 (520)
T PRK06484 17 IGRAACQRFAR------AGDQVVVADRNVERARERADSLGPDHH-ALAMDVSDEAQIREGFEQLHREFG-RIDVLVNNAG 88 (520)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhCCcee-EEEeccCCHHHHHHHHHHHHHHhC-CCCEEEECCC
Confidence 79999999999 9999999998754310 0123567 8999999999988877653 2 3899999998
Q ss_pred ecC--------C---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 74 QRL--------K---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 74 ~~~--------~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
... . +.+.++++|+.++.++++++...++....-.+||++||..... +..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~-----------------~~~~- 150 (520)
T PRK06484 89 VTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV-----------------ALPK- 150 (520)
T ss_pred cCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC-----------------CCCC-
Confidence 521 1 2345789999999999999886542111113899998864321 1111
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
...|+.+|...+ ...++.++.+.|+.|-.+
T Consensus 151 -------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 151 -------RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQ 190 (520)
T ss_pred -------CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCch
Confidence 223766665433 345899999999988655
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.5e-06 Score=80.10 Aligned_cols=196 Identities=7% Similarity=0.002 Sum_probs=118.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||..++++|++ +|++|++.+|+.... .. ...... ++.+|++|++++.++++.+ . .+|+++|.
T Consensus 21 IG~aiA~~la~------~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lVnn 92 (271)
T PRK06505 21 IAWGIAKQLAA------QGAELAFTYQGEALGKRVKPLAESLGSDF-VLPCDVEDIASVDAVFEALEKKWG-KLDFVVHA 92 (271)
T ss_pred HHHHHHHHHHh------CCCEEEEecCchHHHHHHHHHHHhcCCce-EEeCCCCCHHHHHHHHHHHHHHhC-CCCEEEEC
Confidence 79999999999 999999888763210 00 011234 7899999999887776543 3 38999999
Q ss_pred eeecC------C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 72 MFQRL------K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 72 A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+... . +.+..+++|+.++.++++++...++ . + .++|++||.+... +
T Consensus 93 AG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~-~-~-G~Iv~isS~~~~~-----------------~ 152 (271)
T PRK06505 93 IGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP-D-G-GSMLTLTYGGSTR-----------------V 152 (271)
T ss_pred CccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc-c-C-ceEEEEcCCCccc-----------------c
Confidence 98532 1 1234678999999999998877653 1 2 4789888753210 0
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
. | ....|+.+|.... ...|+.+..+.|+.|-.+-....... . ....... ...|+
T Consensus 153 ~-------~-~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~-~--~~~~~~~--~~~p~--- 216 (271)
T PRK06505 153 M-------P-NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDA-R--AIFSYQQ--RNSPL--- 216 (271)
T ss_pred C-------C-ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcch-H--HHHHHHh--hcCCc---
Confidence 0 1 0223666664322 35689999999998865421111010 0 0111111 11121
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
+ -+...+|+|+++++++..+. ..|+...+.+|.
T Consensus 217 ~---------r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 217 R---------RTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred c---------ccCCHHHHHHHHHHHhCccccccCceEEeecCCc
Confidence 1 12357889999888775322 247777775553
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.9e-06 Score=78.80 Aligned_cols=195 Identities=7% Similarity=0.010 Sum_probs=118.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|++.+|+.... .. ....+. ++.+|++|.+++.++++.+ . .+|+++|+
T Consensus 24 IG~a~a~~la~------~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~ld~lv~n 95 (258)
T PRK07533 24 IAWGCARAFRA------LGAELAVTYLNDKARPYVEPLAEELDAPI-FLPLDVREPGQLEAVFARIAEEWG-RLDFLLHS 95 (258)
T ss_pred HHHHHHHHHHH------cCCEEEEEeCChhhHHHHHHHHHhhccce-EEecCcCCHHHHHHHHHHHHHHcC-CCCEEEEc
Confidence 79999999999 899999988864211 00 112345 7899999999887776543 2 38999999
Q ss_pred eeecCC-------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 72 MFQRLK-------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 72 A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+.... +.+..+++|+.|+.++++++...++. + .++|++||.... .+
T Consensus 96 Ag~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~-g~Ii~iss~~~~-----------------~~ 155 (258)
T PRK07533 96 IAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--G-GSLLTMSYYGAE-----------------KV 155 (258)
T ss_pred CccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--C-CEEEEEeccccc-----------------cC
Confidence 985310 23457899999999999998776431 1 478888774211 01
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
. | ....|+.+|...+ ...++.+..+.|+.|-.+-......... ...... ...|+
T Consensus 156 ~-------~-~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~---~~~~~~--~~~p~--- 219 (258)
T PRK07533 156 V-------E-NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDA---LLEDAA--ERAPL--- 219 (258)
T ss_pred C-------c-cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHH---HHHHHH--hcCCc---
Confidence 0 1 0223776665332 3468999999998885542111000000 001110 11121
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
..+...+|+|+++++++..+ ...|+.+.+.+|
T Consensus 220 ---------~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 220 ---------RRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred ---------CCCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence 12346788999988887542 234777766444
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1e-06 Score=80.01 Aligned_cols=89 Identities=15% Similarity=0.108 Sum_probs=68.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC---
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL--- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~--- 76 (360)
||++++++|++ +|++|++++|++.... ....... ++.+|++|.+++.+.+.+ +|+++|+|+...
T Consensus 26 IG~ala~~l~~------~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~----iDilVnnAG~~~~~~ 94 (245)
T PRK12367 26 LGKALTKAFRA------KGAKVIGLTHSKINNSESNDESPNE-WIKWECGKEESLDKQLAS----LDVLILNHGINPGGR 94 (245)
T ss_pred HHHHHHHHHHH------CCCEEEEEECCchhhhhhhccCCCe-EEEeeCCCHHHHHHhcCC----CCEEEECCccCCcCC
Confidence 79999999999 8999999998752211 0111235 789999999998887765 689999998531
Q ss_pred ---CChhHhhhhhHHHHHHHHHHHHhhc
Q 037566 77 ---KSEEINISNNSTMFKNVMSVVVDSN 101 (360)
Q Consensus 77 ---~~~~~~~~vNv~gt~nll~a~~~~~ 101 (360)
.+....+++|+.|+.++++++...+
T Consensus 95 ~~~~~~~~~~~vN~~g~~~l~~~~~~~m 122 (245)
T PRK12367 95 QDPENINKALEINALSSWRLLELFEDIA 122 (245)
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 1345678999999999999987654
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.2e-06 Score=77.19 Aligned_cols=195 Identities=9% Similarity=0.018 Sum_probs=117.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCC-CC-----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPP-PS-----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~-~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|++++|+.. .. ......+. ++.+|++|+++++++++.+ . .+|+++|.
T Consensus 21 IG~a~a~~la~------~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i~~~~~~~~~~~g-~iD~li~n 92 (256)
T PRK07889 21 IAFHVARVAQE------QGAEVVLTGFGRALRLTERIAKRLPEPAP-VLELDVTNEEHLASLADRVREHVD-GLDGVVHS 92 (256)
T ss_pred HHHHHHHHHHH------CCCEEEEecCccchhHHHHHHHhcCCCCc-EEeCCCCCHHHHHHHHHHHHHHcC-CCcEEEEc
Confidence 79999999998 8999999987542 11 00123577 8999999999887776532 2 38999999
Q ss_pred eeecC------C----Ch---hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 72 MFQRL------K----SE---EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 72 A~~~~------~----~~---~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+... . +. ...+++|+.|+.++.+++...++. + .++|++|+....
T Consensus 93 AG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~-g~Iv~is~~~~~------------------- 150 (256)
T PRK07889 93 IGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--G-GSIVGLDFDATV------------------- 150 (256)
T ss_pred cccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--C-ceEEEEeecccc-------------------
Confidence 98531 1 22 235799999999999998765431 1 468877643110
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
.. | ....|+.+|.... ...|+.+..+.|+.|--+-......... ....+. ...|+
T Consensus 151 ---~~---~-~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~---~~~~~~--~~~p~--- 215 (256)
T PRK07889 151 ---AW---P-AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFEL---LEEGWD--ERAPL--- 215 (256)
T ss_pred ---cC---C-ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHH---HHHHHH--hcCcc---
Confidence 00 1 0223676664332 3468999999999886542111100000 000110 11121
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
+ .-+...+++|+++++++..+. ..|+++++.+|
T Consensus 216 ~--------~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 216 G--------WDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred c--------cccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence 1 013457889999888875432 24777776544
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.8e-06 Score=77.40 Aligned_cols=147 Identities=14% Similarity=0.034 Sum_probs=95.2
Q ss_pred CchHHHHHHHhcCCCCCCCC--cEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC-
Q 037566 1 MAGLSLAEALKNNPTIPGGP--WKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~- 77 (360)
.||++++++|++ +| +.|....|..... ....++. ++++|++|.+++++..+.... +|+|||+|+....
T Consensus 11 gIG~~ia~~l~~------~~~~~~v~~~~~~~~~~-~~~~~~~-~~~~Dls~~~~~~~~~~~~~~-id~li~~aG~~~~~ 81 (235)
T PRK09009 11 GIGKAMVKQLLE------RYPDATVHATYRHHKPD-FQHDNVQ-WHALDVTDEAEIKQLSEQFTQ-LDWLINCVGMLHTQ 81 (235)
T ss_pred hHHHHHHHHHHH------hCCCCEEEEEccCCccc-cccCceE-EEEecCCCHHHHHHHHHhcCC-CCEEEECCcccccc
Confidence 389999999998 64 5666666654332 1235678 899999999988776665543 8999999985311
Q ss_pred -----------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 78 -----------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 78 -----------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+ ....+.+|+.++.++.+++...++.. +..+++++||.. |.. . .+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~~~i~~iss~~--~~~---------------~-~~~~ 142 (235)
T PRK09009 82 DKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-ESAKFAVISAKV--GSI---------------S-DNRL 142 (235)
T ss_pred ccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-CCceEEEEeecc--ccc---------------c-cCCC
Confidence 1 12467899999999999887654322 245788887631 210 0 0111
Q ss_pred CCCCCCCCcHHHHHHHHh----------cC--CCCcEEEEcCCCeeec
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YS--PAVTYSVHRSSIIIGA 179 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~--~~~~~~ilRp~~vyGp 179 (360)
+ +...|+.+|...+ .. .++.+..+.|+.|-.+
T Consensus 143 ~----~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~ 186 (235)
T PRK09009 143 G----GWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTA 186 (235)
T ss_pred C----CcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecC
Confidence 1 1234666554433 11 4788899999888654
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.5e-06 Score=78.09 Aligned_cols=197 Identities=8% Similarity=-0.011 Sum_probs=116.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C-CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W-FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~-~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|+...|..... . ....... .+.+|++|++++.++++.+ . ++|+++|+
T Consensus 20 IG~a~a~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~lVnn 91 (261)
T PRK08690 20 IAYGIAKACRE------QGAELAFTYVVDKLEERVRKMAAELDSEL-VFRCDVASDDEINQVFADLGKHWD-GLDGLVHS 91 (261)
T ss_pred HHHHHHHHHHH------CCCEEEEEcCcHHHHHHHHHHHhccCCce-EEECCCCCHHHHHHHHHHHHHHhC-CCcEEEEC
Confidence 79999999999 899998876642110 0 0112345 7899999999988776532 2 38999999
Q ss_pred eeecCC-----------Ch---hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 72 MFQRLK-----------SE---EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 72 A~~~~~-----------~~---~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+.... +. +..+++|+.++..+.+++...++.. + .+||++||.+.+.
T Consensus 92 AG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~-g~Iv~iss~~~~~----------------- 152 (261)
T PRK08690 92 IGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-N-SAIVALSYLGAVR----------------- 152 (261)
T ss_pred CccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-C-cEEEEEccccccc-----------------
Confidence 985321 11 2346889999988888876544312 2 4788888753211
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+. | ....|+.+|...+ ...|+.+..+.|+.|--+-........ .....+. ...|+
T Consensus 153 ~~-------~-~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~---~~~~~~~--~~~p~-- 217 (261)
T PRK08690 153 AI-------P-NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFG---KLLGHVA--AHNPL-- 217 (261)
T ss_pred CC-------C-CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchH---HHHHHHh--hcCCC--
Confidence 00 1 1223666654322 356899999999888543211110000 0000110 11121
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..+...+|+|+++++++..+ ...|+.+-+.+|.
T Consensus 218 ----------~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 218 ----------RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred ----------CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence 12456888999999887643 2347777665543
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.6e-07 Score=81.64 Aligned_cols=142 Identities=16% Similarity=0.094 Sum_probs=98.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC---CCCCceeeEeeccCChHHHHHHHccCC---CCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF---PSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~---~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~h 70 (360)
||..++++|.+ +|+.|+.+.|+.... .+ ..-.++ ++.+||+|++++.+..+... ..||.+++
T Consensus 18 IG~~~A~~lA~------~g~~liLvaR~~~kL~~la~~l~~~~~v~v~-vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVN 90 (265)
T COG0300 18 IGAELAKQLAR------RGYNLILVARREDKLEALAKELEDKTGVEVE-VIPADLSDPEALERLEDELKERGGPIDVLVN 90 (265)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCcHHHHHHHHHHHHHhhCceEE-EEECcCCChhHHHHHHHHHHhcCCcccEEEE
Confidence 79999999999 999999999986532 01 123567 89999999988776554210 02899999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
.|+.... +.++++++|+.++..|-.+....|... +-.++|.++|.+.|-
T Consensus 91 NAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-~~G~IiNI~S~ag~~--------------------- 148 (265)
T COG0300 91 NAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-GAGHIINIGSAAGLI--------------------- 148 (265)
T ss_pred CCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechhhcC---------------------
Confidence 9985321 345689999999888887776432211 335899998875442
Q ss_pred CCCCCCCC-CCcHHHHHHH--------H-h-cCCCCcEEEEcCCCee
Q 037566 142 DSLRLPFP-NFYYAVEDIA--------A-S-YSPAVTYSVHRSSIII 177 (360)
Q Consensus 142 ~~p~~p~p-~~~Y~~ek~l--------~-e-~~~~~~~~ilRp~~vy 177 (360)
|.| ..-|+.+|.. . | +..|+.++.+.|+.+.
T Consensus 149 -----p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~ 190 (265)
T COG0300 149 -----PTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTR 190 (265)
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccc
Confidence 112 3447777642 2 2 5678999999996654
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.1e-06 Score=80.42 Aligned_cols=195 Identities=9% Similarity=0.031 Sum_probs=118.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||..++++|++ +|++|+...|+.... .. ....+. ++.+|++|++++.++++.+ . .+|++
T Consensus 20 IG~aia~~la~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~g-~iD~l 91 (258)
T PRK07370 20 IAWGIAQQLHA------AGAELGITYLPDEKGRFEKKVRELTEPLNPSL-FLPCDVQDDAQIEETFETIKQKWG-KLDIL 91 (258)
T ss_pred hHHHHHHHHHH------CCCEEEEEecCcccchHHHHHHHHHhccCcce-EeecCcCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 79999999999 899998776543210 00 112466 8899999999988776543 2 38999
Q ss_pred EEeeeecC------C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCC
Q 037566 69 FWVMFQRL------K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 69 ~h~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
+|+|+... . +.+..+++|+.|+..+.+++...++. + .+||++||....
T Consensus 92 v~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~-g~Iv~isS~~~~---------------- 152 (258)
T PRK07370 92 VHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--G-GSIVTLTYLGGV---------------- 152 (258)
T ss_pred EEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--C-CeEEEEeccccc----------------
Confidence 99998531 1 12457899999999999998765431 2 589999875311
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCe
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (360)
.+. | ....|+.+|...+ ...|+.+..+.|+.|--+-.....+... ....+. ...|+
T Consensus 153 -~~~-------~-~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~---~~~~~~--~~~p~ 218 (258)
T PRK07370 153 -RAI-------P-NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILD---MIHHVE--EKAPL 218 (258)
T ss_pred -cCC-------c-ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchh---hhhhhh--hcCCc
Confidence 010 1 1234777665433 3568999999999885542111000000 000010 11111
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
.-+...+|++.++.+++..+. ..|+++.+.+|
T Consensus 219 ------------~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg 252 (258)
T PRK07370 219 ------------RRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG 252 (258)
T ss_pred ------------CcCCCHHHHHHHHHHHhChhhccccCcEEEECCc
Confidence 124457889998888775322 34787777544
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.3e-06 Score=78.21 Aligned_cols=195 Identities=9% Similarity=0.003 Sum_probs=118.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||.+++++|++ +|++|+..+|+.... .....++. ++.+|++|++++.++++.+ . ++|.++
T Consensus 21 IG~aia~~la~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~ld~lv 92 (257)
T PRK08594 21 IAWGIARSLHN------AGAKLVFTYAGERLEKEVRELADTLEGQESL-LLPCDVTSDEEITACFETIKEEVG-VIHGVA 92 (257)
T ss_pred HHHHHHHHHHH------CCCEEEEecCcccchHHHHHHHHHcCCCceE-EEecCCCCHHHHHHHHHHHHHhCC-CccEEE
Confidence 79999999999 899999887753211 01124577 8999999999887776532 3 389999
Q ss_pred EeeeecC-----C-----Ch---hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 70 WVMFQRL-----K-----SE---EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 70 h~A~~~~-----~-----~~---~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
|+|+... . +. ...+++|+.++.++.+++...++. -.+||++||....
T Consensus 93 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~~----------------- 152 (257)
T PRK08594 93 HCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLGGE----------------- 152 (257)
T ss_pred ECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccCCc-----------------
Confidence 9998431 1 12 235689999999999888765421 1479999875321
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
.+. | ....|+.+|...+ ...|+.+..+.|+.|-.+.......... ....+. ...|+
T Consensus 153 ~~~-------~-~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~---~~~~~~--~~~p~- 218 (257)
T PRK08594 153 RVV-------Q-NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNS---ILKEIE--ERAPL- 218 (257)
T ss_pred cCC-------C-CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccH---HHHHHh--hcCCc-
Confidence 110 1 1224777665433 3468999999998886542110000000 000000 01111
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
.-+...+|+|+++++++.... ..|+.+.+.+|
T Consensus 219 -----------~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 219 -----------RRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred -----------cccCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence 123457889999888765322 24777767544
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.6e-07 Score=82.72 Aligned_cols=196 Identities=10% Similarity=0.027 Sum_probs=118.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCC---------CCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRP---------PPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI---- 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~---------~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~---- 61 (360)
||++++++|++ +|++|++++|+. ... .. ...++. ++.+|++|.+++.++++.+
T Consensus 18 IG~aia~~la~------~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~ 90 (286)
T PRK07791 18 IGRAHALAFAA------EGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAV-ANGDDIADWDGAANLVDAAVETF 90 (286)
T ss_pred HHHHHHHHHHH------CCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceE-EEeCCCCCHHHHHHHHHHHHHhc
Confidence 79999999999 899999988754 110 00 123567 8899999998887766542
Q ss_pred CCCccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCC-----CCccEEEEeccCccccccccCCc
Q 037566 62 SQEVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGR-----SRLRHVTLLMGTKHYMGPVFDPS 127 (360)
Q Consensus 62 ~~~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~-----~~v~r~v~~SS~~vYg~~~~~~~ 127 (360)
. .+|+++|+|+.... +.+..+++|+.|+.++++++...++.. ..-.+||++||.+.+..
T Consensus 91 g-~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~------ 163 (286)
T PRK07791 91 G-GLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG------ 163 (286)
T ss_pred C-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC------
Confidence 3 38999999985321 234578999999999998886532100 01247999988543210
Q ss_pred ccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHH
Q 037566 128 LVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATI 197 (360)
Q Consensus 128 ~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~ 197 (360)
. + ....|+.+|...+ ...|+.+..+.|+ +. ...... .+...
T Consensus 164 -----------~-------~-~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~----T~~~~~-----~~~~~ 214 (286)
T PRK07791 164 -----------S-------V-GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-AR----TRMTET-----VFAEM 214 (286)
T ss_pred -----------C-------C-CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CC----CCcchh-----hHHHH
Confidence 0 0 0233776665432 3468999999996 31 111110 00011
Q ss_pred HhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 198 CRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 198 ~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
. ..+ + .+ .......+|+|+++++++... ...|+.+.+.+|...
T Consensus 215 ~---~~~-~-~~-------~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~ 259 (286)
T PRK07791 215 M---AKP-E-EG-------EFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKIS 259 (286)
T ss_pred H---hcC-c-cc-------ccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence 0 111 0 01 012456888999999887532 235787777555543
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.1e-06 Score=80.18 Aligned_cols=149 Identities=16% Similarity=0.042 Sum_probs=95.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C---CCCCCceeeEeeccCChHHHHHHHccCCC-------Cc
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W---FPSSHVDHYITFDALDSTDTTQKLSSISQ-------EV 65 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~---~~~~~v~~~v~gDl~d~~~l~~~l~~~~~-------~v 65 (360)
||.+++++|++. . ..+|+.|+.++|+.... . .....+. ++.+|++|++++.++++.+.. +.
T Consensus 12 IG~~~a~~la~~-~-~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~ 88 (256)
T TIGR01500 12 FGRTIAQELAKC-L-KSPGSVLVLSARNDEALRQLKAEIGAERSGLRVV-RVSLDLGAEAGLEQLLKALRELPRPKGLQR 88 (256)
T ss_pred hHHHHHHHHHHh-h-ccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEE-EEEeccCCHHHHHHHHHHHHhccccCCCce
Confidence 799999999840 0 00589999999875321 0 0123577 899999999988777654310 12
Q ss_pred cEEEEeeeecC---C------C---hhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccccccccCCcccCCc
Q 037566 66 THLFWVMFQRL---K------S---EEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHYMGPVFDPSLVGQL 132 (360)
Q Consensus 66 ~~V~h~A~~~~---~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vYg~~~~~~~~~g~~ 132 (360)
++|||.|+... . + .+..+++|+.|+..+.+++...++...+ -.+||++||...+.
T Consensus 89 ~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~------------ 156 (256)
T TIGR01500 89 LLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ------------ 156 (256)
T ss_pred EEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC------------
Confidence 58999998421 1 1 2357899999999888887665331112 35799998864321
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeee
Q 037566 133 IGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 133 ~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyG 178 (360)
|. | ....|+.+|...+ ...++.+..+.|+.|-.
T Consensus 157 -----~~-------~-~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T 199 (256)
T TIGR01500 157 -----PF-------K-GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDT 199 (256)
T ss_pred -----CC-------C-CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccc
Confidence 00 1 1234777765433 34679999999987744
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.7e-06 Score=79.86 Aligned_cols=195 Identities=8% Similarity=-0.035 Sum_probs=118.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC--C---C-C-CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP--S---W-F-PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~--~---~-~-~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||..++++|++ +|++|++.+|+... . . . .... . .+.+|++|.+++.++++.+ . .+|+++|
T Consensus 19 IG~aiA~~la~------~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~-~~~~Dv~d~~~v~~~~~~i~~~~g-~iDilVn 89 (274)
T PRK08415 19 IAYGIAKACFE------QGAELAFTYLNEALKKRVEPIAQELGSD-Y-VYELDVSKPEHFKSLAESLKKDLG-KIDFIVH 89 (274)
T ss_pred HHHHHHHHHHH------CCCEEEEEecCHHHHHHHHHHHHhcCCc-e-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 89999988886310 0 0 0 1122 5 7899999999887776543 3 3899999
Q ss_pred eeeecC------C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 71 VMFQRL------K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 71 ~A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
.|+... . +.+..+++|+.|...+.+++...++. + .+||++||.+.. .
T Consensus 90 nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~-g~Iv~isS~~~~-----------------~ 149 (274)
T PRK08415 90 SVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--G-ASVLTLSYLGGV-----------------K 149 (274)
T ss_pred CCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--C-CcEEEEecCCCc-----------------c
Confidence 998531 1 12457899999999999998876531 2 479998875311 0
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+. | ....|+.+|.... ..+|+.+..+.|+.|..+......... ....... ...|+
T Consensus 150 ~~-------~-~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~---~~~~~~~--~~~pl-- 214 (274)
T PRK08415 150 YV-------P-HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFR---MILKWNE--INAPL-- 214 (274)
T ss_pred CC-------C-cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhh---HHhhhhh--hhCch--
Confidence 00 1 0223776665332 346899999999888654211100000 0000000 01111
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
+ -+...+|+|+++++++... ...|+.+.+.+|.
T Consensus 215 -~---------r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 215 -K---------KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGY 249 (274)
T ss_pred -h---------ccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcc
Confidence 1 1345788999988877532 2347777665553
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.7e-06 Score=74.86 Aligned_cols=195 Identities=8% Similarity=-0.009 Sum_probs=116.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CC-CC-CCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WF-PS-SHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~-~~-~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|+..+|+.... .+ .. .... ++.+|++|++++.++++.+ . .+|+++|.
T Consensus 22 IG~a~a~~la~------~G~~v~~~~r~~~~~~~~~~l~~~~g~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iDilVnn 93 (260)
T PRK06603 22 ISWAIAQLAKK------HGAELWFTYQSEVLEKRVKPLAEEIGCNF-VSELDVTNPKSISNLFDDIKEKWG-SFDFLLHG 93 (260)
T ss_pred hHHHHHHHHHH------cCCEEEEEeCchHHHHHHHHHHHhcCCce-EEEccCCCHHHHHHHHHHHHHHcC-CccEEEEc
Confidence 79999999998 899998888763110 00 11 1234 6789999999987777532 2 38999999
Q ss_pred eeecC------C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 72 MFQRL------K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 72 A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+... . +....+++|+.+...+++++...++. + .++|++||..... +
T Consensus 94 ag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~-G~Iv~isS~~~~~-----------------~ 153 (260)
T PRK06603 94 MAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--G-GSIVTLTYYGAEK-----------------V 153 (260)
T ss_pred cccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--C-ceEEEEecCcccc-----------------C
Confidence 87421 1 23346899999999999988765421 2 4799998753211 0
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
. |. ...|+.+|...+ ...|+.+..+.|+.|-.+-........ .....+. ...|+
T Consensus 154 ~-------~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~---~~~~~~~--~~~p~--- 217 (260)
T PRK06603 154 I-------PN-YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFS---TMLKSHA--ATAPL--- 217 (260)
T ss_pred C-------Cc-ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcH---HHHHHHH--hcCCc---
Confidence 0 10 123666654322 356899999999888554211000000 0011111 11121
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
+ .+...+|+|+++++++.... ..|+.+.+.+|
T Consensus 218 ~---------r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 218 K---------RNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred C---------CCCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence 1 23457889999998875322 34777777554
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.4e-05 Score=68.17 Aligned_cols=194 Identities=15% Similarity=0.119 Sum_probs=119.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCC-CCceeeEeeccCChHHHHHHHc----cCCCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPS-SHVDHYITFDALDSTDTTQKLS----SISQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~-~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h~ 71 (360)
||++++..|.. .|++|.+.+++.... .+.. .+-. -+.+|+.++.+++..++ ... .|+++++|
T Consensus 26 IGrAia~~la~------~Garv~v~dl~~~~A~ata~~L~g~~~h~-aF~~DVS~a~~v~~~l~e~~k~~g-~psvlVnc 97 (256)
T KOG1200|consen 26 IGRAIAQLLAK------KGARVAVADLDSAAAEATAGDLGGYGDHS-AFSCDVSKAHDVQNTLEEMEKSLG-TPSVLVNC 97 (256)
T ss_pred HHHHHHHHHHh------cCcEEEEeecchhhHHHHHhhcCCCCccc-eeeeccCcHHHHHHHHHHHHHhcC-CCcEEEEc
Confidence 79999999998 999999998875431 1111 1223 58999999987665443 334 38999999
Q ss_pred eeecCC---------ChhHhhhhhHHHHHHHHHHHHhh--ccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 72 MFQRLK---------SEEINISNNSTMFKNVMSVVVDS--NKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 72 A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|++..+ +++..+.+|..|+..+-+|+.+. ++.+ +.-++|-+||+- |- +|.. -
T Consensus 98 AGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~-~~~sIiNvsSIV--Gk-------iGN~-------G 160 (256)
T KOG1200|consen 98 AGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ-QGLSIINVSSIV--GK-------IGNF-------G 160 (256)
T ss_pred CccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC-CCceEEeehhhh--cc-------cccc-------c
Confidence 997543 56778999999999998888765 2222 233799998862 21 1210 0
Q ss_pred CCCCCCCCCCCcHHH--------HHHHH-h-cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAV--------EDIAA-S-YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~--------ek~l~-e-~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
...|+. +|.++ | ...++++-++-|+.|--|- ....+-.+...++ ...|+--
T Consensus 161 ---------QtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpM-----T~~mp~~v~~ki~--~~iPmgr--- 221 (256)
T KOG1200|consen 161 ---------QTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPM-----TEAMPPKVLDKIL--GMIPMGR--- 221 (256)
T ss_pred ---------chhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChh-----hhhcCHHHHHHHH--ccCCccc---
Confidence 111333 44443 3 5678999999999886552 2211222222222 1233222
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCCC---CCCceeccCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDRA---KNQAFNCTNG 249 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~~---~g~~yni~~g 249 (360)
+-+++++|....+++. +.. .|..+.|.+|
T Consensus 222 ---------~G~~EevA~~V~fLAS-~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 222 ---------LGEAEEVANLVLFLAS-DASSYITGTTLEVTGG 253 (256)
T ss_pred ---------cCCHHHHHHHHHHHhc-cccccccceeEEEecc
Confidence 2346677777777663 322 3677777655
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.5e-06 Score=78.74 Aligned_cols=196 Identities=7% Similarity=-0.008 Sum_probs=118.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC--C---CC-CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP--S---WF-PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~--~---~~-~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|+...|+... . .. ....+. .+.+|++|++++.++++.+ . .+|+++|.
T Consensus 24 IG~aia~~la~------~G~~V~l~~r~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~lv~n 95 (272)
T PRK08159 24 IAWGIAKACRA------AGAELAFTYQGDALKKRVEPLAAELGAFV-AGHCDVTDEASIDAVFETLEKKWG-KLDFVVHA 95 (272)
T ss_pred HHHHHHHHHHH------CCCEEEEEcCchHHHHHHHHHHHhcCCce-EEecCCCCHHHHHHHHHHHHHhcC-CCcEEEEC
Confidence 79999999999 99999888775211 0 00 112355 7899999999888776543 2 38999999
Q ss_pred eeecC------C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 72 MFQRL------K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 72 A~~~~------~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+... . +.+..+++|+.++.++++++...++. + .++|++||.+.+. +
T Consensus 96 AG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~-g~Iv~iss~~~~~-----------------~ 155 (272)
T PRK08159 96 IGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--G-GSILTLTYYGAEK-----------------V 155 (272)
T ss_pred CcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--C-ceEEEEecccccc-----------------C
Confidence 98532 1 23457799999999999998775431 2 5788888743210 0
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
. | ....|+.+|.... ...++.+..+.|+.|.-+-........ ...... ....|+
T Consensus 156 ~-------p-~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~---~~~~~~--~~~~p~--- 219 (272)
T PRK08159 156 M-------P-HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFR---YILKWN--EYNAPL--- 219 (272)
T ss_pred C-------C-cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcch---HHHHHH--HhCCcc---
Confidence 0 1 0223666664332 346899999999888543110000000 000000 011121
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
+ -+...+|+|+++++++... ...|+.+.+.+|.
T Consensus 220 ~---------r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~ 254 (272)
T PRK08159 220 R---------RTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGY 254 (272)
T ss_pred c---------ccCCHHHHHHHHHHHhCccccCccceEEEECCCc
Confidence 1 1356788999988887533 2347877776553
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.6e-06 Score=81.71 Aligned_cols=89 Identities=12% Similarity=0.025 Sum_probs=69.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~- 76 (360)
||++++++|++ +|++|++++|++.... .....+. .+.+|++|++++.+.+.+ +|+++|+|+...
T Consensus 190 IG~aLA~~La~------~G~~Vi~l~r~~~~l~~~~~~~~~~v~-~v~~Dvsd~~~v~~~l~~----IDiLInnAGi~~~ 258 (406)
T PRK07424 190 LGQALLKELHQ------QGAKVVALTSNSDKITLEINGEDLPVK-TLHWQVGQEAALAELLEK----VDILIINHGINVH 258 (406)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHhhcCCCeE-EEEeeCCCHHHHHHHhCC----CCEEEECCCcCCC
Confidence 89999999998 8999999998753210 0122467 889999999999888876 689999998532
Q ss_pred --C---ChhHhhhhhHHHHHHHHHHHHhhc
Q 037566 77 --K---SEEINISNNSTMFKNVMSVVVDSN 101 (360)
Q Consensus 77 --~---~~~~~~~vNv~gt~nll~a~~~~~ 101 (360)
. +.+..+++|+.|+.++++++...+
T Consensus 259 ~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m 288 (406)
T PRK07424 259 GERTPEAINKSYEVNTFSAWRLMELFFTTV 288 (406)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 235678999999999999987654
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.3e-07 Score=80.55 Aligned_cols=194 Identities=12% Similarity=0.081 Sum_probs=121.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHcc----C-CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSS----I-SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~----~-~~~v~~V~h 70 (360)
||.+++++|++ +|++|++++|+.... .....+.+ .+.+|++|++++.++++. . . .+|+++|
T Consensus 8 iG~aia~~l~~------~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g-~iD~lV~ 79 (241)
T PF13561_consen 8 IGRAIARALAE------EGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGG-RIDILVN 79 (241)
T ss_dssp HHHHHHHHHHH------TTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCS-SESEEEE
T ss_pred hHHHHHHHHHH------CCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCC-CeEEEEe
Confidence 79999999999 999999999986531 01123467 799999999988776543 2 3 2899999
Q ss_pred eeeecCC-------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 71 VMFQRLK-------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 71 ~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
+|+.... +....+++|+.++..+++++.+.++ .-.++|++||.....
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~gsii~iss~~~~~----------------- 139 (241)
T PF13561_consen 80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMK---KGGSIINISSIAAQR----------------- 139 (241)
T ss_dssp EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHH---HEEEEEEEEEGGGTS-----------------
T ss_pred cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---hCCCcccccchhhcc-----------------
Confidence 9974321 1234679999999999999876542 125789988764221
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cC-CCCcEEEEcCCCeeecCCCCcchhHH-HHHHHHHHHhhcCCCe
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YS-PAVTYSVHRSSIIIGASSRSLNNSLL-TLAVYATICRHQGLPF 205 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~-~~~~~~ilRp~~vyGp~~~~~~~~~~-~~~~~~~~~~~~~~~~ 205 (360)
+. | ....|+..|...+ .. .|+.+-.+.|+.|-.+.. .... .-....... ...|+
T Consensus 140 ~~-------~-~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~----~~~~~~~~~~~~~~--~~~pl 205 (241)
T PF13561_consen 140 PM-------P-GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMT----ERIPGNEEFLEELK--KRIPL 205 (241)
T ss_dssp BS-------T-TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHH----HHHHTHHHHHHHHH--HHSTT
T ss_pred cC-------c-cchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccch----hccccccchhhhhh--hhhcc
Confidence 10 1 1235776554332 45 699999999987764321 1000 000111111 11232
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
| -+...+|+|+++++++... ...|++..|.+|
T Consensus 206 ---~---------r~~~~~evA~~v~fL~s~~a~~itG~~i~vDGG 239 (241)
T PF13561_consen 206 ---G---------RLGTPEEVANAVLFLASDAASYITGQVIPVDGG 239 (241)
T ss_dssp ---S---------SHBEHHHHHHHHHHHHSGGGTTGTSEEEEESTT
T ss_pred ---C---------CCcCHHHHHHHHHHHhCccccCccCCeEEECCC
Confidence 1 1235888999999887532 234888777544
|
... |
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=4.8e-06 Score=76.21 Aligned_cols=195 Identities=7% Similarity=-0.037 Sum_probs=117.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC-C----CC-CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP-S----WF-PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~-~----~~-~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|+..+|.... . .. ...... .+.+|++|++++.++++.+ . .+|+++|.
T Consensus 20 IG~a~a~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lvnn 91 (260)
T PRK06997 20 IAYGIAKACKR------EGAELAFTYVGDRFKDRITEFAAEFGSDL-VFPCDVASDEQIDALFASLGQHWD-GLDGLVHS 91 (260)
T ss_pred HHHHHHHHHHH------CCCeEEEEccchHHHHHHHHHHHhcCCcc-eeeccCCCHHHHHHHHHHHHHHhC-CCcEEEEc
Confidence 78999999999 89999887654211 0 00 012335 7899999999988877543 3 38999999
Q ss_pred eeecCC--------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 72 MFQRLK--------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 72 A~~~~~--------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+.... +.+..+++|+.|+..+.+++...++ +-.++|++||.... .
T Consensus 92 AG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~---~~g~Ii~iss~~~~-----------------~ 151 (260)
T PRK06997 92 IGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS---DDASLLTLSYLGAE-----------------R 151 (260)
T ss_pred cccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC---CCceEEEEeccccc-----------------c
Confidence 985310 1224678999999999999887643 12579998875321 0
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+. | ....|+.+|..-. ..+++.+..+.|+.|--+-........ .....+. ...|+
T Consensus 152 ~~-------~-~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~---~~~~~~~--~~~p~-- 216 (260)
T PRK06997 152 VV-------P-NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFG---KILDFVE--SNAPL-- 216 (260)
T ss_pred CC-------C-CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchh---hHHHHHH--hcCcc--
Confidence 10 1 0223776664332 346899999999887543111100000 0011111 11121
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
| -+...+|+|+++.+++..+ ...|+++.+.+|
T Consensus 217 -~---------r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 250 (260)
T PRK06997 217 -R---------RNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG 250 (260)
T ss_pred -c---------ccCCHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence 1 2356788999988887532 234787777554
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.7e-06 Score=75.90 Aligned_cols=195 Identities=7% Similarity=-0.011 Sum_probs=115.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC-C----C-CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP-S----W-FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~-~----~-~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||++++++|++ +|++|+..+|+... . . ...+.+. .+.+|++|+++++++++.+ . .+|+++|.
T Consensus 20 IG~aia~~la~------~G~~vil~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~linn 91 (262)
T PRK07984 20 IAYGIAQAMHR------EGAELAFTYQNDKLKGRVEEFAAQLGSDI-VLPCDVAEDASIDAMFAELGKVWP-KFDGFVHS 91 (262)
T ss_pred HHHHHHHHHHH------CCCEEEEEecchhHHHHHHHHHhccCCce-EeecCCCCHHHHHHHHHHHHhhcC-CCCEEEEC
Confidence 78999999999 89999888876311 0 0 0123456 7899999999988776542 2 38999999
Q ss_pred eeecCC-----------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 72 MFQRLK-----------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 72 A~~~~~-----------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+.... + .+..+++|+.|...+.+++...++ . + .+||++||.... .
T Consensus 92 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~-g~Iv~iss~~~~-----------------~ 151 (262)
T PRK07984 92 IGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P-G-SALLTLSYLGAE-----------------R 151 (262)
T ss_pred CccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C-C-cEEEEEecCCCC-----------------C
Confidence 985211 1 124568999998888888754321 1 2 478888775311 0
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+. |. ...|+.+|...+ ...++.+..+-|+.|--+-........ ....... ...|+
T Consensus 152 ~~-------~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~---~~~~~~~--~~~p~-- 216 (262)
T PRK07984 152 AI-------PN-YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFR---KMLAHCE--AVTPI-- 216 (262)
T ss_pred CC-------CC-cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchH---HHHHHHH--HcCCC--
Confidence 10 10 224777665433 346899999999877443110000000 0000110 11111
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
.-+...+|+++++++++... ...|+...+.+|
T Consensus 217 ----------~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg 250 (262)
T PRK07984 217 ----------RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 250 (262)
T ss_pred ----------cCCCCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence 12356788999988887532 234777766555
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.8e-06 Score=74.16 Aligned_cols=143 Identities=8% Similarity=-0.006 Sum_probs=91.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||..++++|++ +|++|++++|+..... .....+. .+.+|++|++++.++++.+ +..+|+++|
T Consensus 17 IG~aia~~la~------~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~ 89 (227)
T PRK08862 17 LGRTISCHFAR------LGATLILCDQDQSALKDTYEQCSALTDNVY-SFQLKDFSQESIRHLFDAIEQQFNRAPDVLVN 89 (227)
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHHHhcCCCeE-EEEccCCCHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 79999999999 8999999998754310 0123466 7889999999887766432 202899999
Q ss_pred eeeec-CC------Chh---HhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQR-LK------SEE---INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~-~~------~~~---~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
.|+.. .. +.+ +.+.+|+.++..+++++...++...+-.++|++||...+ +
T Consensus 90 nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------------------~-- 149 (227)
T PRK08862 90 NWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH------------------Q-- 149 (227)
T ss_pred CCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC------------------C--
Confidence 99631 11 222 355778888888877765543211112478888874211 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
+...|+.+|..-+ ...++.+..+.|+.+-..
T Consensus 150 --------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 150 --------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred --------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 0122665554322 356899999999877554
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=7.8e-06 Score=74.12 Aligned_cols=143 Identities=15% Similarity=0.162 Sum_probs=90.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--C-CCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--P-SSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~-~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||..++++|.+ |++|+.++|+.... .. . ...+. ++.+|++|+++++++++.+ . ++|+++
T Consensus 12 IG~aia~~l~~-------g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~id~lv 82 (246)
T PRK05599 12 IAGEIATLLCH-------GEDVVLAARRPEAAQGLASDLRQRGATSVH-VLSFDAQDLDTHRELVKQTQELAG-EISLAV 82 (246)
T ss_pred HHHHHHHHHhC-------CCEEEEEeCCHHHHHHHHHHHHhccCCceE-EEEcccCCHHHHHHHHHHHHHhcC-CCCEEE
Confidence 79999999864 79999999875321 00 1 12477 8999999999887766432 3 389999
Q ss_pred EeeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|.|+.... + ..+...+|+.+..+++.++...++....-.+||++||...+- +.
T Consensus 83 ~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------------~~- 144 (246)
T PRK05599 83 VAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR-----------------AR- 144 (246)
T ss_pred EecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc-----------------CC-
Confidence 99985321 1 123467888888777766543321011124899998864221 00
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeee
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyG 178 (360)
| ....|+.+|...+ ...++.+..+.|+.|..
T Consensus 145 ------~-~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T 185 (246)
T PRK05599 145 ------R-ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIG 185 (246)
T ss_pred ------c-CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccc
Confidence 0 1223666664322 34688999999987754
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-05 Score=75.46 Aligned_cols=145 Identities=11% Similarity=-0.007 Sum_probs=94.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC---------C------CC--CCCCceeeEeeccCChHHHHHHHccC---
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP---------S------WF--PSSHVDHYITFDALDSTDTTQKLSSI--- 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~---------~------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~--- 61 (360)
||.+++++|++ .|++|++++|+... . .. ...++. ++.+|++|+++++++++.+
T Consensus 20 IG~aia~~la~------~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~ 92 (305)
T PRK08303 20 AGRGIAVELGA------AGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGI-AVQVDHLVPEQVRALVERIDRE 92 (305)
T ss_pred HHHHHHHHHHH------CCCEEEEEecccccccccccccchHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHH
Confidence 79999999998 89999999987321 0 00 112466 8999999999887776543
Q ss_pred -CCCccEEEEee-eec------CC-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCC
Q 037566 62 -SQEVTHLFWVM-FQR------LK-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDP 126 (360)
Q Consensus 62 -~~~v~~V~h~A-~~~------~~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~ 126 (360)
. .+|+++|.| +.. .. +..+.+++|+.++..++.++...++.. +-.+||++||....-.
T Consensus 93 ~g-~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~-~~g~IV~isS~~~~~~----- 165 (305)
T PRK08303 93 QG-RLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR-PGGLVVEITDGTAEYN----- 165 (305)
T ss_pred cC-CccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC-CCcEEEEECCcccccc-----
Confidence 2 289999998 531 11 123467899999999988887654312 1257999887532100
Q ss_pred cccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCee
Q 037566 127 SLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIII 177 (360)
Q Consensus 127 ~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vy 177 (360)
..+ .+ ....|+.+|.... ...|+.+..+.|+.|-
T Consensus 166 ---------~~~----~~----~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~ 209 (305)
T PRK08303 166 ---------ATH----YR----LSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLR 209 (305)
T ss_pred ---------CcC----CC----CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccc
Confidence 000 00 1234777665322 3468999999997764
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.1e-05 Score=77.40 Aligned_cols=102 Identities=13% Similarity=0.116 Sum_probs=66.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--C----CCCCCceeeEeeccCChHHHHH-HHccCCCCccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--W----FPSSHVDHYITFDALDSTDTTQ-KLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~----~~~~~v~~~v~gDl~d~~~l~~-~l~~~~~~v~~V~h~A~~ 74 (360)
+|+.+++.|++ +|+.|++++|+.... . ..+.... .+..|...+.++.. ..+.+...+..+.-+++.
T Consensus 91 vG~~iv~~llk------rgf~vra~VRd~~~a~~~~~~~~~d~~~~-~v~~~~~~~~d~~~~~~~~~~~~~~~v~~~~gg 163 (411)
T KOG1203|consen 91 VGRRIVKILLK------RGFSVRALVRDEQKAEDLLGVFFVDLGLQ-NVEADVVTAIDILKKLVEAVPKGVVIVIKGAGG 163 (411)
T ss_pred hhHHHHHHHHH------CCCeeeeeccChhhhhhhhcccccccccc-eeeeccccccchhhhhhhhccccceeEEecccC
Confidence 69999999999 999999999986432 1 1245566 67777766654433 333221001223223322
Q ss_pred cCCCh---hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccC
Q 037566 75 RLKSE---EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGT 116 (360)
Q Consensus 75 ~~~~~---~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~ 116 (360)
.+.+ ..-..|--.|+.|+++||..+ |++|||++||.
T Consensus 164 -rp~~ed~~~p~~VD~~g~knlvdA~~~a-----Gvk~~vlv~si 202 (411)
T KOG1203|consen 164 -RPEEEDIVTPEKVDYEGTKNLVDACKKA-----GVKRVVLVGSI 202 (411)
T ss_pred -CCCcccCCCcceecHHHHHHHHHHHHHh-----CCceEEEEEee
Confidence 2222 234578899999999999887 89999999765
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.4e-06 Score=75.35 Aligned_cols=107 Identities=13% Similarity=0.116 Sum_probs=72.1
Q ss_pred chHHHHHHHhcCCCCCCCCc-EEEEEecCCC-CCC---------CCCCCceeeEeeccCChHHHHHHHccCC---CCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPW-KVYGTARRPP-PSW---------FPSSHVDHYITFDALDSTDTTQKLSSIS---QEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~-~V~~l~r~~~-~~~---------~~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~ 67 (360)
||..+++.|.+ +|. +|+.+.|++. ... .....++ ++.+|++|++++.++++.+. .+++-
T Consensus 12 lg~~la~~La~------~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~-~~~~Dv~d~~~v~~~~~~~~~~~~~i~g 84 (181)
T PF08659_consen 12 LGQSLARWLAE------RGARRLILLGRSGAPSAEAEAAIRELESAGARVE-YVQCDVTDPEAVAAALAQLRQRFGPIDG 84 (181)
T ss_dssp HHHHHHHHHHH------TT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEE-EEE--TTSHHHHHHHHHTSHTTSS-EEE
T ss_pred HHHHHHHHHHH------cCCCEEEEeccCCCccHHHHHHHHHHHhCCCcee-eeccCccCHHHHHHHHHHHHhccCCcce
Confidence 68999999998 554 6999999831 110 1235688 99999999999999987753 13788
Q ss_pred EEEeeeecCC------Ch---hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc-ccc
Q 037566 68 LFWVMFQRLK------SE---EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK-HYM 120 (360)
Q Consensus 68 V~h~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~-vYg 120 (360)
|||+|+...+ ++ ...+...+.|+.||.++.... .+++||+.||.+ ++|
T Consensus 85 Vih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-----~l~~~i~~SSis~~~G 142 (181)
T PF08659_consen 85 VIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-----PLDFFILFSSISSLLG 142 (181)
T ss_dssp EEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-----TTSEEEEEEEHHHHTT
T ss_pred eeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-----CCCeEEEECChhHhcc
Confidence 9999985321 23 345678899999999998765 689999998865 344
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.29 E-value=6.5e-06 Score=75.38 Aligned_cols=107 Identities=18% Similarity=0.065 Sum_probs=78.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHc----cCCCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLS----SISQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V 68 (360)
||.+++.+|.. .|..++.+.|+.... .....++. .+++|++|.+++.++++ ... ++||+
T Consensus 24 IG~~lA~~la~------~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~-~~~~Dvs~~~~~~~~~~~~~~~fg-~vDvL 95 (282)
T KOG1205|consen 24 IGEALAYELAK------RGAKLVLVARRARRLERVAEELRKLGSLEKVL-VLQLDVSDEESVKKFVEWAIRHFG-RVDVL 95 (282)
T ss_pred HHHHHHHHHHh------CCCceEEeehhhhhHHHHHHHHHHhCCcCccE-EEeCccCCHHHHHHHHHHHHHhcC-CCCEE
Confidence 79999999999 899877666654321 11112588 99999999999887763 333 38999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK 117 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~ 117 (360)
++-|++... +....+++|+.|+..+..++...|+... =.|||.+||.+
T Consensus 96 VNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSia 152 (282)
T KOG1205|consen 96 VNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIA 152 (282)
T ss_pred EecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccc
Confidence 999995432 2234789999999999999987765232 35899999874
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.6e-06 Score=70.55 Aligned_cols=104 Identities=14% Similarity=0.040 Sum_probs=77.9
Q ss_pred chHHHHHHHhcCCCCCCC-CcEEEEEecC--CCCC-----CC--CCCCceeeEeeccCChHHHHHHHccCC---CCccEE
Q 037566 2 AGLSLAEALKNNPTIPGG-PWKVYGTARR--PPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~--~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V 68 (360)
||..++++|++ + ++.|+.++|+ .... .+ ...++. ++++|++++++++++++.+. .++|++
T Consensus 12 iG~~~a~~l~~------~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ld~l 84 (167)
T PF00106_consen 12 IGRALARALAR------RGARVVILTSRSEDSEGAQELIQELKAPGAKIT-FIECDLSDPESIRALIEEVIKRFGPLDIL 84 (167)
T ss_dssp HHHHHHHHHHH------TTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEE-EEESETTSHHHHHHHHHHHHHHHSSESEE
T ss_pred HHHHHHHHHHh------cCceEEEEeeecccccccccccccccccccccc-ccccccccccccccccccccccccccccc
Confidence 69999999999 6 5568888887 1110 00 236778 99999999999888776543 138999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK 117 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~ 117 (360)
||+|+.... ..+.++++|+.+...+.+++... +-.+||++||..
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~g~iv~~sS~~ 137 (167)
T PF00106_consen 85 INNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-----GGGKIVNISSIA 137 (167)
T ss_dssp EEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-----TTEEEEEEEEGG
T ss_pred ccccccccccccccccchhhhhccccccceeeeeeehheec-----cccceEEecchh
Confidence 999985332 23457899999999999999874 457899998864
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.4e-05 Score=65.67 Aligned_cols=138 Identities=13% Similarity=0.128 Sum_probs=89.2
Q ss_pred chHHHHHHHhcCCCCCCCCcE-EEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC--CC
Q 037566 2 AGLSLAEALKNNPTIPGGPWK-VYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL--KS 78 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~-V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~--~~ 78 (360)
.|+-|++.+++ . ..++ |+++.|+..........+. .+..|...-+++....+| +|+.|-+-+... .-
T Consensus 30 ~G~~llk~~~E----~-~~FSKV~~i~RR~~~d~at~k~v~-q~~vDf~Kl~~~a~~~qg----~dV~FcaLgTTRgkaG 99 (238)
T KOG4039|consen 30 CGGGLLKHAQE----A-PQFSKVYAILRRELPDPATDKVVA-QVEVDFSKLSQLATNEQG----PDVLFCALGTTRGKAG 99 (238)
T ss_pred ccHHHHHHHHh----c-ccceeEEEEEeccCCCccccceee-eEEechHHHHHHHhhhcC----CceEEEeecccccccc
Confidence 58899999998 1 2344 9999998543222234555 778888877778888788 465553334332 23
Q ss_pred hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH---
Q 037566 79 EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV--- 155 (360)
Q Consensus 79 ~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~--- 155 (360)
.+.++++.-.-...+.++|.+. ||++|+++||..+- |+.++-|-+
T Consensus 100 adgfykvDhDyvl~~A~~AKe~-----Gck~fvLvSS~GAd---------------------------~sSrFlY~k~KG 147 (238)
T KOG4039|consen 100 ADGFYKVDHDYVLQLAQAAKEK-----GCKTFVLVSSAGAD---------------------------PSSRFLYMKMKG 147 (238)
T ss_pred cCceEeechHHHHHHHHHHHhC-----CCeEEEEEeccCCC---------------------------cccceeeeeccc
Confidence 4567788777777777887765 89999999986321 112344543
Q ss_pred --HHHHHhcCCCCcEEEEcCCCeeecCCC
Q 037566 156 --EDIAASYSPAVTYSVHRSSIIIGASSR 182 (360)
Q Consensus 156 --ek~l~e~~~~~~~~ilRp~~vyGp~~~ 182 (360)
|+-+.| -.-=+++|+||+.+.|.++.
T Consensus 148 EvE~~v~e-L~F~~~~i~RPG~ll~~R~e 175 (238)
T KOG4039|consen 148 EVERDVIE-LDFKHIIILRPGPLLGERTE 175 (238)
T ss_pred hhhhhhhh-ccccEEEEecCcceeccccc
Confidence 333333 11125799999999997754
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.8e-05 Score=72.94 Aligned_cols=160 Identities=11% Similarity=0.020 Sum_probs=104.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC---CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI---SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~---~~~v~~V~ 69 (360)
||...+++|.. +|.+|+...|+.... ......+. ++++||.|.+++++..+.. ..+.|+++
T Consensus 47 IG~eta~~La~------~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~-~~~lDLssl~SV~~fa~~~~~~~~~ldvLI 119 (314)
T KOG1208|consen 47 IGFETARELAL------RGAHVVLACRNEERGEEAKEQIQKGKANQKIR-VIQLDLSSLKSVRKFAEEFKKKEGPLDVLI 119 (314)
T ss_pred hHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceE-EEECCCCCHHHHHHHHHHHHhcCCCccEEE
Confidence 79999999999 899999999985221 11235667 8999999999987765432 11378888
Q ss_pred EeeeecCC-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 70 WVMFQRLK-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 70 h~A~~~~~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
+.|++... ..+..+.+|..|...|.+.+...+|.+. ..|||++||... +... + -...-.|.
T Consensus 120 nNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~-~~~~-------~---~~~l~~~~ 187 (314)
T KOG1208|consen 120 NNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILG-GGKI-------D---LKDLSGEK 187 (314)
T ss_pred eCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccc-cCcc-------c---hhhccchh
Confidence 88985322 2456789999998888887765544232 279999998765 2110 0 01112222
Q ss_pred CCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCC
Q 037566 143 SLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASS 181 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~ 181 (360)
..... ....|+++|+.-. ...|+.+..+-|+.|..++-
T Consensus 188 ~~~~~-~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l 234 (314)
T KOG1208|consen 188 AKLYS-SDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL 234 (314)
T ss_pred ccCcc-chhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence 22111 1113888886432 12389999999999988743
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.11 E-value=2e-05 Score=72.11 Aligned_cols=109 Identities=22% Similarity=0.198 Sum_probs=80.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C-C--CCCCceeeEeeccCChHHHHHHHccCC---CCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W-F--PSSHVDHYITFDALDSTDTTQKLSSIS---QEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~-~--~~~~v~~~v~gDl~d~~~l~~~l~~~~---~~v~~V~ 69 (360)
||-.|+.++.. +|++|+++.|..... + + ....|. +..+|+.|-+++...+++.. ..+|++|
T Consensus 45 lgl~la~e~~~------~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~-~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~ 117 (331)
T KOG1210|consen 45 LGLALALECKR------EGADVTITARSGKKLLEAKAELELLTQVEDVS-YKSVDVIDYDSVSKVIEELRDLEGPIDNLF 117 (331)
T ss_pred hhHHHHHHHHH------ccCceEEEeccHHHHHHHHhhhhhhhccceee-EeccccccHHHHHHHHhhhhhccCCcceEE
Confidence 57889999998 899999999975331 1 1 123478 99999999999888877662 1389999
Q ss_pred EeeeecCC------Ch---hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc
Q 037566 70 WVMFQRLK------SE---EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK 117 (360)
Q Consensus 70 h~A~~~~~------~~---~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~ 117 (360)
+||+...+ ++ +..+++|-.||.|+..++..+||......+|+++||..
T Consensus 118 ~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~ 174 (331)
T KOG1210|consen 118 CCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQL 174 (331)
T ss_pred EecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhh
Confidence 99984321 33 34679999999999999988876221123888887753
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.7e-06 Score=59.76 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=24.5
Q ss_pred ccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 323 QHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 323 ~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
..+.|++||++ |||+|++|++|+++++.+|++++
T Consensus 24 ~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n 58 (62)
T PF13950_consen 24 HLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN 58 (62)
T ss_dssp EE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred hhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence 46899999976 89999999999999999999875
|
... |
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00016 Score=66.46 Aligned_cols=106 Identities=10% Similarity=-0.007 Sum_probs=73.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCC-CCCceeeEeeccCChHHHHHHHccCC-----CCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFP-SSHVDHYITFDALDSTDTTQKLSSIS-----QEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~-~~~v~~~v~gDl~d~~~l~~~l~~~~-----~~v~~V~h~ 71 (360)
.|..|+++|.+ +|+.|.+-.-.+... ... .++.. -++.|++++++++++.+-+. .+.-.|+|.
T Consensus 41 fG~~LA~~L~~------~Gf~V~Agcl~~~gae~L~~~~~s~rl~-t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNN 113 (322)
T KOG1610|consen 41 FGRLLAKKLDK------KGFRVFAGCLTEEGAESLRGETKSPRLR-TLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNN 113 (322)
T ss_pred HHHHHHHHHHh------cCCEEEEEeecCchHHHHhhhhcCCcce-eEeeccCCHHHHHHHHHHHHHhcccccceeEEec
Confidence 48899999998 999998877443321 112 57888 88999999999988765211 024568999
Q ss_pred eeecC---C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccC
Q 037566 72 MFQRL---K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGT 116 (360)
Q Consensus 72 A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~ 116 (360)
|++.. + +.....++|..||..+-.+....-|.+. .|||++||.
T Consensus 114 AGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~ 166 (322)
T KOG1610|consen 114 AGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSV 166 (322)
T ss_pred cccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEeccc
Confidence 98532 1 3456789999999888887643211122 489999885
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.95 E-value=6.6e-05 Score=87.19 Aligned_cols=74 Identities=7% Similarity=0.137 Sum_probs=57.3
Q ss_pred CCceeeEeeccCChHHHHHHHccCCC--CccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCC
Q 037566 38 SHVDHYITFDALDSTDTTQKLSSISQ--EVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSR 106 (360)
Q Consensus 38 ~~v~~~v~gDl~d~~~l~~~l~~~~~--~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~ 106 (360)
..+. ++.+|++|.+++.++++.+.. ++|.|+|.|++... +....+++|+.|+.++++++... .
T Consensus 2094 ~~v~-y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~-----~ 2167 (2582)
T TIGR02813 2094 ASAE-YASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAE-----N 2167 (2582)
T ss_pred CcEE-EEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHh-----C
Confidence 3577 899999999998887765420 27999999985321 23457899999999999999775 4
Q ss_pred ccEEEEeccCc
Q 037566 107 LRHVTLLMGTK 117 (360)
Q Consensus 107 v~r~v~~SS~~ 117 (360)
.++||++||..
T Consensus 2168 ~~~IV~~SSva 2178 (2582)
T TIGR02813 2168 IKLLALFSSAA 2178 (2582)
T ss_pred CCeEEEEechh
Confidence 67899998864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.85 E-value=5.6e-05 Score=65.50 Aligned_cols=110 Identities=14% Similarity=0.071 Sum_probs=78.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CC-CCCCceeeEeeccCChHHHHHHHccCC----CCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WF-PSSHVDHYITFDALDSTDTTQKLSSIS----QEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~-~~~~v~~~v~gDl~d~~~l~~~l~~~~----~~v~~V~h~A~~~ 75 (360)
||.+|++++.+ +|+.|++..|+-... .+ ...++. ....|+++++++.+....+. .+.|.+++-|+..
T Consensus 20 IG~ala~ef~~------~G~~V~AtaR~~e~M~~L~~~~gl~-~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~ 92 (289)
T KOG1209|consen 20 IGYALAKEFAR------NGYLVYATARRLEPMAQLAIQFGLK-PYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQS 92 (289)
T ss_pred hhHHHHHHHHh------CCeEEEEEccccchHhhHHHhhCCe-eEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCC
Confidence 79999999999 999999999986542 12 145788 89999999998877654432 2478889888853
Q ss_pred C--C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcccc
Q 037566 76 L--K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120 (360)
Q Consensus 76 ~--~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg 120 (360)
- + +-+.++++||-|..++.+|...-. ...-..+|++.|..+|-
T Consensus 93 C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~l--ikaKGtIVnvgSl~~~v 144 (289)
T KOG1209|consen 93 CTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFL--IKAKGTIVNVGSLAGVV 144 (289)
T ss_pred cccccccCCHHHHHhhhccceeeeehHHHHHHHHH--HHccceEEEecceeEEe
Confidence 2 1 345688999998888777764210 00123699998887663
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00027 Score=66.17 Aligned_cols=195 Identities=11% Similarity=0.019 Sum_probs=110.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----------C------CCC----CCceeeEeecc--CChH-------
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----------W------FPS----SHVDHYITFDA--LDST------- 52 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----------~------~~~----~~v~~~v~gDl--~d~~------- 52 (360)
||.+++++|.+ .|.+|++ .|+.... . ... .... .+.+|+ .+++
T Consensus 23 IG~a~A~~la~------~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 94 (303)
T PLN02730 23 YGWAIAKALAA------AGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITK-VYPLDAVFDTPEDVPEDVK 94 (303)
T ss_pred HHHHHHHHHHH------CCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCe-eeecceecCccccCchhhh
Confidence 79999999999 9999887 4431110 0 000 1135 788898 3333
Q ss_pred -----------HHHHHHcc----CCCCccEEEEeeeec----CC-------ChhHhhhhhHHHHHHHHHHHHhhccCCCC
Q 037566 53 -----------DTTQKLSS----ISQEVTHLFWVMFQR----LK-------SEEINISNNSTMFKNVMSVVVDSNKGRSR 106 (360)
Q Consensus 53 -----------~l~~~l~~----~~~~v~~V~h~A~~~----~~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~ 106 (360)
++.++++. .. ++|.++|+|+.. .+ +....+++|+.+..++++++...|+. +
T Consensus 95 ~~~~~~~~~~~~v~~l~~~i~~~~G-~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~--~ 171 (303)
T PLN02730 95 TNKRYAGSSNWTVQEVAESVKADFG-SIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNP--G 171 (303)
T ss_pred cccccccCCHHHHHHHHHHHHHHcC-CCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--C
Confidence 55555443 23 389999999631 11 23457899999999999998876532 2
Q ss_pred ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cC-CCCcEEEEcCCC
Q 037566 107 LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YS-PAVTYSVHRSSI 175 (360)
Q Consensus 107 v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~-~~~~~~ilRp~~ 175 (360)
.++|++||..... + .|.....|+.+|...+ .. .++.+..+-|+.
T Consensus 172 -G~II~isS~a~~~-----------------~-------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~ 226 (303)
T PLN02730 172 -GASISLTYIASER-----------------I-------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGP 226 (303)
T ss_pred -CEEEEEechhhcC-----------------C-------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCC
Confidence 4799998754211 0 0100123776665332 23 589999999987
Q ss_pred eeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 176 IIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 176 vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
|--+-... +.... ..+.... ...|+ + .+...++++.++++++... ...|+.+.+.+|
T Consensus 227 v~T~~~~~-~~~~~--~~~~~~~--~~~pl---~---------r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG 285 (303)
T PLN02730 227 LGSRAAKA-IGFID--DMIEYSY--ANAPL---Q---------KELTADEVGNAAAFLASPLASAITGATIYVDNG 285 (303)
T ss_pred ccCchhhc-ccccH--HHHHHHH--hcCCC---C---------CCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 75432111 10000 0000000 01111 1 2346788999988887532 224777766444
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0003 Score=61.76 Aligned_cols=106 Identities=19% Similarity=0.083 Sum_probs=72.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||+.+..+|++ +|..+.+++.+..+. ......+- |+++|+++..+++++++.+ +. +|.++
T Consensus 17 IGl~~sk~Ll~------kgik~~~i~~~~En~~a~akL~ai~p~~~v~-F~~~DVt~~~~~~~~f~ki~~~fg~-iDIlI 88 (261)
T KOG4169|consen 17 IGLATSKALLE------KGIKVLVIDDSEENPEAIAKLQAINPSVSVI-FIKCDVTNRGDLEAAFDKILATFGT-IDILI 88 (261)
T ss_pred hhHHHHHHHHH------cCchheeehhhhhCHHHHHHHhccCCCceEE-EEEeccccHHHHHHHHHHHHHHhCc-eEEEE
Confidence 79999999999 898877776543221 12245677 9999999999988887643 33 89999
Q ss_pred EeeeecCC-ChhHhhhhhHHHHHHHHHHHHhhcc---CCCCccEEEEeccC
Q 037566 70 WVMFQRLK-SEEINISNNSTMFKNVMSVVVDSNK---GRSRLRHVTLLMGT 116 (360)
Q Consensus 70 h~A~~~~~-~~~~~~~vNv~gt~nll~a~~~~~~---~~~~v~r~v~~SS~ 116 (360)
+-|++..+ +.+....+|..|..|=...+...|+ ++ .-.-+|-.||.
T Consensus 89 NgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG-~GGiIvNmsSv 138 (261)
T KOG4169|consen 89 NGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGG-KGGIIVNMSSV 138 (261)
T ss_pred cccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCC-CCcEEEEeccc
Confidence 99997544 7888999997765554444433322 12 12347777763
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00013 Score=62.88 Aligned_cols=85 Identities=12% Similarity=-0.010 Sum_probs=63.1
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 4 LSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 4 ~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
..++++|++ +|++|++++|++... ......+. ++.+|++|++++.++++++ . .+|.+|+
T Consensus 13 g~la~~L~~------~G~~V~v~~R~~~~~~~l~~~l~~~~~i~-~~~~Dv~d~~sv~~~i~~~l~~~g-~id~lv~--- 81 (177)
T PRK08309 13 KRVSLWLCE------KGFHVSVIARREVKLENVKRESTTPESIT-PLPLDYHDDDALKLAIKSTIEKNG-PFDLAVA--- 81 (177)
T ss_pred HHHHHHHHH------CcCEEEEEECCHHHHHHHHHHhhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCeEEEE---
Confidence 459999998 899999999875321 11124577 8899999999988887653 2 1555554
Q ss_pred ecCCChhHhhhhhHHHHHHHHHHHHhhccCCCCcc----EEEEec
Q 037566 74 QRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLR----HVTLLM 114 (360)
Q Consensus 74 ~~~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~----r~v~~S 114 (360)
.+++.++.++.++|++. +++ ||+++=
T Consensus 82 ----------~vh~~~~~~~~~~~~~~-----gv~~~~~~~~h~~ 111 (177)
T PRK08309 82 ----------WIHSSAKDALSVVCREL-----DGSSETYRLFHVL 111 (177)
T ss_pred ----------eccccchhhHHHHHHHH-----ccCCCCceEEEEe
Confidence 35566789999999997 788 899874
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0011 Score=60.95 Aligned_cols=147 Identities=12% Similarity=-0.048 Sum_probs=97.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----------CCCCCCceeeEeeccCChHHHHHHH----ccCCCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKL----SSISQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l----~~~~~~v~~ 67 (360)
||.+++++|.+ .|.+|++.+|+.... .....++. .+.+|+++.+++.+++ +....++|.
T Consensus 20 IG~aia~~la~------~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~l~~~~~~~~~Gkidi 92 (270)
T KOG0725|consen 20 IGKAIALLLAK------AGAKVVITGRSEERLEETAQELGGLGYTGGKVL-AIVCDVSKEVDVEKLVEFAVEKFFGKIDI 92 (270)
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeE-EEECcCCCHHHHHHHHHHHHHHhCCCCCE
Confidence 79999999999 999999999975431 01134577 8999999987765544 342123899
Q ss_pred EEEeeeecCC----------ChhHhhhhhHHH-HHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 68 LFWVMFQRLK----------SEEINISNNSTM-FKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 68 V~h~A~~~~~----------~~~~~~~vNv~g-t~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
+++.|+.... ..+..+++|+.| +.++..++....+.+ +-..++++||.+.+...
T Consensus 93 Lvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~-~gg~I~~~ss~~~~~~~-------------- 157 (270)
T KOG0725|consen 93 LVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS-KGGSIVNISSVAGVGPG-------------- 157 (270)
T ss_pred EEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc-CCceEEEEeccccccCC--------------
Confidence 9999984321 234567999995 777777776542211 33568888776543210
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
.+.+ .+|+.+|..-+ ...|+++-.+-|+.|..+-
T Consensus 158 ---------~~~~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 158 ---------PGSG-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred ---------CCCc-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 0111 45776654322 5678999999999888764
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00077 Score=60.87 Aligned_cols=138 Identities=14% Similarity=0.029 Sum_probs=91.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCC----CCceeeEeeccCC-hHHHHHHHcc----CCCCcc
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPS----SHVDHYITFDALD-STDTTQKLSS----ISQEVT 66 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~----~~v~~~v~gDl~d-~~~l~~~l~~----~~~~v~ 66 (360)
||..++++|++ +|+.|+++.|+.... .... ..+. +...|+++ .++++.+++. .. .+|
T Consensus 17 iG~aia~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dvs~~~~~v~~~~~~~~~~~g-~id 88 (251)
T COG1028 17 IGRAIARALAR------EGARVVVAARRSEEEAAEALAAAIKEAGGGRAA-AVAADVSDDEESVEALVAAAEEEFG-RID 88 (251)
T ss_pred HHHHHHHHHHH------CCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEE-EEEecCCCCHHHHHHHHHHHHHHcC-CCC
Confidence 79999999998 899988888775420 0011 2456 77899998 8777665543 22 278
Q ss_pred EEEEeeeecC---C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 67 HLFWVMFQRL---K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 67 ~V~h~A~~~~---~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
.+++.|+... . ..+..+++|+.|...+.+++...++ .. +||.+||.... .. ..
T Consensus 89 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~--~~--~Iv~isS~~~~-~~------------~~ 151 (251)
T COG1028 89 ILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK--KQ--RIVNISSVAGL-GG------------PP 151 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh--hC--eEEEECCchhc-CC------------CC
Confidence 8999998532 1 2345789999999999986655421 11 89999887543 21 00
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCe
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSII 176 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~v 176 (360)
. ...|+.+|.... ...|+.+..+-|+.+
T Consensus 152 ~------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~ 189 (251)
T COG1028 152 G------------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYI 189 (251)
T ss_pred C------------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccC
Confidence 0 123777665432 346788899988833
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0014 Score=57.64 Aligned_cols=147 Identities=14% Similarity=0.048 Sum_probs=93.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecC-CCC-C-----C-CCCCCceeeEeeccCChHHHHHHHccCC-----CCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARR-PPP-S-----W-FPSSHVDHYITFDALDSTDTTQKLSSIS-----QEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~-~~~-~-----~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~-----~~v~~V 68 (360)
||-.||++|+. .+|-++++-.++ +.. . + -.++++. .++.|+++-+++.+..+++. .+.+.+
T Consensus 15 IGlgLVk~llk-----~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvH-ii~Ldvt~deS~~~~~~~V~~iVg~~GlnlL 88 (249)
T KOG1611|consen 15 IGLGLVKELLK-----DKGIEVIIATARDPEKAATELALKSKSDSRVH-IIQLDVTCDESIDNFVQEVEKIVGSDGLNLL 88 (249)
T ss_pred hhHHHHHHHhc-----CCCcEEEEEecCChHHhhHHHHHhhccCCceE-EEEEecccHHHHHHHHHHHHhhcccCCceEE
Confidence 78899999998 267776655555 432 1 1 1368999 99999999888877665331 137888
Q ss_pred EEeeeecCC-------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCcc-----------EEEEeccCccccccccCCc
Q 037566 69 FWVMFQRLK-------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLR-----------HVTLLMGTKHYMGPVFDPS 127 (360)
Q Consensus 69 ~h~A~~~~~-------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~-----------r~v~~SS~~vYg~~~~~~~ 127 (360)
+..|++... + .-+.+++|+.|...+.+++....|.+ .-+ .+|++||... .
T Consensus 89 inNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkka-as~~~gd~~s~~raaIinisS~~~--s------ 159 (249)
T KOG1611|consen 89 INNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKA-ASKVSGDGLSVSRAAIINISSSAG--S------ 159 (249)
T ss_pred EeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHH-hhcccCCcccccceeEEEeecccc--c------
Confidence 888885211 2 23578999999988888764211100 112 5788877531 0
Q ss_pred ccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCee
Q 037566 128 LVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIII 177 (360)
Q Consensus 128 ~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vy 177 (360)
+| . ..+.+...|.++|.+.. +..++-++.+.|++|=
T Consensus 160 -~~-----------~--~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~ 205 (249)
T KOG1611|consen 160 -IG-----------G--FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ 205 (249)
T ss_pred -cC-----------C--CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence 01 0 11234567998886432 4567788889998883
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00041 Score=59.98 Aligned_cols=144 Identities=10% Similarity=0.032 Sum_probs=95.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h~A~~ 74 (360)
||..|++++++ .|.+|++..|+.... ....+.+. -..+|+.|.++.++.++ ..- .+++++++|++
T Consensus 17 IGl~lak~f~e------lgN~VIi~gR~e~~L~e~~~~~p~~~-t~v~Dv~d~~~~~~lvewLkk~~P-~lNvliNNAGI 88 (245)
T COG3967 17 IGLALAKRFLE------LGNTVIICGRNEERLAEAKAENPEIH-TEVCDVADRDSRRELVEWLKKEYP-NLNVLINNAGI 88 (245)
T ss_pred hhHHHHHHHHH------hCCEEEEecCcHHHHHHHHhcCcchh-eeeecccchhhHHHHHHHHHhhCC-chheeeecccc
Confidence 79999999999 899999999986431 11235565 68899999987655443 332 27889999995
Q ss_pred cCC-----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 75 RLK-----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 75 ~~~-----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
... +.++..++|..++..|..+...+....+ =.-+|-+||.-.+- | .+..
T Consensus 89 qr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafv-----------------P-m~~~ 149 (245)
T COG3967 89 QRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFV-----------------P-MAST 149 (245)
T ss_pred cchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccC-----------------c-cccc
Confidence 321 2345678999999988888765421111 23478888753321 1 2333
Q ss_pred CCCCCCCCcHHH--------HHHHHh--cCCCCcEEEEcCCCeeec
Q 037566 144 LRLPFPNFYYAV--------EDIAAS--YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 144 p~~p~p~~~Y~~--------ek~l~e--~~~~~~~~ilRp~~vyGp 179 (360)
|. |.. ++.|++ +..++.++-+=|+.|--+
T Consensus 150 Pv-------YcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 150 PV-------YCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred cc-------chhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 32 333 455666 456899999999888653
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00077 Score=63.49 Aligned_cols=103 Identities=10% Similarity=0.004 Sum_probs=74.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC--
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-- 76 (360)
||+.++..|.. .....+++.+|+..... .+.+.... ....+.+|++++.++++++ |.|+++|+...
T Consensus 20 VGs~~a~~l~~----~~~~~elvL~Di~~~~g~a~Dl~~~~~~-~~v~~~td~~~~~~~l~ga----DvVVitaG~~~~~ 90 (321)
T PTZ00325 20 IGQPLSLLLKQ----NPHVSELSLYDIVGAPGVAADLSHIDTP-AKVTGYADGELWEKALRGA----DLVLICAGVPRKP 90 (321)
T ss_pred HHHHHHHHHhc----CCCCCEEEEEecCCCcccccchhhcCcC-ceEEEecCCCchHHHhCCC----CEEEECCCCCCCC
Confidence 78999998885 11346799999843221 11111123 4556777777777889985 68999998632
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH 118 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v 118 (360)
.++.+.+..|+.+++++++++.++ +++++|+++|--+
T Consensus 91 ~~tR~dll~~N~~i~~~i~~~i~~~-----~~~~iviv~SNPv 128 (321)
T PTZ00325 91 GMTRDDLFNTNAPIVRDLVAAVASS-----APKAIVGIVSNPV 128 (321)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEecCcH
Confidence 256788999999999999999998 8999999987533
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0011 Score=61.98 Aligned_cols=141 Identities=7% Similarity=-0.020 Sum_probs=78.3
Q ss_pred ccEEEEeeeecC----C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcC
Q 037566 65 VTHLFWVMFQRL----K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 65 v~~V~h~A~~~~----~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
+|.++|.|+... + +....+++|+.|..++.+++...|+.. .++|.+||.....
T Consensus 120 lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~---G~ii~iss~~~~~------------- 183 (299)
T PRK06300 120 IDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPG---GSTISLTYLASMR------------- 183 (299)
T ss_pred CcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC---CeEEEEeehhhcC-------------
Confidence 899999996421 1 234567999999999999998765422 3688877643210
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cC-CCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YS-PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQG 202 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~-~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~ 202 (360)
+ .|.....|+.+|..-+ .. .|+.+..+.|+.|--+.... ..... .....+. ..
T Consensus 184 ----~-------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~-~~~~~--~~~~~~~--~~ 247 (299)
T PRK06300 184 ----A-------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKA-IGFIE--RMVDYYQ--DW 247 (299)
T ss_pred ----c-------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhc-ccccH--HHHHHHH--hc
Confidence 0 0110114777665332 23 48999999998775432110 00000 0000110 11
Q ss_pred CCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 203 LPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 203 ~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
.|+ + .....++++.++++++... ...|+++.+.+|
T Consensus 248 ~p~---~---------r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 284 (299)
T PRK06300 248 APL---P---------EPMEAEQVGAAAAFLVSPLASAITGETLYVDHG 284 (299)
T ss_pred CCC---C---------CCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 111 1 2345788999888876532 234788877544
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00029 Score=63.14 Aligned_cols=66 Identities=9% Similarity=-0.138 Sum_probs=45.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~ 75 (360)
++|+||+++|++ +|++|+.+++..... .+....+. .+.+|....+.+.++++..+ +|+|||+|++.
T Consensus 30 fiGs~LA~~L~~------~Ga~V~li~g~~~~~~~~~~~~~~~~-~V~s~~d~~~~l~~~~~~~~--~D~VIH~AAvs 98 (229)
T PRK09620 30 TIGRIIAEELIS------KGAHVIYLHGYFAEKPNDINNQLELH-PFEGIIDLQDKMKSIITHEK--VDAVIMAAAGS 98 (229)
T ss_pred HHHHHHHHHHHH------CCCeEEEEeCCCcCCCcccCCceeEE-EEecHHHHHHHHHHHhcccC--CCEEEECcccc
Confidence 589999999999 999999998643211 11122344 56664444457777776443 69999999863
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00086 Score=60.20 Aligned_cols=87 Identities=11% Similarity=0.063 Sum_probs=51.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCCh--HHHHHHHccCCCCccEEEEeeeecCCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDS--TDTTQKLSSISQEVTHLFWVMFQRLKS 78 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~--~~l~~~l~~~~~~v~~V~h~A~~~~~~ 78 (360)
++|++|+++|++ +|++|++++|+.........+++ ++.++-.+. +.+.+.+++ +|+|||+|+.....
T Consensus 27 ~iG~aLA~~L~~------~G~~V~li~r~~~~~~~~~~~v~-~i~v~s~~~m~~~l~~~~~~----~DivIh~AAvsd~~ 95 (229)
T PRK06732 27 QLGKIIAETFLA------AGHEVTLVTTKTAVKPEPHPNLS-IIEIENVDDLLETLEPLVKD----HDVLIHSMAVSDYT 95 (229)
T ss_pred HHHHHHHHHHHh------CCCEEEEEECcccccCCCCCCeE-EEEEecHHHHHHHHHHHhcC----CCEEEeCCccCCce
Confidence 479999999999 99999999876432111124677 766543321 344445544 68999999975321
Q ss_pred h-hHhhhhhHHHHHHHHHHHH
Q 037566 79 E-EINISNNSTMFKNVMSVVV 98 (360)
Q Consensus 79 ~-~~~~~vNv~gt~nll~a~~ 98 (360)
+ ...-..|...+.++.+.++
T Consensus 96 ~~~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 96 PVYMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred ehhhhhhhhhhhhhhhhhhhc
Confidence 1 1122334444455555543
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.004 Score=57.05 Aligned_cols=107 Identities=10% Similarity=-0.056 Sum_probs=72.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F-PSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~-~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h~ 71 (360)
+|+.++.++.+ +|..+...|.++.... . ....+. ...+|++|++++.+..+ ++.. |+.+++-
T Consensus 50 lGr~ialefa~------rg~~~vl~Din~~~~~etv~~~~~~g~~~-~y~cdis~~eei~~~a~~Vk~e~G~-V~ILVNN 121 (300)
T KOG1201|consen 50 LGRLIALEFAK------RGAKLVLWDINKQGNEETVKEIRKIGEAK-AYTCDISDREEIYRLAKKVKKEVGD-VDILVNN 121 (300)
T ss_pred HHHHHHHHHHH------hCCeEEEEeccccchHHHHHHHHhcCcee-EEEecCCCHHHHHHHHHHHHHhcCC-ceEEEec
Confidence 69999999999 8998888887764421 0 112577 89999999998755443 3443 8999999
Q ss_pred eeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc
Q 037566 72 MFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK 117 (360)
Q Consensus 72 A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~ 117 (360)
|++... + -+.++++|+.|.....+|....|-.. +=.|+|-++|+.
T Consensus 122 AGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~IaS~a 175 (300)
T KOG1201|consen 122 AGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIASVA 175 (300)
T ss_pred cccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEehhhh
Confidence 995321 2 23478999998766555543322111 234899887764
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0036 Score=59.04 Aligned_cols=100 Identities=9% Similarity=-0.049 Sum_probs=70.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC--
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-- 76 (360)
||++++..|.. .+...+++.+|+.+... .+.+.... ....++.+.+++.++++++ |.|+|+|+...
T Consensus 30 VG~~~a~~l~~----~~~~~el~L~Di~~~~g~a~Dl~~~~~~-~~i~~~~~~~d~~~~l~~a----DiVVitAG~~~~~ 100 (323)
T PLN00106 30 IGQPLSLLMKM----NPLVSELHLYDIANTPGVAADVSHINTP-AQVRGFLGDDQLGDALKGA----DLVIIPAGVPRKP 100 (323)
T ss_pred HHHHHHHHHHh----CCCCCEEEEEecCCCCeeEchhhhCCcC-ceEEEEeCCCCHHHHcCCC----CEEEEeCCCCCCC
Confidence 78999999885 01234799999876321 11111222 2334655566688889985 78999998533
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEecc
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMG 115 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS 115 (360)
.+..+....|+..++++++++.++ +++++++++|
T Consensus 101 g~~R~dll~~N~~i~~~i~~~i~~~-----~p~aivivvS 135 (323)
T PLN00106 101 GMTRDDLFNINAGIVKTLCEAVAKH-----CPNALVNIIS 135 (323)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEeC
Confidence 267788999999999999999998 6889998865
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0044 Score=58.66 Aligned_cols=95 Identities=11% Similarity=0.037 Sum_probs=62.2
Q ss_pred CchHHHHHHHhcCCCCC-CCCcEEEEEecCCCCCCCCCCCceeeE------eeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIP-GGPWKVYGTARRPPPSWFPSSHVDHYI------TFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~-~~g~~V~~l~r~~~~~~~~~~~v~~~v------~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
+||++++..|+...-.. .++++|+.+++++....+.....+ +. .+|+....++.++++++ |.|+|+|+
T Consensus 13 ~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~D-l~d~~~~~~~~~~~~~~~~~~l~~a----DiVI~tAG 87 (325)
T cd01336 13 QIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVME-LQDCAFPLLKSVVATTDPEEAFKDV----DVAILVGA 87 (325)
T ss_pred HHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeee-hhhccccccCCceecCCHHHHhCCC----CEEEEeCC
Confidence 47999999998610000 023689999986532111111111 11 23554456677888885 78999999
Q ss_pred ecC---CChhHhhhhhHHHHHHHHHHHHhh
Q 037566 74 QRL---KSEEINISNNSTMFKNVMSVVVDS 100 (360)
Q Consensus 74 ~~~---~~~~~~~~vNv~gt~nll~a~~~~ 100 (360)
... .+..+.++.|+.-.+.+.+.+.++
T Consensus 88 ~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 88 MPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 632 256789999999999999998886
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0037 Score=53.33 Aligned_cols=88 Identities=15% Similarity=-0.020 Sum_probs=57.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h 70 (360)
||..++++|++ .|++|++++|+.... . .....+. ++.+|++|.+++.++++ ... .+|.++|
T Consensus 28 IG~aia~~l~~------~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~v~~~~~~~G-~iDilVn 99 (169)
T PRK06720 28 IGRNTALLLAK------QGAKVIVTDIDQESGQATVEEITNLGGEAL-FVSYDMEKQGDWQRVISITLNAFS-RIDMLFQ 99 (169)
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999998 899999999864321 0 0123466 78999999988776543 333 2899999
Q ss_pred eeeecCC-------ChhHhhhhhHHHHHHHHHHH
Q 037566 71 VMFQRLK-------SEEINISNNSTMFKNVMSVV 97 (360)
Q Consensus 71 ~A~~~~~-------~~~~~~~vNv~gt~nll~a~ 97 (360)
.|+.... +++.....|+.++......+
T Consensus 100 nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (169)
T PRK06720 100 NAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQL 133 (169)
T ss_pred CCCcCCCCCcccccchhHhhceeccHHHHHHHHH
Confidence 9985321 22223355666554444443
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.00088 Score=56.36 Aligned_cols=108 Identities=13% Similarity=-0.023 Sum_probs=74.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---CCCC-CceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---FPSS-HVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---~~~~-~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
||..++.+|.+ .|.+|+++.|.+.+.. .+.+ .++ .+.+|+.+.+.+.+++..+-. +|-+++-|++...
T Consensus 19 IG~~~v~~La~------aGA~ViAvaR~~a~L~sLV~e~p~~I~-Pi~~Dls~wea~~~~l~~v~p-idgLVNNAgvA~~ 90 (245)
T KOG1207|consen 19 IGKEIVLSLAK------AGAQVIAVARNEANLLSLVKETPSLII-PIVGDLSAWEALFKLLVPVFP-IDGLVNNAGVATN 90 (245)
T ss_pred ccHHHHHHHHh------cCCEEEEEecCHHHHHHHHhhCCccee-eeEecccHHHHHHHhhcccCc-hhhhhccchhhhc
Confidence 79999999998 8999999999875421 1223 377 899999999999998887653 7778887874321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK 117 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~ 117 (360)
+.+..+++|+.+..++.+...+..-.......+|-+||.+
T Consensus 91 ~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqa 139 (245)
T KOG1207|consen 91 HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQA 139 (245)
T ss_pred chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchh
Confidence 2334678999988887776433100000122478887753
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.025 Score=52.18 Aligned_cols=142 Identities=14% Similarity=0.063 Sum_probs=92.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC--CCCCceeeEeeccCChHH----HHHHHccCCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF--PSSHVDHYITFDALDSTD----TTQKLSSISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~--~~~~v~~~v~gDl~d~~~----l~~~l~~~~~~v~~V~ 69 (360)
||...+++|.. +|+.|+.++|..... .. ..-.+. ++..|.++.+. +++.+.+.+ |..++
T Consensus 61 IGKayA~eLAk------rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~-~i~~Dft~~~~~ye~i~~~l~~~~--VgILV 131 (312)
T KOG1014|consen 61 IGKAYARELAK------RGFNVVLISRTQEKLEAVAKEIEEKYKVEVR-IIAIDFTKGDEVYEKLLEKLAGLD--VGILV 131 (312)
T ss_pred chHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEE-EEEEecCCCchhHHHHHHHhcCCc--eEEEE
Confidence 79999999999 999999999986442 01 123467 88999998764 677778886 78999
Q ss_pred EeeeecCCCh-----------hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 70 WVMFQRLKSE-----------EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 70 h~A~~~~~~~-----------~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
+.+++..+.| +....+|+.++..+.+.....|-.. +=.-+|.+||.+ | ..
T Consensus 132 NNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-~~G~IvnigS~a------------g-----~~- 192 (312)
T KOG1014|consen 132 NNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-KKGIIVNIGSFA------------G-----LI- 192 (312)
T ss_pred ecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-CCceEEEecccc------------c-----cc-
Confidence 9999654322 2356788887666655554332211 123477887652 1 11
Q ss_pred CCCCCCCCCCC-CCcHHHHHHH--------Hh--cCCCCcEEEEcCCCeeec
Q 037566 139 FKEDSLRLPFP-NFYYAVEDIA--------AS--YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 139 ~~E~~p~~p~p-~~~Y~~ek~l--------~e--~~~~~~~~ilRp~~vyGp 179 (360)
|.| .+.|+.+|.. .+ +..|+.+-.+-|..|-.+
T Consensus 193 --------p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTk 236 (312)
T KOG1014|consen 193 --------PTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATK 236 (312)
T ss_pred --------cChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecc
Confidence 222 3457776652 22 567888888888777664
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0021 Score=54.03 Aligned_cols=90 Identities=16% Similarity=-0.014 Sum_probs=66.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccCCC---CccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSISQ---EVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~~~---~v~~V~h~A~~ 74 (360)
+|..-+++|.. +|.+|..++-..+... ....++. |...|++.+++++.++..++. .+|..++||++
T Consensus 21 lg~ataerlak------qgasv~lldlp~skg~~vakelg~~~v-f~padvtsekdv~aala~ak~kfgrld~~vncagi 93 (260)
T KOG1199|consen 21 LGKATAERLAK------QGASVALLDLPQSKGADVAKELGGKVV-FTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGI 93 (260)
T ss_pred ccHHHHHHHHh------cCceEEEEeCCcccchHHHHHhCCceE-EeccccCcHHHHHHHHHHHHhhccceeeeeeccce
Confidence 57888999998 9999999987655421 1246788 999999999999888764321 27899999974
Q ss_pred cCC------------C---hhHhhhhhHHHHHHHHHHHH
Q 037566 75 RLK------------S---EEINISNNSTMFKNVMSVVV 98 (360)
Q Consensus 75 ~~~------------~---~~~~~~vNv~gt~nll~a~~ 98 (360)
... + .+..+++|+.||.|+++-..
T Consensus 94 a~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a 132 (260)
T KOG1199|consen 94 AYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA 132 (260)
T ss_pred eeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence 211 2 23456899999999986543
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.025 Score=50.70 Aligned_cols=61 Identities=11% Similarity=0.036 Sum_probs=42.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h~A~~~ 75 (360)
||.+|+++|++ +|++|+.+++..... . .. ...+|+.+.+++.+.++ .... +|+++|+|+..
T Consensus 27 IG~AIA~~la~------~Ga~Vvlv~~~~~l~---~--~~-~~~~Dv~d~~s~~~l~~~v~~~~g~-iDiLVnnAgv~ 91 (227)
T TIGR02114 27 LGKIITETFLS------AGHEVTLVTTKRALK---P--EP-HPNLSIREIETTKDLLITLKELVQE-HDILIHSMAVS 91 (227)
T ss_pred HHHHHHHHHHH------CCCEEEEEcChhhcc---c--cc-CCcceeecHHHHHHHHHHHHHHcCC-CCEEEECCEec
Confidence 79999999999 999999887642110 1 11 24578888877665443 2332 79999999864
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.13 Score=48.44 Aligned_cols=99 Identities=14% Similarity=0.023 Sum_probs=65.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCC-CCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPS-SHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~-~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~ 76 (360)
||++++..|.. ....+++++.++|++... .+.+ +... .+.+ .+.+++.++++++ |.|+-+|+...
T Consensus 12 VG~aia~~l~~---~~~~~~el~L~d~~~~~~g~alDl~~~~~~~-~i~~--~~~~d~~~~l~~~----DiVIitaG~~~ 81 (312)
T PRK05086 12 IGQALALLLKT---QLPAGSELSLYDIAPVTPGVAVDLSHIPTAV-KIKG--FSGEDPTPALEGA----DVVLISAGVAR 81 (312)
T ss_pred HHHHHHHHHHc---CCCCccEEEEEecCCCCcceehhhhcCCCCc-eEEE--eCCCCHHHHcCCC----CEEEEcCCCCC
Confidence 68999987743 011456788888764321 1111 1122 3344 2334556777775 67887888532
Q ss_pred ---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEecc
Q 037566 77 ---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMG 115 (360)
Q Consensus 77 ---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS 115 (360)
.++.+.+..|+..++++++++.++ +++++|.+.|
T Consensus 82 ~~~~~R~dll~~N~~i~~~ii~~i~~~-----~~~~ivivvs 118 (312)
T PRK05086 82 KPGMDRSDLFNVNAGIVKNLVEKVAKT-----CPKACIGIIT 118 (312)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEcc
Confidence 256788999999999999999997 6888888865
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.058 Score=51.94 Aligned_cols=75 Identities=12% Similarity=0.083 Sum_probs=59.0
Q ss_pred chHHHHHHHhcCCCCCCCC-cEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC
Q 037566 2 AGLSLAEALKNNPTIPGGP-WKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~ 76 (360)
||+.++..|++ +| .+|++.+|.+... ....++++ ..+.|+.|.+++.+++++. |.|++++....
T Consensus 12 Vg~~va~~la~------~~d~~V~iAdRs~~~~~~i~~~~~~~v~-~~~vD~~d~~al~~li~~~----d~VIn~~p~~~ 80 (389)
T COG1748 12 VGSVVAHKLAQ------NGDGEVTIADRSKEKCARIAELIGGKVE-ALQVDAADVDALVALIKDF----DLVINAAPPFV 80 (389)
T ss_pred hHHHHHHHHHh------CCCceEEEEeCCHHHHHHHHhhccccce-eEEecccChHHHHHHHhcC----CEEEEeCCchh
Confidence 79999999998 56 8999999985432 11235899 9999999999999999995 78998874311
Q ss_pred CChhHhhhhhHHHHHHHHHHHHhh
Q 037566 77 KSEEINISNNSTMFKNVMSVVVDS 100 (360)
Q Consensus 77 ~~~~~~~~vNv~gt~nll~a~~~~ 100 (360)
+.++++||.++
T Consensus 81 -------------~~~i~ka~i~~ 91 (389)
T COG1748 81 -------------DLTILKACIKT 91 (389)
T ss_pred -------------hHHHHHHHHHh
Confidence 23788999887
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.16 Score=46.30 Aligned_cols=86 Identities=15% Similarity=0.149 Sum_probs=62.4
Q ss_pred hHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCChhH
Q 037566 3 GLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSEEI 81 (360)
Q Consensus 3 G~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~~~ 81 (360)
|+.|+++|.+ .||+|++..+..... .+...+.. .+..+..|.+++.+.+++.+ ++.|++++..
T Consensus 12 gr~la~~L~~------~g~~v~~s~~t~~~~~~~~~~g~~-~v~~g~l~~~~l~~~l~~~~--i~~VIDAtHP------- 75 (256)
T TIGR00715 12 SRAIAKGLIA------QGIEILVTVTTSEGKHLYPIHQAL-TVHTGALDPQELREFLKRHS--IDILVDATHP------- 75 (256)
T ss_pred HHHHHHHHHh------CCCeEEEEEccCCccccccccCCc-eEEECCCCHHHHHHHHHhcC--CCEEEEcCCH-------
Confidence 7899999998 899999999876432 12223344 56677888888989888765 7899887642
Q ss_pred hhhhhHHHHHHHHHHHHhhccCCCCccEEEE
Q 037566 82 NISNNSTMFKNVMSVVVDSNKGRSRLRHVTL 112 (360)
Q Consensus 82 ~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~ 112 (360)
+.. ..++|..+||.+. ++..+=|
T Consensus 76 -fA~--~is~~a~~a~~~~-----~ipylR~ 98 (256)
T TIGR00715 76 -FAA--QITTNATAVCKEL-----GIPYVRF 98 (256)
T ss_pred -HHH--HHHHHHHHHHHHh-----CCcEEEE
Confidence 112 3478999999987 6665555
|
This enzyme was found to be a monomer by gel filtration. |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.5 Score=44.72 Aligned_cols=89 Identities=12% Similarity=0.095 Sum_probs=60.2
Q ss_pred chHHHHHHHhcCCCCC-CCCcEEEEEecCCCCCCCCCCCceeeEeeccCCh-----------HHHHHHHccCCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIP-GGPWKVYGTARRPPPSWFPSSHVDHYITFDALDS-----------TDTTQKLSSISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~-~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~-----------~~l~~~l~~~~~~v~~V~ 69 (360)
||++++..|+...... ...++++.+|++... +..+ ....||.|. ....++++++ |.|+
T Consensus 12 VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-----~~~~-g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~a----DiVV 81 (323)
T cd00704 12 IGYNLLFLIASGELFGDDQPVILHLLDIPPAM-----KALE-GVVMELQDCAFPLLKGVVITTDPEEAFKDV----DVAI 81 (323)
T ss_pred HHHHHHHHHHhCCccCCCCceEEEEEecCCcc-----Cccc-eeeeehhhhcccccCCcEEecChHHHhCCC----CEEE
Confidence 7899999888611000 012358888886521 2234 555566654 3456777875 7899
Q ss_pred EeeeecC---CChhHhhhhhHHHHHHHHHHHHhh
Q 037566 70 WVMFQRL---KSEEINISNNSTMFKNVMSVVVDS 100 (360)
Q Consensus 70 h~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~ 100 (360)
|+|+... .+..+.+..|+.-.+++...+.+.
T Consensus 82 itAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 82 LVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred EeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 9998632 267788999999999999999886
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.56 Score=44.36 Aligned_cols=89 Identities=12% Similarity=0.114 Sum_probs=59.5
Q ss_pred chHHHHHHHhcCCCCC-CCCcEEEEEecCCCCCCCCCCCceeeEeeccCChH-----------HHHHHHccCCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIP-GGPWKVYGTARRPPPSWFPSSHVDHYITFDALDST-----------DTTQKLSSISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~-~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~-----------~l~~~l~~~~~~v~~V~ 69 (360)
||++++..|....... .+.++++.+|+.+.. +..+ -...||.|.. ...++++++ |.|+
T Consensus 11 VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~-----~~a~-g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~a----DiVV 80 (324)
T TIGR01758 11 IGYALLPMIARGRMLGKDQPIILHLLDIPPAM-----KVLE-GVVMELMDCAFPLLDGVVPTHDPAVAFTDV----DVAI 80 (324)
T ss_pred HHHHHHHHHHhccccCCCCccEEEEEecCCcc-----cccc-eeEeehhcccchhcCceeccCChHHHhCCC----CEEE
Confidence 7899999887500000 012258888886532 1234 5566666654 335666774 7899
Q ss_pred EeeeecC---CChhHhhhhhHHHHHHHHHHHHhh
Q 037566 70 WVMFQRL---KSEEINISNNSTMFKNVMSVVVDS 100 (360)
Q Consensus 70 h~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~ 100 (360)
|+|+... .+..+.+..|+.-.+.+.+.+.++
T Consensus 81 itAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 81 LVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred EcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 9998632 246788899999999999999886
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.26 Score=47.75 Aligned_cols=76 Identities=17% Similarity=0.234 Sum_probs=53.9
Q ss_pred chHHHHHHHhcCCCCCCCCc-EEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPW-KVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~-~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~ 75 (360)
+|+.+++.|++. ..+ +|++.+|+.... .....+++ ++..|+.|.+++.++++++ |.|+++++..
T Consensus 9 vG~~~~~~L~~~-----~~~~~v~va~r~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~~----dvVin~~gp~ 78 (386)
T PF03435_consen 9 VGSAIARLLARR-----GPFEEVTVADRNPEKAERLAEKLLGDRVE-AVQVDVNDPESLAELLRGC----DVVINCAGPF 78 (386)
T ss_dssp HHHHHHHHHHCT-----TCE-EEEEEESSHHHHHHHHT--TTTTEE-EEE--TTTHHHHHHHHTTS----SEEEE-SSGG
T ss_pred HHHHHHHHHhcC-----CCCCcEEEEECCHHHHHHHHhhcccccee-EEEEecCCHHHHHHHHhcC----CEEEECCccc
Confidence 799999999981 335 899999985431 11346899 9999999999999999996 6899987632
Q ss_pred CCChhHhhhhhHHHHHHHHHHHHhh
Q 037566 76 LKSEEINISNNSTMFKNVMSVVVDS 100 (360)
Q Consensus 76 ~~~~~~~~~vNv~gt~nll~a~~~~ 100 (360)
. ...++++|.++
T Consensus 79 ~-------------~~~v~~~~i~~ 90 (386)
T PF03435_consen 79 F-------------GEPVARACIEA 90 (386)
T ss_dssp G-------------HHHHHHHHHHH
T ss_pred h-------------hHHHHHHHHHh
Confidence 1 23567777766
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.33 Score=47.30 Aligned_cols=62 Identities=10% Similarity=0.014 Sum_probs=46.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHcc-CCCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS-ISQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~-~~~~v~~V~h~A~~~ 75 (360)
+|.+++++|.+ +|++|+.++++..... .. . ....|+++.+++.+++.. .. .+|.+||+|++.
T Consensus 216 ~G~aiA~~l~~------~Ga~V~~v~~~~~~~~--~~--~-~~~~dv~~~~~~~~~v~~~~~-~~DilI~~Aav~ 278 (399)
T PRK05579 216 MGYALARAAAR------RGADVTLVSGPVNLPT--PA--G-VKRIDVESAQEMLDAVLAALP-QADIFIMAAAVA 278 (399)
T ss_pred HHHHHHHHHHH------CCCEEEEeCCCccccC--CC--C-cEEEccCCHHHHHHHHHHhcC-CCCEEEEccccc
Confidence 69999999999 9999999988653211 12 2 456799999888777753 22 279999999864
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=91.21 E-value=0.65 Score=41.21 Aligned_cols=109 Identities=9% Similarity=-0.062 Sum_probs=64.7
Q ss_pred eEeeccCChHHHHHHH---ccCCCCccEEEEeeeecCC------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCc
Q 037566 43 YITFDALDSTDTTQKL---SSISQEVTHLFWVMFQRLK------------SEEINISNNSTMFKNVMSVVVDSNKGRSRL 107 (360)
Q Consensus 43 ~v~gDl~d~~~l~~~l---~~~~~~v~~V~h~A~~~~~------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v 107 (360)
+..+|+++...+.+.. +.-..+-+.|+|-|+...+ .+..+++.|+....-|.+.+...-|..+-.
T Consensus 58 ~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~ 137 (253)
T KOG1204|consen 58 HVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVN 137 (253)
T ss_pred eechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCcc
Confidence 5677777765433332 2111126889999984221 245688999988888887766542222223
Q ss_pred cEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh--------cCC-CCcEEEEcCCCe
Q 037566 108 RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS--------YSP-AVTYSVHRSSII 176 (360)
Q Consensus 108 ~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e--------~~~-~~~~~ilRp~~v 176 (360)
+-+|++||.+.- .|+. .-..|+.+|.+.+ +.+ +..+..++|+.|
T Consensus 138 ~~vVnvSS~aav-----------------~p~~--------~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvv 190 (253)
T KOG1204|consen 138 GNVVNVSSLAAV-----------------RPFS--------SWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVV 190 (253)
T ss_pred CeEEEecchhhh-----------------cccc--------HHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcc
Confidence 678899886432 1111 1234777776655 343 778888888655
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.70 E-value=0.8 Score=40.94 Aligned_cols=57 Identities=16% Similarity=0.078 Sum_probs=43.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-C--CCCCCceeeEeeccCChHHHHHH-HccCCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-W--FPSSHVDHYITFDALDSTDTTQK-LSSISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~--~~~~~v~~~v~gDl~d~~~l~~~-l~~~~~~v~~V~ 69 (360)
+|++|++.|.+ .||+|+++++.+... . .....+. .+.||-+|++.|+++ +.. .|+++
T Consensus 11 vG~~va~~L~~------~g~~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~~~~L~~agi~~----aD~vv 71 (225)
T COG0569 11 VGRSVARELSE------EGHNVVLIDRDEERVEEFLADELDTH-VVIGDATDEDVLEEAGIDD----ADAVV 71 (225)
T ss_pred HHHHHHHHHHh------CCCceEEEEcCHHHHHHHhhhhcceE-EEEecCCCHHHHHhcCCCc----CCEEE
Confidence 69999999999 999999999876432 1 1124567 899999999999886 444 56763
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=87.87 E-value=1.1 Score=35.01 Aligned_cols=49 Identities=29% Similarity=0.255 Sum_probs=37.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHH
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQK 57 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~ 57 (360)
+|..|++.|.+ .+++|+++++++... .+...++. ++.||.+|++.++++
T Consensus 9 ~~~~i~~~L~~------~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a 58 (116)
T PF02254_consen 9 IGREIAEQLKE------GGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERA 58 (116)
T ss_dssp HHHHHHHHHHH------TTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHT
T ss_pred HHHHHHHHHHh------CCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhc
Confidence 58899999998 778999999876321 11234588 999999999988875
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=87.84 E-value=1.4 Score=42.79 Aligned_cols=88 Identities=11% Similarity=0.012 Sum_probs=58.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHH-HHHHccCCCCccEEEEeeeecCC---
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDT-TQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l-~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
+|..++++|.. +|++|+.+.++..... .. . ....|+.+.+++ .++++......|.++++|++..-
T Consensus 213 ~g~~~a~~~~~------~Ga~V~~~~g~~~~~~--~~--~-~~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~ 281 (390)
T TIGR00521 213 MGLALAEAAYK------RGADVTLITGPVSLLT--PP--G-VKSIKVSTAEEMLEAALNELAKDFDIFISAAAVADFKPK 281 (390)
T ss_pred HHHHHHHHHHH------CCCEEEEeCCCCccCC--CC--C-cEEEEeccHHHHHHHHHHhhcccCCEEEEcccccccccc
Confidence 68999999999 9999999887653321 12 2 456799998887 44552221126899999985321
Q ss_pred --------ChhHhhhhhHHHHHHHHHHHHhh
Q 037566 78 --------SEEINISNNSTMFKNVMSVVVDS 100 (360)
Q Consensus 78 --------~~~~~~~vNv~gt~nll~a~~~~ 100 (360)
........|..-|..+|+.+.+.
T Consensus 282 ~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~ 312 (390)
T TIGR00521 282 TVFEGKIKKQGEELSLKLVKNPDIIAEVRKI 312 (390)
T ss_pred ccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence 00122346777778888877754
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.12 E-value=2 Score=38.79 Aligned_cols=111 Identities=10% Similarity=-0.001 Sum_probs=66.9
Q ss_pred chHHHHHHHhcCCCCCCCC--cEEEEEecCCCCC----------CC-CCCCceeeEeeccCChHHHHHHHccCCC---Cc
Q 037566 2 AGLSLAEALKNNPTIPGGP--WKVYGTARRPPPS----------WF-PSSHVDHYITFDALDSTDTTQKLSSISQ---EV 65 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~~----------~~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~---~v 65 (360)
||-+|+.+|++. ++ +. ..|....|.-+.. .+ ..-+++ ++..|++|-.++.+|.+++.. ..
T Consensus 15 lGl~i~~RLl~~--~D-e~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~-yvlvD~sNm~Sv~~A~~di~~rf~~l 90 (341)
T KOG1478|consen 15 LGLAICKRLLAE--DD-ENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVT-YVLVDVSNMQSVFRASKDIKQRFQRL 90 (341)
T ss_pred ccHHHHHHHHhc--cC-CceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEE-EEEEehhhHHHHHHHHHHHHHHhhhc
Confidence 688999999981 11 22 2244455653321 11 124688 999999998887777654311 25
Q ss_pred cEEEEeeeecCC------------------------------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccE
Q 037566 66 THLFWVMFQRLK------------------------------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRH 109 (360)
Q Consensus 66 ~~V~h~A~~~~~------------------------------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r 109 (360)
|.||--|++... +..+.++.||-|---+........+-+... .
T Consensus 91 d~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~~~-~ 169 (341)
T KOG1478|consen 91 DYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSDNP-Q 169 (341)
T ss_pred cEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcCCCC-e
Confidence 777766764210 223568999999877776654321102233 7
Q ss_pred EEEeccCc
Q 037566 110 VTLLMGTK 117 (360)
Q Consensus 110 ~v~~SS~~ 117 (360)
+|++||..
T Consensus 170 lvwtSS~~ 177 (341)
T KOG1478|consen 170 LVWTSSRM 177 (341)
T ss_pred EEEEeecc
Confidence 99998864
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=85.97 E-value=1.7 Score=37.52 Aligned_cols=62 Identities=13% Similarity=0.072 Sum_probs=35.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHcc-CCCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS-ISQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~-~~~~v~~V~h~A~~~ 75 (360)
.|..|++++.. +|++|+.+.....- . .+.+++ .+. +...+++.+++.. +. ..|.+||+|+++
T Consensus 31 ~G~~lA~~~~~------~Ga~V~li~g~~~~-~-~p~~~~-~i~--v~sa~em~~~~~~~~~-~~Di~I~aAAVs 93 (185)
T PF04127_consen 31 MGAALAEEAAR------RGAEVTLIHGPSSL-P-PPPGVK-VIR--VESAEEMLEAVKELLP-SADIIIMAAAVS 93 (185)
T ss_dssp HHHHHHHHHHH------TT-EEEEEE-TTS------TTEE-EEE---SSHHHHHHHHHHHGG-GGSEEEE-SB--
T ss_pred HHHHHHHHHHH------CCCEEEEEecCccc-c-ccccce-EEE--ecchhhhhhhhccccC-cceeEEEecchh
Confidence 38999999999 99999999876321 1 134566 554 4555554444332 11 148999999864
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=83.85 E-value=12 Score=33.85 Aligned_cols=86 Identities=8% Similarity=-0.086 Sum_probs=59.5
Q ss_pred hHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCChhHh
Q 037566 3 GLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSEEIN 82 (360)
Q Consensus 3 G~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~~~~ 82 (360)
|+.|++.|.+ .|++|++-+-..... +....+. ...|-+.|.+++.+.+++-+ ++.|+-....
T Consensus 14 gr~la~~L~~------~g~~v~~Svat~~g~-~~~~~~~-v~~G~l~~~~~l~~~l~~~~--i~~VIDATHP-------- 75 (248)
T PRK08057 14 ARALARALAA------AGVDIVLSLAGRTGG-PADLPGP-VRVGGFGGAEGLAAYLREEG--IDLVIDATHP-------- 75 (248)
T ss_pred HHHHHHHHHh------CCCeEEEEEccCCCC-cccCCce-EEECCCCCHHHHHHHHHHCC--CCEEEECCCc--------
Confidence 6889999988 899876655433221 2235667 77888889999999998664 6787664321
Q ss_pred hhhhHHHHHHHHHHHHhhccCCCCccEEEEe
Q 037566 83 ISNNSTMFKNVMSVVVDSNKGRSRLRHVTLL 113 (360)
Q Consensus 83 ~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~ 113 (360)
+..+ .++|+.++|.+. ++..+=|.
T Consensus 76 fA~~--is~~a~~ac~~~-----~ipyiR~e 99 (248)
T PRK08057 76 YAAQ--ISANAAAACRAL-----GIPYLRLE 99 (248)
T ss_pred cHHH--HHHHHHHHHHHh-----CCcEEEEe
Confidence 2233 368899999987 67666654
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=82.79 E-value=2.1 Score=41.36 Aligned_cols=64 Identities=16% Similarity=0.153 Sum_probs=43.5
Q ss_pred chHH--HHHHHhcCCCCCCCCcEEEEEecCC--CC-------------C--CC--CCCCceeeEeeccCChHHHHHHHcc
Q 037566 2 AGLS--LAEALKNNPTIPGGPWKVYGTARRP--PP-------------S--WF--PSSHVDHYITFDALDSTDTTQKLSS 60 (360)
Q Consensus 2 iG~~--lv~~Ll~~~~~~~~g~~V~~l~r~~--~~-------------~--~~--~~~~v~~~v~gDl~d~~~l~~~l~~ 60 (360)
||.+ ++++| + .|.+|+++++.. .. . .. ....+. .+.+|+++++++.++++.
T Consensus 53 IGlA~~IA~al-~------~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~-~i~~DVss~E~v~~lie~ 124 (398)
T PRK13656 53 YGLASRIAAAF-G------AGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAK-SINGDAFSDEIKQKVIEL 124 (398)
T ss_pred HhHHHHHHHHH-H------cCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHH
Confidence 4666 89999 8 899988888532 11 0 00 122356 789999999887776653
Q ss_pred C----CCCccEEEEeeee
Q 037566 61 I----SQEVTHLFWVMFQ 74 (360)
Q Consensus 61 ~----~~~v~~V~h~A~~ 74 (360)
+ . ++|.++|.++.
T Consensus 125 I~e~~G-~IDiLVnSaA~ 141 (398)
T PRK13656 125 IKQDLG-QVDLVVYSLAS 141 (398)
T ss_pred HHHhcC-CCCEEEECCcc
Confidence 2 2 38999999874
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=80.90 E-value=7.3 Score=34.79 Aligned_cols=67 Identities=12% Similarity=0.056 Sum_probs=43.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC-----CCCCCCCceeeEeeccCChHHHHHHHccCCC---CccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP-----SWFPSSHVDHYITFDALDSTDTTQKLSSISQ---EVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~-----~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~---~v~~V~h~A~ 73 (360)
|++.|++.|.+ +|.++...-..+.- ...+..+..+.++||++|.+++.+.++.+.. +.|-++|+-+
T Consensus 20 IAwGIAk~l~~------~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIa 93 (259)
T COG0623 20 IAWGIAKALAE------QGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIA 93 (259)
T ss_pred HHHHHHHHHHH------cCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEec
Confidence 68899999998 99997655543210 0101112232689999999988777653321 3789999865
Q ss_pred e
Q 037566 74 Q 74 (360)
Q Consensus 74 ~ 74 (360)
.
T Consensus 94 F 94 (259)
T COG0623 94 F 94 (259)
T ss_pred c
Confidence 4
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 360 | ||||
| 2v6f_A | 364 | Structure Of Progesterone 5beta-Reductase From Digi | 4e-68 |
| >pdb|2V6F|A Chain A, Structure Of Progesterone 5beta-Reductase From Digitalis Lanata Length = 364 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 360 | |||
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 1e-102 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 |
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 303 bits (778), Expect = e-102
Identities = 147/361 (40%), Positives = 213/361 (59%), Gaps = 13/361 (3%)
Query: 3 GLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSIS 62
G SLAE L T PGGPWKVYG ARR P+W + +++ + D D D+ KLS +
Sbjct: 14 GNSLAEILPLADT-PGGPWKVYGVARRTRPAWHEDNPINY-VQCDISDPDDSQAKLSPL- 70
Query: 63 QEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGP 122
+VTH+F+V + +E+ N NS MF+NV+ V+ + L+H++L G KHYMGP
Sbjct: 71 TDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCP---NLKHISLQTGRKHYMGP 127
Query: 123 VFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA---ASYSPAVTYSVHRSSIIIGA 179
G++ HDPP+ ED RL + NFYY +EDI +T+SVHR I G
Sbjct: 128 FESY---GKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGF 184
Query: 180 SSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRA 239
S S+ N + TL VYA IC+H+G R+ G K W+ + D SD+ ++AE IWAA A
Sbjct: 185 SPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYA 244
Query: 240 KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHG 299
KN+AFN +NGDVF WK WK+L+E F VE ++E ++MK K +W+EIV ++G
Sbjct: 245 KNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENG 304
Query: 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKII 359
L TK++++ + + +L + SMNKS+E GF GF ++ + +W+ K + KI+
Sbjct: 305 LTPTKLKDVGIWWFGDVILG-NECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIV 363
Query: 360 P 360
P
Sbjct: 364 P 364
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 5e-04
Identities = 49/348 (14%), Positives = 92/348 (26%), Gaps = 110/348 (31%)
Query: 6 LAEALKNNPTIPGGPWKVYGTARRPP---PSWFPSSHVDHYITFDALDSTDTTQKLSSIS 62
L +K P ++Y R F +V + L Q L
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL-----RQAL---- 144
Query: 63 QEVTHLFWVMFQRLKSEEINISNNSTMF---KNVMSVVVDSNKGRSRLRHVTLLMGTK-H 118
L+ + N+ + + K +++ V + V M K
Sbjct: 145 -----------LELRPAK-NVLIDG-VLGSGKTWVALDVCLSYK------VQCKMDFKIF 185
Query: 119 YMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVE---DIAASYSPAVTYSVH---- 171
++ + + +++ Y ++ + +S + +H
Sbjct: 186 WLN-----------LKNC--NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 172 RSSIIIGASSRSLNNSLLTLA-VYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQ 230
++ S+ N LL L V N W F ++S ++L
Sbjct: 233 ELRRLL--KSKPYENCLLVLLNVQ---------------NAKAWNAF-NLS-CKIL---- 269
Query: 231 IWAATTDRAKNQAFNCTNG-----------DVFTWKSLWKLLSEIFDVEFVPFDEKEKFD 279
TT R K + T + LL + D P D +
Sbjct: 270 ---LTT-RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR--PQDLPREVL 323
Query: 280 AV---------EMMKEKGEIWDEIVEKHGLYKTKMEEI--TCFEALNT 316
E +++ WD KH K+ I + L
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNW--KHVNCD-KLTTIIESSLNVLEP 368
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.97 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.97 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.96 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.96 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.96 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.96 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.96 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.96 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.95 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.93 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.93 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.92 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.91 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.91 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.91 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.91 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.91 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.91 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.91 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.9 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.9 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.88 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.87 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.87 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.87 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.86 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.84 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.83 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.83 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.83 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.8 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.76 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.75 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.75 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.72 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.69 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.68 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.68 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.68 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.68 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.67 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.66 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.64 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.64 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.63 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.62 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.62 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.61 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.61 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.61 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.6 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.59 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.59 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.59 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.58 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.58 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.58 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.58 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.57 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.57 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.57 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.57 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.57 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.56 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.56 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.55 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.55 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.55 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.55 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.55 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.55 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.54 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.54 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.54 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.54 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.54 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.54 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.54 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.54 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.54 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.54 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.54 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.53 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.53 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.53 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.53 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.53 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.53 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.53 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.53 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.52 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.52 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.52 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.52 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.52 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.52 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.51 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.51 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.51 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.51 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.51 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.51 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.51 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.51 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.51 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.51 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.5 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.5 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.5 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.5 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.5 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.5 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.5 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.49 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.49 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.49 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.49 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.49 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.49 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.49 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.49 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.49 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.48 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.48 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.48 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.48 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.48 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.48 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.47 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.47 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.47 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.47 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.47 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.47 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.47 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.46 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.46 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.46 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.46 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.46 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.46 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.46 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.45 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.45 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.45 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.45 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.45 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.45 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.44 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.44 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.44 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.44 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.44 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.44 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.43 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.43 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.43 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.43 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.42 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.42 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.42 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.42 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.42 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.42 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.42 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.42 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.41 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.41 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.41 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.4 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.4 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.4 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.4 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.39 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.39 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.39 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.39 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.39 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.38 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.38 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.38 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.38 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.38 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.37 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.37 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.36 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.36 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.36 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.35 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.35 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.35 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.34 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.34 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.33 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.33 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.33 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.33 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.32 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.31 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.3 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.3 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.3 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.29 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.28 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.28 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.27 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.27 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.26 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.26 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.25 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.25 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.24 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.24 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.24 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.24 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.22 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.21 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.21 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.2 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.2 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.16 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.16 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.15 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.15 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.15 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.14 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.13 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.11 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.1 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.08 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.06 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.03 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.03 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.98 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.96 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.95 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.93 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.93 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.9 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.9 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.9 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.89 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.88 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.8 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.64 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.5 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.5 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.38 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.33 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.09 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.01 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.0 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 97.91 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.77 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.63 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 97.49 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.41 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 97.4 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 97.35 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 97.33 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 97.29 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.08 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.07 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 96.66 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 96.62 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 95.76 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 95.66 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 95.13 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 94.76 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 94.5 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 94.4 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 94.32 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 94.3 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 93.83 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 93.53 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 92.96 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 92.83 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 91.85 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 91.71 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 91.21 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 90.79 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 90.63 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 87.98 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 87.32 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 84.93 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 82.87 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 81.97 |
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-46 Score=354.47 Aligned_cols=337 Identities=40% Similarity=0.734 Sum_probs=264.6
Q ss_pred CchHHHHHHHhcCCCCCCCC-----cEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec
Q 037566 1 MAGLSLAEALKNNPTIPGGP-----WKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g-----~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~ 75 (360)
+||++|+++|++ +| ++|++++|++........+++ ++.+|++|++++.++++++.. +|+|||+|+..
T Consensus 12 ~iG~~l~~~L~~------~g~~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~-~d~vih~a~~~ 83 (364)
T 2v6g_A 12 IIGNSLAEILPL------ADTPGGPWKVYGVARRTRPAWHEDNPIN-YVQCDISDPDDSQAKLSPLTD-VTHVFYVTWAN 83 (364)
T ss_dssp HHHHHHHHHTTS------TTCTTCSEEEEEEESSCCCSCCCSSCCE-EEECCTTSHHHHHHHHTTCTT-CCEEEECCCCC
T ss_pred HHHHHHHHHHHh------CCCCCCceEEEEEeCCCCccccccCceE-EEEeecCCHHHHHHHHhcCCC-CCEEEECCCCC
Confidence 589999999998 89 999999998654322345789 999999999999999998642 68999999976
Q ss_pred CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEE-------EeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 76 LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVT-------LLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 76 ~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v-------~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
..++.+++++|+.||.|++++|.+. +++++||| |+||.++||... ....|++|++|..|.
T Consensus 84 ~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~~g~~i~~Ss~~vyg~~~----------~~~~~~~E~~~~~~~ 150 (364)
T 2v6g_A 84 RSTEQENCEANSKMFRNVLDAVIPN---CPNLKHISLQTGRKHYMGPFESYGKIE----------SHDPPYTEDLPRLKY 150 (364)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHTTT---CTTCCEEEEECCTHHHHCCGGGTTTSC----------CCCSSBCTTSCCCSS
T ss_pred cchHHHHHHHhHHHHHHHHHHHHHh---ccccceEEeccCceEEEechhhccccc----------cCCCCCCccccCCcc
Confidence 6678889999999999999999875 34799998 799999998531 024578999887654
Q ss_pred CCCcHHHHHHHHh--cCCC-CcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHH
Q 037566 149 PNFYYAVEDIAAS--YSPA-VTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRV 225 (360)
Q Consensus 149 p~~~Y~~ek~l~e--~~~~-~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~d 225 (360)
+..||..|+++.+ ...+ ++++++||++||||++.+..+...+..++..+.+..+.++.++|++.++....+++|++|
T Consensus 151 ~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~D 230 (364)
T 2v6g_A 151 MNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADL 230 (364)
T ss_dssp CCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHH
T ss_pred chhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHH
Confidence 5667888888877 3455 999999999999998765444433333444443224667777888866656778999999
Q ss_pred HHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCc
Q 037566 226 LAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKM 305 (360)
Q Consensus 226 la~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 305 (360)
+|++++.++.++...|++||+++++++|++|+++.+++.+|.+....+...|.++..+++...+.|..+.++.++.+..+
T Consensus 231 va~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (364)
T 2v6g_A 231 IAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKL 310 (364)
T ss_dssp HHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCH
T ss_pred HHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCcccc
Confidence 99999999887655689999999999999999999999999876532013678888887777778888887777654433
Q ss_pred ccccccchhhhhhccccc-cccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCCC
Q 037566 306 EEITCFEALNTVLHLQFQ-HVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360 (360)
Q Consensus 306 ~~~~~~~~~d~~~~~~~~-~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~ip 360 (360)
.++..|.+.+..+. .+ ..+|++|++++||+|.++++|+|+++++||+++|+||
T Consensus 311 ~~~~~~~~~~~~~~--~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp 364 (364)
T 2v6g_A 311 KDVGIWWFGDVILG--NECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP 364 (364)
T ss_dssp HHHCCHHHHHHHHT--SCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred ccccccchhhhccc--cchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 33323444444332 35 5899999988999999999999999999999999998
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-40 Score=310.08 Aligned_cols=285 Identities=16% Similarity=0.104 Sum_probs=219.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----CCC-------CCceeeEeeccCChHHHHHHHccCCCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----FPS-------SHVDHYITFDALDSTDTTQKLSSISQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~~~-------~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V 68 (360)
+||++|+++|++ +|++|++++|++.... ... .+++ ++.+|++|++++.+++++ +|+|
T Consensus 36 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~V 104 (351)
T 3ruf_A 36 FIGSNLLEKLLK------LNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFC-FIEGDIRDLTTCEQVMKG----VDHV 104 (351)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEE-EEECCTTCHHHHHHHTTT----CSEE
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCCCCchhhhhhhhhccccccCCceE-EEEccCCCHHHHHHHhcC----CCEE
Confidence 589999999999 8999999999765321 000 5789 999999999999999986 5899
Q ss_pred EEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 69 FWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 69 ~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
||+|+... .++..++++|+.||.||+++|.+. +++||||+||+++||.. ...|++|++
T Consensus 105 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~E~~ 167 (351)
T 3ruf_A 105 LHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-----QVQSFTYAASSSTYGDH------------PALPKVEEN 167 (351)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTC------------CCSSBCTTC
T ss_pred EECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEecHHhcCCC------------CCCCCccCC
Confidence 99998532 256678999999999999999987 79999999999999853 346889999
Q ss_pred CCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc--chhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 144 LRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL--NNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+.. |.+.|+.+|..+| ...+++++++||++||||+.... ........+. .+ ..+.++.++|++.
T Consensus 168 ~~~--p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~g~g~-- 240 (351)
T 3ruf_A 168 IGN--PLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTA-AM--LKGDDVYINGDGE-- 240 (351)
T ss_dssp CCC--CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHH-HH--HHTCCCEEESSSC--
T ss_pred CCC--CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHH-HH--HcCCCcEEeCCCC--
Confidence 864 5778999998877 23589999999999999986422 1111111111 12 1356777778876
Q ss_pred cccccccCHHHHHHHHHHHHcC-CCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHH
Q 037566 215 EHFCDMSDSRVLAEQQIWAATT-DRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDE 293 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~-~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (360)
..++++|++|+|++++.++.. +...|++|||++|+++|++|+++.+++.+|.+.... +.+. .
T Consensus 241 -~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~----~~~~----~-------- 303 (351)
T 3ruf_A 241 -TSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHID----KLSI----K-------- 303 (351)
T ss_dssp -CEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-------------E--------
T ss_pred -eEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccc----cccc----c--------
Confidence 567999999999999998876 345689999999999999999999999999843321 0000 0
Q ss_pred HHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 294 IVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 294 ~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
+ ..... .......+|++|+++ |||+|+++++|+|+++++||+++
T Consensus 304 ----~----~~~~~-----------~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 348 (351)
T 3ruf_A 304 ----Y----REFRS-----------GDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF 348 (351)
T ss_dssp ----E----ECCCT-----------TCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ----c----cCCCC-----------CccceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 0 00000 001256899999987 89999999999999999999864
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-39 Score=299.51 Aligned_cols=278 Identities=14% Similarity=0.175 Sum_probs=215.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC-Ch
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK-SE 79 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~-~~ 79 (360)
+||++|+++|++ +|++|++++|++.... -.+++ ++.+|++ ++++.+++++ +|+|||+|+.... ++
T Consensus 13 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~--~~~~~-~~~~Dl~-~~~~~~~~~~----~d~Vih~a~~~~~~~~ 78 (311)
T 3m2p_A 13 FLGQYVVESIKN------DGNTPIILTRSIGNKA--INDYE-YRVSDYT-LEDLINQLND----VDAVVHLAATRGSQGK 78 (311)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESCCC-------CCE-EEECCCC-HHHHHHHTTT----CSEEEECCCCCCSSSC
T ss_pred HHHHHHHHHHHh------CCCEEEEEeCCCCccc--CCceE-EEEcccc-HHHHHHhhcC----CCEEEEccccCCCCCh
Confidence 589999999999 8999999999843222 23789 9999999 9999999986 5899999985433 67
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA 159 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l 159 (360)
...+++|+.||.|++++|.+. +++||||+||.++||.. ...|++|+++.. |.+.|+.+|..
T Consensus 79 ~~~~~~n~~~~~~ll~a~~~~-----~~~r~v~~SS~~vyg~~------------~~~~~~E~~~~~--p~~~Y~~sK~~ 139 (311)
T 3m2p_A 79 ISEFHDNEILTQNLYDACYEN-----NISNIVYASTISAYSDE------------TSLPWNEKELPL--PDLMYGVSKLA 139 (311)
T ss_dssp GGGTHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGCCCG------------GGCSBCTTSCCC--CSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEccHHHhCCC------------CCCCCCCCCCCC--CCchhHHHHHH
Confidence 788999999999999999987 79999999999999853 246789999865 47789999988
Q ss_pred Hh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHH
Q 037566 160 AS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIW 232 (360)
Q Consensus 160 ~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~ 232 (360)
+| ...+++++++||++||||+.... ..... +...+ ..+.++.++|++. ..+++++++|+|++++.
T Consensus 140 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~--~~~~~--~~~~~~~~~g~~~---~~~~~v~v~Dva~a~~~ 211 (311)
T 3m2p_A 140 CEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMINR--FFRQA--FHGEQLTLHANSV---AKREFLYAKDAAKSVIY 211 (311)
T ss_dssp HHHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHHHH--HHHHH--HTCCCEEESSBCC---CCEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHHHH--HHHHH--HcCCCeEEecCCC---eEEceEEHHHHHHHHHH
Confidence 77 23699999999999999986421 11111 11112 2467777778776 56799999999999999
Q ss_pred HHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccc
Q 037566 233 AATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFE 312 (360)
Q Consensus 233 a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 312 (360)
++..+. .+++|||++|+++|++|+++.+++.+|.+.... ..+.+ .. .
T Consensus 212 ~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~-----------------------~~-~------ 258 (311)
T 3m2p_A 212 ALKQEK-VSGTFNIGSGDALTNYEVANTINNAFGNKDNLL--VKNPN-----------------------AN-E------ 258 (311)
T ss_dssp HTTCTT-CCEEEEECCSCEECHHHHHHHHHHHTTCTTCEE--ECSSS-----------------------BC-C------
T ss_pred HHhcCC-CCCeEEeCCCCcccHHHHHHHHHHHhCCCCcce--ecCCC-----------------------CC-C------
Confidence 887654 789999999999999999999999999865421 00100 00 0
Q ss_pred hhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCCCC
Q 037566 313 ALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 313 ~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g~i 359 (360)
......+|++|+++ |||+|.++++|+|+++++||++.+-.
T Consensus 259 -------~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 299 (311)
T 3m2p_A 259 -------GIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDV 299 (311)
T ss_dssp -------SCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC----
T ss_pred -------CcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcccC
Confidence 01256899999987 89999999999999999999887644
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-39 Score=303.56 Aligned_cols=281 Identities=10% Similarity=0.031 Sum_probs=217.4
Q ss_pred CchHHHHHHHhcCCCCCCCC--cEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGP--WKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ +| ++|++++|..... ....++++ ++.+|++|++++.+++++.+ +|+|||+
T Consensus 35 ~iG~~l~~~L~~------~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~Vih~ 105 (346)
T 4egb_A 35 FIGSNFVHYMLQ------SYETYKIINFDALTYSGNLNNVKSIQDHPNYY-FVKGEIQNGELLEHVIKERD--VQVIVNF 105 (346)
T ss_dssp HHHHHHHHHHHH------HCTTEEEEEEECCCTTCCGGGGTTTTTCTTEE-EEECCTTCHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHHh------hCCCcEEEEEeccccccchhhhhhhccCCCeE-EEEcCCCCHHHHHHHHhhcC--CCEEEEC
Confidence 589999999999 78 8899998865321 11236899 99999999999999999854 6899999
Q ss_pred eeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 72 MFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 72 A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
|+... .++..++++|+.||.+|+++|.+. +++||||+||.+|||... ...+++|++|..
T Consensus 106 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS~~vy~~~~-----------~~~~~~E~~~~~ 169 (346)
T 4egb_A 106 AAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-----PHIKLVQVSTDEVYGSLG-----------KTGRFTEETPLA 169 (346)
T ss_dssp CCCC---------CHHHHHHTHHHHHHHHHHHHS-----TTSEEEEEEEGGGGCCCC-----------SSCCBCTTSCCC
T ss_pred CcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCchHHhCCCC-----------cCCCcCCCCCCC
Confidence 98532 356678999999999999999986 789999999999998531 246789999865
Q ss_pred CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 147 PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
|.+.|+.+|..+| ...+++++++||++||||+.... ... ...+ ..+ ..+.++.+.|++. ..++
T Consensus 170 --p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~-~~~~-~~~--~~~~~~~~~~~~~---~~~~ 239 (346)
T 4egb_A 170 --PNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLI-PLMV-TNA--LEGKKLPLYGDGL---NVRD 239 (346)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHH-HHHH-HHH--HTTCCCEEETTSC---CEEC
T ss_pred --CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chH-HHHH-HHH--HcCCCceeeCCCC---eEEe
Confidence 5778999998877 23589999999999999986421 111 1111 111 2466777778876 5679
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhC
Q 037566 220 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHG 299 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
+++++|+|++++.++..+. .|++|||++++++|+.|+++.+++.+|.+.+.+. ..+
T Consensus 240 ~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~---~~~-------------------- 295 (346)
T 4egb_A 240 WLHVTDHCSAIDVVLHKGR-VGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIE---YVT-------------------- 295 (346)
T ss_dssp EEEHHHHHHHHHHHHHHCC-TTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCE---EEC--------------------
T ss_pred eEEHHHHHHHHHHHHhcCC-CCCEEEECCCCceeHHHHHHHHHHHhCCCccccc---ccC--------------------
Confidence 9999999999999887654 7899999999999999999999999998654220 000
Q ss_pred CCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 300 l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
... .. .....+|++|+++ |||+|.++++|+|+++++||+++
T Consensus 296 --~~~-~~-------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (346)
T 4egb_A 296 --DRL-GH-------------DRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKN 337 (346)
T ss_dssp --C---CC-------------CSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred --CCC-CC-------------cceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence 000 00 1245789999986 89999999999999999999886
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=295.97 Aligned_cols=278 Identities=13% Similarity=0.126 Sum_probs=210.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR---- 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~---- 75 (360)
+||++|+++|++ +| .|++++++.... .....+++ ++.+|++| +++.+++++ +|+|||+|+..
T Consensus 12 ~iG~~l~~~L~~------~g-~~v~~~~~~~~~~~~~~~~~~-~~~~Dl~~-~~~~~~~~~----~d~vih~a~~~~~~~ 78 (313)
T 3ehe_A 12 FIGSHVVDKLSE------SN-EIVVIDNLSSGNEEFVNEAAR-LVKADLAA-DDIKDYLKG----AEEVWHIAANPDVRI 78 (313)
T ss_dssp HHHHHHHHHHTT------TS-CEEEECCCSSCCGGGSCTTEE-EECCCTTT-SCCHHHHTT----CSEEEECCCCCCCC-
T ss_pred hHHHHHHHHHHh------CC-CEEEEEcCCCCChhhcCCCcE-EEECcCCh-HHHHHHhcC----CCEEEECCCCCChhh
Confidence 589999999998 88 555666554321 12246789 99999999 889999986 58999999842
Q ss_pred -CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHH
Q 037566 76 -LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYA 154 (360)
Q Consensus 76 -~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~ 154 (360)
..++...+++|+.||.+++++|.+. +++||||+||+++||.. ...|++|+.|.. |.+.|+
T Consensus 79 ~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~iv~~SS~~vyg~~------------~~~~~~E~~~~~--~~~~Y~ 139 (313)
T 3ehe_A 79 GAENPDEIYRNNVLATYRLLEAMRKA-----GVSRIVFTSTSTVYGEA------------KVIPTPEDYPTH--PISLYG 139 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGGCSC------------SSSSBCTTSCCC--CCSHHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeCchHHhCcC------------CCCCCCCCCCCC--CCCHHH
Confidence 2367788999999999999999987 78999999999999853 346789998764 477899
Q ss_pred HHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHH
Q 037566 155 VEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLA 227 (360)
Q Consensus 155 ~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla 227 (360)
.+|...| ...+++++++||++||||++... ... . +...+. ..+.++.+.|++. ..++++|++|+|
T Consensus 140 ~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~-~-~~~~~~-~~~~~~~~~~~g~---~~~~~i~v~Dva 211 (313)
T 3ehe_A 140 ASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHG--VIY-D-FIMKLK-RNPEELEILGNGE---QNKSYIYISDCV 211 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCS--HHH-H-HHHHHH-HCTTEEEESTTSC---CEECCEEHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcC--hHH-H-HHHHHH-cCCCceEEeCCCC---eEEeEEEHHHHH
Confidence 9998877 24589999999999999986531 111 1 111111 1334566778876 567999999999
Q ss_pred HHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCccc
Q 037566 228 EQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEE 307 (360)
Q Consensus 228 ~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 307 (360)
+++++++. +...+++|||++|+++|++|+++.+++.+|.+.... .... ...| ...
T Consensus 212 ~a~~~~~~-~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-----~~~~------~~~~----------~~~--- 266 (313)
T 3ehe_A 212 DAMLFGLR-GDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFR-----FTGG------DRGW----------KGD--- 266 (313)
T ss_dssp HHHHHHTT-CCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEE-----EC----------------------------
T ss_pred HHHHHHhc-cCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceE-----ECCC------ccCC----------ccc---
Confidence 99998886 455689999999999999999999999999864311 0000 0000 000
Q ss_pred ccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHC
Q 037566 308 ITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 308 ~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.....+|++|+++|||+|.++++|+|+++++||+++
T Consensus 267 -------------~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~ 302 (313)
T 3ehe_A 267 -------------VPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVED 302 (313)
T ss_dssp ----------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHHH
T ss_pred -------------cceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHhC
Confidence 013578999998899999999999999999999874
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-39 Score=298.29 Aligned_cols=284 Identities=13% Similarity=0.068 Sum_probs=213.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR---- 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~---- 75 (360)
+||++|+++|++ +|++|++++|.+... .....+++ ++.+|++|.+ +.+++++ |+|||+|+..
T Consensus 11 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~-~~~~Dl~d~~-~~~~~~~-----d~vih~A~~~~~~~ 77 (312)
T 3ko8_A 11 FIGSHLVDKLVE------LGYEVVVVDNLSSGRREFVNPSAE-LHVRDLKDYS-WGAGIKG-----DVVFHFAANPEVRL 77 (312)
T ss_dssp HHHHHHHHHHHH------TTCEEEEECCCSSCCGGGSCTTSE-EECCCTTSTT-TTTTCCC-----SEEEECCSSCSSSG
T ss_pred hHHHHHHHHHHh------CCCEEEEEeCCCCCchhhcCCCce-EEECccccHH-HHhhcCC-----CEEEECCCCCCchh
Confidence 589999999999 899999999976542 11246789 9999999998 7777665 6899999842
Q ss_pred -CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHH
Q 037566 76 -LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYA 154 (360)
Q Consensus 76 -~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~ 154 (360)
..++...+++|+.||.|++++|++. +++||||+||.++||.. ...|++|+.+.. |.+.|+
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~vyg~~------------~~~~~~e~~~~~--p~~~Y~ 138 (312)
T 3ko8_A 78 STTEPIVHFNENVVATFNVLEWARQT-----GVRTVVFASSSTVYGDA------------DVIPTPEEEPYK--PISVYG 138 (312)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSC------------SSSSBCTTSCCC--CCSHHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeCcHHHhCCC------------CCCCCCCCCCCC--CCChHH
Confidence 2356778899999999999999987 78999999999999853 346789998764 477899
Q ss_pred HHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHH
Q 037566 155 VEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLA 227 (360)
Q Consensus 155 ~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla 227 (360)
.+|...| ...+++++++||++||||+.... .... +...+. ..+.++...|++. ..++++|++|+|
T Consensus 139 ~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~--~~~~--~~~~~~-~~~~~~~~~~~g~---~~~~~i~v~Dva 210 (312)
T 3ko8_A 139 AAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHG--VIYD--FIMKLR-RNPNVLEVLGDGT---QRKSYLYVRDAV 210 (312)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSS--HHHH--HHHHHH-HCTTEEEEC-------CEECEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCC--hHHH--HHHHHH-hCCCCeEEcCCCC---eEEeeEEHHHHH
Confidence 9998877 23489999999999999986431 1111 111121 1234566677776 567999999999
Q ss_pred HHHHHHHcC---CCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccC
Q 037566 228 EQQIWAATT---DRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTK 304 (360)
Q Consensus 228 ~a~~~a~~~---~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 304 (360)
++++.++.. +...+++|||++|+++|+.|+++.+++.+|.+.... ..|... . . .+. +..
T Consensus 211 ~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~----~-------~----~~~-~~~ 272 (312)
T 3ko8_A 211 EATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIR--LVPSTP----D-------G----RGW-PGD 272 (312)
T ss_dssp HHHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEE--EC--------------------------CC
T ss_pred HHHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCcee--ecCccc----c-------c----cCC-CCC
Confidence 999999876 455689999999999999999999999999865421 011100 0 0 000 000
Q ss_pred cccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCCC
Q 037566 305 MEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMKI 358 (360)
Q Consensus 305 ~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g~ 358 (360)
.....+|++|+++ |||+|+++++|+|+++++||+++||
T Consensus 273 ----------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 311 (312)
T 3ko8_A 273 ----------------VKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKELW 311 (312)
T ss_dssp ----------------CSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred ----------------ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhc
Confidence 1246889999965 8999999999999999999999887
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=304.24 Aligned_cols=296 Identities=13% Similarity=0.109 Sum_probs=216.8
Q ss_pred CchHHHHHHHhcCCCCCCC-CcEEEEEecCCCCCC--CCCCCceeeEeeccC-ChHHHHHHHccCCCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGG-PWKVYGTARRPPPSW--FPSSHVDHYITFDAL-DSTDTTQKLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~~~--~~~~~v~~~v~gDl~-d~~~l~~~l~~~~~~v~~V~h~A~~~~ 76 (360)
+||++|+++|++ + |++|++++|++.... ....+++ ++.+|++ |.+++.+++++ +|+|||+|+...
T Consensus 35 ~iG~~l~~~L~~------~~g~~V~~~~r~~~~~~~~~~~~~v~-~~~~Dl~~d~~~~~~~~~~----~d~Vih~A~~~~ 103 (372)
T 3slg_A 35 FIGHHLSKRILE------TTDWEVFGMDMQTDRLGDLVKHERMH-FFEGDITINKEWVEYHVKK----CDVILPLVAIAT 103 (372)
T ss_dssp HHHHHHHHHHHH------HSSCEEEEEESCCTTTGGGGGSTTEE-EEECCTTTCHHHHHHHHHH----CSEEEECBCCCC
T ss_pred hHHHHHHHHHHh------CCCCEEEEEeCChhhhhhhccCCCeE-EEeCccCCCHHHHHHHhcc----CCEEEEcCcccc
Confidence 589999999998 7 999999999865421 1236899 9999999 99999999997 589999998543
Q ss_pred -----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC---C-
Q 037566 77 -----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL---P- 147 (360)
Q Consensus 77 -----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~---p- 147 (360)
.++.+++++|+.||.||+++|++. + +||||+||.+|||.. ...+++|+++.. |
T Consensus 104 ~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~-~~~v~~SS~~vyg~~------------~~~~~~e~~~~~~~~p~ 165 (372)
T 3slg_A 104 PATYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFPSTSEVYGMC------------ADEQFDPDASALTYGPI 165 (372)
T ss_dssp HHHHHHCHHHHHHHHTTTTHHHHHHHHHH-----T-CEEEEECCGGGGBSC------------CCSSBCTTTCCEEECCT
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEeCcHHHhCCC------------CCCCCCccccccccCCC
Confidence 256778899999999999999987 6 899999999999863 245677777431 1
Q ss_pred -CCCCcHHHHHHHHh------cCCCCcEEEEcCCCeeecCCCCc------chhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 148 -FPNFYYAVEDIAAS------YSPAVTYSVHRSSIIIGASSRSL------NNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 148 -~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
.|.+.|+.+|..+| ...+++++++||++||||++... ........+. .+ ..+.++.++|++.
T Consensus 166 ~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~g~-- 240 (372)
T 3slg_A 166 NKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLG-HI--VRGENISLVDGGS-- 240 (372)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHH-HH--HHTCCEEEGGGGC--
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHH-HH--HcCCCcEEeCCCc--
Confidence 35668999998887 12299999999999999986431 1111111111 12 1466777778775
Q ss_pred cccccccCHHHHHHHHHHHHcCCC--CCCCceeccC-CCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHH
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTN-GDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIW 291 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~-g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (360)
..+++++++|+|++++.++..+. ..|++|||++ ++++|++|+++.+++.+|.+.... ....
T Consensus 241 -~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~----------~~~~----- 304 (372)
T 3slg_A 241 -QKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYA----------DSAK----- 304 (372)
T ss_dssp -CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTH----------HHHH-----
T ss_pred -eEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccc----------cccc-----
Confidence 56899999999999999988764 5689999999 589999999999999999754321 0000
Q ss_pred HHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 292 DEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
+..+.+..... +............+|++|+++ |||+|+++++|+|+++++||+++
T Consensus 305 -----~~~~~~~~~~~-----~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 360 (372)
T 3slg_A 305 -----RVKLVETTSGA-----YYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH 360 (372)
T ss_dssp -----TCCEEEC------------------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred -----cceeeeccccc-----cccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 00000000000 000000001256889999987 79999999999999999999764
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=297.12 Aligned_cols=284 Identities=13% Similarity=0.069 Sum_probs=216.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCC--------CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWF--------PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~--------~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+||++|+++|++ +|++|++++|++..... ...+++ ++.+|++|++++.++++..+ +|+|||+|
T Consensus 16 ~iG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~vih~A 86 (341)
T 3enk_A 16 YIGSHTAVELLA------HGYDVVIADNLVNSKREAIARIEKITGKTPA-FHETDVSDERALARIFDAHP--ITAAIHFA 86 (341)
T ss_dssp HHHHHHHHHHHH------TTCEEEEECCCSSSCTHHHHHHHHHHSCCCE-EECCCTTCHHHHHHHHHHSC--CCEEEECC
T ss_pred HHHHHHHHHHHH------CCCcEEEEecCCcchHHHHHHHHhhcCCCce-EEEeecCCHHHHHHHHhccC--CcEEEECc
Confidence 489999999999 89999999997654210 134788 99999999999999998543 79999999
Q ss_pred eecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 73 FQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 73 ~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
+... .++.+.+++|+.||.+++++|++. ++++||++||.++||.. ...|++|+.+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~g~~------------~~~~~~e~~~~~- 148 (341)
T 3enk_A 87 ALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-----AVKRIVFSSSATVYGVP------------ERSPIDETFPLS- 148 (341)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGBCSC------------SSSSBCTTSCCB-
T ss_pred cccccCccccChHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEEecceEecCC------------CCCCCCCCCCCC-
Confidence 8532 255678899999999999999886 68999999999999853 346789998864
Q ss_pred CCCCcHHHHHHHHh--------cCCCCcEEEEcCCCeeecCCCCc--------chhHHHHHHHHHHHhhcCCCeeeeC--
Q 037566 148 FPNFYYAVEDIAAS--------YSPAVTYSVHRSSIIIGASSRSL--------NNSLLTLAVYATICRHQGLPFRYLG-- 209 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e--------~~~~~~~~ilRp~~vyGp~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~G-- 209 (360)
|.+.|+.+|...| ...+++++++||++||||++... .+...+. +.. .......++.+.|
T Consensus 149 -~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~g~~ 225 (341)
T 3enk_A 149 -ATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPY-VAQ-VAVGKLEKLRVFGSD 225 (341)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHH-HHH-HHHTSSSCEEEECSC
T ss_pred -CCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHH-HHH-HHhcCCCceEEeCCc
Confidence 4778999998877 22359999999999999965210 1222211 111 1122235566666
Q ss_pred ----CcccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHH
Q 037566 210 ----NKYTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEM 283 (360)
Q Consensus 210 ----~~~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~ 283 (360)
++. ..+|++|++|+|++++.++.. +...|++|||++|+++|++|+++.+++.+|.+.+.. ..+.
T Consensus 226 ~~~~~g~---~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~----- 295 (341)
T 3enk_A 226 YPTPDGT---GVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYE--LVAR----- 295 (341)
T ss_dssp SSSTTSS---CEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEE--EECC-----
T ss_pred cCCCCCC---eeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCccee--eCCC-----
Confidence 444 568999999999999988865 235689999999999999999999999999765421 0000
Q ss_pred HHHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCC
Q 037566 284 MKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMK 357 (360)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g 357 (360)
.. .. .....+|++|+++ |||+|+++++|+|+++++||+++.
T Consensus 296 -------------------~~-~~-------------~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~ 337 (341)
T 3enk_A 296 -------------------RP-GD-------------VAECYANPAAAAETIGWKAERDLERMCADHWRWQENNP 337 (341)
T ss_dssp -------------------CT-TC-------------CSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHST
T ss_pred -------------------CC-CC-------------ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcC
Confidence 00 00 1146789999976 899999999999999999999864
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-38 Score=295.92 Aligned_cols=302 Identities=11% Similarity=0.109 Sum_probs=210.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL--- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~--- 76 (360)
+||++|+++|++ +|++|++++|++.... +...+++ ++.+|++|++++.+++++ +|+|||+|+...
T Consensus 24 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~l~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~vih~a~~~~~~~ 92 (342)
T 2x4g_A 24 LLGHHAARAIRA------AGHDLVLIHRPSSQIQRLAYLEPE-CRVAEMLDHAGLERALRG----LDGVIFSAGYYPSRP 92 (342)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECTTSCGGGGGGGCCE-EEECCTTCHHHHHHHTTT----CSEEEEC--------
T ss_pred HHHHHHHHHHHH------CCCEEEEEecChHhhhhhccCCeE-EEEecCCCHHHHHHHHcC----CCEEEECCccCcCCC
Confidence 589999999999 8999999999865421 1123788 999999999999999987 589999998532
Q ss_pred CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC--CCcHH
Q 037566 77 KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP--NFYYA 154 (360)
Q Consensus 77 ~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p--~~~Y~ 154 (360)
.++.+++++|+.||.|++++|.+. +++||||+||.++||... + ...+ +|++|..|.. .+.|+
T Consensus 93 ~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~------~----~~~~-~E~~~~~p~~~~~~~Y~ 156 (342)
T 2x4g_A 93 RRWQEEVASALGQTNPFYAACLQA-----RVPRILYVGSAYAMPRHP------Q----GLPG-HEGLFYDSLPSGKSSYV 156 (342)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHH-----TCSCEEEECCGGGSCCCT------T----SSCB-CTTCCCSSCCTTSCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCHHhhCcCC------C----CCCC-CCCCCCCccccccChHH
Confidence 356678899999999999999987 789999999999998531 0 1134 8988865421 66799
Q ss_pred HHHHHHh-------cCCCCcEEEEcCCCeeecCC-CCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHH
Q 037566 155 VEDIAAS-------YSPAVTYSVHRSSIIIGASS-RSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVL 226 (360)
Q Consensus 155 ~ek~l~e-------~~~~~~~~ilRp~~vyGp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dl 226 (360)
.+|...| .. +++++++||++||||+. ...... +...+. .+.++.+ |+ ...++++++|+
T Consensus 157 ~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~~~-----~~~~~~--~~~~~~~-~~-----~~~~~i~v~Dv 222 (342)
T 2x4g_A 157 LCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTTGR-----VITAIG--NGEMTHY-VA-----GQRNVIDAAEA 222 (342)
T ss_dssp HHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCSTTH-----HHHHHH--TTCCCEE-EC-----CEEEEEEHHHH
T ss_pred HHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccccHHH-----HHHHHH--cCCCccc-cC-----CCcceeeHHHH
Confidence 9998877 24 89999999999999976 211211 111121 3444444 43 45789999999
Q ss_pred HHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcc
Q 037566 227 AEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKME 306 (360)
Q Consensus 227 a~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 306 (360)
|++++.++..+.. |++|||++++ +|++|+++.+++.+|.+.+. ..|.+....+....+.+..+.++ ++.+.
T Consensus 223 a~~~~~~~~~~~~-g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~---~~p~~~~~~~~~~~~~~~~~~~~----~~~~~ 293 (342)
T 2x4g_A 223 GRGLLMALERGRI-GERYLLTGHN-LEMADLTRRIAELLGQPAPQ---PMSMAMARALATLGRLRYRVSGQ----LPLLD 293 (342)
T ss_dssp HHHHHHHHHHSCT-TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE---EECHHHHHHHHHHHHC----------------
T ss_pred HHHHHHHHhCCCC-CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC---cCCHHHHHHHHHHHHHHHHhhCC----CCCCC
Confidence 9999998876544 8999999999 99999999999999986431 12322222222222111111111 01111
Q ss_pred cccccchhhhhhccccccccchhHHHH-cCC-CcccccHHHHHHHHHHHHHCCCCC
Q 037566 307 EITCFEALNTVLHLQFQHVSSMNKSRE-FGF-FGFADTMKSIRTWVKKLREMKIIP 360 (360)
Q Consensus 307 ~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~-~p~~~~~~~l~~~~~~~~~~g~ip 360 (360)
.. .... ...+..+|++|+++ ||| +| ++++|+|+++++||+++|+|+
T Consensus 294 ~~----~~~~---~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~~~ 341 (342)
T 2x4g_A 294 ET----AIEV---MAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNGYFN 341 (342)
T ss_dssp --------CC---TTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTCCC
T ss_pred HH----HHHH---HhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCCCC
Confidence 00 0000 02356899999987 799 99 999999999999999999985
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-38 Score=297.03 Aligned_cols=274 Identities=15% Similarity=0.136 Sum_probs=215.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
+||++|+++|++ +|++|++++|++.. .+++ ++.+|++|++++.+++++ +|+|||+|+....
T Consensus 30 ~iG~~l~~~L~~------~G~~V~~~~r~~~~-----~~~~-~~~~Dl~d~~~~~~~~~~----~d~vih~A~~~~~~~~ 93 (347)
T 4id9_A 30 RVGRAVVAALRT------QGRTVRGFDLRPSG-----TGGE-EVVGSLEDGQALSDAIMG----VSAVLHLGAFMSWAPA 93 (347)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEESSCCS-----SCCS-EEESCTTCHHHHHHHHTT----CSEEEECCCCCCSSGG
T ss_pred hHHHHHHHHHHh------CCCEEEEEeCCCCC-----CCcc-EEecCcCCHHHHHHHHhC----CCEEEECCcccCcchh
Confidence 589999999999 89999999998643 5788 999999999999999997 5899999985432
Q ss_pred ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHH
Q 037566 78 SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVED 157 (360)
Q Consensus 78 ~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek 157 (360)
....++++|+.||.|++++|.+. +++||||+||.+|||... ....|++|+++.. |.+.|+.+|
T Consensus 94 ~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~V~~SS~~vyg~~~----------~~~~~~~E~~~~~--~~~~Y~~sK 156 (347)
T 4id9_A 94 DRDRMFAVNVEGTRRLLDAASAA-----GVRRFVFASSGEVYPENR----------PEFLPVTEDHPLC--PNSPYGLTK 156 (347)
T ss_dssp GHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGTTTTS----------CSSSSBCTTSCCC--CCSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCHHHhCCCC----------CCCCCcCCCCCCC--CCChHHHHH
Confidence 34678999999999999999986 799999999999998621 0356799999864 477899999
Q ss_pred HHHh-------cCCCCcEEEEcCCCee-------------ecCCCCc---------chhHHHHHHHHHHHhhcCCCeeee
Q 037566 158 IAAS-------YSPAVTYSVHRSSIII-------------GASSRSL---------NNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 158 ~l~e-------~~~~~~~~ilRp~~vy-------------Gp~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
..+| ...+++++++||++|| ||++... ....... +... ...+.++.+.
T Consensus 157 ~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~ 233 (347)
T 4id9_A 157 LLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAE-LLQS--RDIGEPSHIL 233 (347)
T ss_dssp HHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHH-HHHH--HCCSSCCEEE
T ss_pred HHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHH-HHHH--HHcCCCeEEe
Confidence 8887 2468999999999999 8764210 0111111 1111 1246666677
Q ss_pred CCcccccccccc----cCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHH
Q 037566 209 GNKYTWEHFCDM----SDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMM 284 (360)
Q Consensus 209 G~~~~~~~~~d~----~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~ 284 (360)
|++. ..+++ +|++|+|++++.++..+...|++|||++|+++|+.|+++.+++.+|.+.+.. ..+
T Consensus 234 g~~~---~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~----~~p----- 301 (347)
T 4id9_A 234 ARNE---NGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTV----DFP----- 301 (347)
T ss_dssp EECT---TCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEE----ECS-----
T ss_pred CCCC---cccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCcee----eCC-----
Confidence 7765 45677 9999999999999987656689999999999999999999999999865421 000
Q ss_pred HHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 285 KEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.. .....+|++|+++ |||+|+++++|+|+++++||+++
T Consensus 302 ------------------~~----------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 340 (347)
T 4id9_A 302 ------------------GD----------------GVYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQR 340 (347)
T ss_dssp ------------------SC----------------CCBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------Cc----------------ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 00 0135789999987 79999999999999999999864
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-38 Score=290.68 Aligned_cols=262 Identities=15% Similarity=0.115 Sum_probs=207.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCChh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSEE 80 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~~ 80 (360)
+||++|+++|++ +|++|++++|++... ..+++ ++.+|++|++++.+++++- +|+|||+|+....++.
T Consensus 13 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~---~~~~~-~~~~Dl~d~~~~~~~~~~~---~d~vih~a~~~~~~~~ 79 (286)
T 3gpi_A 13 DLGLELARRLTA------QGHEVTGLRRSAQPM---PAGVQ-TLIADVTRPDTLASIVHLR---PEILVYCVAASEYSDE 79 (286)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEECTTSCC---CTTCC-EEECCTTCGGGCTTGGGGC---CSEEEECHHHHHHC--
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCcccc---ccCCc-eEEccCCChHHHHHhhcCC---CCEEEEeCCCCCCCHH
Confidence 589999999999 899999999987552 46889 9999999999999998872 6899999987556677
Q ss_pred HhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 037566 81 INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAA 160 (360)
Q Consensus 81 ~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~ 160 (360)
.++++|+.||.|++++|.+. +++||||+||.++||.. ...|++|+++.. |.+.|+.+|..+
T Consensus 80 ~~~~~n~~~~~~ll~a~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~E~~~~~--p~~~Y~~sK~~~ 140 (286)
T 3gpi_A 80 HYRLSYVEGLRNTLSALEGA-----PLQHVFFVSSTGVYGQE------------VEEWLDEDTPPI--AKDFSGKRMLEA 140 (286)
T ss_dssp ---CCSHHHHHHHHHHTTTS-----CCCEEEEEEEGGGCCCC------------CSSEECTTSCCC--CCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhC-----CCCEEEEEcccEEEcCC------------CCCCCCCCCCCC--CCChhhHHHHHH
Confidence 88999999999999999876 78999999999999853 346789999865 477899999988
Q ss_pred h--cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC-
Q 037566 161 S--YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD- 237 (360)
Q Consensus 161 e--~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~- 237 (360)
| ... ++++++||++||||+... +. ..+ ... ..++++. ...++++++|+|++++.++..+
T Consensus 141 E~~~~~-~~~~ilR~~~v~G~~~~~---~~------~~~---~~~--~~~~~~~---~~~~~i~v~Dva~~~~~~~~~~~ 202 (286)
T 3gpi_A 141 EALLAA-YSSTILRFSGIYGPGRLR---MI------RQA---QTP--EQWPARN---AWTNRIHRDDGAAFIAYLIQQRS 202 (286)
T ss_dssp HHHGGG-SSEEEEEECEEEBTTBCH---HH------HHT---TCG--GGSCSSB---CEECEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHhc-CCeEEEecccccCCCchh---HH------HHH---Hhc--ccCCCcC---ceeEEEEHHHHHHHHHHHHhhhc
Confidence 8 223 899999999999997541 11 111 111 1235544 5578999999999999998764
Q ss_pred -CCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhh
Q 037566 238 -RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNT 316 (360)
Q Consensus 238 -~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~ 316 (360)
...|++||+++|+++|++|+++.+++.+|.+.+.. .+ + ..
T Consensus 203 ~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~---~~-------------------------~--~~--------- 243 (286)
T 3gpi_A 203 HAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAG---AT-------------------------P--PV--------- 243 (286)
T ss_dssp TSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCS---CC-------------------------C--CB---------
T ss_pred cCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCC---CC-------------------------c--cc---------
Confidence 45689999999999999999999999999865421 00 0 00
Q ss_pred hhccccccccchhHHHHcCCCccc-ccHHHHHHHHHHHHH
Q 037566 317 VLHLQFQHVSSMNKSREFGFFGFA-DTMKSIRTWVKKLRE 355 (360)
Q Consensus 317 ~~~~~~~~~~d~~Kar~lG~~p~~-~~~~~l~~~~~~~~~ 355 (360)
.....+|++|+++|||+|++ +++|+|+++++|++.
T Consensus 244 ----~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~~ 279 (286)
T 3gpi_A 244 ----QGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMRE 279 (286)
T ss_dssp ----CSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHTC
T ss_pred ----CCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHhc
Confidence 12457899999988999999 799999999999954
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=290.08 Aligned_cols=280 Identities=15% Similarity=0.075 Sum_probs=212.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL--- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~--- 76 (360)
+||++|+++|++ +|++|++++|..... .....+++ ++.+|++|++++.+++++.+ +|+|+|+|+...
T Consensus 11 ~iG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~--~d~vi~~a~~~~~~~ 81 (311)
T 2p5y_A 11 FIGSHIVEDLLA------RGLEVAVLDNLATGKRENVPKGVP-FFRVDLRDKEGVERAFREFR--PTHVSHQAAQASVKV 81 (311)
T ss_dssp HHHHHHHHHHHT------TTCEEEEECCCSSCCGGGSCTTCC-EECCCTTCHHHHHHHHHHHC--CSEEEECCSCCCHHH
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCCcCchhhcccCeE-EEECCCCCHHHHHHHHHhcC--CCEEEECccccCchh
Confidence 589999999999 899999999854321 11124688 99999999999999998432 689999998532
Q ss_pred --CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccC-ccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcH
Q 037566 77 --KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGT-KHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYY 153 (360)
Q Consensus 77 --~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~-~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y 153 (360)
.++...+++|+.||.+++++|.+. +++|||++||. ++||... ...|.+|++|.. |.+.|
T Consensus 82 ~~~~~~~~~~~N~~g~~~l~~a~~~~-----~~~~iv~~SS~~~~~g~~~-----------~~~~~~E~~~~~--~~~~Y 143 (311)
T 2p5y_A 82 SVEDPVLDFEVNLLGGLNLLEACRQY-----GVEKLVFASTGGAIYGEVP-----------EGERAEETWPPR--PKSPY 143 (311)
T ss_dssp HHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEHHHHHCCCC-----------TTCCBCTTSCCC--CCSHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCCChhhcCCCC-----------CCCCcCCCCCCC--CCChH
Confidence 256678899999999999999886 68999999998 9998511 235788988754 46679
Q ss_pred HHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcc-hhHHHHHHHHHHHhhcCCCeeee-----CCcccccccccc
Q 037566 154 AVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLN-NSLLTLAVYATICRHQGLPFRYL-----GNKYTWEHFCDM 220 (360)
Q Consensus 154 ~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----G~~~~~~~~~d~ 220 (360)
+.+|...| ...+++++++||++||||+..... .......+ ..+. .+.++.+. |++. ..+++
T Consensus 144 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~g~---~~~~~ 217 (311)
T 2p5y_A 144 AASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFA-ERVL--KGLPVTLYARKTPGDEG---CVRDY 217 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHH-HHHH--HTCCEEEECSSSTTSCC---CEECE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHH-HHHH--cCCCcEEEecccCCCCC---eEEee
Confidence 99998877 235899999999999999864321 11111111 1121 35566555 7665 56799
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCC
Q 037566 221 SDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGL 300 (360)
Q Consensus 221 ~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (360)
+|++|+|++++.++..+ |++|||++|+++|++|+++.+++.+|.+.+.. ..|..
T Consensus 218 i~v~Dva~a~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~--------------------- 271 (311)
T 2p5y_A 218 VYVGDVAEAHALALFSL---EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQ--PAPPR--------------------- 271 (311)
T ss_dssp EEHHHHHHHHHHHHHHC---CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEE--EECCC---------------------
T ss_pred EEHHHHHHHHHHHHhCC---CCEEEeCCCCCccHHHHHHHHHHHhCCCCCce--eCCCC---------------------
Confidence 99999999999888653 79999999999999999999999999764311 00100
Q ss_pred CccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHC
Q 037566 301 YKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 301 ~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
. .. .....+|++|+++|||+|.++++|+|+++++||+++
T Consensus 272 ---~-~~-------------~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~ 310 (311)
T 2p5y_A 272 ---P-GD-------------LERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRGA 310 (311)
T ss_dssp ---T-TC-------------CSBCCBCCHHHHTTTCCCSSCHHHHHHHHHHHHHTC
T ss_pred ---c-cc-------------hhhccCCHHHHHHCCCCCCCCHHHHHHHHHHHHHhh
Confidence 0 00 014578999997799999999999999999999864
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-37 Score=288.58 Aligned_cols=283 Identities=13% Similarity=0.108 Sum_probs=213.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL--- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~--- 76 (360)
+||++|+++|++ +|++|++++|.+.... ....+++ ++.+|++|++++.++++..+ +|+|||+|+...
T Consensus 12 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~--~d~vih~a~~~~~~~ 82 (330)
T 2c20_A 12 YIGSHAVKKLVD------EGLSVVVVDNLQTGHEDAITEGAK-FYNGDLRDKAFLRDVFTQEN--IEAVMHFAADSLVGV 82 (330)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCSSCCGGGSCTTSE-EEECCTTCHHHHHHHHHHSC--EEEEEECCCCCCHHH
T ss_pred HHHHHHHHHHHh------CCCEEEEEeCCCcCchhhcCCCcE-EEECCCCCHHHHHHHHhhcC--CCEEEECCcccCccc
Confidence 589999999999 8999999998754321 1123788 99999999999999998432 799999998542
Q ss_pred --CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHH
Q 037566 77 --KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYA 154 (360)
Q Consensus 77 --~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~ 154 (360)
.+++.++++|+.||.+|+++|.+. +++||||+||.++||.. ...|++|++|.. |.+.|+
T Consensus 83 ~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~Ss~~~~~~~------------~~~~~~E~~~~~--~~~~Y~ 143 (330)
T 2c20_A 83 SMEKPLQYYNNNVYGALCLLEVMDEF-----KVDKFIFSSTAATYGEV------------DVDLITEETMTN--PTNTYG 143 (330)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGGCSC------------SSSSBCTTSCCC--CSSHHH
T ss_pred cccCHHHHHHHHhHHHHHHHHHHHHc-----CCCEEEEeCCceeeCCC------------CCCCCCcCCCCC--CCChHH
Confidence 256778999999999999999886 78999999999999853 245789998864 467799
Q ss_pred HHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc-------chhHHHHHHHHHHHhhcCCCeeeeC------Ccccc
Q 037566 155 VEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL-------NNSLLTLAVYATICRHQGLPFRYLG------NKYTW 214 (360)
Q Consensus 155 ~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~G------~~~~~ 214 (360)
.+|...| ...+++++++||++||||++... ....... +.......+.++.+.| ++.
T Consensus 144 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~g~-- 219 (330)
T 2c20_A 144 ETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPL--VLQVALGQREKIMMFGDDYNTPDGT-- 219 (330)
T ss_dssp HHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHH--HHHHHTTSSSCEEEECSCCSSSSSS--
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHH--HHHHHhhcCCCeEEeCCccccCCCc--
Confidence 9988877 24589999999999999974211 1112111 1111112234566666 333
Q ss_pred cccccccCHHHHHHHHHHHHcCCCC--CCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHH
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTDRA--KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWD 292 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~~~--~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
..++++|++|+|++++.++..+.. .+++||+++++++|++|+++.+++.+|.+.+.. ..|.
T Consensus 220 -~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~-------------- 282 (330)
T 2c20_A 220 -CIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAE--VAPR-------------- 282 (330)
T ss_dssp -CEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEE--EECC--------------
T ss_pred -eeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCcee--eCCC--------------
Confidence 567999999999999988865322 368999999999999999999999999764321 0000
Q ss_pred HHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCccc-ccHHHHHHHHHHHHHC
Q 037566 293 EIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFA-DTMKSIRTWVKKLREM 356 (360)
Q Consensus 293 ~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~-~~~~~l~~~~~~~~~~ 356 (360)
... . .....+|++|+++ |||+|.+ +++|+|+++++||+++
T Consensus 283 --------~~~---~-------------~~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~ 324 (330)
T 2c20_A 283 --------RAG---D-------------PARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQ 324 (330)
T ss_dssp --------CSS---C-------------CSEECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHC
T ss_pred --------CCC---c-------------ccccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHHh
Confidence 000 0 1145789999976 7999999 9999999999999875
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=286.49 Aligned_cols=284 Identities=13% Similarity=0.062 Sum_probs=213.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC------C-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW------F-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~------~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
+||++|+++|++ +|++|++++|++.... + ...+++ ++.+|++|++++.++++++. +|+|||+|+
T Consensus 25 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~Vih~A~ 95 (335)
T 1rpn_A 25 QDGAYLAKLLLE------KGYRVHGLVARRSSDTRWRLRELGIEGDIQ-YEDGDMADACSVQRAVIKAQ--PQEVYNLAA 95 (335)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCCSSCCCHHHHHTTCGGGEE-EEECCTTCHHHHHHHHHHHC--CSEEEECCS
T ss_pred hHHHHHHHHHHH------CCCeEEEEeCCCccccccchhhccccCceE-EEECCCCCHHHHHHHHHHcC--CCEEEECcc
Confidence 589999999999 8999999999765310 0 134688 99999999999999999864 699999998
Q ss_pred ecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCc-cEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 74 QRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRL-RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 74 ~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v-~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
... .++..++++|+.||.+++++|.+. ++ +||||+||.++||.. ...|++|+++..
T Consensus 96 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~v~~SS~~v~g~~------------~~~~~~E~~~~~- 157 (335)
T 1rpn_A 96 QSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-----SPETRFYQASTSEMFGLI------------QAERQDENTPFY- 157 (335)
T ss_dssp CCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-----CTTSEEEEEEEGGGGCSC------------SSSSBCTTSCCC-
T ss_pred ccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-----CCCCeEEEEeCHHHhCCC------------CCCCCCcccCCC-
Confidence 532 366788999999999999999987 65 899999999999853 235789998865
Q ss_pred CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcCC-CeeeeCCcccccccc
Q 037566 148 FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGL-PFRYLGNKYTWEHFC 218 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~~~ 218 (360)
|.+.|+.+|...| ...+++++++||+++|||+... ....... .+...+ ..+. +....|++. ..+
T Consensus 158 -p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~-~~~~~~--~~g~~~~~~~g~g~---~~~ 230 (335)
T 1rpn_A 158 -PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVT-DAVARI--KLGKQQELRLGNVD---AKR 230 (335)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH-HHHHHH--HTTSCSCEEESCTT---CEE
T ss_pred -CCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHH-HHHHHH--HcCCCceEEeCCCc---cee
Confidence 4678999998877 2248999999999999997642 2111111 111111 1233 334457765 567
Q ss_pred cccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHh
Q 037566 219 DMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKH 298 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (360)
++++++|+|++++.++..+. +++||+++++++|++|+++.+++.+|.+.... .++.. .
T Consensus 231 ~~i~v~Dva~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~~-----------------~ 288 (335)
T 1rpn_A 231 DWGFAGDYVEAMWLMLQQDK--ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDF---LKIDP-----------------A 288 (335)
T ss_dssp ECEEHHHHHHHHHHHHHSSS--CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGT---EEECG-----------------G
T ss_pred ceEEHHHHHHHHHHHHhcCC--CCEEEEeCCCCccHHHHHHHHHHHhCCCcccc---ccccc-----------------c
Confidence 89999999999999987643 58999999999999999999999999753211 11100 0
Q ss_pred CCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 299 GLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 299 ~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
...+.. .....+|++|+++ |||+|.++++|+|+++++||+++
T Consensus 289 ~~~~~~----------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 331 (335)
T 1rpn_A 289 FFRPAE----------------VDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRR 331 (335)
T ss_dssp GCCSSC----------------CCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred ccCCCc----------------chhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHHh
Confidence 000000 1145789999986 79999999999999999999763
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=288.09 Aligned_cols=282 Identities=16% Similarity=0.126 Sum_probs=215.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--CC----------CCCceeeEeeccCChHHHHHHHccCCCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--FP----------SSHVDHYITFDALDSTDTTQKLSSISQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--~~----------~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V 68 (360)
+||++|+++|++ +|++|++++|++.... .. ..+++ ++.+|++|++++.+++++ +|+|
T Consensus 38 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~v 106 (352)
T 1sb8_A 38 FIGSNLLETLLK------LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK-FIQGDIRNLDDCNNACAG----VDYV 106 (352)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEE-EEECCTTSHHHHHHHHTT----CSEE
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCCccchhhHHHHhhhcccccCCceE-EEECCCCCHHHHHHHhcC----CCEE
Confidence 489999999999 8999999999754210 00 25788 999999999999999986 5899
Q ss_pred EEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 69 FWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 69 ~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
||+|+... .++..++++|+.||.+++++|.+. +++||||+||.++||.. ...|++|++
T Consensus 107 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~------------~~~~~~E~~ 169 (352)
T 1sb8_A 107 LHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSSTYGDH------------PGLPKVEDT 169 (352)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTC------------CCSSBCTTC
T ss_pred EECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHhcCCC------------CCCCCCCCC
Confidence 99998532 356778899999999999999986 78999999999999853 245789998
Q ss_pred CCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc--chhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 144 LRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL--NNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+.. |.+.|+.+|...| ...+++++++||++||||+.... ........+ ..+. .+.++.++|++.
T Consensus 170 ~~~--~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~g~g~-- 242 (352)
T 1sb8_A 170 IGK--PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWT-SSMI--QGDDVYINGDGE-- 242 (352)
T ss_dssp CCC--CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHH-HHHH--HTCCCEEESSSC--
T ss_pred CCC--CCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHH-HHHH--CCCCcEEeCCCC--
Confidence 854 4678999988877 23489999999999999986421 111111111 1121 356666678775
Q ss_pred cccccccCHHHHHHHHHHHHcCC-CCCCCceeccCCCcccHHHHHHHHHHHh---CCCccCCCcCCCCCHHHHHHHhhHH
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD-RAKNQAFNCTNGDVFTWKSLWKLLSEIF---DVEFVPFDEKEKFDAVEMMKEKGEI 290 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~-~~~g~~yni~~g~~~s~~el~~~ia~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
..+++++++|+|++++.++..+ ...|++|||++|+++|++|+++.+++.+ |.+.... |..
T Consensus 243 -~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~----~~~----------- 306 (352)
T 1sb8_A 243 -TSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHRE----PVY----------- 306 (352)
T ss_dssp -CEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCC----CEE-----------
T ss_pred -ceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCC----cee-----------
Confidence 5679999999999999888652 3468999999999999999999999999 8765421 000
Q ss_pred HHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 291 WDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.+..+.. .....+|++|+++ |||+|+++++|+|+++++||+++
T Consensus 307 -------~~~~~~~----------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 307 -------RDFREGD----------------VRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 350 (352)
T ss_dssp -------ECCCTTC----------------CSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred -------cCCCccc----------------hhhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 0000000 1145789999976 79999999999999999999763
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=288.41 Aligned_cols=277 Identities=15% Similarity=0.115 Sum_probs=208.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
+||++|+++|++ +|+ +... ....++ ++.+|++|++++.+++++.+ +|+|||+|+...
T Consensus 17 ~iG~~l~~~L~~------~g~------~~~~----~~~~~~-~~~~D~~d~~~~~~~~~~~~--~d~Vih~A~~~~~~~~ 77 (319)
T 4b8w_A 17 LVGKAIQKVVAD------GAG------LPGE----DWVFVS-SKDADLTDTAQTRALFEKVQ--PTHVIHLAAMVGGLFR 77 (319)
T ss_dssp HHHHHHHHHHHT------TTC------CTTC----EEEECC-TTTCCTTSHHHHHHHHHHSC--CSEEEECCCCCCCHHH
T ss_pred HHHHHHHHHHHh------cCC------cccc----cccccC-ceecccCCHHHHHHHHhhcC--CCEEEECceecccccc
Confidence 589999999998 787 2111 124567 78999999999999999864 799999998632
Q ss_pred --CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC--CCCCC-
Q 037566 77 --KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL--PFPNF- 151 (360)
Q Consensus 77 --~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~--p~p~~- 151 (360)
.++..++++|+.||.||+++|++. +++||||+||..+||.. ...|++|+++.. +.|..
T Consensus 78 ~~~~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~E~~~~~~~~~p~~~ 140 (319)
T 4b8w_A 78 NIKYNLDFWRKNVHMNDNVLHSAFEV-----GARKVVSCLSTCIFPDK------------TTYPIDETMIHNGPPHNSNF 140 (319)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEECCGGGSCSS------------CCSSBCGGGGGBSCCCSSSH
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEEcchhhcCCC------------CCCCccccccccCCCCCCcc
Confidence 366778999999999999999987 79999999999999853 356889987321 23444
Q ss_pred cHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc--chhHHHHHHHHHHH-hhcCCCeeeeCCccccccccccc
Q 037566 152 YYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL--NNSLLTLAVYATIC-RHQGLPFRYLGNKYTWEHFCDMS 221 (360)
Q Consensus 152 ~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~d~~ 221 (360)
.|+.+|..+| +..+++++++||++||||+.... .....+..+...+. ...+.++.++|++. ..++++
T Consensus 141 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~i 217 (319)
T 4b8w_A 141 GYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGN---PRRQFI 217 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSC---CEECEE
T ss_pred hHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCC---eeEEEE
Confidence 4999898887 23589999999999999986421 11111111111100 12467777788876 567999
Q ss_pred CHHHHHHHHHHHHcCCC-CCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCC
Q 037566 222 DSRVLAEQQIWAATTDR-AKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGL 300 (360)
Q Consensus 222 ~v~dla~a~~~a~~~~~-~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (360)
|++|+|++++.++..+. ..+++|||++|+++|+.|+++.+++.+|.+.+... .+
T Consensus 218 ~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~----------------------- 272 (319)
T 4b8w_A 218 YSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTF--DT----------------------- 272 (319)
T ss_dssp EHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEE--ET-----------------------
T ss_pred eHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEe--CC-----------------------
Confidence 99999999999987643 34789999999999999999999999997643110 00
Q ss_pred CccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 301 YKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 301 ~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.... . .....+|++|+++ |||.|.++++|+|+++++||+++
T Consensus 273 -~~~~-~-------------~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 314 (319)
T 4b8w_A 273 -TKSD-G-------------QFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDN 314 (319)
T ss_dssp -TSCC-C-------------CSCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHHS
T ss_pred -CCCc-C-------------cccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 0000 0 1145789999987 79999999999999999999875
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=283.94 Aligned_cols=283 Identities=17% Similarity=0.152 Sum_probs=214.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
+||++|+++|++ +|++|++++|++.... .+++ ++.+|++|++++.+++++.. +|+|||+|+...
T Consensus 23 ~iG~~l~~~L~~------~G~~V~~~~r~~~~~~---l~~~-~~~~Dl~d~~~~~~~~~~~~--~d~vih~A~~~~~~~~ 90 (321)
T 2pk3_A 23 FVGKYLANHLTE------QNVEVFGTSRNNEAKL---PNVE-MISLDIMDSQRVKKVISDIK--PDYIFHLAAKSSVKDS 90 (321)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESCTTCCC---TTEE-EEECCTTCHHHHHHHHHHHC--CSEEEECCSCCCHHHH
T ss_pred hHHHHHHHHHHH------CCCEEEEEecCCcccc---ceee-EEECCCCCHHHHHHHHHhcC--CCEEEEcCcccchhhh
Confidence 589999999999 8999999999865421 2788 99999999999999998743 689999998532
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.++..++++|+.||.+++++|.+. .+++||||+||.++||.... ...|++|++|.. |.+.|+.
T Consensus 91 ~~~~~~~~~~Nv~g~~~l~~a~~~~----~~~~~iv~~SS~~v~g~~~~----------~~~~~~E~~~~~--~~~~Y~~ 154 (321)
T 2pk3_A 91 WLNKKGTFSTNVFGTLHVLDAVRDS----NLDCRILTIGSSEEYGMILP----------EESPVSEENQLR--PMSPYGV 154 (321)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHH----TCCCEEEEEEEGGGTBSCCG----------GGCSBCTTSCCB--CCSHHHH
T ss_pred hhcHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEccHHhcCCCCC----------CCCCCCCCCCCC--CCCccHH
Confidence 256788999999999999999664 25899999999999985200 135789998754 4678999
Q ss_pred HHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHh-hcC--CCeeeeCCcccccccccccCHHH
Q 037566 156 EDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICR-HQG--LPFRYLGNKYTWEHFCDMSDSRV 225 (360)
Q Consensus 156 ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~G~~~~~~~~~d~~~v~d 225 (360)
+|...| ...+++++++||++||||+.... .... ..+ ..+.+ ..| .++...|++. ...++++++|
T Consensus 155 sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~-~~~-~~~~~~~~g~~~~~~~~~~~~---~~~~~v~v~D 228 (321)
T 2pk3_A 155 SKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQ-DFA-KQIVDIEMEKQEPIIKVGNLE---AVRDFTDVRD 228 (321)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHH-HHH-HHHHHHHTTSSCSEEEESCSS---CEEEEEEHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHH-HHH-HHHHHHhcCCCCCeEEeCCCC---cEEeeEEHHH
Confidence 998877 22489999999999999986431 1111 111 11111 014 4666667665 5578999999
Q ss_pred HHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCc
Q 037566 226 LAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKM 305 (360)
Q Consensus 226 la~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 305 (360)
+|++++.++..+ ..|++|||++|+.+|++|+++.+++.+|.+.+.. +.+. + +.+..
T Consensus 229 va~a~~~~~~~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~----~~p~----------~--------~~~~~- 284 (321)
T 2pk3_A 229 IVQAYWLLSQYG-KTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTE----LNPL----------Q--------LRPSE- 284 (321)
T ss_dssp HHHHHHHHHHHC-CTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEE----ECGG----------G--------CCSSC-
T ss_pred HHHHHHHHHhCC-CCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCcee----eccc----------c--------CCCcc-
Confidence 999999988755 4589999999999999999999999999764321 1110 0 00000
Q ss_pred ccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 306 EEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 306 ~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.....+|++|+++ |||+|.++++|+|+++++||+++
T Consensus 285 ---------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 321 (321)
T 2pk3_A 285 ---------------VPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQA 321 (321)
T ss_dssp ---------------CSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHTC
T ss_pred ---------------cchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhcC
Confidence 1246889999987 79999999999999999999864
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=285.62 Aligned_cols=284 Identities=11% Similarity=0.028 Sum_probs=212.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCC------CC-----C---CCCCceeeEeeccCChHHHHHHHccCCCCcc
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPP------SW-----F---PSSHVDHYITFDALDSTDTTQKLSSISQEVT 66 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~------~~-----~---~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~ 66 (360)
+||++|+++|++ +|++|++++|.... .. + ...+++ ++.+|++|++++.+++++.+ +|
T Consensus 13 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~--~d 83 (348)
T 1ek6_A 13 YIGSHTVLELLE------AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE-FEEMDILDQGALQRLFKKYS--FM 83 (348)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCE-EEECCTTCHHHHHHHHHHCC--EE
T ss_pred HHHHHHHHHHHH------CCCEEEEEecCCcccccccccHHHHHHHHhccCCceE-EEECCCCCHHHHHHHHHhcC--CC
Confidence 589999999999 89999999986432 10 0 124688 99999999999999998543 79
Q ss_pred EEEEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 67 HLFWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 67 ~V~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|||+|+... .++..++++|+.||.+++++|.+. +++||||+||.++||.. ...|++|
T Consensus 84 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~g~~------------~~~~~~E 146 (348)
T 1ek6_A 84 AVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-----GVKNLVFSSSATVYGNP------------QYLPLDE 146 (348)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCSC------------SSSSBCT
T ss_pred EEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEECcHHHhCCC------------CCCCcCC
Confidence 9999998532 256678999999999999999886 78999999999999853 2467899
Q ss_pred CCCCCCCCCCcHHHHHHHHh-------cC-CCCcEEEEcCCCeeecCCCC-----c---chhHHHHHHHHHHHhhcCCCe
Q 037566 142 DSLRLPFPNFYYAVEDIAAS-------YS-PAVTYSVHRSSIIIGASSRS-----L---NNSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e-------~~-~~~~~~ilRp~~vyGp~~~~-----~---~~~~~~~~~~~~~~~~~~~~~ 205 (360)
+++..| ..+.|+.+|...| .. .+++++++||++||||++.. . ...+... +.. ..+..+.++
T Consensus 147 ~~~~~p-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~-~~~-~~~~~~~~~ 223 (348)
T 1ek6_A 147 AHPTGG-CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPY-VSQ-VAIGRREAL 223 (348)
T ss_dssp TSCCCC-CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHH-HHH-HHHTSSSCE
T ss_pred CCCCCC-CCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHH-HHH-HHHhcCCCe
Confidence 987643 1567999888777 12 34999999999999995311 0 1111111 111 112235566
Q ss_pred eeeC------CcccccccccccCHHHHHHHHHHHHcCCC-CCC-CceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCC
Q 037566 206 RYLG------NKYTWEHFCDMSDSRVLAEQQIWAATTDR-AKN-QAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEK 277 (360)
Q Consensus 206 ~~~G------~~~~~~~~~d~~~v~dla~a~~~a~~~~~-~~g-~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~ 277 (360)
.+.| ++. ..++++|++|+|++++.++..+. ..| ++|||++++++|++|+++.+++.+|.+.+.. ..|
T Consensus 224 ~~~g~~~~~~~g~---~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~ 298 (348)
T 1ek6_A 224 NVFGNDYDTEDGT---GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK--VVA 298 (348)
T ss_dssp EEECSCSSSSSSS---CEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEE--EEC
T ss_pred EEeCCcccCCCCc---eEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCcee--eCC
Confidence 6666 333 56799999999999998886542 344 8999999999999999999999999764311 000
Q ss_pred CCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 278 FDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.. ... .....+|++|+++ |||+|+++++|+|+++++||+++
T Consensus 299 ~~----------------------~~~----------------~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~ 340 (348)
T 1ek6_A 299 RR----------------------EGD----------------VAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN 340 (348)
T ss_dssp CC----------------------TTC----------------CSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred CC----------------------Ccc----------------chhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhc
Confidence 00 000 1145789999976 79999999999999999999875
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=284.27 Aligned_cols=278 Identities=13% Similarity=0.122 Sum_probs=212.5
Q ss_pred CchHHHHHHHhcCCCCCCC---C---cEEEEEecCCCCC---C----CCCCCceeeEeeccCChHHHHHHHccCCCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGG---P---WKVYGTARRPPPS---W----FPSSHVDHYITFDALDSTDTTQKLSSISQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~---g---~~V~~l~r~~~~~---~----~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~ 67 (360)
+||++|+++|++ + | ++|++++|.+... . ....+++ ++.+|++|++++.+++.+ +|+
T Consensus 11 ~iG~~l~~~L~~------~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~ 79 (337)
T 1r6d_A 11 FIGSHFVRQLLA------GAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLR-FVHGDIRDAGLLARELRG----VDA 79 (337)
T ss_dssp HHHHHHHHHHHH------TSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEE-EEECCTTCHHHHHHHTTT----CCE
T ss_pred HHHHHHHHHHHh------hhcCCCCceEEEEEECCCccCchhhhhhcccCCCeE-EEEcCCCCHHHHHHHhcC----CCE
Confidence 589999999998 6 8 9999999965311 0 1135788 999999999999999866 689
Q ss_pred EEEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 68 LFWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 68 V~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|||+|+... .+++.++++|+.||.|++++|.+. +++||||+||.++||.. ...+++|+
T Consensus 80 Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~E~ 142 (337)
T 1r6d_A 80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVSTNQVYGSI------------DSGSWTES 142 (337)
T ss_dssp EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCCC------------SSSCBCTT
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEecchHHhCCC------------CCCCCCCC
Confidence 999998543 256678999999999999999986 68999999999999853 23578898
Q ss_pred CCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 143 SLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
+|.. |.+.|+.+|...| ...+++++++||++||||+... .+.. ...+ ..+ ..+.++.+.|++.
T Consensus 143 ~~~~--~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~-~~~~-~~~~-~~~--~~~~~~~~~~~~~--- 212 (337)
T 1r6d_A 143 SPLE--PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP-EKLI-PLFV-TNL--LDGGTLPLYGDGA--- 212 (337)
T ss_dssp SCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT-TSHH-HHHH-HHH--HTTCCEEEETTSC---
T ss_pred CCCC--CCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC-CChH-HHHH-HHH--hcCCCcEEeCCCC---
Confidence 8754 4677999998877 2358999999999999998632 1111 1111 111 1356667777765
Q ss_pred ccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHH
Q 037566 216 HFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIV 295 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (360)
...++++++|+|++++.++..+ ..|++|||++|+++|+.|+++.+++.+|.+.+.. .+
T Consensus 213 ~~~~~i~v~Dva~a~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~----~~----------------- 270 (337)
T 1r6d_A 213 NVREWVHTDDHCRGIALVLAGG-RAGEIYHIGGGLELTNRELTGILLDSLGADWSSV----RK----------------- 270 (337)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGE----EE-----------------
T ss_pred eeEeeEeHHHHHHHHHHHHhCC-CCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccc----ee-----------------
Confidence 5578999999999999888654 4689999999999999999999999999764311 00
Q ss_pred HHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 296 EKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
....+ .. .....+|++|+++ |||+|.++++|+|+++++||+++
T Consensus 271 ----~~~~~-~~-------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 314 (337)
T 1r6d_A 271 ----VADRK-GH-------------DLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314 (337)
T ss_dssp ----ECCCT-TC-------------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred ----cCCCC-CC-------------cceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhc
Confidence 00000 00 1134689999986 79999999999999999999875
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=287.73 Aligned_cols=297 Identities=13% Similarity=0.129 Sum_probs=212.0
Q ss_pred CchHHHHHHHhcCCCCCCC-CcEEEEEecCCCCC--CCCCCCceeeEeeccCCh-HHHHHHHccCCCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGG-PWKVYGTARRPPPS--WFPSSHVDHYITFDALDS-TDTTQKLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~-~~l~~~l~~~~~~v~~V~h~A~~~~ 76 (360)
+||++|+++|++ + |++|++++|++... .....+++ ++.+|++|. +.+.+++++ +|+|||+|+...
T Consensus 11 ~iG~~l~~~L~~------~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~----~d~vih~A~~~~ 79 (345)
T 2bll_A 11 FIGNHLTERLLR------EDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEWIEYHVKK----CDVVLPLVAIAT 79 (345)
T ss_dssp HHHHHHHHHHHH------STTCEEEEEESCCGGGGGGTTCTTEE-EEECCTTTCSHHHHHHHHH----CSEEEECBCCCC
T ss_pred HHHHHHHHHHHH------hCCCEEEEEeCCcchHHHhhcCCCeE-EEeccccCcHHHHHhhccC----CCEEEEcccccC
Confidence 589999999998 7 89999999976432 11245789 999999985 568888887 589999998533
Q ss_pred -----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC---C-
Q 037566 77 -----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL---P- 147 (360)
Q Consensus 77 -----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~---p- 147 (360)
.++..++++|+.||.+++++|.+. + +||||+||.++||.. ...+++|+++.. |
T Consensus 80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~-~~~v~~SS~~v~g~~------------~~~~~~e~~~~~~~~~~ 141 (345)
T 2bll_A 80 PIEYTRNPLRVFELDFEENLRIIRYCVKY-----R-KRIIFPSTSEVYGMC------------SDKYFDEDHSNLIVGPV 141 (345)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----T-CEEEEECCGGGGBTC------------CCSSBCTTTCCCBCCCT
T ss_pred ccchhcCHHHHHHHHHHHHHHHHHHHHHh-----C-CeEEEEecHHHcCCC------------CCCCcCCcccccccCcc
Confidence 256678899999999999999886 5 899999999999853 234678887542 1
Q ss_pred -CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc------chhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 148 -FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL------NNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 148 -~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
.|.+.|+.+|...| ...+++++++||++||||+.... ........+ ..+ ..+.++.++|++.
T Consensus 142 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~g~- 217 (345)
T 2bll_A 142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLI-LNL--VEGSPIKLIDGGK- 217 (345)
T ss_dssp TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHH-HHH--HHTCCEEEGGGSC-
T ss_pred cCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHH-HHH--HcCCCcEEECCCC-
Confidence 24557999888777 23589999999999999986421 011111111 111 1356666677665
Q ss_pred ccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC-cccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHH
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD-VFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEI 290 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~-~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
..++++|++|+|++++.++..+. ..|++|||++++ ++|++|+++.+++.+|.+.... ..|.............
T Consensus 218 --~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~ 293 (345)
T 2bll_A 218 --QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRH--HFPPFAGFRVVESSSY 293 (345)
T ss_dssp --CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGG--GSCCCCCEEEC-----
T ss_pred --EEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccc--cCccccccccccchhh
Confidence 55789999999999999987653 458999999996 8999999999999999764321 0111100000000000
Q ss_pred HHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCC
Q 037566 291 WDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMK 357 (360)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g 357 (360)
+ + .... + .....+|++|+++ |||+|+++++|+|+++++||+++.
T Consensus 294 ~----~------~~~~--------~-----~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~ 338 (345)
T 2bll_A 294 Y----G------KGYQ--------D-----VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV 338 (345)
T ss_dssp ------------------------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred c----c------cccc--------c-----hhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcC
Confidence 0 0 0000 0 1245789999986 799999999999999999998754
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-36 Score=281.90 Aligned_cols=287 Identities=11% Similarity=0.037 Sum_probs=208.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--C------CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--F------PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--~------~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+||++|+++|++ +|++|++++|...... . ...+++ ++.+|++|++++.+++++.. +|+|||+|
T Consensus 11 ~iG~~l~~~L~~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~--~D~vih~A 81 (338)
T 1udb_A 11 YIGSHTCVQLLQ------NGHDVIILDNLCNSKRSVLPVIERLGGKHPT-FVEGDIRNEALMTEILHDHA--IDTVIHFA 81 (338)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCSSCCTTHHHHHHHHHTSCCE-EEECCTTCHHHHHHHHHHTT--CSEEEECC
T ss_pred HHHHHHHHHHHH------CCCEEEEEecCCCcchhHHHHHHhhcCCcce-EEEccCCCHHHHHHHhhccC--CCEEEECC
Confidence 589999999999 8999999987533210 0 024578 89999999999999998653 79999999
Q ss_pred eecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 73 FQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 73 ~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
+... .++.+++++|+.||.+++++|++. +++|||++||.++||.. ...|++|+.+..|
T Consensus 82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~g~~------------~~~~~~e~~~~~~ 144 (338)
T 1udb_A 82 GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSATVYGDN------------PKIPYVESFPTGT 144 (338)
T ss_dssp SCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSC------------CSSSBCTTSCCCC
T ss_pred ccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEEccHHHhCCC------------CCCCcCcccCCCC
Confidence 8532 245678899999999999999887 68999999999999853 2457889887543
Q ss_pred CCCCcHHHHHHHHh-------cC-CCCcEEEEcCCCeeecCCCC--------cchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 148 FPNFYYAVEDIAAS-------YS-PAVTYSVHRSSIIIGASSRS--------LNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e-------~~-~~~~~~ilRp~~vyGp~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+.+.|+.+|...| .. .+++++++||++||||.+.. ....+... +..+....+.++...|+.
T Consensus 145 -~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~ 221 (338)
T 1udb_A 145 -PQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPY--IAQVAVGRRDSLAIFGND 221 (338)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHH--HHHHHHTSSSCEEEECSC
T ss_pred -CCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHH--HHHHHHhcCCCcEEecCc
Confidence 3667999888777 12 37999999999999985311 01111111 111111123445554421
Q ss_pred c---cccccccccCHHHHHHHHHHHHcCCC-CC-CCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHH
Q 037566 212 Y---TWEHFCDMSDSRVLAEQQIWAATTDR-AK-NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKE 286 (360)
Q Consensus 212 ~---~~~~~~d~~~v~dla~a~~~a~~~~~-~~-g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~ 286 (360)
. .-...+|++|++|+|++++.++..+. .. +++|||++++++|++|+++.+++.+|.+.+.. ..|.
T Consensus 222 ~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~-------- 291 (338)
T 1udb_A 222 YPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYH--FAPR-------- 291 (338)
T ss_dssp SSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEE--EECC--------
T ss_pred ccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcce--eCCC--------
Confidence 0 01256799999999999998876431 23 48999999999999999999999999754311 0000
Q ss_pred hhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 287 KGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 287 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.+.. .....+|++|+++ |||+|+++++|+|+++++||+++
T Consensus 292 --------------~~~~----------------~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~ 332 (338)
T 1udb_A 292 --------------REGD----------------LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_dssp --------------CTTC----------------CSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred --------------CCCc----------------hhhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHHHhc
Confidence 0000 0135789999976 79999999999999999999875
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=280.25 Aligned_cols=279 Identities=11% Similarity=0.057 Sum_probs=209.9
Q ss_pred CchHHHHHHHhcCCCCCCCC--cEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGP--WKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ +| ++|++++|.+... .....+++ ++.+|++|++++.+++.+ +|+|||+
T Consensus 14 ~iG~~l~~~L~~------~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~vih~ 82 (336)
T 2hun_A 14 FIGSNFIRYILE------KHPDWEVINIDKLGYGSNPANLKDLEDDPRYT-FVKGDVADYELVKELVRK----VDGVVHL 82 (336)
T ss_dssp HHHHHHHHHHHH------HCTTCEEEEEECCCTTCCGGGGTTTTTCTTEE-EEECCTTCHHHHHHHHHT----CSEEEEC
T ss_pred hHHHHHHHHHHH------hCCCCEEEEEecCcccCchhHHhhhccCCceE-EEEcCCCCHHHHHHHhhC----CCEEEEC
Confidence 589999999998 65 8999999864211 01135788 999999999999999966 6899999
Q ss_pred eeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 72 MFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 72 A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
|+... .++..++++|+.||.|++++|.+. + ..+||||+||.++||.. ...|++|+++..
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS~~vyg~~------------~~~~~~E~~~~~ 146 (336)
T 2hun_A 83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRE---N-PEVRFVHVSTDEVYGDI------------LKGSFTENDRLM 146 (336)
T ss_dssp CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHH---C-TTSEEEEEEEGGGGCCC------------SSSCBCTTBCCC
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-CCcEEEEeccHHHHCCC------------CCCCcCCCCCCC
Confidence 98532 256678999999999999999986 2 23799999999999853 235789988754
Q ss_pred CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 147 PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
|.+.|+.+|...| ...+++++++||++||||+.... ... ...+ ..+ ..+.++++.|++. ...+
T Consensus 147 --~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~-~~~~-~~~--~~~~~~~~~~~~~---~~~~ 216 (336)
T 2hun_A 147 --PSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLI-PKTI-IRA--SLGLKIPIYGTGK---NVRD 216 (336)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHH-HHHH-HHH--HTTCCEEEETC------CEE
T ss_pred --CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chH-HHHH-HHH--HcCCCceEeCCCC---ceee
Confidence 4677999998877 23589999999999999986321 111 1111 111 1356677777765 5578
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhC
Q 037566 220 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHG 299 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
+++++|+|++++.++..+ ..|++|||++|+++|++|+++.+++.+|.+.+.. .+.
T Consensus 217 ~i~v~Dva~~~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~----~~~-------------------- 271 (336)
T 2hun_A 217 WLYVEDHVRAIELVLLKG-ESREIYNISAGEEKTNLEVVKIILRLMGKGEELI----ELV-------------------- 271 (336)
T ss_dssp EEEHHHHHHHHHHHHHHC-CTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTE----EEE--------------------
T ss_pred eEEHHHHHHHHHHHHhCC-CCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccc----ccc--------------------
Confidence 999999999999888643 4689999999999999999999999999754311 000
Q ss_pred CCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 300 l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
...+ .. .....+|++|+++ |||+|.++++|+|+++++||+++
T Consensus 272 -~~~~-~~-------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 314 (336)
T 2hun_A 272 -EDRP-GH-------------DLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN 314 (336)
T ss_dssp -CCCT-TC-------------CCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred -CCCC-Cc-------------hhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence 0000 00 1134789999987 79999999999999999999875
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-36 Score=287.21 Aligned_cols=284 Identities=11% Similarity=0.047 Sum_probs=213.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR---- 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~---- 75 (360)
+||++|+++|++ +|++|++++|++.... ....+++ ++.+|++|++++.+++++ +|+|||+|+..
T Consensus 40 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~v~-~~~~Dl~d~~~~~~~~~~----~d~Vih~A~~~~~~~ 108 (379)
T 2c5a_A 40 FIASHIARRLKH------EGHYVIASDWKKNEHMTEDMFCDE-FHLVDLRVMENCLKVTEG----VDHVFNLAADMGGMG 108 (379)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSCCSSSCGGGTCSE-EEECCTTSHHHHHHHHTT----CSEEEECCCCCCCHH
T ss_pred HHHHHHHHHHHH------CCCeEEEEECCCccchhhccCCce-EEECCCCCHHHHHHHhCC----CCEEEECceecCccc
Confidence 589999999999 8999999999865421 1234789 999999999999999987 58999999853
Q ss_pred --CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcH
Q 037566 76 --LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYY 153 (360)
Q Consensus 76 --~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y 153 (360)
..++.+++++|+.||.|++++|.+. +++||||+||.++||... +. .+...+++|+++..+.|.+.|
T Consensus 109 ~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~~V~~SS~~v~~~~~------~~-~~~~~~~~E~~~~~~~~~~~Y 176 (379)
T 2c5a_A 109 FIQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFYASSACIYPEFK------QL-ETTNVSLKESDAWPAEPQDAF 176 (379)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEEEGGGSCGGG------SS-SSSSCEECGGGGSSBCCSSHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeehheeCCCC------CC-CccCCCcCcccCCCCCCCChh
Confidence 2356788999999999999999886 789999999999998531 00 001245788773222356789
Q ss_pred HHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcch--hHHHHHHHHHHHhhcCCC-eeeeCCcccccccccccCH
Q 037566 154 AVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNN--SLLTLAVYATICRHQGLP-FRYLGNKYTWEHFCDMSDS 223 (360)
Q Consensus 154 ~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~G~~~~~~~~~d~~~v 223 (360)
+.+|...| ...+++++++||++||||+...... ..... +...+. .+.+ +.++|++. ...+++++
T Consensus 177 ~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~g~g~---~~~~~i~v 250 (379)
T 2c5a_A 177 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAA-FCRKAQ--TSTDRFEMWGDGL---QTRSFTFI 250 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHH-HHHHHH--HCSSCEEEESCSC---CEECCEEH
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHH-HHHHHH--hCCCceEEeCCCC---eeEEEEEH
Confidence 99988877 2358999999999999997642111 01111 111121 2444 66678765 45799999
Q ss_pred HHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCcc
Q 037566 224 RVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKT 303 (360)
Q Consensus 224 ~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 303 (360)
+|+|++++.++..+ .+++|||++++.+|++|+++.+++.+|.+.+.. ..|.+
T Consensus 251 ~Dva~ai~~~l~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~--~~p~~------------------------ 302 (379)
T 2c5a_A 251 DECVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH--HIPGP------------------------ 302 (379)
T ss_dssp HHHHHHHHHHHHSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEE--EECCC------------------------
T ss_pred HHHHHHHHHHhhcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCCcee--eCCCC------------------------
Confidence 99999999988754 578999999999999999999999999764321 01100
Q ss_pred CcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 304 KMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 304 ~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
. . .....+|++|+++ |||+|.++++|+|+++++||+++
T Consensus 303 ~--~-------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 341 (379)
T 2c5a_A 303 E--G-------------VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ 341 (379)
T ss_dssp C--C-------------CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred C--C-------------cccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 0 0 0134789999986 79999999999999999999764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=285.61 Aligned_cols=278 Identities=12% Similarity=0.077 Sum_probs=209.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCC------------CC--CCCCCCceeeEeeccCChHHHHHH-HccCCCCc
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPP------------PS--WFPSSHVDHYITFDALDSTDTTQK-LSSISQEV 65 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~------------~~--~~~~~~v~~~v~gDl~d~~~l~~~-l~~~~~~v 65 (360)
+||++|+++|++ ..+|++|++++|.+. .. .....+++ ++.+|++|++++.++ ..+ +
T Consensus 21 ~IG~~l~~~L~~----~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~----~ 91 (362)
T 3sxp_A 21 FVGSNLAFHFQE----NHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGE-VIAADINNPLDLRRLEKLH----F 91 (362)
T ss_dssp HHHHHHHHHHHH----HCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSE-EEECCTTCHHHHHHHTTSC----C
T ss_pred HHHHHHHHHHHh----hCCCCeEEEEECCCccccccccchhhhhhhhhccccCce-EEECCCCCHHHHHHhhccC----C
Confidence 589999999996 114899999999654 11 11234678 999999999999988 444 6
Q ss_pred cEEEEeeeecC---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 66 THLFWVMFQRL---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 66 ~~V~h~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+|||+|+... .++...+++|+.||.|++++|++. +++ |||+||+++||.. ..|++|+
T Consensus 92 D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~~~-~V~~SS~~vyg~~-------------~~~~~E~ 152 (362)
T 3sxp_A 92 DYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-----KAK-VIYASSAGVYGNT-------------KAPNVVG 152 (362)
T ss_dssp SEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-----TCE-EEEEEEGGGGCSC-------------CSSBCTT
T ss_pred CEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-----CCc-EEEeCcHHHhCCC-------------CCCCCCC
Confidence 89999998532 467889999999999999999886 677 9999999999853 2388999
Q ss_pred CCCCCCCCCcHHHHHHHHh-----cCCCCcEEEEcCCCeeecCCCCcch--hHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 143 SLRLPFPNFYYAVEDIAAS-----YSPAVTYSVHRSSIIIGASSRSLNN--SLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e-----~~~~~~~~ilRp~~vyGp~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
++.. |.+.|+.+|...| ....++++++||++||||+...... ..... +...+ ..+.++.+.|++.
T Consensus 153 ~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~g~--- 224 (362)
T 3sxp_A 153 KNES--PENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQ-LALGA--MAFKEVKLFEFGE--- 224 (362)
T ss_dssp SCCC--CSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHH-HHHHH--HTTSEEECSGGGC---
T ss_pred CCCC--CCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHH-HHHHH--HhCCCeEEECCCC---
Confidence 9865 5778999999888 2223899999999999998642110 11111 11111 1356666667765
Q ss_pred ccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHH
Q 037566 216 HFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIV 295 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (360)
...++++++|+|++++.++..+ ..| +|||++|+++|+.|+++.+++.+| +.+.. ..|.+.
T Consensus 225 ~~~~~i~v~Dva~ai~~~~~~~-~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~--~~~~~~--------------- 284 (362)
T 3sxp_A 225 QLRDFVYIEDVIQANVKAMKAQ-KSG-VYNVGYSQARSYNEIVSILKEHLG-DFKVT--YIKNPY--------------- 284 (362)
T ss_dssp CEEECEEHHHHHHHHHHHTTCS-SCE-EEEESCSCEEEHHHHHHHHHHHHC-CCEEE--CCC------------------
T ss_pred eEEccEEHHHHHHHHHHHHhcC-CCC-EEEeCCCCCccHHHHHHHHHHHcC-CCceE--ECCCCC---------------
Confidence 5679999999999999988754 456 999999999999999999999999 44311 011110
Q ss_pred HHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 296 EKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
. . ...+..+|++|+++ |||+|.++++|+|+++++||++.
T Consensus 285 --------~--~------------~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 324 (362)
T 3sxp_A 285 --------A--F------------FQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI 324 (362)
T ss_dssp --------------------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred --------c--C------------cccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 0 0 01246889999965 89999999999999999999764
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=280.38 Aligned_cols=288 Identities=11% Similarity=0.055 Sum_probs=212.1
Q ss_pred CchHHHHHHHhcCCCCCCC--CcEEEEEecCCCCC---C---CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGG--PWKVYGTARRPPPS---W---FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~--g~~V~~l~r~~~~~---~---~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+||++|+++|++ + |++|++++|.+... . ....+++ ++.+|++|++++.++++++ |+|||+|
T Consensus 15 ~iG~~l~~~L~~------~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~----d~vih~A 83 (348)
T 1oc2_A 15 FIGSNFVHYVYN------NHPDVHVTVLDKLTYAGNKANLEAILGDRVE-LVVGDIADAELVDKLAAKA----DAIVHYA 83 (348)
T ss_dssp HHHHHHHHHHHH------HCTTCEEEEEECCCTTCCGGGTGGGCSSSEE-EEECCTTCHHHHHHHHTTC----SEEEECC
T ss_pred HHHHHHHHHHHH------hCCCCEEEEEeCCCCCCChhHHhhhccCCeE-EEECCCCCHHHHHHHhhcC----CEEEECC
Confidence 589999999998 7 89999999975321 0 1135789 9999999999999999884 7999999
Q ss_pred eecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcccccccc-CCcccCCcCCCCCCCCCCCCCC
Q 037566 73 FQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVF-DPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 73 ~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~-~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
+... .+++.++++|+.||.+++++|.+. ++ ||||+||.++||.... .+ ..+.......+++|++|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-----~~-~~v~~SS~~vyg~~~~~~~-~~~~~~~~~~~~~E~~~~~ 156 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-----DI-RFHHVSTDEVYGDLPLRED-LPGHGEGPGEKFTAETNYN 156 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-----TC-EEEEEEEGGGGCCBCCGGG-STTTTCSTTSSBCTTSCCC
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-----CC-eEEEecccceeCCCccccc-ccccccccCCCcCCCCCCC
Confidence 8542 256678999999999999999987 56 9999999999985310 00 0000000125788988754
Q ss_pred CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 147 PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
|.+.|+.+|...| ...+++++++||++||||+.... ... ...+ ..+. .+.++.+.|++. ...+
T Consensus 157 --~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~-~~~~-~~~~--~~~~~~~~~~~~---~~~~ 226 (348)
T 1oc2_A 157 --PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFI-PRQI-TNIL--AGIKPKLYGEGK---NVRD 226 (348)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHH-HHHH-HHHH--HTCCCEEETTSC---CEEE
T ss_pred --CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chH-HHHH-HHHH--cCCCceEecCCC---ceEe
Confidence 4677999998877 23489999999999999986421 111 1111 1111 355666667765 5678
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhC
Q 037566 220 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHG 299 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
+++++|+|++++.++..+ ..|++|||++|+++|++|+++.+++.+|.+.+.+ .+.
T Consensus 227 ~i~v~Dva~~~~~~~~~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~----~~~-------------------- 281 (348)
T 1oc2_A 227 WIHTNDHSTGVWAILTKG-RMGETYLIGADGEKNNKEVLELILEKMGQPKDAY----DHV-------------------- 281 (348)
T ss_dssp CEEHHHHHHHHHHHHHHC-CTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCS----EEE--------------------
T ss_pred eEEHHHHHHHHHHHhhCC-CCCCeEEeCCCCCCCHHHHHHHHHHHhCCCcccc----ccC--------------------
Confidence 999999999999888644 4689999999999999999999999999764321 000
Q ss_pred CCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccc-cHHHHHHHHHHHHHC
Q 037566 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFAD-TMKSIRTWVKKLREM 356 (360)
Q Consensus 300 l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~-~~~~l~~~~~~~~~~ 356 (360)
...+ .. .....+|++|+++ |||+|+++ ++|+|+++++||+++
T Consensus 282 -~~~~-~~-------------~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~ 325 (348)
T 1oc2_A 282 -TDRA-GH-------------DLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN 325 (348)
T ss_dssp -CCCT-TC-------------CCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred -CCCC-Cc-------------ccccccCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence 0000 00 1135789999987 79999998 999999999999875
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=281.44 Aligned_cols=283 Identities=12% Similarity=0.028 Sum_probs=210.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCC------CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWF------PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~------~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
+||++|+++|++ +|++|++++|++..... ...+++ ++.+|++|++++.++++++. +|+|||+|+.
T Consensus 20 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~vih~A~~ 90 (357)
T 1rkx_A 20 FKGGWLSLWLQT------MGATVKGYSLTAPTVPSLFETARVADGMQ-SEIGDIRDQNKLLESIREFQ--PEIVFHMAAQ 90 (357)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSCSSSSCHHHHTTTTTTSE-EEECCTTCHHHHHHHHHHHC--CSEEEECCSC
T ss_pred hHHHHHHHHHHh------CCCeEEEEeCCCcccchhhHhhccCCceE-EEEccccCHHHHHHHHHhcC--CCEEEECCCC
Confidence 589999999999 89999999997643210 135789 99999999999999998864 6999999984
Q ss_pred cC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 75 RL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 75 ~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
.. .++..++++|+.||.+|+++|.+. + +++||||+||.+|||... ...+++|+++.. |
T Consensus 91 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~-~~~~~v~~SS~~vyg~~~-----------~~~~~~E~~~~~--~ 153 (357)
T 1rkx_A 91 PLVRLSYSEPVETYSTNVMGTVYLLEAIRHV---G-GVKAVVNITSDKCYDNKE-----------WIWGYRENEAMG--G 153 (357)
T ss_dssp CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---C-CCCEEEEECCGGGBCCCC-----------SSSCBCTTSCBC--C
T ss_pred cccccchhCHHHHHHHHHHHHHHHHHHHHHh---C-CCCeEEEecCHHHhCCCC-----------cCCCCCCCCCCC--C
Confidence 22 256678899999999999999886 1 389999999999998531 124678888754 4
Q ss_pred CCcHHHHHHHHh-------c---------CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 150 NFYYAVEDIAAS-------Y---------SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 150 ~~~Y~~ek~l~e-------~---------~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
.+.|+.+|...| . ..+++++++||++||||++........ . +...+ ..+.++.+. ++.
T Consensus 154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~-~-~~~~~--~~g~~~~~~-~~~- 227 (357)
T 1rkx_A 154 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVP-D-ILRAF--EQSQPVIIR-NPH- 227 (357)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHH-H-HHHHH--HTTCCEECS-CTT-
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHH-H-HHHHH--hcCCCEEEC-CCC-
Confidence 677999988877 1 128999999999999998632112211 1 11112 135555543 333
Q ss_pred ccccccccCHHHHHHHHHHHHcC----CCCCCCceeccCC--CcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHh
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATT----DRAKNQAFNCTNG--DVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEK 287 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~----~~~~g~~yni~~g--~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~ 287 (360)
..++++|++|+|++++.++.. +...+++|||++| +++|++|+++.+++.+|.+.+.. .+ +.
T Consensus 228 --~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~---~~-~~------- 294 (357)
T 1rkx_A 228 --AIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ---LD-GN------- 294 (357)
T ss_dssp --CEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEE---C-----------
T ss_pred --CeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccc---cC-CC-------
Confidence 567999999999999988763 2345899999985 68999999999999999764311 00 00
Q ss_pred hHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 288 GEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
..+ .. .....+|++|+++ |||+|.++++|+|+++++||++.
T Consensus 295 --------------~~~-~~-------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 336 (357)
T 1rkx_A 295 --------------AHP-HE-------------AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW 336 (357)
T ss_dssp -------------------C-------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred --------------CCC-cC-------------cccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHH
Confidence 000 00 1145789999986 79999999999999999999763
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=276.25 Aligned_cols=263 Identities=12% Similarity=0.110 Sum_probs=204.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
+||++|+++|++ +|++|++++|. .+|++|++++.+++++.+ +|+|||+|+...
T Consensus 16 ~iG~~l~~~L~~------~g~~V~~~~r~---------------~~D~~d~~~~~~~~~~~~--~d~vi~~a~~~~~~~~ 72 (287)
T 3sc6_A 16 QLGKQLQEELNP------EEYDIYPFDKK---------------LLDITNISQVQQVVQEIR--PHIIIHCAAYTKVDQA 72 (287)
T ss_dssp HHHHHHHHHSCT------TTEEEEEECTT---------------TSCTTCHHHHHHHHHHHC--CSEEEECCCCCCHHHH
T ss_pred HHHHHHHHHHHh------CCCEEEEeccc---------------ccCCCCHHHHHHHHHhcC--CCEEEECCcccChHHH
Confidence 489999999998 89999999982 268999999999998643 689999998543
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.++...+++|+.||.+++++|++. ++ ||||+||..+||.. ...|++|+++.. |.+.|+.
T Consensus 73 ~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-~~v~~SS~~vy~~~------------~~~~~~E~~~~~--p~~~Y~~ 132 (287)
T 3sc6_A 73 EKERDLAYVINAIGARNVAVASQLV-----GA-KLVYISTDYVFQGD------------RPEGYDEFHNPA--PINIYGA 132 (287)
T ss_dssp TTCHHHHHHHHTHHHHHHHHHHHHH-----TC-EEEEEEEGGGSCCC------------CSSCBCTTSCCC--CCSHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEchhhhcCCC------------CCCCCCCCCCCC--CCCHHHH
Confidence 367789999999999999999987 56 69999999999853 346899999865 5778999
Q ss_pred HHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIW 232 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~ 232 (360)
+|...| ...+.+++++||++||||+..+.... +...+ ..+.++.+.|+ ...+++|++|+|++++.
T Consensus 133 sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~-----~~~~~--~~~~~~~~~~~-----~~~~~i~v~Dva~~~~~ 200 (287)
T 3sc6_A 133 SKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKT-----MIRLG--KEREEISVVAD-----QIGSPTYVADLNVMINK 200 (287)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHH-----HHHHH--TTCSEEEEECS-----CEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEeeeeecCCCCCcHHHH-----HHHHH--HcCCCeEeecC-----cccCceEHHHHHHHHHH
Confidence 999888 33345899999999999976442221 11111 13566677776 45789999999999999
Q ss_pred HHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccc
Q 037566 233 AATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFE 312 (360)
Q Consensus 233 a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 312 (360)
++..+. +++||+++++.+|++|+++.+++.+|.+... .+.+...+ +.. . .+
T Consensus 201 ~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~----~~~~~~~~---------------~~~--~-~~----- 251 (287)
T 3sc6_A 201 LIHTSL--YGTYHVSNTGSCSWFEFAKKIFSYANMKVNV----LPVSTEEF---------------GAA--A-AR----- 251 (287)
T ss_dssp HHTSCC--CEEEECCCBSCEEHHHHHHHHHHHHTCCCEE----EEECHHHH---------------CCS--S-CC-----
T ss_pred HHhCCC--CCeEEEcCCCcccHHHHHHHHHHHcCCCcce----eeeehhhc---------------Ccc--c-CC-----
Confidence 987654 7899999999999999999999999986442 12222100 100 0 00
Q ss_pred hhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHH
Q 037566 313 ALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 313 ~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
.....+|++|++++||+|.++++|+|+++++|+++
T Consensus 252 --------~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 252 --------PKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp --------CSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred --------CCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence 12457899999988999999999999999999865
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=280.83 Aligned_cols=280 Identities=11% Similarity=0.077 Sum_probs=207.4
Q ss_pred CchHHHHHHHhcCCCCCCC--CcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC--
Q 037566 1 MAGLSLAEALKNNPTIPGG--PWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~--g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-- 76 (360)
+||++|+++|++ + |++|++++|++.... ...+++ ++.+|++|++++.+++++.+ +|+|||+|+...
T Consensus 13 ~iG~~l~~~L~~------~~~g~~V~~~~r~~~~~~-~~~~~~-~~~~D~~d~~~~~~~~~~~~--~d~vih~a~~~~~~ 82 (312)
T 2yy7_A 13 QIGTELTQKLRK------LYGTENVIASDIRKLNTD-VVNSGP-FEVVNALDFNQIEHLVEVHK--ITDIYLMAALLSAT 82 (312)
T ss_dssp HHHHHHHHHHHH------HHCGGGEEEEESCCCSCH-HHHSSC-EEECCTTCHHHHHHHHHHTT--CCEEEECCCCCHHH
T ss_pred HHHHHHHHHHHH------hCCCCEEEEEcCCCcccc-ccCCCc-eEEecCCCHHHHHHHHhhcC--CCEEEECCccCCCc
Confidence 589999999998 8 899999999765421 113678 99999999999999998543 689999998532
Q ss_pred --CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHH
Q 037566 77 --KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYA 154 (360)
Q Consensus 77 --~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~ 154 (360)
.++..++++|+.||.+++++|.+. +++||||+||.++||... ...+.+|+.|.. |.+.|+
T Consensus 83 ~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~e~~~~~--~~~~Y~ 144 (312)
T 2yy7_A 83 AEKNPAFAWDLNMNSLFHVLNLAKAK-----KIKKIFWPSSIAVFGPTT-----------PKENTPQYTIME--PSTVYG 144 (312)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHTT-----SCSEEECCEEGGGCCTTS-----------CSSSBCSSCBCC--CCSHHH
T ss_pred hhhChHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHHhCCCC-----------CCCCccccCcCC--CCchhH
Confidence 356778999999999999999986 789999999999998531 235678888754 477899
Q ss_pred HHHHHHh-------cCCCCcEEEEcCCCeeecCCCC--c-chhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHH
Q 037566 155 VEDIAAS-------YSPAVTYSVHRSSIIIGASSRS--L-NNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSR 224 (360)
Q Consensus 155 ~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~ 224 (360)
.+|...| ...+++++++||++||||+... . .+..... +...+ .+.++..+|++. ..++++|++
T Consensus 145 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~---~~~~~i~v~ 217 (312)
T 2yy7_A 145 ISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDI-FYKAI---ADKKYECFLSSE---TKMPMMYMD 217 (312)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHH-HHHHH---HTSEEEESSCTT---CCEEEEEHH
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHH-HHHHH---cCCCeEEecCCC---ceeeeeeHH
Confidence 9988877 2348999999999999976421 1 1222111 11112 223445556654 457999999
Q ss_pred HHHHHHHHHHcCCCC---CCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCC
Q 037566 225 VLAEQQIWAATTDRA---KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLY 301 (360)
Q Consensus 225 dla~a~~~a~~~~~~---~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (360)
|+|++++.++.++.. .|++|||++ +.+|++|+++.+++.+|.....+ .|. .. . .+
T Consensus 218 Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~~~i~~---~~~-~~-------~---~~------- 275 (312)
T 2yy7_A 218 DAIDATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPEFTITY---EPD-FR-------Q---KI------- 275 (312)
T ss_dssp HHHHHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTTCEEEE---CCC-TH-------H---HH-------
T ss_pred HHHHHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCCCceEe---ccC-cc-------c---cc-------
Confidence 999999999876543 258999986 88999999999999998311111 010 00 0 00
Q ss_pred ccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHH
Q 037566 302 KTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLR 354 (360)
Q Consensus 302 ~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~ 354 (360)
. ..+...+|++|+++ |||+|+++++|+|+++++||+
T Consensus 276 ----~-------------~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 276 ----A-------------DSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp ----H-------------TTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred ----c-------------ccccccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence 0 01235789999987 799999999999999999984
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=286.46 Aligned_cols=293 Identities=12% Similarity=0.054 Sum_probs=210.6
Q ss_pred CchHHHHHHHh-cCCCCCCCCcEEEEEecCCCCC--------C--C--------C---CCC---ceeeEeeccCChHHHH
Q 037566 1 MAGLSLAEALK-NNPTIPGGPWKVYGTARRPPPS--------W--F--------P---SSH---VDHYITFDALDSTDTT 55 (360)
Q Consensus 1 ~iG~~lv~~Ll-~~~~~~~~g~~V~~l~r~~~~~--------~--~--------~---~~~---v~~~v~gDl~d~~~l~ 55 (360)
+||++|+++|+ + +|++|++++|..... . + . ..+ ++ ++.+|++|++++.
T Consensus 13 ~iG~~l~~~L~~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~ 85 (397)
T 1gy8_A 13 YIGSHFVRALLRD------TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAA-LEVGDVRNEDFLN 85 (397)
T ss_dssp HHHHHHHHHHHHH------CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCE-EEESCTTCHHHHH
T ss_pred HHHHHHHHHHHHh------CCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEE-EEECCCCCHHHHH
Confidence 58999999999 8 899999999875431 0 0 0 124 88 9999999999999
Q ss_pred HHHccCCCCccEEEEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccC
Q 037566 56 QKLSSISQEVTHLFWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVG 130 (360)
Q Consensus 56 ~~l~~~~~~v~~V~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g 130 (360)
++++..+. +|+|||+|+... .++..++++|+.||.+|+++|.+. +++||||+||.++||.... +
T Consensus 86 ~~~~~~~~-~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~iv~~SS~~v~g~~~~-----~ 154 (397)
T 1gy8_A 86 GVFTRHGP-IDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-----KCDKIIFSSSAAIFGNPTM-----G 154 (397)
T ss_dssp HHHHHSCC-CCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGTBSCCC------
T ss_pred HHHHhcCC-CCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-----CCCEEEEECCHHHhCCCCc-----c
Confidence 99984321 689999998542 256678999999999999999886 7899999999999985310 0
Q ss_pred CcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc-------chhHHHHHH-H-
Q 037566 131 QLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL-------NNSLLTLAV-Y- 194 (360)
Q Consensus 131 ~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~-------~~~~~~~~~-~- 194 (360)
.......|++|+++.. |.+.|+.+|...| ...+++++++||++||||++... ...+....+ .
T Consensus 155 ~~~~~~~~~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~ 232 (397)
T 1gy8_A 155 SVSTNAEPIDINAKKS--PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRV 232 (397)
T ss_dssp ----CCCCBCTTSCCB--CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHH
T ss_pred cccccccCcCccCCCC--CCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHH
Confidence 0000146789998864 4678999998877 12489999999999999974210 111111111 0
Q ss_pred -HHHHhhcC----------CCeeeeC------CcccccccccccCHHHHHHHHHHHHcCCCCC-----C---CceeccCC
Q 037566 195 -ATICRHQG----------LPFRYLG------NKYTWEHFCDMSDSRVLAEQQIWAATTDRAK-----N---QAFNCTNG 249 (360)
Q Consensus 195 -~~~~~~~~----------~~~~~~G------~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~-----g---~~yni~~g 249 (360)
..+.+... .++.+.| ++. ..+|++|++|+|++++.++..+... + ++|||+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~ 309 (397)
T 1gy8_A 233 MSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGT---CVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS 309 (397)
T ss_dssp HHHHSCC-----------CCCEEEECSCSSSTTSS---CEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS
T ss_pred HHHHHhcCccccccccccCCCceeecCcccCCCCC---eeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCC
Confidence 01111111 2466666 343 5689999999999999888643222 3 89999999
Q ss_pred CcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchh
Q 037566 250 DVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMN 329 (360)
Q Consensus 250 ~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~ 329 (360)
+++|++|+++.|++.+|.+.+.. ..|. .... .....+|++
T Consensus 310 ~~~s~~e~~~~i~~~~g~~~~~~--~~~~----------------------~~~~----------------~~~~~~d~~ 349 (397)
T 1gy8_A 310 RGYSVREVIEVARKTTGHPIPVR--ECGR----------------------REGD----------------PAYLVAASD 349 (397)
T ss_dssp CCEEHHHHHHHHHHHHCCCCCEE--EECC----------------------CTTC----------------CSEECBCCH
T ss_pred CcccHHHHHHHHHHHhCCCCCee--eCCC----------------------CCCc----------------ccccccCHH
Confidence 99999999999999999754311 0000 0000 114578999
Q ss_pred HHHH-cCCCccc-ccHHHHHHHHHHHHHC
Q 037566 330 KSRE-FGFFGFA-DTMKSIRTWVKKLREM 356 (360)
Q Consensus 330 Kar~-lG~~p~~-~~~~~l~~~~~~~~~~ 356 (360)
|+++ |||+|.+ +++|+|+++++||+++
T Consensus 350 k~~~~lG~~p~~~~l~e~l~~~~~~~~~~ 378 (397)
T 1gy8_A 350 KAREVLGWKPKYDTLEAIMETSWKFQRTH 378 (397)
T ss_dssp HHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence 9976 8999999 9999999999999876
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=283.46 Aligned_cols=280 Identities=13% Similarity=0.036 Sum_probs=204.3
Q ss_pred CchHHHHHHHhcCCCCCCCC-cEEEEEecCCCCC--CC-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGGP-WKVYGTARRPPPS--WF-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~--~~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~ 76 (360)
+||++|+++|++ +| ++|++++|++... .+ ...+++ ++.+|++|++++.+++++ +|+|||+|+...
T Consensus 43 ~iG~~l~~~L~~------~g~~~V~~~~r~~~~~~~~l~~~~~v~-~~~~Dl~d~~~l~~~~~~----~d~Vih~A~~~~ 111 (377)
T 2q1s_A 43 FVGSNLVKRLLE------LGVNQVHVVDNLLSAEKINVPDHPAVR-FSETSITDDALLASLQDE----YDYVFHLATYHG 111 (377)
T ss_dssp HHHHHHHHHHHH------TTCSEEEEECCCTTCCGGGSCCCTTEE-EECSCTTCHHHHHHCCSC----CSEEEECCCCSC
T ss_pred HHHHHHHHHHHH------cCCceEEEEECCCCCchhhccCCCceE-EEECCCCCHHHHHHHhhC----CCEEEECCCccC
Confidence 489999999999 89 9999999976432 11 146789 999999999999999886 689999998542
Q ss_pred -----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC--CCC---CCC
Q 037566 77 -----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK--EDS---LRL 146 (360)
Q Consensus 77 -----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~--E~~---p~~ 146 (360)
.++..++++|+.||.+|+++|.+. ++++||||+||.++||.. ...|++ |++ |..
T Consensus 112 ~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~V~~SS~~vyg~~------------~~~~~~~~E~~~~~~~~ 175 (377)
T 2q1s_A 112 NQSSIHDPLADHENNTLTTLKLYERLKHF----KRLKKVVYSAAGCSIAEK------------TFDDAKATEETDIVSLH 175 (377)
T ss_dssp HHHHHHCHHHHHHHHTHHHHHHHHHHTTC----SSCCEEEEEEEC--------------------------CCCCCCCSS
T ss_pred chhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEeCCHHHcCCC------------CCCCcCccccccccccc
Confidence 256778999999999999999763 268999999999999853 234677 887 530
Q ss_pred CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCC---------CCc--chhHHHHHHHHHHHhhcCCCeeee
Q 037566 147 PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASS---------RSL--NNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
.|.+.|+.+|...| ...+++++++||++||||+. ... ........+ ..+ ..+.++.++
T Consensus 176 -~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~--~~g~~~~~~ 251 (377)
T 2q1s_A 176 -NNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFI-YKA--LKGMPLPLE 251 (377)
T ss_dssp -CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHH-HHH--HTTCCCCCS
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHH-HHH--HcCCCeEEe
Confidence 24677999888877 22489999999999999976 210 011111111 112 135566666
Q ss_pred CCcccccccccccCHHHHHHH-HHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHh
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQ-QIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEK 287 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a-~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~ 287 (360)
|++. ...++++++|+|++ ++.++..+. .| +|||++++++|++|+++.+++.+|.+.+.. ..|..
T Consensus 252 g~g~---~~~~~i~v~Dva~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~--~~p~~-------- 316 (377)
T 2q1s_A 252 NGGV---ATRDFIFVEDVANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNTELD--RLPKR-------- 316 (377)
T ss_dssp GGGC---CEECCEEHHHHHHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCC--CCCCC--------
T ss_pred CCCC---eEEeeEEHHHHHHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCCCce--eCCCC--------
Confidence 7765 56799999999999 988887654 56 999999999999999999999999865421 01100
Q ss_pred hHHHHHHHHHhCCCccCcccccccchhhhhhcccc-ccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 288 GEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQF-QHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~-~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
+. . .. ...+|++|+++ |||+|.++++|+|+++++||+++
T Consensus 317 --------------~~---~-------------~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 357 (377)
T 2q1s_A 317 --------------PW---D-------------NSGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN 357 (377)
T ss_dssp --------------GG---G-------------CC-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred --------------cc---c-------------cccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 00 0 11 45789999976 79999999999999999999875
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=281.54 Aligned_cols=302 Identities=15% Similarity=0.050 Sum_probs=213.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CC----------CCCCceeeEeeccCChHHHHHHHccCCCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WF----------PSSHVDHYITFDALDSTDTTQKLSSISQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~----------~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~ 67 (360)
+||++|+++|++ +|++|++++|++... .. ...+++ ++.+|++|++++.++++++. +|+
T Consensus 35 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~ 105 (375)
T 1t2a_A 35 QDGSYLAEFLLE------KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK-LHYGDLTDSTCLVKIINEVK--PTE 105 (375)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCCSSCCCTTTGGGC---------CEE-EEECCTTCHHHHHHHHHHHC--CSE
T ss_pred hHHHHHHHHHHH------CCCEEEEEECCccccchhhHHHHhhhhccccCCCce-EEEccCCCHHHHHHHHHhcC--CCE
Confidence 489999999999 899999999975431 00 124688 99999999999999999864 799
Q ss_pred EEEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCc---cEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 68 LFWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRL---RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 68 V~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v---~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|||+|+... .++...+++|+.||.+|+++|.+. ++ +||||+||.++||.. ...|+
T Consensus 106 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-----~~~~~~~iv~~SS~~~~~~~------------~~~~~ 168 (375)
T 1t2a_A 106 IYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-----GLINSVKFYQASTSELYGKV------------QEIPQ 168 (375)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCTTTCEEEEEEEGGGTCSC------------SSSSB
T ss_pred EEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----CCCccceEEEecchhhhCCC------------CCCCC
Confidence 999998532 256678899999999999999886 56 899999999999853 24578
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+|+++.. |.+.|+.+|...| ...+++++++||+++|||+... ....... .....+.+ ...+....|++
T Consensus 169 ~E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~-~~~~~~~~-g~~~~~~~g~~ 244 (375)
T 1t2a_A 169 KETTPFY--PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKIS-RSVAKIYL-GQLECFSLGNL 244 (375)
T ss_dssp CTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHH-HHHHHHHH-TSCSCEEESCT
T ss_pred CccCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHH-HHHHHHHc-CCCceeEeCCC
Confidence 9998764 4678999998877 2348999999999999997542 2111111 11111111 22333456776
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHH
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIW 291 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (360)
. ..+++++++|+|++++.++..+. +++|||++++++|++|+++.+++.+|.+.+.....+|.++.. .....
T Consensus 245 ~---~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~--~~~~~-- 315 (375)
T 1t2a_A 245 D---AKRDWGHAKDYVEAMWLMLQNDE--PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRC--KETGK-- 315 (375)
T ss_dssp T---CEECCEEHHHHHHHHHHHHHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEE--TTTCC--
T ss_pred C---ceeeeEEHHHHHHHHHHHHhcCC--CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccc--ccccc--
Confidence 5 56799999999999999887643 589999999999999999999999998643100002221110 00000
Q ss_pred HHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 292 DEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
. ...+.+...... + .....+|++|+++ |||+|.++++|+|+++++||++.
T Consensus 316 -~---~~~~~~~~~~~~------~-----~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 366 (375)
T 1t2a_A 316 -V---HVTVDLKYYRPT------E-----VDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVEL 366 (375)
T ss_dssp -E---EEEECGGGSCSS------C-----CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred -c---eeecCcccCCcc------c-----chhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHh
Confidence 0 000000000000 0 1245789999986 79999999999999999999764
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=278.46 Aligned_cols=273 Identities=12% Similarity=0.069 Sum_probs=205.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
+||++|+++|++ +|++|++++|+. .+|++|++++.++++..+ +|+|||+|+...
T Consensus 14 ~iG~~l~~~L~~------~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~~--~d~vih~a~~~~~~~~ 71 (321)
T 1e6u_A 14 MVGSAIRRQLEQ------RGDVELVLRTRD--------------ELNLLDSRAVHDFFASER--IDQVYLAAAKVGGIVA 71 (321)
T ss_dssp HHHHHHHHHHTT------CTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHC--CSEEEECCCCCCCHHH
T ss_pred HHHHHHHHHHHh------CCCeEEEEecCc--------------cCCccCHHHHHHHHHhcC--CCEEEEcCeecCCcch
Confidence 589999999998 899999987642 269999999999998432 689999998543
Q ss_pred --CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC--CCCC-C
Q 037566 77 --KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL--PFPN-F 151 (360)
Q Consensus 77 --~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~--p~p~-~ 151 (360)
.++.+++++|+.||.+++++|.+. +++||||+||..+||.. ...|++|+++.. +.|. +
T Consensus 72 ~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~E~~~~~~~~~p~~~ 134 (321)
T 1e6u_A 72 NNTYPADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSCIYPKL------------AKQPMAESELLQGTLEPTNE 134 (321)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGSCTT------------CCSSBCGGGTTSSCCCGGGH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEccHHHcCCC------------CCCCcCccccccCCCCCCCC
Confidence 256778999999999999999986 78999999999999853 245788887421 2343 5
Q ss_pred cHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc---chhHHHHHHHHHHHh-hcC-CCeeeeCCccccccccc
Q 037566 152 YYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL---NNSLLTLAVYATICR-HQG-LPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 152 ~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~---~~~~~~~~~~~~~~~-~~~-~~~~~~G~~~~~~~~~d 219 (360)
.|+.+|...| ...+++++++||++||||+.... .+.. ...+...... ..| .++.++|++. ..++
T Consensus 135 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~g~---~~~~ 210 (321)
T 1e6u_A 135 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVI-PALLRRFHEATAQKAPDVVVWGSGT---PMRE 210 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHH-HHHHHHHHHHHHHTCSEEEEESCSC---CEEC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccH-HHHHHHHHHhhhcCCCceEEcCCCC---EEEE
Confidence 7999888877 12489999999999999986421 1111 1111111110 123 5666677765 5679
Q ss_pred ccCHHHHHHHHHHHHcCCCCC--------CCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHH
Q 037566 220 MSDSRVLAEQQIWAATTDRAK--------NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIW 291 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~--------g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (360)
++|++|+|++++.++.++... |++|||++++++|++|+++.+++.+|.+..... .+.
T Consensus 211 ~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~------------- 275 (321)
T 1e6u_A 211 FLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF--DAS------------- 275 (321)
T ss_dssp EEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEE--ETT-------------
T ss_pred eEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEe--CCC-------------
Confidence 999999999999998765432 689999999999999999999999997643110 000
Q ss_pred HHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHC
Q 037566 292 DEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.+.. .....+|++|+++|||+|+++++|+|+++++||+++
T Consensus 276 -----------~~~~--------------~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~ 315 (321)
T 1e6u_A 276 -----------KPDG--------------TPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN 315 (321)
T ss_dssp -----------SCCC--------------CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred -----------CCCC--------------cccccCCHHHHHhcCCccCCcHHHHHHHHHHHHHHH
Confidence 0000 114578999998899999999999999999999875
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=277.91 Aligned_cols=266 Identities=12% Similarity=0.066 Sum_probs=204.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCC----C-C----CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPP----S-W----FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~----~-~----~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ +|++|++++|++.. . . ....+++ ++.+|++ + +|+|||+
T Consensus 18 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~----------~----~d~vi~~ 76 (321)
T 3vps_A 18 FIGGHLARALVA------SGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLE-LEERDLS----------D----VRLVYHL 76 (321)
T ss_dssp HHHHHHHHHHHH------TTCCEEEECCCSSCCSSCCTTSSEEECSCGGG-CCHHHHT----------T----EEEEEEC
T ss_pred hHHHHHHHHHHH------CCCEEEEEecCCcccccchhhhhhhccCCCee-EEeCccc----------c----CCEEEEC
Confidence 589999999999 89999999997651 1 0 1124677 7888876 3 7999999
Q ss_pred eeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 72 MFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 72 A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
|+... .++...++ |+.||.|++++|.+. +++||||+||..+||.. ...|++|+++..
T Consensus 77 a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-----~v~~~v~~SS~~v~~~~------------~~~~~~E~~~~~ 138 (321)
T 3vps_A 77 ASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-----GVPKVVVGSTCEVYGQA------------DTLPTPEDSPLS 138 (321)
T ss_dssp CCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSC------------SSSSBCTTSCCC
T ss_pred CccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-----CCCeEEEecCHHHhCCC------------CCCCCCCCCCCC
Confidence 98532 35556777 999999999999987 79999999999999853 346789999865
Q ss_pred CCCCCcHHHHHHHHh-------cCCCC-cEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 147 PFPNFYYAVEDIAAS-------YSPAV-TYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-------~~~~~-~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
|.+.|+.+|...| ...++ +++++||++||||+.... ... ...+. .+. .+.++.++|++. ..+
T Consensus 139 --p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~-~~~~~-~~~--~~~~~~~~~~~~---~~~ 208 (321)
T 3vps_A 139 --PRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD-ALV-PRLCA-NLL--TRNELPVEGDGE---QRR 208 (321)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT-SHH-HHHHH-HHH--HHSEEEEETTSC---CEE
T ss_pred --CCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC-ChH-HHHHH-HHH--cCCCeEEeCCCC---ceE
Confidence 4778999888777 34688 999999999999986431 111 11111 111 345667778776 567
Q ss_pred cccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHh
Q 037566 219 DMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKH 298 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (360)
++++++|+|++++.++..+.. | +|||++|+.+|+.|+++.++ .+|.+.+.. ..|..
T Consensus 209 ~~v~v~Dva~~~~~~~~~~~~-g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~--~~~~~------------------- 264 (321)
T 3vps_A 209 DFTYITDVVDKLVALANRPLP-S-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVA--RKQPR------------------- 264 (321)
T ss_dssp CEEEHHHHHHHHHHGGGSCCC-S-EEEESCSCCEEHHHHHHHHH-TTCTTCEEE--EECCC-------------------
T ss_pred ceEEHHHHHHHHHHHHhcCCC-C-eEEecCCCcccHHHHHHHHH-HhCCCCccc--cCCCC-------------------
Confidence 999999999999998876544 7 99999999999999999999 999765421 00100
Q ss_pred CCCccCcccccccchhhhhhccccccccchhHHHH-cCCCc-ccccHHHHHHHHHHHHHCCC
Q 037566 299 GLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFG-FADTMKSIRTWVKKLREMKI 358 (360)
Q Consensus 299 ~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p-~~~~~~~l~~~~~~~~~~g~ 358 (360)
. .. ..+..+|++|+++ |||+| .++++|+|+++++||+++++
T Consensus 265 -----~-~~-------------~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~ 307 (321)
T 3vps_A 265 -----P-NE-------------ITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDL 307 (321)
T ss_dssp -----T-TC-------------CSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred -----C-CC-------------cceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence 0 00 1256889999987 79999 99999999999999999875
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-35 Score=278.98 Aligned_cols=308 Identities=15% Similarity=0.078 Sum_probs=209.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CC---------CCCCceeeEeeccCChHHHHHHHccCCCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WF---------PSSHVDHYITFDALDSTDTTQKLSSISQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~---------~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V 68 (360)
+||++|+++|++ +|++|++++|++... .+ ...+++ ++.+|++|++++.+++++++ +|+|
T Consensus 12 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~v 82 (372)
T 1db3_A 12 QDGSYLAEFLLE------KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFH-LHYGDLSDTSNLTRILREVQ--PDEV 82 (372)
T ss_dssp HHHHHHHHHHHH------TTCEEEEECC---------------------CCEE-ECCCCSSCHHHHHHHHHHHC--CSEE
T ss_pred hHHHHHHHHHHH------CCCEEEEEECCCcccchHHHHHHhhccccCCCceE-EEECCCCCHHHHHHHHHhcC--CCEE
Confidence 589999999999 899999999975421 00 024788 99999999999999998864 6999
Q ss_pred EEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCc---cEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 69 FWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRL---RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 69 ~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v---~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
||+|+... .++...+++|+.||.+++++|.+. ++ ++||++||.++||.. ...|++
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~~iv~~SS~~v~g~~------------~~~~~~ 145 (372)
T 1db3_A 83 YNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-----GLEKKTRFYQASTSELYGLV------------QEIPQK 145 (372)
T ss_dssp EECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-----TCTTTCEEEEEEEGGGGTTC------------CSSSBC
T ss_pred EECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-----CCCCCcEEEEeCChhhhCCC------------CCCCCC
Confidence 99998532 245678899999999999999886 56 799999999999853 235789
Q ss_pred CCCCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcCC-CeeeeCCc
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGL-PFRYLGNK 211 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~G~~ 211 (360)
|+++.. |.+.|+.+|...| ...+++++++||+++|||+... ........ +...+ ..|. +..+.|++
T Consensus 146 E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~-~~~~~--~~g~~~~~~~g~~ 220 (372)
T 1db3_A 146 ETTPFY--PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITR-AIANI--AQGLESCLYLGNM 220 (372)
T ss_dssp TTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHH-HHHHH--HTTSCCCEEESCT
T ss_pred ccCCCC--CCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHH-HHHHH--HcCCCCceeecCC
Confidence 998764 4678999998877 2348999999999999997643 21111111 11111 1243 34456776
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCC-HHHHHHHhhHH
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFD-AVEMMKEKGEI 290 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~-~~~~~~~~~~~ 290 (360)
. ..+|++|++|+|++++.++..+. +++|||++++++|++|+++.+++.+|.+.+......|.+ +...+. ..+.
T Consensus 221 ~---~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~-~~~~ 294 (372)
T 1db3_A 221 D---SLRDWGHAKDYVKMQWMMLQQEQ--PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVT-GHDA 294 (372)
T ss_dssp T---CEECCEEHHHHHHHHHHTTSSSS--CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEEC-SSSC
T ss_pred C---ceeeeeEHHHHHHHHHHHHhcCC--CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccc-cccc
Confidence 5 56799999999999998876543 589999999999999999999999997543100001100 000000 0000
Q ss_pred HH-HHHHH-hCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 291 WD-EIVEK-HGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 291 ~~-~~~~~-~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
+. .+... ..+.+...... + .....+|++|+++ |||+|.++++|+|+++++||++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~------~-----~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 352 (372)
T 1db3_A 295 PGVKPGDVIIAVDPRYFRPA------E-----VETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA 352 (372)
T ss_dssp TTCCTTCEEEEECGGGCCCC------C------CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred cccccccceeeccccccCCC------c-----hhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence 00 00000 00000000000 0 1245789999976 89999999999999999999763
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-35 Score=277.01 Aligned_cols=295 Identities=13% Similarity=0.101 Sum_probs=210.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
+||++|+++|++ +|++|++++|..... .+ ...+++ ++.+|++|++++.+++++.. +|+|||+|+
T Consensus 12 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~vih~A~ 82 (347)
T 1orr_A 12 FLGSNLASFALS------QGIDLIVFDNLSRKGATDNLHWLSSLGNFE-FVHGDIRNKNDVTRLITKYM--PDSCFHLAG 82 (347)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCCSTTHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHHHC--CSEEEECCC
T ss_pred hhHHHHHHHHHh------CCCEEEEEeCCCccCchhhhhhhccCCceE-EEEcCCCCHHHHHHHHhccC--CCEEEECCc
Confidence 589999999999 899999999853211 00 123588 99999999999999998843 589999998
Q ss_pred ecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCcc-EEEEeccCccccccccCCcccC--Cc--CCCCCCCCCCC
Q 037566 74 QRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLR-HVTLLMGTKHYMGPVFDPSLVG--QL--IGHDPPFKEDS 143 (360)
Q Consensus 74 ~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~-r~v~~SS~~vYg~~~~~~~~~g--~~--~~~~~p~~E~~ 143 (360)
... .++..++++|+.||.||+++|.+. +++ ||||+||.++||.....+..-. .+ .....+++|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~ 157 (347)
T 1orr_A 83 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST 157 (347)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred ccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccC
Confidence 532 256778999999999999999987 565 9999999999985310000000 00 00012367777
Q ss_pred CCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcc-hhHHHHHHHHHHHhhcCC----CeeeeCCc
Q 037566 144 LRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLN-NSLLTLAVYATICRHQGL----PFRYLGNK 211 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~G~~ 211 (360)
+.. |.+.|+.+|...| ...+++++++||++||||+..... .......+...+ + ... ++...|++
T Consensus 158 ~~~--~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~g~g 233 (347)
T 1orr_A 158 QLD--FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAV-E-IKNGINKPFTISGNG 233 (347)
T ss_dssp CCC--CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHH-H-HHTTCCCCEEEESSS
T ss_pred CCC--CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHH-h-CcccCCCCeEEecCC
Confidence 653 4677999998877 224899999999999999763211 111111111111 1 111 56667877
Q ss_pred ccccccccccCHHHHHHHHHHHHcC-CCCCCCceeccCCC--cccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhh
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATT-DRAKNQAFNCTNGD--VFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKG 288 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~-~~~~g~~yni~~g~--~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~ 288 (360)
. ..+++++++|+|++++.++.. +...|++|||++|. ++|++|+++.+++.+|.+.+.. ..|.
T Consensus 234 ~---~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~---------- 298 (347)
T 1orr_A 234 K---QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFT--NLPV---------- 298 (347)
T ss_dssp C---CEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEE--EECC----------
T ss_pred c---ceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCce--eCCC----------
Confidence 6 567999999999999998864 23468999999987 4999999999999999764321 0110
Q ss_pred HHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 289 EIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.. .. .....+|++|+++ |||+|.++++|+|+++++||++.
T Consensus 299 --------------~~-~~-------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 339 (347)
T 1orr_A 299 --------------RE-SD-------------QRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI 339 (347)
T ss_dssp --------------CS-SC-------------CSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred --------------CC-CC-------------cceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHH
Confidence 00 00 1135789999976 79999999999999999999874
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=274.45 Aligned_cols=275 Identities=10% Similarity=0.103 Sum_probs=206.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
+||++|+++|++ |++|++++|++ + ++.+|++|++++.+++++.+ +|+|||+|+...
T Consensus 11 ~iG~~l~~~L~~-------g~~V~~~~r~~----------~-~~~~D~~d~~~~~~~~~~~~--~d~vih~a~~~~~~~~ 70 (299)
T 1n2s_A 11 QVGWELQRSLAP-------VGNLIALDVHS----------K-EFCGDFSNPKGVAETVRKLR--PDVIVNAAAHTAVDKA 70 (299)
T ss_dssp HHHHHHHHHTTT-------TSEEEEECTTC----------S-SSCCCTTCHHHHHHHHHHHC--CSEEEECCCCCCHHHH
T ss_pred HHHHHHHHHhhc-------CCeEEEecccc----------c-cccccCCCHHHHHHHHHhcC--CCEEEECcccCCHhhh
Confidence 589999999984 89999999864 3 67899999999999998753 689999998532
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.++.+.+++|+.||.|++++|++. ++ ||||+||.++||.. ...|++|+++.. |.+.|+.
T Consensus 71 ~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~vy~~~------------~~~~~~E~~~~~--p~~~Y~~ 130 (299)
T 1n2s_A 71 ESEPELAQLLNATSVEAIAKAANET-----GA-WVVHYSTDYVFPGT------------GDIPWQETDATS--PLNVYGK 130 (299)
T ss_dssp TTCHHHHHHHHTHHHHHHHHHHTTT-----TC-EEEEEEEGGGSCCC------------TTCCBCTTSCCC--CSSHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHc-----CC-cEEEEecccEEeCC------------CCCCCCCCCCCC--CccHHHH
Confidence 367788999999999999999886 56 79999999999853 245789998864 4678999
Q ss_pred HHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIW 232 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~ 232 (360)
+|...| .....+++++||++||||+..+.... +...+. .+.++...|+ ...++++++|+|++++.
T Consensus 131 sK~~~E~~~~~~~~~~~ilRp~~v~G~~~~~~~~~-----~~~~~~--~~~~~~~~~~-----~~~~~i~v~Dva~~~~~ 198 (299)
T 1n2s_A 131 TKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKT-----MLRLAK--ERQTLSVIND-----QYGAPTGAELLADCTAH 198 (299)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHH-----HHHHHH--HCSEEEEECS-----CEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEeeeeecCCCcCcHHHH-----HHHHHh--cCCCEEeecC-----cccCCeeHHHHHHHHHH
Confidence 999888 23345899999999999976432211 111121 3556666665 45789999999999998
Q ss_pred HHcCC--CC-CCCceeccCCCcccHHHHHHHHHHHhCCCccCCC--cCCCCCHHHHHHHhhHHHHHHHHHhCCCccCccc
Q 037566 233 AATTD--RA-KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFD--EKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEE 307 (360)
Q Consensus 233 a~~~~--~~-~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 307 (360)
++.++ .. .|++||+++|+++|++|+++.+++.+|.+.+... .-.+.+. . .++ ... .
T Consensus 199 ~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~--------~-------~~~--~~~-~- 259 (299)
T 1n2s_A 199 AIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPT--------S-------AYP--TPA-S- 259 (299)
T ss_dssp HHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECS--------T-------TSC--CSS-C-
T ss_pred HHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCcccccccccccccc--------c-------ccc--CcC-C-
Confidence 88754 22 4899999999999999999999999997643110 0000000 0 000 000 0
Q ss_pred ccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCCCC
Q 037566 308 ITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 308 ~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g~i 359 (360)
......+|++|+++ |||+|. +++|+|+++++||++++.|
T Consensus 260 ------------~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~~~~i 299 (299)
T 1n2s_A 260 ------------RPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTTTTI 299 (299)
T ss_dssp ------------CCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSCCC-
T ss_pred ------------CCCceeeeHHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCC
Confidence 01256899999987 799998 8999999999999988764
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=277.84 Aligned_cols=283 Identities=13% Similarity=0.085 Sum_probs=210.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCC---------CC-CceeeEeeccCChHHHHHHHccCCCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFP---------SS-HVDHYITFDALDSTDTTQKLSSISQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~---------~~-~v~~~v~gDl~d~~~l~~~l~~~~~~v~~ 67 (360)
+||++|+++|++ +|++|++++|++... ... .. +++ ++.+|++|++++.+++++++ +|+
T Consensus 39 ~IG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~ 109 (381)
T 1n7h_A 39 QDGSYLTEFLLG------KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMK-LHYADLTDASSLRRWIDVIK--PDE 109 (381)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCCSSCCCTTTTTTC--------CCEE-EEECCTTCHHHHHHHHHHHC--CSE
T ss_pred hHHHHHHHHHHH------CCCEEEEEecCCccccchhhhhhhhccccccccceE-EEECCCCCHHHHHHHHHhcC--CCE
Confidence 589999999999 899999999976431 010 12 788 99999999999999999864 799
Q ss_pred EEEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCcc-----EEEEeccCccccccccCCcccCCcCCCCC
Q 037566 68 LFWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLR-----HVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 68 V~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~-----r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|||+|+... .++..++++|+.||.+|+++|.+. +++ ||||+||.++||.. ..
T Consensus 110 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~~~~~~~~~~v~~SS~~vyg~~------------~~- 171 (381)
T 1n7h_A 110 VYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-----TIDSGRTVKYYQAGSSEMFGST------------PP- 171 (381)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-----HHHHCCCCEEEEEEEGGGGTTS------------CS-
T ss_pred EEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-----CCccCCccEEEEeCcHHHhCCC------------CC-
Confidence 999998533 356778899999999999999986 566 99999999999853 23
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcCC-Ceeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGL-PFRYL 208 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~ 208 (360)
|++|+++.. |.+.|+.+|...| ...+++++++|++++|||+... ....... .....+. .+. +....
T Consensus 172 ~~~E~~~~~--~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~-~~~~~~~--~g~~~~~~~ 246 (381)
T 1n7h_A 172 PQSETTPFH--PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKIT-RALGRIK--VGLQTKLFL 246 (381)
T ss_dssp SBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHH-HHHHHHH--HTSCCCEEE
T ss_pred CCCCCCCCC--CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHH-HHHHHHH--cCCCCeEEe
Confidence 789998754 4678999998877 2348999999999999998643 2111111 1111111 233 33345
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhh
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKG 288 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~ 288 (360)
|++. ...++++++|+|++++.++..+. +++|||++|+++|++|+++.+++.+|.+.... .++.
T Consensus 247 g~~~---~~~~~v~v~Dva~a~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~--------- 309 (381)
T 1n7h_A 247 GNLQ---ASRDWGFAGDYVEAMWLMLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDY---VEID--------- 309 (381)
T ss_dssp SCTT---CEEECEEHHHHHHHHHHHHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGT---EEEC---------
T ss_pred CCCC---ceeeeEEHHHHHHHHHHHHhCCC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccc---cccC---------
Confidence 7665 55789999999999999887543 58999999999999999999999999753210 0000
Q ss_pred HHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 289 EIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
+...... + .....+|++|+++ |||+|+++++|+|+++++||++.
T Consensus 310 -------------~~~~~~~------~-----~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 354 (381)
T 1n7h_A 310 -------------QRYFRPA------E-----VDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL 354 (381)
T ss_dssp -------------GGGSCSS------C-----CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred -------------cccCCcc------c-----cccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhh
Confidence 0000000 0 1135789999987 79999999999999999999763
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=277.69 Aligned_cols=299 Identities=13% Similarity=0.054 Sum_probs=213.6
Q ss_pred CchHHHHHHHhcCCCCCCC-CcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGG-PWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+||++|+++|++ + |++|++++|.+... .....+++ ++.+|++|++++.++++..+ +|+|||+|
T Consensus 11 ~iG~~l~~~L~~------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~vih~A 81 (361)
T 1kew_A 11 FIGSAVVRHIIK------NTQDTVVNIDKLTYAGNLESLSDISESNRYN-FEHADICDSAEITRIFEQYQ--PDAVMHLA 81 (361)
T ss_dssp HHHHHHHHHHHH------HCSCEEEEEECCCTTCCGGGGTTTTTCTTEE-EEECCTTCHHHHHHHHHHHC--CSEEEECC
T ss_pred hHhHHHHHHHHh------cCCCeEEEEecCCCCCchhhhhhhhcCCCeE-EEECCCCCHHHHHHHHhhcC--CCEEEECC
Confidence 589999999998 6 79999999865211 01134788 99999999999999998322 68999999
Q ss_pred eecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCcc-------EEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 73 FQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLR-------HVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 73 ~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~-------r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+... .+++.++++|+.||.+++++|.+.+ .+++ ||||+||.++||..... ..... .....+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~---~~v~~~~~~~~~iv~~SS~~v~g~~~~~-~~~~~-~~~~~~~~ 156 (361)
T 1kew_A 82 AESHVDRSITGPAAFIETNIVGTYALLEVARKYW---SALGEDKKNNFRFHHISTDEVYGDLPHP-DEVEN-SVTLPLFT 156 (361)
T ss_dssp SCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHH---HTSCHHHHHHCEEEEEEEGGGGCCCCCG-GGSCT-TSCCCCBC
T ss_pred CCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhc---cCcccccccCceEEEeCCHHHhCCCccc-ccccc-cccCCCCC
Confidence 8543 2566789999999999999998752 1466 99999999999852100 00000 00112788
Q ss_pred CCCCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
|++|.. |.+.|+.+|...| ...+++++++||++||||+.... ... .. +...+ ..+.++++.|++.
T Consensus 157 E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~-~~-~~~~~--~~~~~~~~~~~~~- 228 (361)
T 1kew_A 157 ETTAYA--PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLI-PL-VILNA--LEGKPLPIYGKGD- 228 (361)
T ss_dssp TTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHH-HH-HHHHH--HHTCCEEEETTSC-
T ss_pred CCCCCC--CCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHH-HH-HHHHH--HcCCCceEcCCCc-
Confidence 988754 4678999998877 22489999999999999986321 111 11 11111 1355667777765
Q ss_pred ccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHH
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDE 293 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (360)
...++++++|+|++++.++..+ ..|++|||++|+++|+.|+++.+++.+|.+.+.. .| +...+
T Consensus 229 --~~~~~i~v~Dva~a~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~---~p--~~~~~--------- 291 (361)
T 1kew_A 229 --QIRDWLYVEDHARALHMVVTEG-KAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKA---TS--YREQI--------- 291 (361)
T ss_dssp --CEEEEEEHHHHHHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCS---SC--GGGGE---------
T ss_pred --eeEeeEEHHHHHHHHHHHHhCC-CCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccc---cc--cccce---------
Confidence 5578999999999999988654 4689999999999999999999999999765432 11 10000
Q ss_pred HHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 294 IVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 294 ~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
...+.... ......+|++|+++ |||+|.++++|+|+++++||+++
T Consensus 292 -----~~~~~~~~-------------~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 292 -----TYVADRPG-------------HDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp -----EEECCCTT-------------CCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred -----eecCCCCc-------------ccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence 00000000 01245789999987 79999999999999999999875
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-36 Score=277.77 Aligned_cols=281 Identities=11% Similarity=0.087 Sum_probs=192.5
Q ss_pred CchHHHHHHHhcCCCCCCCC-cEEEEEecCCCCCCC-CCCCceeeEeeccCChHHHHHHHccC---CCCccEEEEeeeec
Q 037566 1 MAGLSLAEALKNNPTIPGGP-WKVYGTARRPPPSWF-PSSHVDHYITFDALDSTDTTQKLSSI---SQEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~~~-~~~~v~~~v~gDl~d~~~l~~~l~~~---~~~v~~V~h~A~~~ 75 (360)
+||++|+++|++ +| ++|++++|.+..... ...+++ +.+|++|.+.+.+++++. + +|+|||+|+..
T Consensus 10 ~iG~~l~~~L~~------~g~~~V~~~~r~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~--~d~vi~~a~~~ 79 (310)
T 1eq2_A 10 FIGSNIVKALND------KGITDILVVDNLKDGTKFVNLVDLN--IADYMDKEDFLIQIMAGEEFGD--VEAIFHEGACS 79 (310)
T ss_dssp HHHHHHHHHHHT------TTCCCEEEEECCSSGGGGHHHHTSC--CSEEEEHHHHHHHHHTTCCCSS--CCEEEECCSCC
T ss_pred HHHHHHHHHHHH------CCCcEEEEEccCCCCchhhhcCcce--eccccccHHHHHHHHhccccCC--CcEEEECcccc
Confidence 589999999999 89 999999987543100 001223 679999999999998862 2 68999999854
Q ss_pred C---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCc
Q 037566 76 L---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFY 152 (360)
Q Consensus 76 ~---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~ 152 (360)
. .+++.++++|+.||.+++++|.+. ++ ||||+||.++||.. ...+++|+++.. |.+.
T Consensus 80 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~g~~------------~~~~~~E~~~~~--p~~~ 139 (310)
T 1eq2_A 80 STTEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGR------------TSDFIESREYEK--PLNV 139 (310)
T ss_dssp CTTCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGGGGTTC------------CSCBCSSGGGCC--CSSH
T ss_pred cCcccCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeeHHHhCCC------------CCCCCCCCCCCC--CCCh
Confidence 3 367788999999999999999987 67 99999999999853 234788988754 4677
Q ss_pred HHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc--chhHHHHHHHHHHHhhcCCCeeeeCCcccccc-cccccC
Q 037566 153 YAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL--NNSLLTLAVYATICRHQGLPFRYLGNKYTWEH-FCDMSD 222 (360)
Q Consensus 153 Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~d~~~ 222 (360)
|+.+|...| ...+++++++||++||||++... ....... +...+ ..+.++.+.|++. . .+++++
T Consensus 140 Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~g~---~~~~~~i~ 213 (310)
T 1eq2_A 140 YGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFH-LNTQL--NNGESPKLFEGSE---NFKRDFVY 213 (310)
T ss_dssp HHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHH-HHHHH--HC----------------CBCEEE
T ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHH-HHHHH--HcCCCcEEecCCC---cceEccEE
Confidence 999888877 24589999999999999986311 1111111 11112 1355555567665 4 679999
Q ss_pred HHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCc
Q 037566 223 SRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYK 302 (360)
Q Consensus 223 v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 302 (360)
++|+|++++.++..+. |++||+++|+++|++|+++.+++.+|.+ . +. ..+.+. .+ .
T Consensus 214 v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~-~~-~~~~~~--~~----------~------- 269 (310)
T 1eq2_A 214 VGDVADVNLWFLENGV--SGIFNLGTGRAESFQAVADATLAYHKKG-Q-IE-YIPFPD--KL----------K------- 269 (310)
T ss_dssp HHHHHHHHHHHHHHCC--CEEEEESCSCCBCHHHHHHHC-----------------------------------------
T ss_pred HHHHHHHHHHHHhcCC--CCeEEEeCCCccCHHHHHHHHHHHcCCC-C-ce-eCCCCh--hh----------h-------
Confidence 9999999999887654 8999999999999999999999999976 2 10 011110 00 0
Q ss_pred cCcccccccchhhhhhccccccccchhHHHHcCC-CcccccHHHHHHHHHHHHHC
Q 037566 303 TKMEEITCFEALNTVLHLQFQHVSSMNKSREFGF-FGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 303 ~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~-~p~~~~~~~l~~~~~~~~~~ 356 (360)
... .....+|++|++++|| .|.++++|+|+++++||+++
T Consensus 270 ~~~---------------~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 270 GRY---------------QAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD 309 (310)
T ss_dssp --C---------------CCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHTC--
T ss_pred ccc---------------ccccccchHHHHhcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 000 1135779999999999 79999999999999999764
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=270.57 Aligned_cols=301 Identities=13% Similarity=0.082 Sum_probs=213.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
+||++|+++|++ +|++|++++|++.... ....+++ ++.+|++|++++.+++++++ +|+|||+|+
T Consensus 14 ~iG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~vih~A~ 84 (345)
T 2z1m_A 14 QDGAYLAKLLLE------KGYEVYGADRRSGEFASWRLKELGIENDVK-IIHMDLLEFSNIIRTIEKVQ--PDEVYNLAA 84 (345)
T ss_dssp HHHHHHHHHHHH------TTCEEEEECSCCSTTTTHHHHHTTCTTTEE-ECCCCTTCHHHHHHHHHHHC--CSEEEECCC
T ss_pred hHHHHHHHHHHH------CCCEEEEEECCCcccccccHhhccccCcee-EEECCCCCHHHHHHHHHhcC--CCEEEECCC
Confidence 589999999999 8999999999865321 0124688 99999999999999999864 799999998
Q ss_pred ec-----CCChhHhhhhhHHHHHHHHHHHHhhccCCCCc-cEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 74 QR-----LKSEEINISNNSTMFKNVMSVVVDSNKGRSRL-RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 74 ~~-----~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v-~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
.. ..+++.++++|+.||.+++++|.+. ++ +|||++||.++||.. ...|++|+.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-----~~~~~iv~~SS~~vyg~~------------~~~~~~e~~~~~- 146 (345)
T 2z1m_A 85 QSFVGVSFEQPILTAEVDAIGVLRILEALRTV-----KPDTKFYQASTSEMFGKV------------QEIPQTEKTPFY- 146 (345)
T ss_dssp CCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-----CTTCEEEEEEEGGGGCSC------------SSSSBCTTSCCC-
T ss_pred CcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCceEEEEechhhcCCC------------CCCCCCccCCCC-
Confidence 53 2356788999999999999999986 56 899999999999853 245788988754
Q ss_pred CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcCC-CeeeeCCcccccccc
Q 037566 148 FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGL-PFRYLGNKYTWEHFC 218 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~~~ 218 (360)
|.+.|+.+|...| ...+++++++|++++|||+... .+..... .....+. .+. +..+.|++. ..+
T Consensus 147 -~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~---~~~ 219 (345)
T 2z1m_A 147 -PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKIT-YSLARIK--YGLQDKLVLGNLN---AKR 219 (345)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH-HHHHHHH--TTSCSCEEESCTT---CEE
T ss_pred -CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHH-HHHHHHH--cCCCCeeeeCCCC---cee
Confidence 4677999998877 2347999999999999998642 2211111 0111111 232 333456654 457
Q ss_pred cccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHh
Q 037566 219 DMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKH 298 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (360)
++++++|+|+++++++..+. +++|||++|+++|++|+++.+++.+|.+.+......|..+.. ..... .+ .
T Consensus 220 ~~~~v~Dva~a~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~--~~~~~---~~---~ 289 (345)
T 2z1m_A 220 DWGYAPEYVEAMWLMMQQPE--PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGID--RNTGK---VI---V 289 (345)
T ss_dssp CCEEHHHHHHHHHHHHTSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEE--TTTCC---EE---E
T ss_pred eeEEHHHHHHHHHHHHhCCC--CceEEEeCCCCccHHHHHHHHHHHhCCCcccccccccccccc--ccccc---cc---c
Confidence 89999999999999886543 589999999999999999999999998643100001211100 00000 00 0
Q ss_pred CCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 299 GLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 299 ~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
...+...... ......+|++|+++ |||+|+++++|+|+++++||++.
T Consensus 290 ~~~~~~~~~~-----------~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 337 (345)
T 2z1m_A 290 EVSEEFFRPA-----------EVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKR 337 (345)
T ss_dssp EECGGGSCSS-----------CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred ccCcccCCCC-----------CcceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence 0000000000 01245789999976 79999999999999999999763
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-35 Score=280.76 Aligned_cols=282 Identities=13% Similarity=0.076 Sum_probs=207.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------------------C------CCCCCceeeEeeccCChHHHHH
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------------------W------FPSSHVDHYITFDALDSTDTTQ 56 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------------------~------~~~~~v~~~v~gDl~d~~~l~~ 56 (360)
|||++|+++|++ +|++|++++|..... . ....+++ ++.+|++|++++.+
T Consensus 22 fIG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~-~~~~Dl~d~~~~~~ 94 (404)
T 1i24_A 22 YCGWATALHLSK------KNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIE-LYVGDICDFEFLAE 94 (404)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCE-EEESCTTSHHHHHH
T ss_pred HHHHHHHHHHHh------CCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceE-EEECCCCCHHHHHH
Confidence 589999999999 899999998753210 0 0124788 99999999999999
Q ss_pred HHccCCCCccEEEEeeeecC-----CChh---HhhhhhHHHHHHHHHHHHhhccCCCCc-cEEEEeccCccccccccCCc
Q 037566 57 KLSSISQEVTHLFWVMFQRL-----KSEE---INISNNSTMFKNVMSVVVDSNKGRSRL-RHVTLLMGTKHYMGPVFDPS 127 (360)
Q Consensus 57 ~l~~~~~~v~~V~h~A~~~~-----~~~~---~~~~vNv~gt~nll~a~~~~~~~~~~v-~r~v~~SS~~vYg~~~~~~~ 127 (360)
++++++ +|+|||+|+... .+++ .++++|+.||.|++++|.+. ++ +||||+||.++||..
T Consensus 95 ~~~~~~--~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~~~~V~~SS~~vyg~~----- 162 (404)
T 1i24_A 95 SFKSFE--PDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-----GEECHLVKLGTMGEYGTP----- 162 (404)
T ss_dssp HHHHHC--CSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-----CTTCEEEEECCGGGGCCC-----
T ss_pred HHhccC--CCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-----CCCcEEEEeCcHHHhCCC-----
Confidence 998854 689999998532 1332 37799999999999999987 55 599999999999852
Q ss_pred ccCCcCCCCCCCCCC--------------CCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc--
Q 037566 128 LVGQLIGHDPPFKED--------------SLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL-- 184 (360)
Q Consensus 128 ~~g~~~~~~~p~~E~--------------~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~-- 184 (360)
..+++|+ .+. .|.+.|+.+|...| ...+++++++||++||||++...
T Consensus 163 --------~~~~~E~~~~~~~~~~~~~~~~~~--~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~ 232 (404)
T 1i24_A 163 --------NIDIEEGYITITHNGRTDTLPYPK--QASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEM 232 (404)
T ss_dssp --------SSCBCSSEEEEEETTEEEEEECCC--CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGG
T ss_pred --------CCCCCccccccccccccccccCCC--CCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccc
Confidence 2356665 232 35678999998876 22489999999999999986310
Q ss_pred -------------chhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCCCCC--CceeccCC
Q 037566 185 -------------NNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKN--QAFNCTNG 249 (360)
Q Consensus 185 -------------~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g--~~yni~~g 249 (360)
+.......+. .+ ..+.++.+.|++. ..+|++|++|+|++++.++..+...| ++|||++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~g~~~~~~g~g~---~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~- 305 (404)
T 1i24_A 233 HEELRNRLDYDAVFGTALNRFCV-QA--AVGHPLTVYGKGG---QTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT- 305 (404)
T ss_dssp SGGGCCCCCCSTTTCCHHHHHHH-HH--HHTCCEEEETTSC---CEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-
T ss_pred ccccccccccccchhhHHHHHHH-HH--HcCCeeEEeCCCC---ceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-
Confidence 0111111111 12 1356766778765 56799999999999999987765556 7999998
Q ss_pred CcccHHHHHHHHHHH---hCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhcccccccc
Q 037566 250 DVFTWKSLWKLLSEI---FDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVS 326 (360)
Q Consensus 250 ~~~s~~el~~~ia~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~ 326 (360)
+++|++|+++.+++. +|.+.+.. ..|.+. ... ......+
T Consensus 306 ~~~s~~e~~~~i~~~~~~~g~~~~~~--~~p~~~----------------------~~~--------------~~~~~~~ 347 (404)
T 1i24_A 306 EQFSVNELASLVTKAGSKLGLDVKKM--TVPNPR----------------------VEA--------------EEHYYNA 347 (404)
T ss_dssp EEEEHHHHHHHHHHHHHTTTCCCCEE--EECCSS----------------------CSC--------------SSCCCCB
T ss_pred CCCcHHHHHHHHHHHHHhhCCCcccc--ccCccc----------------------Ccc--------------ccceEec
Confidence 889999999999998 67653310 001000 000 0113578
Q ss_pred chhHHHHcCCCcccccHHHHHHHHHHHHHC
Q 037566 327 SMNKSREFGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 327 d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
|++|+++|||+|.++++++++++++||+..
T Consensus 348 d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~ 377 (404)
T 1i24_A 348 KHTKLMELGLEPHYLSDSLLDSLLNFAVQF 377 (404)
T ss_dssp CCCHHHHTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHcCCCcCcCHHHHHHHHHHHHHhh
Confidence 999999899999999999999999999653
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=271.77 Aligned_cols=279 Identities=13% Similarity=0.121 Sum_probs=205.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--CCCC-CCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--WFPS-SHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~~~~-~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
+||++|+++|++ +|++|++++|++... .+.. .+++ ++.+|++|++++.+++++.. +|+|||+|+....
T Consensus 32 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~l~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~D~vih~A~~~~~ 102 (333)
T 2q1w_A 32 QIGSHIAELLLE------RGDKVVGIDNFATGRREHLKDHPNLT-FVEGSIADHALVNQLIGDLQ--PDAVVHTAASYKD 102 (333)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCSSCCGGGSCCCTTEE-EEECCTTCHHHHHHHHHHHC--CSEEEECCCCCSC
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCCccchhhHhhcCCce-EEEEeCCCHHHHHHHHhccC--CcEEEECceecCC
Confidence 489999999999 899999999975432 1111 5788 99999999999999998743 5899999986432
Q ss_pred ----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCC-Cc
Q 037566 78 ----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPN-FY 152 (360)
Q Consensus 78 ----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~-~~ 152 (360)
++ + +++|+.||.+++++|.+. +++||||+||.++||.... . ... |++|++ . |. +.
T Consensus 103 ~~~~~~-~-~~~N~~~~~~l~~a~~~~-----~~~~iV~~SS~~~~g~~~~-----~---~~~-~~~E~~--~--p~~~~ 162 (333)
T 2q1w_A 103 PDDWYN-D-TLTNCVGGSNVVQAAKKN-----NVGRFVYFQTALCYGVKPI-----Q---QPV-RLDHPR--N--PANSS 162 (333)
T ss_dssp TTCHHH-H-HHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGCSCCC-----S---SSB-CTTSCC--C--CTTCH
T ss_pred CccCCh-H-HHHHHHHHHHHHHHHHHh-----CCCEEEEECcHHHhCCCcc-----c---CCC-CcCCCC--C--CCCCc
Confidence 22 2 899999999999999986 7899999999999982100 0 022 788887 2 35 67
Q ss_pred HHHHHHHHh---cC-CCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHH
Q 037566 153 YAVEDIAAS---YS-PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAE 228 (360)
Q Consensus 153 Y~~ek~l~e---~~-~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~ 228 (360)
|+.+|...| .. .. +++++||+++|||+..+ ... .. +...+. .+.+ +.| +. ...++++++|+|+
T Consensus 163 Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~~~--~~~-~~-~~~~~~--~~~~--~~~-~~---~~~~~i~v~Dva~ 229 (333)
T 2q1w_A 163 YAISKSANEDYLEYSGL-DFVTFRLANVVGPRNVS--GPL-PI-FFQRLS--EGKK--CFV-TK---ARRDFVFVKDLAR 229 (333)
T ss_dssp HHHHHHHHHHHHHHHTC-CEEEEEESEEESTTCCS--SHH-HH-HHHHHH--TTCC--CEE-EE---CEECEEEHHHHHH
T ss_pred hHHHHHHHHHHHHhhhC-CeEEEeeceEECcCCcC--cHH-HH-HHHHHH--cCCe--eeC-CC---ceEeeEEHHHHHH
Confidence 999999888 23 33 89999999999998421 111 11 111121 2332 334 33 4578999999999
Q ss_pred HHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccc
Q 037566 229 QQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEI 308 (360)
Q Consensus 229 a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 308 (360)
+++.++..+. |++|||++|+.+|++|+++.+++.+|.+ ... ..|.+. .....
T Consensus 230 ai~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~--~~~~~~----------------------~~~~~- 281 (333)
T 2q1w_A 230 ATVRAVDGVG--HGAYHFSSGTDVAIKELYDAVVEAMALP-SYP--EPEIRE----------------------LGPDD- 281 (333)
T ss_dssp HHHHHHTTCC--CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCC--CCEEEE----------------------CCTTS-
T ss_pred HHHHHHhcCC--CCEEEeCCCCCccHHHHHHHHHHHhCCC-Cce--eCCCCC----------------------ccccc-
Confidence 9999887654 8999999999999999999999999987 311 011110 00000
Q ss_pred cccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCCC
Q 037566 309 TCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360 (360)
Q Consensus 309 ~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~ip 360 (360)
...+..+|++|++++||+|.++++|+|+++++||++.|++|
T Consensus 282 -----------~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~~~~~ 322 (333)
T 2q1w_A 282 -----------APSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYGVSG 322 (333)
T ss_dssp -----------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred -----------ccccccCCHHHHHhcCCCcCCCHHHHHHHHHHHHHHHCCCC
Confidence 01256899999987799999999999999999999999886
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=269.01 Aligned_cols=279 Identities=14% Similarity=0.144 Sum_probs=206.5
Q ss_pred CchHHHHHHHhcCCCCCCC--CcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC--
Q 037566 1 MAGLSLAEALKNNPTIPGG--PWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~--g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-- 76 (360)
+||++|+++|++ + |++|++++|++... .+++ ++.+|++|++++.++++..+ +|+|||+|+...
T Consensus 10 ~iG~~l~~~L~~------~~~g~~V~~~~r~~~~~----~~~~-~~~~D~~d~~~~~~~~~~~~--~d~vih~a~~~~~~ 76 (317)
T 3ajr_A 10 QIGTELVPYLAE------KYGKKNVIASDIVQRDT----GGIK-FITLDVSNRDEIDRAVEKYS--IDAIFHLAGILSAK 76 (317)
T ss_dssp TTHHHHHHHHHH------HHCGGGEEEEESSCCCC----TTCC-EEECCTTCHHHHHHHHHHTT--CCEEEECCCCCHHH
T ss_pred HHHHHHHHHHHH------hcCCCEEEEecCCCccc----cCce-EEEecCCCHHHHHHHHhhcC--CcEEEECCcccCCc
Confidence 699999999998 7 89999999876432 2678 99999999999999998443 699999998532
Q ss_pred --CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHH
Q 037566 77 --KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYA 154 (360)
Q Consensus 77 --~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~ 154 (360)
.++...+++|+.||.||+++|.+. +++||||+||.++||... ...+.+|+.+.. |.+.|+
T Consensus 77 ~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~e~~~~~--p~~~Y~ 138 (317)
T 3ajr_A 77 GEKDPALAYKVNMNGTYNILEAAKQH-----RVEKVVIPSTIGVFGPET-----------PKNKVPSITITR--PRTMFG 138 (317)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGCCTTS-----------CSSSBCSSSCCC--CCSHHH
T ss_pred cccChHHHhhhhhHHHHHHHHHHHHc-----CCCEEEEecCHHHhCCCC-----------CCCCccccccCC--CCchHH
Confidence 356778999999999999999986 789999999999998521 234677887754 477899
Q ss_pred HHHHHHh-------cCCCCcEEEEcCCCeeecCCC--C-cchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHH
Q 037566 155 VEDIAAS-------YSPAVTYSVHRSSIIIGASSR--S-LNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSR 224 (360)
Q Consensus 155 ~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~ 224 (360)
.+|...| ...+++++++||+++||++.. . ..+..... +...+ .+.++..++++. ...+++|++
T Consensus 139 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~---~~~~~i~v~ 211 (317)
T 3ajr_A 139 VTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEI-FYYAV---KREKYKCYLAPN---RALPMMYMP 211 (317)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHH-HHHHH---TTCCEEECSCTT---CCEEEEEHH
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHH-HHHHH---hCCCceeecCcc---ceeeeeEHH
Confidence 9998877 235899999999999997532 1 11222111 11111 233445556554 457899999
Q ss_pred HHHHHHHHHHcCCCC---CCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCC
Q 037566 225 VLAEQQIWAATTDRA---KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLY 301 (360)
Q Consensus 225 dla~a~~~a~~~~~~---~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (360)
|+|++++.++..+.. .|++|||++ ..+|++|+++.+++.+|...... .| ... . .+
T Consensus 212 Dva~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~~i~~---~~-~~~---~-------~~------- 269 (317)
T 3ajr_A 212 DALKALVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPEFEIEY---KE-DFR---D-------KI------- 269 (317)
T ss_dssp HHHHHHHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCSCCEEE---CC-CHH---H-------HH-------
T ss_pred HHHHHHHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCcccccc---cc-ccc---h-------hh-------
Confidence 999999988876543 368999985 67999999999999987311111 01 000 0 00
Q ss_pred ccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 302 KTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 302 ~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
. ..+...+|++|+++ |||+|.++++|+|+++++||+++
T Consensus 270 ----~-------------~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 308 (317)
T 3ajr_A 270 ----A-------------ATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEK 308 (317)
T ss_dssp ----H-------------TTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ----c-------------cccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence 0 01234789999976 79999999999999999999874
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=270.61 Aligned_cols=274 Identities=14% Similarity=0.125 Sum_probs=205.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
+||++|+++|++ +|++|++++|++.... ..-.+++ ++.+|++|++++.++++.++ +|+|||+|+....
T Consensus 31 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~l~~v~-~~~~Dl~d~~~~~~~~~~~~--~D~vih~A~~~~~ 101 (330)
T 2pzm_A 31 CLGSNLIEHWLP------QGHEILVIDNFATGKREVLPPVAGLS-VIEGSVTDAGLLERAFDSFK--PTHVVHSAAAYKD 101 (330)
T ss_dssp HHHHHHHHHHGG------GTCEEEEEECCSSSCGGGSCSCTTEE-EEECCTTCHHHHHHHHHHHC--CSEEEECCCCCSC
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCCccchhhhhccCCce-EEEeeCCCHHHHHHHHhhcC--CCEEEECCccCCC
Confidence 489999999999 8999999999654311 1115788 99999999999999998332 6899999985432
Q ss_pred ---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHH
Q 037566 78 ---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYA 154 (360)
Q Consensus 78 ---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~ 154 (360)
...+ +++|+.||.+++++|.+. +++|||++||.++||... + ...|++|++ .|.+.|+
T Consensus 102 ~~~~~~~-~~~N~~~~~~l~~a~~~~-----~~~~iV~~SS~~~~~~~~------~----~~~~~~E~~----~~~~~Y~ 161 (330)
T 2pzm_A 102 PDDWAED-AATNVQGSINVAKAASKA-----GVKRLLNFQTALCYGRPA------T----VPIPIDSPT----APFTSYG 161 (330)
T ss_dssp TTCHHHH-HHHHTHHHHHHHHHHHHH-----TCSEEEEEEEGGGGCSCS------S----SSBCTTCCC----CCCSHHH
T ss_pred ccccChh-HHHHHHHHHHHHHHHHHc-----CCCEEEEecCHHHhCCCc------c----CCCCcCCCC----CCCChHH
Confidence 1122 899999999999999987 689999999999998521 0 012788887 2466799
Q ss_pred HHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHH-HH
Q 037566 155 VEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAE-QQ 230 (360)
Q Consensus 155 ~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~-a~ 230 (360)
.+|...| +..+++++++||+++|||+... +.... +...+. .+. ...|++. ..++++++|+|+ ++
T Consensus 162 ~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~~--~~~~~--~~~~~~--~~~--~~~~~~~----~~~~i~~~Dva~~a~ 229 (330)
T 2pzm_A 162 ISKTAGEAFLMMSDVPVVSLRLANVTGPRLAI--GPIPT--FYKRLK--AGQ--KCFCSDT----VRDFLDMSDFLAIAD 229 (330)
T ss_dssp HHHHHHHHHHHTCSSCEEEEEECEEECTTCCS--SHHHH--HHHHHH--TTC--CCCEESC----EECEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeeeECcCCCC--CHHHH--HHHHHH--cCC--EEeCCCC----EecceeHHHHHHHHH
Confidence 9999888 3448999999999999998621 22111 111121 233 2234331 468899999999 99
Q ss_pred HHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccc
Q 037566 231 IWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITC 310 (360)
Q Consensus 231 ~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 310 (360)
+.++..+. |++|||++|+++|++|+++.+++.+|.+ + + ...+. .. .
T Consensus 230 ~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~-~---~~~~~----------------------~~--~--- 275 (330)
T 2pzm_A 230 LSLQEGRP--TGVFNVSTGEGHSIKEVFDVVLDYVGAT-L-A---EPVPV----------------------VA--P--- 275 (330)
T ss_dssp HHTSTTCC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-C-S---SCCCE----------------------EC--C---
T ss_pred HHHhhcCC--CCEEEeCCCCCCCHHHHHHHHHHHhCCC-C-c---eeCCC----------------------Cc--c---
Confidence 88876543 8999999999999999999999999987 2 2 01110 00 0
Q ss_pred cchhhhhhccccccccchhHH-----HHcCCCcccccHHHHHHHHHHHHHCCCC
Q 037566 311 FEALNTVLHLQFQHVSSMNKS-----REFGFFGFADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 311 ~~~~d~~~~~~~~~~~d~~Ka-----r~lG~~p~~~~~~~l~~~~~~~~~~g~i 359 (360)
.....+|++|+ ++|||+|.++++|+|+++++||++.|++
T Consensus 276 ----------~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 319 (330)
T 2pzm_A 276 ----------GADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLAWYDKYGVT 319 (330)
T ss_dssp ----------CTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCSC
T ss_pred ----------hhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHHHHHhhCcc
Confidence 01357788888 8899999999999999999999999986
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=276.08 Aligned_cols=282 Identities=10% Similarity=0.081 Sum_probs=208.6
Q ss_pred CchHHHHHHHhcCCCCCCCC-cEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccC--CCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGGP-WKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSI--SQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~--~~~v~~V~h~A~~~~ 76 (360)
+||++|+++|++ +| ++|++++|.+... ...-.+++ +.+|++|++.+.+++++. . ++|+|||+|+...
T Consensus 57 ~iG~~l~~~L~~------~g~~~V~~~~r~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~ 127 (357)
T 2x6t_A 57 FIGSNIVKALND------KGITDILVVDNLKDGTKFVNLVDLN--IADYMDKEDFLIQIMAGEEFG-DVEAIFHEGACSS 127 (357)
T ss_dssp HHHHHHHHHHHH------TTCCCEEEEECCSSGGGGGGTTTSC--CSEEEEHHHHHHHHHTTCCCS-SCCEEEECCSCCC
T ss_pred HHHHHHHHHHHH------CCCcEEEEEecCCCcchhhcccCce--EeeecCcHHHHHHHHhhcccC-CCCEEEECCcccC
Confidence 589999999999 89 9999999875431 00012333 679999999999988751 1 1689999998533
Q ss_pred ---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcH
Q 037566 77 ---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYY 153 (360)
Q Consensus 77 ---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y 153 (360)
.++++++++|+.||.|++++|.+. ++ ||||+||.++||.. ...+++|+++.. |.+.|
T Consensus 128 ~~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~-r~V~~SS~~v~g~~------------~~~~~~E~~~~~--p~~~Y 187 (357)
T 2x6t_A 128 TTEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGR------------TSDFIESREYEK--PLNVF 187 (357)
T ss_dssp TTCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGGGGCSC------------SSCCCSSGGGCC--CSSHH
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEcchHHhCCC------------CCCCcCCcCCCC--CCChh
Confidence 367788999999999999999987 67 99999999999853 235789998754 46779
Q ss_pred HHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc--chhHHHHHHHHHHHhhcCCCeeeeCCcccccc-cccccCH
Q 037566 154 AVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL--NNSLLTLAVYATICRHQGLPFRYLGNKYTWEH-FCDMSDS 223 (360)
Q Consensus 154 ~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~d~~~v 223 (360)
+.+|..+| ...+++++++||++||||++... ....... +...+ ..+.++.+.|++. . ..+++++
T Consensus 188 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~---~~~~~~i~v 261 (357)
T 2x6t_A 188 GYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFH-LNTQL--NNGESPKLFEGSE---NFKRDFVYV 261 (357)
T ss_dssp HHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHH-HHHHH--HTTCCCEEETTGG---GCEECEEEH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHH-HHHHH--HcCCCcEEeCCCC---cceEccEEH
Confidence 99998877 23589999999999999986421 1111111 11112 1355666677765 4 5789999
Q ss_pred HHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCcc
Q 037566 224 RVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKT 303 (360)
Q Consensus 224 ~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 303 (360)
+|+|++++.++..+. |++|||++|+++|+.|+++.+++.+|.+ . +. ..+.+. . . . .
T Consensus 262 ~Dva~ai~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~-~~-~~~~~~--~---~-------------~-~ 317 (357)
T 2x6t_A 262 GDVADVNLWFLENGV--SGIFNLGTGRAESFQAVADATLAYHKKG-Q-IE-YIPFPD--K---L-------------K-G 317 (357)
T ss_dssp HHHHHHHHHHHHHCC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-C-CE-EECCCG--G---G-------------T-T
T ss_pred HHHHHHHHHHHhcCC--CCeEEecCCCcccHHHHHHHHHHHcCCC-C-ce-ecCCCc--c---c-------------c-c
Confidence 999999999887654 8999999999999999999999999987 2 10 011111 0 0 0 0
Q ss_pred CcccccccchhhhhhccccccccchhHHHHcCC-CcccccHHHHHHHHHHHHHC
Q 037566 304 KMEEITCFEALNTVLHLQFQHVSSMNKSREFGF-FGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 304 ~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~-~p~~~~~~~l~~~~~~~~~~ 356 (360)
. ......+|++|++++|| .|.++++|+|+++++||+++
T Consensus 318 ~---------------~~~~~~~~~~k~~~lG~~~~~~~l~e~l~~~~~~~~~~ 356 (357)
T 2x6t_A 318 R---------------YQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD 356 (357)
T ss_dssp S---------------CCSBCCCCCHHHHHTTCCCCCCCHHHHHHHHHHHHC--
T ss_pred c---------------cccccccCHHHHHHcCCCCCCCCHHHHHHHHHHHHhhc
Confidence 0 01135789999999999 79999999999999999753
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=270.58 Aligned_cols=288 Identities=12% Similarity=0.016 Sum_probs=209.9
Q ss_pred CchHHHHHHHhcCCCCCCCC-------cEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGP-------WKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g-------~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+||++|+++|++ +| ++|++++|++.... ....+++ ++.+|++|++++.+++++ ++|+|||+|
T Consensus 25 ~iG~~l~~~L~~------~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~---~~d~vih~A 94 (342)
T 2hrz_A 25 MVGRKLTQRLVK------DGSLGGKPVEKFTLIDVFQPEAPAGFSGAVD-ARAADLSAPGEAEKLVEA---RPDVIFHLA 94 (342)
T ss_dssp HHHHHHHHHHHH------HCEETTEEEEEEEEEESSCCCCCTTCCSEEE-EEECCTTSTTHHHHHHHT---CCSEEEECC
T ss_pred HHHHHHHHHHHh------cCCcccCCCceEEEEEccCCccccccCCcee-EEEcCCCCHHHHHHHHhc---CCCEEEECC
Confidence 589999999999 89 89999999764321 1235788 999999999999999862 168999999
Q ss_pred eecC----CChhHhhhhhHHHHHHHHHHHHhhccCCCC-----ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRL----KSEEINISNNSTMFKNVMSVVVDSNKGRSR-----LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~-----v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+... .++..++++|+.||.+++++|.+. + ++|||++||.++||.. ...|++|++
T Consensus 95 ~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~-----~~~~~~~~~iv~~SS~~~~~~~------------~~~~~~E~~ 157 (342)
T 2hrz_A 95 AIVSGEAELDFDKGYRINLDGTRYLFDAIRIA-----NGKDGYKPRVVFTSSIAVFGAP------------LPYPIPDEF 157 (342)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-----HHHHCCCCEEEEEEEGGGCCSS------------CCSSBCTTC
T ss_pred ccCcccccccHHHHHHHHHHHHHHHHHHHHhc-----ccccCCCcEEEEeCchHhhCCC------------CCCCcCCCC
Confidence 8532 356778899999999999999886 4 7899999999999852 245789999
Q ss_pred CCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeee-cCCCC-cchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 144 LRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIG-ASSRS-LNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyG-p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
|.. |.+.|+.+|...| ...+++++++|+++||| |+... ........ +...+ ..+.+..+++++.
T Consensus 158 ~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~-- 230 (342)
T 2hrz_A 158 HTT--PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSN-ILREP--LVGQEAVLPVPES-- 230 (342)
T ss_dssp CCC--CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHH-HHHHH--HTTCCEEECSCTT--
T ss_pred CCC--CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHH-HHHHH--hcCCCeeccCCCc--
Confidence 865 4678999888877 34579999999999999 76532 11111111 11111 1355555555543
Q ss_pred cccccccCHHHHHHHHHHHHcCCCC---CCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHH
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTDRA---KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIW 291 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~~~---~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (360)
...++++++|+|++++.++..+.. .+++||++ |+.+|++|+++.+++.+|.+........|.+. ..
T Consensus 231 -~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~---~~------ 299 (342)
T 2hrz_A 231 -IRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEM---IM------ 299 (342)
T ss_dssp -CEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHH---HH------
T ss_pred -cceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcc---hh------
Confidence 345789999999999998876533 47899995 67899999999999999976421100001000 00
Q ss_pred HHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCC
Q 037566 292 DEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~i 359 (360)
.+ .. .+...+|++|+++|||+|.++++|+|+++++||+ .|++
T Consensus 300 -~~-----------------------~~-~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~-~~~~ 341 (342)
T 2hrz_A 300 -RM-----------------------CE-GWAPGFEAKRARELGFTAESSFEEIIQVHIEDEL-GGSL 341 (342)
T ss_dssp -HH-----------------------HT-TSCCCBCCHHHHHTTCCCCSSHHHHHHHHHHHHS-TTCC
T ss_pred -hh-----------------------hc-ccccccChHHHHHcCCCCCCCHHHHHHHHHHHhc-CCCC
Confidence 00 00 1123689999988999999999999999999997 5543
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=267.07 Aligned_cols=261 Identities=10% Similarity=0.090 Sum_probs=199.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
+||++|+++|++ +|++|++++|+ .+|++|++++.+++++++ +|+|||+|+...
T Consensus 23 ~iG~~l~~~L~~------~g~~V~~~~r~---------------~~Dl~d~~~~~~~~~~~~--~d~vih~A~~~~~~~~ 79 (292)
T 1vl0_A 23 QLGREIQKQLKG------KNVEVIPTDVQ---------------DLDITNVLAVNKFFNEKK--PNVVINCAAHTAVDKC 79 (292)
T ss_dssp HHHHHHHHHHTT------SSEEEEEECTT---------------TCCTTCHHHHHHHHHHHC--CSEEEECCCCCCHHHH
T ss_pred hHHHHHHHHHHh------CCCeEEeccCc---------------cCCCCCHHHHHHHHHhcC--CCEEEECCccCCHHHH
Confidence 589999999998 89999999985 258999999999998543 689999998543
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.++..++++|+.||.|++++|.+. ++ ||||+||.++||.. ...|++|+++.. |.+.|+.
T Consensus 80 ~~~~~~~~~~nv~~~~~l~~a~~~~-----~~-~iv~~SS~~v~~~~------------~~~~~~E~~~~~--~~~~Y~~ 139 (292)
T 1vl0_A 80 EEQYDLAYKINAIGPKNLAAAAYSV-----GA-EIVQISTDYVFDGE------------AKEPITEFDEVN--PQSAYGK 139 (292)
T ss_dssp HHCHHHHHHHHTHHHHHHHHHHHHH-----TC-EEEEEEEGGGSCSC------------CSSCBCTTSCCC--CCSHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEechHHeECCC------------CCCCCCCCCCCC--CccHHHH
Confidence 356778999999999999999987 56 99999999999853 245789998864 4678999
Q ss_pred HHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIW 232 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~ 232 (360)
+|...| +..+.+++++||++|||| ..+.... +...+ ..+.++...|+ ...++++++|+|++++.
T Consensus 140 sK~~~E~~~~~~~~~~~~lR~~~v~G~-~~~~~~~-----~~~~~--~~~~~~~~~~~-----~~~~~i~v~Dva~~~~~ 206 (292)
T 1vl0_A 140 TKLEGENFVKALNPKYYIVRTAWLYGD-GNNFVKT-----MINLG--KTHDELKVVHD-----QVGTPTSTVDLARVVLK 206 (292)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECSEESS-SSCHHHH-----HHHHH--HHCSEEEEESS-----CEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEeeeeeeCC-CcChHHH-----HHHHH--hcCCcEEeecC-----eeeCCccHHHHHHHHHH
Confidence 999888 333457999999999999 3332111 11111 13555556664 45789999999999999
Q ss_pred HHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccc
Q 037566 233 AATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFE 312 (360)
Q Consensus 233 a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 312 (360)
++..+ .|++||+++|+++|++|+++.+++.+|.+.... ..|... .+. .. .+
T Consensus 207 ~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~-----------------~~~--~~-~~----- 257 (292)
T 1vl0_A 207 VIDEK--NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVT--PCTTEE-----------------FPR--PA-KR----- 257 (292)
T ss_dssp HHHHT--CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEE--EECSTT-----------------SCC--SS-CC-----
T ss_pred HHhcC--CCcEEEecCCCCccHHHHHHHHHHHhCCCCcee--eccccc-----------------cCc--cc-CC-----
Confidence 88764 689999999999999999999999999864311 011110 000 00 00
Q ss_pred hhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 313 ALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 313 ~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
.....+|++|+++ |||+|. +++|+|+++++||++
T Consensus 258 --------~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 258 --------PKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQM 292 (292)
T ss_dssp --------CSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHTC
T ss_pred --------CccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhcC
Confidence 1246789999987 799998 999999999999964
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=267.01 Aligned_cols=274 Identities=13% Similarity=0.109 Sum_probs=202.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
+||++|+++|++ +|++|++++|.+... +....+++ ++.+|++|+. +.+ +|+|||+|+.
T Consensus 38 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~-----~~~----~d~vih~A~~ 101 (343)
T 2b69_A 38 FVGSHLTDKLMM------DGHEVTVVDNFFTGRKRNVEHWIGHENFE-LINHDVVEPL-----YIE----VDQIYHLASP 101 (343)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCSSCCGGGTGGGTTCTTEE-EEECCTTSCC-----CCC----CSEEEECCSC
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCCccchhhhhhhccCCceE-EEeCccCChh-----hcC----CCEEEECccc
Confidence 589999999999 899999999964321 11235789 9999999863 344 6899999985
Q ss_pred cC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC---
Q 037566 75 RL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL--- 146 (360)
Q Consensus 75 ~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~--- 146 (360)
.. .++..++++|+.||.||+++|.+. ++ ||||+||..+||.. ...|++|+.+..
T Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~g~~------------~~~~~~E~~~~~~~~ 163 (343)
T 2b69_A 102 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-----GA-RLLLASTSEVYGDP------------EVHPQSEDYWGHVNP 163 (343)
T ss_dssp CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-----TC-EEEEEEEGGGGBSC------------SSSSBCTTCCCBCCS
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CC-cEEEECcHHHhCCC------------CCCCCcccccccCCC
Confidence 32 356778899999999999999987 55 89999999999853 235678874211
Q ss_pred CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 147 PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
..|.+.|+.+|...| ...+++++++||++||||+............+.. + ..+.++.+.|++. ...+
T Consensus 164 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~---~~~~ 237 (343)
T 2b69_A 164 IGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQ-A--LQGEPLTVYGSGS---QTRA 237 (343)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHH-H--HHTCCEEEESSSC---CEEE
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHH-H--HcCCCceEcCCCC---eEEe
Confidence 134667999888777 2358999999999999997532111111111111 1 1356666677765 5578
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhC
Q 037566 220 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHG 299 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
+++++|+|++++.++..+ .+++|||++++++|++|+++.+++.+|.+.+.. ..|..
T Consensus 238 ~v~v~Dva~a~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~--~~p~~-------------------- 293 (343)
T 2b69_A 238 FQYVSDLVNGLVALMNSN--VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ--FLSEA-------------------- 293 (343)
T ss_dssp CEEHHHHHHHHHHHHTSS--CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEE--EECCC--------------------
T ss_pred eEeHHHHHHHHHHHHhcC--CCCeEEecCCCCCcHHHHHHHHHHHhCCCCCce--eCCCC--------------------
Confidence 999999999999887643 378999999999999999999999999764311 01100
Q ss_pred CCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 300 l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
... .....+|++|+++ |||+|.++++|+|+++++||+++
T Consensus 294 ----~~~--------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 333 (343)
T 2b69_A 294 ----QDD--------------PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 333 (343)
T ss_dssp ----TTC--------------CCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred ----CCC--------------CceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 000 1135779999986 79999999999999999999864
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=271.04 Aligned_cols=273 Identities=11% Similarity=0.118 Sum_probs=184.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
+||++|+++|++ +|++|++++|++.. + . ++.+|++|++++.+++++++ +|+|||+|+...
T Consensus 13 ~iG~~l~~~L~~------~g~~V~~~~r~~~~-----~--~-~~~~Dl~d~~~~~~~~~~~~--~d~vih~A~~~~~~~~ 76 (315)
T 2ydy_A 13 LLGRAVHKEFQQ------NNWHAVGCGFRRAR-----P--K-FEQVNLLDSNAVHHIIHDFQ--PHVIVHCAAERRPDVV 76 (315)
T ss_dssp HHHHHHHHHHHT------TTCEEEEEC--------------------------CHHHHHHHC--CSEEEECC--------
T ss_pred HHHHHHHHHHHh------CCCeEEEEccCCCC-----C--C-eEEecCCCHHHHHHHHHhhC--CCEEEECCcccChhhh
Confidence 489999999999 89999999986532 1 3 68899999999999998753 699999998532
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.++..++++|+.||.+++++|.+. ++ ||||+||..+||. ...|++|+++.. |.+.|+.
T Consensus 77 ~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~~~-------------~~~~~~E~~~~~--~~~~Y~~ 135 (315)
T 2ydy_A 77 ENQPDAASQLNVDASGNLAKEAAAV-----GA-FLIYISSDYVFDG-------------TNPPYREEDIPA--PLNLYGK 135 (315)
T ss_dssp -----------CHHHHHHHHHHHHH-----TC-EEEEEEEGGGSCS-------------SSCSBCTTSCCC--CCSHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEchHHHcCC-------------CCCCCCCCCCCC--CcCHHHH
Confidence 256678899999999999999987 55 8999999999984 145789998754 4678999
Q ss_pred HHHHHh---cCCCCcEEEEcCCCeeecCCC---CcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIIIGASSR---SLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQ 229 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vyGp~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a 229 (360)
+|...| +..+++++++||++||||++. +....+ ...+. ..+.++...|+ ...++++++|+|++
T Consensus 136 sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~-----~~~~~i~v~Dva~a 204 (315)
T 2ydy_A 136 TKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVM-----FDKVQ-FSNKSANMDHW-----QQRFPTHVKDVATV 204 (315)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGG-----HHHHH-CCSSCEEEECS-----SBBCCEEHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHH-----HHHHH-hcCCCeeeccC-----ceECcEEHHHHHHH
Confidence 999888 344688999999999999865 222211 11111 03455555553 45789999999999
Q ss_pred HHHHHcCC---CCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcc
Q 037566 230 QIWAATTD---RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKME 306 (360)
Q Consensus 230 ~~~a~~~~---~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 306 (360)
++.++..+ ...|++|||++|+++|+.|+++.+++.+|.+.+.. .+.+. + +.. .. .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~~--~---------------~~~-~~-~ 262 (315)
T 2ydy_A 205 CRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHL---RPITD--S---------------PVL-GA-Q 262 (315)
T ss_dssp HHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTE---EEECS--C---------------CCS-SS-C
T ss_pred HHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhhe---ecccc--c---------------ccc-cc-C
Confidence 99887643 34589999999999999999999999999865311 01110 0 000 00 0
Q ss_pred cccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHC
Q 037566 307 EITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 307 ~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
...+..+|++|++++||+|.++++|+|+++++||+++
T Consensus 263 -------------~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~ 299 (315)
T 2ydy_A 263 -------------RPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLID 299 (315)
T ss_dssp -------------CCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHGGGCC-
T ss_pred -------------CCcccccchHHHHhcCCCCCCCHHHHHHHHHHHHccc
Confidence 0124688999998889999999999999999999775
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=292.02 Aligned_cols=289 Identities=12% Similarity=0.090 Sum_probs=211.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+||++|+++|++ +|++|++++|++.... ....+++ ++.+|++|++++.+++++.+ +|+|||+|
T Consensus 22 ~IG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~-~v~~Dl~d~~~l~~~~~~~~--~D~Vih~A 92 (699)
T 1z45_A 22 YIGSHTVVELIE------NGYDCVVADNLSNSTYDSVARLEVLTKHHIP-FYEVDLCDRKGLEKVFKEYK--IDSVIHFA 92 (699)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCSSCCTHHHHHHHHHHTSCCC-EEECCTTCHHHHHHHHHHSC--CCEEEECC
T ss_pred HHHHHHHHHHHH------CcCEEEEEECCCcchHHHHHHHhhccCCceE-EEEcCCCCHHHHHHHHHhCC--CCEEEECC
Confidence 489999999999 8999999998754310 0135688 99999999999999998543 69999999
Q ss_pred eecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 73 FQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 73 ~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
+... .++.+++++|+.||.+|+++|++. +++|||++||.++||.... . ....|++|+++..
T Consensus 93 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~~iV~~SS~~vyg~~~~-------~-~~~~~~~E~~~~~- 158 (699)
T 1z45_A 93 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYGDATR-------F-PNMIPIPEECPLG- 158 (699)
T ss_dssp SCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCCGGG-------S-TTCCSBCTTSCCC-
T ss_pred cccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECcHHHhCCCcc-------c-cccCCccccCCCC-
Confidence 8533 245678899999999999999887 7899999999999985310 0 0135788888754
Q ss_pred CCCCcHHHHHHHHh-------cC--CCCcEEEEcCCCeeecCCCCc--------chhHHHHHHHHHHHhhcCCCeeeeC-
Q 037566 148 FPNFYYAVEDIAAS-------YS--PAVTYSVHRSSIIIGASSRSL--------NNSLLTLAVYATICRHQGLPFRYLG- 209 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e-------~~--~~~~~~ilRp~~vyGp~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~G- 209 (360)
|.+.|+.+|...| .. .+++++|+||++||||++... ...... .+..+.+..+.++.+.|
T Consensus 159 -p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~ 235 (699)
T 1z45_A 159 -PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLP--YMAQVAVGRREKLYIFGD 235 (699)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHH--HHHHHHTTSSSCCCCC--
T ss_pred -CCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHH--HHHHHHhcCCCceEEeCC
Confidence 4677999988877 11 689999999999999864211 111111 11111121234555555
Q ss_pred -----CcccccccccccCHHHHHHHHHHHHcCC------CCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCC
Q 037566 210 -----NKYTWEHFCDMSDSRVLAEQQIWAATTD------RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKF 278 (360)
Q Consensus 210 -----~~~~~~~~~d~~~v~dla~a~~~a~~~~------~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~ 278 (360)
++. ..+|++|++|+|++++.++..+ ...+++|||++++.+|++|+++.+++.+|.+.+..
T Consensus 236 ~~~~~~g~---~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~------ 306 (699)
T 1z45_A 236 DYDSRDGT---PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK------ 306 (699)
T ss_dssp ----CCSS---CEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-------
T ss_pred cccCCCCC---eeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCce------
Confidence 343 5689999999999999887531 22368999999999999999999999999764421
Q ss_pred CHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCC
Q 037566 279 DAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMK 357 (360)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g 357 (360)
. ... + ... .....+|++|+++ |||+|.++++|+|+++++||++++
T Consensus 307 -~---~~~----------~----~~~----------------~~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~ 352 (699)
T 1z45_A 307 -V---TGR----------R----AGD----------------VLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENP 352 (699)
T ss_dssp ------------------------------------------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred -e---cCC----------C----CCc----------------cccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCC
Confidence 0 000 0 000 0145789999976 899999999999999999999875
Q ss_pred C
Q 037566 358 I 358 (360)
Q Consensus 358 ~ 358 (360)
+
T Consensus 353 ~ 353 (699)
T 1z45_A 353 F 353 (699)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-34 Score=262.52 Aligned_cols=262 Identities=14% Similarity=0.160 Sum_probs=195.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCCh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSE 79 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~ 79 (360)
+||++|+++|++ +|++|++++|++... .+...+++ ++.+|++|.+ +++ +|+|||+|+.....
T Consensus 15 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d~~-----~~~----~d~vi~~a~~~~~~- 77 (286)
T 3ius_A 15 YTARVLSRALAP------QGWRIIGTSRNPDQMEAIRASGAE-PLLWPGEEPS-----LDG----VTHLLISTAPDSGG- 77 (286)
T ss_dssp HHHHHHHHHHGG------GTCEEEEEESCGGGHHHHHHTTEE-EEESSSSCCC-----CTT----CCEEEECCCCBTTB-
T ss_pred HHHHHHHHHHHH------CCCEEEEEEcChhhhhhHhhCCCe-EEEecccccc-----cCC----CCEEEECCCccccc-
Confidence 589999999999 899999999986532 11235789 9999999944 444 68999999854322
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA 159 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l 159 (360)
...+++++++|++. ..+++||||+||.++||.. ...+++|+++.. |.+.|+.+|..
T Consensus 78 -------~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~vyg~~------------~~~~~~E~~~~~--p~~~Y~~sK~~ 133 (286)
T 3ius_A 78 -------DPVLAALGDQIAAR---AAQFRWVGYLSTTAVYGDH------------DGAWVDETTPLT--PTAARGRWRVM 133 (286)
T ss_dssp -------CHHHHHHHHHHHHT---GGGCSEEEEEEEGGGGCCC------------TTCEECTTSCCC--CCSHHHHHHHH
T ss_pred -------cHHHHHHHHHHHhh---cCCceEEEEeecceecCCC------------CCCCcCCCCCCC--CCCHHHHHHHH
Confidence 12368999999883 2379999999999999853 245789999865 46789999998
Q ss_pred Hh---cC-CCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHc
Q 037566 160 AS---YS-PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAAT 235 (360)
Q Consensus 160 ~e---~~-~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~ 235 (360)
+| .. .+++++++||++||||+.... .. + ..+.++.+.+++ ..++++|++|+|++++.++.
T Consensus 134 ~E~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~---------~--~~~~~~~~~~~~----~~~~~i~v~Dva~a~~~~~~ 197 (286)
T 3ius_A 134 AEQQWQAVPNLPLHVFRLAGIYGPGRGPF-SK---------L--GKGGIRRIIKPG----QVFSRIHVEDIAQVLAASMA 197 (286)
T ss_dssp HHHHHHHSTTCCEEEEEECEEEBTTBSSS-TT---------S--SSSCCCEEECTT----CCBCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCEEEEeccceECCCchHH-HH---------H--hcCCccccCCCC----cccceEEHHHHHHHHHHHHh
Confidence 88 33 489999999999999986432 11 1 135555555553 45799999999999999988
Q ss_pred CCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhh
Q 037566 236 TDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALN 315 (360)
Q Consensus 236 ~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d 315 (360)
++. .|++|||++|+++|+.|+++.+++.+|.+.+.. .+.... ...+.. .
T Consensus 198 ~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~~~----~~~~~~-----------------------~ 246 (286)
T 3ius_A 198 RPD-PGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPA---VDFDKA----DLTPMA-----------------------R 246 (286)
T ss_dssp SCC-TTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCE---EEGGGS----CCCHHH-----------------------H
T ss_pred CCC-CCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcc---cchhhh----ccChhH-----------------------H
Confidence 765 689999999999999999999999999875421 111100 000000 0
Q ss_pred hhhccccccccchhHHHH-cCCCccc-ccHHHHHHHHHH
Q 037566 316 TVLHLQFQHVSSMNKSRE-FGFFGFA-DTMKSIRTWVKK 352 (360)
Q Consensus 316 ~~~~~~~~~~~d~~Kar~-lG~~p~~-~~~~~l~~~~~~ 352 (360)
..+ ..+..+|++|+++ |||+|++ +++|+|+++++.
T Consensus 247 ~~~--~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~ 283 (286)
T 3ius_A 247 SFY--SENKRVRNDRIKEELGVRLKYPNYRVGLEALQAD 283 (286)
T ss_dssp HTT--SCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHT
T ss_pred Hhh--cCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHh
Confidence 000 1256899999988 7999999 799999998764
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-34 Score=267.55 Aligned_cols=283 Identities=16% Similarity=0.141 Sum_probs=197.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCC--CCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFP--SSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~--~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ +|++|++++|++... .+. ..+++ ++.+|++|++++.+++++ +|+|||+
T Consensus 16 fIG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~Vih~ 84 (337)
T 2c29_D 16 FIGSWLVMRLLE------RGYTVRATVRDPTNVKKVKHLLDLPKAETHLT-LWKADLADEGSFDEAIKG----CTGVFHV 84 (337)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESCTTCHHHHHHHHTSTTHHHHEE-EEECCTTSTTTTHHHHTT----CSEEEEC
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCcchhHHHHHHHhcccCCCeEE-EEEcCCCCHHHHHHHHcC----CCEEEEe
Confidence 589999999999 899999999976421 011 12578 999999999999999987 5899999
Q ss_pred eeecC---CCh-hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc-cccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 72 MFQRL---KSE-EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK-HYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 72 A~~~~---~~~-~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~-vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
|+... .++ .+++++|+.||.|++++|.+. + +++||||+||++ +|+... ...+++|+++..
T Consensus 85 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~---~-~~~riV~~SS~~~~~~~~~-----------~~~~~~E~~~~~ 149 (337)
T 2c29_D 85 ATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---K-TVRRLVFTSSAGTVNIQEH-----------QLPVYDESCWSD 149 (337)
T ss_dssp CCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHH---S-CCCEEEEECCGGGTSCSSS-----------CCSEECTTCCCC
T ss_pred ccccCCCCCChHHHHHHHHHHHHHHHHHHHHhC---C-CccEEEEeeeHhhcccCCC-----------CCcccCcccCCc
Confidence 98432 233 358899999999999999987 1 389999999987 454321 233577876421
Q ss_pred C-------CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 147 P-------FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 147 p-------~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
. .|.+.|+.+|.++| +..+++++++||++||||+....+...... ....+ .|.+.. .++.
T Consensus 150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~-~~~~~---~g~~~~-~~~~- 223 (337)
T 2c29_D 150 MEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLIT-ALSPI---TGNEAH-YSII- 223 (337)
T ss_dssp HHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHH-HTHHH---HTCGGG-HHHH-
T ss_pred hhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHH-HHHHH---cCCCcc-cccc-
Confidence 0 13456999998877 235899999999999999864322211100 00001 122211 1111
Q ss_pred cccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHH
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWD 292 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
....++|++|+|+++++++..+.. ++.||+++ ..+|++|+++.+++.++.. . .|..+
T Consensus 224 ---~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~~--~----~~~~~------------ 280 (337)
T 2c29_D 224 ---RQGQFVHLDDLCNAHIYLFENPKA-EGRYICSS-HDCIILDLAKMLREKYPEY--N----IPTEF------------ 280 (337)
T ss_dssp ---TEEEEEEHHHHHHHHHHHHHCTTC-CEEEEECC-EEEEHHHHHHHHHHHCTTS--C----CCSCC------------
T ss_pred ---CCCCEEEHHHHHHHHHHHhcCccc-CceEEEeC-CCCCHHHHHHHHHHHCCCc--c----CCCCC------------
Confidence 123489999999999998876543 45787654 5689999999999987321 1 11110
Q ss_pred HHHHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCCC
Q 037566 293 EIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360 (360)
Q Consensus 293 ~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~ip 360 (360)
.... .. .....+|++|+++|||+|+++++|+|+++++||++.|++|
T Consensus 281 --------~~~~-~~-------------~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~ 326 (337)
T 2c29_D 281 --------KGVD-EN-------------LKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLP 326 (337)
T ss_dssp --------TTCC-TT-------------CCCCEECCHHHHHHTCCCCCCHHHHHHHHHHHHHHTTSSC
T ss_pred --------Cccc-CC-------------CccccccHHHHHHcCCCcCCCHHHHHHHHHHHHHHcCCCC
Confidence 0000 00 1145789999977999999999999999999999999886
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=271.39 Aligned_cols=288 Identities=15% Similarity=0.103 Sum_probs=192.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+||++|+++|++ +|++|++++|++.... ....+++ ++.+|++|++++.+++++ +|+|||+|
T Consensus 20 fIG~~l~~~Ll~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~D~Vih~A 88 (338)
T 2rh8_A 20 FVASLLVKLLLQ------KGYAVNTTVRDPDNQKKVSHLLELQELGDLK-IFRADLTDELSFEAPIAG----CDFVFHVA 88 (338)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESCTTCTTTTHHHHHHGGGSCEE-EEECCTTTSSSSHHHHTT----CSEEEEES
T ss_pred HHHHHHHHHHHH------CCCEEEEEEcCcchhhhHHHHHhcCCCCcEE-EEecCCCChHHHHHHHcC----CCEEEEeC
Confidence 589999999999 8999999998754311 0124688 999999999999999988 48999999
Q ss_pred eecC---CCh-hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc-cccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 73 FQRL---KSE-EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK-HYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 73 ~~~~---~~~-~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~-vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
+... .++ .+++++|+.||.|++++|.+. + +++||||+||++ +|+.+.. + ...+++|+++..+
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~---~-~v~r~V~~SS~~~~~~~~~~-----~----~~~~~~E~~~~~~ 155 (338)
T 2rh8_A 89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRA---K-SVKRVILTSSAAAVTINQLD-----G----TGLVVDEKNWTDI 155 (338)
T ss_dssp SCCCC---------CHHHHHHHHHHHHHHHHC---T-TCCEEEEECCHHHHHHHHHT-----C----SCCCCCTTTTTCC
T ss_pred CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHc---C-CcCEEEEEecHHHeecCCcC-----C----CCcccChhhccch
Confidence 8432 123 348899999999999999986 1 489999999987 4543210 0 1136788763211
Q ss_pred ------CC-CCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 148 ------FP-NFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 148 ------~p-~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
.| .+.|+.+|.++| +..+++++++||++||||+........... +...+ .+.+..+ ++..+
T Consensus 156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~-~~~~~---~g~~~~~-~~~~~ 230 (338)
T 2rh8_A 156 EFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGL-AMSLI---TGNEFLI-NGMKG 230 (338)
T ss_dssp -------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHH-HHHHH---HTCHHHH-HHHHH
T ss_pred hhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHH-HHHHH---cCCcccc-ccccc
Confidence 11 224776665555 235899999999999999864322221111 11111 2222211 11110
Q ss_pred ---ccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHH
Q 037566 214 ---WEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEI 290 (360)
Q Consensus 214 ---~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
.....+++|++|+|+++++++..+.. ++.||++++ .+|++|+++.+++.++... .|..+
T Consensus 231 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~~~-~~s~~e~~~~l~~~~~~~~------~~~~~---------- 292 (338)
T 2rh8_A 231 MQMLSGSVSIAHVEDVCRAHIFVAEKESA-SGRYICCAA-NTSVPELAKFLSKRYPQYK------VPTDF---------- 292 (338)
T ss_dssp HHHHHSSEEEEEHHHHHHHHHHHHHCTTC-CEEEEECSE-EECHHHHHHHHHHHCTTSC------CCCCC----------
T ss_pred cccccCcccEEEHHHHHHHHHHHHcCCCc-CCcEEEecC-CCCHHHHHHHHHHhCCCCC------CCCCC----------
Confidence 01123899999999999998875433 457988764 6899999999998875211 11110
Q ss_pred HHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCCC
Q 037566 291 WDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKIIP 360 (360)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~ip 360 (360)
.... . .....+|++|+++|||+|+++++|+|+++++||++.|++|
T Consensus 293 ----------~~~~--~-------------~~~~~~d~~k~~~lG~~p~~~l~~gl~~~~~~~~~~~~~~ 337 (338)
T 2rh8_A 293 ----------GDFP--P-------------KSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ 337 (338)
T ss_dssp ----------TTSC--S-------------SCSCCCCCHHHHHHTCCCSCCHHHHHHHHHHHHHHTTCC-
T ss_pred ----------CCCC--c-------------CcceeechHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 0000 0 0125789999977999999999999999999999999986
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=286.58 Aligned_cols=298 Identities=13% Similarity=0.127 Sum_probs=214.1
Q ss_pred CchHHHHHHHhcCCCCCCC-CcEEEEEecCCCCC--CCCCCCceeeEeeccCChHH-HHHHHccCCCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGG-PWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTD-TTQKLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~-l~~~l~~~~~~v~~V~h~A~~~~ 76 (360)
+||++|+++|++ + |++|++++|++... .....+++ ++.+|++|.++ +.+++++ +|+|||+|+...
T Consensus 326 ~IG~~l~~~Ll~------~~g~~V~~~~r~~~~~~~~~~~~~v~-~v~~Dl~d~~~~~~~~~~~----~D~Vih~Aa~~~ 394 (660)
T 1z7e_A 326 FIGNHLTERLLR------EDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEWIEYHVKK----CDVVLPLVAIAT 394 (660)
T ss_dssp HHHHHHHHHHHH------SSSEEEEEEESCCTTTGGGTTCTTEE-EEECCTTTCHHHHHHHHHH----CSEEEECCCCCC
T ss_pred HHHHHHHHHHHh------cCCCEEEEEEcCchhhhhhccCCceE-EEECCCCCcHHHHHHhhcC----CCEEEECceecC
Confidence 589999999998 6 89999999986542 11245789 99999999875 7778887 589999998543
Q ss_pred -----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC---CC-
Q 037566 77 -----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR---LP- 147 (360)
Q Consensus 77 -----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~---~p- 147 (360)
.++.+++++|+.||.|++++|.+. + +||||+||.++||.. ...+++|+++. .|
T Consensus 395 ~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~-~r~V~~SS~~vyg~~------------~~~~~~E~~~~~~~~p~ 456 (660)
T 1z7e_A 395 PIEYTRNPLRVFELDFEENLRIIRYCVKY-----R-KRIIFPSTSEVYGMC------------SDKYFDEDHSNLIVGPV 456 (660)
T ss_dssp THHHHHSHHHHHHHHTHHHHHHHHHHHHT-----T-CEEEEECCGGGGBTC------------CSSSBCTTTCCEEECCT
T ss_pred ccccccCHHHHHHhhhHHHHHHHHHHHHh-----C-CEEEEEecHHHcCCC------------CCcccCCCccccccCcc
Confidence 256678899999999999999986 5 899999999999853 23567888753 11
Q ss_pred -CCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc------chhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 148 -FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL------NNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 148 -~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
.|.+.|+.+|..+| ...+++++++||++||||+.... ........+. .+ ..+.++.+.|++.
T Consensus 457 ~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~--~~g~~~~~~g~g~- 532 (660)
T 1z7e_A 457 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL-NL--VEGSPIKLIDGGK- 532 (660)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHH-HH--HHTCCEEEEGGGC-
T ss_pred cCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHH-HH--HcCCCcEEeCCCC-
Confidence 34567999998877 23589999999999999986321 0111111111 11 1356766677665
Q ss_pred ccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC-cccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHH
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD-VFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEI 290 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~-~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
..+++++++|+|++++.++..+. ..|++||+++|+ ++|+.|+++.+++.+|.+.... ..|...........
T Consensus 533 --~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~--~~p~~~~~~~~~~~-- 606 (660)
T 1z7e_A 533 --QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRH--HFPPFAGFRVVESS-- 606 (660)
T ss_dssp --CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGG--GSCCCCCEEEECTH--
T ss_pred --eEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCccc--ccCccccccchhcc--
Confidence 56799999999999999887653 358999999997 8999999999999999753211 01111000000000
Q ss_pred HHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHCCC
Q 037566 291 WDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREMKI 358 (360)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~g~ 358 (360)
. ..+ ..... .....+|++|+++ |||+|+++++|+|+++++||+++.-
T Consensus 607 --~---~~~---~~~~~-------------~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~ 654 (660)
T 1z7e_A 607 --S---YYG---KGYQD-------------VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_dssp --H---HHC---TTCCC-------------CSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred --c---ccc---ccccc-------------hhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence 0 000 00000 1245789999987 7999999999999999999998764
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-33 Score=259.11 Aligned_cols=282 Identities=13% Similarity=0.088 Sum_probs=194.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEec-CCCCC--C-----CC--CCCceeeEeeccCChHHHHHHHccCCCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTAR-RPPPS--W-----FP--SSHVDHYITFDALDSTDTTQKLSSISQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r-~~~~~--~-----~~--~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h 70 (360)
+||++|+++|++ +|++|++++| ++... . +. ..+++ ++.+|++|++++.+++++ +|+|||
T Consensus 12 ~iG~~l~~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~vih 80 (322)
T 2p4h_X 12 FLGSWIIKSLLE------NGYSVNTTIRADPERKRDVSFLTNLPGASEKLH-FFNADLSNPDSFAAAIEG----CVGIFH 80 (322)
T ss_dssp HHHHHHHHHHHH------TTCEEEEECCCC----CCCHHHHTSTTHHHHEE-ECCCCTTCGGGGHHHHTT----CSEEEE
T ss_pred HHHHHHHHHHHH------CCCEEEEEEeCCccchhHHHHHHhhhccCCceE-EEecCCCCHHHHHHHHcC----CCEEEE
Confidence 589999999999 8999999998 54210 0 00 12578 899999999999999987 589999
Q ss_pred eeeecC---CC-hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccc-cccccCCcccCCcCCCCCCCCCCCCC
Q 037566 71 VMFQRL---KS-EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHY-MGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 71 ~A~~~~---~~-~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vY-g~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
+|+... .+ ..+++++|+.||.|++++|.+. .+++||||+||.++| +.+. ...+++|+++.
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~----~~~~~iV~~SS~~~~~~~~~-----------~~~~~~e~~~~ 145 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNS----KTVKRFIYTSSGSAVSFNGK-----------DKDVLDESDWS 145 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTC----SSCCEEEEEEEGGGTSCSSS-----------CCSEECTTCCC
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccHHHcccCCC-----------CCeecCCcccc
Confidence 997421 12 2348899999999999999875 268999999998754 3210 13467787642
Q ss_pred CC------CCCC-cHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 146 LP------FPNF-YYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 146 ~p------~p~~-~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
.+ .|.. .|+.+|.++| ...+++++++||++||||+.......... .+...+ .+.+..+ ++
T Consensus 146 ~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~-~~~~~~---~g~~~~~-~~- 219 (322)
T 2p4h_X 146 DVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIE-KALVLV---LGKKEQI-GV- 219 (322)
T ss_dssp CHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHH-HHTHHH---HSCGGGC-CE-
T ss_pred chhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHH-HHHHHH---hCCCccC-cC-
Confidence 11 1222 5999998877 23689999999999999975432221110 011111 2332222 22
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHH
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIW 291 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (360)
. . .++++++|+|+++++++..+...|+ || ++++.+|++|+++.+++.++.. + .|...
T Consensus 220 ~---~-~~~i~v~Dva~a~~~~~~~~~~~g~-~~-~~~~~~s~~e~~~~i~~~~~~~-~-----~~~~~----------- 276 (322)
T 2p4h_X 220 T---R-FHMVHVDDVARAHIYLLENSVPGGR-YN-CSPFIVPIEEMSQLLSAKYPEY-Q-----ILTVD----------- 276 (322)
T ss_dssp E---E-EEEEEHHHHHHHHHHHHHSCCCCEE-EE-CCCEEEEHHHHHHHHHHHCTTS-C-----CCCTT-----------
T ss_pred C---C-cCEEEHHHHHHHHHHHhhCcCCCCC-EE-EcCCCCCHHHHHHHHHHhCCCC-C-----CCCCc-----------
Confidence 1 2 2899999999999998876544454 99 5678899999999999876421 1 11110
Q ss_pred HHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCCCC
Q 037566 292 DEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g~i 359 (360)
.+. .... .....+|++|+++|||+|+++++|+|+++++||+++|+|
T Consensus 277 -------~~~--~~~~-------------~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 322 (322)
T 2p4h_X 277 -------ELK--EIKG-------------ARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322 (322)
T ss_dssp -------TTT--TCCC-------------EECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHHHHTCC
T ss_pred -------ccc--CCCC-------------CcceecccHHHHHhCCccCCCHHHHHHHHHHHHHhcCCC
Confidence 000 0000 014578999998799999999999999999999998875
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-32 Score=252.80 Aligned_cols=268 Identities=13% Similarity=0.091 Sum_probs=187.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
|||++|+++|++ +||+|++++|++.. .. +..|- ...+.+++ +|.|+|+|+....
T Consensus 11 fIG~~L~~~L~~------~G~~V~~l~R~~~~-----~~----~~~~~----~~~~~l~~----~d~vihla~~~i~~~~ 67 (298)
T 4b4o_A 11 FIGTALTQLLNA------RGHEVTLVSRKPGP-----GR----ITWDE----LAASGLPS----CDAAVNLAGENILNPL 67 (298)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSCCT-----TE----EEHHH----HHHHCCCS----CSEEEECCCCCSSCTT
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCCCc-----Ce----eecch----hhHhhccC----CCEEEEeccCcccchh
Confidence 689999999999 99999999997642 22 33331 22334555 6899999974211
Q ss_pred ------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCC
Q 037566 78 ------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNF 151 (360)
Q Consensus 78 ------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~ 151 (360)
....++++|+.+|++|++++.+. +.+.++||++||+.+||.. ...+.+|++|.. |..
T Consensus 68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~---~~~~~~~i~~Ss~~vyg~~------------~~~~~~E~~p~~--~~~ 130 (298)
T 4b4o_A 68 RRWNETFQKEVLGSRLETTQLLAKAITKA---PQPPKAWVLVTGVAYYQPS------------LTAEYDEDSPGG--DFD 130 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHC---SSCCSEEEEEEEGGGSCCC------------SSCCBCTTCCCS--CSS
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHh---CCCceEEEEEeeeeeecCC------------CCCcccccCCcc--ccc
Confidence 23467899999999999999876 4456779999999999853 346789999864 455
Q ss_pred cHHHHHHHHh-----cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHH
Q 037566 152 YYAVEDIAAS-----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVL 226 (360)
Q Consensus 152 ~Y~~ek~l~e-----~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dl 226 (360)
+|+..+...| ...+++++++||++||||+.+. +..+ . ... ..+.. ...|++. +.++++|++|+
T Consensus 131 ~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~-~~~~-----~-~~~-~~~~~-~~~g~g~---~~~~~ihv~Dv 198 (298)
T 4b4o_A 131 FFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGA-MGHM-----L-LPF-RLGLG-GPIGSGH---QFFPWIHIGDL 198 (298)
T ss_dssp HHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTSHH-HHHH-----H-HHH-HTTCC-CCBTTSC---SBCCEEEHHHH
T ss_pred hhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCCCc-hhHH-----H-HHH-hcCCc-ceecccC---ceeecCcHHHH
Confidence 6665444333 4578999999999999997532 1111 1 111 13333 3357776 55789999999
Q ss_pred HHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcc
Q 037566 227 AEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKME 306 (360)
Q Consensus 227 a~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 306 (360)
|++++++++++.. +++||+++++++|++|+++.|++.+|.+...+ +|.++.+.+- +..-.
T Consensus 199 a~a~~~~~~~~~~-~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~p---vP~~~~~~~~--g~~~~-------------- 258 (298)
T 4b4o_A 199 AGILTHALEANHV-HGVLNGVAPSSATNAEFAQTFGAALGRRAFIP---LPSAVVQAVF--GRQRA-------------- 258 (298)
T ss_dssp HHHHHHHHHCTTC-CEEEEESCSCCCBHHHHHHHHHHHHTCCCCCC---BCHHHHHHHH--CHHHH--------------
T ss_pred HHHHHHHHhCCCC-CCeEEEECCCccCHHHHHHHHHHHhCcCCccc---CCHHHHHHHh--cchhH--------------
Confidence 9999999887654 46999999999999999999999999765421 2322221110 00000
Q ss_pred cccccchhhhhhccccccccchhHHHHcCCCccc-ccHHHHHHHHH
Q 037566 307 EITCFEALNTVLHLQFQHVSSMNKSREFGFFGFA-DTMKSIRTWVK 351 (360)
Q Consensus 307 ~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~-~~~~~l~~~~~ 351 (360)
+.++. +..++++|++++||++++ +++++|++.++
T Consensus 259 --------~~~l~---~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~ 293 (298)
T 4b4o_A 259 --------IMLLE---GQKVIPRRTLATGYQYSFPELGAALKEIAE 293 (298)
T ss_dssp --------HHHHC---CCCBCCHHHHHTTCCCSCCSHHHHHHHHHH
T ss_pred --------HHhhC---CCEEcHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 00111 345688999999999998 58999998776
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=250.46 Aligned_cols=281 Identities=13% Similarity=0.065 Sum_probs=198.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-C-------CCCCceeeE-eeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-F-------PSSHVDHYI-TFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~-------~~~~v~~~v-~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ +|++|++++|++.... . ...+++ ++ .+|++|++++.+++++ +|+|||+
T Consensus 22 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~~~----~d~vih~ 90 (342)
T 1y1p_A 22 FVASHVVEQLLE------HGYKVRGTARSASKLANLQKRWDAKYPGRFE-TAVVEDMLKQGAYDEVIKG----AAGVAHI 90 (342)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHHHHSTTTEE-EEECSCTTSTTTTTTTTTT----CSEEEEC
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCcccHHHHHHHhhccCCCceE-EEEecCCcChHHHHHHHcC----CCEEEEe
Confidence 589999999999 8999999999743210 0 024688 88 8999999999888876 6899999
Q ss_pred eeecC--CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC----
Q 037566 72 MFQRL--KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR---- 145 (360)
Q Consensus 72 A~~~~--~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~---- 145 (360)
|+... .++..++++|+.||.|++++|.+. .+++||||+||.++||.... + ....|++|++..
T Consensus 91 A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~----~~~~~iv~~SS~~~~~~~~~-----~---~~~~~~~E~~~~~~~~ 158 (342)
T 1y1p_A 91 ASVVSFSNKYDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKP-----N---VEGIYLDEKSWNLESI 158 (342)
T ss_dssp CCCCSCCSCHHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCT-----T---CCCCEECTTCCCHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhC----CCCcEEEEeccHHHhcCCCC-----C---CCCcccCccccCchhh
Confidence 98543 367788999999999999999853 26899999999999964210 0 012568888721
Q ss_pred -------C---CCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchh-HHHHHHHHHHHhhcCCCe
Q 037566 146 -------L---PFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNS-LLTLAVYATICRHQGLPF 205 (360)
Q Consensus 146 -------~---p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~-~~~~~~~~~~~~~~~~~~ 205 (360)
. +.|.+.|+.+|...| ...+++++++||++||||+....... .....+. .+ ..+.++
T Consensus 159 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~-~~--~~~~~~ 235 (342)
T 1y1p_A 159 DKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMM-SL--FNGEVS 235 (342)
T ss_dssp HHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHH-HH--HTTCCC
T ss_pred hhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHH-HH--HcCCCc
Confidence 0 123567999998877 12379999999999999976432110 1111111 11 134554
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHH
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMK 285 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~ 285 (360)
.+.++. ..+++++++|+|++++.++..+...|+.| +++|..+|+.|+++.+++.+|.+.. + ...
T Consensus 236 ~~~~~~----~~~~~v~v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~~~-~-----~~~----- 299 (342)
T 1y1p_A 236 PALALM----PPQYYVSAVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSKTF-P-----ADF----- 299 (342)
T ss_dssp HHHHTC----CSEEEEEHHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTSCC-C-----CCC-----
T ss_pred cccccC----CcCCEeEHHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCccC-C-----CCC-----
Confidence 444443 34689999999999999887655556655 5677889999999999999986511 1 000
Q ss_pred HhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCC---CcccccHHHHHHHHHHHH
Q 037566 286 EKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGF---FGFADTMKSIRTWVKKLR 354 (360)
Q Consensus 286 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~---~p~~~~~~~l~~~~~~~~ 354 (360)
+.. . .....+|++|+++ ||| .+.++++|+|+++++||+
T Consensus 300 ----------------~~~--~-------------~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 300 ----------------PDQ--G-------------QDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp ----------------CCC--C-------------CCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred ----------------Ccc--c-------------cccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 000 0 0124679999987 687 577899999999999985
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-30 Score=256.07 Aligned_cols=273 Identities=12% Similarity=0.069 Sum_probs=185.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
+||++|+++|++ +|++|++++|++.. .+ .+.+|+.|. +.+++++ +|+|||+|+...
T Consensus 158 ~IG~~l~~~L~~------~G~~V~~l~R~~~~-------~~-~v~~d~~~~--~~~~l~~----~D~Vih~A~~~~~~~~ 217 (516)
T 3oh8_A 158 LVGRALTAQLQT------GGHEVIQLVRKEPK-------PG-KRFWDPLNP--ASDLLDG----ADVLVHLAGEPIFGRF 217 (516)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSSCC-------TT-CEECCTTSC--CTTTTTT----CSEEEECCCC-----C
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCCCC-------cc-ceeecccch--hHHhcCC----CCEEEECCCCcccccc
Confidence 589999999999 89999999998653 24 577888764 3455555 689999998531
Q ss_pred --CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHH
Q 037566 77 --KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYA 154 (360)
Q Consensus 77 --~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~ 154 (360)
.++..++++|+.||.||++++.+. .++++|||+||+++||... ...+++|+++. |.++|+
T Consensus 218 ~~~~~~~~~~~Nv~gt~~ll~a~a~~----~~~~r~V~~SS~~vyg~~~-----------~~~~~~E~~~~---~~~~y~ 279 (516)
T 3oh8_A 218 NDSHKEAIRESRVLPTKFLAELVAES----TQCTTMISASAVGFYGHDR-----------GDEILTEESES---GDDFLA 279 (516)
T ss_dssp CGGGHHHHHHHTHHHHHHHHHHHHHC----SSCCEEEEEEEGGGGCSEE-----------EEEEECTTSCC---CSSHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhc----CCCCEEEEeCcceEecCCC-----------CCCccCCCCCC---CcChHH
Confidence 245678899999999999995443 2799999999999998311 23568898875 466788
Q ss_pred HHHHHHh------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHH
Q 037566 155 VEDIAAS------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAE 228 (360)
Q Consensus 155 ~ek~l~e------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~ 228 (360)
..+...| ...|++++|+||++||||+. +....+ ...+ + .+... ..|++. ...++++++|+|+
T Consensus 280 ~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~-~~~~~~-----~~~~-~-~g~~~-~~g~g~---~~~~~i~v~Dva~ 347 (516)
T 3oh8_A 280 EVCRDWEHATAPASDAGKRVAFIRTGVALSGRG-GMLPLL-----KTLF-S-TGLGG-KFGDGT---SWFSWIAIDDLTD 347 (516)
T ss_dssp HHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB-SHHHHH-----HHTT-C----CC-CCTTSC---CEECEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC-ChHHHH-----HHHH-H-hCCCc-ccCCCC---ceEceEeHHHHHH
Confidence 7666555 35689999999999999974 211111 1111 1 23332 456665 5579999999999
Q ss_pred HHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccc
Q 037566 229 QQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEI 308 (360)
Q Consensus 229 a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 308 (360)
+++.++.++. .+++||+++++++|++|+++.+++.+|.+...+ .|.++...+ . + .....
T Consensus 348 ai~~~l~~~~-~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~---~p~~~~~~~----------~---g--~~~~~-- 406 (516)
T 3oh8_A 348 IYYRAIVDAQ-ISGPINAVAPNPVSNADMTKILATSMHRPAFIQ---IPSLGPKIL----------L---G--SQGAE-- 406 (516)
T ss_dssp HHHHHHHCTT-CCEEEEESCSCCEEHHHHHHHTTC---------------------------------------CCGG--
T ss_pred HHHHHHhCcc-cCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCC---CCHHHHHHH----------h---C--CchhH--
Confidence 9999988664 456899999999999999999999999765311 222111000 0 0 00000
Q ss_pred cccchhhhhhccccccccchhHHHHcCCCcccc-cHHHHHHHHHHH
Q 037566 309 TCFEALNTVLHLQFQHVSSMNKSREFGFFGFAD-TMKSIRTWVKKL 353 (360)
Q Consensus 309 ~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~-~~~~l~~~~~~~ 353 (360)
+.++ ....++++|++++||+|+++ ++++|++++++.
T Consensus 407 ------~~~~---~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 407 ------ELAL---ASQRTAPAALENLSHTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp ------GGGG---CEEEECCHHHHHTTCCCSCSSHHHHHHHHHTCC
T ss_pred ------HHhh---cCCeechHHHHHCCCCCCCCCHHHHHHHHhCcc
Confidence 0011 14567889999999999997 999999988653
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-29 Score=230.40 Aligned_cols=269 Identities=13% Similarity=0.113 Sum_probs=186.8
Q ss_pred CchHHHHHHHhcCCCCCCC--CcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGG--PWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~--g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
+||++|+++|++ + |++|++++|++.... +...+++ ++.+|++|++++.+++++ +|+|||+|+...
T Consensus 11 ~iG~~l~~~L~~------~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~D~~d~~~l~~~~~~----~d~vi~~a~~~~- 78 (287)
T 2jl1_A 11 QLGGLVIQHLLK------KVPASQIIAIVRNVEKASTLADQGVE-VRHGDYNQPESLQKAFAG----VSKLLFISGPHY- 78 (287)
T ss_dssp HHHHHHHHHHTT------TSCGGGEEEEESCTTTTHHHHHTTCE-EEECCTTCHHHHHHHTTT----CSEEEECCCCCS-
T ss_pred hHHHHHHHHHHH------hCCCCeEEEEEcCHHHHhHHhhcCCe-EEEeccCCHHHHHHHHhc----CCEEEEcCCCCc-
Confidence 489999999998 7 999999999764421 1124788 999999999999999987 589999998532
Q ss_pred ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHH
Q 037566 78 SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVED 157 (360)
Q Consensus 78 ~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek 157 (360)
. . ++|+.+|.|++++|++. +++||||+||..+|.. | ..|+.+|
T Consensus 79 ~--~--~~n~~~~~~l~~a~~~~-----~~~~~v~~Ss~~~~~~-------------------------~---~~y~~~K 121 (287)
T 2jl1_A 79 D--N--TLLIVQHANVVKAARDA-----GVKHIAYTGYAFAEES-------------------------I---IPLAHVH 121 (287)
T ss_dssp C--H--HHHHHHHHHHHHHHHHT-----TCSEEEEEEETTGGGC-------------------------C---STHHHHH
T ss_pred C--c--hHHHHHHHHHHHHHHHc-----CCCEEEEECCCCCCCC-------------------------C---CchHHHH
Confidence 1 1 67999999999999886 7899999999866521 1 1388888
Q ss_pred HHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHH
Q 037566 158 IAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAA 234 (360)
Q Consensus 158 ~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~ 234 (360)
...| +..+++++++||+.++|+.... .+. ..+. .+.. .. +.+. ...++++++|+|++++.++
T Consensus 122 ~~~E~~~~~~~~~~~ilrp~~~~~~~~~~---~~~-----~~~~--~~~~-~~-~~~~---~~~~~i~~~Dva~~~~~~~ 186 (287)
T 2jl1_A 122 LATEYAIRTTNIPYTFLRNALYTDFFVNE---GLR-----ASTE--SGAI-VT-NAGS---GIVNSVTRNELALAAATVL 186 (287)
T ss_dssp HHHHHHHHHTTCCEEEEEECCBHHHHSSG---GGH-----HHHH--HTEE-EE-SCTT---CCBCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEECCEeccccchh---hHH-----HHhh--CCce-ec-cCCC---CccCccCHHHHHHHHHHHh
Confidence 8877 4579999999999888864211 111 1111 2322 22 2222 4568999999999999998
Q ss_pred cCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchh
Q 037566 235 TTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEAL 314 (360)
Q Consensus 235 ~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 314 (360)
..+...|++||+++++.+|++|+++.+++.+|.+.+. .+.+...+... ....++.......+.. ..
T Consensus 187 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~----~~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~ 252 (287)
T 2jl1_A 187 TEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVH----QPVSFEEEKNF--------LVNAGVPEPFTEITAA--IY 252 (287)
T ss_dssp TSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCCEE----EECCHHHHHHH--------HHHTTCCHHHHHHHHH--HH
T ss_pred cCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcceE----EeCCHHHHHHH--------HHhCCCCHHHHHHHHH--HH
Confidence 7665668999999999999999999999999987542 22332211110 0011111000000000 00
Q ss_pred hhhhccccccccchhHHHH-cCCCcccccHHHHHHHHH
Q 037566 315 NTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVK 351 (360)
Q Consensus 315 d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~ 351 (360)
.. +. .....+|++|+++ +| |.++++|+|+++++
T Consensus 253 ~~-~~-~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 253 DA-IS-KGEASKTSDDLQKLIG--SLTPLKETVKQALK 286 (287)
T ss_dssp HH-HH-TTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred HH-Hh-CCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence 00 00 1145779999987 79 89999999999875
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-29 Score=242.96 Aligned_cols=296 Identities=12% Similarity=0.030 Sum_probs=197.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------------------CCCCCCceeeEeeccCChHHHHHHHccC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------------------WFPSSHVDHYITFDALDSTDTTQKLSSI 61 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------------------~~~~~~v~~~v~gDl~d~~~l~~~l~~~ 61 (360)
+||++|+++|++ +|++|++++|++... .....+++ ++.+|++|++++. ++.+
T Consensus 80 ~iG~~l~~~L~~------~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~-~v~~Dl~d~~~l~-~~~~- 150 (427)
T 4f6c_A 80 FLGAYLIEALQG------YSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIE-VIVGDFECMDDVV-LPEN- 150 (427)
T ss_dssp HHHHHHHHHHTT------TEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEE-EEEECC---CCCC-CSSC-
T ss_pred HHHHHHHHHHHc------CCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceE-EEeCCCCCcccCC-CcCC-
Confidence 489999999988 899999999987510 00125789 9999999988777 4344
Q ss_pred CCCccEEEEeeeecC--CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 62 SQEVTHLFWVMFQRL--KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 62 ~~~v~~V~h~A~~~~--~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|||+|+... .+....+++|+.||.|++++|.+ ++++|||+||.++ |.... + .....++
T Consensus 151 ---~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~------~~~~~v~~SS~~~-G~~~~-----~--~~~~~~~ 213 (427)
T 4f6c_A 151 ---MDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVSTISV-GTYFD-----I--DTEDVTF 213 (427)
T ss_dssp ---CSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH------TTCEEEEEEEGGG-GSEEC-----S--SCSCCEE
T ss_pred ---CCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh------cCCcEEEECchHh-CCCcc-----C--CCCCccc
Confidence 789999998532 35677899999999999999986 4689999999998 64311 1 0135678
Q ss_pred CCCCCCCC-CCCCcHHHHHHHHh------cCCCCcEEEEcCCCeeecCCCCcc--h---hHHHHHHHHHHHhhcCCCeee
Q 037566 140 KEDSLRLP-FPNFYYAVEDIAAS------YSPAVTYSVHRSSIIIGASSRSLN--N---SLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 140 ~E~~p~~p-~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+|+++..+ .|.+.|+.+|..+| ...|++++++||++||||+....+ + ..... +...+. .+.+++.
T Consensus 214 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~ 290 (427)
T 4f6c_A 214 SEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSM-VMNDLL--QLDCIGV 290 (427)
T ss_dssp CTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHH-HHHHHH--HSSEEEH
T ss_pred cccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHH-HHHHHH--hcCCCCC
Confidence 99987543 35778999998887 236899999999999999764321 1 01111 111111 2333332
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHh
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEK 287 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~ 287 (360)
+++. ...++++++|+|++++.++..+. .|++|||++|+++||.|+++.+++ +|.+ ++++..|...+
T Consensus 291 -~~~~---~~~~~v~v~DvA~ai~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g~~--------~~~~~~~~~~l 356 (427)
T 4f6c_A 291 -SMAE---MPVDFSFVDTTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KEIE--------LVSDESFNEIL 356 (427)
T ss_dssp -HHHT---CEECCEEHHHHHHHHHHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SCCE--------EECHHHHHHHH
T ss_pred -cccc---ceEEEeeHHHHHHHHHHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cCCc--------ccCHHHHHHHH
Confidence 2222 56789999999999999987665 789999999999999999999999 6722 22333443322
Q ss_pred hHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHH----HHcCCCcccccHHHHHHHHHHHHH
Q 037566 288 GEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKS----REFGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Ka----r~lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
.+.++.+ +..+. .+... .....+|.+|+ +++||.+....++.+++.++++++
T Consensus 357 --------~~~~~~~--~~~~~----~~~~~--~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~ 412 (427)
T 4f6c_A 357 --------QKQDMYE--TIGLT----SVDRE--QQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT 412 (427)
T ss_dssp --------HHTTCHH--HHHHH----HHHHT--SEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred --------HhcCchh--hhhhh----hcccc--CCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 1112111 00000 00000 12345666655 457999888788899999998876
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-29 Score=248.86 Aligned_cols=299 Identities=11% Similarity=-0.011 Sum_probs=199.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------------------CCCCCCceeeEeeccCChHHHHHHHccC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------------------WFPSSHVDHYITFDALDSTDTTQKLSSI 61 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------------------~~~~~~v~~~v~gDl~d~~~l~~~l~~~ 61 (360)
+||++|+++|++ +|++|++++|++... .....+++ ++.+|++|++.+. +..+
T Consensus 161 ~iG~~l~~~L~~------~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~-~v~~Dl~d~~~l~-~~~~- 231 (508)
T 4f6l_B 161 FLGAYLIEALQG------YSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIE-VIVGDFECMDDVV-LPEN- 231 (508)
T ss_dssp HHHHHHHHHTBT------TEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEE-EEEEBTTBCSSCC-CSSC-
T ss_pred chHHHHHHHHHh------cCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceE-EEecCCcccccCC-CccC-
Confidence 589999999987 899999999987510 00136899 9999999987776 4344
Q ss_pred CCCccEEEEeeeecC--CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 62 SQEVTHLFWVMFQRL--KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 62 ~~~v~~V~h~A~~~~--~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|||+|+... .+...++++|+.||+|++++|.+ ++++|||+||.++ |.... + .....|+
T Consensus 232 ---~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~------~~~~~v~iSS~~v-G~~~~-----~--~~~~~~~ 294 (508)
T 4f6l_B 232 ---MDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVSTISV-GTYFD-----I--DTEDVTF 294 (508)
T ss_dssp ---CSEEEECCCC--------CCHHHHHHHHHHHHHHHHT------TTCEEEEEEESCT-TSEEC-----T--TCSCCEE
T ss_pred ---CCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh------CCCcEEEeCChhh-ccCCc-----c--CCcCccc
Confidence 799999998532 35667889999999999999976 3689999999999 53210 0 0135678
Q ss_pred CCCCCCCC-CCCCcHHHHHHHHh------cCCCCcEEEEcCCCeeecCCCCcchhH-HHHHHHHHHHhh-cCCCeeeeCC
Q 037566 140 KEDSLRLP-FPNFYYAVEDIAAS------YSPAVTYSVHRSSIIIGASSRSLNNSL-LTLAVYATICRH-QGLPFRYLGN 210 (360)
Q Consensus 140 ~E~~p~~p-~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~G~ 210 (360)
+|+++..+ .|.+.|+.+|+.+| ...|++++|+||++||||+....++.- ..-.++..+... .+..++. ++
T Consensus 295 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~ 373 (508)
T 4f6l_B 295 SEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SM 373 (508)
T ss_dssp CTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TG
T ss_pred ccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-Cc
Confidence 89887542 35678999998887 236999999999999999764321100 000001111111 1222222 33
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHH
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEI 290 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
+. ...++++++|+|++++.++..+. .|++|||++++++||.|+++.+++.. .+ ++++..|...+.
T Consensus 374 g~---~~~~~v~v~DvA~ai~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~-~~--------~~~~~~w~~~l~-- 438 (508)
T 4f6l_B 374 AE---MPVDFSFVDTTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE-IE--------LVSDESFNEILQ-- 438 (508)
T ss_dssp GG---SEEECEEHHHHHHHHHHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC-CE--------EECHHHHHHHHH--
T ss_pred cC---ceEEEEcHHHHHHHHHHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC-Cc--------ccCHHHHHHHHH--
Confidence 33 56799999999999999987665 78999999999999999999999865 21 233444443221
Q ss_pred HHHHHHHhCCCccCcccccccchhhhhhccccccccchhHH----HHcCCCcccccHHHHHHHHHHHHH
Q 037566 291 WDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKS----REFGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Ka----r~lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
+.++.+ +.. + ..+... .....+|.+|. +++||.+....++.+++.++|+++
T Consensus 439 ------~~~~~~--~~~---~-~~~~~~--~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~ 493 (508)
T 4f6l_B 439 ------KQDMYE--TIG---L-TSVDRE--QQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT 493 (508)
T ss_dssp ------TTCCHH--HHH---H-HHTGGG--SEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHH
T ss_pred ------hcCCcc--chh---c-cccccc--CcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence 111110 000 0 000000 12345565554 457999888889999999999876
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-28 Score=221.24 Aligned_cols=253 Identities=12% Similarity=0.077 Sum_probs=187.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
+||++|+++|++ |++|++++|++... + -+.+|++|++++.+++++.. +|+|||+|+...
T Consensus 11 ~iG~~l~~~L~~-------g~~V~~~~r~~~~~-------~-~~~~Dl~~~~~~~~~~~~~~--~d~vi~~a~~~~~~~~ 73 (273)
T 2ggs_A 11 QLGIELSRLLSE-------RHEVIKVYNSSEIQ-------G-GYKLDLTDFPRLEDFIIKKR--PDVIINAAAMTDVDKC 73 (273)
T ss_dssp HHHHHHHHHHTT-------TSCEEEEESSSCCT-------T-CEECCTTSHHHHHHHHHHHC--CSEEEECCCCCCHHHH
T ss_pred hhHHHHHHHHhc-------CCeEEEecCCCcCC-------C-CceeccCCHHHHHHHHHhcC--CCEEEECCcccChhhh
Confidence 489999999985 69999999986321 2 27899999999999998753 689999998543
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.+++..+++|+.|+.+++++|.+. ++ |||++||..+|+.. ..+++|+++.. |.+.|+.
T Consensus 74 ~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-~iv~~SS~~~~~~~-------------~~~~~e~~~~~--~~~~Y~~ 132 (273)
T 2ggs_A 74 EIEKEKAYKINAEAVRHIVRAGKVI-----DS-YIVHISTDYVFDGE-------------KGNYKEEDIPN--PINYYGL 132 (273)
T ss_dssp HHCHHHHHHHHTHHHHHHHHHHHHT-----TC-EEEEEEEGGGSCSS-------------SCSBCTTSCCC--CSSHHHH
T ss_pred hhCHHHHHHHhHHHHHHHHHHHHHh-----CC-eEEEEecceeEcCC-------------CCCcCCCCCCC--CCCHHHH
Confidence 256778999999999999999886 55 89999999999742 23788988754 4678999
Q ss_pred HHHHHh--cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHH
Q 037566 156 EDIAAS--YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWA 233 (360)
Q Consensus 156 ek~l~e--~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a 233 (360)
+|...| ... ++++++||+.|||+ .+.... +...+ ..+.++...|+ ..++++++|+|++++.+
T Consensus 133 sK~~~e~~~~~-~~~~~iR~~~v~G~--~~~~~~-----~~~~~--~~~~~~~~~~~------~~~~~~~~dva~~i~~~ 196 (273)
T 2ggs_A 133 SKLLGETFALQ-DDSLIIRTSGIFRN--KGFPIY-----VYKTL--KEGKTVFAFKG------YYSPISARKLASAILEL 196 (273)
T ss_dssp HHHHHHHHHCC-TTCEEEEECCCBSS--SSHHHH-----HHHHH--HTTCCEEEESC------EECCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCeEEEeccccccc--cHHHHH-----HHHHH--HcCCCEEeecC------CCCceEHHHHHHHHHHH
Confidence 999888 223 89999999999983 221111 11111 13555555554 35889999999999998
Q ss_pred HcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccch
Q 037566 234 ATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEA 313 (360)
Q Consensus 234 ~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 313 (360)
+..+. +++||+++ +.+|++|+++.+++.+|.+.+.. .+.++. +....
T Consensus 197 ~~~~~--~g~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~---~~~~~~-----------------~~~~~---------- 243 (273)
T 2ggs_A 197 LELRK--TGIIHVAG-ERISRFELALKIKEKFNLPGEVK---EVDEVR-----------------GWIAK---------- 243 (273)
T ss_dssp HHHTC--CEEEECCC-CCEEHHHHHHHHHHHTTCCSCEE---EESSCT-----------------TCCSC----------
T ss_pred HhcCc--CCeEEECC-CcccHHHHHHHHHHHhCCChhhc---cccccc-----------------ccccC----------
Confidence 87542 56999999 99999999999999999865421 111100 00000
Q ss_pred hhhhhccccccccchhHHHH-cCCCc-ccccHHHH
Q 037566 314 LNTVLHLQFQHVSSMNKSRE-FGFFG-FADTMKSI 346 (360)
Q Consensus 314 ~d~~~~~~~~~~~d~~Kar~-lG~~p-~~~~~~~l 346 (360)
...+..+|++|+++ |||+| .+++++++
T Consensus 244 ------~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 244 ------RPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp ------CCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred ------CCcccccCHHHHHHHhCCCCCCccccccc
Confidence 01246889999987 89999 68998865
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=217.75 Aligned_cols=206 Identities=9% Similarity=0.011 Sum_probs=156.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCChh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSEE 80 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~~ 80 (360)
+||++|+++|++ +|++|++++|++........+++ ++.+|++|++++.+++++ +|+|||+|+....++
T Consensus 15 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~vi~~a~~~~~~~- 82 (227)
T 3dhn_A 15 FVGSALLNEALN------RGFEVTAVVRHPEKIKIENEHLK-VKKADVSSLDEVCEVCKG----ADAVISAFNPGWNNP- 82 (227)
T ss_dssp HHHHHHHHHHHT------TTCEEEEECSCGGGCCCCCTTEE-EECCCTTCHHHHHHHHTT----CSEEEECCCC------
T ss_pred hHHHHHHHHHHH------CCCEEEEEEcCcccchhccCceE-EEEecCCCHHHHHHHhcC----CCEEEEeCcCCCCCh-
Confidence 489999999999 89999999998654322236899 999999999999999997 589999998653333
Q ss_pred HhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 037566 81 INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAA 160 (360)
Q Consensus 81 ~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~ 160 (360)
+++++|+.++.+++++|.+. +++||||+||.++|+.. .....|+.+.. |.+.|+.+|...
T Consensus 83 ~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~~-------------~~~~~~~~~~~--p~~~Y~~sK~~~ 142 (227)
T 3dhn_A 83 DIYDETIKVYLTIIDGVKKA-----GVNRFLMVGGAGSLFIA-------------PGLRLMDSGEV--PENILPGVKALG 142 (227)
T ss_dssp -CCSHHHHHHHHHHHHHHHT-----TCSEEEEECCSTTSEEE-------------TTEEGGGTTCS--CGGGHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCChhhccCC-------------CCCccccCCcc--hHHHHHHHHHHH
Confidence 47899999999999999987 78999999999888642 11224555543 577899988877
Q ss_pred h-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHH
Q 037566 161 S-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWA 233 (360)
Q Consensus 161 e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a 233 (360)
| +..+++++++||++||||++....- +..+......|++ .++++++|+|++++.+
T Consensus 143 e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~------------~~~~~~~~~~~~~------~~~i~~~Dva~ai~~~ 204 (227)
T 3dhn_A 143 EFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRY------------RLGKDDMIVDIVG------NSHISVEDYAAAMIDE 204 (227)
T ss_dssp HHHHHTGGGCCSSEEEEEECCSEEESCCCCCCC------------EEESSBCCCCTTS------CCEEEHHHHHHHHHHH
T ss_pred HHHHHHHhhccCccEEEEeCCcccCCCccccce------------eecCCCcccCCCC------CcEEeHHHHHHHHHHH
Confidence 6 3679999999999999998642110 0011122223332 5889999999999999
Q ss_pred HcCCCCCCCceeccCCCcccHHH
Q 037566 234 ATTDRAKNQAFNCTNGDVFTWKS 256 (360)
Q Consensus 234 ~~~~~~~g~~yni~~g~~~s~~e 256 (360)
+.++...|++||++++++.+|++
T Consensus 205 l~~~~~~g~~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 205 LEHPKHHQERFTIGYLEHHHHHH 227 (227)
T ss_dssp HHSCCCCSEEEEEECCSCCC---
T ss_pred HhCccccCcEEEEEeehhcccCC
Confidence 99988889999999999998863
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-28 Score=237.97 Aligned_cols=319 Identities=13% Similarity=0.051 Sum_probs=206.8
Q ss_pred CchHHHHHHHhcCCCCCCC---CcEEEEEecCCCCC--------CC--------------CCCCceeeEeeccC------
Q 037566 1 MAGLSLAEALKNNPTIPGG---PWKVYGTARRPPPS--------WF--------------PSSHVDHYITFDAL------ 49 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~---g~~V~~l~r~~~~~--------~~--------------~~~~v~~~v~gDl~------ 49 (360)
+||++|+++|++ . |++|++++|++... .+ ...+++ ++.+|++
T Consensus 84 ~IG~~l~~~Ll~------~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-~v~~Dl~~~~~gl 156 (478)
T 4dqv_A 84 FLGRYLVLELLR------RLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLE-VVAGDKSEPDLGL 156 (478)
T ss_dssp HHHHHHHHHHHH------HSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEE-EEECCTTSGGGGC
T ss_pred HHHHHHHHHHHh------cCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceE-EEEeECCCcccCC
Confidence 589999999998 6 89999999976421 00 025789 9999998
Q ss_pred ChHHHHHHHccCCCCccEEEEeeeec-CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcc
Q 037566 50 DSTDTTQKLSSISQEVTHLFWVMFQR-LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSL 128 (360)
Q Consensus 50 d~~~l~~~l~~~~~~v~~V~h~A~~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~ 128 (360)
|.+++.+++++ +|+|||+|+.. ..+..+.+++|+.||.||+++|.+. ++++|||+||.++|+..
T Consensus 157 d~~~~~~~~~~----~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~~~~~V~iSS~~v~~~~------ 221 (478)
T 4dqv_A 157 DQPMWRRLAET----VDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTT-----KLKPFTYVSTADVGAAI------ 221 (478)
T ss_dssp CHHHHHHHHHH----CCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSS-----SCCCEEEEEEGGGGTTS------
T ss_pred CHHHHHHHHcC----CCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEEeehhhcCcc------
Confidence 66678888887 58999999853 2455678899999999999999886 78999999999999853
Q ss_pred cCCcCCCCCCCCCCCCCCC-CC--------CCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCC----CcchhH
Q 037566 129 VGQLIGHDPPFKEDSLRLP-FP--------NFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSR----SLNNSL 188 (360)
Q Consensus 129 ~g~~~~~~~p~~E~~p~~p-~p--------~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~----~~~~~~ 188 (360)
...+++|+.+..| .| .+.|+.+|.++| ...+++++++||++|||++.. +....+
T Consensus 222 ------~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~ 295 (478)
T 4dqv_A 222 ------EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWV 295 (478)
T ss_dssp ------CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHH
T ss_pred ------CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHH
Confidence 2456788876432 11 134999998888 225899999999999998642 222222
Q ss_pred HHHHHHHHHHhhcCC-CeeeeCC---cccccccccccCHHHHHHHHHHHHcC----CCCCCCceeccCCCc--ccHHHHH
Q 037566 189 LTLAVYATICRHQGL-PFRYLGN---KYTWEHFCDMSDSRVLAEQQIWAATT----DRAKNQAFNCTNGDV--FTWKSLW 258 (360)
Q Consensus 189 ~~~~~~~~~~~~~~~-~~~~~G~---~~~~~~~~d~~~v~dla~a~~~a~~~----~~~~g~~yni~~g~~--~s~~el~ 258 (360)
..+ +... ...|. |..++++ +..-....|+++++|+|++++.++.. +...+++||+++++. +||+|++
T Consensus 296 ~~l-~~~~--~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~ 372 (478)
T 4dqv_A 296 TRM-VLSL--MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYV 372 (478)
T ss_dssp HHH-HHHH--HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHH
T ss_pred HHH-HHHH--HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHH
Confidence 111 1111 11232 2222221 11112567999999999999988865 456689999999988 9999999
Q ss_pred HHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHH---HHHHHhCCCccCcccc----cccchhhhhhc-cccccccchhH
Q 037566 259 KLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWD---EIVEKHGLYKTKMEEI----TCFEALNTVLH-LQFQHVSSMNK 330 (360)
Q Consensus 259 ~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~----~~~~~~d~~~~-~~~~~~~d~~K 330 (360)
+.+++. |.+... ..++..|+........ ......++.+ .+... ..| ...+.+ ..-...|....
T Consensus 373 ~~l~~~-g~~~~~-----i~~~~~w~~~l~~~~~~~~~~~~~~~llp-ll~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 443 (478)
T 4dqv_A 373 DWLIEA-GYPIRR-----IDDFAEWLQRFEASLGALPDRQRRHSVLP-MLLASNSQRLQP--LKPTRGCSAPTDRFRAAV 443 (478)
T ss_dssp HHHHHT-TCSCEE-----ESSHHHHHHHHHHHHHTSCHHHHHTSSST-TCC--CCCBCC--------CCSSCCHHHHHHH
T ss_pred HHHHHc-CCCccc-----CCCHHHHHHHHHHHhccCccccccCcchh-HHHHhhccCCCC--CcccccCcchHHHHHHHH
Confidence 999995 765432 2245566654433221 1111222211 11111 011 010011 00012344444
Q ss_pred HHH-cCCCc-----ccccHHHHHHHHHHHHHCCCC
Q 037566 331 SRE-FGFFG-----FADTMKSIRTWVKKLREMKII 359 (360)
Q Consensus 331 ar~-lG~~p-----~~~~~~~l~~~~~~~~~~g~i 359 (360)
.+. .|-.. .....+-|.+.++.+|.-|+|
T Consensus 444 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (478)
T 4dqv_A 444 RAAKVGSDKDNPDIPHVSAPTIINYVTNLQLLGLL 478 (478)
T ss_dssp HHTTCSSCSSSCCCCCCCHHHHHHHHHHHHHTTCC
T ss_pred HHhccCCCcCcccCCCCCHHHHHHHHHHHHhhcCC
Confidence 433 57763 345688899999999988875
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=224.74 Aligned_cols=270 Identities=11% Similarity=0.103 Sum_probs=179.1
Q ss_pred CchHHHHHHHhcCCCCCCC--CcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGG--PWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~--g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
+||++|+++|++ + |++|++++|++.... +...+++ ++.+|++|++++.+++++ +|+|||+|+...
T Consensus 10 ~iG~~l~~~L~~------~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~----~d~vi~~a~~~~- 77 (286)
T 2zcu_A 10 QLGHYVIESLMK------TVPASQIVAIVRNPAKAQALAAQGIT-VRQADYGDEAALTSALQG----VEKLLLISSSEV- 77 (286)
T ss_dssp HHHHHHHHHHTT------TSCGGGEEEEESCTTTCHHHHHTTCE-EEECCTTCHHHHHHHTTT----CSEEEECC-----
T ss_pred hHHHHHHHHHHh------hCCCceEEEEEcChHhhhhhhcCCCe-EEEcCCCCHHHHHHHHhC----CCEEEEeCCCCc-
Confidence 489999999998 7 999999999865421 1124788 999999999999999988 589999997521
Q ss_pred ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHH
Q 037566 78 SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVED 157 (360)
Q Consensus 78 ~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek 157 (360)
..|+.+|+|++++|.+. +++|||++||..+|.. | ..|+.+|
T Consensus 78 ------~~~~~~~~~l~~a~~~~-----~~~~~v~~Ss~~~~~~-------------------------~---~~y~~sK 118 (286)
T 2zcu_A 78 ------GQRAPQHRNVINAAKAA-----GVKFIAYTSLLHADTS-------------------------P---LGLADEH 118 (286)
T ss_dssp ----------CHHHHHHHHHHHH-----TCCEEEEEEETTTTTC-------------------------C---STTHHHH
T ss_pred ------hHHHHHHHHHHHHHHHc-----CCCEEEEECCCCCCCC-------------------------c---chhHHHH
Confidence 25899999999999987 7899999998765410 1 1378788
Q ss_pred HHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHH
Q 037566 158 IAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAA 234 (360)
Q Consensus 158 ~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~ 234 (360)
...| +..+++++++||+.++|+.. ... ...+ + .+ ++. .+++. ...++++++|+|++++.++
T Consensus 119 ~~~e~~~~~~~~~~~ilrp~~~~~~~~----~~~-----~~~~-~-~~-~~~-~~~~~---~~~~~i~~~Dva~~~~~~~ 182 (286)
T 2zcu_A 119 IETEKMLADSGIVYTLLRNGWYSENYL----ASA-----PAAL-E-HG-VFI-GAAGD---GKIASATRADYAAAAARVI 182 (286)
T ss_dssp HHHHHHHHHHCSEEEEEEECCBHHHHH----TTH-----HHHH-H-HT-EEE-ESCTT---CCBCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEeChHHhhhhH----HHh-----HHhh-c-CC-cee-ccCCC---CccccccHHHHHHHHHHHh
Confidence 7777 34689999999976655421 111 1111 1 22 233 33333 4578999999999999998
Q ss_pred cCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchh
Q 037566 235 TTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEAL 314 (360)
Q Consensus 235 ~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 314 (360)
.++...|++|||++++.+|++|+++.+++.+|.+... .+.+...+.... ...++.......+. ...
T Consensus 183 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~----~~~~~~~~~~~~--------~~~~~~~~~~~~~~--~~~ 248 (286)
T 2zcu_A 183 SEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTY----QNLSEADFAAAL--------KSVGLPDGLADMLA--DSD 248 (286)
T ss_dssp HSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEE----EECCHHHHHHHH--------TTSSCCHHHHHHHH--HHH
T ss_pred cCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCce----eeCCHHHHHHHH--------HHcCCCHHHHHHHH--HHH
Confidence 7765678999999999999999999999999986542 223322111100 00011000000000 000
Q ss_pred hhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHH
Q 037566 315 NTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLR 354 (360)
Q Consensus 315 d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~ 354 (360)
.. +. .....+|++|+++ +|| |.++++|+|+++++||.
T Consensus 249 ~~-~~-~~~~~~~~~~~~~~lg~-~~~~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 249 VG-AS-KGGLFDDSKTLSKLIGH-PTTTLAESVSHLFNVNN 286 (286)
T ss_dssp HH-HH-TTTTCCCCCHHHHHHTS-CCCCHHHHHHGGGC---
T ss_pred HH-Hh-CCCCccCchHHHHHhCc-CCCCHHHHHHHHHhhcC
Confidence 00 00 1124678999987 797 68899999999999873
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=205.16 Aligned_cols=188 Identities=7% Similarity=-0.032 Sum_probs=148.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC-CCh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-KSE 79 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-~~~ 79 (360)
+||++|+++|++ +|++|++++|++.... ..+++ ++.+|++|++++.+++++ +|+|||+|+... .+.
T Consensus 13 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~~--~~~~~-~~~~Dl~d~~~~~~~~~~----~d~vi~~a~~~~~~~~ 79 (267)
T 3ay3_A 13 GVGSAIRPHLGT------LAHEVRLSDIVDLGAA--EAHEE-IVACDLADAQAVHDLVKD----CDGIIHLGGVSVERPW 79 (267)
T ss_dssp HHHHHHGGGGGG------TEEEEEECCSSCCCCC--CTTEE-ECCCCTTCHHHHHHHHTT----CSEEEECCSCCSCCCH
T ss_pred HHHHHHHHHHHh------CCCEEEEEeCCCcccc--CCCcc-EEEccCCCHHHHHHHHcC----CCEEEECCcCCCCCCH
Confidence 489999999999 8999999999865421 35688 999999999999999987 589999998643 356
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA 159 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l 159 (360)
...+++|+.|+.+++++|.+. +++||||+||..+||... ...|++|++|.. |.+.|+.+|..
T Consensus 80 ~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~~~~~~~-----------~~~~~~E~~~~~--~~~~Y~~sK~~ 141 (267)
T 3ay3_A 80 NDILQANIIGAYNLYEAARNL-----GKPRIVFASSNHTIGYYP-----------RTTRIDTEVPRR--PDSLYGLSKCF 141 (267)
T ss_dssp HHHHHHTHHHHHHHHHHHHHT-----TCCEEEEEEEGGGSTTSB-----------TTSCBCTTSCCC--CCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCCHHHhCCCC-----------CCCCCCCCCCCC--CCChHHHHHHH
Confidence 778999999999999999886 789999999999998521 246789998864 46779988887
Q ss_pred Hh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHH
Q 037566 160 AS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIW 232 (360)
Q Consensus 160 ~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~ 232 (360)
.| ...+++++++||+++|+. +.+ +. ...++++++|+|++++.
T Consensus 142 ~e~~~~~~~~~~gi~~~~lrp~~v~~~-~~~---------------------------~~---~~~~~~~~~dva~~~~~ 190 (267)
T 3ay3_A 142 GEDLASLYYHKFDIETLNIRIGSCFPK-PKD---------------------------AR---MMATWLSVDDFMRLMKR 190 (267)
T ss_dssp HHHHHHHHHHTTCCCEEEEEECBCSSS-CCS---------------------------HH---HHHHBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeceeecCC-CCC---------------------------CC---eeeccccHHHHHHHHHH
Confidence 76 356899999999999941 110 00 22467899999999999
Q ss_pred HHcCCCCCCCceeccCCC
Q 037566 233 AATTDRAKNQAFNCTNGD 250 (360)
Q Consensus 233 a~~~~~~~g~~yni~~g~ 250 (360)
++..+...+++||+.++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~ 208 (267)
T 3ay3_A 191 AFVAPKLGCTVVYGASAN 208 (267)
T ss_dssp HHHSSCCCEEEEEECCSC
T ss_pred HHhCCCCCceeEecCCCc
Confidence 887654445677775543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=198.75 Aligned_cols=194 Identities=13% Similarity=0.103 Sum_probs=155.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCC-hHHHHHHHccCCCCccEEEEeeeecCCCh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALD-STDTTQKLSSISQEVTHLFWVMFQRLKSE 79 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d-~~~l~~~l~~~~~~v~~V~h~A~~~~~~~ 79 (360)
+||++|+++|++ +|++|++++|++.... ...+++ ++.+|++| ++++.+++++ +|+|||+|+....
T Consensus 11 ~iG~~l~~~L~~------~g~~V~~~~R~~~~~~-~~~~~~-~~~~D~~d~~~~~~~~~~~----~d~vi~~ag~~~~-- 76 (219)
T 3dqp_A 11 RVGKSLLKSLST------TDYQIYAGARKVEQVP-QYNNVK-AVHFDVDWTPEEMAKQLHG----MDAIINVSGSGGK-- 76 (219)
T ss_dssp HHHHHHHHHHTT------SSCEEEEEESSGGGSC-CCTTEE-EEECCTTSCHHHHHTTTTT----CSEEEECCCCTTS--
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCccchh-hcCCce-EEEecccCCHHHHHHHHcC----CCEEEECCcCCCC--
Confidence 489999999999 8999999999865432 126899 99999999 9999999987 5899999986542
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA 159 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l 159 (360)
+.+++|+.|+.+++++|++. +++|||++||..+|+. .+.+| .+ +.|.+.|+.+|..
T Consensus 77 -~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~~~~~---------------~~~~e-~~--~~~~~~Y~~sK~~ 132 (219)
T 3dqp_A 77 -SLLKVDLYGAVKLMQAAEKA-----EVKRFILLSTIFSLQP---------------EKWIG-AG--FDALKDYYIAKHF 132 (219)
T ss_dssp -SCCCCCCHHHHHHHHHHHHT-----TCCEEEEECCTTTTCG---------------GGCCS-HH--HHHTHHHHHHHHH
T ss_pred -CcEeEeHHHHHHHHHHHHHh-----CCCEEEEECcccccCC---------------Ccccc-cc--cccccHHHHHHHH
Confidence 47899999999999999886 7899999999866642 23445 22 2346679999988
Q ss_pred Hh----cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHc
Q 037566 160 AS----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAAT 235 (360)
Q Consensus 160 ~e----~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~ 235 (360)
.| +..+++++++||+++||+.....+ . .|+ ...++++++|+|++++.++.
T Consensus 133 ~e~~~~~~~~i~~~ilrp~~v~g~~~~~~~--------------------~-~~~-----~~~~~i~~~Dva~~i~~~l~ 186 (219)
T 3dqp_A 133 ADLYLTKETNLDYTIIQPGALTEEEATGLI--------------------D-IND-----EVSASNTIGDVADTIKELVM 186 (219)
T ss_dssp HHHHHHHSCCCEEEEEEECSEECSCCCSEE--------------------E-ESS-----SCCCCEEHHHHHHHHHHHHT
T ss_pred HHHHHHhccCCcEEEEeCceEecCCCCCcc--------------------c-cCC-----CcCCcccHHHHHHHHHHHHh
Confidence 77 467999999999999998543211 1 122 44688999999999999998
Q ss_pred CCCCCCCceeccCCCcccHHHHHH
Q 037566 236 TDRAKNQAFNCTNGDVFTWKSLWK 259 (360)
Q Consensus 236 ~~~~~g~~yni~~g~~~s~~el~~ 259 (360)
.+...|++|||++|. .+++|++.
T Consensus 187 ~~~~~g~~~~i~~g~-~~~~e~~~ 209 (219)
T 3dqp_A 187 TDHSIGKVISMHNGK-TAIKEALE 209 (219)
T ss_dssp CGGGTTEEEEEEECS-EEHHHHHH
T ss_pred CccccCcEEEeCCCC-ccHHHHHH
Confidence 776669999998886 89998875
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=211.07 Aligned_cols=213 Identities=8% Similarity=-0.022 Sum_probs=164.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+||++|+++|++ .|++|++++|++... .+...+++ ++.+|++|++++.++++..+ +|+|||+|
T Consensus 21 ~iG~~l~~~L~~------~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~-~~~~Dl~d~~~l~~~~~~~~--~d~Vi~~a 91 (346)
T 3i6i_A 21 FIGQFVATASLD------AHRPTYILARPGPRSPSKAKIFKALEDKGAI-IVYGLINEQEAMEKILKEHE--IDIVVSTV 91 (346)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEECSSCCCHHHHHHHHHHHHTTCE-EEECCTTCHHHHHHHHHHTT--CCEEEECC
T ss_pred HHHHHHHHHHHH------CCCCEEEEECCCCCChhHHHHHHHHHhCCcE-EEEeecCCHHHHHHHHhhCC--CCEEEECC
Confidence 489999999999 899999999986321 01135789 99999999999999999332 68999998
Q ss_pred eecCCChhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCC
Q 037566 73 FQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNF 151 (360)
Q Consensus 73 ~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~ 151 (360)
+. .|+.++.||+++|+++ + ++|||+ | +||. +.+|+.+.. |..
T Consensus 92 ~~----------~n~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~----------------~~~e~~~~~--p~~ 134 (346)
T 3i6i_A 92 GG----------ESILDQIALVKAMKAV-----GTIKRFLP-S---EFGH----------------DVNRADPVE--PGL 134 (346)
T ss_dssp CG----------GGGGGHHHHHHHHHHH-----CCCSEEEC-S---CCSS----------------CTTTCCCCT--THH
T ss_pred ch----------hhHHHHHHHHHHHHHc-----CCceEEee-c---ccCC----------------CCCccCcCC--Ccc
Confidence 75 3899999999999987 6 999996 3 4653 245666543 456
Q ss_pred cHHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHH
Q 037566 152 YYAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAE 228 (360)
Q Consensus 152 ~Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~ 228 (360)
.|+.+|...| +..+++++++||+.+||.......... .....+..+.++|++. ...++++++|+|+
T Consensus 135 ~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~~~~~~~~~--------~~~~~~~~~~~~g~g~---~~~~~i~~~Dva~ 203 (346)
T 3i6i_A 135 NMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPS--------EVLPPTDFFQIYGDGN---VKAYFVAGTDIGK 203 (346)
T ss_dssp HHHHHHHHHHHHHHHTTCCBEEEECCEESSCCCSCC-------------CCCCSSCEEEETTSC---CCEEEECHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCCCEEEEEecccccccCccccccc--------cccCCCceEEEccCCC---ceEEecCHHHHHH
Confidence 6888888877 457999999999999997532221110 0001234566778775 5678999999999
Q ss_pred HHHHHHcCCCCCCCceeccC-CCcccHHHHHHHHHHHhCCCcc
Q 037566 229 QQIWAATTDRAKNQAFNCTN-GDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 229 a~~~a~~~~~~~g~~yni~~-g~~~s~~el~~~ia~~~g~~~~ 270 (360)
+++.++..+...|++||+++ |+.+|++|+++.+++.+|.+..
T Consensus 204 ~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~ 246 (346)
T 3i6i_A 204 FTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLP 246 (346)
T ss_dssp HHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCc
Confidence 99999887766689999984 6899999999999999998754
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.3e-25 Score=194.29 Aligned_cols=205 Identities=11% Similarity=0.006 Sum_probs=147.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCCh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSE 79 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~ 79 (360)
+||++|+++|++ +|++|++++|++... .+...+++ ++.+|++|+++ +++++ +|+|||+|+.....
T Consensus 11 ~iG~~l~~~L~~------~g~~V~~~~R~~~~~~~~~~~~~~-~~~~D~~d~~~--~~~~~----~d~vi~~ag~~~~~- 76 (224)
T 3h2s_A 11 RAGSAIVAEARR------RGHEVLAVVRDPQKAADRLGATVA-TLVKEPLVLTE--ADLDS----VDAVVDALSVPWGS- 76 (224)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESCHHHHHHHTCTTSE-EEECCGGGCCH--HHHTT----CSEEEECCCCCTTS-
T ss_pred HHHHHHHHHHHH------CCCEEEEEEecccccccccCCCce-EEecccccccH--hhccc----CCEEEECCccCCCc-
Confidence 489999999999 899999999986432 11236789 99999999988 77777 58999999864221
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA 159 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l 159 (360)
...++|+.++++++++|++. + +|||++||+++|.... +. ...+.+|... |.|.++|+.+|..
T Consensus 77 -~~~~~n~~~~~~l~~a~~~~-----~-~~~v~~SS~~~~~~~~------~~---~~~~~~~~~~--~~~~~~y~~sK~~ 138 (224)
T 3h2s_A 77 -GRGYLHLDFATHLVSLLRNS-----D-TLAVFILGSASLAMPG------AD---HPMILDFPES--AASQPWYDGALYQ 138 (224)
T ss_dssp -SCTHHHHHHHHHHHHTCTTC-----C-CEEEEECCGGGSBCTT------CS---SCGGGGCCGG--GGGSTTHHHHHHH
T ss_pred -chhhHHHHHHHHHHHHHHHc-----C-CcEEEEecceeeccCC------CC---ccccccCCCC--CccchhhHHHHHH
Confidence 24578999999999999886 6 8999999976654321 10 1123444443 3346779988887
Q ss_pred Hh------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHH
Q 037566 160 AS------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWA 233 (360)
Q Consensus 160 ~e------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a 233 (360)
.| +..+++++++||+.+|||++...+. .....+.+.+ ...++++++|+|++++.+
T Consensus 139 ~e~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~-------------~~~~~~~~~~------~~~~~i~~~DvA~~~~~~ 199 (224)
T 3h2s_A 139 YYEYQFLQMNANVNWIGISPSEAFPSGPATSYV-------------AGKDTLLVGE------DGQSHITTGNMALAILDQ 199 (224)
T ss_dssp HHHHHHHTTCTTSCEEEEEECSBCCCCCCCCEE-------------EESSBCCCCT------TSCCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEcCccccCCCcccCce-------------ecccccccCC------CCCceEeHHHHHHHHHHH
Confidence 66 3679999999999999996532211 0122222222 235789999999999999
Q ss_pred HcCCCCCCCceeccCCCcccHHH
Q 037566 234 ATTDRAKNQAFNCTNGDVFTWKS 256 (360)
Q Consensus 234 ~~~~~~~g~~yni~~g~~~s~~e 256 (360)
+.++...|++||+++-+..++.+
T Consensus 200 l~~~~~~g~~~~~~~~~~~~~~~ 222 (224)
T 3h2s_A 200 LEHPTAIRDRIVVRDADLEHHHH 222 (224)
T ss_dssp HHSCCCTTSEEEEEECC------
T ss_pred hcCccccCCEEEEecCcchhccc
Confidence 99888889999999888776653
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-24 Score=203.59 Aligned_cols=211 Identities=13% Similarity=0.043 Sum_probs=160.6
Q ss_pred CchHHHHHHHhcCCCCCCC-Cc-EEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGG-PW-KVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~-g~-~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
+||++|+++|++ + |+ +|++++|++... .+...+++ ++.+|++|++++.+++++ +|+|||+|+
T Consensus 32 ~iG~~l~~~L~~------~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~-~~~~Dl~d~~~l~~~~~~----~D~Vih~Aa 100 (344)
T 2gn4_A 32 SFGKCFVRKVLD------TTNAKKIIVYSRDELKQSEMAMEFNDPRMR-FFIGDVRDLERLNYALEG----VDICIHAAA 100 (344)
T ss_dssp HHHHHHHHHHHH------HCCCSEEEEEESCHHHHHHHHHHHCCTTEE-EEECCTTCHHHHHHHTTT----CSEEEECCC
T ss_pred HHHHHHHHHHHh------hCCCCEEEEEECChhhHHHHHHHhcCCCEE-EEECCCCCHHHHHHHHhc----CCEEEECCC
Confidence 489999999999 8 97 999999975321 01135789 999999999999999987 589999998
Q ss_pred ecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 74 QRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 74 ~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
... .++.+.+++|+.||.|++++|.+. +++|||++||.++|.
T Consensus 101 ~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-----~v~~~V~~SS~~~~~---------------------------- 147 (344)
T 2gn4_A 101 LKHVPIAEYNPLECIKTNIMGASNVINACLKN-----AISQVIALSTDKAAN---------------------------- 147 (344)
T ss_dssp CCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEECCGGGSS----------------------------
T ss_pred CCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEecCCccCC----------------------------
Confidence 543 256788999999999999999987 799999999865331
Q ss_pred CCCcHHHHHHHHh------c----CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCC-CeeeeCCccccccc
Q 037566 149 PNFYYAVEDIAAS------Y----SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGL-PFRYLGNKYTWEHF 217 (360)
Q Consensus 149 p~~~Y~~ek~l~e------~----~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~~ 217 (360)
|.+.|+.+|...| . ..+++++++||++||||+. +..+ ..+ ..+ + .|. ++++. ++. ..
T Consensus 148 p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~-~~i~----~~~-~~~-~-~g~~~~~i~-~~~---~~ 215 (344)
T 2gn4_A 148 PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG-SVVP----FFK-KLV-Q-NKASEIPIT-DIR---MT 215 (344)
T ss_dssp CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT-SHHH----HHH-HHH-H-HTCCCEEES-CTT---CE
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC-CHHH----HHH-HHH-H-cCCCceEEe-CCC---eE
Confidence 2345999888877 1 2579999999999999864 2111 111 112 1 355 66553 333 45
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCc
Q 037566 218 CDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEF 269 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~ 269 (360)
+++++++|+|++++.++..+ ..|++||++++ .+|+.|+++.+++.++.+.
T Consensus 216 r~~i~v~D~a~~v~~~l~~~-~~g~~~~~~~~-~~s~~el~~~i~~~~~~~~ 265 (344)
T 2gn4_A 216 RFWITLDEGVSFVLKSLKRM-HGGEIFVPKIP-SMKMTDLAKALAPNTPTKI 265 (344)
T ss_dssp EEEECHHHHHHHHHHHHHHC-CSSCEEEECCC-EEEHHHHHHHHCTTCCEEE
T ss_pred EeeEEHHHHHHHHHHHHhhc-cCCCEEecCCC-cEEHHHHHHHHHHhCCeeE
Confidence 68899999999999988754 45899998765 6999999999998765543
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=196.16 Aligned_cols=205 Identities=8% Similarity=-0.054 Sum_probs=163.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC-CCh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-KSE 79 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-~~~ 79 (360)
+||++|+++|++ +|++|++++|++.... ..+++ ++.+|++|++++.+++++ +|+|||+|+... .+.
T Consensus 14 ~IG~~la~~L~~------~G~~V~~~~r~~~~~~--~~~~~-~~~~Dl~d~~~~~~~~~~----~D~vi~~Ag~~~~~~~ 80 (267)
T 3rft_A 14 QLGRVMRERLAP------MAEILRLADLSPLDPA--GPNEE-CVQCDLADANAVNAMVAG----CDGIVHLGGISVEKPF 80 (267)
T ss_dssp HHHHHHHHHTGG------GEEEEEEEESSCCCCC--CTTEE-EEECCTTCHHHHHHHHTT----CSEEEECCSCCSCCCH
T ss_pred HHHHHHHHHHHh------cCCEEEEEecCCcccc--CCCCE-EEEcCCCCHHHHHHHHcC----CCEEEECCCCcCcCCH
Confidence 489999999999 8999999999875432 46789 999999999999999997 589999998643 466
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA 159 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l 159 (360)
+.++++|+.||.+++++|++. +++|||++||..+||... ...+++|+.+.. |.+.|+.+|..
T Consensus 81 ~~~~~~N~~g~~~l~~a~~~~-----~~~~iv~~SS~~~~g~~~-----------~~~~~~e~~~~~--~~~~Y~~sK~~ 142 (267)
T 3rft_A 81 EQILQGNIIGLYNLYEAARAH-----GQPRIVFASSNHTIGYYP-----------QTERLGPDVPAR--PDGLYGVSKCF 142 (267)
T ss_dssp HHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGTTSB-----------TTSCBCTTSCCC--CCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcchHHhCCCC-----------CCCCCCCCCCCC--CCChHHHHHHH
Confidence 788999999999999999886 789999999999998531 345788988754 46789999987
Q ss_pred Hh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHH
Q 037566 160 AS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIW 232 (360)
Q Consensus 160 ~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~ 232 (360)
.| ...+++++++||++|||+... .. ...++++++|+++++..
T Consensus 143 ~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~----------------------------~~---~~~~~~~~~d~a~~~~~ 191 (267)
T 3rft_A 143 GENLARMYFDKFGQETALVRIGSCTPEPNN----------------------------YR---MLSTWFSHDDFVSLIEA 191 (267)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECBCSSSCCS----------------------------TT---HHHHBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCeEEEEEeecccCCCCC----------------------------CC---ceeeEEcHHHHHHHHHH
Confidence 77 246899999999999986211 00 22356789999999988
Q ss_pred HHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCc
Q 037566 233 AATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEF 269 (360)
Q Consensus 233 a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~ 269 (360)
++..+...+.+|++.++++.+|.++.. ++.+|.++
T Consensus 192 ~~~~~~~~~~~~~~~s~~~~~~~~~~~--~~~~g~~p 226 (267)
T 3rft_A 192 VFRAPVLGCPVVWGASANDAGWWDNSH--LGFLGWKP 226 (267)
T ss_dssp HHHCSCCCSCEEEECCCCTTCCBCCGG--GGGGCCCC
T ss_pred HHhCCCCCceEEEEeCCCCCCcccChh--HHHCCCCC
Confidence 887665556788888888888777633 36677643
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-25 Score=194.06 Aligned_cols=203 Identities=13% Similarity=0.061 Sum_probs=129.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCChh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSEE 80 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~~ 80 (360)
+||++|+++|++ +|++|++++|++.......++++ ++.+|++|+++ +++++ +|+|||+|+...
T Consensus 11 ~iG~~l~~~L~~------~g~~V~~~~R~~~~~~~~~~~~~-~~~~D~~d~~~--~~~~~----~d~vi~~ag~~~---- 73 (221)
T 3ew7_A 11 RAGSRILEEAKN------RGHEVTAIVRNAGKITQTHKDIN-ILQKDIFDLTL--SDLSD----QNVVVDAYGISP---- 73 (221)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESCSHHHHHHCSSSE-EEECCGGGCCH--HHHTT----CSEEEECCCSST----
T ss_pred hhHHHHHHHHHh------CCCEEEEEEcCchhhhhccCCCe-EEeccccChhh--hhhcC----CCEEEECCcCCc----
Confidence 489999999999 89999999998643210016789 99999999987 77777 589999998633
Q ss_pred HhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 037566 81 INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAA 160 (360)
Q Consensus 81 ~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~ 160 (360)
...++|+.++++++++|++. +++|||++||..+|.... ...+..|+.+.. |.++|+.+|...
T Consensus 74 ~~~~~~~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~~~~~~~--~~~~y~~~k~~~ 135 (221)
T 3ew7_A 74 DEAEKHVTSLDHLISVLNGT-----VSPRLLVVGGAASLQIDE-----------DGNTLLESKGLR--EAPYYPTARAQA 135 (221)
T ss_dssp TTTTSHHHHHHHHHHHHCSC-----CSSEEEEECCCC--------------------------------CCCSCCHHHHH
T ss_pred cccchHHHHHHHHHHHHHhc-----CCceEEEEecceEEEcCC-----------CCccccccCCCC--CHHHHHHHHHHH
Confidence 23678999999999999886 689999999987664321 123556766644 345566555544
Q ss_pred h-----c--CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHH
Q 037566 161 S-----Y--SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWA 233 (360)
Q Consensus 161 e-----~--~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a 233 (360)
| . ..+++++++||+++|||++.. .. +. ..+.++.+.+++. ++++++|+|++++.+
T Consensus 136 e~~~~~~~~~~gi~~~ivrp~~v~g~~~~~--~~------~~----~~~~~~~~~~~~~------~~i~~~Dva~~~~~~ 197 (221)
T 3ew7_A 136 KQLEHLKSHQAEFSWTYISPSAMFEPGERT--GD------YQ----IGKDHLLFGSDGN------SFISMEDYAIAVLDE 197 (221)
T ss_dssp HHHHHHHTTTTTSCEEEEECSSCCCCC---------------------------------------CCCHHHHHHHHHHH
T ss_pred HHHHHHHhhccCccEEEEeCcceecCCCcc--Cc------eE----eccccceecCCCC------ceEeHHHHHHHHHHH
Confidence 4 2 689999999999999985421 10 10 0122333444432 578899999999999
Q ss_pred HcCCCCCCCceeccCCCcccHHH
Q 037566 234 ATTDRAKNQAFNCTNGDVFTWKS 256 (360)
Q Consensus 234 ~~~~~~~g~~yni~~g~~~s~~e 256 (360)
+.++...|++||+++..+.+.+|
T Consensus 198 l~~~~~~g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 198 IERPNHLNEHFTVAGKLEHHHHH 220 (221)
T ss_dssp HHSCSCTTSEEECCC--------
T ss_pred HhCccccCCEEEECCCCcccccc
Confidence 99888889999999988776654
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=205.50 Aligned_cols=200 Identities=11% Similarity=0.084 Sum_probs=153.6
Q ss_pred CchHHHHHHHhcCCCCCCCCc-EEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC-CC
Q 037566 1 MAGLSLAEALKNNPTIPGGPW-KVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-KS 78 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~-~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-~~ 78 (360)
+||++|+++|++ +|+ +|++++|+ +|++++.+++++ +|+|||+|+... .+
T Consensus 11 ~iG~~l~~~L~~------~g~~~v~~~d~~-------------------~d~~~l~~~~~~----~d~Vih~a~~~~~~~ 61 (369)
T 3st7_A 11 FVGKNLKADLTS------TTDHHIFEVHRQ-------------------TKEEELESALLK----ADFIVHLAGVNRPEH 61 (369)
T ss_dssp HHHHHHHHHHHH------HCCCEEEECCTT-------------------CCHHHHHHHHHH----CSEEEECCCSBCTTC
T ss_pred HHHHHHHHHHHh------CCCCEEEEECCC-------------------CCHHHHHHHhcc----CCEEEECCcCCCCCC
Confidence 489999999999 787 55554442 678889999998 589999998543 35
Q ss_pred hhHhhhhhHHHHHHHHHHHHhhccCCCCcc-EEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHH
Q 037566 79 EEINISNNSTMFKNVMSVVVDSNKGRSRLR-HVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVED 157 (360)
Q Consensus 79 ~~~~~~vNv~gt~nll~a~~~~~~~~~~v~-r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek 157 (360)
+.+++++|+.+|.||+++|++. +++ ||||+||..+|+ .+.|+.+|
T Consensus 62 ~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~v~~Ss~~~~~-----------------------------~~~Y~~sK 107 (369)
T 3st7_A 62 DKEFSLGNVSYLDHVLDILTRN-----TKKPAILLSSSIQATQ-----------------------------DNPYGESK 107 (369)
T ss_dssp STTCSSSCCBHHHHHHHHHTTC-----SSCCEEEEEEEGGGGS-----------------------------CSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----CCCCeEEEeCchhhcC-----------------------------CCCchHHH
Confidence 6778899999999999999886 676 999999987763 12388888
Q ss_pred HHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHH
Q 037566 158 IAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQ 230 (360)
Q Consensus 158 ~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~ 230 (360)
..+| +..+++++++||++||||+....++......+. .+. .+.++.+ +++. ...++++++|+|+++
T Consensus 108 ~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~-~~~--~~~~~~~-~~~~---~~~~~i~v~Dva~~~ 180 (369)
T 3st7_A 108 LQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCY-KIA--RNEEIQV-NDRN---VELTLNYVDDIVAEI 180 (369)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHH-HHH--TTCCCCC-SCTT---CEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHH-HHH--cCCCeEe-cCCC---eEEEEEEHHHHHHHH
Confidence 7777 236899999999999999764322222221111 121 3455444 3443 557999999999999
Q ss_pred HHHHcCCCCC-CCceeccCCCcccHHHHHHHHHHHhCCCcc
Q 037566 231 IWAATTDRAK-NQAFNCTNGDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 231 ~~a~~~~~~~-g~~yni~~g~~~s~~el~~~ia~~~g~~~~ 270 (360)
+.++..+... |++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 181 ~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~~ 221 (369)
T 3st7_A 181 KRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLD 221 (369)
T ss_dssp HHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCCCcc
Confidence 9999876554 899999999999999999999999998654
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=195.20 Aligned_cols=213 Identities=16% Similarity=0.074 Sum_probs=155.9
Q ss_pred CchHHHHHHHhcCCCCCCC--CcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC-
Q 037566 1 MAGLSLAEALKNNPTIPGG--PWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~--g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~- 77 (360)
+||++|+++|++ + |++|++++|++........+++ ++.+|++|++++.+++++ +|+|||+|+....
T Consensus 15 ~iG~~l~~~l~~------~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~----~d~vi~~a~~~~~~ 83 (253)
T 1xq6_A 15 RTGQIVYKKLKE------GSDKFVAKGLVRSAQGKEKIGGEAD-VFIGDITDADSINPAFQG----IDALVILTSAVPKM 83 (253)
T ss_dssp HHHHHHHHHHHH------TTTTCEEEEEESCHHHHHHTTCCTT-EEECCTTSHHHHHHHHTT----CSEEEECCCCCCEE
T ss_pred HHHHHHHHHHHh------cCCCcEEEEEEcCCCchhhcCCCee-EEEecCCCHHHHHHHHcC----CCEEEEeccccccc
Confidence 489999999999 7 8999999997532100135688 999999999999999987 5899999985321
Q ss_pred ----------Ch-------hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 78 ----------SE-------EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 78 ----------~~-------~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
++ ...+++|+.++.+++++|++. +++|||++||..+|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~------------------- 139 (253)
T 1xq6_A 84 KPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVKHIVVVGSMGGTNP------------------- 139 (253)
T ss_dssp CTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCSEEEEEEETTTTCT-------------------
T ss_pred cccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-----CCCEEEEEcCccCCCC-------------------
Confidence 11 135789999999999999987 6899999999865421
Q ss_pred CCCCCCCCCCCcHHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
..|..+-..+.|..+|...| +..+++++++||+.+||+.... .... .....+ +.++ .
T Consensus 140 -~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~-~~~~----------~~~~~~--~~~~------~ 199 (253)
T 1xq6_A 140 -DHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV-RELL----------VGKDDE--LLQT------D 199 (253)
T ss_dssp -TCGGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSS-SCEE----------EESTTG--GGGS------S
T ss_pred -CCccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcch-hhhh----------ccCCcC--CcCC------C
Confidence 11111111234788888877 5679999999999999986431 1100 000111 1222 1
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCceeccCCC---cccHHHHHHHHHHHhCCC
Q 037566 218 CDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGD---VFTWKSLWKLLSEIFDVE 268 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~---~~s~~el~~~ia~~~g~~ 268 (360)
.++++++|+|++++.++.++...|++|||++++ ++|++|+++.+++.+|.+
T Consensus 200 ~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 200 TKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp CCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred CcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 357899999999999887665568999999864 699999999999998863
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-24 Score=193.91 Aligned_cols=198 Identities=10% Similarity=0.040 Sum_probs=152.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCc-eeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC-C
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHV-DHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-K 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v-~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-~ 77 (360)
+||++|+++|++ +|++|++++|++.... +...++ + ++.+|++ +++.+++++ +|+|||+|+... .
T Consensus 32 ~iG~~l~~~L~~------~G~~V~~~~R~~~~~~~~~~~~~~~-~~~~Dl~--~~~~~~~~~----~D~vi~~ag~~~~~ 98 (236)
T 3e8x_A 32 KVARYLLSELKN------KGHEPVAMVRNEEQGPELRERGASD-IVVANLE--EDFSHAFAS----IDAVVFAAGSGPHT 98 (236)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSGGGHHHHHHTTCSE-EEECCTT--SCCGGGGTT----CSEEEECCCCCTTS
T ss_pred hHHHHHHHHHHh------CCCeEEEEECChHHHHHHHhCCCce-EEEcccH--HHHHHHHcC----CCEEEECCCCCCCC
Confidence 489999999999 8999999999865421 112478 8 9999999 667778876 589999998643 4
Q ss_pred ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHH
Q 037566 78 SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVED 157 (360)
Q Consensus 78 ~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek 157 (360)
++...+++|+.|+.+++++|++. +++|||++||...+. .|..+ .+...|+.+|
T Consensus 99 ~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~~~~-------------------~~~~~---~~~~~Y~~sK 151 (236)
T 3e8x_A 99 GADKTILIDLWGAIKTIQEAEKR-----GIKRFIMVSSVGTVD-------------------PDQGP---MNMRHYLVAK 151 (236)
T ss_dssp CHHHHHHTTTHHHHHHHHHHHHH-----TCCEEEEECCTTCSC-------------------GGGSC---GGGHHHHHHH
T ss_pred CccccchhhHHHHHHHHHHHHHc-----CCCEEEEEecCCCCC-------------------CCCCh---hhhhhHHHHH
Confidence 67889999999999999999887 789999999843221 12222 2356699999
Q ss_pred HHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHH
Q 037566 158 IAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAA 234 (360)
Q Consensus 158 ~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~ 234 (360)
...| +..+++++++||+.+||+...... ...++.. ...++++++|+|++++.++
T Consensus 152 ~~~e~~~~~~gi~~~~lrpg~v~~~~~~~~~--------------------~~~~~~~---~~~~~i~~~Dva~~~~~~~ 208 (236)
T 3e8x_A 152 RLADDELKRSSLDYTIVRPGPLSNEESTGKV--------------------TVSPHFS---EITRSITRHDVAKVIAELV 208 (236)
T ss_dssp HHHHHHHHHSSSEEEEEEECSEECSCCCSEE--------------------EEESSCS---CCCCCEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEEeCCcccCCCCCCeE--------------------EeccCCC---cccCcEeHHHHHHHHHHHh
Confidence 8887 567999999999999998543211 1111221 2367889999999999998
Q ss_pred cCCCCCCCceeccCCCcccHHHHHHHHH
Q 037566 235 TTDRAKNQAFNCTNGDVFTWKSLWKLLS 262 (360)
Q Consensus 235 ~~~~~~g~~yni~~g~~~s~~el~~~ia 262 (360)
..+...|++||+++| .++++|+++.|+
T Consensus 209 ~~~~~~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 209 DQQHTIGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp TCGGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred cCccccCCeEEEeCC-CcCHHHHHHHhc
Confidence 876667999999988 599999998765
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=192.81 Aligned_cols=219 Identities=11% Similarity=0.050 Sum_probs=156.4
Q ss_pred CchHHHHHHHhcCCCCCCC-CcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCC
Q 037566 1 MAGLSLAEALKNNPTIPGG-PWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKS 78 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~ 78 (360)
+||++|+++|++ . |++|++++|++.... +...+++ ++.+|++|++++.+++++ +|+|||+|+....
T Consensus 11 ~iG~~l~~~L~~------~~g~~V~~~~R~~~~~~~~~~~~v~-~~~~D~~d~~~l~~~~~~----~d~vi~~a~~~~~- 78 (289)
T 3e48_A 11 HLGTHITNQAIA------NHIDHFHIGVRNVEKVPDDWRGKVS-VRQLDYFNQESMVEAFKG----MDTVVFIPSIIHP- 78 (289)
T ss_dssp HHHHHHHHHHHH------TTCTTEEEEESSGGGSCGGGBTTBE-EEECCTTCHHHHHHHTTT----CSEEEECCCCCCS-
T ss_pred hHHHHHHHHHhh------CCCCcEEEEECCHHHHHHhhhCCCE-EEEcCCCCHHHHHHHHhC----CCEEEEeCCCCcc-
Confidence 489999999998 6 999999999865421 2346899 999999999999999998 5899999985432
Q ss_pred hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHH
Q 037566 79 EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDI 158 (360)
Q Consensus 79 ~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~ 158 (360)
...|+.+++|++++|+++ +++||||+||. |.. ++.|....+...|. ++.
T Consensus 79 ----~~~~~~~~~~l~~aa~~~-----gv~~iv~~Ss~---~~~------------------~~~~~~~~~~~~~~-e~~ 127 (289)
T 3e48_A 79 ----SFKRIPEVENLVYAAKQS-----GVAHIIFIGYY---ADQ------------------HNNPFHMSPYFGYA-SRL 127 (289)
T ss_dssp ----HHHHHHHHHHHHHHHHHT-----TCCEEEEEEES---CCS------------------TTCCSTTHHHHHHH-HHH
T ss_pred ----chhhHHHHHHHHHHHHHc-----CCCEEEEEccc---CCC------------------CCCCCccchhHHHH-HHH
Confidence 235899999999999987 79999999983 321 11111111111122 222
Q ss_pred HHhcCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC
Q 037566 159 AASYSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR 238 (360)
Q Consensus 159 l~e~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~ 238 (360)
+. ..+++++++||+.+||+.. ... ..+.+ .+. .. .+.+. ...++++++|+|++++.++..+.
T Consensus 128 ~~--~~g~~~~ilrp~~~~~~~~----~~~------~~~~~-~~~-~~-~~~g~---~~~~~i~~~Dva~~~~~~l~~~~ 189 (289)
T 3e48_A 128 LS--TSGIDYTYVRMAMYMDPLK----PYL------PELMN-MHK-LI-YPAGD---GRINYITRNDIARGVIAIIKNPD 189 (289)
T ss_dssp HH--HHCCEEEEEEECEESTTHH----HHH------HHHHH-HTE-EC-CCCTT---CEEEEECHHHHHHHHHHHHHCGG
T ss_pred HH--HcCCCEEEEeccccccccH----HHH------HHHHH-CCC-Ee-cCCCC---ceeeeEEHHHHHHHHHHHHcCCC
Confidence 22 3589999999999999621 111 11111 122 12 22232 45789999999999999988765
Q ss_pred CCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHH
Q 037566 239 AKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMK 285 (360)
Q Consensus 239 ~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~ 285 (360)
..|++|||+ ++.+|+.|+++.+++.+|.+... .+++..++..
T Consensus 190 ~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~----~~~~~~~~~~ 231 (289)
T 3e48_A 190 TWGKRYLLS-GYSYDMKELAAILSEASGTEIKY----EPVSLETFAE 231 (289)
T ss_dssp GTTCEEEEC-CEEEEHHHHHHHHHHHHTSCCEE----CCCCHHHHHH
T ss_pred cCCceEEeC-CCcCCHHHHHHHHHHHHCCceeE----EeCCHHHHHH
Confidence 558999999 99999999999999999987542 3455544443
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=171.06 Aligned_cols=188 Identities=12% Similarity=0.047 Sum_probs=140.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCCh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSE 79 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~ 79 (360)
+||++|+++|++ +|++|++++|++.... ....+++ ++.+|++|++++.+++++ +|+|||+|+....
T Consensus 14 ~iG~~l~~~l~~------~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~----~d~vi~~a~~~~~-- 80 (206)
T 1hdo_A 14 QTGLTTLAQAVQ------AGYEVTVLVRDSSRLPSEGPRPAH-VVVGDVLQAADVDKTVAG----QDAVIVLLGTRND-- 80 (206)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESCGGGSCSSSCCCSE-EEESCTTSHHHHHHHHTT----CSEEEECCCCTTC--
T ss_pred HHHHHHHHHHHH------CCCeEEEEEeChhhcccccCCceE-EEEecCCCHHHHHHHHcC----CCEEEECccCCCC--
Confidence 489999999999 8999999999865421 1246789 999999999999999988 5899999985432
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA 159 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l 159 (360)
....++|+.++.+++++|.+. +++|||++||..+|+.. ...| .+...|+.+|..
T Consensus 81 ~~~~~~n~~~~~~~~~~~~~~-----~~~~~v~~Ss~~~~~~~------------~~~~---------~~~~~y~~~K~~ 134 (206)
T 1hdo_A 81 LSPTTVMSEGARNIVAAMKAH-----GVDKVVACTSAFLLWDP------------TKVP---------PRLQAVTDDHIR 134 (206)
T ss_dssp CSCCCHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCT------------TCSC---------GGGHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHh-----CCCeEEEEeeeeeccCc------------cccc---------ccchhHHHHHHH
Confidence 123468999999999999987 78999999999988742 1111 134568888888
Q ss_pred Hh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcC
Q 037566 160 AS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATT 236 (360)
Q Consensus 160 ~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~ 236 (360)
.| +..+++++++||+.+ |+++... .. ...+.+.. . .++++++|+|++++.++.+
T Consensus 135 ~e~~~~~~~i~~~~lrp~~~-~~~~~~~-~~----------------~~~~~~~~----~-~~~i~~~Dva~~~~~~~~~ 191 (206)
T 1hdo_A 135 MHKVLRESGLKYVAVMPPHI-GDQPLTG-AY----------------TVTLDGRG----P-SRVISKHDLGHFMLRCLTT 191 (206)
T ss_dssp HHHHHHHTCSEEEEECCSEE-ECCCCCS-CC----------------EEESSSCS----S-CSEEEHHHHHHHHHHTTSC
T ss_pred HHHHHHhCCCCEEEEeCCcc-cCCCCCc-ce----------------EecccCCC----C-CCccCHHHHHHHHHHHhcC
Confidence 77 557899999999997 5543211 00 00001111 0 3678999999999998887
Q ss_pred CCCCCCceeccCCC
Q 037566 237 DRAKNQAFNCTNGD 250 (360)
Q Consensus 237 ~~~~g~~yni~~g~ 250 (360)
+...|++|||++|.
T Consensus 192 ~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 192 DEYDGHSTYPSHQY 205 (206)
T ss_dssp STTTTCEEEEECCC
T ss_pred ccccccceeeeccc
Confidence 76679999999875
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.5e-23 Score=189.54 Aligned_cols=213 Identities=12% Similarity=-0.069 Sum_probs=156.6
Q ss_pred CchHHHHHHHhcCCCCCCCC-cEEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGGP-WKVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~ 76 (360)
+||++|+++|++ +| ++|++++|++... .+...+++ ++.+|++|++++.+++++ +|+|||+|+...
T Consensus 16 ~iG~~l~~~L~~------~g~~~V~~~~R~~~~~~~~~l~~~~~~-~~~~D~~d~~~l~~~~~~----~d~vi~~a~~~~ 84 (299)
T 2wm3_A 16 AQGGSVARTLLE------DGTFKVRVVTRNPRKKAAKELRLQGAE-VVQGDQDDQVIMELALNG----AYATFIVTNYWE 84 (299)
T ss_dssp HHHHHHHHHHHH------HCSSEEEEEESCTTSHHHHHHHHTTCE-EEECCTTCHHHHHHHHTT----CSEEEECCCHHH
T ss_pred hHHHHHHHHHHh------cCCceEEEEEcCCCCHHHHHHHHCCCE-EEEecCCCHHHHHHHHhc----CCEEEEeCCCCc
Confidence 479999999998 78 9999999986541 01135789 999999999999999998 579999987421
Q ss_pred CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHH
Q 037566 77 KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVE 156 (360)
Q Consensus 77 ~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~e 156 (360)
. ...+.|+.++++++++|++. +++|||++||..+|+.. |..+ ...|..+
T Consensus 85 ~---~~~~~~~~~~~~~~~aa~~~-----gv~~iv~~S~~~~~~~~------------------~~~~-----~~~y~~s 133 (299)
T 2wm3_A 85 S---CSQEQEVKQGKLLADLARRL-----GLHYVVYSGLENIKKLT------------------AGRL-----AAAHFDG 133 (299)
T ss_dssp H---TCHHHHHHHHHHHHHHHHHH-----TCSEEEECCCCCHHHHT------------------TTSC-----CCHHHHH
T ss_pred c---ccchHHHHHHHHHHHHHHHc-----CCCEEEEEcCccccccC------------------CCcc-----cCchhhH
Confidence 1 12457899999999999987 79999998887777531 1111 2337777
Q ss_pred HHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCC--eeeeCCcccccccccccCHHHHHHHHH
Q 037566 157 DIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLP--FRYLGNKYTWEHFCDMSDSRVLAEQQI 231 (360)
Q Consensus 157 k~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~G~~~~~~~~~d~~~v~dla~a~~ 231 (360)
|...| +..+++++++||+.+||+......... ...+.. +.++ .+. ...++++++|+|++++
T Consensus 134 K~~~e~~~~~~gi~~~ilrp~~~~~~~~~~~~~~~----------~~~g~~~~~~~~-~~~---~~~~~i~~~Dva~~~~ 199 (299)
T 2wm3_A 134 KGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQK----------APDGKSYLLSLP-TGD---VPMDGMSVSDLGPVVL 199 (299)
T ss_dssp HHHHHHHHHHHTCCEEEEECCEEGGGGGTTTCCEE----------CTTSSSEEECCC-CTT---SCEEEECGGGHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEeecHHhhhchhhcCCcc----------cCCCCEEEEEec-CCC---CccceecHHHHHHHHH
Confidence 87776 446899999999999997432111100 012322 1222 122 4468899999999999
Q ss_pred HHHcCCC-CCCCceeccCCCcccHHHHHHHHHHHhCCCcc
Q 037566 232 WAATTDR-AKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 232 ~a~~~~~-~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~ 270 (360)
.++.++. ..|++||+++ +.+|+.|+++.+++.+|.+..
T Consensus 200 ~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~ 238 (299)
T 2wm3_A 200 SLLKMPEKYVGQNIGLST-CRHTAEEYAALLTKHTRKVVH 238 (299)
T ss_dssp HHHHSHHHHTTCEEECCS-EEECHHHHHHHHHHHHSSCEE
T ss_pred HHHcChhhhCCeEEEeee-ccCCHHHHHHHHHHHHCCCce
Confidence 8887542 3589999975 689999999999999998765
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-22 Score=179.01 Aligned_cols=188 Identities=12% Similarity=0.045 Sum_probs=144.1
Q ss_pred CchHHHHHHHhcCCCCCCCCc--EEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC--
Q 037566 1 MAGLSLAEALKNNPTIPGGPW--KVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL-- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~--~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~-- 76 (360)
+||++|+++|++ +|+ +|++++|++.. ..++++ ++.+|++|++++.+++ +|+|||+|+...
T Consensus 16 ~iG~~l~~~l~~------~g~~~~V~~~~r~~~~---~~~~~~-~~~~D~~~~~~~~~~~------~d~vi~~a~~~~~~ 79 (215)
T 2a35_A 16 LTGEHLLDRILS------EPTLAKVIAPARKALA---EHPRLD-NPVGPLAELLPQLDGS------IDTAFCCLGTTIKE 79 (215)
T ss_dssp HHHHHHHHHHHH------CTTCCEEECCBSSCCC---CCTTEE-CCBSCHHHHGGGCCSC------CSEEEECCCCCHHH
T ss_pred HHHHHHHHHHHh------CCCCCeEEEEeCCCcc---cCCCce-EEeccccCHHHHHHhh------hcEEEECeeecccc
Confidence 489999999999 888 99999998754 246789 9999999998877665 379999998533
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.+++.++++|+.++.+++++|.+. +++|||++||..+|+. |.+.|+.
T Consensus 80 ~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~---------------------------~~~~y~~ 127 (215)
T 2a35_A 80 AGSEEAFRAVDFDLPLAVGKRALEM-----GARHYLVVSALGADAK---------------------------SSIFYNR 127 (215)
T ss_dssp HSSHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT---------------------------CSSHHHH
T ss_pred CCCHHHHHHhhHHHHHHHHHHHHHc-----CCCEEEEECCcccCCC---------------------------CccHHHH
Confidence 467788999999999999999886 7899999999877641 1345999
Q ss_pred HHHHHh---cCCCCc-EEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHH
Q 037566 156 EDIAAS---YSPAVT-YSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQI 231 (360)
Q Consensus 156 ek~l~e---~~~~~~-~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~ 231 (360)
+|...| +..+++ ++++||+.+|||+.... ... .+ .+...++ +++ ..++++++|+|++++
T Consensus 128 sK~~~e~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~------~~---~~~~~~~-~~~-----~~~~i~~~Dva~~~~ 190 (215)
T 2a35_A 128 VKGELEQALQEQGWPQLTIARPSLLFGPREEFR--LAE------IL---AAPIARI-LPG-----KYHGIEACDLARALW 190 (215)
T ss_dssp HHHHHHHHHTTSCCSEEEEEECCSEESTTSCEE--GGG------GT---TCCCC-----C-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEEEeCceeeCCCCcch--HHH------HH---HHhhhhc-cCC-----CcCcEeHHHHHHHHH
Confidence 999888 556899 99999999999975421 110 00 1111122 221 357899999999999
Q ss_pred HHHcCCCCCCCceeccCCCcccHH
Q 037566 232 WAATTDRAKNQAFNCTNGDVFTWK 255 (360)
Q Consensus 232 ~a~~~~~~~g~~yni~~g~~~s~~ 255 (360)
.++.++. +++||+++++.+++.
T Consensus 191 ~~~~~~~--~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 191 RLALEEG--KGVRFVESDELRKLG 212 (215)
T ss_dssp HHHTCCC--SEEEEEEHHHHHHHH
T ss_pred HHHhcCC--CCceEEcHHHHHHhh
Confidence 9987653 789999998877664
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=8.2e-22 Score=183.40 Aligned_cols=217 Identities=11% Similarity=0.050 Sum_probs=156.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ +|++|++++|++.... +...+++ ++.+|++|++++.+++++ +|+|||+
T Consensus 15 ~iG~~l~~~L~~------~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~l~~~~~~----~d~vi~~ 83 (313)
T 1qyd_A 15 YIGKRIVNASIS------LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDDHQRLVDALKQ----VDVVISA 83 (313)
T ss_dssp TTHHHHHHHHHH------TTCCEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSCHHHHHHHHTT----CSEEEEC
T ss_pred HHHHHHHHHHHh------CCCcEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCCCCHHHHHHHHhC----CCEEEEC
Confidence 589999999999 8999999999864210 1135789 999999999999999998 5899999
Q ss_pred eeecCCChhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCC
Q 037566 72 MFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPN 150 (360)
Q Consensus 72 A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~ 150 (360)
|+.... ..|+.++.|++++|+++ + ++|||+ | +||... ..+ +.+..| ..
T Consensus 84 a~~~~~------~~~~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~~------------~~~---~~~~~p-~~ 132 (313)
T 1qyd_A 84 LAGGVL------SHHILEQLKLVEAIKEA-----GNIKRFLP-S---EFGMDP------------DIM---EHALQP-GS 132 (313)
T ss_dssp CCCSSS------STTTTTHHHHHHHHHHS-----CCCSEEEC-S---CCSSCT------------TSC---CCCCSS-TT
T ss_pred Cccccc------hhhHHHHHHHHHHHHhc-----CCCceEEe-c---CCcCCc------------ccc---ccCCCC-Cc
Confidence 985432 24888999999999986 6 999996 2 466310 111 222222 14
Q ss_pred CcHHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHH
Q 037566 151 FYYAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLA 227 (360)
Q Consensus 151 ~~Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla 227 (360)
.+| .+|...| +..+++++++||+.++|+.......... . .. ..+..+.++|++. ...++++++|+|
T Consensus 133 ~~y-~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~----~-~~--~~~~~~~~~~~g~---~~~~~i~~~Dva 201 (313)
T 1qyd_A 133 ITF-IDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDG----H-MM--PPRDKVLIYGDGN---VKGIWVDEDDVG 201 (313)
T ss_dssp HHH-HHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTC----C-SS--CCSSEECCBTTSC---SEEEEECHHHHH
T ss_pred chH-HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccc----c-cc--CCCCeEEEeCCCC---ceEEEEEHHHHH
Confidence 467 7887777 4568999999999888853222111000 0 00 0122344556654 457899999999
Q ss_pred HHHHHHHcCCCCCCCceeccC-CCcccHHHHHHHHHHHhCCCcc
Q 037566 228 EQQIWAATTDRAKNQAFNCTN-GDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 228 ~a~~~a~~~~~~~g~~yni~~-g~~~s~~el~~~ia~~~g~~~~ 270 (360)
++++.++.++...|++|++++ ++.+|++|+++.+++.+|.+..
T Consensus 202 ~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 245 (313)
T 1qyd_A 202 TYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLD 245 (313)
T ss_dssp HHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred HHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCc
Confidence 999998877655688888775 5789999999999999998765
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=183.46 Aligned_cols=210 Identities=8% Similarity=-0.059 Sum_probs=152.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CC-CCCCceeeEeec-cCChHHHHHHHccCCCCccEEEEeeeec
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WF-PSSHVDHYITFD-ALDSTDTTQKLSSISQEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~-~~~~v~~~v~gD-l~d~~~l~~~l~~~~~~v~~V~h~A~~~ 75 (360)
+||++|+++|++ +|++|++++|++... .+ ...+++ ++.+| ++|++++.+++++ +|+|||+++..
T Consensus 16 ~iG~~l~~~L~~------~g~~V~~~~R~~~~~~~~~l~~~~~v~-~v~~D~l~d~~~l~~~~~~----~d~Vi~~a~~~ 84 (352)
T 1xgk_A 16 RQGASLIRVAAA------VGHHVRAQVHSLKGLIAEELQAIPNVT-LFQGPLLNNVPLMDTLFEG----AHLAFINTTSQ 84 (352)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEESCSCSHHHHHHHTSTTEE-EEESCCTTCHHHHHHHHTT----CSEEEECCCST
T ss_pred HHHHHHHHHHHh------CCCEEEEEECCCChhhHHHHhhcCCcE-EEECCccCCHHHHHHHHhc----CCEEEEcCCCC
Confidence 489999999999 899999999986531 01 124788 99999 9999999999998 47899998643
Q ss_pred CCChhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCc--cccccccCCcccCCcCCCCCCCCCCCCCCCCCCCc
Q 037566 76 LKSEEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTK--HYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFY 152 (360)
Q Consensus 76 ~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~--vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~ 152 (360)
. .+.|+.+ +|++++|++. + ++||||+||.. .|+ + + +...
T Consensus 85 ~------~~~~~~~-~~l~~aa~~~-----g~v~~~V~~SS~~~~~~~--------------------~-----~-~~~~ 126 (352)
T 1xgk_A 85 A------GDEIAIG-KDLADAAKRA-----GTIQHYIYSSMPDHSLYG--------------------P-----W-PAVP 126 (352)
T ss_dssp T------SCHHHHH-HHHHHHHHHH-----SCCSEEEEEECCCGGGTS--------------------S-----C-CCCT
T ss_pred C------cHHHHHH-HHHHHHHHHc-----CCccEEEEeCCccccccC--------------------C-----C-CCcc
Confidence 1 1457777 9999999987 7 89999999874 222 0 0 1123
Q ss_pred HHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCc-chhHHHHHHHHHHHhhcCCC-eeeeCCcccccccccccCH-HHH
Q 037566 153 YAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSL-NNSLLTLAVYATICRHQGLP-FRYLGNKYTWEHFCDMSDS-RVL 226 (360)
Q Consensus 153 Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~~~~~~d~~~v-~dl 226 (360)
|..+|...| +..+++++++||+ +||++.... ..... ......+.. +..++++. ...+++++ +|+
T Consensus 127 y~~sK~~~E~~~~~~gi~~~ivrpg-~~g~~~~~~~~~~~~------~~~~~~g~~~~~~~~~~~---~~~~~i~v~~Dv 196 (352)
T 1xgk_A 127 MWAPKFTVENYVRQLGLPSTFVYAG-IYNNNFTSLPYPLFQ------MELMPDGTFEWHAPFDPD---IPLPWLDAEHDV 196 (352)
T ss_dssp TTHHHHHHHHHHHTSSSCEEEEEEC-EEGGGCBSSSCSSCB------EEECTTSCEEEEESSCTT---SCEEEECHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecc-eecCCchhccccccc------ccccCCCceEEeeccCCC---CceeeEecHHHH
Confidence 667888777 4568999999975 899876321 11100 000012332 23355544 45689999 899
Q ss_pred HHHHHHHHcCCC--CCCCceeccCCCcccHHHHHHHHHHHhCCCcc
Q 037566 227 AEQQIWAATTDR--AKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 227 a~a~~~a~~~~~--~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~ 270 (360)
|++++.++.++. ..|++||+++ +.+|++|+++.+++.+|.+.+
T Consensus 197 a~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~ 241 (352)
T 1xgk_A 197 GPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVT 241 (352)
T ss_dssp HHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred HHHHHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCc
Confidence 999999887542 2589999995 679999999999999998754
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-21 Score=181.09 Aligned_cols=211 Identities=13% Similarity=0.088 Sum_probs=153.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h 70 (360)
+||++|+++|++ +|++|++++|++... .+...+++ ++.+|++|++++.+++++ +|+|||
T Consensus 15 ~iG~~l~~~L~~------~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d~~~l~~~~~~----~d~vi~ 83 (308)
T 1qyc_A 15 YIGRHVAKASLD------LGHPTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDDHASLVEAVKN----VDVVIS 83 (308)
T ss_dssp TTHHHHHHHHHH------TTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTCHHHHHHHHHT----CSEEEE
T ss_pred HHHHHHHHHHHh------CCCCEEEEECCcccccCHHHHHHHHHHHhCCCE-EEEeccCCHHHHHHHHcC----CCEEEE
Confidence 589999999999 899999999986421 01135789 999999999999999998 479999
Q ss_pred eeeecCCChhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 71 VMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 71 ~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
+|+.. ++.++.+++++|+++ + ++|||+ | +||.. .+|..+..| .
T Consensus 84 ~a~~~----------~~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~----------------~~~~~~~~p-~ 127 (308)
T 1qyc_A 84 TVGSL----------QIESQVNIIKAIKEV-----GTVKRFFP-S---EFGND----------------VDNVHAVEP-A 127 (308)
T ss_dssp CCCGG----------GSGGGHHHHHHHHHH-----CCCSEEEC-S---CCSSC----------------TTSCCCCTT-H
T ss_pred CCcch----------hhhhHHHHHHHHHhc-----CCCceEee-c---ccccC----------------ccccccCCc-c
Confidence 98742 255678999999987 6 999985 3 36521 134333322 1
Q ss_pred CCcHHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHH
Q 037566 150 NFYYAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVL 226 (360)
Q Consensus 150 ~~~Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dl 226 (360)
...| .+|...| +..+++++++||+.++|+.......... .. ..+..+.++|++. ...++++++|+
T Consensus 128 ~~~y-~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~---~~~~~i~~~Dv 195 (308)
T 1qyc_A 128 KSVF-EVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGL------TA--PPRDKVVILGDGN---ARVVFVKEEDI 195 (308)
T ss_dssp HHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTC------SS--CCSSEEEEETTSC---CEEEEECHHHH
T ss_pred hhHH-HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccc------cC--CCCCceEEecCCC---ceEEEecHHHH
Confidence 3467 7887766 4468999999999998864322111000 00 0123445667664 45789999999
Q ss_pred HHHHHHHHcCCCCCCCceeccC-CCcccHHHHHHHHHHHhCCCcc
Q 037566 227 AEQQIWAATTDRAKNQAFNCTN-GDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 227 a~a~~~a~~~~~~~g~~yni~~-g~~~s~~el~~~ia~~~g~~~~ 270 (360)
|++++.++.++...|++|++.+ ++.+|++|+++.+++.+|.+..
T Consensus 196 a~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 240 (308)
T 1qyc_A 196 GTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE 240 (308)
T ss_dssp HHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred HHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence 9999988776655688888875 5789999999999999998754
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.4e-21 Score=175.75 Aligned_cols=211 Identities=13% Similarity=0.044 Sum_probs=151.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCC-CC----------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPP-SW----------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~-~~----------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~ 69 (360)
+||++|+++|++ +|++|++++|+++. .. +...+++ ++.+|++|++++.+++++ +|+||
T Consensus 13 ~iG~~l~~~L~~------~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d~~~l~~~~~~----~d~vi 81 (307)
T 2gas_A 13 AIGRHIVWASIK------AGNPTYALVRKTITAANPETKEELIDNYQSLGVI-LLEGDINDHETLVKAIKQ----VDIVI 81 (307)
T ss_dssp TTHHHHHHHHHH------HTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCE-EEECCTTCHHHHHHHHTT----CSEEE
T ss_pred hHHHHHHHHHHh------CCCcEEEEECCCcccCChHHHHHHHHHHHhCCCE-EEEeCCCCHHHHHHHHhC----CCEEE
Confidence 589999999999 89999999998621 00 0125789 999999999999999998 58999
Q ss_pred EeeeecCCChhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 70 WVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 70 h~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
|+|+... +.++.|++++|+++ + ++|||+ | +||.. .+|+.+..|
T Consensus 82 ~~a~~~~----------~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~----------------~~~~~~~~p- 125 (307)
T 2gas_A 82 CAAGRLL----------IEDQVKIIKAIKEA-----GNVKKFFP-S---EFGLD----------------VDRHDAVEP- 125 (307)
T ss_dssp ECSSSSC----------GGGHHHHHHHHHHH-----CCCSEEEC-S---CCSSC----------------TTSCCCCTT-
T ss_pred ECCcccc----------cccHHHHHHHHHhc-----CCceEEee-c---ccccC----------------cccccCCCc-
Confidence 9987532 56789999999987 6 999984 2 46531 133333222
Q ss_pred CCCcHHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHH
Q 037566 149 PNFYYAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRV 225 (360)
Q Consensus 149 p~~~Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~d 225 (360)
....| .+|...| +..+++++++||+.++|+.......... .. ..+..+.++|++. ...++++++|
T Consensus 126 ~~~~y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~---~~~~~i~~~D 193 (307)
T 2gas_A 126 VRQVF-EEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDA------TD--PPRDKVVILGDGN---VKGAYVTEAD 193 (307)
T ss_dssp HHHHH-HHHHHHHHHHHHHTCCBEEEECCEETTTTGGGTTCTTC------SS--CCSSEEEEETTSC---SEEEEECHHH
T ss_pred chhHH-HHHHHHHHHHHHcCCCeEEEEcceeecccccccccccc------cc--CCCCeEEEecCCC---cceEEeeHHH
Confidence 13467 7887766 4568999999999888753211111000 00 0122345566654 4578999999
Q ss_pred HHHHHHHHHcCCCCCCCceeccC-CCcccHHHHHHHHHHHhCCCcc
Q 037566 226 LAEQQIWAATTDRAKNQAFNCTN-GDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 226 la~a~~~a~~~~~~~g~~yni~~-g~~~s~~el~~~ia~~~g~~~~ 270 (360)
+|++++.++.++...|++|++.+ ++.+|++|+++.+++.+|.+..
T Consensus 194 va~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 239 (307)
T 2gas_A 194 VGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLE 239 (307)
T ss_dssp HHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCE
T ss_pred HHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCc
Confidence 99999999877655688787765 5789999999999999998754
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-20 Score=175.44 Aligned_cols=209 Identities=12% Similarity=0.024 Sum_probs=152.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCC-CCCC---------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRP-PPSW---------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~-~~~~---------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h 70 (360)
+||++|+++|++ +|++|++++|++ .... +...+++ ++.+|++|++++.+++++ +|+|||
T Consensus 15 ~iG~~l~~~L~~------~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~-~v~~D~~d~~~l~~a~~~----~d~vi~ 83 (321)
T 3c1o_A 15 YIGKFMVRASLS------FSHPTFIYARPLTPDSTPSSVQLREEFRSMGVT-IIEGEMEEHEKMVSVLKQ----VDIVIS 83 (321)
T ss_dssp TTHHHHHHHHHH------TTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCE-EEECCTTCHHHHHHHHTT----CSEEEE
T ss_pred hhHHHHHHHHHh------CCCcEEEEECCcccccChHHHHHHHHhhcCCcE-EEEecCCCHHHHHHHHcC----CCEEEE
Confidence 589999999999 899999999986 2110 0135789 999999999999999998 479999
Q ss_pred eeeecCCChhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 71 VMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 71 ~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
+|+... +.++++++++|.++ + ++|||+ ++||.. .+|+.+..| .
T Consensus 84 ~a~~~~----------~~~~~~l~~aa~~~-----g~v~~~v~----S~~g~~----------------~~~~~~~~p-~ 127 (321)
T 3c1o_A 84 ALPFPM----------ISSQIHIINAIKAA-----GNIKRFLP----SDFGCE----------------EDRIKPLPP-F 127 (321)
T ss_dssp CCCGGG----------SGGGHHHHHHHHHH-----CCCCEEEC----SCCSSC----------------GGGCCCCHH-H
T ss_pred CCCccc----------hhhHHHHHHHHHHh-----CCccEEec----cccccC----------------ccccccCCC-c
Confidence 987531 56789999999987 6 999983 246531 134333221 1
Q ss_pred CCcHHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHH--HhhcCCCeeeeCCcccccccccccCHH
Q 037566 150 NFYYAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATI--CRHQGLPFRYLGNKYTWEHFCDMSDSR 224 (360)
Q Consensus 150 ~~~Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~G~~~~~~~~~d~~~v~ 224 (360)
.+.| .+|...| +..+++++++||+.++|+.. +. +... ....+..+.+.|++. ...++++++
T Consensus 128 ~~~y-~sK~~~e~~~~~~~~~~~~lrp~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~ 193 (321)
T 3c1o_A 128 ESVL-EKKRIIRRAIEAAALPYTYVSANCFGAYFV----NY------LLHPSPHPNRNDDIVIYGTGE---TKFVLNYEE 193 (321)
T ss_dssp HHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHHHH----HH------HHCCCSSCCTTSCEEEETTSC---CEEEEECHH
T ss_pred chHH-HHHHHHHHHHHHcCCCeEEEEeceeccccc----cc------cccccccccccCceEEecCCC---cceeEeeHH
Confidence 3457 7887776 45689999999988877421 10 0000 000123455566654 457899999
Q ss_pred HHHHHHHHHHcCCCCCCCceeccC-CCcccHHHHHHHHHHHhCCCcc
Q 037566 225 VLAEQQIWAATTDRAKNQAFNCTN-GDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 225 dla~a~~~a~~~~~~~g~~yni~~-g~~~s~~el~~~ia~~~g~~~~ 270 (360)
|+|++++.++.++...|++|++++ ++.+|++|+++.+++.+|.+..
T Consensus 194 Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~ 240 (321)
T 3c1o_A 194 DIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFK 240 (321)
T ss_dssp HHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcce
Confidence 999999999887665688888875 6899999999999999998754
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.8e-21 Score=178.93 Aligned_cols=207 Identities=10% Similarity=-0.014 Sum_probs=151.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~ 75 (360)
+||++|+++|++ +|++|++++|++.... +...+++ ++.+|++|++++.+++++ +|+|||+|+..
T Consensus 22 ~iG~~l~~~L~~------~g~~V~~l~R~~~~~~~~~~~l~~~~v~-~v~~Dl~d~~~l~~a~~~----~d~vi~~a~~~ 90 (318)
T 2r6j_A 22 YIGNHMVKGSLK------LGHPTYVFTRPNSSKTTLLDEFQSLGAI-IVKGELDEHEKLVELMKK----VDVVISALAFP 90 (318)
T ss_dssp TTHHHHHHHHHH------TTCCEEEEECTTCSCHHHHHHHHHTTCE-EEECCTTCHHHHHHHHTT----CSEEEECCCGG
T ss_pred hHHHHHHHHHHH------CCCcEEEEECCCCchhhHHHHhhcCCCE-EEEecCCCHHHHHHHHcC----CCEEEECCchh
Confidence 589999999999 8999999999875210 0135789 999999999999999998 57999998742
Q ss_pred CCChhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHH
Q 037566 76 LKSEEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYA 154 (360)
Q Consensus 76 ~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~ 154 (360)
++.+++|++++|+++ + ++|||+ | +||.. .+|..+..| ....|
T Consensus 91 ----------~~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~----------------~~~~~~~~p-~~~~y- 133 (318)
T 2r6j_A 91 ----------QILDQFKILEAIKVA-----GNIKRFLP-S---DFGVE----------------EDRINALPP-FEALI- 133 (318)
T ss_dssp ----------GSTTHHHHHHHHHHH-----CCCCEEEC-S---CCSSC----------------TTTCCCCHH-HHHHH-
T ss_pred ----------hhHHHHHHHHHHHhc-----CCCCEEEe-e---ccccC----------------cccccCCCC-cchhH-
Confidence 256789999999987 6 999985 2 36531 133333221 13457
Q ss_pred HHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHh-hcCCCeeeeCCcccccccccccCHHHHHHHH
Q 037566 155 VEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICR-HQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQ 230 (360)
Q Consensus 155 ~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~ 230 (360)
.+|...| +..+++++++||+.++|.. .+. + +.. ..+..+.++|++. ...++++++|+|+++
T Consensus 134 ~sK~~~e~~~~~~~~~~~~lr~~~~~~~~----~~~------~--~~~~~~~~~~~~~~~~~---~~~~~i~~~Dva~~~ 198 (318)
T 2r6j_A 134 ERKRMIRRAIEEANIPYTYVSANCFASYF----INY------L--LRPYDPKDEITVYGTGE---AKFAMNYEQDIGLYT 198 (318)
T ss_dssp HHHHHHHHHHHHTTCCBEEEECCEEHHHH----HHH------H--HCTTCCCSEEEEETTSC---CEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEcceehhhh----hhh------h--ccccCCCCceEEecCCC---ceeeEeeHHHHHHHH
Confidence 7787666 4568999999998766531 110 0 100 0233455566654 557899999999999
Q ss_pred HHHHcCCCCCCCceeccC-CCcccHHHHHHHHHHHhCCCcc
Q 037566 231 IWAATTDRAKNQAFNCTN-GDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 231 ~~a~~~~~~~g~~yni~~-g~~~s~~el~~~ia~~~g~~~~ 270 (360)
+.++.++...|++|++.+ ++.+|++|+++.+++.+|.+..
T Consensus 199 ~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 239 (318)
T 2r6j_A 199 IKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFK 239 (318)
T ss_dssp HHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred HHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCc
Confidence 988876655578887764 6899999999999999998754
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=162.84 Aligned_cols=190 Identities=14% Similarity=0.044 Sum_probs=136.8
Q ss_pred CchHHHHHHHhcCCCCCCCCc--EEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC-
Q 037566 1 MAGLSLAEALKNNPTIPGGPW--KVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~--~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~- 76 (360)
+||++|+++|++ +|+ +|++++|++.... ....+++ ++.+|++|++++.+++++ +|+|||+|+...
T Consensus 29 ~iG~~l~~~L~~------~G~~~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~----~d~vi~~ag~~~~ 97 (242)
T 2bka_A 29 ETGRVLLKEILE------QGLFSKVTLIGRRKLTFDEEAYKNVN-QEVVDFEKLDDYASAFQG----HDVGFCCLGTTRG 97 (242)
T ss_dssp HHHHHHHHHHHH------HTCCSEEEEEESSCCCCCSGGGGGCE-EEECCGGGGGGGGGGGSS----CSEEEECCCCCHH
T ss_pred HHHHHHHHHHHc------CCCCCEEEEEEcCCCCccccccCCce-EEecCcCCHHHHHHHhcC----CCEEEECCCcccc
Confidence 489999999999 899 9999999865421 1124688 999999999999999886 589999998532
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.+++.++++|+.++.++++++.+. ++++||++||..+|+. +.+.|+.
T Consensus 98 ~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~iv~~SS~~~~~~---------------------------~~~~Y~~ 145 (242)
T 2bka_A 98 KAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS---------------------------SNFLYLQ 145 (242)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT---------------------------CSSHHHH
T ss_pred cCCcccceeeeHHHHHHHHHHHHHC-----CCCEEEEEccCcCCCC---------------------------CcchHHH
Confidence 245678899999999999999886 6889999999877641 1234899
Q ss_pred HHHHHh---cCCCC-cEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHH
Q 037566 156 EDIAAS---YSPAV-TYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQI 231 (360)
Q Consensus 156 ek~l~e---~~~~~-~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~ 231 (360)
+|...| +..++ +++++||+.||||+.... ... .+...+. ...+.. .+. ..+++++|+|++++
T Consensus 146 sK~~~e~~~~~~~~~~~~~vrpg~v~~~~~~~~--~~~--~~~~~~~--~~~~~~-~~~-------~~~~~~~dva~~~~ 211 (242)
T 2bka_A 146 VKGEVEAKVEELKFDRYSVFRPGVLLCDRQESR--PGE--WLVRKFF--GSLPDS-WAS-------GHSVPVVTVVRAML 211 (242)
T ss_dssp HHHHHHHHHHTTCCSEEEEEECCEEECTTGGGS--HHH--HHHHHHH--CSCCTT-GGG-------GTEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeEEEcCceecCCCCCCc--HHH--HHHHHhh--cccCcc-ccC-------CcccCHHHHHHHHH
Confidence 998777 55678 599999999999864221 111 0111111 122211 111 24789999999999
Q ss_pred HHHcCCCCCCCceeccC
Q 037566 232 WAATTDRAKNQAFNCTN 248 (360)
Q Consensus 232 ~a~~~~~~~g~~yni~~ 248 (360)
.++.++. .++.|++.+
T Consensus 212 ~~~~~~~-~~~~~~~~~ 227 (242)
T 2bka_A 212 NNVVRPR-DKQMELLEN 227 (242)
T ss_dssp HHHTSCC-CSSEEEEEH
T ss_pred HHHhCcc-ccCeeEeeH
Confidence 9887543 345665543
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-17 Score=148.85 Aligned_cols=190 Identities=9% Similarity=0.070 Sum_probs=127.0
Q ss_pred CchHHHHHHHhcCCCCCCCC-cEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCC
Q 037566 1 MAGLSLAEALKNNPTIPGGP-WKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKS 78 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~ 78 (360)
+||++|+++|++ +| ++|++++|++... .....+++ ++.+|++|++++.+++++ +|+|||+|+.. +
T Consensus 34 ~iG~~l~~~L~~------~G~~~V~~~~R~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~D~vv~~a~~~--~ 100 (236)
T 3qvo_A 34 QIARHVINQLAD------KQTIKQTLFARQPAKIHKPYPTNSQ-IIMGDVLNHAALKQAMQG----QDIVYANLTGE--D 100 (236)
T ss_dssp HHHHHHHHHHTT------CTTEEEEEEESSGGGSCSSCCTTEE-EEECCTTCHHHHHHHHTT----CSEEEEECCST--T
T ss_pred HHHHHHHHHHHh------CCCceEEEEEcChhhhcccccCCcE-EEEecCCCHHHHHHHhcC----CCEEEEcCCCC--c
Confidence 389999999999 89 9999999986542 12346889 999999999999999998 47999998642 1
Q ss_pred hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHH
Q 037566 79 EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDI 158 (360)
Q Consensus 79 ~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~ 158 (360)
...+++++++++++. +++|||++||..+|+... + ...+..|..+. .+...|...+.
T Consensus 101 -------~~~~~~~~~~~~~~~-----~~~~iV~iSS~~~~~~~~------~----~~~~~~~~~~~--~~~~~~~~~~~ 156 (236)
T 3qvo_A 101 -------LDIQANSVIAAMKAC-----DVKRLIFVLSLGIYDEVP------G----KFVEWNNAVIG--EPLKPFRRAAD 156 (236)
T ss_dssp -------HHHHHHHHHHHHHHT-----TCCEEEEECCCCC--------------------------C--GGGHHHHHHHH
T ss_pred -------hhHHHHHHHHHHHHc-----CCCEEEEEecceecCCCC------c----ccccchhhccc--chHHHHHHHHH
Confidence 123578999999886 789999999999997531 0 12233444332 22333544322
Q ss_pred HHhcCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC
Q 037566 159 AASYSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR 238 (360)
Q Consensus 159 l~e~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~ 238 (360)
.. +..+++++++||+.++++..... ... ..+.+ .. ..+++.+|+|++++.++..+.
T Consensus 157 ~l-~~~gi~~~~vrPg~i~~~~~~~~-~~~-----------~~~~~--~~---------~~~i~~~DvA~~i~~ll~~~~ 212 (236)
T 3qvo_A 157 AI-EASGLEYTILRPAWLTDEDIIDY-ELT-----------SRNEP--FK---------GTIVSRKSVAALITDIIDKPE 212 (236)
T ss_dssp HH-HTSCSEEEEEEECEEECCSCCCC-EEE-----------CTTSC--CS---------CSEEEHHHHHHHHHHHHHSTT
T ss_pred HH-HHCCCCEEEEeCCcccCCCCcce-EEe-----------ccCCC--CC---------CcEECHHHHHHHHHHHHcCcc
Confidence 22 35689999999999999743221 100 01111 11 235789999999999988765
Q ss_pred -CCCCceeccCCCc
Q 037566 239 -AKNQAFNCTNGDV 251 (360)
Q Consensus 239 -~~g~~yni~~g~~ 251 (360)
..|++|+|+++..
T Consensus 213 ~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 213 KHIGENIGINQPGT 226 (236)
T ss_dssp TTTTEEEEEECSSC
T ss_pred cccCeeEEecCCCC
Confidence 4599999998764
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.9e-19 Score=161.02 Aligned_cols=214 Identities=12% Similarity=0.062 Sum_probs=145.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC-CCCccEEEEeeeecC--C
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI-SQEVTHLFWVMFQRL--K 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~-~~~v~~V~h~A~~~~--~ 77 (360)
+||++|+++|++ +|++|++++|++... -. .+.+|++|++++.++++.+ + ++|+|||+|+... .
T Consensus 12 ~iG~~l~~~L~~------~g~~V~~~~r~~~~~------~~-~~~~D~~~~~~~~~~~~~~~~-~~d~vi~~Ag~~~~~~ 77 (255)
T 2dkn_A 12 GIGAALKELLAR------AGHTVIGIDRGQADI------EA-DLSTPGGRETAVAAVLDRCGG-VLDGLVCCAGVGVTAA 77 (255)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSSSSE------EC-CTTSHHHHHHHHHHHHHHHTT-CCSEEEECCCCCTTSS
T ss_pred HHHHHHHHHHHh------CCCEEEEEeCChhHc------cc-cccCCcccHHHHHHHHHHcCC-CccEEEECCCCCCcch
Confidence 489999999999 899999999976431 12 3678999999999888743 1 2799999998643 4
Q ss_pred ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC-------CCCCCCC----
Q 037566 78 SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF-------KEDSLRL---- 146 (360)
Q Consensus 78 ~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~-------~E~~p~~---- 146 (360)
+.+..+++|+.|+.++++++.+.++. .+.+|||++||..+|+... ...+. +|+.+..
T Consensus 78 ~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~~~iv~~sS~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 145 (255)
T 2dkn_A 78 NSGLVVAVNYFGVSALLDGLAEALSR-GQQPAAVIVGSIAATQPGA-----------AELPMVEAMLAGDEARAIELAEQ 145 (255)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHHHHT-SSSCEEEEECCGGGGSTTG-----------GGCHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHhHHHHHHHHHHHHHhhh-cCCceEEEEeccccccccc-----------cccchhhhhcccchhhhhhhccc
Confidence 67789999999999999998764321 2468999999999886421 01111 1111100
Q ss_pred -CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 147 -PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 147 -p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
+.+...|+.+|...+ ...+++++++||+.|+||......... ......+ . +.+
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~----~~~~~~~--~----~~~------ 209 (255)
T 2dkn_A 146 QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADP----RYGESTR--R----FVA------ 209 (255)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCT----TTHHHHH--S----CCC------
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccch----hhHHHHH--H----HHH------
Confidence 013456998887665 126899999999999997421100000 0000000 0 001
Q ss_pred ccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccHHH
Q 037566 216 HFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWKS 256 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~~e 256 (360)
...++++++|+|+++++++..+ ...|++||+++|..++++|
T Consensus 210 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 210 PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 1236789999999999988654 3458999999998877654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.7e-18 Score=155.42 Aligned_cols=217 Identities=8% Similarity=-0.046 Sum_probs=150.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||++++++|++ +|++|++++|+.... .....+++ ++.+|++|++++.++++.+ . ++|+|||+
T Consensus 28 iG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~~ 99 (278)
T 2bgk_A 28 IGETTAKLFVR------YGAKVVIADIADDHGQKVCNNIGSPDVIS-FVHCDVTKDEDVRNLVDTTIAKHG-KLDIMFGN 99 (278)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCCTTTEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEEC
T ss_pred HHHHHHHHHHH------CCCEEEEEcCChhHHHHHHHHhCCCCceE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEEEC
Confidence 79999999999 899999999874221 00112688 9999999999998887632 1 17999999
Q ss_pred eeecCC-----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 72 MFQRLK-----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 72 A~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+.... +....+++|+.|+.++++++...++. .+..+||++||..+|+..
T Consensus 100 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~------------------ 160 (278)
T 2bgk_A 100 VGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIP-AKKGSIVFTASISSFTAG------------------ 160 (278)
T ss_dssp CCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGG-GTCEEEEEECCGGGTCCC------------------
T ss_pred CcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh-cCCCeEEEEeeccccCCC------------------
Confidence 985321 23457899999999999998775321 146799999998776421
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+.+...|+.+|...+ ...+++++++||+.|+|+........... ....+.+. .+.
T Consensus 161 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~--~~~----- 225 (278)
T 2bgk_A 161 ------EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS--RVEELAHQ--AAN----- 225 (278)
T ss_dssp ------TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHH--HHHHHHHH--TCS-----
T ss_pred ------CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchh--HHHHhhhc--ccc-----
Confidence 012345888876554 24689999999999999864332110000 01111111 111
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccHHHHHHHHHHHh
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWKSLWKLLSEIF 265 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~~el~~~ia~~~ 265 (360)
....+++++|+|+++++++..+ ...|+.|++.+|..++++|+++.+++.+
T Consensus 226 -----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 226 -----LKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp -----SCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred -----cccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 1124678999999999888543 2358999999999999999998886654
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.8e-17 Score=148.69 Aligned_cols=213 Identities=11% Similarity=-0.071 Sum_probs=142.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
.||++++++|++ +|++|++++|+..... ....+++ ++.+|++|++++.++++.+ . ++|+|||+|
T Consensus 16 gIG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g-~id~lv~~A 87 (281)
T 3m1a_A 16 GFGRAIAEAAVA------AGDTVIGTARRTEALDDLVAAYPDRAE-AISLDVTDGERIDVVAADVLARYG-RVDVLVNNA 87 (281)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSGGGGHHHHHHCTTTEE-EEECCTTCHHHHHHHHHHHHHHHS-CCSEEEECC
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHhccCCce-EEEeeCCCHHHHHHHHHHHHHhCC-CCCEEEECC
Confidence 389999999999 9999999999764320 0135788 9999999999988887643 1 179999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHH----HHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSV----VVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a----~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+.... +.+..+++|+.|+.++.++ +++. +..+||++||...+..
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~------------------ 144 (281)
T 3m1a_A 88 GRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-----GSGSVVNISSFGGQLS------------------ 144 (281)
T ss_dssp CCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCC------------------
T ss_pred CcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEEcCccccCC------------------
Confidence 85311 2345789999995555544 4444 5689999998754421
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCc--------chhHHHHHHHHHHHhhc
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSL--------NNSLLTLAVYATICRHQ 201 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~--------~~~~~~~~~~~~~~~~~ 201 (360)
..+.+.|+.+|...+ ...|++++++||+.|++|..+.. ........ ...
T Consensus 145 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~--- 211 (281)
T 3m1a_A 145 -------FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVG---PTR--- 211 (281)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHH---HHH---
T ss_pred -------CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhH---HHH---
Confidence 012456888887555 23689999999999988743210 01111000 000
Q ss_pred CCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhC
Q 037566 202 GLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFD 266 (360)
Q Consensus 202 ~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g 266 (360)
++...+ ....+.+++|+|+++++++..+ ..++.||++++....+.+....+.+.++
T Consensus 212 --~~~~~~------~~~~~~~~~dva~a~~~~~~~~-~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 212 --QLVQGS------DGSQPGDPAKAAAAIRLALDTE-KTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp --HHHHC-----------CBCHHHHHHHHHHHHHSS-SCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHhhc------cCCCCCCHHHHHHHHHHHHhCC-CCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 000001 1234677999999999998765 4578999998887777777777666553
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.69 E-value=8e-16 Score=139.73 Aligned_cols=196 Identities=12% Similarity=0.108 Sum_probs=137.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~~ 77 (360)
||++++++|++ +|++|++++|+.... ...++. ++.+|++|++++.++++.+ . ++|+|+|+|+....
T Consensus 40 IG~aia~~l~~------~G~~V~~~~r~~~~~--~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv~nAg~~~~ 109 (260)
T 3un1_A 40 IGAGLVRAYRD------RNYRVVATSRSIKPS--ADPDIH-TVAGDISKPETADRIVREGIERFG-RIDSLVNNAGVFLA 109 (260)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCCCC--SSTTEE-EEESCTTSHHHHHHHHHHHHHHHS-CCCEEEECCCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChhhc--ccCceE-EEEccCCCHHHHHHHHHHHHHHCC-CCCEEEECCCCCCC
Confidence 89999999999 999999999986542 235788 9999999999988877632 1 17999999985321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.|+.++++++...++.. +..+||++||..++... + ..
T Consensus 110 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~---------------------~--~~ 165 (260)
T 3un1_A 110 KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITTSLVDQPM---------------------V--GM 165 (260)
T ss_dssp CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCTTTTSCB---------------------T--TC
T ss_pred CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEechhhccCC---------------------C--CC
Confidence 234578999999999999985432211 56799999987655311 0 01
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
+...|+.+|...+ ...|+.+.+++|+.|++|...... . ..+. ...|+ .
T Consensus 166 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--~------~~~~--~~~p~------------~ 223 (260)
T 3un1_A 166 PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET--H------STLA--GLHPV------------G 223 (260)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG--H------HHHH--TTSTT------------S
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH--H------HHHh--ccCCC------------C
Confidence 2456887775443 345899999999999997542211 0 0111 11221 2
Q ss_pred cccCHHHHHHHHHHHHcCCCCCCCceeccCCCccc
Q 037566 219 DMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFT 253 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s 253 (360)
.+.+++|+|++++++...+...|++|+|.+|...+
T Consensus 224 r~~~~~dva~av~~L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 224 RMGEIRDVVDAVLYLEHAGFITGEILHVDGGQNAG 258 (260)
T ss_dssp SCBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGGC
T ss_pred CCcCHHHHHHHHHHhcccCCCCCcEEEECCCeecc
Confidence 35678999999998865555679999998886543
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=143.91 Aligned_cols=201 Identities=11% Similarity=0.017 Sum_probs=138.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|++... . ....++. ++.+|++|++++.++++.+ . ++|+|||
T Consensus 23 iG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~ 94 (255)
T 1fmc_A 23 IGKEIAITFAT------AGASVVVSDINADAANHVVDEIQQLGGQAF-ACRCDITSEQELSALADFAISKLG-KVDILVN 94 (255)
T ss_dssp HHHHHHHHHHT------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-SCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHHHHhcC-CCCEEEE
Confidence 79999999999 899999999975321 0 0134678 8999999999988887632 1 1799999
Q ss_pred eeeecCC--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 71 VMFQRLK--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 71 ~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
+|+.... +.+..+++|+.|+.++++++...++ ..+.++||++||..+|...
T Consensus 95 ~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~-------------------- 153 (255)
T 1fmc_A 95 NAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEME-KNGGGVILTITSMAAENKN-------------------- 153 (255)
T ss_dssp CCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTCCC--------------------
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcchhhcCCC--------------------
Confidence 9985321 2346789999999999999864221 1156899999998665310
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
.+...|+.+|...+ ...++.+.++||+.|+++......... ....+. .+.|+
T Consensus 154 -----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~--~~~~~------- 215 (255)
T 1fmc_A 154 -----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE----IEQKML--QHTPI------- 215 (255)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH----HHHHHH--HTCSS-------
T ss_pred -----CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChH----HHHHHH--hcCCc-------
Confidence 12445888876554 346899999999999997432211110 011111 12221
Q ss_pred cccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcccH
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFTW 254 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s~ 254 (360)
..+.+++|+|+++++++..+. ..|++|||++|..+|+
T Consensus 216 -----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 216 -----RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp -----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred -----ccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence 235678999999998875432 3589999999988765
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=9.4e-17 Score=143.91 Aligned_cols=201 Identities=11% Similarity=0.060 Sum_probs=138.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
.||++++++|++ +|++|++++|++.... ....+++ ++.+|++|++++.+++++... +|+|||+|+....
T Consensus 18 giG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id~vi~~Ag~~~~ 89 (244)
T 1cyd_A 18 GIGRDTVKALHA------SGAKVVAVTRTNSDLVSLAKECPGIE-PVCVDLGDWDATEKALGGIGP-VDLLVNNAALVIM 89 (244)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHTTCCC-CSEEEECCCCCCC
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHhccCCC-cEEecCCCHHHHHHHHHHcCC-CCEEEECCcccCC
Confidence 389999999999 8999999999753210 0113678 889999999999999986543 8999999984321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
+.+..+++|+.|+.++++++.+.++.. + ..+||++||..+|+.. +
T Consensus 90 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~~iv~~sS~~~~~~~------------------------~ 144 (244)
T 1cyd_A 90 QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR-GVPGSIVNVSSMVAHVTF------------------------P 144 (244)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEEECCGGGTSCC------------------------T
T ss_pred CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC-CCCeEEEEEcchhhcCCC------------------------C
Confidence 234578999999999999987642211 3 5799999998766420 0
Q ss_pred CCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 148 FPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
+...|+.+|...+ ...++.+.++||+.|+|+.......... ....+.+ +.+ .
T Consensus 145 -~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~--~~~------------~ 206 (244)
T 1cyd_A 145 -NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPE---FARKLKE--RHP------------L 206 (244)
T ss_dssp -TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHH---HHHHHHH--HST------------T
T ss_pred -CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHH---HHHHHHh--cCC------------c
Confidence 2345888876554 2358999999999999974321100000 0011111 111 2
Q ss_pred ccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc
Q 037566 218 CDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 252 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~ 252 (360)
.++++++|+|+++++++..+. ..|+.|++.+|...
T Consensus 207 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 243 (244)
T 1cyd_A 207 RKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYLA 243 (244)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGGG
T ss_pred cCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCccC
Confidence 467899999999999886432 34899999877543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.4e-16 Score=137.57 Aligned_cols=186 Identities=8% Similarity=0.030 Sum_probs=130.5
Q ss_pred CchHHHHHHHh-cCCCCCCCCcEEEEEecCCC-CCC-C--CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec
Q 037566 1 MAGLSLAEALK-NNPTIPGGPWKVYGTARRPP-PSW-F--PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll-~~~~~~~~g~~V~~l~r~~~-~~~-~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~ 75 (360)
.||++|+++|+ + +|++|++++|++. ... + ...+++ ++.+|++|++++.+++++ +|+|||+|+..
T Consensus 16 ~iG~~~~~~l~~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~----~d~vv~~ag~~ 84 (221)
T 3r6d_A 16 QIAQXLTATLLTY------TDMHITLYGRQLKTRIPPEIIDHERVT-VIEGSFQNPGXLEQAVTN----AEVVFVGAMES 84 (221)
T ss_dssp HHHHHHHHHHHHH------CCCEEEEEESSHHHHSCHHHHTSTTEE-EEECCTTCHHHHHHHHTT----CSEEEESCCCC
T ss_pred HHHHHHHHHHHhc------CCceEEEEecCccccchhhccCCCceE-EEECCCCCHHHHHHHHcC----CCEEEEcCCCC
Confidence 37999999999 8 8999999999865 321 1 246789 999999999999999987 58999999742
Q ss_pred CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 76 LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 76 ~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
|+. ++++++++++. +++|||++||..+|+.. ..+..+... +.....|..
T Consensus 85 ----------n~~-~~~~~~~~~~~-----~~~~iv~iSs~~~~~~~-------------~~~~~~~~~--~~~~~~y~~ 133 (221)
T 3r6d_A 85 ----------GSD-MASIVKALSRX-----NIRRVIGVSMAGLSGEF-------------PVALEKWTF--DNLPISYVQ 133 (221)
T ss_dssp ----------HHH-HHHHHHHHHHT-----TCCEEEEEEETTTTSCS-------------CHHHHHHHH--HTSCHHHHH
T ss_pred ----------Chh-HHHHHHHHHhc-----CCCeEEEEeeceecCCC-------------Ccccccccc--cccccHHHH
Confidence 556 99999999886 78999999999888632 001111000 001115888
Q ss_pred HHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIW 232 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~ 232 (360)
+|...| +..+++++++||+.++++.....+... ..+.+ +. ..+++.+|+|++++.
T Consensus 134 ~K~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~~~~-----------~~~~~--~~---------~~~~~~~dvA~~~~~ 191 (221)
T 3r6d_A 134 GERQARNVLRESNLNYTILRLTWLYNDPEXTDYELI-----------PEGAQ--FN---------DAQVSREAVVKAIFD 191 (221)
T ss_dssp HHHHHHHHHHHSCSEEEEEEECEEECCTTCCCCEEE-----------CTTSC--CC---------CCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEechhhcCCCCCcceeec-----------cCCcc--CC---------CceeeHHHHHHHHHH
Confidence 887766 557999999999999997221111100 00111 11 125678999999999
Q ss_pred HH--cCCCC-CCCceeccCCC
Q 037566 233 AA--TTDRA-KNQAFNCTNGD 250 (360)
Q Consensus 233 a~--~~~~~-~g~~yni~~g~ 250 (360)
++ .++.. .++.+.++++.
T Consensus 192 l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 192 ILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp HHTCSCCGGGTTEEEEEECTT
T ss_pred HHHhcChhhhhcceeeecCCC
Confidence 98 66542 47788887554
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=3e-16 Score=140.25 Aligned_cols=196 Identities=12% Similarity=0.050 Sum_probs=137.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC---CCCccEEEEeeeecCC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI---SQEVTHLFWVMFQRLK- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~---~~~v~~V~h~A~~~~~- 77 (360)
||++|+++|++ +|++|++++|++. ...+. ++.+|++|++++.++++.+ . ++|+|+|+|+....
T Consensus 14 iG~~la~~l~~------~G~~V~~~~r~~~-----~~~~~-~~~~D~~~~~~~~~~~~~~~~~~-~~d~li~~ag~~~~~ 80 (242)
T 1uay_A 14 LGRAAALALKA------RGYRVVVLDLRRE-----GEDLI-YVEGDVTREEDVRRAVARAQEEA-PLFAVVSAAGVGLAE 80 (242)
T ss_dssp HHHHHHHHHHH------HTCEEEEEESSCC-----SSSSE-EEECCTTCHHHHHHHHHHHHHHS-CEEEEEECCCCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEccCcc-----ccceE-EEeCCCCCHHHHHHHHHHHHhhC-CceEEEEcccccCcc
Confidence 79999999999 8999999999865 13567 9999999999998888743 1 17999999985321
Q ss_pred ------------ChhHhhhhhHHHHHHHHHHHHhhccCCC-----CccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 78 ------------SEEINISNNSTMFKNVMSVVVDSNKGRS-----RLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 78 ------------~~~~~~~vNv~gt~nll~a~~~~~~~~~-----~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+.+..+++|+.|+.++++++.+.++... ...+||++||...|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------------ 142 (242)
T 1uay_A 81 KILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ------------------ 142 (242)
T ss_dssp CSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC------------------
T ss_pred cccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC------------------
Confidence 3356789999999999999987543111 12499999998766421
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+...|+.+|...+ ...+++++++||+.|+++........ ....+. ...|+ +
T Consensus 143 -------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~~~--~-- 204 (242)
T 1uay_A 143 -------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK-----AKASLA--AQVPF--P-- 204 (242)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH-----HHHHHH--TTCCS--S--
T ss_pred -------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchh-----HHHHHH--hhCCC--c--
Confidence 02345888775443 34589999999999999753221111 011111 12221 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCccc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFT 253 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s 253 (360)
..+.+++|+|+++++++..+...|+.|+|.+|..++
T Consensus 205 -------~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 205 -------PRLGRPEEYAALVLHILENPMLNGEVVRLDGALRMA 240 (242)
T ss_dssp -------CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred -------ccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence 135679999999998887655569999998887553
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=7.3e-17 Score=149.41 Aligned_cols=216 Identities=9% Similarity=-0.035 Sum_probs=145.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C--C-CCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F--P-SSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~--~-~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++++++|++ +|++|++++|++.... . . ..++. ++.+|++|++++.++++.+ . .+|+|
T Consensus 37 giG~~la~~L~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~id~l 108 (302)
T 1w6u_A 37 GLGKGMTTLLSS------LGAQCVIASRKMDVLKATAEQISSQTGNKVH-AIQCDVRDPDMVQNTVSELIKVAG-HPNIV 108 (302)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHHSSCEE-EEECCTTCHHHHHHHHHHHHHHTC-SCSEE
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHhcCCceE-EEEeCCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 389999999999 8999999999753210 0 0 34688 9999999999988887654 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||+|+.... +.+..+++|+.|+.++++++...++...+..+||++||...+.. .
T Consensus 109 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~--------------~--- 171 (302)
T 1w6u_A 109 INNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG--------------S--- 171 (302)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC--------------C---
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC--------------C---
Confidence 999985321 23567899999999999998754210124579999998765431 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCC-CcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
.+...|+.+|...+ ...|++++++||+.|++++.. ....... .. ..+. .+.|+
T Consensus 172 --------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~-~~~~--~~~p~--- 235 (302)
T 1w6u_A 172 --------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT--FE-KEMI--GRIPC--- 235 (302)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH--HH-HHHH--TTCTT---
T ss_pred --------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchh--hH-HHHH--hcCCc---
Confidence 12445888876655 236899999999999997432 1111100 00 0111 12221
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcccHHHHHHHHHHHhC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFTWKSLWKLLSEIFD 266 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s~~el~~~ia~~~g 266 (360)
..+.+++|+|+++++++..+. ..|++||+.+|..++++|+++.+.+.+|
T Consensus 236 ---------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 236 ---------GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK 286 (302)
T ss_dssp ---------SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred ---------CCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence 235679999999998875432 2589999999998988888777766554
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.9e-16 Score=145.01 Aligned_cols=215 Identities=12% Similarity=0.105 Sum_probs=133.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
||++++++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+ . ++|+
T Consensus 18 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~ 89 (278)
T 1spx_A 18 IGRATAVLFAR------EGAKVTITGRHAERLEETRQQILAAGVSEQNVN-SVVADVTTDAGQDEILSTTLGKFG-KLDI 89 (278)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcccCCCcee-EEecccCCHHHHHHHHHHHHHHcC-CCCE
Confidence 79999999999 899999999974321 00123578 8999999999988887632 1 1799
Q ss_pred EEEeeeecCC-------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc-ccccccCCcccCCcC
Q 037566 68 LFWVMFQRLK-------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH-YMGPVFDPSLVGQLI 133 (360)
Q Consensus 68 V~h~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~ 133 (360)
|||+|+.... +.+..+++|+.|+.++++++...++.. + .+||++||... |...
T Consensus 90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~-g~iv~isS~~~~~~~~----------- 156 (278)
T 1spx_A 90 LVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-K-GEIVNISSIASGLHAT----------- 156 (278)
T ss_dssp EEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCTTSSSSCC-----------
T ss_pred EEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C-CeEEEEecccccccCC-----------
Confidence 9999985321 234578999999999999987653211 3 79999998765 3210
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcc-hhHHH--H-HHHHHHHh
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLN-NSLLT--L-AVYATICR 199 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~-~~~~~--~-~~~~~~~~ 199 (360)
+ +...|+.+|...+ ...|++++++||+.|+++...... ..... . .....+.+
T Consensus 157 -------------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (278)
T 1spx_A 157 -------------P-DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE 222 (278)
T ss_dssp -------------T-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH
T ss_pred -------------C-CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHh
Confidence 1 1345888776544 346899999999999987432110 00000 0 00011111
Q ss_pred hcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC---CCCCceeccCCCcccHHHHHHHHHHHh
Q 037566 200 HQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR---AKNQAFNCTNGDVFTWKSLWKLLSEIF 265 (360)
Q Consensus 200 ~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~---~~g~~yni~~g~~~s~~el~~~ia~~~ 265 (360)
..| ...+.+.+|+|+++++++..+. ..|++|++.+|..+++.|+.+.+++.+
T Consensus 223 --~~p------------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 223 --CVP------------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp --HCT------------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred --cCC------------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 111 1235789999999998875432 459999999999999999999888764
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.64 E-value=3e-16 Score=144.00 Aligned_cols=218 Identities=11% Similarity=0.060 Sum_probs=149.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
||++++++|++ +|++|++++|++... .. ...++. ++.+|++|++++.++++.+ . ++|+
T Consensus 23 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~ 94 (281)
T 3svt_A 23 IGKGVAAGLVA------AGASVMIVGRNPDKLAGAVQELEALGANGGAIR-YEPTDITNEDETARAVDAVTAWHG-RLHG 94 (281)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEE-EEeCCCCCHHHHHHHHHHHHHHcC-CCCE
Confidence 89999999999 999999999875321 00 112678 9999999999988887653 1 2799
Q ss_pred EEEeeee-cCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 68 LFWVMFQ-RLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 68 V~h~A~~-~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+|+|+. ... +.+..+++|+.|+.++++++...++.. +-.+||++||...|...
T Consensus 95 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~--------------- 158 (281)
T 3svt_A 95 VVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-GGGSFVGISSIAASNTH--------------- 158 (281)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCHHHHSCC---------------
T ss_pred EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCHHHcCCC---------------
Confidence 9999985 211 234578999999999999987753211 23489999998765310
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+ +...|+.+|...+ ...++.+.+++|+.|+++.......... ....+. ...|+
T Consensus 159 ---------~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~---~~~~~~--~~~p~-- 221 (281)
T 3svt_A 159 ---------R-WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAE---LSSDYA--MCTPL-- 221 (281)
T ss_dssp ---------T-TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHH---HHHHHH--HHCSS--
T ss_pred ---------C-CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHH---HHHHHH--hcCCC--
Confidence 0 1345888876544 3467999999999998874221100000 001111 11221
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc-HHHHHHHHHHHhCCCcc
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT-WKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s-~~el~~~ia~~~g~~~~ 270 (360)
..+.+++|+|+++++++.... ..|++|+|.+|..++ ..|+.+.+.+.+|.+..
T Consensus 222 ----------~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~ 277 (281)
T 3svt_A 222 ----------PRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDAL 277 (281)
T ss_dssp ----------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTGG
T ss_pred ----------CCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCccc
Confidence 234568999999998875432 359999999998877 77888888888887543
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=6.4e-16 Score=138.52 Aligned_cols=202 Identities=11% Similarity=0.045 Sum_probs=137.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
.||++++++|++ +|++|++++|++.... ....+++ ++.+|++|++++.++++.... +|+|||+|+....
T Consensus 18 giG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id~vi~~Ag~~~~ 89 (244)
T 3d3w_A 18 GIGRGTVQALHA------TGARVVAVSRTQADLDSLVRECPGIE-PVCVDLGDWEATERALGSVGP-VDLLVNNAAVALL 89 (244)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHTTCCC-CCEEEECCCCCCC
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHcCCCC-EEEEeCCCHHHHHHHHHHcCC-CCEEEECCccCCC
Confidence 389999999999 8999999999753210 0013578 889999999999999986543 8999999985321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.|+.++++++.+.++......+||++||...|... .
T Consensus 90 ~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------------------~ 144 (244)
T 3d3w_A 90 QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-------------------------T 144 (244)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-------------------------T
T ss_pred cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC-------------------------C
Confidence 234678999999999999987643211115799999987654310 1
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
+...|+.+|...+ ...+++++++||+.|+++.......... ....+. .+.| ..
T Consensus 145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~--~~~~------------~~ 207 (244)
T 3d3w_A 145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH---KAKTML--NRIP------------LG 207 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTT---HHHHHH--HTCT------------TC
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChH---HHHHHH--hhCC------------CC
Confidence 2445888887655 2358999999999999874211000000 000111 1111 13
Q ss_pred cccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 219 DMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
++++++|+|+++++++..+ ...|+.|++.+|...
T Consensus 208 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 243 (244)
T 3d3w_A 208 KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA 243 (244)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence 5678999999999988643 235899999887543
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.63 E-value=3.9e-16 Score=141.58 Aligned_cols=210 Identities=13% Similarity=0.068 Sum_probs=136.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ . ++|+|+|+|+
T Consensus 20 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~lv~~Ag 91 (259)
T 4e6p_A 20 IGRAFAEAYVR------EGATVAIADIDIERARQAAAEIGPAAY-AVQMDVTRQDSIDAAIAATVEHAG-GLDILVNNAA 91 (259)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHHHHSS-SCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhCCCce-EEEeeCCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 89999999999 9999999998753210 0124678 9999999999988877632 2 2799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++++++...++....-.+||++||...|...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------- 149 (259)
T 4e6p_A 92 LFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE---------------------- 149 (259)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------------------
T ss_pred cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC----------------------
Confidence 5321 234578899999999999987653211113589999987654310
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhc-CCCeeeeCCccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQ-GLPFRYLGNKYT 213 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~G~~~~ 213 (360)
+ +...|+.+|...+ ...++.+.+++|+.|++|..... . ..+....... +......++.
T Consensus 150 --~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~-- 218 (259)
T 4e6p_A 150 --A-LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV----D--ALFARYENRPRGEKKRLVGEA-- 218 (259)
T ss_dssp --T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH----H--HHHHHHHTCCTTHHHHHHHHH--
T ss_pred --C-CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh----h--hhhhhhccCChHHHHHHHhcc--
Confidence 1 1345888876544 34589999999999998742110 0 0111110000 0000001111
Q ss_pred ccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
.....+.+++|+|+++++++... ...|++|||.+|..+|
T Consensus 219 -~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 219 -VPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp -STTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred -CCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 13456788999999988876432 2348999999887654
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.5e-16 Score=135.84 Aligned_cols=175 Identities=12% Similarity=-0.005 Sum_probs=124.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-C--CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-F--PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
.||++++++|++ + +|++++|++.... . .... + ++.+|++|++++.++++... ++|+|||+|+....
T Consensus 11 ~iG~~la~~l~~------~--~V~~~~r~~~~~~~~~~~~~~-~-~~~~D~~~~~~~~~~~~~~~-~id~vi~~ag~~~~ 79 (207)
T 2yut_A 11 GLGGAFARALKG------H--DLLLSGRRAGALAELAREVGA-R-ALPADLADELEAKALLEEAG-PLDLLVHAVGKAGR 79 (207)
T ss_dssp HHHHHHHHHTTT------S--EEEEECSCHHHHHHHHHHHTC-E-ECCCCTTSHHHHHHHHHHHC-SEEEEEECCCCCCC
T ss_pred HHHHHHHHHHHh------C--CEEEEECCHHHHHHHHHhccC-c-EEEeeCCCHHHHHHHHHhcC-CCCEEEECCCcCCC
Confidence 379999999998 6 9999999753210 0 0011 7 89999999999999888311 17999999985321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.|+.++++++.+. +.++||++||..+|... .
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~sS~~~~~~~-------------------------~ 129 (207)
T 2yut_A 80 ASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-----KGARAVFFGAYPRYVQV-------------------------P 129 (207)
T ss_dssp BCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-----EEEEEEEECCCHHHHSS-------------------------T
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-----CCcEEEEEcChhhccCC-------------------------C
Confidence 34567899999999999999654 67899999998776420 1
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
+...|+.+|...+ ...+++++++||+.++|+... ..+. ...
T Consensus 130 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~-----------------~~~~------------~~~ 180 (207)
T 2yut_A 130 GFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA-----------------PLGG------------PPK 180 (207)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG-----------------GGTS------------CCT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc-----------------ccCC------------CCC
Confidence 2445888776554 246899999999999986310 0111 124
Q ss_pred cccCHHHHHHHHHHHHcCCCCCCCceec
Q 037566 219 DMSDSRVLAEQQIWAATTDRAKNQAFNC 246 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~~~~g~~yni 246 (360)
++++++|+|++++.++..+ ..++++||
T Consensus 181 ~~~~~~dva~~~~~~~~~~-~~~~~~~i 207 (207)
T 2yut_A 181 GALSPEEAARKVLEGLFRE-PVPALLEV 207 (207)
T ss_dssp TCBCHHHHHHHHHHHHC---CCCSCCCC
T ss_pred CCCCHHHHHHHHHHHHhCC-CCcccccC
Confidence 6789999999999888654 34566654
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=8.5e-16 Score=139.53 Aligned_cols=205 Identities=11% Similarity=0.019 Sum_probs=136.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C--C-CCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F--P-SSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~--~-~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|++.... . . ..++. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 19 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~lv 90 (263)
T 3ai3_A 19 IGLAIAEGFAK------EGAHIVLVARQVDRLHEAARSLKEKFGVRVL-EVAVDVATPEGVDAVVESVRSSFG-GADILV 90 (263)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHHCCCEE-EEECCTTSHHHHHHHHHHHHHHHS-SCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 8999999999753210 0 0 34678 8999999999988887632 1 179999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++. .+..+||++||...|...
T Consensus 91 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~------------------ 151 (263)
T 3ai3_A 91 NNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRA-RGGGAIIHNASICAVQPL------------------ 151 (263)
T ss_dssp ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGTSCC------------------
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCcEEEEECchhhcCCC------------------
Confidence 99985321 23457899999999999998653221 146899999998766410
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHH------HHHHHHHHHhhcCCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLL------TLAVYATICRHQGLP 204 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~------~~~~~~~~~~~~~~~ 204 (360)
+ +...|+.+|...+ ...|++++++||+.|++|.......... .-.....+.+ .+.|
T Consensus 152 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p 223 (263)
T 3ai3_A 152 ------W-YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVAD-EHAP 223 (263)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHH-HHCT
T ss_pred ------C-CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHh-cCCC
Confidence 1 1345888776544 2468999999999999974211000000 0000000100 0011
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 253 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s 253 (360)
...+.+++|+|+++++++..+. ..|++|++.+|..+|
T Consensus 224 ------------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 224 ------------IKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp ------------TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred ------------CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 2346789999999998876432 348999998887654
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.7e-15 Score=135.68 Aligned_cols=204 Identities=13% Similarity=0.066 Sum_probs=135.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~- 76 (360)
||++++++|++ +|++|++++|+.... .....+++ ++.+|++|.++++++++.+.. +|+|+|+|+...
T Consensus 28 IG~~~a~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~-iD~lv~nAg~~~~ 99 (291)
T 3rd5_A 28 LGAVTARELAR------RGATVIMAVRDTRKGEAAARTMAGQVE-VRELDLQDLSSVRRFADGVSG-ADVLINNAGIMAV 99 (291)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHTTSSSEEE-EEECCTTCHHHHHHHHHTCCC-EEEEEECCCCCSC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhcCCee-EEEcCCCCHHHHHHHHHhcCC-CCEEEECCcCCCC
Confidence 89999999999 899999999975321 11135788 999999999999999987743 899999998532
Q ss_pred ------CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC-CCCCCCCCC
Q 037566 77 ------KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK-EDSLRLPFP 149 (360)
Q Consensus 77 ------~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~-E~~p~~p~p 149 (360)
.+.+..+++|+.|+.++++++... ..+|||++||...|.... ...... |..+. .+
T Consensus 100 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-----~~~riv~isS~~~~~~~~-----------~~~~~~~~~~~~--~~ 161 (291)
T 3rd5_A 100 PYALTVDGFESQIGTNHLGHFALTNLLLPR-----LTDRVVTVSSMAHWPGRI-----------NLEDLNWRSRRY--SP 161 (291)
T ss_dssp CCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-----EEEEEEEECCGGGTTCCC-----------CSSCTTCSSSCC--CH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhheeEeechhhccCCC-----------CcccccccccCC--CC
Confidence 245578899999999999999887 457999999988775321 011112 22221 23
Q ss_pred CCcHHHHHHHHh----------cCCC--CcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 150 NFYYAVEDIAAS----------YSPA--VTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 150 ~~~Y~~ek~l~e----------~~~~--~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
...|+.+|...+ ...+ +.+..++|+.|..+-....... ....+ ...+..
T Consensus 162 ~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~-----~~~~~---~~~~~~----------- 222 (291)
T 3rd5_A 162 WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK-----LGDAL---MSAATR----------- 222 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------------------------------
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH-----HHHHH---HHHHHH-----------
Confidence 456988886544 2234 9999999999976532221100 00000 011110
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCceeccCCC
Q 037566 218 CDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGD 250 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~ 250 (360)
+-..+.+++|+++++++..+...|+.|++.+|.
T Consensus 223 ~~~~~~~~~A~~~~~l~~~~~~~G~~~~vdgG~ 255 (291)
T 3rd5_A 223 VVATDADFGARQTLYAASQDLPGDSFVGPRFGY 255 (291)
T ss_dssp --CHHHHHHHHHHHHHHHSCCCTTCEEEETTSS
T ss_pred HHhCCHHHHHHHHHHHHcCCCCCCceeCCcccc
Confidence 112247889999999988765668888876543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.61 E-value=4.2e-15 Score=133.54 Aligned_cols=198 Identities=10% Similarity=0.017 Sum_probs=132.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|++... .....+++ ++.+|++|++++.++++.+ . ++|+||
T Consensus 14 iG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~li 85 (250)
T 2cfc_A 14 NGLAIATRFLA------RGDRVAALDLSAETLEETARTHWHAYADKVL-RVRADVADEGDVNAAIAATMEQFG-AIDVLV 85 (250)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHSTTTGGGEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHHhC-CCCEEE
Confidence 79999999999 899999999975321 00134678 8999999999988887632 1 179999
Q ss_pred EeeeecCC------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 70 WVMFQRLK------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 70 h~A~~~~~------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+|+.... +.+..+++|+.|+.++++++...++. .+.++||++||...|...
T Consensus 86 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~--------------- 149 (250)
T 2cfc_A 86 NNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLL-QGAGVIVNIASVASLVAF--------------- 149 (250)
T ss_dssp ECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGTSCC---------------
T ss_pred ECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-CCCCEEEEECChhhccCC---------------
Confidence 99985321 23457899999998888877653221 146899999987655310
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+ +...|+.+|...+ ...+++++++||+.|+++......... .....+. .+.|+
T Consensus 150 ---------~-~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~--~~~~~-- 212 (250)
T 2cfc_A 150 ---------P-GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQP---ELRDQVL--ARIPQ-- 212 (250)
T ss_dssp ---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSH---HHHHHHH--TTCTT--
T ss_pred ---------C-CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCH---HHHHHHH--hcCCC--
Confidence 1 2345888776554 235899999999999998532101100 0111111 11221
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
..+.+.+|+|+++++++..+. ..|+.|++.+|.
T Consensus 213 ----------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 213 ----------KEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp ----------CSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred ----------CCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence 235678999999998886543 348999997764
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.1e-15 Score=135.53 Aligned_cols=203 Identities=10% Similarity=0.044 Sum_probs=131.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCC--C-------CCceeeEeeccCChHHHHHHHccCCC---C
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFP--S-------SHVDHYITFDALDSTDTTQKLSSISQ---E 64 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~--~-------~~v~~~v~gDl~d~~~l~~~l~~~~~---~ 64 (360)
||++++++|++ +|++|++++|++... ... . .++. ++.+|++|++++.++++++.. .
T Consensus 19 iG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (264)
T 2pd6_A 19 IGRAVSVRLAG------EGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHA-AFQADVSEARAARCLLEQVQACFSR 91 (264)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHTC------------CCE-EEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceE-EEEecCCCHHHHHHHHHHHHHHhCC
Confidence 79999999999 899999999974321 010 1 4678 999999999998888765410 1
Q ss_pred c-cEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccccccccCCcccCCcC
Q 037566 65 V-THLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 65 v-~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
+ |+|||+|+.... +.+..+++|+.|+.++++++.+.++.. + ..+||++||...+..
T Consensus 92 i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~g~iv~isS~~~~~~------------ 158 (264)
T 2pd6_A 92 PPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSN-GCRGSIINISSIVGKVG------------ 158 (264)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEEECCTHHHHC------------
T ss_pred CCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCceEEEECChhhccC------------
Confidence 4 899999985321 234578999999999999987653211 2 468999998754321
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGL 203 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~ 203 (360)
. + +...|+.+|...+ ...+++++++||+.|+++........ ....+. .+.
T Consensus 159 --~----------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~ 218 (264)
T 2pd6_A 159 --N----------V-GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQK-----VVDKIT--EMI 218 (264)
T ss_dssp --C----------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---------------CTG--GGC
T ss_pred --C----------C-CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHH-----HHHHHH--HhC
Confidence 0 0 2445888887444 23689999999999999854221100 000000 011
Q ss_pred CeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccHHH
Q 037566 204 PFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWKS 256 (360)
Q Consensus 204 ~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~~e 256 (360)
| ...+.+.+|+|+++++++..+ ...|+.|++.+|..+++..
T Consensus 219 ~------------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~ 261 (264)
T 2pd6_A 219 P------------MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENL 261 (264)
T ss_dssp T------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred C------------CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence 1 124567899999999887542 2458999998888766554
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-14 Score=130.98 Aligned_cols=201 Identities=11% Similarity=0.062 Sum_probs=133.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ . ++|+++|+|+
T Consensus 19 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg 90 (257)
T 3tpc_A 19 LGAAVTRMLAQ------EGATVLGLDLKPPAGEEPAAELGAAVR-FRNADVTNEADATAALAFAKQEFG-HVHGLVNCAG 90 (257)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCC------------CE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChHHHHHHHHHhCCceE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 79999999999 9999999999865421 1134678 9999999999988887633 1 1799999998
Q ss_pred ecCC-------------ChhHhhhhhHHHHHHHHHHHHhhccCC-----CCccEEEEeccCccccccccCCcccCCcCCC
Q 037566 74 QRLK-------------SEEINISNNSTMFKNVMSVVVDSNKGR-----SRLRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 74 ~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~~~-----~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
.... +.+..+++|+.|+.++++++...++.. .+-.+||++||...+...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~------------- 157 (257)
T 3tpc_A 91 TAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ------------- 157 (257)
T ss_dssp CCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-------------
T ss_pred CCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC-------------
Confidence 5321 234578999999999999998764321 135689999998665310
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCe
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|.++........ ....+. ...|
T Consensus 158 -----------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-----~~~~~~--~~~p- 217 (257)
T 3tpc_A 158 -----------I-GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD-----VQDALA--ASVP- 217 (257)
T ss_dssp -----------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------------CCSS-
T ss_pred -----------C-CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH-----HHHHHH--hcCC-
Confidence 0 1345888875433 34689999999999988743221110 000000 1111
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCccc
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFT 253 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s 253 (360)
.+ ..+.+.+|+|+++++++......|++++|.+|..++
T Consensus 218 -~~---------~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 218 -FP---------PRLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp -SS---------CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred -CC---------CCCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence 11 235678999999999887655669999998886654
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-14 Score=131.03 Aligned_cols=200 Identities=12% Similarity=0.054 Sum_probs=134.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++|+++|++ +|++|++++|++... . ....+++ ++.+|++|++++.++++.+ . ++|+|||
T Consensus 25 iG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~ 96 (260)
T 3awd_A 25 IGLACVTALAE------AGARVIIADLDEAMATKAVEDLRMEGHDVS-SVVMDVTNTESVQNAVRSVHEQEG-RVDILVA 96 (260)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 899999999975321 0 0134688 9999999999988887632 1 1799999
Q ss_pred eeeecC-C------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRL-K------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~-~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+... . + ....+++|+.|+.++++++...++. .+..+||++||...+.. .
T Consensus 97 ~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~~sS~~~~~~---------------~--- 157 (260)
T 3awd_A 97 CAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLE-QKQGVIVAIGSMSGLIV---------------N--- 157 (260)
T ss_dssp CCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGTSC---------------C---
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhh-cCCCEEEEEecchhccc---------------C---
Confidence 998532 1 1 2457899999999999998753211 14679999988754321 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ +.|...|+.+|...+ ...+++++++||+.|++|........ . .....+. .+.|+
T Consensus 158 ---~--~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~-~~~~~~~--~~~~~----- 222 (260)
T 3awd_A 158 ---R--PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEK--P-ELYDAWI--AGTPM----- 222 (260)
T ss_dssp ---S--SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTC--H-HHHHHHH--HTCTT-----
T ss_pred ---C--CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCC--h-HHHHHHH--hcCCc-----
Confidence 1 112356888887555 23689999999999999854201100 0 0111111 12221
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..+.+.+|+|+++++++..+ ...|++||+.+|.
T Consensus 223 -------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 223 -------GRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp -------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred -------CCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence 23567899999999887542 2358999998775
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=8.7e-15 Score=131.62 Aligned_cols=196 Identities=13% Similarity=0.106 Sum_probs=133.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|+++++++++.+ . ++|+|+
T Consensus 16 IG~~ia~~l~~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~id~lv 87 (246)
T 3osu_A 16 IGRSIALQLAE------EGYNVAVNYAGSKEKAEAVVEEIKAKGVDSF-AIQANVADADEVKAMIKEVVSQFG-SLDVLV 87 (246)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTSCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 89999999999 999999988864221 0 0134678 8999999999988887643 1 179999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 88 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 148 (246)
T 3osu_A 88 NNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSVVGAVGN------------------ 148 (246)
T ss_dssp ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCC------------------
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcCCC------------------
Confidence 99985321 234578999999999999995432101 45799999987654310
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
| +...|+.+|...+ ...|+.+.+++|+.|+++......... ...+. .+.|+
T Consensus 149 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-----~~~~~--~~~p~----- 209 (246)
T 3osu_A 149 ------P-GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDEL-----KEQML--TQIPL----- 209 (246)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHH-----HHHHH--TTCTT-----
T ss_pred ------C-CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHH-----HHHHH--hcCCC-----
Confidence 0 2345888886433 356899999999999998643322211 11111 12222
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
..+.+.+|+|+++++++..+. ..|++|||.+|.
T Consensus 210 -------~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 210 -------ARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp -------CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred -------CCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 234567899999998875432 349999998775
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.59 E-value=4.4e-15 Score=134.86 Aligned_cols=199 Identities=10% Similarity=0.041 Sum_probs=122.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccC-----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSI-----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~-----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|++.... ....++. ++.+|++|++++.++++.+ . ++|+||
T Consensus 26 iG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~-~id~li 97 (266)
T 1xq1_A 26 IGHAIVEEFAG------FGAVIHTCARNEYELNECLSKWQKKGFQVT-GSVCDASLRPEREKLMQTVSSMFGG-KLDILI 97 (266)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHHHHHTT-CCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeeE-EEECCCCCHHHHHHHHHHHHHHhCC-CCcEEE
Confidence 79999999999 8999999999753210 0124678 8999999999988887642 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++ ..+.++||++||...|...
T Consensus 98 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~~------------------ 158 (266)
T 1xq1_A 98 NNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLK-ASGCGNIIFMSSIAGVVSA------------------ 158 (266)
T ss_dssp EECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSSCEEEEEC--------------------------
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEccchhccCC------------------
Confidence 99985321 2345789999999999999853211 0157899999997655310
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ +...|+.+|...+ ...+++++++||+.|++|........ .....+. ...|
T Consensus 159 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~--~~~~------ 219 (266)
T 1xq1_A 159 ------S-VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD----EFKKVVI--SRKP------ 219 (266)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------------
T ss_pred ------C-CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCH----HHHHHHH--hcCC------
Confidence 0 1345888776554 23589999999999999854321100 0000000 0111
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
...+.+.+|+|+++++++..+ ...|++|++.+|..+
T Consensus 220 ------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 257 (266)
T 1xq1_A 220 ------LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTV 257 (266)
T ss_dssp ----------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEE
T ss_pred ------CCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCccc
Confidence 123567888999988877532 235899999888643
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=7.3e-15 Score=132.42 Aligned_cols=198 Identities=13% Similarity=0.074 Sum_probs=133.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecC-CCCCC-------CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARR-PPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~-~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++++++|++ +|++|++++|+ +.... ....+++ ++.+|++|++++.++++.+ . ++|+|
T Consensus 18 giG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~v 89 (258)
T 3afn_B 18 GIGLATARLFAR------AGAKVGLHGRKAPANIDETIASMRADGGDAA-FFAADLATSEACQQLVDEFVAKFG-GIDVL 89 (258)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSCCTTHHHHHHHHHHTTCEEE-EEECCTTSHHHHHHHHHHHHHHHS-SCSEE
T ss_pred hHHHHHHHHHHH------CCCEEEEECCCchhhHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 389999999999 89999999998 43210 0134688 9999999999998887732 1 17999
Q ss_pred EEeeee-cCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCC--c---cEEEEeccCccccccccCCcccCCcC
Q 037566 69 FWVMFQ-RLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSR--L---RHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 69 ~h~A~~-~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~--v---~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
||+|+. ... +.+..+++|+.|+.++++++...++.. + . .+||++||...+..
T Consensus 90 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~~~~~~iv~~sS~~~~~~------------ 156 (258)
T 3afn_B 90 INNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAA-AKASGQTSAVISTGSIAGHTG------------ 156 (258)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-HHHHTSCEEEEEECCTHHHHC------------
T ss_pred EECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-ccCCCCCcEEEEecchhhccC------------
Confidence 999985 211 134578999999999999886532100 1 2 78999988754421
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGL 203 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~ 203 (360)
. .+ +...|+.+|...+ ...+++++++||+.|+++........ ....+. .+.
T Consensus 157 --~---------~~-~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~ 217 (258)
T 3afn_B 157 --G---------GP-GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQD-----VRDRIS--NGI 217 (258)
T ss_dssp --C---------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHH-----HHHHHH--TTC
T ss_pred --C---------CC-CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHH-----HHHHHh--ccC
Confidence 0 01 2445888876554 23589999999999999864322111 111111 122
Q ss_pred CeeeeCCcccccccccccCHHHHHHHHHHHHcCC---CCCCCceeccCCC
Q 037566 204 PFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD---RAKNQAFNCTNGD 250 (360)
Q Consensus 204 ~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~---~~~g~~yni~~g~ 250 (360)
| ..++++++|+|+++++++..+ ...|++|||.+|.
T Consensus 218 ~------------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 218 P------------MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp T------------TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred C------------CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 2 124677889999999887543 2358999998775
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-14 Score=130.41 Aligned_cols=197 Identities=13% Similarity=0.067 Sum_probs=132.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~- 76 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|.+++.++++.... +|+|+|+|+...
T Consensus 26 IG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id~li~~Ag~~~~ 97 (249)
T 3f9i_A 26 IGSAIARLLHK------LGSKVIISGSNEEKLKSLGNALKDNYT-IEVCNLANKEECSNLISKTSN-LDILVCNAGITSD 97 (249)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCSSEE-EEECCTTSHHHHHHHHHTCSC-CSEEEECCC----
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHhccCcc-EEEcCCCCHHHHHHHHHhcCC-CCEEEECCCCCCC
Confidence 79999999999 8999999999753210 0124678 899999999999999987643 899999998532
Q ss_pred --------CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 77 --------KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 77 --------~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
.+.+..+++|+.|+.++++++...++. .+..+||++||...|... +
T Consensus 98 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~isS~~~~~~~------------------------~- 151 (249)
T 3f9i_A 98 TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQ-KRYGRIINISSIVGIAGN------------------------P- 151 (249)
T ss_dssp ---------CHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCCCC--CC------------------------S-
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEEccHHhccCC------------------------C-
Confidence 245678899999999999988653211 145689999997655310 1
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
+...|+.+|...+ ...++.+.+++|+.|.++......... ...+. .+.+ ..
T Consensus 152 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----~~~~~--~~~~------------~~ 212 (249)
T 3f9i_A 152 GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQ-----REAIV--QKIP------------LG 212 (249)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHH-----HHHHH--HHCT------------TC
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHH-----HHHHH--hcCC------------CC
Confidence 2445888886443 346899999999999887533221111 00111 1111 23
Q ss_pred cccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 219 DMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
.+.+.+|+|+++++++..+. ..|++|+|.+|..
T Consensus 213 ~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 213 TYGIPEDVAYAVAFLASNNASYITGQTLHVNGGML 247 (249)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred CCcCHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence 46678999999998876432 3499999988764
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=4.6e-15 Score=134.41 Aligned_cols=205 Identities=10% Similarity=0.077 Sum_probs=136.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C---CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F---PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~---~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+..... . ...+++ ++.+|++|+++++++++.+ . ++|+|+
T Consensus 26 iG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~-~id~li 97 (265)
T 1h5q_A 26 IGLAFTRAVAA------AGANVAVIYRSAADAVEVTEKVGKEFGVKTK-AYQCDVSNTDIVTKTIQQIDADLG-PISGLI 97 (265)
T ss_dssp HHHHHHHHHHH------TTEEEEEEESSCTTHHHHHHHHHHHHTCCEE-EEECCTTCHHHHHHHHHHHHHHSC-SEEEEE
T ss_pred HHHHHHHHHHH------CCCeEEEEeCcchhhHHHHHHHHHhcCCeeE-EEEeeCCCHHHHHHHHHHHHHhcC-CCCEEE
Confidence 89999999999 8999999999654310 0 034688 9999999999988877653 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++......+||++||...+... . .
T Consensus 98 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------~---~ 161 (265)
T 1h5q_A 98 ANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN-------------Q---S 161 (265)
T ss_dssp ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-------------E---E
T ss_pred ECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccc-------------c---c
Confidence 99985321 234568999999999999987642211124789999997765321 0 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+..+. .|...|+.+|...+ ...+++++++||+.|+++......... ...+. ...|+
T Consensus 162 ~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~--~~~~~----- 227 (265)
T 1h5q_A 162 SLNGS--LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKI-----RDHQA--SNIPL----- 227 (265)
T ss_dssp ETTEE--CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHH-----HHHHH--HTCTT-----
T ss_pred ccccc--ccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhH-----HHHHH--hcCcc-----
Confidence 01111 23556888876554 245899999999999987532211110 01111 11221
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
..+.+.+|+|+++++++..+. ..|+.|++.+|..
T Consensus 228 -------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 228 -------NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp -------SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred -------cCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence 135567889999888875432 4589999988754
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.2e-14 Score=126.27 Aligned_cols=170 Identities=11% Similarity=0.049 Sum_probs=123.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
+||++++++|++ |++|++++|++. ++.+|++|+++++++++++.. +|+|||+|+....
T Consensus 14 ~iG~~~~~~l~~-------g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~-~d~vi~~ag~~~~~~~ 74 (202)
T 3d7l_A 14 TLGSAVKERLEK-------KAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGK-VDAIVSATGSATFSPL 74 (202)
T ss_dssp HHHHHHHHHHTT-------TSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCC-EEEEEECCCCCCCCCG
T ss_pred HHHHHHHHHHHC-------CCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCC-CCEEEECCCCCCCCCh
Confidence 389999999974 899999998642 578999999999998887542 7999999984321
Q ss_pred ---C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCC
Q 037566 78 ---S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNF 151 (360)
Q Consensus 78 ---~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~ 151 (360)
+ ....+++|+.|+.++++++.+.++ .-.+||++||...|.. . .+..
T Consensus 75 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~iv~~sS~~~~~~-----------------~--------~~~~ 126 (202)
T 3d7l_A 75 TELTPEKNAVTISSKLGGQINLVLLGIDSLN---DKGSFTLTTGIMMEDP-----------------I--------VQGA 126 (202)
T ss_dssp GGCCHHHHHHHHHTTTHHHHHHHHTTGGGEE---EEEEEEEECCGGGTSC-----------------C--------TTCH
T ss_pred hhCCHHHHHHHHhhccHHHHHHHHHHHHHhc---cCCEEEEEcchhhcCC-----------------C--------CccH
Confidence 2 235678999999999999987532 1268999988754421 0 1234
Q ss_pred cHHHHHHHHh------c---CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccC
Q 037566 152 YYAVEDIAAS------Y---SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSD 222 (360)
Q Consensus 152 ~Y~~ek~l~e------~---~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~ 222 (360)
.|+.+|...+ . ..+++++++||+.++|+... . ..+. ...++++
T Consensus 127 ~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~--------------~--~~~~------------~~~~~~~ 178 (202)
T 3d7l_A 127 SAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK--------------L--EPFF------------EGFLPVP 178 (202)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH--------------H--GGGS------------TTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh--------------h--hhhc------------cccCCCC
Confidence 5888887665 1 24899999999999986310 0 0011 1235778
Q ss_pred HHHHHHHHHHHHcCCCCCCCceec
Q 037566 223 SRVLAEQQIWAATTDRAKNQAFNC 246 (360)
Q Consensus 223 v~dla~a~~~a~~~~~~~g~~yni 246 (360)
++|+|++++.++. ....|++|||
T Consensus 179 ~~dva~~~~~~~~-~~~~G~~~~v 201 (202)
T 3d7l_A 179 AAKVARAFEKSVF-GAQTGESYQV 201 (202)
T ss_dssp HHHHHHHHHHHHH-SCCCSCEEEE
T ss_pred HHHHHHHHHHhhh-ccccCceEec
Confidence 9999999888774 4456899987
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.8e-14 Score=129.17 Aligned_cols=195 Identities=13% Similarity=0.032 Sum_probs=124.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEe-cCCCCCC-----C--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTA-RRPPPSW-----F--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~-r~~~~~~-----~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++ |++.... . ...++. ++.+|++|+++++++++.+ . ++|+||
T Consensus 17 iG~~~a~~l~~------~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi 88 (247)
T 2hq1_A 17 LGKAIAWKLGN------MGANIVLNGSPASTSLDATAEEFKAAGINVV-VAKGDVKNPEDVENMVKTAMDAFG-RIDILV 88 (247)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECTTCSHHHHHHHHHHHTTCCEE-EEESCTTSHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCcCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHhcC-CCCEEE
Confidence 79999999999 899999994 4432110 0 134688 9999999999988887632 1 179999
Q ss_pred EeeeecC---------CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc-cccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRL---------KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK-HYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~---------~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~-vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+... .+.+..+++|+.|+.++++++...++. .+..+||++||.. .|+.
T Consensus 89 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~~~iv~~sS~~~~~~~------------------ 149 (247)
T 2hq1_A 89 NNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLK-QKSGKIINITSIAGIIGN------------------ 149 (247)
T ss_dssp ECC---------------CHHHHHHTHHHHHHHHHHHHHHHHH-HTCEEEEEECC-------------------------
T ss_pred ECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCcEEEEEcChhhccCC------------------
Confidence 9998532 134568899999999999988753211 1467999999863 3321
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ +...|+.+|...+ ...++++.+++|+.+.++........ ....+. .+.|
T Consensus 150 -------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~~----- 209 (247)
T 2hq1_A 150 -------A-GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDK-----VKEMYL--NNIP----- 209 (247)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH-----HHHHHH--TTST-----
T ss_pred -------C-CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchH-----HHHHHH--hhCC-----
Confidence 0 1345888876544 24589999999998877532111110 001110 1112
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
...+.+++|+|+++++++..+ ...|++|||.+|.
T Consensus 210 -------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 210 -------LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp -------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred -------CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence 124678999999998887543 2358999998775
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=7.2e-15 Score=131.77 Aligned_cols=197 Identities=11% Similarity=0.058 Sum_probs=131.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C---CCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F---PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~---~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++++++|++ +|++|++++|++.... . ...++. ++.+|++|++++.++++.+ . ++|+|
T Consensus 18 giG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~~d~v 89 (248)
T 2pnf_A 18 GIGRAIAEKLAS------AGSTVIITGTSGERAKAVAEEIANKYGVKAH-GVEMNLLSEESINKAFEEIYNLVD-GIDIL 89 (248)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHHHHHCCCEE-EEECCTTCHHHHHHHHHHHHHHSS-CCSEE
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCChHHHHHHHHHHHhhcCCceE-EEEccCCCHHHHHHHHHHHHHhcC-CCCEE
Confidence 379999999999 8999999999753210 0 124678 8999999999998887632 1 17999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||+|+.... +.+..+++|+.|+.++++++.+.++ ..+.++||++||...+...
T Consensus 90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~----------------- 151 (248)
T 2pnf_A 90 VNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMI-KQRWGRIVNISSVVGFTGN----------------- 151 (248)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHH-HHTCEEEEEECCHHHHHCC-----------------
T ss_pred EECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCcEEEEEccHHhcCCC-----------------
Confidence 999985321 2346789999999888877654321 0156899999987543210
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ +...|+.+|...+ ...++.++++||+.++++........ ....+. ...|.
T Consensus 152 -------~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~~~---- 212 (248)
T 2pnf_A 152 -------V-GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEE-----IKQKYK--EQIPL---- 212 (248)
T ss_dssp -------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH-----HHHHHH--HTCTT----
T ss_pred -------C-CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHH-----HHHHHH--hcCCC----
Confidence 0 1334887776443 24589999999999999753221111 011111 11121
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..+.+.+|+|+++++++..+ ...|++|++.+|.
T Consensus 213 --------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 213 --------GRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM 247 (248)
T ss_dssp --------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred --------CCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence 23568899999999887542 2358999998763
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-14 Score=129.78 Aligned_cols=198 Identities=14% Similarity=0.092 Sum_probs=134.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||++++++|++ +|++|++++|++... .....+++ ++.+|++|++++.++++.+ . ++|+|||+
T Consensus 18 iG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~~ 89 (251)
T 1zk4_A 18 IGLAIATKFVE------EGAKVMITGRHSDVGEKAAKSVGTPDQIQ-FFQHDSSDEDGWTKLFDATEKAFG-PVSTLVNN 89 (251)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCCTTTEE-EEECCTTCHHHHHHHHHHHHHHHS-SCCEEEEC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhhccCceE-EEECCCCCHHHHHHHHHHHHHHhC-CCCEEEEC
Confidence 79999999999 899999999975321 00114688 9999999999988887653 1 27999999
Q ss_pred eeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCc-cEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 72 MFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRL-RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 72 A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v-~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
|+.... +.+..+++|+.|+.++.+++...++.. +. .+||++||...|...
T Consensus 90 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~------------------- 149 (251)
T 1zk4_A 90 AGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK-GLGASIINMSSIEGFVGD------------------- 149 (251)
T ss_dssp CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEEEEEECCGGGTSCC-------------------
T ss_pred CCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCCEEEEeCCchhccCC-------------------
Confidence 985321 234578999999988888776543212 45 799999998665310
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------c--CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------Y--SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~--~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ +...|+.+|...+ . ..+++++++||+.|+++........ .. ........
T Consensus 150 -----~-~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-----~~---~~~~~~~~---- 211 (251)
T 1zk4_A 150 -----P-SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA-----EE---AMSQRTKT---- 211 (251)
T ss_dssp -----T-TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH-----HH---HHTSTTTC----
T ss_pred -----C-CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCch-----hh---hHHHhhcC----
Confidence 1 2345888776544 2 6789999999999999743221110 00 00011111
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
....+.+.+|+|+++++++..+. ..|+.|++.+|..
T Consensus 212 ------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 212 ------PMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp ------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ------CCCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence 11246789999999998876432 3589999988754
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=8.7e-15 Score=133.23 Aligned_cols=198 Identities=10% Similarity=-0.033 Sum_probs=132.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC-C-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP-S-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~-~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++|+++|++ +|++|++++|+... . .+ ...++. ++.+|++|++++.++++.+ .. +|+||
T Consensus 33 iG~~la~~l~~------~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~-~d~vi 104 (274)
T 1ja9_A 33 IGRGIAIELGR------RGASVVVNYGSSSKAAEEVVAELKKLGAQGV-AIQADISKPSEVVALFDKAVSHFGG-LDFVM 104 (274)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHHHHHSC-EEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCchHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHHcCC-CCEEE
Confidence 79999999999 89999999984221 0 00 134678 8999999999988887632 11 79999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccc-cccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHY-MGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vY-g~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+.... +.+..+++|+.|+.++++++.+.++ .+ .+||++||..+| +..
T Consensus 105 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~-~~iv~~sS~~~~~~~~----------------- 164 (274)
T 1ja9_A 105 SNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR--RG-GRIILTSSIAAVMTGI----------------- 164 (274)
T ss_dssp CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE--EE-EEEEEECCGGGTCCSC-----------------
T ss_pred ECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hC-CEEEEEcChHhccCCC-----------------
Confidence 99985321 2346789999999999999987642 13 699999998766 310
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcc---------hhHHHHHHHHHHHhh
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLN---------NSLLTLAVYATICRH 200 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~---------~~~~~~~~~~~~~~~ 200 (360)
+ +...|+.+|...+ ...++.++++||+.|+++...... ..... .....+.
T Consensus 165 -------~-~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 233 (274)
T 1ja9_A 165 -------P-NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQE-KIDEGLA-- 233 (274)
T ss_dssp -------C-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHH-HHHHHHH--
T ss_pred -------C-CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchH-HHHHHHH--
Confidence 0 1335888877655 235899999999999886321000 00000 0000000
Q ss_pred cCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 201 QGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 201 ~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
.+. ...++++++|+|+++++++..+. ..|++|||++|.
T Consensus 234 ~~~------------~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 234 NMN------------PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp HTS------------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred hcC------------CCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence 011 22457889999999998886432 258999998763
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=7.4e-15 Score=133.09 Aligned_cols=201 Identities=13% Similarity=0.014 Sum_probs=134.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|++... . ....++. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 26 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~iD~lv~ 97 (260)
T 2zat_A 26 IGLAIARRLAQ------DGAHVVVSSRKQENVDRTVATLQGEGLSVT-GTVCHVGKAEDRERLVAMAVNLHG-GVDILVS 97 (260)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 899999999975321 0 0134678 8999999999888777632 1 1799999
Q ss_pred eeeecC--C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRL--K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+... . +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 98 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 158 (260)
T 2zat_A 98 NAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVSSVGAYHPF------------------ 158 (260)
T ss_dssp CCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCC------------------
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEechhhcCCC------------------
Confidence 998532 1 234578999999999999986533211 46899999998765310
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ +...|+.+|...+ ...++.+.+++|+.|.++.......... ....+.. ..|
T Consensus 159 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~--~~~------ 220 (260)
T 2zat_A 159 ------P-NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKA---RKEYMKE--SLR------ 220 (260)
T ss_dssp ------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHH---HHHHHHH--HHT------
T ss_pred ------C-CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChH---HHHHHHh--cCC------
Confidence 1 2345888776544 3458999999999998763211000000 0000100 011
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 253 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s 253 (360)
...+.+.+|+|+++++++..+. ..|++|+|.+|..+|
T Consensus 221 ------~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 221 ------IRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp ------CSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred ------CCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence 1245678889999888875432 358999999988765
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-14 Score=131.17 Aligned_cols=197 Identities=10% Similarity=0.008 Sum_probs=132.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~ 75 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|+|+|+..
T Consensus 39 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~lv~nAg~~ 110 (260)
T 3gem_A 39 VGLHCALRLLE------HGHRVIISYRTEHASVTELRQAGAV-ALYGDFSCETGIMAFIDLLKTQTS-SLRAVVHNASEW 110 (260)
T ss_dssp HHHHHHHHHHH------TTCCEEEEESSCCHHHHHHHHHTCE-EEECCTTSHHHHHHHHHHHHHHCS-CCSEEEECCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChHHHHHHHHhcCCe-EEECCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCcc
Confidence 89999999999 899999999986431 01123478 9999999999988877643 2 289999999853
Q ss_pred CC--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 76 LK--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 76 ~~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
.. +.+..+++|+.|+.++++++...++.. +..+||++||...+... +
T Consensus 111 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~------------------------~ 165 (260)
T 3gem_A 111 LAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-EVADIVHISDDVTRKGS------------------------S 165 (260)
T ss_dssp CCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGTCC------------------------S
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhhcCCC------------------------C
Confidence 21 223578999999999999987644322 45789999987654310 1
Q ss_pred CCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 148 FPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
+...|+.+|...+ ...++.+.+++|+.|..+..... . ....+. ...|+ .
T Consensus 166 -~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~-~------~~~~~~--~~~p~------------~ 223 (260)
T 3gem_A 166 -KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA-A------YRANAL--AKSAL------------G 223 (260)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------------CCS------------C
T ss_pred -CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH-H------HHHHHH--hcCCC------------C
Confidence 2345888876443 23369999999999987642110 0 000000 11121 1
Q ss_pred cccCHHHHHHHHHHHHcCCCCCCCceeccCCCccc
Q 037566 219 DMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFT 253 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s 253 (360)
-+.+.+|+|+++++++..+...|++|+|.+|..++
T Consensus 224 r~~~~edva~~v~~L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 224 IEPGAEVIYQSLRYLLDSTYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp CCCCTHHHHHHHHHHHHCSSCCSCEEEESTTTTTC
T ss_pred CCCCHHHHHHHHHHHhhCCCCCCCEEEECCCcccC
Confidence 23457889999998886666679999998887664
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.2e-14 Score=126.30 Aligned_cols=203 Identities=13% Similarity=0.022 Sum_probs=125.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~~ 77 (360)
||++++++|++ +|++|++++|++... ..++. ++.+|++|++++.++++.+ . ++|+|||+|+....
T Consensus 19 iG~~ia~~l~~------~G~~V~~~~r~~~~~---~~~~~-~~~~D~~d~~~~~~~~~~~~~~~g-~id~lv~~Ag~~~~ 87 (250)
T 2fwm_X 19 IGYATALAFVE------AGAKVTGFDQAFTQE---QYPFA-TEVMDVADAAQVAQVCQRLLAETE-RLDALVNAAGILRM 87 (250)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCCCSS---CCSSE-EEECCTTCHHHHHHHHHHHHHHCS-CCCEEEECCCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCchhhh---cCCce-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCC
Confidence 79999999999 899999999976431 12378 8999999999988887632 2 27999999985321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.|+.++++++...++.. +..+||++||...+.. .+
T Consensus 88 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~------------------------~~- 141 (250)
T 2fwm_X 88 GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVASDAAHTP------------------------RI- 141 (250)
T ss_dssp CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSC------------------------CT-
T ss_pred CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCCC------------------------CC-
Confidence 245678999999999999985432211 4679999998765421 01
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHH-HHHhhcCCCeeeeCCccccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYA-TICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
+...|+.+|...+ ...++.+.++||+.|+++......... .... .+.. ..... ... ...
T Consensus 142 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~-~~~~~---~~~---~p~ 211 (250)
T 2fwm_X 142 GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSD---DAEEQRIRG-FGEQF---KLG---IPL 211 (250)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------------
T ss_pred CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccCh---hHHHHHHhh-hhhcc---ccc---CCC
Confidence 2345888776544 345899999999999987532210000 0000 0000 00000 000 011
Q ss_pred ccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 218 CDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
..+.+.+|+|+++++++..+ ...|+.+++.+|..
T Consensus 212 ~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 212 GKIARPQEIANTILFLASDLASHITLQDIVVDGGST 247 (250)
T ss_dssp ----CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 23567899999999887643 23589999977754
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=4.1e-15 Score=135.29 Aligned_cols=212 Identities=13% Similarity=0.066 Sum_probs=137.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+ . ++|+|
T Consensus 19 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~l 90 (267)
T 2gdz_A 19 IGRAFAEALLL------KGAKVALVDWNLEAGVQCKAALHEQFEPQKTL-FIQCDVADQQQLRDTFRKVVDHFG-RLDIL 90 (267)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhhcCCCceE-EEecCCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 79999999999 899999999974321 00123578 8999999999988887653 2 27999
Q ss_pred EEeeeec-CCChhHhhhhhHHHHHHHHHHHHhhccCCC--CccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 69 FWVMFQR-LKSEEINISNNSTMFKNVMSVVVDSNKGRS--RLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 69 ~h~A~~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~~~--~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
+|+|+.. ..+.+..+++|+.|+.++.+++.+.++... +..+||++||...|...
T Consensus 91 v~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------- 147 (267)
T 2gdz_A 91 VNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV----------------------- 147 (267)
T ss_dssp EECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------------------
T ss_pred EECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----------------------
Confidence 9999864 346778899999977766666554332111 25799999997655310
Q ss_pred CCCCCCcHHHHHHHHh------------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 146 LPFPNFYYAVEDIAAS------------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e------------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
+ +...|+.+|...+ ...++.+.+++|+.|.++........ .....+....+....++
T Consensus 148 -~-~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~-------- 216 (267)
T 2gdz_A 148 -A-QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKE-ENMGQYIEYKDHIKDMI-------- 216 (267)
T ss_dssp -T-TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCH-HHHGGGGGGHHHHHHHH--------
T ss_pred -C-CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccc-cccchhhhHHHHHHHHh--------
Confidence 0 1334777664322 35789999999999987631110000 00000000000000000
Q ss_pred ccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHH
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSL 257 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el 257 (360)
....+++.+|+|+++++++..+...|++|+|.+|+.+++.|+
T Consensus 217 --~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 217 --KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp --HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred --ccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence 112356899999999998876656799999999998877643
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.7e-15 Score=133.68 Aligned_cols=197 Identities=14% Similarity=0.093 Sum_probs=108.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 21 iG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~li~ 92 (253)
T 3qiv_A 21 IGQAYAEALAR------EGAAVVVADINAEAAEAVAKQIVADGGTAI-SVAVDVSDPESAKAMADRTLAEFG-GIDYLVN 92 (253)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCEEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 899999999975321 0 0135678 9999999999988877643 1 1799999
Q ss_pred eeeecC---------C---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 71 VMFQRL---------K---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 71 ~A~~~~---------~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
+|+... . +.+..+++|+.|+.++++++...++.. +..+||++||...|..
T Consensus 93 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~----------------- 154 (253)
T 3qiv_A 93 NAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQSSTAAWLY----------------- 154 (253)
T ss_dssp CCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECC-----------------------
T ss_pred CCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCccccCC-----------------
Confidence 998621 1 234578999999777777765432211 4578999999765521
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
...|+.+|...+ ...++.+.+++|+.|+++........ .....+. .+.|+
T Consensus 155 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~--~~~~~--- 214 (253)
T 3qiv_A 155 -----------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK----EMVDDIV--KGLPL--- 214 (253)
T ss_dssp ----------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------------------
T ss_pred -----------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH----HHHHHHh--ccCCC---
Confidence 112444443222 35689999999999998754321110 0000010 11121
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 253 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s 253 (360)
..+.+.+|+|+++++++..+. ..|++|++.+|..++
T Consensus 215 ---------~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 215 ---------SRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp --------------CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred ---------CCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence 123457789999988875432 359999999887653
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=7.2e-14 Score=127.49 Aligned_cols=196 Identities=8% Similarity=-0.072 Sum_probs=133.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ . ++|+++|+|+
T Consensus 23 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg 94 (271)
T 3tzq_B 23 IGLETSRVLAR------AGARVVLADLPETDLAGAAASVGRGAV-HHVVDLTNEVSVRALIDFTIDTFG-RLDIVDNNAA 94 (271)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECTTSCHHHHHHHHCTTCE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHhCCCeE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 79999999999 9999999999865420 0134678 8999999999988887632 1 1799999998
Q ss_pred ec-C-C---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 74 QR-L-K---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 74 ~~-~-~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
.. . . +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~-------------------- 153 (271)
T 3tzq_B 95 HSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISSATAHAAY-------------------- 153 (271)
T ss_dssp CCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSBC--------------------
T ss_pred CCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCHHHcCCC--------------------
Confidence 64 1 1 234578999999999999995432211 45799999997655310
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
.+...|+.+|...+ ...|+.+.+++|+.|++|......... ....+. ...++
T Consensus 154 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~----~~~~~~--~~~~~------- 215 (271)
T 3tzq_B 154 -----DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQP----IVDIFA--THHLA------- 215 (271)
T ss_dssp -----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHH----HHHHHH--TTSTT-------
T ss_pred -----CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHH----HHHHHH--hcCCC-------
Confidence 02345888776544 346899999999999998653212110 111111 11121
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
.-+.+.+|+|+++++++... ...|+++++.+|
T Consensus 216 -----~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 216 -----GRIGEPHEIAELVCFLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -----CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence 12456889999999887543 235999999877
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-13 Score=126.00 Aligned_cols=208 Identities=10% Similarity=-0.035 Sum_probs=135.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------------------CCCCCCceeeEeeccCChHHHHHHHccC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------------------WFPSSHVDHYITFDALDSTDTTQKLSSI- 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------------------~~~~~~v~~~v~gDl~d~~~l~~~l~~~- 61 (360)
||++++++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+
T Consensus 22 IG~a~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~ 94 (281)
T 3s55_A 22 MGRSHAVALAE------AGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCI-SAKVDVKDRAALESFVAEAE 94 (281)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------CCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEE-EEeCCCCCHHHHHHHHHHHH
Confidence 79999999999 999999999974210 00134678 8999999999988877643
Q ss_pred ---CCCccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCccc
Q 037566 62 ---SQEVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLV 129 (360)
Q Consensus 62 ---~~~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~ 129 (360)
. ++|+++|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 95 ~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~------- 165 (281)
T 3s55_A 95 DTLG-GIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-NYGRIVTVSSMLGHSAN------- 165 (281)
T ss_dssp HHHT-CCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSCC-------
T ss_pred HhcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhcCCC-------
Confidence 1 27999999985321 234578999999999999975432111 35689999997654310
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHh
Q 037566 130 GQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICR 199 (360)
Q Consensus 130 g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~ 199 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|++|......... .+..
T Consensus 166 -----------------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-------~~~~ 220 (281)
T 3s55_A 166 -----------------F-AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFG-------TMRP 220 (281)
T ss_dssp -----------------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHH-------C---
T ss_pred -----------------C-CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhc-------cccc
Confidence 0 2345888776443 346899999999999998543210000 0000
Q ss_pred hcCCCee------eeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc
Q 037566 200 HQGLPFR------YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 253 (360)
Q Consensus 200 ~~~~~~~------~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s 253 (360)
....+.. +..... ....+.+.+|+|+++++++..+. ..|++|+|.+|...+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~---~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 221 DLEKPTLKDVESVFASLHL---QYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp ----CCHHHHHHHHHHHCS---SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred cccccchhHHHHHHHhhhc---cCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 0000000 000000 11457789999999998886432 349999998887654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-14 Score=129.89 Aligned_cols=197 Identities=14% Similarity=0.056 Sum_probs=131.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEE-ecCCCCCC-----C--CCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGT-ARRPPPSW-----F--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l-~r~~~~~~-----~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
.||++++++|++ +|++|+++ +|++.... . ...++. ++.+|++|++++.++++.+ . ++|+|
T Consensus 12 giG~~la~~l~~------~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~l 83 (244)
T 1edo_A 12 GIGKAIALSLGK------AGCKVLVNYARSAKAAEEVSKQIEAYGGQAI-TFGGDVSKEADVEAMMKTAIDAWG-TIDVV 83 (244)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHHTCEEE-EEECCTTSHHHHHHHHHHHHHHSS-CCSEE
T ss_pred hHHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEE-EEeCCCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 379999999999 89999985 66532110 0 124678 8999999999988887642 1 17999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||+|+.... +.+..+++|+.|+.++++++.+.++. .+..+||++||...+...
T Consensus 84 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~~sS~~~~~~~----------------- 145 (244)
T 1edo_A 84 VNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMK-KRKGRIINIASVVGLIGN----------------- 145 (244)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCTHHHHCC-----------------
T ss_pred EECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-cCCCEEEEECChhhcCCC-----------------
Confidence 999985321 23457899999999999998764221 146799999997554210
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ +...|+.+|...+ ...+++++++||+.|+++........ ....+. ...|
T Consensus 146 -------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~~----- 205 (244)
T 1edo_A 146 -------I-GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED-----MEKKIL--GTIP----- 205 (244)
T ss_dssp -------T-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH-----HHHHHH--TSCT-----
T ss_pred -------C-CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChH-----HHHHHh--hcCC-----
Confidence 0 1334887776433 34689999999999998742221110 001110 1111
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCC---CCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDR---AKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~---~~g~~yni~~g~ 250 (360)
...+.+.+|+|+++++++..+. ..|+.|++.+|.
T Consensus 206 -------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 206 -------LGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp -------TCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred -------CCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence 1235688999999998874442 248999998774
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.55 E-value=5.6e-14 Score=127.62 Aligned_cols=198 Identities=9% Similarity=-0.024 Sum_probs=131.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|+++++++++.+ . ++|+|+
T Consensus 35 IG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~id~li 106 (266)
T 3o38_A 35 IGSTTARRALL------EGADVVISDYHERRLGETRDQLADLGLGRVE-AVVCDVTSTEAVDALITQTVEKAG-RLDVLV 106 (266)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHTTCSSCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred hHHHHHHHHHH------CCCEEEEecCCHHHHHHHHHHHHhcCCCceE-EEEeCCCCHHHHHHHHHHHHHHhC-CCcEEE
Confidence 79999999999 899999999975321 01135788 9999999999988877643 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++...+..+||++||...+.. .
T Consensus 107 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------~--- 168 (266)
T 3o38_A 107 NNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA---------------Q--- 168 (266)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC---------------C---
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC---------------C---
Confidence 99985321 23457899999999999998765432224568999988754421 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+...|+.+|...+ ...++.+.+++|+.|..+........ .....+. ...
T Consensus 169 -------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~--~~~------- 228 (266)
T 3o38_A 169 -------HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS----ELLDRLA--SDE------- 228 (266)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------CC-------
T ss_pred -------CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH----HHHHHHH--hcC-------
Confidence 12445888776544 34689999999999987642211100 0000000 001
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
....+.+.+|+|+++++++..+ ...|++++|.+|.
T Consensus 229 -----~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 229 -----AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp -----TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred -----CcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence 1234678999999999887642 2459999998774
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-13 Score=122.64 Aligned_cols=196 Identities=11% Similarity=0.046 Sum_probs=131.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~~ 77 (360)
||++++++|++ +|++|++++|++.. ..++. ++.+|++|++++.++++.+ . ++|.|+|+|+....
T Consensus 20 IG~~ia~~l~~------~G~~V~~~~r~~~~----~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~lv~~Ag~~~~ 87 (264)
T 2dtx_A 20 IGRAIAERFVD------EGSKVIDLSIHDPG----EAKYD-HIECDVTNPDQVKASIDHIFKEYG-SISVLVNNAGIESY 87 (264)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCCC----SCSSE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEecCccc----CCceE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCC
Confidence 89999999999 89999999997643 34678 9999999999988877642 1 17999999985321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.|+.++++++...++.. +..+||++||...|... +
T Consensus 88 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------------~- 141 (264)
T 2dtx_A 88 GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-RDPSIVNISSVQASIIT------------------------K- 141 (264)
T ss_dssp BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEEEEECCGGGTSCC------------------------T-
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECCchhccCC------------------------C-
Confidence 244678999999999999987654322 46799999997655310 1
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcch-----hHHHH-HHHHHHHhhcCCCeeeeCCcc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNN-----SLLTL-AVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~G~~~ 212 (360)
+...|+.+|...+ ... +.+.+++|+.|.++....... ..... .....+.+ ..|
T Consensus 142 ~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p-------- 210 (264)
T 2dtx_A 142 NASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGH--EHP-------- 210 (264)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHH--HST--------
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHh--cCC--------
Confidence 2445888776544 234 999999999987652110000 00000 00000000 011
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
...+.+.+|+|+++++++..+ ...|++|++.+|.
T Consensus 211 ----~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 211 ----MQRIGKPQEVASAVAFLASREASFITGTCLYVDGGL 246 (264)
T ss_dssp ----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ----CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 124678999999999887643 2358999997775
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-14 Score=130.21 Aligned_cols=205 Identities=10% Similarity=0.019 Sum_probs=133.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCC-C-CCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWF-P-SSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~-~-~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~ 75 (360)
||++++++|++ +|++|++++|++..... . -.. . ++.+|++|++++.++++.+ . ++|+|+|+|+..
T Consensus 18 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~-~-~~~~D~~~~~~~~~~~~~~~~~~g-~iD~lv~~Ag~~ 88 (256)
T 2d1y_A 18 IGRAIAQAFAR------EGALVALCDLRPEGKEVAEAIGG-A-FFQVDLEDERERVRFVEEAAYALG-RVDVLVNNAAIA 88 (256)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSTTHHHHHHHHTC-E-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChhHHHHHHHhhC-C-EEEeeCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCC
Confidence 79999999999 89999999997643100 0 013 6 8999999999888877643 2 279999999853
Q ss_pred CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 76 LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 76 ~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
.. +.+..+++|+.|+.++++++...++. .+..+||++||...+.. .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~-~~~g~iv~isS~~~~~~---------------~--------- 143 (256)
T 2d1y_A 89 APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK-VGGGAIVNVASVQGLFA---------------E--------- 143 (256)
T ss_dssp CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-TTCEEEEEECCGGGTSB---------------C---------
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCcEEEEEccccccCC---------------C---------
Confidence 21 23467899999999999998764331 24689999998754421 0
Q ss_pred CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 147 PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
| +...|+.+|...+ ...++.+.+++|+.|.++.. ... +. .... ........... ..
T Consensus 144 ~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~----~~~--~~--~~~~--~~~~~~~~~~~---~~ 209 (256)
T 2d1y_A 144 Q-ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV----LEA--IA--LSPD--PERTRRDWEDL---HA 209 (256)
T ss_dssp T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH----HHH--HC------------CHHHHTT---ST
T ss_pred C-CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh----hhc--cc--cccC--CHHHHHHHHhc---CC
Confidence 1 2345888776544 34589999999998876421 000 00 0000 00000000000 02
Q ss_pred cccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccH
Q 037566 217 FCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTW 254 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~ 254 (360)
...+.+.+|+|+++++++..+ ...|++|++.+|...++
T Consensus 210 ~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 210 LRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence 235788999999999887643 23589999988876654
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.8e-14 Score=128.81 Aligned_cols=200 Identities=8% Similarity=-0.033 Sum_probs=133.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
.||++++++|++ +|++|++++|++... .. ...... ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 22 gIG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~iD~lv~ 93 (265)
T 1qsg_A 22 SIAYGIAQAMHR------EGAELAFTYQNDKLKGRVEEFAAQLGSDI-VLQCDVAEDASIDTMFAELGKVWP-KFDGFVH 93 (265)
T ss_dssp SHHHHHHHHHHH------TTCEEEEEESSTTTHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHHHHHTTCS-SEEEEEE
T ss_pred CHHHHHHHHHHH------CCCEEEEEcCcHHHHHHHHHHHHhcCCcE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 489999999999 899999999976210 00 012346 8999999999988877643 2 2899999
Q ss_pred eeeecC-----------C---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 71 VMFQRL-----------K---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 71 ~A~~~~-----------~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
+|+... . +.+..+++|+.|+.++++++...++ .-.+||++||...|...
T Consensus 94 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~~-------------- 156 (265)
T 1qsg_A 94 SIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN---PGSALLTLSYLGAERAI-------------- 156 (265)
T ss_dssp CCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECGGGTSBC--------------
T ss_pred CCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc---cCCEEEEEcchhhccCC--------------
Confidence 998532 1 2345789999999999999987632 12589999987554210
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
+ +...|+.+|...+ ...++.+.++||+.|++|.......... ....+.+ +.|+
T Consensus 157 ----------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~--~~p~- 219 (265)
T 1qsg_A 157 ----------P-NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRK---MLAHCEA--VTPI- 219 (265)
T ss_dssp ----------T-TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHH---HHHHHHH--HSTT-
T ss_pred ----------C-CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHH---HHHHHHh--cCCC-
Confidence 0 1335888776544 3468999999999999975322111110 1111111 1221
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
..+.+.+|+|+++++++..+ ...|++|++.+|..++
T Consensus 220 -----------~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 220 -----------RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp -----------SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred -----------CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence 12457899999999887532 2348999998886543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.54 E-value=9.9e-14 Score=125.30 Aligned_cols=206 Identities=10% Similarity=0.013 Sum_probs=131.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
||++++++|++ +|++|++++|++... . ....++. ++.+|++|++++.++++.+ . ++|+|||+|
T Consensus 16 iG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~lv~~A 87 (255)
T 2q2v_A 16 IGLGIAQVLAR------AGANIVLNGFGDPAPALAEIARHGVKAV-HHPADLSDVAQIEALFALAEREFG-GVDILVNNA 87 (255)
T ss_dssp HHHHHHHHHHH------TTCEEEEECSSCCHHHHHHHHTTSCCEE-EECCCTTSHHHHHHHHHHHHHHHS-SCSEEEECC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCchHHHHHHHHhcCCceE-EEeCCCCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 79999999999 899999999876421 0 0134678 8999999999998887732 1 179999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +.+..+++|+.|+.++.+++...++. .+..+||++||...|...
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~--------------------- 145 (255)
T 2q2v_A 88 GIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA-RNWGRIINIASVHGLVGS--------------------- 145 (255)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEEEEECCGGGTSCC---------------------
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCcEEEEEcCchhccCC---------------------
Confidence 85321 23457899999888888777543221 156899999997655310
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHH--HHHHHHhhcCCCeeeeCCc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLA--VYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~G~~ 211 (360)
+ +...|+.+|...+ ...++.++++||+.|++|............. ......+......
T Consensus 146 ---~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 215 (255)
T 2q2v_A 146 ---T-GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQ------ 215 (255)
T ss_dssp ---T-TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTC------
T ss_pred ---C-CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccC------
Confidence 1 1345887775443 3468999999999999864211000000000 0000000000000
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
....+.+++|+|+++++++..+. ..|++|++.+|..
T Consensus 216 ----p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 216 ----PSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp ----TTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred ----CCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence 12356789999999998875432 3489999987754
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3e-14 Score=128.89 Aligned_cols=200 Identities=11% Similarity=-0.017 Sum_probs=132.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEec-CCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTAR-RPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r-~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++| ++... .. ...++. ++.+|++|++++.++++.+ .. +|+||
T Consensus 19 iG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~-id~li 90 (261)
T 1gee_A 19 LGKSMAIRFAT------EKAKVVVNYRSKEDEANSVLEEIKKVGGEAI-AVKGDVTVESDVINLVQSAIKEFGK-LDVMI 90 (261)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCEEE-EEECCTTSHHHHHHHHHHHHHHHSC-CCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCChHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHHcCC-CCEEE
Confidence 79999999999 8999999999 43211 00 124578 8999999999988877632 11 79999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++......+||++||...+..
T Consensus 91 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~------------------- 151 (261)
T 1gee_A 91 NNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP------------------- 151 (261)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-------------------
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-------------------
Confidence 99985321 23457899999999999988764321111569999998654320
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
. .+...|+.+|...+ ...+++++++||+.|+++........ . .....+. ...|
T Consensus 152 ----~--~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~-~~~~~~~--~~~~------ 214 (261)
T 1gee_A 152 ----W--PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD--P-EQRADVE--SMIP------ 214 (261)
T ss_dssp ----C--TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS--H-HHHHHHH--TTCT------
T ss_pred ----C--CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccC--h-hHHHHHH--hcCC------
Confidence 0 12456888885433 34589999999999999743111000 0 0011111 1111
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
...+.+.+|+|+++++++..+ ...|++|++.+|..
T Consensus 215 ------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 215 ------MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp ------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ------CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence 124578999999999887532 23589999988764
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=4.7e-14 Score=127.96 Aligned_cols=202 Identities=9% Similarity=0.010 Sum_probs=134.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
.||++++++|++ +|++|++++|++... .. ....+. ++.+|++|+++++++++.+ . ++|+|+|
T Consensus 21 gIG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~iD~lv~ 92 (261)
T 2wyu_A 21 SLGFAIAAKLKE------AGAEVALSYQAERLRPEAEKLAEALGGAL-LFRADVTQDEELDALFAGVKEAFG-GLDYLVH 92 (261)
T ss_dssp SHHHHHHHHHHH------HTCEEEEEESCGGGHHHHHHHHHHTTCCE-EEECCTTCHHHHHHHHHHHHHHHS-SEEEEEE
T ss_pred cHHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHHHhcCCcE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 489999999999 899999999975310 00 012477 8999999999988877643 1 2799999
Q ss_pred eeeecCC-------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 71 VMFQRLK-------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 71 ~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
+|+.... +.+..+++|+.|+.++++++...++ .-.+||++||...+...
T Consensus 93 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~~--------------- 154 (261)
T 2wyu_A 93 AIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLR---EGGGIVTLTYYASEKVV--------------- 154 (261)
T ss_dssp CCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---EEEEEEEEECGGGTSBC---------------
T ss_pred CCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhc---cCCEEEEEecccccCCC---------------
Confidence 9985321 2345789999999999999987532 12589999986544210
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|+++.......... ....+.+ ..|+
T Consensus 155 ---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~--~~p~-- 217 (261)
T 2wyu_A 155 ---------P-KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTK---MYDRVAQ--TAPL-- 217 (261)
T ss_dssp ---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHH---HHHHHHH--HSTT--
T ss_pred ---------C-CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHH---HHHHHHh--cCCC--
Confidence 1 1335888776544 3458999999999999975322111110 1111111 1221
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccHH
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWK 255 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~~ 255 (360)
..+.+++|+|+++++++..+ ...|++|++.+|...+..
T Consensus 218 ----------~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~ 257 (261)
T 2wyu_A 218 ----------RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMGM 257 (261)
T ss_dssp ----------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC-
T ss_pred ----------CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccCC
Confidence 12456889999999887532 234899999888765533
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.4e-14 Score=132.49 Aligned_cols=201 Identities=8% Similarity=-0.003 Sum_probs=130.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC------------CCCCCceeeEeeccCChHHHHHHHccC----CCCc
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW------------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEV 65 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~------------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v 65 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ . ++
T Consensus 30 IG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~i 101 (303)
T 1yxm_A 30 IGKAIVKELLE------LGSNVVIASRKLERLKSAADELQANLPPTKQARVI-PIQCNIRNEEEVNNLVKSTLDTFG-KI 101 (303)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEE-EEecCCCCHHHHHHHHHHHHHHcC-CC
Confidence 79999999999 8999999999743110 0135688 9999999999988887653 1 17
Q ss_pred cEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 66 THLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 66 ~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
|+|||+|+.... +.+..+++|+.|+.++++++...+. ..+..+||++||...++.
T Consensus 102 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~--------------- 165 (303)
T 1yxm_A 102 NFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWM-KEHGGSIVNIIVPTKAGF--------------- 165 (303)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH-HHHCEEEEEECCCCTTCC---------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HhcCCeEEEEEeecccCC---------------
Confidence 999999984221 2345789999999999999865210 013478999988762221
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHH--------h--cCCCCcEEEEcCCCeeecCC-CCcchhHHHHHHHHHHHhhcCCCe
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAA--------S--YSPAVTYSVHRSSIIIGASS-RSLNNSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~--------e--~~~~~~~~ilRp~~vyGp~~-~~~~~~~~~~~~~~~~~~~~~~~~ 205 (360)
| ....|+.+|... + ...|++++++||+.|+|+.. ........ .....+. ...
T Consensus 166 ----------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~--~~~-- 228 (303)
T 1yxm_A 166 ----------P-LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ--SFFEGSF--QKI-- 228 (303)
T ss_dssp ----------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGG--GGGTTGG--GGS--
T ss_pred ----------C-cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccch--HHHHHHH--hcC--
Confidence 0 123466555432 2 34589999999999999842 11110000 0000000 000
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 253 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s 253 (360)
....+.+++|+|+++++++..+. ..|+.|++.+|..++
T Consensus 229 ----------p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 229 ----------PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp ----------TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred ----------cccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence 11236778999999998875432 358999998887654
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=6.2e-15 Score=133.05 Aligned_cols=202 Identities=16% Similarity=0.099 Sum_probs=133.3
Q ss_pred chHHHHHHHhcCCCCCCCCcE-EEEEecCCCCC-------CCCCCCceeeEeeccCCh-HHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWK-VYGTARRPPPS-------WFPSSHVDHYITFDALDS-TDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~-V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~-~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++ |++++|++... .....+++ ++.+|++|+ +++.++++.+ . ++|+|
T Consensus 17 IG~~~a~~l~~------~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~g-~id~l 88 (254)
T 1sby_A 17 IGLDTSRELVK------RNLKNFVILDRVENPTALAELKAINPKVNIT-FHTYDVTVPVAESKKLLKKIFDQLK-TVDIL 88 (254)
T ss_dssp HHHHHHHHHHH------TCCSEEEEEESSCCHHHHHHHHHHCTTSEEE-EEECCTTSCHHHHHHHHHHHHHHHS-CCCEE
T ss_pred HHHHHHHHHHH------CCCcEEEEEecCchHHHHHHHHHhCCCceEE-EEEEecCCChHHHHHHHHHHHHhcC-CCCEE
Confidence 89999999999 8996 99999875311 00124678 899999998 8887776632 1 17999
Q ss_pred EEeeeec-CCChhHhhhhhHHHHHHHHHHHHhhccCCC--CccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 69 FWVMFQR-LKSEEINISNNSTMFKNVMSVVVDSNKGRS--RLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 69 ~h~A~~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~~~--~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
||+|+.. ..+.+..+++|+.|+.++++++...++... .-.+||++||...|...
T Consensus 89 v~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------- 145 (254)
T 1sby_A 89 INGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI----------------------- 145 (254)
T ss_dssp EECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------------------
T ss_pred EECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----------------------
Confidence 9999963 346778999999999999999976532110 13589999998665310
Q ss_pred CCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 146 LPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
+ +...|+.+|...+ ...++.+++++|+.|.++................... ..
T Consensus 146 -~-~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~------------- 208 (254)
T 1sby_A 146 -H-QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL--LS------------- 208 (254)
T ss_dssp -T-TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH--TT-------------
T ss_pred -C-CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH--hc-------------
Confidence 1 1345888876554 1258999999999999873211100000000000000 01
Q ss_pred ccccccCHHHHHHHHHHHHcCCCCCCCceeccCCC--cccH
Q 037566 216 HFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGD--VFTW 254 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~--~~s~ 254 (360)
..+.+++|+|++++.++. ....|++|++.+|. +++|
T Consensus 209 --~~~~~~~dvA~~i~~~~~-~~~~G~~~~v~gG~~~~~~~ 246 (254)
T 1sby_A 209 --HPTQTSEQCGQNFVKAIE-ANKNGAIWKLDLGTLEAIEW 246 (254)
T ss_dssp --SCCEEHHHHHHHHHHHHH-HCCTTCEEEEETTEEEECCC
T ss_pred --CCCCCHHHHHHHHHHHHH-cCCCCCEEEEeCCceeEecc
Confidence 112368899999988875 34568999998883 4444
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.4e-14 Score=129.86 Aligned_cols=203 Identities=12% Similarity=-0.014 Sum_probs=133.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+ .. +|+|||+|+
T Consensus 24 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~d~~~v~~~~~~~~~~~g~-iD~lv~~Ag 95 (263)
T 3ak4_A 24 IGAAIARALDK------AGATVAIADLDVMAAQAVVAGLENGGF-AVEVDVTKRASVDAAMQKAIDALGG-FDLLCANAG 95 (263)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHTCTTCCE-EEECCTTCHHHHHHHHHHHHHHHTC-CCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHhcCCe-EEEEeCCCHHHHHHHHHHHHHHcCC-CCEEEECCC
Confidence 79999999999 899999999975321 00122678 8999999999988887632 11 799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++++++...++......+||++||...+.. .
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~- 153 (263)
T 3ak4_A 96 VSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG---------------------A- 153 (263)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC---------------------C-
T ss_pred cCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC---------------------C-
Confidence 5321 23457899999999999998764321211579999998754421 0
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhH-HH-----HHHHHHHHhhcCCCeeee
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSL-LT-----LAVYATICRHQGLPFRYL 208 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~ 208 (360)
| +...|+.+|...+ ...|++++++||+.|+++......... .. -.....+. ...|
T Consensus 154 --~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p---- 224 (263)
T 3ak4_A 154 --P-LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYV--SLTP---- 224 (263)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHH--HTCT----
T ss_pred --C-CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHH--hcCC----
Confidence 1 1345888776443 345899999999999886321100000 00 00000010 1111
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
...+.+.+|+|+++++++..+ ...|++|+|.+|..
T Consensus 225 --------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 225 --------LGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp --------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred --------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence 124678999999999887643 23589999988754
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=7.8e-14 Score=126.37 Aligned_cols=200 Identities=9% Similarity=0.010 Sum_probs=134.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEE-ecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGT-ARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l-~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|+++ +|+.... .....++. ++.+|++|+++++++++.+ . ++|+|+
T Consensus 16 IG~aia~~l~~------~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv 87 (258)
T 3oid_A 16 VGKAAAIRLAE------NGYNIVINYARSKKAALETAEEIEKLGVKVL-VVKANVGQPAKIKEMFQQIDETFG-RLDVFV 87 (258)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 99999887 6653211 01135688 9999999999988887654 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 88 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~------------------ 148 (258)
T 3oid_A 88 NNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSISSLGSIRYL------------------ 148 (258)
T ss_dssp ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEEEEGGGTSBC------------------
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhCCCC------------------
Confidence 99984221 234578999999999999986543312 45799999997654310
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+...|+.+|...+ ...++.+.+++|+.|..+.......... ....+.+ ..|+
T Consensus 149 -------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p~----- 211 (258)
T 3oid_A 149 -------ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNRED---LLEDARQ--NTPA----- 211 (258)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHH---HHHHHHH--HCTT-----
T ss_pred -------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHH---HHHHHHh--cCCC-----
Confidence 12445888876544 3458999999999998874322111111 1111111 1221
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 252 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~ 252 (360)
..+.+.+|+|+++++++..+. ..|++++|.+|...
T Consensus 212 -------~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 212 -------GRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp -------SSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred -------CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccC
Confidence 235678999999998876432 35999999888654
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=4.3e-14 Score=128.04 Aligned_cols=200 Identities=11% Similarity=-0.006 Sum_probs=134.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ . ++|+|||+|+
T Consensus 24 iG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~li~~Ag 95 (265)
T 2o23_A 24 LGLATAERLVG------QGASAVLLDLPNSGGEAQAKKLGNNCV-FAPADVTSEKDVQTALALAKGKFG-RVDVAVNCAG 95 (265)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECTTSSHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcHhHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHHHHHCC-CCCEEEECCc
Confidence 79999999999 8999999999864320 0024688 9999999999998887732 1 1799999998
Q ss_pred ecCC---------------ChhHhhhhhHHHHHHHHHHHHhhccCC-----CCccEEEEeccCccccccccCCcccCCcC
Q 037566 74 QRLK---------------SEEINISNNSTMFKNVMSVVVDSNKGR-----SRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 74 ~~~~---------------~~~~~~~vNv~gt~nll~a~~~~~~~~-----~~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
.... +.+..+++|+.|+.++++++...++.. .+..+||++||...|...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------- 164 (265)
T 2o23_A 96 IAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ----------- 164 (265)
T ss_dssp CCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-----------
T ss_pred cCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC-----------
Confidence 5311 234578999999999999998754311 046789999997665310
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGL 203 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~ 203 (360)
+ +...|+.+|...+ ...++.+.+++|+.|.++........ ....+. ...
T Consensus 165 -------------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~ 223 (265)
T 2o23_A 165 -------------V-GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-----VCNFLA--SQV 223 (265)
T ss_dssp -------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CHHH--HTC
T ss_pred -------------C-CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH-----HHHHHH--HcC
Confidence 0 2345888776433 34589999999999988643211000 000011 111
Q ss_pred CeeeeCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcc
Q 037566 204 PFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVF 252 (360)
Q Consensus 204 ~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~ 252 (360)
|+ . ..+.+.+|+|+++++++..+...|+.+++.+|..+
T Consensus 224 ~~--~---------~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 224 PF--P---------SRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp SS--S---------CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred CC--c---------CCCCCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence 11 1 12567899999999888766567999999877644
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-14 Score=131.11 Aligned_cols=213 Identities=9% Similarity=-0.033 Sum_probs=132.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC-CCCccEEEEeeeecC--CC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI-SQEVTHLFWVMFQRL--KS 78 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~-~~~v~~V~h~A~~~~--~~ 78 (360)
||++++++|++ +|++|++++|++.... . .+.+|++|.++++++++.+ .. +|+|+|+|+... .+
T Consensus 13 IG~~~a~~l~~------~G~~V~~~~r~~~~~~------~-~~~~Dl~~~~~v~~~~~~~~~~-id~lv~~Ag~~~~~~~ 78 (257)
T 1fjh_A 13 IGAATRKVLEA------AGHQIVGIDIRDAEVI------A-DLSTAEGRKQAIADVLAKCSKG-MDGLVLCAGLGPQTKV 78 (257)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSSSSEE------C-CTTSHHHHHHHHHHHHTTCTTC-CSEEEECCCCCTTCSS
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCchhhc------c-ccccCCCCHHHHHHHHHHhCCC-CCEEEECCCCCCCccc
Confidence 89999999999 8999999999764310 1 2678999999999999876 43 899999999643 45
Q ss_pred hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC-----------CCCC
Q 037566 79 EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS-----------LRLP 147 (360)
Q Consensus 79 ~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~-----------p~~p 147 (360)
.+..+++|+.|+.++++++...++.. +..|||++||..+|..+.. .+. ...+..+.+ ...
T Consensus 79 ~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~- 149 (257)
T 1fjh_A 79 LGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSVASAHLAFD----KNP---LALALEAGEEAKARAIVEHAGEQ- 149 (257)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGSSCGG----GCT---THHHHHHTCHHHHHHHHHTCCTT-
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEECChhhhccccc----cch---hhhhhcccchhhhhhhhhcccCC-
Confidence 77899999999999999997543212 4679999999888742100 000 000000000 111
Q ss_pred CCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 148 FPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
.+...|+.+|...+ ...++.+++++|+.|.++........ ...... .. .+.. ..
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~---~~-~~~~--------~~ 213 (257)
T 1fjh_A 150 GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD----PRYGES---IA-KFVP--------PM 213 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------------CCC--------ST
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc----hhHHHH---HH-hccc--------cc
Confidence 12456888887554 23689999999999988643221000 000000 00 0000 11
Q ss_pred ccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 218 CDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
..+.+.+|+|+++++++..+ ...|+.|++.+|...+
T Consensus 214 ~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~ 251 (257)
T 1fjh_A 214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251 (257)
T ss_dssp TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence 23567899999999887643 3458999998775443
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.53 E-value=8.6e-14 Score=128.53 Aligned_cols=199 Identities=13% Similarity=0.083 Sum_probs=133.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 53 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv 124 (293)
T 3rih_A 53 IGRGIATVFAR------AGANVAVAARSPRELSSVTAELGELGAGNVI-GVRLDVSDPGSCADAARTVVDAFG-ALDVVC 124 (293)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSGGGGHHHHHHHTTSSSSCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhhCCCcEE-EEEEeCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 89999999999 999999999976431 00114688 9999999999888776643 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 125 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iV~isS~~~~~~~------------------ 185 (293)
T 3rih_A 125 ANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRVILTSSITGPVTG------------------ 185 (293)
T ss_dssp ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEEEEECCSBTTTBB------------------
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEeChhhccCC------------------
Confidence 99985321 234578999999999999985322111 45799999987532100
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+ +...|+.+|...+ ...|+.+.+++|+.|++|........ ....+. ...|+ |
T Consensus 186 -----~~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-----~~~~~~--~~~p~---~- 248 (293)
T 3rih_A 186 -----YP-GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEE-----YISGMA--RSIPM---G- 248 (293)
T ss_dssp -----CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHH-----HHHHHH--TTSTT---S-
T ss_pred -----CC-CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHH-----HHHHHH--hcCCC---C-
Confidence 01 2345888776443 34689999999999999743211110 111111 12222 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
-+...+|+|+++++++... ...|++++|.+|..+
T Consensus 249 --------r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 249 --------MLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp --------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred --------CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 2345788999998887532 245999999888654
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=5.5e-14 Score=126.23 Aligned_cols=198 Identities=15% Similarity=0.125 Sum_probs=135.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|+++++++++.+ . ++|+|+|
T Consensus 17 IG~~~a~~l~~------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~ 88 (247)
T 3lyl_A 17 IGFEVAHALAS------KGATVVGTATSQASAEKFENSMKEKGFKAR-GLVLNISDIESIQNFFAEIKAENL-AIDILVN 88 (247)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHTTC-CCSEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 899999999975321 0 0135688 9999999999988877643 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 89 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------- 148 (247)
T 3lyl_A 89 NAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-RWGRIISIGSVVGSAGN------------------- 148 (247)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCC-------------------
T ss_pred CCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhccCC-------------------
Confidence 9985321 234578999999999999986532111 34689999987654310
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
| +...|+.+|...+ ...++.+.+++|+.|..+......... ...+. .+.|
T Consensus 149 -----~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----~~~~~--~~~~------- 208 (247)
T 3lyl_A 149 -----P-GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQ-----KSFIA--TKIP------- 208 (247)
T ss_dssp -----T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHH-----HHHHH--TTST-------
T ss_pred -----C-CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHH-----HHHHh--hcCC-------
Confidence 1 1345888886433 346899999999999887543322111 01111 1111
Q ss_pred ccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
...+.+.+|+|+++++++... ...|++|++.+|..+
T Consensus 209 -----~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 209 -----SGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp -----TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred -----CCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence 134678999999999887543 235999999887654
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.3e-14 Score=128.24 Aligned_cols=196 Identities=12% Similarity=0.076 Sum_probs=127.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEE-ecCCCCCC-------CCCCCceee-EeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGT-ARRPPPSW-------FPSSHVDHY-ITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l-~r~~~~~~-------~~~~~v~~~-v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|+++ +|++.... ....++. + +.+|++|.+++.++++.+ . ++|+|
T Consensus 13 iG~~~a~~l~~------~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~l 84 (245)
T 2ph3_A 13 IGRAIALRLAE------DGFALAIHYGQNREKAEEVAEEARRRGSPLV-AVLGANLLEAEAATALVHQAAEVLG-GLDTL 84 (245)
T ss_dssp HHHHHHHHHHT------TTCEEEEEESSCHHHHHHHHHHHHHTTCSCE-EEEECCTTSHHHHHHHHHHHHHHHT-CCCEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHhcCCceE-EEEeccCCCHHHHHHHHHHHHHhcC-CCCEE
Confidence 79999999999 89999998 66532210 0123566 6 999999999988876532 1 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||+|+.... +.+..+++|+.|+.++++++.+.++. .+.+|||++||...+...
T Consensus 85 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-~~~~~iv~~sS~~~~~~~----------------- 146 (245)
T 2ph3_A 85 VNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMK-ARFGRIVNITSVVGILGN----------------- 146 (245)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCTHHHHCC-----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHh-cCCCEEEEEeChhhccCC-----------------
Confidence 999985321 23467899999966666665432210 157899999987544210
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ +...|+.+|...+ ...+++++++||+.++++........ ....+. .+.+
T Consensus 147 -------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~~----- 206 (245)
T 2ph3_A 147 -------P-GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQE-----VKEAYL--KQIP----- 206 (245)
T ss_dssp -------S-SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH-----HHHHHH--HTCT-----
T ss_pred -------C-CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHH-----HHHHHH--hcCC-----
Confidence 0 1345888776433 23589999999999998743221111 001111 1112
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
...+.+++|+|+++++++..+. ..|+.|++.+|.
T Consensus 207 -------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 207 -------AGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp -------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred -------CCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 1246789999999998875432 348999998774
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=5.8e-14 Score=127.47 Aligned_cols=199 Identities=13% Similarity=0.040 Sum_probs=134.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+++
T Consensus 22 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv 93 (262)
T 3pk0_A 22 IGRGIATVFAR------AGANVAVAGRSTADIDACVADLDQLGSGKVI-GVQTDVSDRAQCDALAGRAVEEFG-GIDVVC 93 (262)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHTTSSSCEE-EEECCTTSHHHHHHHHHHHHHHHS-CCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhhCCCcEE-EEEcCCCCHHHHHHHHHHHHHHhC-CCCEEE
Confidence 79999999999 999999999975321 01114688 9999999999988877632 1 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+.. +
T Consensus 94 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~----------------~-- 154 (262)
T 3pk0_A 94 ANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-GSGRVVLTSSITGPIT----------------G-- 154 (262)
T ss_dssp ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-SSCEEEEECCSBTTTB----------------C--
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEechhhccC----------------C--
Confidence 99985321 234568999999999999987653311 4578999998653210 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.| +...|+.+|...+ ...|+.+.+++|+.|+++........ ....+. ...|+
T Consensus 155 -----~~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-----~~~~~~--~~~p~----- 216 (262)
T 3pk0_A 155 -----YP-GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEE-----YIASMA--RSIPA----- 216 (262)
T ss_dssp -----CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHH-----HHHHHH--TTSTT-----
T ss_pred -----CC-CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHH-----HHHHHH--hcCCC-----
Confidence 01 2345888776544 34689999999999998743221111 111111 12221
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
.-+.+.+|+|+++++++..+ ...|++++|.+|..+
T Consensus 217 -------~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 217 -------GALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp -------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred -------CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence 12456889999999887543 245999999888654
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2e-14 Score=129.44 Aligned_cols=200 Identities=11% Similarity=0.015 Sum_probs=131.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--C--CCCCc-eeeEeeccCChHHHHHHHccC---CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--F--PSSHV-DHYITFDALDSTDTTQKLSSI---SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--~--~~~~v-~~~v~gDl~d~~~l~~~l~~~---~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|++.... . ...++ . ++.+|++|++++.++++.+ . ++|+|||+|+
T Consensus 23 iG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~-~id~li~~Ag 94 (254)
T 2wsb_A 23 IGLEICRAFAA------SGARLILIDREAAALDRAAQELGAAVAA-RIVADVTDAEAMTAAAAEAEAVA-PVSILVNSAG 94 (254)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHGGGEEE-EEECCTTCHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhccccee-EEEEecCCHHHHHHHHHHHHhhC-CCcEEEECCc
Confidence 79999999999 8999999999753210 0 01245 7 8999999999988877542 2 2799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++++++...++. .+.++||++||...|... |
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~---------------------~ 152 (254)
T 2wsb_A 95 IARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVA-RGAGAIVNLGSMSGTIVN---------------------R 152 (254)
T ss_dssp CCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGTSCC---------------------S
T ss_pred cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCcEEEEEecchhccCC---------------------C
Confidence 5321 23457889999988888877543211 146899999998665310 0
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
..|...|+.+|...+ ...+++++++||+.|+++......... .....+. ...|
T Consensus 153 --~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~--~~~~---------- 215 (254)
T 2wsb_A 153 --PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERP---ELFETWL--DMTP---------- 215 (254)
T ss_dssp --SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCH---HHHHHHH--HTST----------
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccCh---HHHHHHH--hcCC----------
Confidence 012356888876554 235899999999999987421100000 0111111 1112
Q ss_pred cccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
...+.+++|+|+++++++..+ ...|++|++.+|.
T Consensus 216 --~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 216 --MGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --CCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence 124678999999999887542 2358999997764
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.53 E-value=7.4e-14 Score=128.15 Aligned_cols=208 Identities=10% Similarity=0.027 Sum_probs=131.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|
T Consensus 37 IG~~ia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~l 108 (281)
T 3v2h_A 37 IGLAIARTLAK------AGANIVLNGFGAPDEIRTVTDEVAGLSSGTVL-HHPADMTKPSEIADMMAMVADRFG-GADIL 108 (281)
T ss_dssp HHHHHHHHHHH------TTCEEEEECCCCHHHHHHHHHHHHTTCSSCEE-EECCCTTCHHHHHHHHHHHHHHTS-SCSEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCChHHHHHHHHHHhhccCCcEE-EEeCCCCCHHHHHHHHHHHHHHCC-CCCEE
Confidence 79999999999 999999999853210 01135688 9999999999988877633 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 109 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~----------------- 170 (281)
T 3v2h_A 109 VNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIASAHGLVAS----------------- 170 (281)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC-----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCcccccCC-----------------
Confidence 999985321 234578999999999999985432211 45789999987654210
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ ....|+.+|...+ ...|+.+.+++|+.|++|.......... ....+.. .........
T Consensus 171 -------~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~---~~~~~~~-~~~~~~~~~ 238 (281)
T 3v2h_A 171 -------P-FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQA---RTRGITE-EQVINEVML 238 (281)
T ss_dssp -------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------------------------------
T ss_pred -------C-CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhh---hhcCCCH-HHHHHHHHH
Confidence 1 1345888776443 3468999999999999875322111000 0000000 000000011
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
.. .....+.+++|+|+++++++..+. ..|++++|.+|-
T Consensus 239 ~~---~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 239 KG---QPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp -C---CTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred hc---CCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 11 133568899999999998876432 359999998774
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=3.1e-14 Score=129.09 Aligned_cols=200 Identities=11% Similarity=0.053 Sum_probs=133.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .. ...++. ++.+|++|++++.++++.+ . ++|+||
T Consensus 19 IG~~~a~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~id~lv 90 (264)
T 3i4f_A 19 LGKQVTEKLLA------KGYSVTVTYHSDTTAMETMKETYKDVEERLQ-FVQADVTKKEDLHKIVEEAMSHFG-KIDFLI 90 (264)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHTGGGGGGEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred hHHHHHHHHHH------CCCEEEEEcCCChHHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHhC-CCCEEE
Confidence 79999999999 899999998875321 00 124688 9999999999988887643 1 179999
Q ss_pred Eeeee--cCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 70 WVMFQ--RLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 70 h~A~~--~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+|+. ... +.+..+++|+.|+.++++++...++.. +..+||++||.++++.. .
T Consensus 91 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~-------------~-- 154 (264)
T 3i4f_A 91 NNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQGADSAP-------------G-- 154 (264)
T ss_dssp CCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTTGGGCC-------------C--
T ss_pred ECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEEeechhcccC-------------C--
Confidence 99983 111 234578999999999999984322111 46799999887554311 0
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
. .+...|+.+|...+ ...++.+.+++|+.|+++......... . +......
T Consensus 155 -------~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--------~-~~~~~~~--- 214 (264)
T 3i4f_A 155 -------W-IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEA--------R-QLKEHNT--- 214 (264)
T ss_dssp -------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHH--------H-HC--------
T ss_pred -------C-CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHH--------H-HHHhhcC---
Confidence 0 12446888776443 346899999999999998543321110 0 0000001
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 252 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~ 252 (360)
....+.+.+|+|+++++++..+. ..|++|++.+|-..
T Consensus 215 -------p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~ 253 (264)
T 3i4f_A 215 -------PIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDV 253 (264)
T ss_dssp ----------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred -------CCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence 11235678999999998876432 35999999888654
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.7e-14 Score=130.64 Aligned_cols=201 Identities=8% Similarity=0.014 Sum_probs=135.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|+++++++++.+ . ++|+++|
T Consensus 24 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~id~lv~ 95 (256)
T 3gaf_A 24 IGRAIAGTFAK------AGASVVVTDLKSEGAEAVAAAIRQAGGKAI-GLECNVTDEQHREAVIKAALDQFG-KITVLVN 95 (256)
T ss_dssp HHHHHHHHHHH------HTCEEEEEESSHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 899999999975321 0 0135688 9999999999988877633 2 2799999
Q ss_pred eeeecCC--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 71 VMFQRLK--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 71 ~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 96 nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~-------------------- 154 (256)
T 3gaf_A 96 NAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISSMAGENTN-------------------- 154 (256)
T ss_dssp CCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTCCC--------------------
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHHcCCC--------------------
Confidence 9985321 234578999999999999986543212 35699999987654210
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
+ +...|+.+|...+ ...++.+..++|+.|..+........ .....+. ...|
T Consensus 155 ----~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----~~~~~~~--~~~p-------- 215 (256)
T 3gaf_A 155 ----V-RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTP----EIERAML--KHTP-------- 215 (256)
T ss_dssp ----T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCH----HHHHHHH--TTCT--------
T ss_pred ----C-CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCH----HHHHHHH--hcCC--------
Confidence 1 1345888776544 34689999999999987632111000 0011111 1122
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccH
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTW 254 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~ 254 (360)
...+.+.+|+|+++++++... ...|++++|.+|...++
T Consensus 216 ----~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 216 ----LGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp ----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred ----CCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence 124567899999999887532 23599999999887664
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=4.3e-14 Score=128.07 Aligned_cols=204 Identities=11% Similarity=0.041 Sum_probs=133.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccC-----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSI-----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~-----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|++.... ....++. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 21 iG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~g-~id~lv 92 (260)
T 2ae2_A 21 IGYGIVEELAS------LGASVYTCSRNQKELNDCLTQWRSKGFKVE-ASVCDLSSRSERQELMNTVANHFHG-KLNILV 92 (260)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHHHHHHTTT-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHcCC-CCCEEE
Confidence 79999999999 8999999999753210 0124678 8999999999988877531 2 289999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++. .+..+||++||...+...
T Consensus 93 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~------------------ 153 (260)
T 2ae2_A 93 NNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA-SERGNVVFISSVSGALAV------------------ 153 (260)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TSSEEEEEECCGGGTSCC------------------
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCcEEEEEcchhhccCC------------------
Confidence 99985321 23457899999999999998653221 146899999997654210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
| +...|+.+|...+ ...++.+.+++|+.|.++.................+. ...|
T Consensus 154 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~------ 218 (260)
T 2ae2_A 154 ------P-YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLI--DRCA------ 218 (260)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHH--HTST------
T ss_pred ------C-CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHH--hcCC------
Confidence 1 1345888876554 2358999999999998763110000000000000110 1111
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
...+.+.+|+|+++++++..+ ...|+++++.+|...+
T Consensus 219 ------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 219 ------LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMAN 257 (260)
T ss_dssp ------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred ------CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcccc
Confidence 124678999999998887533 2358999998886543
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=3.3e-14 Score=129.66 Aligned_cols=196 Identities=12% Similarity=0.050 Sum_probs=133.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|+++++++++.+ . ++|+|+
T Consensus 40 IG~aia~~la~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~v~~~~~~~~~~~g-~id~lv 111 (269)
T 4dmm_A 40 IGRAIALELAA------AGAKVAVNYASSAGAADEVVAAIAAAGGEAF-AVKADVSQESEVEALFAAVIERWG-RLDVLV 111 (269)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCChHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 999999998854221 0 0134678 8999999999988877643 1 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 112 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 172 (269)
T 4dmm_A 112 NNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-RSGRIINIASVVGEMGN------------------ 172 (269)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCHHHHHCC------------------
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhcCCC------------------
Confidence 99985321 234578999999999999986532211 34689999987654210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ ....|+.+|...+ ...|+.+.+++|+.|.++.... .. . ..+ ....|+
T Consensus 173 ------~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~----~-~~~--~~~~p~----- 230 (269)
T 4dmm_A 173 ------P-GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE---LA----A-EKL--LEVIPL----- 230 (269)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH---HH----H-HHH--GGGCTT-----
T ss_pred ------C-CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc---cc----H-HHH--HhcCCC-----
Confidence 0 1345888886433 3468999999999998764321 10 0 011 011221
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCCC---CCCceeccCCCccc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDRA---KNQAFNCTNGDVFT 253 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~~---~g~~yni~~g~~~s 253 (360)
..+.+.+|+|+++++++..+.. .|++|+|.+|..+|
T Consensus 231 -------~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~s 269 (269)
T 4dmm_A 231 -------GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA 269 (269)
T ss_dssp -------SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCCC
T ss_pred -------CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeecC
Confidence 2356788999999998875433 49999998886553
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.52 E-value=1e-13 Score=126.43 Aligned_cols=200 Identities=11% Similarity=0.023 Sum_probs=132.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~~ 77 (360)
||++++++|++ +|++|++++|+.... ...++ ++.+|++|++++.++++.+ . ++|+|+|+|+....
T Consensus 26 IG~aia~~l~~------~G~~V~~~~r~~~~~---~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~lv~nAg~~~~ 94 (269)
T 3vtz_A 26 IGLAVVDALVR------YGAKVVSVSLDEKSD---VNVSD-HFKIDVTNEEEVKEAVEKTTKKYG-RIDILVNNAGIEQY 94 (269)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCC--C---TTSSE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCchhc---cCcee-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCC
Confidence 79999999999 999999999986543 23677 8999999999988877643 1 27999999985321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.|+.++++++...++.. +..+||++||...|... +
T Consensus 95 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------------~- 148 (269)
T 3vtz_A 95 SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-GHGSIINIASVQSYAAT------------------------K- 148 (269)
T ss_dssp CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSBC------------------------T-
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhccCC------------------------C-
Confidence 234567899999999999987533211 45689999998766421 0
Q ss_pred CCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhH------HHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 149 PNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSL------LTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 149 p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
+...|+.+|...+ ...++.+..++|+.|+++......... ..-.....+. ...
T Consensus 149 ~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------- 216 (269)
T 3vtz_A 149 NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWG--RQH---------- 216 (269)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHH--HHS----------
T ss_pred CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHH--hcC----------
Confidence 1345888876544 234899999999999876311000000 0000000000 011
Q ss_pred ccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
....+.+.+|+|+++++++... ...|++++|.+|...
T Consensus 217 --p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 255 (269)
T 3vtz_A 217 --PMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLS 255 (269)
T ss_dssp --TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred --CCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCccc
Confidence 1234567999999999887543 235999999887643
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.1e-13 Score=125.26 Aligned_cols=206 Identities=9% Similarity=0.012 Sum_probs=130.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC-CC-----C-C--CCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP-SW-----F-P--SSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~-~~-----~-~--~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|++.. .. . . ..++. ++.+|++|++++.++++.+ . ++|+|
T Consensus 16 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~iD~l 87 (260)
T 1x1t_A 16 IGLGIATALAA------QGADIVLNGFGDAAEIEKVRAGLAAQHGVKVL-YDGADLSKGEAVRGLVDNAVRQMG-RIDIL 87 (260)
T ss_dssp HHHHHHHHHHH------TTCEEEEECCSCHHHHHHHHHHHHHHHTSCEE-EECCCTTSHHHHHHHHHHHHHHHS-CCSEE
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCcchHHHHHHHHHHhccCCcEE-EEECCCCCHHHHHHHHHHHHHhcC-CCCEE
Confidence 79999999999 89999999987543 10 0 0 24678 8999999999988877632 1 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 88 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~----------------- 149 (260)
T 1x1t_A 88 VNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAHGLVAS----------------- 149 (260)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC-----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECcHHhCcCC-----------------
Confidence 999985321 234578999999999999986543211 46799999997654310
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCe-eee
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPF-RYL 208 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 208 (360)
+ +...|+.+|...+ ...++.+.+++|+.|.+|.......... ...+... ...
T Consensus 150 -------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---------~~~~~~~~~~~ 212 (260)
T 1x1t_A 150 -------A-NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALA---------EKNGVDQETAA 212 (260)
T ss_dssp -------T-TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------
T ss_pred -------C-CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhc---------cccCCchHHHH
Confidence 1 2345888776443 3468999999999999874322110000 0000000 000
Q ss_pred CCc-ccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 209 GNK-YTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 209 G~~-~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
-.. ........+.+.+|+|+++++++..+ ...|++|++.+|.
T Consensus 213 ~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 213 RELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp --CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence 000 00001234678999999999887542 2358999997774
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=8.6e-14 Score=126.19 Aligned_cols=193 Identities=10% Similarity=0.005 Sum_probs=131.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|++.... .....+. ++.+|++|++++.++++.+ . ++|+|||+|+
T Consensus 19 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~iD~lv~~Ag 90 (260)
T 1nff_A 19 MGASHVRAMVA------EGAKVVFGDILDEEGKAMAAELADAAR-YVHLDVTQPAQWKAAVDTAVTAFG-GLHVLVNNAG 90 (260)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHTGGGEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhhcCce-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 79999999999 8999999999753210 0113477 8999999999988887732 1 1799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---------------------- 147 (260)
T 1nff_A 91 ILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLAGT---------------------- 147 (260)
T ss_dssp CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC----------------------
T ss_pred CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEeehhhcCCC----------------------
Confidence 5321 234578999999987777765432211 46799999998665310
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+ +...|+.+|...+ ...|++++++||+.|+++... .. ...+. ..
T Consensus 148 --~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~---------------~~~~~--~~---- 201 (260)
T 1nff_A 148 --V-ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WV---------------PEDIF--QT---- 201 (260)
T ss_dssp --T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TS---------------CTTCS--CC----
T ss_pred --C-CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cc---------------hhhHH--hC----
Confidence 1 2345888776544 246899999999999987432 00 00000 00
Q ss_pred cccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 252 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~ 252 (360)
....+.+.+|+|+++++++..+. ..|++|++.+|...
T Consensus 202 -~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~ 240 (260)
T 1nff_A 202 -ALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVA 240 (260)
T ss_dssp -SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred -ccCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence 11245778999999998875432 34899999888643
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=8.4e-14 Score=127.16 Aligned_cols=194 Identities=10% Similarity=0.040 Sum_probs=130.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEec-CCCCCC-----C---CCCCceeeEeeccCCh----HHHHHHHccC----CCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTAR-RPPPSW-----F---PSSHVDHYITFDALDS----TDTTQKLSSI----SQE 64 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r-~~~~~~-----~---~~~~v~~~v~gDl~d~----~~l~~~l~~~----~~~ 64 (360)
||++++++|++ +|++|++++| ++.... . ...++. ++.+|++|+ +++.++++.+ . +
T Consensus 23 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~~~g-~ 94 (276)
T 1mxh_A 23 IGHSIAVRLHQ------QGFRVVVHYRHSEGAAQRLVAELNAARAGSAV-LCKGDLSLSSSLLDCCEDIIDCSFRAFG-R 94 (276)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE-EEECCCSSSTTHHHHHHHHHHHHHHHHS-C
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCChHHHHHHHHHHHHhcCCceE-EEeccCCCccccHHHHHHHHHHHHHhcC-C
Confidence 79999999999 8999999999 532110 0 034678 999999999 8887777632 1 1
Q ss_pred ccEEEEeeeecC--------------------CChhHhhhhhHHHHHHHHHHHHhhccCCCCc------cEEEEeccCcc
Q 037566 65 VTHLFWVMFQRL--------------------KSEEINISNNSTMFKNVMSVVVDSNKGRSRL------RHVTLLMGTKH 118 (360)
Q Consensus 65 v~~V~h~A~~~~--------------------~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v------~r~v~~SS~~v 118 (360)
+|+|||+|+... .+.+..+++|+.|+.++++++...++ .+. .+||++||...
T Consensus 95 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~~~~~~g~iv~isS~~~ 172 (276)
T 1mxh_A 95 CDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG--EGGAWRSRNLSVVNLCDAMT 172 (276)
T ss_dssp CCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCCEEEEEECCGGG
T ss_pred CCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh--cCCCCCCCCcEEEEECchhh
Confidence 799999998532 11235789999999999999988642 134 79999999765
Q ss_pred ccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhH
Q 037566 119 YMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSL 188 (360)
Q Consensus 119 Yg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~ 188 (360)
|... + +...|+.+|...+ ...|+.+.+++|+.|++| . .....
T Consensus 173 ~~~~------------------------~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~~~- 224 (276)
T 1mxh_A 173 DLPL------------------------P-GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMPQE- 224 (276)
T ss_dssp GSCC------------------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSCHH-
T ss_pred cCCC------------------------C-CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCCHH-
Confidence 5310 1 1345888776543 345899999999999998 2 21111
Q ss_pred HHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 189 LTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
....+. ...|+ + +++.+.+|+|+++++++..+ ...|++|++.+|.
T Consensus 225 ----~~~~~~--~~~p~---~--------r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~ 271 (276)
T 1mxh_A 225 ----TQEEYR--RKVPL---G--------QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271 (276)
T ss_dssp ----HHHHHH--TTCTT---T--------SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ----HHHHHH--hcCCC---C--------CCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence 011111 11221 1 12567999999999887542 2348999997774
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=126.84 Aligned_cols=217 Identities=9% Similarity=-0.015 Sum_probs=138.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------------------CCCCCceeeEeeccCChHHHHHHHccC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------------------FPSSHVDHYITFDALDSTDTTQKLSSI- 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------------------~~~~~v~~~v~gDl~d~~~l~~~l~~~- 61 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+
T Consensus 22 IG~~ia~~l~~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~ 94 (287)
T 3pxx_A 22 QGRSHAVKLAE------EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAY-TAEVDVRDRAAVSRELANAV 94 (287)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHH
Confidence 79999999999 9999999998732100 0134678 8999999999988877633
Q ss_pred ---CCCccEEEEeeeecCC-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCC
Q 037566 62 ---SQEVTHLFWVMFQRLK-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQ 131 (360)
Q Consensus 62 ---~~~v~~V~h~A~~~~~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~ 131 (360)
. ++|+|+|+|+.... +.+..+++|+.|+.++++++...++ +-.+||++||...+....
T Consensus 95 ~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~~~-------- 162 (287)
T 3pxx_A 95 AEFG-KLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLT---SGASIITTGSVAGLIAAA-------- 162 (287)
T ss_dssp HHHS-CCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC---TTCEEEEECCHHHHHHHH--------
T ss_pred HHcC-CCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh---cCcEEEEeccchhccccc--------
Confidence 1 27999999985321 3456889999999999999987631 335899999987765321
Q ss_pred cCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhc
Q 037566 132 LIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQ 201 (360)
Q Consensus 132 ~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~ 201 (360)
..+..|..+. .+...|+.+|...+ ...|+.+..++|+.|..+..... .. +.......
T Consensus 163 ----~~~~~~~~~~--~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~------~~~~~~~~ 229 (287)
T 3pxx_A 163 ----QPPGAGGPQG--PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSA-PM------YRQFRPDL 229 (287)
T ss_dssp ----CCC-----CH--HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSH-HH------HHHHCTTS
T ss_pred ----ccccccccCC--CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc-ch------hhhhcccc
Confidence 2233333321 12446888876544 34589999999999988753221 00 00000000
Q ss_pred CCCee------eeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 202 GLPFR------YLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 202 ~~~~~------~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
..+.. +..... ....+.+.+|+|+++++++... ...|++++|.+|..++
T Consensus 230 ~~~~~~~~~~~~~~~~~---~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 230 EAPSRADALLAFPAMQA---MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp SSCCHHHHHHHGGGGCS---SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred ccchhHHHHhhhhhhcc---cCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 00000 000000 1135678999999999887532 2359999998887654
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.9e-14 Score=127.35 Aligned_cols=200 Identities=8% Similarity=-0.012 Sum_probs=131.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~~ 77 (360)
||++++++|++ +|++|++++|+.... .... .+.+|++|.+++.++++.+ . ++|+|+|+|+....
T Consensus 40 IG~aia~~la~------~G~~V~~~~r~~~~~----~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g-~iD~lvnnAg~~~~ 107 (266)
T 3uxy_A 40 IGGAVVTALRA------AGARVAVADRAVAGI----AADL-HLPGDLREAAYADGLPGAVAAGLG-RLDIVVNNAGVISR 107 (266)
T ss_dssp HHHHHHHHHHH------TTCEEEECSSCCTTS----CCSE-ECCCCTTSHHHHHHHHHHHHHHHS-CCCEEEECCCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHH----Hhhh-ccCcCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCC
Confidence 79999999999 899999999976542 1224 6789999998887766532 2 27999999985321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.|+.++++++...++.. +..+||++||...|.. .+
T Consensus 108 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~------------------------~~- 161 (266)
T 3uxy_A 108 GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNVASCWGLRP------------------------GP- 161 (266)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTBC------------------------CT-
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCCC------------------------CC-
Confidence 234578899999999999985432211 4579999998765421 01
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchh--HHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNS--LLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
+...|+.+|...+ ...|+.+.+++|+.|+++........ ...-.....+. ... .
T Consensus 162 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--~~~------------p 227 (266)
T 3uxy_A 162 GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELG--RTV------------P 227 (266)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHH--TTS------------T
T ss_pred CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHH--hcC------------C
Confidence 2445888876544 34589999999999988632110000 00000000010 111 1
Q ss_pred cccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc
Q 037566 217 FCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 253 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s 253 (360)
...+.+.+|+|+++++++..+. ..|++|+|.+|..+|
T Consensus 228 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 228 LGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence 2346679999999998876432 349999998887653
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.9e-13 Score=126.78 Aligned_cols=146 Identities=13% Similarity=0.069 Sum_probs=103.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC------------CCCCCceeeEeeccCChHHHHHHHccC----CCCc
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW------------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEV 65 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~------------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v 65 (360)
||++++++|++ +|++|++.+|+..... ....++. ++.+|++|++++.++++.+ . ++
T Consensus 17 IG~aia~~L~~------~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~-~~~~Dvtd~~~v~~~~~~~~~~~g-~i 88 (324)
T 3u9l_A 17 FGRLTAEALAG------AGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLR-TLELDVQSQVSVDRAIDQIIGEDG-RI 88 (324)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CC
T ss_pred HHHHHHHHHHH------CCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEE-EEEeecCCHHHHHHHHHHHHHHcC-CC
Confidence 89999999999 9999999998742210 0134688 9999999999998888733 1 17
Q ss_pred cEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 66 THLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 66 ~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
|+|+|+|+.... +....+++|+.|+.++++++...++.. +..+||++||++.++..
T Consensus 89 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~iV~isS~~~~~~~-------------- 153 (324)
T 3u9l_A 89 DVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLLIWISSSSSAGGT-------------- 153 (324)
T ss_dssp SEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC--------------
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEecchhccCC--------------
Confidence 999999985321 234578999999999999995332111 56799999997655311
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
. + ....|+.+|...+ ...|+.+++++|+.|.++.
T Consensus 154 ~---------~-~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 154 P---------P-YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp C---------S-SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred C---------C-cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence 0 0 1345888886554 3468999999999998764
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.51 E-value=4.3e-13 Score=123.15 Aligned_cols=198 Identities=9% Similarity=0.004 Sum_probs=132.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
.||++++++|++ +|++|++++|++... .. ...++. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 34 gIG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~lv~ 105 (285)
T 2p91_A 34 SIAYGIAKSFHR------EGAQLAFTYATPKLEKRVREIAKGFGSDL-VVKCDVSLDEDIKNLKKFLEENWG-SLDIIVH 105 (285)
T ss_dssp SHHHHHHHHHHH------TTCEEEEEESSGGGHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHHHHHHHTS-CCCEEEE
T ss_pred cHHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHHhcCCeE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 389999999999 899999999975310 00 012467 8999999999988877643 2 2799999
Q ss_pred eeeecCC-------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 71 VMFQRLK-------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 71 ~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
+|+.... +.+..+++|+.|+.++++++...++. +-.+||++||...+...
T Consensus 106 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~g~iv~isS~~~~~~~--------------- 168 (285)
T 2p91_A 106 SIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEG--RNGAIVTLSYYGAEKVV--------------- 168 (285)
T ss_dssp CCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTT--SCCEEEEEECGGGTSBC---------------
T ss_pred CCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCEEEEEccchhccCC---------------
Confidence 9985321 23457899999999999999876421 12699999987544210
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|++|.......... ....+.+ ..|+
T Consensus 169 ---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~--~~p~-- 231 (285)
T 2p91_A 169 ---------P-HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHL---LMEHTTK--VNPF-- 231 (285)
T ss_dssp ---------T-TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHH---HHHHHHH--HSTT--
T ss_pred ---------C-CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHH---HHHHHHh--cCCC--
Confidence 0 1335888776544 3568999999999999985432111111 1111111 1121
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..+.+++|+|+++++++..+ ...|++|++.+|.
T Consensus 232 ----------~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 232 ----------GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY 266 (285)
T ss_dssp ----------SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred ----------CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 12456899999999887532 2358999997774
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=5.1e-14 Score=126.52 Aligned_cols=202 Identities=9% Similarity=0.007 Sum_probs=132.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC--
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK-- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~-- 77 (360)
||++++++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.... +|+|+|+|+....
T Consensus 18 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id~lv~~Ag~~~~~~ 89 (246)
T 2ag5_A 18 IGQAAALAFAR------EGAKVIATDINESKLQELEKYPGIQ-TRVLDVTKKKQIDQFANEVER-LDVLFNVAGFVHHGT 89 (246)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHGGGGGSTTEE-EEECCTTCHHHHHHHHHHCSC-CSEEEECCCCCCCBC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHhccCce-EEEeeCCCHHHHHHHHHHhCC-CCEEEECCccCCCCC
Confidence 79999999999 899999999975321 00112678 899999999999887776543 8999999985321
Q ss_pred -------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCC
Q 037566 78 -------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPN 150 (360)
Q Consensus 78 -------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~ 150 (360)
+.+..+++|+.|+.++++++...++.. +..+||++||...+.. . +.+.
T Consensus 90 ~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~---------------~---------~~~~ 144 (246)
T 2ag5_A 90 VLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVK---------------G---------VVNR 144 (246)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTB---------------C---------CTTB
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechHhCcC---------------C---------CCCC
Confidence 234578999999999999986532211 4679999998765431 0 0124
Q ss_pred CcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchh-HHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 151 FYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNS-LLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 151 ~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
..|+.+|...+ ...|++++++||+.|++|........ ...-.....+.+ ..|+ ..
T Consensus 145 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~------------~~ 210 (246)
T 2ag5_A 145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK--RQKT------------GR 210 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH--TCTT------------SS
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHh--cCCC------------CC
Confidence 45888776544 24589999999999999742110000 000000111111 1111 12
Q ss_pred ccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 220 MSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
+.+.+|+|+++++++..+ ...|+.+++.+|.
T Consensus 211 ~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 211 FATAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (246)
T ss_dssp CEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred CCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 456889999999887543 2358999987764
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.6e-14 Score=128.23 Aligned_cols=204 Identities=11% Similarity=-0.029 Sum_probs=134.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|+++++++++.+ . ++|+|+|+|+
T Consensus 39 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv~nAg 110 (277)
T 4dqx_A 39 IGRATAELFAK------NGAYVVVADVNEDAAVRVANEIGSKAF-GVRVDVSSAKDAESMVEKTTAKWG-RVDVLVNNAG 110 (277)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhCCceE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 79999999999 9999999998753210 0134678 8999999999988877643 1 1799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---------------------- 167 (277)
T 4dqx_A 111 FGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-GGGSIINTTSYTATSAI---------------------- 167 (277)
T ss_dssp CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECCGGGTSCC----------------------
T ss_pred cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhCcCC----------------------
Confidence 5321 234577899999999999987654312 45699999997655310
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcch-hHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNN-SLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
.+...|+.+|...+ ...|+.+.+++|+.|..+....... ..........+. ...|
T Consensus 168 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~--------- 233 (277)
T 4dqx_A 168 ---ADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFN--ARAV--------- 233 (277)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHH--TTST---------
T ss_pred ---CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHH--hcCc---------
Confidence 12445888876544 3458999999999997753100000 000000000000 1111
Q ss_pred ccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 253 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s 253 (360)
...+.+.+|+|+++++++.... ..|+++++.+|..++
T Consensus 234 ---~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 234 ---MDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp ---TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred ---ccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence 2245679999999998875432 359999998887553
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.51 E-value=9e-14 Score=125.80 Aligned_cols=203 Identities=9% Similarity=0.004 Sum_probs=133.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 18 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~ 89 (257)
T 3imf_A 18 MGKGMATRFAK------EGARVVITGRTKEKLEEAKLEIEQFPGQIL-TVQMDVRNTDDIQKMIEQIDEKFG-RIDILIN 89 (257)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCCSTTCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 999999999975321 01234688 9999999999988877643 1 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++...+..+||++||...+...
T Consensus 90 nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------- 150 (257)
T 3imf_A 90 NAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG------------------- 150 (257)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-------------------
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-------------------
Confidence 9984321 234578999999999999986532101135689999987544210
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------c-CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------Y-SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~-~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ ....|+.+|...+ . ..|+.+.+++|+.|.++.......... .....+. ...|
T Consensus 151 -----~-~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~--~~~~~~~--~~~p------ 214 (257)
T 3imf_A 151 -----P-GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISE--EMAKRTI--QSVP------ 214 (257)
T ss_dssp -----T-TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------CCSHHHH--TTST------
T ss_pred -----C-CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCH--HHHHHHH--hcCC------
Confidence 1 1345887775433 2 348999999999999875422110000 0000000 1111
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 253 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s 253 (360)
...+.+.+|+|+++++++..+. ..|++++|.+|..++
T Consensus 215 ------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 215 ------LGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp ------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred ------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence 1235678999999998875432 359999998887654
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-13 Score=126.55 Aligned_cols=200 Identities=12% Similarity=0.078 Sum_probs=125.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 41 IG~aia~~la~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv 112 (280)
T 4da9_A 41 IGLGIARALAA------SGFDIAITGIGDAEGVAPVIAELSGLGARVI-FLRADLADLSSHQATVDAVVAEFG-RIDCLV 112 (280)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCCHHHHHHHHHHHHHTTCCEE-EEECCTTSGGGHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCeEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 89999999999 999999999754220 00135688 9999999999888877633 1 279999
Q ss_pred Eeeeec--CC---------ChhHhhhhhHHHHHHHHHHHHhhccCC--CCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 70 WVMFQR--LK---------SEEINISNNSTMFKNVMSVVVDSNKGR--SRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 70 h~A~~~--~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~--~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
|+|+.. .. +.+..+++|+.|+.++++++...++.. .+..+||++||...+...
T Consensus 113 nnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-------------- 178 (280)
T 4da9_A 113 NNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS-------------- 178 (280)
T ss_dssp EECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------------------
T ss_pred ECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC--------------
Confidence 999862 11 234578999999999999987653211 114589999987654210
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
+ +...|+.+|...+ ...|+.+..++|+.|..+......... ...+ .....
T Consensus 179 ----------~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~-~~~~~--- 238 (280)
T 4da9_A 179 ----------P-ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY-----DGLI-ESGLV--- 238 (280)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------
T ss_pred ----------C-CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH-----HHHH-hhcCC---
Confidence 0 1335888776443 346899999999999886432211100 0000 00011
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 252 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~ 252 (360)
....+.+.+|+|+++++++.... ..|++++|.+|..+
T Consensus 239 ---------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 239 ---------PMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSI 277 (280)
T ss_dssp ------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred ---------CcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence 12245678999999998876443 35999999877543
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.51 E-value=3.3e-13 Score=123.36 Aligned_cols=212 Identities=10% Similarity=-0.008 Sum_probs=136.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------------------CCCCCceeeEeeccCChHHHHHHHccC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------------------FPSSHVDHYITFDALDSTDTTQKLSSI- 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------------------~~~~~v~~~v~gDl~d~~~l~~~l~~~- 61 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+
T Consensus 25 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~ 97 (278)
T 3sx2_A 25 QGRAHAVRLAA------DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIV-ARQADVRDRESLSAALQAGL 97 (278)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------CCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEE-EEeCCCCCHHHHHHHHHHHH
Confidence 79999999999 9999999998732100 0124688 9999999999988887632
Q ss_pred ---CCCccEEEEeeeecCC-----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcC
Q 037566 62 ---SQEVTHLFWVMFQRLK-----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 62 ---~~~v~~V~h~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
. .+|+|+|+|+.... +.+..+++|+.|+.++++++...++....-.+||++||...+...
T Consensus 98 ~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 165 (278)
T 3sx2_A 98 DELG-RLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV----------- 165 (278)
T ss_dssp HHHC-CCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-----------
T ss_pred HHcC-CCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC-----------
Confidence 2 27999999986422 345678999999999999987643211124689999987654310
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGL 203 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~ 203 (360)
.. + .| +...|+.+|...+ ...++.+..++|+.|++|........ ..+..... ...
T Consensus 166 ------~~--~-~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~-~~~ 230 (278)
T 3sx2_A 166 ------GS--A-DP-GSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTR----EWLAKMAA-ATD 230 (278)
T ss_dssp ------CC--S-SH-HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHH----HHHHHHHH-HCC
T ss_pred ------cc--C-CC-CchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHH----HHHhhccc-hhh
Confidence 00 0 01 2345888876443 34689999999999998754321110 01100111 111
Q ss_pred CeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 204 PFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 204 ~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
.....+... . ..+.+.+|+|+++++++... ...|++++|.+|-.
T Consensus 231 ~~~~~~~~~---p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 276 (278)
T 3sx2_A 231 TPGAMGNAM---P-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL 276 (278)
T ss_dssp --CTTSCSS---S-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred hhhhhhhhc---C-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence 111112211 2 46778999999999887532 24599999987753
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.50 E-value=7e-13 Score=117.24 Aligned_cols=186 Identities=14% Similarity=0.108 Sum_probs=129.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec-CC---
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR-LK--- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~-~~--- 77 (360)
||++++++|++ +|++|++++|+.. +|++|+++++++++.+.. +|+++|+|+.. ..
T Consensus 18 IG~~~a~~l~~------~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~-id~lv~nAg~~~~~~~~ 76 (223)
T 3uce_A 18 IGAELAKQLES------EHTIVHVASRQTG--------------LDISDEKSVYHYFETIGA-FDHLIVTAGSYAPAGKV 76 (223)
T ss_dssp HHHHHHHHHCS------TTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCS-EEEEEECCCCCCCCSCT
T ss_pred HHHHHHHHHHH------CCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCC-CCEEEECCCCCCCCCCc
Confidence 79999999998 8999999988542 799999999998886543 89999999854 11
Q ss_pred ------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCC
Q 037566 78 ------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNF 151 (360)
Q Consensus 78 ------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~ 151 (360)
+.+..+++|+.|+.++++++...++ .-.+||++||...+... + +..
T Consensus 77 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~---~~g~iv~~sS~~~~~~~------------------------~-~~~ 128 (223)
T 3uce_A 77 VDVEVTQAKYAFDTKFWGAVLAAKHGARYLK---QGGSITLTSGMLSRKVV------------------------A-NTY 128 (223)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHGGGEE---EEEEEEEECCGGGTSCC------------------------T-TCH
T ss_pred ccCCHHHHHhhheeeeeeHHHHHHHHHhhcc---CCeEEEEecchhhccCC------------------------C-Cch
Confidence 2345789999999999999987632 12489999987654310 1 234
Q ss_pred cHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccC
Q 037566 152 YYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSD 222 (360)
Q Consensus 152 ~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~ 222 (360)
.|+.+|...+ ... +.+..++|+.|..+.......... -..+....+ ..|+ ..+.+
T Consensus 129 ~Y~asK~a~~~~~~~la~e~~~-i~vn~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~--~~~~------------~~~~~ 192 (223)
T 3uce_A 129 VKAAINAAIEATTKVLAKELAP-IRVNAISPGLTKTEAYKGMNADDR-DAMYQRTQS--HLPV------------GKVGE 192 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-SEEEEEEECSBCSGGGTTSCHHHH-HHHHHHHHH--HSTT------------CSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhhcC-cEEEEEEeCCCcchhhhhcchhhH-HHHHHHHhh--cCCC------------CCccC
Confidence 5888776544 223 999999999999874332221110 011111111 1121 23567
Q ss_pred HHHHHHHHHHHHcCCCCCCCceeccCCCcc
Q 037566 223 SRVLAEQQIWAATTDRAKNQAFNCTNGDVF 252 (360)
Q Consensus 223 v~dla~a~~~a~~~~~~~g~~yni~~g~~~ 252 (360)
.+|+|+++++++..+...|+++++.+|..+
T Consensus 193 ~~dvA~~~~~l~~~~~~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 193 ASDIAMAYLFAIQNSYMTGTVIDVDGGALL 222 (223)
T ss_dssp HHHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHHccCCCCCCcEEEecCCeec
Confidence 899999999988766567999999888654
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.50 E-value=1.5e-13 Score=126.23 Aligned_cols=196 Identities=12% Similarity=0.074 Sum_probs=129.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|++... .....++. ++.+|++|+++++++++.+ . ++|.|||
T Consensus 56 IG~~la~~L~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~~-~id~li~ 127 (285)
T 2c07_A 56 IGREIAKMLAK------SVSHVICISRTQKSCDSVVDEIKSFGYESS-GYAGDVSKKEEISEVINKILTEHK-NVDILVN 127 (285)
T ss_dssp HHHHHHHHHTT------TSSEEEEEESSHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHHHHHHHHCS-CCCEEEE
T ss_pred HHHHHHHHHHH------cCCEEEEEcCCHHHHHHHHHHHHhcCCcee-EEECCCCCHHHHHHHHHHHHHhcC-CCCEEEE
Confidence 79999999998 899999988764321 00134678 8999999999988887532 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++. .+..+||++||...+...
T Consensus 128 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~------------------- 187 (285)
T 2c07_A 128 NAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMIN-NRYGRIINISSIVGLTGN------------------- 187 (285)
T ss_dssp CCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHH-HTCEEEEEECCTHHHHCC-------------------
T ss_pred CCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-CCCCEEEEECChhhccCC-------------------
Confidence 9985321 23467899999998888888643210 146899999997654310
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+ +...|+.+|...+ ...+++++++||+.|.++........ ....+. ...|
T Consensus 188 -----~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~~------- 247 (285)
T 2c07_A 188 -----V-GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ-----IKKNII--SNIP------- 247 (285)
T ss_dssp -----T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH-----HHHHHH--TTCT-------
T ss_pred -----C-CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHH-----HHHHHH--hhCC-------
Confidence 0 1345888776443 34589999999999998743221111 001111 1111
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
...+.+.+|+|+++++++..+. ..|+.|++.+|.
T Consensus 248 -----~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 248 -----AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp -----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred -----CCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence 1235789999999998876432 358999998775
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.50 E-value=7.4e-14 Score=128.13 Aligned_cols=204 Identities=11% Similarity=-0.080 Sum_probs=136.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 20 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~lvn 91 (280)
T 3tox_A 20 IGRAAALLFAR------EGAKVVVTARNGNALAELTDEIAGGGGEAA-ALAGDVGDEALHEALVELAVRRFG-GLDTAFN 91 (280)
T ss_dssp HHHHHHHHHHH------TTCEEEECCSCHHHHHHHHHHHTTTTCCEE-ECCCCTTCHHHHHHHHHHHHHHHS-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 899999999875321 01235688 9999999999988877632 2 2799999
Q ss_pred eeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +-.+||++||...|...
T Consensus 92 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 152 (280)
T 3tox_A 92 NAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-GGGSLTFTSSFVGHTAG------------------ 152 (280)
T ss_dssp CCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCSBTTTBC------------------
T ss_pred CCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcChhhCcCC------------------
Confidence 9985311 234578999999999999987643211 34689999997655210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+ +...|+.+|...+ ...|+.+.+++|+.|.+|........... .....+. ...|
T Consensus 153 -----~~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~--~~~p------ 217 (280)
T 3tox_A 153 -----FA-GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAP-ETRGFVE--GLHA------ 217 (280)
T ss_dssp -----CT-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCT-HHHHHHH--TTST------
T ss_pred -----CC-CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCH-HHHHHHh--ccCc------
Confidence 01 2345888775443 35689999999999998753221100000 0001111 1112
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
...+.+.+|+|+++++++..+ ...|++++|.+|..++
T Consensus 218 ------~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 256 (280)
T 3tox_A 218 ------LKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVT 256 (280)
T ss_dssp ------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred ------cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccc
Confidence 123567899999999888643 2359999998887553
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-13 Score=121.89 Aligned_cols=192 Identities=13% Similarity=0.050 Sum_probs=124.0
Q ss_pred chHHHHHHHhcCCCCCCCC--cEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccCCC-----CccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGP--WKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSISQ-----EVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~~~-----~v~~V~h 70 (360)
||++++++|++ +| ++|++++|++.... ....+++ ++.+|++|++++.++++.+.. ++|+|||
T Consensus 15 iG~~la~~l~~------~g~~~~V~~~~r~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~ 87 (250)
T 1yo6_A 15 IGLGLVQQLVK------DKNIRHIIATARDVEKATELKSIKDSRVH-VLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLIN 87 (250)
T ss_dssp HHHHHHHHHHT------CTTCCEEEEEESSGGGCHHHHTCCCTTEE-EEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEE
T ss_pred HHHHHHHHHHh------cCCCcEEEEEecCHHHHHHHHhccCCceE-EEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 79999999999 89 99999999754320 1135788 999999999998888773300 1799999
Q ss_pred eeeecC-C---------ChhHhhhhhHHHHHHHHHHHHhhccCC-----CC-----ccEEEEeccCccccccccCCcccC
Q 037566 71 VMFQRL-K---------SEEINISNNSTMFKNVMSVVVDSNKGR-----SR-----LRHVTLLMGTKHYMGPVFDPSLVG 130 (360)
Q Consensus 71 ~A~~~~-~---------~~~~~~~vNv~gt~nll~a~~~~~~~~-----~~-----v~r~v~~SS~~vYg~~~~~~~~~g 130 (360)
+|+... . +.+..+++|+.|+.++++++...++.. ++ ..+||++||...+...
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------- 159 (250)
T 1yo6_A 88 NAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD-------- 159 (250)
T ss_dssp CCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT--------
T ss_pred CCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC--------
Confidence 998543 1 234578999999999999987643211 02 5799999998665321
Q ss_pred CcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhh
Q 037566 131 QLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRH 200 (360)
Q Consensus 131 ~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~ 200 (360)
+ .+..+ +.+...|+.+|...+ ...++.++++||+.|.++...
T Consensus 160 -------~-~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------------------ 211 (250)
T 1yo6_A 160 -------N-TSGSA--QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG------------------ 211 (250)
T ss_dssp -------C-CSTTS--SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------
T ss_pred -------c-ccccc--cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC------------------
Confidence 0 11111 123556888886554 235899999999988664210
Q ss_pred cCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCCC--CCCceeccCCCccc
Q 037566 201 QGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRA--KNQAFNCTNGDVFT 253 (360)
Q Consensus 201 ~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~--~g~~yni~~g~~~s 253 (360)
. ...++.+++|++++.++..+.. .|+.+. .+|..++
T Consensus 212 -~---------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~-~~g~~~~ 249 (250)
T 1yo6_A 212 -K---------------NAALTVEQSTAELISSFNKLDNSHNGRFFM-RNLKPYE 249 (250)
T ss_dssp -----------------------HHHHHHHHHHHTTCCGGGTTCEEE-TTEEECC
T ss_pred -C---------------CCCCCHHHHHHHHHHHHhcccccCCCeEEE-ECCcCCC
Confidence 0 0134578899999988875542 355444 4555444
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=5.1e-14 Score=128.88 Aligned_cols=201 Identities=14% Similarity=0.055 Sum_probs=131.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|++... .+ ...++. ++.+|++|++++.++++.+ . ++|+|||
T Consensus 34 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~lv~ 105 (277)
T 2rhc_B 34 IGLEIARRLGK------EGLRVFVCARGEEGLRTTLKELREAGVEAD-GRTCDVRSVPEIEALVAAVVERYG-PVDVLVN 105 (277)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHTC-SCSEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHHhC-CCCEEEE
Confidence 79999999999 899999999975321 00 134678 8999999999988777632 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhh--ccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDS--NKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~--~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+.... +.+..+++|+.|+.++++++.+. ++. .+..+||++||...+.. .
T Consensus 106 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~-~~~g~iv~isS~~~~~~---------------~-- 167 (277)
T 2rhc_B 106 NAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLE-RGTGRIVNIASTGGKQG---------------V-- 167 (277)
T ss_dssp CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHH-HTEEEEEEECCGGGTSC---------------C--
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhh-cCCeEEEEECccccccC---------------C--
Confidence 9985321 23457899999999999998654 211 14579999998754321 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHH------HHHHHHHHhhcCC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLT------LAVYATICRHQGL 203 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~------~~~~~~~~~~~~~ 203 (360)
+ +...|+.+|...+ ...++.+.++||+.|+++........... -.....+.+ ..
T Consensus 168 -------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 237 (277)
T 2rhc_B 168 -------V-HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA--RV 237 (277)
T ss_dssp -------T-TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHH--HS
T ss_pred -------C-CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHh--cC
Confidence 1 1345887776443 34689999999999987631110000000 000000000 01
Q ss_pred CeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 204 PFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 204 ~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
....+.+.+|+|+++++++..+ ...|++|+|.+|.
T Consensus 238 ------------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 238 ------------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp ------------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ------------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 1234678999999999887543 2358999998774
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.50 E-value=2.3e-13 Score=122.79 Aligned_cols=198 Identities=15% Similarity=0.133 Sum_probs=132.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++++..... ....++. ++.+|++|.++++++++.+ . ++|+|+
T Consensus 25 iG~~ia~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv 96 (256)
T 3ezl_A 25 IGTSICQRLHK------DGFRVVAGCGPNSPRRVKWLEDQKALGFDFY-ASEGNVGDWDSTKQAFDKVKAEVG-EIDVLV 96 (256)
T ss_dssp HHHHHHHHHHH------TTEEEEEEECTTCSSHHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHHHHHHTC-CEEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCCHHHHHHHHHHHHhcCCeeE-EEecCCCCHHHHHHHHHHHHHhcC-CCCEEE
Confidence 79999999999 9999999885443210 0134688 9999999999888877643 2 289999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 97 ~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 157 (256)
T 3ezl_A 97 NNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISSVNGQKGQ------------------ 157 (256)
T ss_dssp ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCCCGGGSC------------------
T ss_pred ECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchhhccCC------------------
Confidence 99985321 234578999999999988875432211 45789999987654210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ +...|+.+|...+ ...++.+.+++|+.|..+......... ...+.+ ..++
T Consensus 158 ------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----~~~~~~--~~~~----- 218 (256)
T 3ezl_A 158 ------F-GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDV-----LEKIVA--TIPV----- 218 (256)
T ss_dssp ------S-CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHH-----HHHHHH--HSTT-----
T ss_pred ------C-CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHH-----HHHHHh--cCCC-----
Confidence 1 2445888876433 346899999999999876322211110 111111 1121
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
..+.+.+|+|+++++++... ...|++|++.+|..+
T Consensus 219 -------~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 219 -------RRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp -------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred -------CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence 23456889999998887532 345999999887654
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.50 E-value=5.2e-13 Score=122.25 Aligned_cols=204 Identities=11% Similarity=0.013 Sum_probs=132.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------------------CCCCCCceeeEeeccCChHHHHHHHccC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------------------WFPSSHVDHYITFDALDSTDTTQKLSSI 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------------------~~~~~~v~~~v~gDl~d~~~l~~~l~~~ 61 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|+++++++++.+
T Consensus 27 IG~a~a~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~ 99 (280)
T 3pgx_A 27 QGRSHAVRLAA------EGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKAL-TRVLDVRDDAALRELVADG 99 (280)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------CCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 79999999999 999999999842110 01134677 8999999999988877642
Q ss_pred ----CCCccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcc
Q 037566 62 ----SQEVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSL 128 (360)
Q Consensus 62 ----~~~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~ 128 (360)
. ++|+|+|+|+.... +.+..+++|+.|+.++++++...++....-.+||++||...+...
T Consensus 100 ~~~~g-~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 172 (280)
T 3pgx_A 100 MEQFG-RLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT------ 172 (280)
T ss_dssp HHHHC-CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC------
T ss_pred HHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC------
Confidence 2 27999999985321 234578899999999999986543211124689999987654310
Q ss_pred cCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHH
Q 037566 129 VGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATIC 198 (360)
Q Consensus 129 ~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~ 198 (360)
+ ....|+.+|...+ ...|+.+.+++|+.|++|..... .. ... ..
T Consensus 173 ------------------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~--~~~---~~ 226 (280)
T 3pgx_A 173 ------------------P-GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--AM--MEI---FA 226 (280)
T ss_dssp ------------------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--HH--HHH---HH
T ss_pred ------------------C-CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--hh--hhh---hh
Confidence 1 1345888775443 34689999999999998753210 00 000 10
Q ss_pred hh--cCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 199 RH--QGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 199 ~~--~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
+. ....+...... .. -+.+++|+|+++++++..+. ..|++++|.+|.
T Consensus 227 ~~~~~~~~~~~~~~~----~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 227 RHPSFVHSFPPMPVQ----PN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp HCGGGGGGSCCBTTB----CS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred cCchhhhhhhhcccC----CC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 10 00000011111 12 36789999999998875432 358999997664
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=7.8e-14 Score=126.76 Aligned_cols=204 Identities=8% Similarity=-0.036 Sum_probs=135.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C-CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W-FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~-~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
.||++++++|++ +|++|++++|+.... . .....+. ++.+|++|++++.++++.+ . ++|+|||
T Consensus 27 giG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~ 98 (271)
T 3ek2_A 27 SIAYGIAKACKR------EGAELAFTYVGDRFKDRITEFAAEFGSEL-VFPCDVADDAQIDALFASLKTHWD-SLDGLVH 98 (271)
T ss_dssp SHHHHHHHHHHH------TTCEEEEEESSGGGHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHHHHHHHCS-CEEEEEE
T ss_pred cHHHHHHHHHHH------cCCCEEEEecchhhHHHHHHHHHHcCCcE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 389999999999 899999999874221 0 0123578 9999999999988877643 2 2899999
Q ss_pred eeeecC-----------C---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 71 VMFQRL-----------K---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 71 ~A~~~~-----------~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
+|+... . +....+++|+.|+.++++++...++ .-.+||++||.+.+...
T Consensus 99 nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~g~iv~isS~~~~~~~-------------- 161 (271)
T 3ek2_A 99 SIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLS---DDASLLTLSYLGAERAI-------------- 161 (271)
T ss_dssp CCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEE---EEEEEEEEECGGGTSBC--------------
T ss_pred CCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhc---cCceEEEEeccccccCC--------------
Confidence 998532 1 2345789999999999999987632 23489999987654310
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
| +...|+.+|...+ ...++.+.+++|+.|..+.......... ....+.+ ..|+
T Consensus 162 ----------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~~~- 224 (271)
T 3ek2_A 162 ----------P-NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGK---ILDFVES--NSPL- 224 (271)
T ss_dssp ----------T-TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHH---HHHHHHH--HSTT-
T ss_pred ----------C-CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHH---HHHHHHh--cCCc-
Confidence 1 1345888775443 3568999999999998864332111111 1111111 1121
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCCcccHHHH
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGDVFTWKSL 257 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~~~s~~el 257 (360)
..+.+.+|+|+++++++.. ....|+++++.+|..+++.++
T Consensus 225 -----------~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~ 266 (271)
T 3ek2_A 225 -----------KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGM 266 (271)
T ss_dssp -----------SSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC
T ss_pred -----------CCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhh
Confidence 2345688999999988764 234599999999988776654
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.49 E-value=1e-13 Score=125.41 Aligned_cols=201 Identities=9% Similarity=-0.003 Sum_probs=134.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccC---CCCccEEEEeeeecC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSI---SQEVTHLFWVMFQRL- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~---~~~v~~V~h~A~~~~- 76 (360)
||++++++|++ +|++|++++|+..... ....+++ ++.+|++|++++.++++.+ . ++|+++|+|+...
T Consensus 21 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~g-~id~lv~nAg~~~~ 92 (257)
T 3tl3_A 21 LGLATTKRLLD------AGAQVVVLDIRGEDVVADLGDRAR-FAAADVTDEAAVASALDLAETMG-TLRIVVNCAGTGNA 92 (257)
T ss_dssp HHHHHHHHHHH------HTCEEEEEESSCHHHHHHTCTTEE-EEECCTTCHHHHHHHHHHHHHHS-CEEEEEECGGGSHH
T ss_pred HHHHHHHHHHH------CCCEEEEEeCchHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHhC-CCCEEEECCCCCCC
Confidence 79999999999 8999999999643210 1135788 9999999999988877632 1 2899999998421
Q ss_pred ---------C---ChhHhhhhhHHHHHHHHHHHHhhccCC-------CCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 77 ---------K---SEEINISNNSTMFKNVMSVVVDSNKGR-------SRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 77 ---------~---~~~~~~~vNv~gt~nll~a~~~~~~~~-------~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
. +.+..+++|+.|+.++++++...++.. .+-.+||++||...+...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 157 (257)
T 3tl3_A 93 IRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ--------------- 157 (257)
T ss_dssp HHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH---------------
T ss_pred cccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC---------------
Confidence 1 245678999999999999998754310 134589999987654210
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+ +...|+.+|...+ ...++.+..++|+.|..+......... ...+. ...+.
T Consensus 158 ---------~-~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~~--~~~~~-- 218 (257)
T 3tl3_A 158 ---------I-GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEA-----RASLG--KQVPH-- 218 (257)
T ss_dssp ---------H-HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHH-----HHHHH--HTSSS--
T ss_pred ---------C-CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHH-----HHHHH--hcCCC--
Confidence 0 1345888776433 346899999999999876432211111 11111 11221
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCccc
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFT 253 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s 253 (360)
+ ..+.+.+|+|+++++++..+...|++++|.+|..++
T Consensus 219 ~---------~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 219 P---------SRLGNPDEYGALAVHIIENPMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp S---------CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred C---------CCccCHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence 1 135678999999999887766679999998887654
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-13 Score=125.47 Aligned_cols=199 Identities=12% Similarity=0.043 Sum_probs=127.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC-C-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP-S-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~-~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|+++.++... . . ....++. ++.+|++|.+++.++++.+ . ++|+||
T Consensus 38 IG~a~a~~l~~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~id~li 109 (272)
T 4e3z_A 38 IGAAVCRLAAR------QGWRVGVNYAANREAADAVVAAITESGGEAV-AIPGDVGNAADIAAMFSAVDRQFG-RLDGLV 109 (272)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCChhHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHhCC-CCCEEE
Confidence 79999999999 99999887443321 0 0 0135688 9999999999988887643 1 279999
Q ss_pred EeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccC--CCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 70 WVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKG--RSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 70 h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~--~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+|+.... +.+..+++|+.|+.++++++...++. ..+..+||++||...+...
T Consensus 110 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 174 (272)
T 4e3z_A 110 NNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS--------------- 174 (272)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC---------------
T ss_pred ECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC---------------
Confidence 99985321 23457899999999999998765321 1134689999997665311
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+.....|+.+|...+ ...|+.+.+++|+.|+++........ .....+ ....+
T Consensus 175 ---------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~--~~~~~--- 236 (272)
T 4e3z_A 175 ---------ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP----DRAREM--APSVP--- 236 (272)
T ss_dssp ---------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------------CCT---
T ss_pred ---------CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCCh----HHHHHH--hhcCC---
Confidence 001234888776544 34589999999999998743210000 000000 00111
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
...+.+++|+|+++++++..+ ...|++|||.+|.
T Consensus 237 ---------~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~ 272 (272)
T 4e3z_A 237 ---------MQRAGMPEEVADAILYLLSPSASYVTGSILNVSGGR 272 (272)
T ss_dssp ---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ---------cCCCcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence 123456899999999887533 2348999998763
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.49 E-value=6.2e-14 Score=127.55 Aligned_cols=201 Identities=9% Similarity=0.075 Sum_probs=133.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC---CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF---PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~---~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .+ ...++. ++.+|++|+++++++++.+ . ++|+|+
T Consensus 32 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv 103 (266)
T 4egf_A 32 IGADIARAFAA------AGARLVLSGRDVSELDAARRALGEQFGTDVH-TVAIDLAEPDAPAELARRAAEAFG-GLDVLV 103 (266)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHHCCCEE-EEECCTTSTTHHHHHHHHHHHHHT-SCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 999999999975321 00 135688 9999999999888777632 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++....-.+||++||...|...
T Consensus 104 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------ 165 (266)
T 4egf_A 104 NNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL------------------ 165 (266)
T ss_dssp EECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------------
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC------------------
Confidence 99985321 234578999999999999987643211113589999987654310
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ +...|+.+|...+ ...|+.+..++|+.|..+......... .....+. ...|+
T Consensus 166 ------~-~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~--~~~p~----- 228 (266)
T 4egf_A 166 ------P-DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDE---AKSAPMI--ARIPL----- 228 (266)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSH---HHHHHHH--TTCTT-----
T ss_pred ------C-CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccCh---HHHHHHH--hcCCC-----
Confidence 1 1345888776443 346899999999999876321100000 0000110 11221
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
..+.+.+|+|+++++++... ...|++++|.+|..+
T Consensus 229 -------~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 229 -------GRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp -------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred -------CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence 23456899999999887542 345999999887644
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.9e-13 Score=124.81 Aligned_cols=202 Identities=11% Similarity=0.063 Sum_probs=129.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccC-----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSI-----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~-----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|++.... ....++. ++.+|++|++++.++++.+ . .+|+|+
T Consensus 33 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~g-~id~lv 104 (273)
T 1ae1_A 33 IGYAIVEELAG------LGARVYTCSRNEKELDECLEIWREKGLNVE-GSVCDLLSRTERDKLMQTVAHVFDG-KLNILV 104 (273)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHTTS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHHcCC-CCcEEE
Confidence 79999999999 8999999999753210 0134678 8999999999988877531 2 289999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 105 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~------------------ 165 (273)
T 1ae1_A 105 NNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGFSAL------------------ 165 (273)
T ss_dssp ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGTSCC------------------
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHhhcCCC------------------
Confidence 99985321 234567899999999999986432211 45799999998765310
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHH-HHHHHHHHHhhcCCCeeeeC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLL-TLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G 209 (360)
| +...|+.+|...+ ...|+.+.+++|+.|++|.......... .-.....+.+ ..|+
T Consensus 166 ------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~p~---- 232 (273)
T 1ae1_A 166 ------P-SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV--KTPM---- 232 (273)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHH--HSTT----
T ss_pred ------C-CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHh--cCCC----
Confidence 1 1345888776544 3458999999999999975322111000 0000001111 1121
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
..+.+.+|+|+++++++..+ ...|+++++.+|..
T Consensus 233 --------~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 233 --------GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp --------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred --------CCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence 13567899999998887532 23589999987753
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-13 Score=126.69 Aligned_cols=197 Identities=11% Similarity=0.006 Sum_probs=132.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|+++++++++.+ . ++|+|
T Consensus 61 IG~aia~~la~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~l 132 (294)
T 3r3s_A 61 IGRAAAIAYAR------EGADVAINYLPAEEEDAQQVKALIEECGRKAV-LLPGDLSDESFARSLVHKAREALG-GLDIL 132 (294)
T ss_dssp HHHHHHHHHHH------TTCEEEEECCGGGHHHHHHHHHHHHHTTCCEE-ECCCCTTSHHHHHHHHHHHHHHHT-CCCEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcchhHHHHHHHHHHHcCCcEE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 79999999999 999999998863210 00135688 9999999999888777532 2 27999
Q ss_pred EEeeeecC--C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 69 FWVMFQRL--K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 69 ~h~A~~~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
+|+|+... . +.+..+++|+.|+.++++++...++ .-.+||++||...|...
T Consensus 133 v~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~---~~g~Iv~isS~~~~~~~---------------- 193 (294)
T 3r3s_A 133 ALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLP---KGASIITTSSIQAYQPS---------------- 193 (294)
T ss_dssp EECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCC---TTCEEEEECCGGGTSCC----------------
T ss_pred EECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhh---cCCEEEEECChhhccCC----------------
Confidence 99998532 1 2345789999999999999987632 12489999998765421
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCC-CcchhHHHHHHHHHHHhhcCCCeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+ ....|+.+|...+ ...|+.+.+++|+.|+++... ...... . + ...
T Consensus 194 --------~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~----~---~-~~~------ 250 (294)
T 3r3s_A 194 --------P-HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQD----K---I-PQF------ 250 (294)
T ss_dssp --------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGG----G---S-TTT------
T ss_pred --------C-CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHH----H---H-HHH------
Confidence 1 1345888776443 345899999999999986310 000000 0 0 000
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
... .-...+.+.+|+|+++++++... ...|++++|.+|..+
T Consensus 251 -~~~---~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 251 -GQQ---TPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp -TTT---STTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred -Hhc---CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 000 01223556788999988887533 235999999888754
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.4e-13 Score=122.55 Aligned_cols=184 Identities=11% Similarity=0.013 Sum_probs=130.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRL- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~- 76 (360)
||++|+++|++ +|++|++++|+.... .-. .+.+|++|.+++.++++.+ . .+|+|+|+|+...
T Consensus 34 IG~~la~~l~~------~G~~V~~~~r~~~~~-----~~~-~~~~d~~d~~~v~~~~~~~~~~~g-~iD~li~~Ag~~~~ 100 (251)
T 3orf_A 34 LGAEVVKFFKS------KSWNTISIDFRENPN-----ADH-SFTIKDSGEEEIKSVIEKINSKSI-KVDTFVCAAGGWSG 100 (251)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCCTT-----SSE-EEECSCSSHHHHHHHHHHHHTTTC-CEEEEEECCCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcccc-----ccc-ceEEEeCCHHHHHHHHHHHHHHcC-CCCEEEECCccCCC
Confidence 79999999999 899999999987542 224 6889999999988877653 2 3899999998521
Q ss_pred -----C----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 77 -----K----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 77 -----~----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
. +.+..+++|+.|+.++++++...++ .-.+||++||...+... +
T Consensus 101 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~~------------------------~ 153 (251)
T 3orf_A 101 GNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLN---QGGLFVLTGASAALNRT------------------------S 153 (251)
T ss_dssp BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCGGGGSCC------------------------T
T ss_pred CCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhc---cCCEEEEEechhhccCC------------------------C
Confidence 1 2345789999999999999987632 12489999987654210 1
Q ss_pred CCCCcHHHHHHHHh--------c----CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 148 FPNFYYAVEDIAAS--------Y----SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e--------~----~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
+...|+.+|...+ + ..++.+.+++|+.|..+.. . +.....
T Consensus 154 -~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-------~---------~~~~~~----------- 205 (251)
T 3orf_A 154 -GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN-------R---------KYMSDA----------- 205 (251)
T ss_dssp -TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-------H---------HHCTTS-----------
T ss_pred -CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-------h---------hhcccc-----------
Confidence 2445888887554 2 4689999999998866310 0 001110
Q ss_pred ccccccCHHHHHHHHHHHHcC---CCCCCCceeccCCCccc
Q 037566 216 HFCDMSDSRVLAEQQIWAATT---DRAKNQAFNCTNGDVFT 253 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~---~~~~g~~yni~~g~~~s 253 (360)
....+.+.+|+|+++++++.. ....|+.+++.+|+..+
T Consensus 206 ~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~~ 246 (251)
T 3orf_A 206 NFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKVT 246 (251)
T ss_dssp CGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTEE
T ss_pred cccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCccc
Confidence 123466789999999998876 33469999998877543
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.49 E-value=3.1e-13 Score=123.01 Aligned_cols=200 Identities=10% Similarity=0.056 Sum_probs=133.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|.++++++++.+ . ++|+||
T Consensus 37 IG~~~a~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~id~li 108 (269)
T 3gk3_A 37 LGAAISRRLHD------AGMAVAVSHSERNDHVSTWLMHERDAGRDFK-AYAVDVADFESCERCAEKVLADFG-KVDVLI 108 (269)
T ss_dssp HHHHHHHHHHT------TTCEEEEEECSCHHHHHHHHHHHHTTTCCCE-EEECCTTCHHHHHHHHHHHHHHHS-CCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCchHHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 899999998554221 01235688 9999999999988877643 1 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 109 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 169 (269)
T 3gk3_A 109 NNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNIGSVNGSRGA------------------ 169 (269)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCC------------------
T ss_pred ECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEeCChhhccCC------------------
Confidence 99985321 234578999999999999986532111 45789999987654210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|..+........ . . .. . ....
T Consensus 170 ------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-----~---~---~~-~-~~~~- 228 (269)
T 3gk3_A 170 ------F-GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD-----V---L---EA-K-ILPQ- 228 (269)
T ss_dssp ------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------------C-C-SGGG-
T ss_pred ------C-CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh-----H---H---HH-H-hhhc-
Confidence 0 2345888876433 34689999999999987643221100 0 0 00 0 0000
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCccc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 253 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~s 253 (360)
.....+.+.+|+|+++++++..+. ..|++++|.+|..+|
T Consensus 229 ----~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 229 ----IPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp ----CTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred ----CCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence 012345679999999998876443 359999998887654
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.49 E-value=9.3e-14 Score=125.64 Aligned_cols=204 Identities=11% Similarity=-0.030 Sum_probs=136.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ . ++|+++|+|+
T Consensus 20 IG~a~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg 91 (255)
T 4eso_A 20 MGLATVRRLVE------GGAEVLLTGRNESNIARIREEFGPRVH-ALRSDIADLNEIAVLGAAAGQTLG-AIDLLHINAG 91 (255)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHGGGEE-EEECCTTCHHHHHHHHHHHHHHHS-SEEEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhCCcce-EEEccCCCHHHHHHHHHHHHHHhC-CCCEEEECCC
Confidence 79999999999 9999999999753210 0124678 9999999999888776532 2 2899999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++++++...++ .-.+||++||...+...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~---------------------- 146 (255)
T 4eso_A 92 VSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIR---EGGSIVFTSSVADEGGH---------------------- 146 (255)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEECCGGGSSBC----------------------
T ss_pred CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh---cCCEEEEECChhhcCCC----------------------
Confidence 5321 2345789999999999999987532 12589999997655310
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
| +...|+.+|...+ ...|+.+..++|+.|..|.... .......-....... ...|+
T Consensus 147 --~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~p~-------- 213 (255)
T 4eso_A 147 --P-GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGD--NITPM-------- 213 (255)
T ss_dssp --T-TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHH--HHSTT--------
T ss_pred --C-CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHh--ccCCC--------
Confidence 1 2445888776443 3458999999999999875321 111110000011111 11121
Q ss_pred ccccccccCHHHHHHHHHHHHcC-CCCCCCceeccCCCcccHH
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATT-DRAKNQAFNCTNGDVFTWK 255 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~-~~~~g~~yni~~g~~~s~~ 255 (360)
..+.+.+|+|+++++++.. ....|++++|.+|...++.
T Consensus 214 ----~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~ 252 (255)
T 4eso_A 214 ----KRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLS 252 (255)
T ss_dssp ----SSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred ----CCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCc
Confidence 2345788999999888754 2235999999888776654
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.8e-13 Score=121.78 Aligned_cols=193 Identities=18% Similarity=0.108 Sum_probs=129.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~~ 77 (360)
||++++++|++ +|++|++++|++... ..+. .+.+|++|++++.++++.+ . ++|+|+|+|+....
T Consensus 27 IG~~ia~~l~~------~G~~V~~~~r~~~~~----~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~lv~~Ag~~~~ 94 (247)
T 1uzm_A 27 IGLAIAQRLAA------DGHKVAVTHRGSGAP----KGLF-GVEVDVTDSDAVDRAFTAVEEHQG-PVEVLVSNAGLSAD 94 (247)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSSCCC----TTSE-EEECCTTCHHHHHHHHHHHHHHHS-SCSEEEEECSCCC-
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChHHH----HHhc-CeeccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCC
Confidence 79999999999 899999999976432 3345 6899999999988877643 2 27999999985321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.|+.++++++...++.. +..+||++||...+... +
T Consensus 95 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------------~- 148 (247)
T 1uzm_A 95 AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSVSGLWGI------------------------G- 148 (247)
T ss_dssp ----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCCC------------------------------
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEECCHhhccCC------------------------C-
Confidence 235678999999999999987643212 46899999987543210 0
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
+...|+.+|...+ ...|+.+.+++|+.|.++....... .....+. ...| ..
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~~~~~~--~~~p------------~~ 209 (247)
T 1uzm_A 149 NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE-----RIQQGAL--QFIP------------AK 209 (247)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH-----HHHHHHG--GGCT------------TC
T ss_pred CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCH-----HHHHHHH--hcCC------------CC
Confidence 1335888776433 3468999999999997652111000 0000010 1111 12
Q ss_pred cccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 219 DMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
.+.+.+|+|+++++++..+ ...|+.+++.+|..
T Consensus 210 ~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~ 244 (247)
T 1uzm_A 210 RVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMG 244 (247)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCcCHHHHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence 3568999999999887542 23589999987754
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=2.2e-13 Score=124.79 Aligned_cols=206 Identities=11% Similarity=0.057 Sum_probs=133.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCC---CceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSS---HVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~---~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
||++++++|++ +|++|++++|++... . .... ++. ++.+|++|+++++++++.+ . ++|+
T Consensus 18 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~ 89 (280)
T 1xkq_A 18 IGRTTAILFAQ------EGANVTITGRSSERLEETRQIILKSGVSEKQVN-SVVADVTTEDGQDQIINSTLKQFG-KIDV 89 (280)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceE-EEEecCCCHHHHHHHHHHHHHhcC-CCCE
Confidence 79999999999 899999999975321 0 0112 678 9999999999988877642 1 2799
Q ss_pred EEEeeeecCC-------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCC
Q 037566 68 LFWVMFQRLK-------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIG 134 (360)
Q Consensus 68 V~h~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~ 134 (360)
|||+|+.... +.+..+++|+.|+.++++++...++.. + .+||++||...+..
T Consensus 90 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~------------- 154 (280)
T 1xkq_A 90 LVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-K-GEIVNVSSIVAGPQ------------- 154 (280)
T ss_dssp EEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCGGGSSS-------------
T ss_pred EEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC-C-CcEEEecCccccCC-------------
Confidence 9999985321 134578999999999999987643211 3 79999999765431
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcc-hhHHHHHHHHHHHhhcCC
Q 037566 135 HDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLN-NSLLTLAVYATICRHQGL 203 (360)
Q Consensus 135 ~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~-~~~~~~~~~~~~~~~~~~ 203 (360)
. . + +...|+.+|...+ ...|+.+.+++|+.|++|...... ............. ....
T Consensus 155 -~------~---~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~ 222 (280)
T 1xkq_A 155 -A------Q---P-DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMA-SHKE 222 (280)
T ss_dssp -C------C---C-SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHH-HCTT
T ss_pred -C------C---C-cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHH-HHHc
Confidence 0 0 1 2445888776544 356899999999999986321110 0000000000111 1111
Q ss_pred CeeeeCCcccccccccccCHHHHHHHHHHHHcCC---CCCCCceeccCCCcc
Q 037566 204 PFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD---RAKNQAFNCTNGDVF 252 (360)
Q Consensus 204 ~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~---~~~g~~yni~~g~~~ 252 (360)
..+ ...+.+.+|+|+++++++..+ ...|++|++.+|..+
T Consensus 223 ~~p----------~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~ 264 (280)
T 1xkq_A 223 CIP----------IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 264 (280)
T ss_dssp TCT----------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred CCC----------CCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence 111 123578999999999887533 245899999877543
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=7.4e-14 Score=129.17 Aligned_cols=217 Identities=10% Similarity=0.024 Sum_probs=139.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCC---CceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSS---HVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~---~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
||++++++|++ +|++|++++|++... .. ... ++. ++.+|++|++++.++++.+ . ++|.
T Consensus 38 IG~aia~~L~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~ 109 (297)
T 1xhl_A 38 IGRSAAVIFAK------EGAQVTITGRNEDRLEETKQQILKAGVPAEKIN-AVVADVTEASGQDDIINTTLAKFG-KIDI 109 (297)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEE-EEecCCCCHHHHHHHHHHHHHhcC-CCCE
Confidence 79999999999 899999999975321 00 012 678 8999999999988877632 1 1799
Q ss_pred EEEeeeecCC-----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 68 LFWVMFQRLK-----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 68 V~h~A~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
|||+|+.... +.+..+++|+.|+.++++++...++.. + .+||++||...+.. .
T Consensus 110 lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~-g~IV~isS~~~~~~--------------~ 173 (297)
T 1xhl_A 110 LVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-K-GEIVNVSSIVAGPQ--------------A 173 (297)
T ss_dssp EEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-T-CEEEEECCGGGSSS--------------C
T ss_pred EEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-C-CEEEEEcCchhccC--------------C
Confidence 9999985321 234578999999999999987753212 3 69999998765431 0
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcc-hhHHHHHHHHHHHhhcCCCe
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLN-NSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~-~~~~~~~~~~~~~~~~~~~~ 205 (360)
.+ +...|+.+|...+ ...|+.+.++||+.|.++...... ............ .......
T Consensus 174 ---------~~-~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 242 (297)
T 1xhl_A 174 ---------HS-GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFI-GSRKECI 242 (297)
T ss_dssp ---------CT-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHH-HHCTTTC
T ss_pred ---------CC-CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHH-HHHHhcC
Confidence 01 2345888776543 346899999999999886321110 000000000001 1111111
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCC---CCCCCceeccCCCcccHHHHHHHHHH
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD---RAKNQAFNCTNGDVFTWKSLWKLLSE 263 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~---~~~g~~yni~~g~~~s~~el~~~ia~ 263 (360)
+ ...+.+.+|+|+++++++..+ ...|++|++.+|....+.+....+.+
T Consensus 243 p----------~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~ 293 (297)
T 1xhl_A 243 P----------VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS 293 (297)
T ss_dssp T----------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred C----------CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence 1 123567899999999887533 34589999988876665554433333
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.48 E-value=4.2e-14 Score=129.53 Aligned_cols=205 Identities=10% Similarity=-0.042 Sum_probs=134.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
.||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ . ++|+|+|+|
T Consensus 40 gIG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lvnnA 111 (277)
T 3gvc_A 40 GIGLAVARRLAD------EGCHVLCADIDGDAADAAATKIGCGAA-ACRVDVSDEQQIIAMVDACVAAFG-GVDKLVANA 111 (277)
T ss_dssp THHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHCSSCE-EEECCTTCHHHHHHHHHHHHHHHS-SCCEEEECC
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHcCCcce-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 389999999999 8999999998753210 0134678 9999999999988877643 2 279999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +.+..+++|+.|+.++++++...++.. +-.+||++||...+..
T Consensus 112 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~---------------------- 168 (277)
T 3gvc_A 112 GVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-GGGAIVNLSSLAGQVA---------------------- 168 (277)
T ss_dssp CCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSC----------------------
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhccC----------------------
Confidence 85321 234578999999999999987643211 3468999998754321
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
.+ +...|+.+|...+ ...|+.+.+++|+.|++|........ ...... ......
T Consensus 169 --~~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-------------~~~~~~-~~~~~~ 231 (277)
T 3gvc_A 169 --VG-GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAM-------------FDGALG-AGGARS 231 (277)
T ss_dssp --CT-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC-------------C-------CCHHH
T ss_pred --CC-CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhc-------------chhhHH-HHhhhh
Confidence 01 2445888876443 34689999999999988631100000 000000 000000
Q ss_pred --ccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 214 --WEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 214 --~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
......+.+.+|+|+++++++... ...|++++|.+|...+
T Consensus 232 ~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 232 MIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp HHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred hhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence 001124567999999999887532 2459999998886554
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.2e-13 Score=125.12 Aligned_cols=205 Identities=11% Similarity=-0.018 Sum_probs=127.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|.++++++++.+ . ++|+|+|+|+
T Consensus 21 IG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~li~~Ag 92 (261)
T 3n74_A 21 FGEGMAKRFAK------GGAKVVIVDRDKAGAERVAGEIGDAAL-AVAADISKEADVDAAVEAALSKFG-KVDILVNNAG 92 (261)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCTTEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHhCCceE-EEEecCCCHHHHHHHHHHHHHhcC-CCCEEEECCc
Confidence 79999999999 8999999999753210 0134688 9999999999988877643 1 1799999998
Q ss_pred ecC-C---------ChhHhhhhhHHHHHHHHHHHHhhccCC---CCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 74 QRL-K---------SEEINISNNSTMFKNVMSVVVDSNKGR---SRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 74 ~~~-~---------~~~~~~~vNv~gt~nll~a~~~~~~~~---~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
... . +.+..+++|+.|+.++++++...++.. .+..+||++||...+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------------- 153 (261)
T 3n74_A 93 IGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP------------------- 153 (261)
T ss_dssp CCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC-------------------
T ss_pred cCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC-------------------
Confidence 532 1 233578999999999999987653200 01346999988754421
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.| ....|+.+|...+ ...++.+..++|+.|.++.....+.... ....+ . + ..
T Consensus 154 -----~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-----~~~~~----~--~-~~ 215 (261)
T 3n74_A 154 -----RP-NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDS-----EEIRK----K--F-RD 215 (261)
T ss_dssp -----CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------------
T ss_pred -----CC-CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCc-----HHHHH----H--H-hh
Confidence 01 1345888776443 3468999999999998874322111000 00000 0 0 00
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccH
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTW 254 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~ 254 (360)
. .....+.+.+|+|+++++++... ...|++++|.+|..++-
T Consensus 216 ~---~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 216 S---IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp ----CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred c---CCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence 0 02235678999999999887432 23599999998877653
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=2.9e-13 Score=123.64 Aligned_cols=200 Identities=11% Similarity=0.018 Sum_probs=131.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHcc---CCCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSS---ISQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~---~~~~v~~V~h~A 72 (360)
||++++++|++ +|++|++++|..... .....+++ ++.+|++|.+++.++.+. .. ++|+|+|+|
T Consensus 43 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~g-~iD~lv~nA 114 (273)
T 3uf0_A 43 IGRAIAHGYAR------AGAHVLAWGRTDGVKEVADEIADGGGSAE-AVVADLADLEGAANVAEELAATR-RVDVLVNNA 114 (273)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSTHHHHHHHHHHTTTCEEE-EEECCTTCHHHHHHHHHHHHHHS-CCCEEEECC
T ss_pred HHHHHHHHHHH------CCCEEEEEcCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHhcC-CCcEEEECC
Confidence 79999999999 999999999754210 01235678 999999999887766432 12 279999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 115 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~--------------------- 172 (273)
T 3uf0_A 115 GIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-GSGRIVTIASMLSFQGG--------------------- 172 (273)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC---------------------
T ss_pred CCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchHhcCCC---------------------
Confidence 85321 234578999999999999885432211 45789999997654310
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|++|.......... ....+.+ ..|+
T Consensus 173 ---~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p~-------- 235 (273)
T 3uf0_A 173 ---R-NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDE---RAAEITA--RIPA-------- 235 (273)
T ss_dssp ---S-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHH---HHHHHHH--HSTT--------
T ss_pred ---C-CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHH---HHHHHHh--cCCC--------
Confidence 1 1345888776443 3468999999999999874321100000 0011111 1121
Q ss_pred ccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
..+.+.+|+|+++++++... ...|++++|.+|..+
T Consensus 236 ----~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 236 ----GRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp ----SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ----CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence 23456788999988887542 345999999888654
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=2.3e-13 Score=121.72 Aligned_cols=187 Identities=10% Similarity=-0.019 Sum_probs=128.5
Q ss_pred chHHHHHHHhcCCCCCCCCc-------EEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccC----CC
Q 037566 2 AGLSLAEALKNNPTIPGGPW-------KVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSI----SQ 63 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~-------~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~ 63 (360)
||++++++|++ +|+ +|++++|++.... ....+++ ++.+|++|++++.++++.+ .
T Consensus 14 iG~~la~~l~~------~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g- 85 (244)
T 2bd0_A 14 IGRAIALEFAR------AARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD-TITADISDMADVRRLTTHIVERYG- 85 (244)
T ss_dssp HHHHHHHHHHH------HTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEE-EEECCTTSHHHHHHHHHHHHHHTS-
T ss_pred HHHHHHHHHHH------hcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeee-EEEecCCCHHHHHHHHHHHHHhCC-
Confidence 79999999999 899 9999998743210 0134678 9999999999988877632 2
Q ss_pred CccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCC
Q 037566 64 EVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIG 134 (360)
Q Consensus 64 ~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~ 134 (360)
++|+|+|+|+.... +.+..+++|+.|+.++++++...++. .+..+||++||...|...
T Consensus 86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~------------ 152 (244)
T 2bd0_A 86 HIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMER-QHSGHIFFITSVAATKAF------------ 152 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGTSCC------------
T ss_pred CCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-CCCCEEEEEecchhcCCC------------
Confidence 27999999985321 23457899999999999998653210 146799999998665310
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCC
Q 037566 135 HDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLP 204 (360)
Q Consensus 135 ~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (360)
+ +...|+.+|...+ ...+++++++||+.|++|..... . ..
T Consensus 153 ------------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~----------------~~ 202 (244)
T 2bd0_A 153 ------------R-HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-D----------------DE 202 (244)
T ss_dssp ------------T-TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-C----------------ST
T ss_pred ------------C-CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc-c----------------cc
Confidence 1 2345888776543 35689999999999999743210 0 00
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCCCC--CCCceeccCCC
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRA--KNQAFNCTNGD 250 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~--~g~~yni~~g~ 250 (360)
. ...+.+.+|+|+++++++..+.. .|+++....+.
T Consensus 203 ------~-----~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~ 239 (244)
T 2bd0_A 203 ------M-----QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSG 239 (244)
T ss_dssp ------T-----GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTC
T ss_pred ------c-----cccCCCHHHHHHHHHHHHhCCccccchheEEecccc
Confidence 0 01467899999999998865432 25555444433
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.3e-14 Score=129.77 Aligned_cols=197 Identities=12% Similarity=0.026 Sum_probs=133.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|+++++++++.+ . .+|+|+
T Consensus 59 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv 130 (291)
T 3ijr_A 59 IGRAVSIAFAK------EGANIAIAYLDEEGDANETKQYVEKEGVKCV-LLPGDLSDEQHCKDIVQETVRQLG-SLNILV 130 (291)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHTTTCCEE-EEESCTTSHHHHHHHHHHHHHHHS-SCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCchHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 999999999875321 01235688 9999999999988877643 2 279999
Q ss_pred EeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+.... +.+..+++|+.|+.++++++...++ .-.+||++||...|...
T Consensus 131 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~~----------------- 190 (291)
T 3ijr_A 131 NNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLK---QGDVIINTASIVAYEGN----------------- 190 (291)
T ss_dssp ECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCC---TTCEEEEECCTHHHHCC-----------------
T ss_pred ECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---hCCEEEEEechHhcCCC-----------------
Confidence 99985321 2346789999999999999987642 23589999998766421
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|++|......... .... .....
T Consensus 191 -------~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-------~~~~-~~~~~---- 250 (291)
T 3ijr_A 191 -------E-TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEK-------KVSQ-FGSNV---- 250 (291)
T ss_dssp -------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHH-------HHHH-TTTTS----
T ss_pred -------C-CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHH-------HHHH-HHccC----
Confidence 0 1345888776544 345899999999999886321100000 0000 11111
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
....+.+.+|+|+++++++... ...|++++|.+|..+
T Consensus 251 ------p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 251 ------PMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIV 289 (291)
T ss_dssp ------TTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred ------CCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence 1223556888999998887543 245999999877643
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.47 E-value=7e-13 Score=120.02 Aligned_cols=202 Identities=11% Similarity=0.031 Sum_probs=129.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C----CCCCceeeEeeccCChHHHHHHHccCCC--CccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F----PSSHVDHYITFDALDSTDTTQKLSSISQ--EVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~----~~~~v~~~v~gDl~d~~~l~~~l~~~~~--~v~~V~h 70 (360)
||++++++|++ +|++|++++|++.... . ...++. ++.+|++|++++.++++.+.. ++|+|||
T Consensus 19 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~gid~lv~ 91 (260)
T 2z1n_A 19 LGFASALELAR------NGARLLLFSRNREKLEAAASRIASLVSGAQVD-IVAGDIREPGDIDRLFEKARDLGGADILVY 91 (260)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEE-EEECCTTCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEE-EEEccCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 79999999999 8999999999753210 0 012688 899999999998888762200 1689999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 92 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------- 151 (260)
T 2z1n_A 92 STGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-GWGRMVYIGSVTLLRPW------------------- 151 (260)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC-------------------
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhcCCC-------------------
Confidence 9985321 234578999999988888776432211 46899999998665310
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchh-----HHHHHH-HHHHHhhcCCCe
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNS-----LLTLAV-YATICRHQGLPF 205 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~-----~~~~~~-~~~~~~~~~~~~ 205 (360)
+ +...|+.+|...+ ...|+.+.++||+.|+++........ ...-.. ...+. ...
T Consensus 152 -----~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-- 221 (260)
T 2z1n_A 152 -----Q-DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMA--SRI-- 221 (260)
T ss_dssp -----T-TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-------------------------CC--
T ss_pred -----C-CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHH--hcC--
Confidence 1 1345777665433 34589999999999999753210000 000000 00000 000
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
....+.+.+|+|+++++++..+ ...|+.+++.+|.
T Consensus 222 ----------p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 222 ----------PMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp ----------TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred ----------CCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 1123568999999999887542 2358999997764
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-13 Score=124.08 Aligned_cols=203 Identities=11% Similarity=0.022 Sum_probs=133.8
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+++
T Consensus 22 gIG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv 93 (264)
T 3ucx_A 22 ALGTTLARRCAE------QGADLVLAARTVERLEDVAKQVTDTGRRAL-SVGTDITDDAQVAHLVDETMKAYG-RVDVVI 93 (264)
T ss_dssp THHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHTS-CCSEEE
T ss_pred HHHHHHHHHHHH------CcCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCcEEE
Confidence 389999999999 999999999974321 00135688 9999999999988877643 2 279999
Q ss_pred Eeeeec-CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQR-LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~-~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+.. .. +.+..+++|+.|+.++++++...++.. + .+||++||...+...
T Consensus 94 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~~----------------- 154 (264)
T 3ucx_A 94 NNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES-K-GAVVNVNSMVVRHSQ----------------- 154 (264)
T ss_dssp ECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-T-CEEEEECCGGGGCCC-----------------
T ss_pred ECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C-CEEEEECcchhccCC-----------------
Confidence 999752 11 234578999999999999987643211 2 589999987654210
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHH------HHHHHHHHHhhcCC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLL------TLAVYATICRHQGL 203 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~------~~~~~~~~~~~~~~ 203 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|++|.......... .-..+..+. .+.
T Consensus 155 -------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 224 (264)
T 3ucx_A 155 -------A-KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAA--AGS 224 (264)
T ss_dssp -------T-TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHH--TTS
T ss_pred -------C-ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHh--ccC
Confidence 1 1345888775443 3578999999999998864211100000 000000000 111
Q ss_pred CeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 204 PFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 204 ~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
....+.+.+|+|+++++++... ...|++++|.+|..+
T Consensus 225 ------------p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 263 (264)
T 3ucx_A 225 ------------DLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEYK 263 (264)
T ss_dssp ------------SSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred ------------CcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence 1234667899999999887532 245999999888643
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.47 E-value=7.1e-13 Score=119.71 Aligned_cols=193 Identities=18% Similarity=0.135 Sum_probs=129.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRL- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~- 76 (360)
||++++++|++ +|++|++++|++... ..+. ++.+|++|+++++++++.+ . ++|+|+|+|+...
T Consensus 33 IG~aia~~l~~------~G~~V~~~~r~~~~~----~~~~-~~~~Dl~d~~~v~~~~~~~~~~~g-~iD~lv~nAg~~~~ 100 (253)
T 2nm0_A 33 IGLAIARAFAD------AGDKVAITYRSGEPP----EGFL-AVKCDITDTEQVEQAYKEIEETHG-PVEVLIANAGVTKD 100 (253)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSSCCC----TTSE-EEECCTTSHHHHHHHHHHHHHHTC-SCSEEEEECSCCTT
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChHhh----ccce-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCC
Confidence 79999999999 899999999976432 3478 9999999999988877643 2 2799999998532
Q ss_pred --------CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 77 --------KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 77 --------~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
.+.+..+++|+.|+.++++++...++.. +..+||++||...+... +
T Consensus 101 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~------------------------~- 154 (253)
T 2nm0_A 101 QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLISSVVGLLGS------------------------A- 154 (253)
T ss_dssp TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCCCCCCCH------------------------H-
T ss_pred CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCCCC------------------------C-
Confidence 2455688999999999999886543211 45799999987543210 0
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
+...|+.+|...+ ...++.+.+++|+.|..+........ ....+. ...| ..
T Consensus 155 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-----~~~~~~--~~~p------------~~ 215 (253)
T 2nm0_A 155 GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDE-----QRANIV--SQVP------------LG 215 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--------------CHHHHH--TTCT------------TC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHH-----HHHHHH--hcCC------------CC
Confidence 1335887776433 35689999999998876532110000 000010 1111 11
Q ss_pred cccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 219 DMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
.+.+.+|+|+++++++..+ ...|+.+++.+|..
T Consensus 216 ~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~ 250 (253)
T 2nm0_A 216 RYARPEEIAATVRFLASDDASYITGAVIPVDGGLG 250 (253)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCcCHHHHHHHHHHHhCccccCCcCcEEEECCccc
Confidence 3567899999999887543 23589999877754
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.47 E-value=6.3e-14 Score=127.95 Aligned_cols=201 Identities=10% Similarity=0.055 Sum_probs=132.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 38 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv~ 109 (271)
T 4ibo_A 38 LGRAMAEGLAV------AGARILINGTDPSRVAQTVQEFRNVGHDAE-AVAFDVTSESEIIEAFARLDEQGI-DVDILVN 109 (271)
T ss_dssp HHHHHHHHHHH------TTCEEEECCSCHHHHHHHHHHHHHTTCCEE-ECCCCTTCHHHHHHHHHHHHHHTC-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHCC-CCCEEEE
Confidence 79999999999 999999999875321 0 0135688 9999999999988877643 1 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 110 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iV~isS~~~~~~~------------------- 169 (271)
T 4ibo_A 110 NAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-GYGKIVNIGSLTSELAR------------------- 169 (271)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSBC-------------------
T ss_pred CCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhCCCC-------------------
Confidence 9985321 234578999999999998887643211 34689999986543210
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
.+...|+.+|...+ ...|+.+..++|+.|..+......... .....+.+ ..|+
T Consensus 170 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~--~~p~------ 232 (271)
T 4ibo_A 170 ------ATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNP---EFDAWVKA--RTPA------ 232 (271)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCH---HHHHHHHH--HSTT------
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCH---HHHHHHHh--cCCC------
Confidence 12345888775443 346899999999999876321110000 01111111 1221
Q ss_pred ccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
..+.+.+|+|+++++++... ...|++++|.+|...+
T Consensus 233 ------~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 233 ------KRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp ------CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred ------CCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeecc
Confidence 12445778888888877532 2359999998886543
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.46 E-value=3.4e-13 Score=123.36 Aligned_cols=199 Identities=11% Similarity=-0.025 Sum_probs=132.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|+++++++++.+ . ++|+|+|
T Consensus 44 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~g-~iD~lvn 115 (276)
T 3r1i_A 44 IGKKVALAYAE------AGAQVAVAARHSDALQVVADEIAGVGGKAL-PIRCDVTQPDQVRGMLDQMTGELG-GIDIAVC 115 (276)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSGGGGHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHHHHHHHS-CCSEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 8999999999754310 0134678 8999999999988887743 1 1799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++....-.+||++||...+.. ..
T Consensus 116 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~--------------~~---- 177 (276)
T 3r1i_A 116 NAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII--------------NI---- 177 (276)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--------------CC----
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc--------------CC----
Confidence 9985321 23446789999999999998764321111368999988754421 00
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+.+...|+.+|...+ ...++.+..++|+.|..+........ ..... ...|+
T Consensus 178 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~------~~~~~--~~~p~------ 238 (276)
T 3r1i_A 178 -----PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY------HALWE--PKIPL------ 238 (276)
T ss_dssp -----SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG------HHHHG--GGSTT------
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH------HHHHH--hcCCC------
Confidence 112445888876544 34689999999999988643221111 00110 11221
Q ss_pred ccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
..+.+.+|+|+++++++... ...|++++|.+|..
T Consensus 239 ------~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 239 ------GRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT 274 (276)
T ss_dssp ------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred ------CCCcCHHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence 12456778899888887532 23589999977653
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.2e-13 Score=122.10 Aligned_cols=186 Identities=12% Similarity=0.010 Sum_probs=124.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRL 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~ 76 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|.+++.++++.+ . ++|+|+|+|+...
T Consensus 28 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lvnnAg~~~ 99 (266)
T 3p19_A 28 IGEAIARRFSE------EGHPLLLLARRVERLKALNLPNTL-CAQVDVTDKYTFDTAITRAEKIYG-PADAIVNNAGMML 99 (266)
T ss_dssp HHHHHHHHHHH------TTCCEEEEESCHHHHHTTCCTTEE-EEECCTTCHHHHHHHHHHHHHHHC-SEEEEEECCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHhhcCCce-EEEecCCCHHHHHHHHHHHHHHCC-CCCEEEECCCcCC
Confidence 89999999999 899999999975321 11234678 9999999999988877633 1 2799999998532
Q ss_pred C---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 77 K---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 77 ~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
. +.+..+++|+.|+.++++++...++.. +..+||++||...|... +
T Consensus 100 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~IV~isS~~~~~~~------------------------~ 154 (266)
T 3p19_A 100 LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-NCGTIINISSIAGKKTF------------------------P 154 (266)
T ss_dssp CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCC------------------------T
T ss_pred CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhCCCC------------------------C
Confidence 1 234578999999999888876432211 45799999997654310 1
Q ss_pred CCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 148 FPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
+...|+.+|...+ ...|+.+.+++|+.|.++......... ....+. . ...| .
T Consensus 155 -~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-~~~~~~---~-~~~~------------~ 216 (266)
T 3p19_A 155 -DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQ-IKDGYD---A-WRVD------------M 216 (266)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHH-HHHHHH---H-HHHH------------T
T ss_pred -CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchh-hhHHHH---h-hccc------------c
Confidence 1345888776443 346899999999999887432211110 000110 0 0001 1
Q ss_pred ccccCHHHHHHHHHHHHcCCC
Q 037566 218 CDMSDSRVLAEQQIWAATTDR 238 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~ 238 (360)
..+.+++|+|+++++++..+.
T Consensus 217 ~r~~~pedvA~av~~l~~~~~ 237 (266)
T 3p19_A 217 GGVLAADDVARAVLFAYQQPQ 237 (266)
T ss_dssp TCCBCHHHHHHHHHHHHHSCT
T ss_pred cCCCCHHHHHHHHHHHHcCCC
Confidence 235679999999999987653
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=126.32 Aligned_cols=199 Identities=14% Similarity=0.098 Sum_probs=133.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|+++++++++.+ . .+|+|+|
T Consensus 40 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lvn 111 (270)
T 3ftp_A 40 IGRAIALELAR------RGAMVIGTATTEAGAEGIGAAFKQAGLEGR-GAVLNVNDATAVDALVESTLKEFG-ALNVLVN 111 (270)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHHHHTCCCE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEEeCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 999999999975321 0 0124677 8999999999988877633 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +-.+||++||...+...
T Consensus 112 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------- 171 (270)
T 3ftp_A 112 NAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNITSVVGSAGN------------------- 171 (270)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCC-------------------
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhCCCC-------------------
Confidence 9985321 234578999999999999987532111 34689999987654210
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|..+........ ....+. ...|
T Consensus 172 -----~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~--~~~p------- 231 (270)
T 3ftp_A 172 -----P-GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQE-----QQTALK--TQIP------- 231 (270)
T ss_dssp -----T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHH-----HHHHHH--TTCT-------
T ss_pred -----C-CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHH-----HHHHHH--hcCC-------
Confidence 1 2345888876433 34689999999999977532111110 011111 1122
Q ss_pred ccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
...+.+.+|+|+++++++... ...|++|+|.+|..+|
T Consensus 232 -----~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s 270 (270)
T 3ftp_A 232 -----LGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFMS 270 (270)
T ss_dssp -----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSCC
T ss_pred -----CCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCcccC
Confidence 123567899999999887432 2359999998886543
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.46 E-value=7.1e-13 Score=121.09 Aligned_cols=195 Identities=12% Similarity=0.008 Sum_probs=128.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|+..... . ...++. ++.+|++|++++.++++.+ . ++|+||
T Consensus 45 gIG~~la~~L~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~id~li 116 (279)
T 3ctm_A 45 GIGWAVAEAYAQ------AGADVAIWYNSHPADEKAEHLQKTYGVHSK-AYKCNISDPKSVEETISQQEKDFG-TIDVFV 116 (279)
T ss_dssp SHHHHHHHHHHH------HTCEEEEEESSSCCHHHHHHHHHHHCSCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCSEEE
T ss_pred HHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcce-EEEeecCCHHHHHHHHHHHHHHhC-CCCEEE
Confidence 489999999999 8999999999764310 0 024678 8999999999988877652 2 279999
Q ss_pred EeeeecCC-----------ChhHhhhhhHHH----HHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCC
Q 037566 70 WVMFQRLK-----------SEEINISNNSTM----FKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIG 134 (360)
Q Consensus 70 h~A~~~~~-----------~~~~~~~vNv~g----t~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~ 134 (360)
|+|+.... +....+++|+.| ++++++++.+. +..+||++||...+..
T Consensus 117 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~------------- 178 (279)
T 3ctm_A 117 ANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-----GKGSLIITSSISGKIV------------- 178 (279)
T ss_dssp ECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCCTTSCC-------------
T ss_pred ECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEECchHhccC-------------
Confidence 99985321 123578999999 55666666654 5789999998764421
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCC
Q 037566 135 HDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLP 204 (360)
Q Consensus 135 ~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (360)
. + +.+...|+.+|...+ ...+ .+.+++|+.|.++......... ...+.+ ..|
T Consensus 179 -~-------~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~~--~~p 240 (279)
T 3ctm_A 179 -N-------I--PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDM-----KAKWWQ--LTP 240 (279)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHH-----HHHHHH--HST
T ss_pred -C-------C--CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHH-----HHHHHH--hCC
Confidence 0 0 112445888876554 2356 9999999999876432111110 001111 111
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
+ ..+.+.+|+|+++++++..+ ...|++++|.+|..
T Consensus 241 ~------------~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 241 L------------GREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT 277 (279)
T ss_dssp T------------CSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred c------------cCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence 1 13566788999988887542 24589999987754
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=6.9e-13 Score=119.08 Aligned_cols=196 Identities=10% Similarity=0.034 Sum_probs=131.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~ 75 (360)
||++++++|++ +|++|++++|++... .....++. ++.+|++|++++.++++++ . ++|+|+|+|+..
T Consensus 17 iG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~lvn~Ag~~ 88 (245)
T 1uls_A 17 IGRATLELFAK------EGARLVACDIEEGPLREAAEAVGAH-PVVMDVADPASVERGFAEALAHLG-RLDGVVHYAGIT 88 (245)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHTTTCE-EEECCTTCHHHHHHHHHHHHHHHS-SCCEEEECCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHcCCE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCC
Confidence 79999999999 899999999975321 00011377 8999999999988877653 2 279999999853
Q ss_pred CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 76 LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 76 ~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
.. +.+..+++|+.|+.++++++...++.. +..+||++||...++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~------------------------- 142 (245)
T 1uls_A 89 RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTASRVYLGN------------------------- 142 (245)
T ss_dssp CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECCGGGGCC-------------------------
T ss_pred CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEccchhcCC-------------------------
Confidence 21 234578999999999999987654322 4689999998763321
Q ss_pred CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 147 PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
+ ....|+.+|...+ ...|+.+.+++|+.|..+........ ....+.+ ..|+ +
T Consensus 143 ~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~~~~~~~--~~p~---~------- 204 (245)
T 1uls_A 143 L-GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEK-----VREKAIA--ATPL---G------- 204 (245)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHH-----HHHHHHH--TCTT---C-------
T ss_pred C-CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHH-----HHHHHHh--hCCC---C-------
Confidence 0 1234777765432 34689999999999987643221111 1111111 1121 1
Q ss_pred cccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 217 FCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
.+.+.+|+|+++++++..+ ...|+.+++.+|..
T Consensus 205 --~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 205 --RAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (245)
T ss_dssp --SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred --CCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence 2457889999999887643 23589998877753
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=4.5e-13 Score=120.56 Aligned_cols=198 Identities=12% Similarity=0.001 Sum_probs=126.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCC-CCC--CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRP-PPS--WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~-~~~--~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
||++++++|++ +|++|++++|++ ... .. ...++. ++.+|++|++++.++++.+ . ++|+|||+|
T Consensus 19 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nA 90 (249)
T 2ew8_A 19 IGRAIAERFAV------EGADIAIADLVPAPEAEAAIRNLGRRVL-TVKCDVSQPGDVEAFGKQVISTFG-RCDILVNNA 90 (249)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCCHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECC
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCchhHHHHHHHhcCCcEE-EEEeecCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 79999999999 899999999986 221 00 134678 8999999999988776532 2 279999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 91 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~--------------------- 148 (249)
T 2ew8_A 91 GIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYWLKI--------------------- 148 (249)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSCC---------------------
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhccCC---------------------
Confidence 85321 234578999999999988865432111 46799999997655310
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|.++....... .. +... .. .+..
T Consensus 149 ---~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~---~~~~---~~-~~~~------ 209 (249)
T 2ew8_A 149 ---E-AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL--SA---MFDV---LP-NMLQ------ 209 (249)
T ss_dssp ---S-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------------CTTS------
T ss_pred ---C-CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccc--cc---hhhH---HH-HhhC------
Confidence 1 1345887776544 3468999999999998864220000 00 0000 00 0000
Q ss_pred ccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
....+.+.+|+|+++++++..+ ...|+.+++.+|.
T Consensus 210 --~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 210 --AIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp --SSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred --ccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence 1124678899999999887532 2358999997764
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-12 Score=117.18 Aligned_cols=199 Identities=13% Similarity=0.106 Sum_probs=131.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCC-CccEEEEeeeecCC---
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQ-EVTHLFWVMFQRLK--- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~-~v~~V~h~A~~~~~--- 77 (360)
||++++++|++ ..|+.|++++|+.... ...++ ++.+|++|++++.++++.+.. ++|+++|+|+....
T Consensus 16 IG~~~a~~l~~-----~~g~~v~~~~~~~~~~---~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~~~~ 86 (244)
T 4e4y_A 16 IGKAVVELLLQ-----NKNHTVINIDIQQSFS---AENLK-FIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILIKGSI 86 (244)
T ss_dssp HHHHHHHHHTT-----STTEEEEEEESSCCCC---CTTEE-EEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCCBCT
T ss_pred HHHHHHHHHHh-----cCCcEEEEeccccccc---cccce-EEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCCCCCc
Confidence 79999999997 1588999998876521 35678 999999999999888763311 28999999985321
Q ss_pred ------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCC
Q 037566 78 ------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNF 151 (360)
Q Consensus 78 ------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~ 151 (360)
+.+..+++|+.|+.++++++...++ .-.+||++||...|... | +..
T Consensus 87 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~---~~g~iv~~sS~~~~~~~------------------------~-~~~ 138 (244)
T 4e4y_A 87 FDIDIESIKKVLDLNVWSSIYFIKGLENNLK---VGASIVFNGSDQCFIAK------------------------P-NSF 138 (244)
T ss_dssp TTSCHHHHHHHHHHHTHHHHHHHHHTGGGEE---EEEEEEEECCGGGTCCC------------------------T-TBH
T ss_pred ccCCHHHHHHHHHHccHHHHHHHHHHHHHhc---cCcEEEEECCHHHccCC------------------------C-CCc
Confidence 2345789999999999999987632 11489999987654210 1 134
Q ss_pred cHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHH-H-----HHHHHHHhhcCCCeeeeCCccccc
Q 037566 152 YYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLT-L-----AVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 152 ~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
.|+.+|...+ ...|+.+.+++|+.|.+|........... . ...... ....
T Consensus 139 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------------ 204 (244)
T 4e4y_A 139 AYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQE--EKEF------------ 204 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHH--HTTS------------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHH--hhcC------------
Confidence 5888876544 35689999999999987632110000000 0 000000 0111
Q ss_pred ccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 216 HFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
....+.+.+|+|+++++++..+. ..|+++++.+|..
T Consensus 205 p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 205 PLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence 12346679999999999886432 3589999977753
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.6e-13 Score=122.58 Aligned_cols=197 Identities=11% Similarity=-0.023 Sum_probs=129.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|++.... ....++. ++.+|++|++++.++++.+ . ++|+|||+|+
T Consensus 17 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~iD~lv~nAg 88 (254)
T 1hdc_A 17 LGAEAARQAVA------AGARVVLADVLDEEGAATARELGDAAR-YQHLDVTIEEDWQRVVAYAREEFG-SVDGLVNNAG 88 (254)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHTTGGGEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhCCcee-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 79999999999 8999999999753210 0123577 8999999999988877632 1 1799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---------------------- 145 (254)
T 1hdc_A 89 ISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGL---------------------- 145 (254)
T ss_dssp CCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC----------------------
T ss_pred CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhccCC----------------------
Confidence 5321 234578999999987776665432211 46899999997654310
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+ +...|+.+|...+ ...++.+.++||+.|+++.... ........ +...
T Consensus 146 --~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------~~~~~~~~--~~~~---- 203 (254)
T 1hdc_A 146 --A-LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE-------------TGIRQGEG--NYPN---- 203 (254)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-------------HTCCCSTT--SCTT----
T ss_pred --C-CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc-------------cchhHHHH--HHhc----
Confidence 1 2345888776544 3468999999999998863100 00000000 0000
Q ss_pred ccccccc-CHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 215 EHFCDMS-DSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 215 ~~~~d~~-~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
.....+. +.+|+|+++++++..+ ...|+.+++.+|..
T Consensus 204 ~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 204 TPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp STTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence 0112356 8999999999887543 23589999977753
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-13 Score=129.28 Aligned_cols=213 Identities=9% Similarity=-0.016 Sum_probs=140.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCC----------CCC-----C--CCCCCceeeEeeccCChHHHHHHHccC---
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRP----------PPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI--- 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~----------~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~--- 61 (360)
||++++++|++ +|++|++++|+. ... . ....++. ++.+|++|++++.++++.+
T Consensus 39 IG~aia~~la~------~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~ 111 (322)
T 3qlj_A 39 IGRAHALAFAA------EGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAV-ADGSNVADWDQAAGLIQTAVET 111 (322)
T ss_dssp HHHHHHHHHHH------TTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEE-EECCCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------CCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHH
Confidence 79999999999 999999998861 100 0 0134577 8999999999988877633
Q ss_pred -CCCccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCC-----CccEEEEeccCccccccccCC
Q 037566 62 -SQEVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRS-----RLRHVTLLMGTKHYMGPVFDP 126 (360)
Q Consensus 62 -~~~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~-----~v~r~v~~SS~~vYg~~~~~~ 126 (360)
. .+|+|||+|+.... +.+..+++|+.|+.++++++...++... .-.+||++||...+...
T Consensus 112 ~g-~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~---- 186 (322)
T 3qlj_A 112 FG-GLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS---- 186 (322)
T ss_dssp HS-CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB----
T ss_pred cC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC----
Confidence 1 27999999985321 2345789999999999999865421000 01489999987654310
Q ss_pred cccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHH
Q 037566 127 SLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYAT 196 (360)
Q Consensus 127 ~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~ 196 (360)
+ ....|+.+|...+ ...|+.+..++|+ +..+-........
T Consensus 187 --------------------~-~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~-------- 236 (322)
T 3qlj_A 187 --------------------V-GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEM-------- 236 (322)
T ss_dssp --------------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------
T ss_pred --------------------C-CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhh--------
Confidence 0 1335888776443 3468999999998 5443221111100
Q ss_pred HHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc-----------------cHHHH
Q 037566 197 ICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF-----------------TWKSL 257 (360)
Q Consensus 197 ~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~-----------------s~~el 257 (360)
...+. ........+|+|+++++++.... ..|++|+|.+|... +..|+
T Consensus 237 ----~~~~~----------~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el 302 (322)
T 3qlj_A 237 ----MATQD----------QDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAEL 302 (322)
T ss_dssp ---------------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGH
T ss_pred ----hhccc----------cccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHH
Confidence 00000 11234567889999888875332 35999999888755 66888
Q ss_pred HHHHHHHhCCCcc
Q 037566 258 WKLLSEIFDVEFV 270 (360)
Q Consensus 258 ~~~ia~~~g~~~~ 270 (360)
.+.+.+.+|.+.+
T Consensus 303 ~~~~~~~~~~~~~ 315 (322)
T 3qlj_A 303 GPVVADLLGKARP 315 (322)
T ss_dssp HHHHHHHHHHSCC
T ss_pred HHHHHHHhhccCC
Confidence 8888888885443
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=8.2e-14 Score=125.72 Aligned_cols=200 Identities=11% Similarity=0.008 Sum_probs=130.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-C---CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-F---PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~---~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|++.... . ...++. ++.+|++|+++++++++.+ . ++|+|+|+|+
T Consensus 18 iG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~lv~~Ag 89 (253)
T 1hxh_A 18 VGLEVVKLLLG------EGAKVAFSDINEAAGQQLAAELGERSM-FVRHDVSSEADWTLVMAAVQRRLG-TLNVLVNNAG 89 (253)
T ss_dssp HHHHHHHHHHH------TTCEEEEECSCHHHHHHHHHHHCTTEE-EECCCTTCHHHHHHHHHHHHHHHC-SCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHcCCceE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 79999999999 8999999998753210 0 024678 8999999999988877653 2 2799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++.+++...++.. + .+||++||...|...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~~---------------------- 145 (253)
T 1hxh_A 90 ILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSIINMASVSSWLPI---------------------- 145 (253)
T ss_dssp CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEEEECCGGGTSCC----------------------
T ss_pred CCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEEEEEcchhhcCCC----------------------
Confidence 5321 234578999999888888776544322 4 799999997655310
Q ss_pred CCCCCCCcHHHHHHHHh----------cCC--CCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSP--AVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~--~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
+ +...|+.+|...+ ... +++++++||+.|++|......... ..... ..... ..
T Consensus 146 --~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----~~~~~--~~~~~----~~-- 210 (253)
T 1hxh_A 146 --E-QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG----VSKEM--VLHDP----KL-- 210 (253)
T ss_dssp --T-TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT----CCHHH--HBCBT----TT--
T ss_pred --C-CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchh----hhHHH--Hhhhh----cc--
Confidence 1 2345888776544 123 899999999999987321100000 00000 00000 00
Q ss_pred cccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
.....+.+.+|+|+++++++..+. ..|+.+++.+|.
T Consensus 211 --~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 211 --NRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSI 248 (253)
T ss_dssp --BTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred --CccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence 011235679999999998876432 358999997764
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-12 Score=120.06 Aligned_cols=199 Identities=8% Similarity=-0.019 Sum_probs=134.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|+|+|
T Consensus 40 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~id~li~nA 111 (280)
T 3nrc_A 40 IAYGIAKAMHR------EGAELAFTYVGQFKDRVEKLCAEFNPAA-VLPCDVISDQEIKDLFVELGKVWD-GLDAIVHSI 111 (280)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECTTCHHHHHHHHGGGCCSE-EEECCTTCHHHHHHHHHHHHHHCS-SCCEEEECC
T ss_pred HHHHHHHHHHH------cCCEEEEeeCchHHHHHHHHHHhcCCce-EEEeecCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 89999999999 899999999986210 01123578 9999999999988877653 2 279999999
Q ss_pred eecC-----------C---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 73 FQRL-----------K---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 73 ~~~~-----------~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
+... . +....+++|+.|+.++++++...++. +-.+||++||...+...
T Consensus 112 g~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~g~iv~isS~~~~~~~---------------- 173 (280)
T 3nrc_A 112 AFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKN--RNASMVALTYIGAEKAM---------------- 173 (280)
T ss_dssp CCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--TTCEEEEEECGGGTSCC----------------
T ss_pred ccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeccccccCC----------------
Confidence 8532 1 22357899999999999999875321 24689999987654210
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
+ +...|+.+|...+ ...++.+.+++|+.|..+.......... ......+ ..|+
T Consensus 174 --------~-~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p~--- 236 (280)
T 3nrc_A 174 --------P-SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKK---MLDYNAM--VSPL--- 236 (280)
T ss_dssp --------T-TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHH---HHHHHHH--HSTT---
T ss_pred --------C-CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHH---HHHHHHh--cCCC---
Confidence 1 2345888776443 3468999999999998864322111111 1111111 1121
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
..+.+.+|+|+++++++... ...|+++++.+|..+
T Consensus 237 ---------~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~ 273 (280)
T 3nrc_A 237 ---------KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHC 273 (280)
T ss_dssp ---------CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred ---------CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence 13456889999998877532 245999999887653
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.45 E-value=3.2e-13 Score=121.56 Aligned_cols=197 Identities=17% Similarity=0.143 Sum_probs=132.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... .....+. ++.+|++|+++++++++.+ . ++|+++|+|+
T Consensus 21 IG~a~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv~nAg 92 (248)
T 3op4_A 21 IGKAIAELLAE------RGAKVIGTATSESGAQAISDYLGDNGK-GMALNVTNPESIEAVLKAITDEFG-GVDILVNNAG 92 (248)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHGGGEE-EEECCTTCHHHHHHHHHHHHHHHC-CCSEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhcccce-EEEEeCCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 79999999999 9999999998753210 0123567 8999999999988887633 1 2799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~---------------------- 149 (248)
T 3op4_A 93 ITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINVGSVVGTMGN---------------------- 149 (248)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCC----------------------
T ss_pred CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcCCC----------------------
Confidence 5321 234578999999999999986532211 45689999987544210
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+ +...|+.+|...+ ...|+.+..++|+.|..+......... ..... ...|.
T Consensus 150 --~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-----~~~~~--~~~p~--------- 210 (248)
T 3op4_A 150 --A-GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQ-----RTATL--AQVPA--------- 210 (248)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHH-----HHHHH--HTCTT---------
T ss_pred --C-CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHH-----HHHHH--hcCCC---------
Confidence 1 2345888876333 346899999999999876432221110 00111 12221
Q ss_pred cccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
..+.+.+|+|+++++++... ...|++++|.+|..
T Consensus 211 ---~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~~ 246 (248)
T 3op4_A 211 ---GRLGDPREIASAVAFLASPEAAYITGETLHVNGGMY 246 (248)
T ss_dssp ---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred ---CCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCee
Confidence 23567899999998887533 23499999977753
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.6e-13 Score=123.35 Aligned_cols=201 Identities=15% Similarity=0.079 Sum_probs=131.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 36 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~id~lv~ 107 (279)
T 3sju_A 36 IGLAVARTLAA------RGIAVYGCARDAKNVSAAVDGLRAAGHDVD-GSSCDVTSTDEVHAAVAAAVERFG-PIGILVN 107 (279)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHHHHHHHHHC-SCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHHcC-CCcEEEE
Confidence 79999999999 899999999975321 01235688 9999999999988877643 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHh--hccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVD--SNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~--~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+.... +.+..+++|+.|+.++++++.. .++ ..+..+||++||...+...
T Consensus 108 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~~~g~iV~isS~~~~~~~----------------- 169 (279)
T 3sju_A 108 SAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMR-EAGWGRIVNIASTGGKQGV----------------- 169 (279)
T ss_dssp CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHH-HHTCEEEEEECCGGGTSCC-----------------
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHh-hcCCcEEEEECChhhccCC-----------------
Confidence 9985321 2345778999999999999865 111 1145699999987654210
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcc-------hhHHHHHHHHHHHhhcC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLN-------NSLLTLAVYATICRHQG 202 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~-------~~~~~~~~~~~~~~~~~ 202 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|.++...... .... -.....+. ..
T Consensus 170 -------~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~ 238 (279)
T 3sju_A 170 -------M-YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTE-QEVHERFN--AK 238 (279)
T ss_dssp -------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCH-HHHHHHHH--TT
T ss_pred -------C-CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCCh-HHHHHHHH--hc
Confidence 1 1345888876433 346899999999999875211000 0000 00000110 11
Q ss_pred CCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 203 LPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 203 ~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
.| ...+.+++|+|+++++++.... ..|++++|.+|..
T Consensus 239 ~p------------~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~ 277 (279)
T 3sju_A 239 IP------------LGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGLG 277 (279)
T ss_dssp CT------------TSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred CC------------CCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence 11 2245679999999998875432 3599999987753
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-13 Score=123.25 Aligned_cols=203 Identities=11% Similarity=-0.034 Sum_probs=131.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|++.... ....++. ++.+|++|++++.++++.+ . ++|+|
T Consensus 25 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~l 96 (267)
T 1iy8_A 25 LGRATAVRLAA------EGAKLSLVDVSSEGLEASKAAVLETAPDAEVL-TTVADVSDEAQVEAYVTATTERFG-RIDGF 96 (267)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHCTTCCEE-EEECCTTSHHHHHHHHHHHHHHHS-CCSEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhhcCCceEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 79999999999 8999999999753210 0034678 8999999999988877643 1 17999
Q ss_pred EEeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 69 FWVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 69 ~h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
+|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 97 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---------------- 159 (267)
T 1iy8_A 97 FNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIRGI---------------- 159 (267)
T ss_dssp EECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSBC----------------
T ss_pred EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhccCC----------------
Confidence 999985321 234578999999998877775432211 46799999987654210
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCc----chhHHHHHHHHHHHhhcCCC
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSL----NNSLLTLAVYATICRHQGLP 204 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~----~~~~~~~~~~~~~~~~~~~~ 204 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|+++..... ...... .....+. ...|
T Consensus 160 --------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~--~~~p 227 (267)
T 1iy8_A 160 --------G-NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPR-KAAEEFI--QVNP 227 (267)
T ss_dssp --------S-SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHH-HHHHHHH--TTCT
T ss_pred --------C-CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhh-hHHHHHh--ccCC
Confidence 1 2345887776443 34689999999999987631100 000000 0000010 1111
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
...+.+.+|+|+++++++..+ ...|+.+++.+|...+
T Consensus 228 ------------~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 228 ------------SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAA 266 (267)
T ss_dssp ------------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred ------------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence 123567899999999887543 2358999998876543
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.44 E-value=3.9e-13 Score=122.50 Aligned_cols=196 Identities=14% Similarity=0.083 Sum_probs=130.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 41 IG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~li 112 (271)
T 4iin_A 41 IGAEIAKTLAS------MGLKVWINYRSNAEVADALKNELEEKGYKAA-VIKFDAASESDFIEAIQTIVQSDG-GLSYLV 112 (271)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-SCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCCHHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHhcC-CCCEEE
Confidence 79999999999 999999999964321 0 0134788 9999999999988877633 1 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 113 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 173 (271)
T 4iin_A 113 NNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-RFGSVVNVASIIGERGN------------------ 173 (271)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCC------------------
T ss_pred ECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEEechhhcCCC------------------
Confidence 99985321 234678999999999999886532211 45789999987654210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+...|+.+|...+ ...++.+..++|+.|..+........ ... . + ..
T Consensus 174 -------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---------~~~----~--~-~~ 230 (271)
T 4iin_A 174 -------MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE---------LKA----D--Y-VK 230 (271)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------------------C-GG
T ss_pred -------CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH---------HHH----H--H-Hh
Confidence 02345888876544 35789999999999877532211000 000 0 0 00
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
. .....+.+.+|+|+++++++..+ ...|+++++.+|-
T Consensus 231 ~---~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 231 N---IPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL 269 (271)
T ss_dssp G---CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred c---CCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence 0 02234678999999999887543 2359999998775
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.2e-12 Score=117.03 Aligned_cols=198 Identities=8% Similarity=0.015 Sum_probs=134.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|+++++++++.+ . .+|+|+
T Consensus 21 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~li 92 (266)
T 3oig_A 21 IAWGIARSLHE------AGARLIFTYAGERLEKSVHELAGTLDRNDSI-ILPCDVTNDAEIETCFASIKEQVG-VIHGIA 92 (266)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSGGGHHHHHHHHHTSSSCCCE-EEECCCSSSHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEecCchHHHHHHHHHHHhcCCCCce-EEeCCCCCHHHHHHHHHHHHHHhC-CeeEEE
Confidence 89999999999 899999999874321 11123688 9999999999988877643 2 279999
Q ss_pred EeeeecC-----C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 70 WVMFQRL-----K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 70 h~A~~~~-----~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
|+|+... . +....+++|+.|+.++++++...++ .-.+||++||...+..
T Consensus 93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~g~iv~isS~~~~~~--------------- 154 (266)
T 3oig_A 93 HCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMT---EGGSIVTLTYLGGELV--------------- 154 (266)
T ss_dssp ECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT---TCEEEEEEECGGGTSC---------------
T ss_pred EccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcC---CCceEEEEeccccccc---------------
Confidence 9998532 1 2345779999999999999987642 2358999998754421
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
.| ....|+.+|...+ ...|+.+.+++|+.|..+.......... ....+.. ..|+
T Consensus 155 ---------~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~~~- 218 (266)
T 3oig_A 155 ---------MP-NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNS---ILKDIEE--RAPL- 218 (266)
T ss_dssp ---------CT-TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHH---HHHHHHH--HSTT-
T ss_pred ---------CC-CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHH---HHHHHHh--cCCC-
Confidence 01 1345888776443 3468999999999998864332211111 1111111 1121
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
..+.+.+|+|+++++++..+ ...|+++++.+|-..
T Consensus 219 -----------~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~ 255 (266)
T 3oig_A 219 -----------RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHI 255 (266)
T ss_dssp -----------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred -----------CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEE
Confidence 12456889999999887642 245999999877644
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.6e-12 Score=119.42 Aligned_cols=205 Identities=11% Similarity=-0.018 Sum_probs=133.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+++|
T Consensus 40 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lVn 111 (283)
T 3v8b_A 40 IGRATALALAA------DGVTVGALGRTRTEVEEVADEIVGAGGQAI-ALEADVSDELQMRNAVRDLVLKFG-HLDIVVA 111 (283)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHTTTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHhC-CCCEEEE
Confidence 79999999999 899999999975321 01235678 9999999999988877643 1 2799999
Q ss_pred eeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+... +
T Consensus 112 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~~---------------~-- 173 (283)
T 3v8b_A 112 NAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTRTF---------------T-- 173 (283)
T ss_dssp CCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTBC---------------C--
T ss_pred CCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcChhhccCC---------------C--
Confidence 9985311 234578999999999999985432211 45799999987544210 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.| +...|+.+|...+ ...|+.+..++|+.|..+.......... . ....+......
T Consensus 174 -----~~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-------~--~~~~~~~~~~~ 238 (283)
T 3v8b_A 174 -----TP-GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE-------E--ETAIPVEWPKG 238 (283)
T ss_dssp -----ST-TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH-------H--HHSCCCBCTTC
T ss_pred -----CC-CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccc-------h--hhhhhhhhhhh
Confidence 01 2445888776543 3468999999999998874332111000 0 00111111111
Q ss_pred ccccccc--ccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 211 KYTWEHF--CDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~--~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
. ... ..+...+|+|+++++++... ...|++++|.+|.
T Consensus 239 ~---~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 239 Q---VPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ 279 (283)
T ss_dssp S---CGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred c---CccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence 0 011 23567899999999887532 2358999997664
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-12 Score=119.83 Aligned_cols=198 Identities=8% Similarity=-0.062 Sum_probs=134.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C-CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W-FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~-~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||++++++|++ +|++|++++|+.... . .....+. ++.+|++|+++++++++.+ . .+|+|+|+
T Consensus 44 IG~~ia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lVnn 115 (296)
T 3k31_A 44 LAWGIAKAVCA------QGAEVALTYLSETFKKRVDPLAESLGVKL-TVPCDVSDAESVDNMFKVLAEEWG-SLDFVVHA 115 (296)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSGGGHHHHHHHHHHHTCCE-EEECCTTCHHHHHHHHHHHHHHHS-CCSEEEEC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChHHHHHHHHHHHhcCCeE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEEC
Confidence 79999999999 999999999975321 0 0113467 8999999999988887643 2 27999999
Q ss_pred eeecC----------C---ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 72 MFQRL----------K---SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 72 A~~~~----------~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+... . +....+++|+.|+.++++++...++ .-.+||++||...+...
T Consensus 116 AG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~---~~g~IV~isS~~~~~~~---------------- 176 (296)
T 3k31_A 116 VAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMT---NGGSILTLSYYGAEKVV---------------- 176 (296)
T ss_dssp CCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT---TCEEEEEEECGGGTSCC----------------
T ss_pred CCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCCEEEEEEehhhccCC----------------
Confidence 98532 1 2345789999999999999987642 23589999987644210
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
+ ....|+.+|...+ ...|+.+..++|+.|..+.......... ....+.+ ..|+
T Consensus 177 --------~-~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p~--- 239 (296)
T 3k31_A 177 --------P-HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHY---ILTWNKY--NSPL--- 239 (296)
T ss_dssp --------T-TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHH---HHHHHHH--HSTT---
T ss_pred --------C-CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHH---HHHHHHh--cCCC---
Confidence 1 1345888775443 3568999999999999875433211110 1111111 1221
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
..+...+|+|+++++++... ...|++++|.+|..+
T Consensus 240 ---------~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 276 (296)
T 3k31_A 240 ---------RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV 276 (296)
T ss_dssp ---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ---------CCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence 12456889999999887542 345999999888654
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-13 Score=123.39 Aligned_cols=196 Identities=15% Similarity=0.074 Sum_probs=128.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|+++++++++.+ . ++|+|+|+|+
T Consensus 39 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lvnnAg 110 (266)
T 3grp_A 39 IGEAIARCFHA------QGAIVGLHGTREDKLKEIAADLGKDVF-VFSANLSDRKSIKQLAEVAEREME-GIDILVNNAG 110 (266)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCSSEE-EEECCTTSHHHHHHHHHHHHHHHT-SCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhCCceE-EEEeecCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 79999999999 9999999998753210 0134688 9999999999988877632 2 2799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++.+++...++.. +..+||++||...+...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~Iv~isS~~~~~~~---------------------- 167 (266)
T 3grp_A 111 ITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-RYGRIINITSIVGVVGN---------------------- 167 (266)
T ss_dssp CC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCC----------------------------
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcEEEEECCHHHcCCC----------------------
Confidence 5321 345678999999888877775432111 45799999987544210
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|.++........ ....+. ...|+
T Consensus 168 --~-~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-----~~~~~~--~~~p~--------- 228 (266)
T 3grp_A 168 --P-GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEK-----QKEAIM--AMIPM--------- 228 (266)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHH-----HHHHHH--TTCTT---------
T ss_pred --C-CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHH-----HHHHHH--hcCCC---------
Confidence 1 1345888776433 34689999999999987632111111 011111 12221
Q ss_pred cccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..+.+.+|+|+++++++... ...|++++|.+|.
T Consensus 229 ---~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 229 ---KRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp ---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ---CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 23456889999999887543 2359999997775
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.43 E-value=9.1e-13 Score=118.27 Aligned_cols=196 Identities=14% Similarity=0.097 Sum_probs=129.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEec-CCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTAR-RPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r-~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++| ++... .. ...++. ++.+|++|++++.++++.+ . ++|+||
T Consensus 16 iG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~id~lv 87 (246)
T 2uvd_A 16 IGRAIAIDLAK------QGANVVVNYAGNEQKANEVVDEIKKLGSDAI-AVRADVANAEDVTNMVKQTVDVFG-QVDILV 87 (246)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 8999999998 43210 00 134678 8999999999988877632 1 179999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 88 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 148 (246)
T 2uvd_A 88 NNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-RHGRIVNIASVVGVTGN------------------ 148 (246)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCC------------------
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCHHhcCCC------------------
Confidence 99985321 234578999999888888776432211 46799999987654210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
| +...|+.+|...+ ...|+.+++++|+.|.++......... ...+. ...|+
T Consensus 149 ------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~--~~~p~----- 209 (246)
T 2uvd_A 149 ------P-GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENI-----KAEML--KLIPA----- 209 (246)
T ss_dssp ------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTH-----HHHHH--HTCTT-----
T ss_pred ------C-CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHH-----HHHHH--hcCCC-----
Confidence 1 1345887776433 346899999999999887432211111 00111 11121
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
..+.+.+|+|+++++++..+. ..|+.+++.+|.
T Consensus 210 -------~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 210 -------AQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp -------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred -------CCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence 135678999999998875422 358999997774
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=6.2e-13 Score=120.79 Aligned_cols=195 Identities=11% Similarity=-0.001 Sum_probs=131.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+ .. +|+|+|+|+
T Consensus 18 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g~-iD~lvnnAg 89 (263)
T 2a4k_A 18 IGRAALDLFAR------EGASLVAVDREERLLAEAVAALEAEAI-AVVADVSDPKAVEAVFAEALEEFGR-LHGVAHFAG 89 (263)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHTCCSSEE-EEECCTTSHHHHHHHHHHHHHHHSC-CCEEEEGGG
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhcCceE-EEEcCCCCHHHHHHHHHHHHHHcCC-CcEEEECCC
Confidence 79999999999 899999999975321 00124678 8999999999988877653 22 799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++++++...++ ...+||++||...|+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~~---------------------- 144 (263)
T 2a4k_A 90 VAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLE---EGGSLVLTGSVAGLGAF---------------------- 144 (263)
T ss_dssp GTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCC---TTCEEEEECCCTTCCHH----------------------
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCEEEEEecchhcCCC----------------------
Confidence 5321 2245789999999999999987631 14689999998766311
Q ss_pred CCCCCCCcHHHHHH--------HH-h-cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDI--------AA-S-YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~--------l~-e-~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+...|+.+|. ++ | ...|+.+.++||+.|.++........ ....+. ...|+
T Consensus 145 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~~~~~~--~~~p~--------- 204 (263)
T 2a4k_A 145 ----GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPW-----AWEQEV--GASPL--------- 204 (263)
T ss_dssp ----HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHH-----HHHHHH--HTSTT---------
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHH-----HHHHHH--hcCCC---------
Confidence 1223655443 22 2 45689999999999998753221111 111111 11221
Q ss_pred cccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
..+.+.+|+|+++++++..+ ...|+.+++.+|..+
T Consensus 205 ---~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~ 241 (263)
T 2a4k_A 205 ---GRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSI 241 (263)
T ss_dssp ---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred ---CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCccc
Confidence 12467899999999887543 235899999777643
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.7e-12 Score=118.08 Aligned_cols=205 Identities=11% Similarity=0.017 Sum_probs=134.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
||++++++|++ +|++|++++|+.... ......+. ++.+|++|++++.++++.... +|+++|+|
T Consensus 22 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~g~-id~lv~nA 93 (267)
T 3t4x_A 22 IGKAIATSLVA------EGANVLINGRREENVNETIKEIRAQYPDAILQ-PVVADLGTEQGCQDVIEKYPK-VDILINNL 93 (267)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHHHHCTTCEEE-EEECCTTSHHHHHHHHHHCCC-CSEEEECC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhhCCCceEE-EEecCCCCHHHHHHHHHhcCC-CCEEEECC
Confidence 79999999999 999999999975321 00124567 899999999999998886653 89999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 94 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~--------------------- 151 (267)
T 3t4x_A 94 GIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFIASEAAIMPS--------------------- 151 (267)
T ss_dssp CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TEEEEEEECCGGGTSCC---------------------
T ss_pred CCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEcchhhccCC---------------------
Confidence 85321 233468999999888888876543211 45799999987654210
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCc---------chhHHHHHHHHHHHhhcCCC
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSL---------NNSLLTLAVYATICRHQGLP 204 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~---------~~~~~~~~~~~~~~~~~~~~ 204 (360)
+ +...|+.+|...+ ...++.+..++|+.|..+..... ..... ......+.. .+
T Consensus 152 ---~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~ 223 (267)
T 3t4x_A 152 ---Q-EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEE---AEKRFMKEN-RP 223 (267)
T ss_dssp ---T-TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHH---HHHHHHHHH-CT
T ss_pred ---C-cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHH---HHHHHhhcc-CC
Confidence 1 2445888776544 34579999999998876521000 00000 000000000 01
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
. . ....+.+.+|+|+++++++... ...|++++|.+|...|
T Consensus 224 ~----~-----~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 224 T----S-----IIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp T----C-----SSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred c----c-----cccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 0 0 1235678899999999887532 2459999998887654
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1e-12 Score=119.37 Aligned_cols=195 Identities=13% Similarity=0.087 Sum_probs=129.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|+++.++.... .....++. ++.+|++|++++.++++.+ . .+|+|+
T Consensus 38 IG~~la~~l~~------~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~id~li 109 (267)
T 4iiu_A 38 IGRAIARQLAA------DGFNIGVHYHRDAAGAQETLNAIVANGGNGR-LLSFDVANREQCREVLEHEIAQHG-AWYGVV 109 (267)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHC-CCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCchHHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHhC-CccEEE
Confidence 79999999999 999998876553210 00235788 9999999999988877632 1 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...+....+..+||++||...+...
T Consensus 110 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------ 171 (267)
T 4iiu_A 110 SNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN------------------ 171 (267)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC------------------
T ss_pred ECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC------------------
Confidence 99985321 234678999999999999875211000145789999987654210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ +...|+.+|...+ ...++.+.+++|+.|..+..... ... ...+. ...|+
T Consensus 172 ------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~-----~~~~~--~~~p~----- 231 (267)
T 4iiu_A 172 ------R-GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-ESA-----LKEAM--SMIPM----- 231 (267)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-HHH-----HHHHH--HTCTT-----
T ss_pred ------C-CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-HHH-----HHHHH--hcCCC-----
Confidence 0 1345888876332 34589999999999998754322 110 11111 12221
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
..+.+.+|+|+++++++..+ ...|++++|.+|
T Consensus 232 -------~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 232 -------KRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp -------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -------CCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 13457899999999887542 245999999766
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.42 E-value=3e-12 Score=119.43 Aligned_cols=208 Identities=11% Similarity=0.020 Sum_probs=132.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------------------CCCCCceeeEeeccCChHHHHHHHccC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------------------FPSSHVDHYITFDALDSTDTTQKLSSI- 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------------------~~~~~v~~~v~gDl~d~~~l~~~l~~~- 61 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+
T Consensus 58 IG~aia~~la~------~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~ 130 (317)
T 3oec_A 58 QGRTHAVRLAQ------DGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRII-ARQADVRDLASLQAVVDEAL 130 (317)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------CCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHH
Confidence 79999999999 9999999987632100 0134678 8999999999988877643
Q ss_pred ---CCCccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCccc
Q 037566 62 ---SQEVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLV 129 (360)
Q Consensus 62 ---~~~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~ 129 (360)
. ++|+|+|+|+.... +.+..+++|+.|+.++++++...++....-.+||++||...|...
T Consensus 131 ~~~g-~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~------- 202 (317)
T 3oec_A 131 AEFG-HIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA------- 202 (317)
T ss_dssp HHHS-CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC-------
T ss_pred HHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC-------
Confidence 2 27999999985321 234578999999999999987643211123579999987654210
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHh
Q 037566 130 GQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICR 199 (360)
Q Consensus 130 g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~ 199 (360)
+ ....|+.+|...+ ...|+.+.+++|+.|+++..... . ....+..
T Consensus 203 -----------------~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~------~~~~~~~ 257 (317)
T 3oec_A 203 -----------------P-GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE-K------LLKMFLP 257 (317)
T ss_dssp -----------------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH-H------HHHHHCT
T ss_pred -----------------C-CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch-h------hhhhhhh
Confidence 1 1345888776443 34689999999999988632110 0 0000000
Q ss_pred hcCCCee-----eeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 200 HQGLPFR-----YLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 200 ~~~~~~~-----~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
....+.. ...... .....+.+.+|+|+++++++... ...|++++|.+|..
T Consensus 258 ~~~~~~~~~~~~~~~~~~--~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~ 314 (317)
T 3oec_A 258 HLENPTREDAAELFSQLT--LLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314 (317)
T ss_dssp TCSSCCHHHHHHHHTTTC--SSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred hccccchhHHHHHHhhhc--cCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence 0000000 000000 00135678999999999887532 23599999987754
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.42 E-value=8e-13 Score=120.97 Aligned_cols=202 Identities=11% Similarity=0.071 Sum_probs=135.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccCCC--CccEEEEe-eee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSISQ--EVTHLFWV-MFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~~~--~v~~V~h~-A~~ 74 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|.+++.++++.++. ++|+++|+ |+.
T Consensus 42 IG~aia~~l~~------~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~~id~lv~~aag~ 114 (281)
T 3ppi_A 42 LGEATVRRLHA------DGLGVVIADLAAEKGKALADELGNRAE-FVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGF 114 (281)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHTTSSEEEEEEECCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChHHHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHHHHhCCCCeEEEccCcc
Confidence 79999999999 8999999999753210 0134688 999999999998887764311 37999999 443
Q ss_pred cC-----------CC---hhHhhhhhHHHHHHHHHHHHhhccC-----CCCccEEEEeccCccccccccCCcccCCcCCC
Q 037566 75 RL-----------KS---EEINISNNSTMFKNVMSVVVDSNKG-----RSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 75 ~~-----------~~---~~~~~~vNv~gt~nll~a~~~~~~~-----~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
.. .+ .+..+++|+.|+.++++++...++. ..+-.+||++||...+...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 181 (281)
T 3ppi_A 115 GVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ------------- 181 (281)
T ss_dssp CCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC-------------
T ss_pred cccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC-------------
Confidence 21 11 3567899999999999998754211 0134589999987654310
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCe
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (360)
+ +...|+.+|...+ ...++.+.+++|+.|..+......... ...+. ...++
T Consensus 182 -----------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-----~~~~~--~~~~~ 242 (281)
T 3ppi_A 182 -----------I-GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEA-----LAKFA--ANIPF 242 (281)
T ss_dssp -----------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHH-----HHHHH--HTCCS
T ss_pred -----------C-CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHH-----HHHHH--hcCCC
Confidence 1 2345888876433 346899999999998765321111110 00111 12221
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCccc
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFT 253 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s 253 (360)
+ ..+.+.+|+|+++++++..+...|+++++.+|..++
T Consensus 243 --~---------~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 243 --P---------KRLGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT 279 (281)
T ss_dssp --S---------SSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred --C---------CCCCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence 1 235678999999999987666679999998887653
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.6e-12 Score=117.13 Aligned_cols=194 Identities=11% Similarity=0.009 Sum_probs=131.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++++.... . ....++. ++.+|++|+++++++++.+ . ++|+|+
T Consensus 43 IG~aia~~la~------~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv 114 (271)
T 3v2g_A 43 IGAAIAKRLAL------EGAAVALTYVNAAERAQAVVSEIEQAGGRAV-AIRADNRDAEAIEQAIRETVEALG-GLDILV 114 (271)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHHcC-CCcEEE
Confidence 79999999999 999999997764220 0 0135678 9999999999988877632 1 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++ .-.+||++||...+. .+
T Consensus 115 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~---~~g~iv~isS~~~~~----------------~~-- 173 (271)
T 3v2g_A 115 NSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLG---DGGRIITIGSNLAEL----------------VP-- 173 (271)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC---TTCEEEEECCGGGTC----------------CC--
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCEEEEEeChhhcc----------------CC--
Confidence 99985321 2346789999999999999987643 246899998853221 00
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+ +...|+.+|...+ ...|+.+.+++|+.|.++.......... ... ...|+ |
T Consensus 174 -----~~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~------~~~--~~~~~---~- 235 (271)
T 3v2g_A 174 -----WP-GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAE------AQR--ERIAT---G- 235 (271)
T ss_dssp -----ST-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHH------HHH--HTCTT---S-
T ss_pred -----CC-CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHH------HHH--hcCCC---C-
Confidence 01 2445888876443 3468999999999999875432111111 011 11221 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
.+.+.+|+|+++++++... ...|++++|.+|.
T Consensus 236 --------r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 236 --------SYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp --------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred --------CCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence 2456889999998887532 2458999997764
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.42 E-value=8.9e-12 Score=115.20 Aligned_cols=206 Identities=8% Similarity=-0.032 Sum_probs=133.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------------------CCCCCCceeeEeeccCChHHHHHHHccC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------------------WFPSSHVDHYITFDALDSTDTTQKLSSI- 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------------------~~~~~~v~~~v~gDl~d~~~l~~~l~~~- 61 (360)
||.+++++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+
T Consensus 40 IG~aia~~la~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~ 112 (299)
T 3t7c_A 40 QGRSHAITLAR------EGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRII-ASQVDVRDFDAMQAAVDDGV 112 (299)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------CCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHH
Confidence 79999999999 999999999873210 00134678 9999999999988877632
Q ss_pred ---CCCccEEEEeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcc
Q 037566 62 ---SQEVTHLFWVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSL 128 (360)
Q Consensus 62 ---~~~v~~V~h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~ 128 (360)
. .+|+|+|+|+.... +.+..+++|+.|+.++++++...++...+..+||++||...+...
T Consensus 113 ~~~g-~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------ 185 (299)
T 3t7c_A 113 TQLG-RLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA------ 185 (299)
T ss_dssp HHHS-CCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC------
T ss_pred HHhC-CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC------
Confidence 2 27999999985321 234678999999999999986543212235689999987654210
Q ss_pred cCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHH--------H
Q 037566 129 VGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLL--------T 190 (360)
Q Consensus 129 ~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~--------~ 190 (360)
+ ....|+.+|...+ ...|+.+..++|+.|..|...+...... .
T Consensus 186 ------------------~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 246 (299)
T 3t7c_A 186 ------------------E-NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPT 246 (299)
T ss_dssp ------------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred ------------------C-CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccch
Confidence 1 1345888776443 3458999999999998875322100000 0
Q ss_pred HHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCcc
Q 037566 191 LAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 252 (360)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~~ 252 (360)
...+....+.. ..+ + ..+.+.+|+|+++++++.... ..|++++|.+|..+
T Consensus 247 ~~~~~~~~~~~-~~~--p---------~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 247 VEDFQVASRQM-HVL--P---------IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298 (299)
T ss_dssp HHHHHHHHHHH-SSS--S---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hhHHHHHhhhh-ccc--C---------cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence 00000000000 000 1 235678999999999885432 35999999887643
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.42 E-value=4.1e-13 Score=121.30 Aligned_cols=202 Identities=12% Similarity=0.023 Sum_probs=130.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|++... . ....++. ++.+|++|++++.++++.+ . ++|+|||
T Consensus 14 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~lv~ 85 (256)
T 1geg_A 14 IGKAIALRLVK------DGFAVAIADYNDATAKAVASEINQAGGHAV-AVKVDVSDRDQVFAAVEQARKTLG-GFDVIVN 85 (256)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHHHHTT-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHHhC-CCCEEEE
Confidence 79999999999 899999999975321 0 0124678 8999999999988877632 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+.... +.+..+++|+.|+.++++++...++.. + ..+||++||...+.. .
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~---------------~--- 146 (256)
T 1geg_A 86 NAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE-GHGGKIINACSQAGHVG---------------N--- 146 (256)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSCEEEEEECCGGGTSC---------------C---
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCEEEEECchhhcCC---------------C---
Confidence 9985321 234578999999999999887653211 2 569999988754321 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhH-H-----HHHHHHHHHhhcCCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSL-L-----TLAVYATICRHQGLP 204 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~-~-----~~~~~~~~~~~~~~~ 204 (360)
| +...|+.+|...+ ...++.+.+++|+.|.++......... . .-.....+. ...|
T Consensus 147 ------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p 217 (256)
T 1geg_A 147 ------P-ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFA--KRIT 217 (256)
T ss_dssp ------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHH--TTCT
T ss_pred ------C-CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHH--hcCC
Confidence 1 1345888776443 346899999999999876311000000 0 000000000 0111
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
...+.+.+|+|+++++++..+ ...|+.+++.+|..
T Consensus 218 ------------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 218 ------------LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 254 (256)
T ss_dssp ------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred ------------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence 123678999999999887543 23589999977754
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.5e-12 Score=117.82 Aligned_cols=200 Identities=13% Similarity=0.063 Sum_probs=127.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++++.... .....++. ++.+|++|++++.++++.+ . ++|+++
T Consensus 20 IG~aia~~la~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv 91 (259)
T 3edm_A 20 IGRACAIRFAQ------EGANVVLTYNGAAEGAATAVAEIEKLGRSAL-AIKADLTNAAEVEAAISAAADKFG-EIHGLV 91 (259)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECSSCHHHHHHHHHHHTTTSCCE-EEECCTTCHHHHHHHHHHHHHHHC-SEEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHhC-CCCEEE
Confidence 79999999999 999999985543321 01135678 9999999999988877643 2 279999
Q ss_pred Eeeeec-CC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQR-LK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~-~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+.. .. + .+..+++|+.|+.++++++...++ .-.+||++||...+..+
T Consensus 92 ~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~----------------- 151 (259)
T 3edm_A 92 HVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMA---KGGAIVTFSSQAGRDGG----------------- 151 (259)
T ss_dssp ECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEECCHHHHHCC-----------------
T ss_pred ECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCEEEEEcCHHhccCC-----------------
Confidence 999843 11 2 245789999999999999987632 12489999987655110
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+ +...|+.+|...+ ...++.+..+.|+.|..+........ .....+. ...
T Consensus 152 ------~~-~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~----~~~~~~~--~~~------- 211 (259)
T 3edm_A 152 ------GP-GALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKP----EVRERVA--GAT------- 211 (259)
T ss_dssp ------ST-TCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--------------------------------
T ss_pred ------CC-CcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccCh----HHHHHHH--hcC-------
Confidence 01 1345888776544 23349999999998877532211100 0000000 011
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccH
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTW 254 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~ 254 (360)
....+.+.+|+|+++++++... ...|++|+|.+|...+.
T Consensus 212 -----p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~ 252 (259)
T 3edm_A 212 -----SLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFSE 252 (259)
T ss_dssp --------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC-
T ss_pred -----CCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCCC
Confidence 1234567899999999887543 23599999977765443
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=9.4e-14 Score=127.11 Aligned_cols=203 Identities=11% Similarity=0.059 Sum_probs=133.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC---CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF---PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~---~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .. ...++. ++.+|++|+++++++++.+ . ++|+|+
T Consensus 39 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv 110 (277)
T 4fc7_A 39 IGFRIAEIFMR------HGCHTVIASRSLPRVLTAARKLAGATGRRCL-PLSMDVRAPPAVMAAVDQALKEFG-RIDILI 110 (277)
T ss_dssp HHHHHHHHHHT------TTCEEEEEESCHHHHHHHHHHHHHHHSSCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 999999999975321 00 134678 9999999999988877643 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 111 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 171 (277)
T 4fc7_A 111 NCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-HGGVIVNITATLGNRGQ------------------ 171 (277)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCSHHHHTC------------------
T ss_pred ECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhCCCC------------------
Confidence 99984321 234578999999999999986432101 34689999987654310
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ ....|+.+|...+ ...|+.+..++|+.|.++.....+.... ....... ...|+
T Consensus 172 ------~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~--~~~~~~~--~~~p~----- 235 (277)
T 4fc7_A 172 ------A-LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQ--ASLSTKV--TASPL----- 235 (277)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCH--HHHHHHH--HTSTT-----
T ss_pred ------C-CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCH--HHHHHHh--ccCCC-----
Confidence 0 1345887775433 3468999999999998863110000000 0011111 12221
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccH
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTW 254 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~ 254 (360)
..+.+.+|+|+++++++... ...|++++|.+|..+++
T Consensus 236 -------~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~ 274 (277)
T 4fc7_A 236 -------QRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTF 274 (277)
T ss_dssp -------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred -------CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccCC
Confidence 13456889999999887532 24599999988876554
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.7e-13 Score=124.41 Aligned_cols=204 Identities=14% Similarity=0.052 Sum_probs=128.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
.||++++++|++ ..|++|++++|++... .+ ...+++ ++.+|++|.+++.++++.+ . ++|+||
T Consensus 15 gIG~~~a~~L~~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g-~id~li 87 (276)
T 1wma_A 15 GIGLAIVRDLCR-----LFSGDVVLTARDVTRGQAAVQQLQAEGLSPR-FHQLDIDDLQSIRALRDFLRKEYG-GLDVLV 87 (276)
T ss_dssp HHHHHHHHHHHH-----HSSSEEEEEESSHHHHHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHHHHHHHS-SEEEEE
T ss_pred HHHHHHHHHHHH-----hcCCeEEEEeCChHHHHHHHHHHHhcCCeeE-EEECCCCCHHHHHHHHHHHHHhcC-CCCEEE
Confidence 389999999996 1489999999974321 00 124688 9999999999988887633 1 179999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccC-CcccCCcCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFD-PSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~-~~~~g~~~~~~~p~ 139 (360)
|+|+.... +.+..+++|+.|+.++++++...++ ...+||++||..+|...... +...... ...++
T Consensus 88 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~~sS~~~~~~~~~~~~~~~~~~--~~~~~ 162 (276)
T 1wma_A 88 NNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIK---PQGRVVNVSSIMSVRALKSCSPELQQKF--RSETI 162 (276)
T ss_dssp ECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEECCHHHHHHHHTSCHHHHHHH--HCSSC
T ss_pred ECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhC---CCCEEEEECChhhhcccccCChhHHhhc--ccccc
Confidence 99985321 2345789999999999999987631 12489999998776421000 0000000 01122
Q ss_pred CCCC-----------------CCCCCCCCcHHHHHHHHh----------cC----CCCcEEEEcCCCeeecCCCCcchhH
Q 037566 140 KEDS-----------------LRLPFPNFYYAVEDIAAS----------YS----PAVTYSVHRSSIIIGASSRSLNNSL 188 (360)
Q Consensus 140 ~E~~-----------------p~~p~p~~~Y~~ek~l~e----------~~----~~~~~~ilRp~~vyGp~~~~~~~~~ 188 (360)
+|++ +....|...|+.+|...+ .. .++.+++++|+.|.++...
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~------ 236 (276)
T 1wma_A 163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG------ 236 (276)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC------
T ss_pred chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC------
Confidence 3321 111123467998886544 12 5899999999988664210
Q ss_pred HHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC----CCCCceeccCCCcc
Q 037566 189 LTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR----AKNQAFNCTNGDVF 252 (360)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~----~~g~~yni~~g~~~ 252 (360)
. ..+.+.+++|+++++++..+. ..|+.|+ ++..+
T Consensus 237 -------------~---------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~--~~~~~ 274 (276)
T 1wma_A 237 -------------P---------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS--EKRVE 274 (276)
T ss_dssp -------------T---------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE--TTEEE
T ss_pred -------------c---------------cccCChhHhhhhHhhhhcCcccccccCceEec--cCcee
Confidence 0 013568889999998886542 2355543 44443
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=4.8e-12 Score=116.14 Aligned_cols=205 Identities=10% Similarity=-0.025 Sum_probs=132.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----------------------CCCCCCceeeEeeccCChHHHHHHH
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----------------------WFPSSHVDHYITFDALDSTDTTQKL 58 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----------------------~~~~~~v~~~v~gDl~d~~~l~~~l 58 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++++++
T Consensus 23 IG~aia~~la~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~ 95 (286)
T 3uve_A 23 QGRSHAVRLAQ------EGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIV-TAEVDVRDYDALKAAV 95 (286)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHH
T ss_pred HHHHHHHHHHH------CCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceE-EEEcCCCCHHHHHHHH
Confidence 79999999999 999999999873210 00134678 8999999999988877
Q ss_pred ccC----CCCccEEEEeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcccccccc
Q 037566 59 SSI----SQEVTHLFWVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVF 124 (360)
Q Consensus 59 ~~~----~~~v~~V~h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~ 124 (360)
+.+ . ++|+++|+|+.... +.+..+++|+.|+.++++++...++....-.+||++||...+...
T Consensus 96 ~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-- 172 (286)
T 3uve_A 96 DSGVEQLG-RLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY-- 172 (286)
T ss_dssp HHHHHHHS-CCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--
T ss_pred HHHHHHhC-CCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCC--
Confidence 632 1 27999999985321 234578999999999999987653211123589999987654210
Q ss_pred CCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHH---
Q 037566 125 DPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTL--- 191 (360)
Q Consensus 125 ~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~--- 191 (360)
| ....|+.+|...+ ...|+.+..++|+.|..+...+. ......
T Consensus 173 ----------------------~-~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~ 228 (286)
T 3uve_A 173 ----------------------P-HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNE-GTFKMFRPD 228 (286)
T ss_dssp ----------------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSH-HHHHHHCTT
T ss_pred ----------------------C-CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccccc-chhhhcccc
Confidence 1 1345888775433 34689999999999988743221 000000
Q ss_pred ------HHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 192 ------AVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 192 ------~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
.....+.+ .... .+ ..+.+.+|+|+++++++... -..|++++|.+|..+
T Consensus 229 ~~~~~~~~~~~~~~-~~~~--~p---------~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 229 LENPGPDDMAPICQ-MFHT--LP---------IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285 (286)
T ss_dssp SSSCCHHHHHHHHH-TTCS--SS---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ccccchhhHHHHHH-hhhc--cC---------CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence 00000000 0001 01 24568999999999887532 235999999877643
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=6.9e-12 Score=114.45 Aligned_cols=198 Identities=7% Similarity=-0.075 Sum_probs=131.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CC--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WF--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
.||++++++|++ +|++|++++|+.... .. ....+. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 19 gIG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~lv~ 90 (275)
T 2pd4_A 19 SIAYGIAQSCFN------QGATLAFTYLNESLEKRVRPIAQELNSPY-VYELDVSKEEHFKSLYNSVKKDLG-SLDFIVH 90 (275)
T ss_dssp SHHHHHHHHHHT------TTCEEEEEESSTTTHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHHHHHHHTS-CEEEEEE
T ss_pred cHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 389999999999 899999999976410 00 012477 8999999999988877643 2 2799999
Q ss_pred eeeecCC-------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 71 VMFQRLK-------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 71 ~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
+|+.... +.+..+++|+.|+.++++++...++ .-.+||++||...+.. .
T Consensus 91 nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~---------------~ 152 (275)
T 2pd4_A 91 SVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN---NGASVLTLSYLGSTKY---------------M 152 (275)
T ss_dssp CCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECGGGTSB---------------C
T ss_pred CCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc---cCCEEEEEecchhcCC---------------C
Confidence 9985321 2345789999999999999987642 1258999998654321 0
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|.++.......... ....+.+ ..|+
T Consensus 153 ---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p~-- 215 (275)
T 2pd4_A 153 ---------A-HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRM---ILKWNEI--NAPL-- 215 (275)
T ss_dssp ---------T-TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHH---HHHHHHH--HSTT--
T ss_pred ---------C-CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHH---HHHHHHh--cCCc--
Confidence 1 1335888776544 3568999999999999874322111100 1111111 1121
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
+ -+.+.+|+|+++++++..+ ...|+.|++.+|..
T Consensus 216 -~---------~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~ 251 (275)
T 2pd4_A 216 -R---------KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH 251 (275)
T ss_dssp -S---------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -C---------CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 1 2346889999999887532 23589998877653
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.40 E-value=9.2e-13 Score=120.47 Aligned_cols=200 Identities=13% Similarity=0.048 Sum_probs=130.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||++++++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+ . ++|+|||+
T Consensus 41 IG~aia~~L~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lvnn 112 (276)
T 2b4q_A 41 IGQMIAQGLLE------AGARVFICARDAEACADTATRLSAYGDCQ-AIPADLSSEAGARRLAQALGELSA-RLDILVNN 112 (276)
T ss_dssp HHHHHHHHHHH------TTCEEEEECSCHHHHHHHHHHHTTSSCEE-ECCCCTTSHHHHHHHHHHHHHHCS-CCSEEEEC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCceE-EEEeeCCCHHHHHHHHHHHHHhcC-CCCEEEEC
Confidence 79999999999 899999999875321 00112678 8999999999988877632 2 27999999
Q ss_pred eeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCC---CCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 72 MFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGR---SRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 72 A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~---~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+.... +.+..+++|+.|+.++++++...++.. .++.+||++||...|...
T Consensus 113 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~----------------- 175 (276)
T 2b4q_A 113 AGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM----------------- 175 (276)
T ss_dssp CCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC-----------------
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC-----------------
Confidence 985321 234678999999999998886533211 123799999997655310
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+.....|+.+|...+ ...++.+.+++|+.|..+........ ....+.+....|+
T Consensus 176 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~p~---- 239 (276)
T 2b4q_A 176 -------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND-----PQALEADSASIPM---- 239 (276)
T ss_dssp -------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC-----HHHHHHHHHTSTT----
T ss_pred -------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh-----HHHHHHhhcCCCC----
Confidence 000114888776544 34689999999999987532110000 0001110001121
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..+.+.+|+|+++++++..+ ...|+++++.+|.
T Consensus 240 --------~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 240 --------GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp --------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred --------CCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 23567899999999887643 2358999997764
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-12 Score=117.85 Aligned_cols=193 Identities=11% Similarity=0.025 Sum_probs=124.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC----
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK---- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~---- 77 (360)
||++++++|++ +|++|++++|++...... ..+. ++ +|+ .+++.++++.+.. +|+|||+|+....
T Consensus 31 IG~~~a~~l~~------~G~~V~~~~r~~~~~~~~-~~~~-~~-~D~--~~~~~~~~~~~~~-iD~lv~~Ag~~~~~~~~ 98 (249)
T 1o5i_A 31 IGRAVADVLSQ------EGAEVTICARNEELLKRS-GHRY-VV-CDL--RKDLDLLFEKVKE-VDILVLNAGGPKAGFFD 98 (249)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHT-CSEE-EE-CCT--TTCHHHHHHHSCC-CSEEEECCCCCCCBCGG
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCHHHHHhh-CCeE-EE-eeH--HHHHHHHHHHhcC-CCEEEECCCCCCCCChh
Confidence 89999999999 899999999975211001 2456 67 999 4456666655432 7999999985321
Q ss_pred -----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCc
Q 037566 78 -----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFY 152 (360)
Q Consensus 78 -----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~ 152 (360)
+.+..+++|+.|+.++.+++...++.. +..+||++||..+|... + +...
T Consensus 99 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------------~-~~~~ 152 (249)
T 1o5i_A 99 ELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVISPI------------------------E-NLYT 152 (249)
T ss_dssp GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC------------------------T-TBHH
T ss_pred hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcchHhcCCC------------------------C-CCch
Confidence 234578999999887776664432111 56899999998766410 1 1345
Q ss_pred HHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHH-HHHhhcCCCeeeeCCccccccccccc
Q 037566 153 YAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYA-TICRHQGLPFRYLGNKYTWEHFCDMS 221 (360)
Q Consensus 153 Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~~~~~~~~d~~ 221 (360)
|+.+|...+ ...|+.++++||+.|+++........ ... .+. ...| ...+.
T Consensus 153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~--~~~p------------~~~~~ 213 (249)
T 1o5i_A 153 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE-----EKKKQVE--SQIP------------MRRMA 213 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH-----HHHHHHH--TTST------------TSSCB
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchh-----hHHHHHH--hcCC------------CCCCc
Confidence 877775443 34689999999999998742110010 000 111 1111 12356
Q ss_pred CHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 222 DSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 222 ~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
+.+|+|+++++++..+ ...|++|++.+|..
T Consensus 214 ~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~ 245 (249)
T 1o5i_A 214 KPEEIASVVAFLCSEKASYLTGQTIVVDGGLS 245 (249)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred CHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 8999999998887543 23489999987753
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.8e-12 Score=121.07 Aligned_cols=147 Identities=14% Similarity=0.028 Sum_probs=105.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
.||++|+++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+
T Consensus 19 gIG~~la~~l~~------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~id~ 90 (319)
T 3ioy_A 19 GVGIGLVRQLLN------QGCKVAIADIRQDSIDKALATLEAEGSGPEVM-GVQLDVASREGFKMAADEVEARFG-PVSI 90 (319)
T ss_dssp THHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEE-EEECCTTCHHHHHHHHHHHHHHTC-CEEE
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCCCeEE-EEECCCCCHHHHHHHHHHHHHhCC-CCCE
Confidence 489999999999 999999999975321 00112678 8999999999988887654 2 2899
Q ss_pred EEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCC-----CCccEEEEeccCccccccccCCcccCCcC
Q 037566 68 LFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGR-----SRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 68 V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~-----~~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
|||+|+.... +.+..+++|+.|+.++++++...++.. .+-.+||++||.+.+...
T Consensus 91 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~----------- 159 (319)
T 3ioy_A 91 LCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA----------- 159 (319)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC-----------
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC-----------
Confidence 9999985321 244678999999999999987753100 123579999997655310
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHH----HHh------cCCCCcEEEEcCCCeeecC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDI----AAS------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~----l~e------~~~~~~~~ilRp~~vyGp~ 180 (360)
| ....|+.+|. +.+ ...|+.+++++|+.|.++-
T Consensus 160 -------------~-~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 202 (319)
T 3ioy_A 160 -------------G-SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI 202 (319)
T ss_dssp -------------S-SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred -------------C-CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence 1 1345888887 443 3468999999999998864
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.4e-12 Score=117.94 Aligned_cols=203 Identities=10% Similarity=0.020 Sum_probs=131.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC--CC-------CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP--SW-------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~--~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|++.. .. ....++. ++.+|++|++++.++++.+ . ++|+|
T Consensus 14 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~l 85 (258)
T 3a28_C 14 IGRGISEKLAA------DGFDIAVADLPQQEEQAAETIKLIEAADQKAV-FVGLDVTDKANFDSAIDEAAEKLG-GFDVL 85 (258)
T ss_dssp HHHHHHHHHHH------HTCEEEEEECGGGHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHHHHHHHHHT-CCCEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcchHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHhC-CCCEE
Confidence 79999999999 89999999987543 10 0134678 8999999999988877632 1 17999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCc-cEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRL-RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v-~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
||+|+.... +.+..+++|+.|+.++++++...++.. +. .+||++||...+...
T Consensus 86 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~---------------- 148 (258)
T 3a28_C 86 VNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDEL-GVKGKIINAASIAAIQGF---------------- 148 (258)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCCEEEEECCGGGTSCC----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCcEEEEECcchhccCC----------------
Confidence 999985321 234578999999999999987643211 34 799999987654210
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHH----H--HHHHHHHHhhcC
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLL----T--LAVYATICRHQG 202 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~----~--~~~~~~~~~~~~ 202 (360)
+ +...|+.+|...+ ...++.+.+++|+.|..+.......... . -.....+. ..
T Consensus 149 --------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 217 (258)
T 3a28_C 149 --------P-ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYS--SS 217 (258)
T ss_dssp --------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHH--TT
T ss_pred --------C-CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHH--hc
Confidence 1 1345888776543 3468999999999887642100000000 0 00000000 01
Q ss_pred CCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 203 LPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 203 ~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
.| ...+.+.+|+|+++++++..+ ...|+.+++.+|..+
T Consensus 218 ~p------------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 218 IA------------LGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY 257 (258)
T ss_dssp CT------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred CC------------CCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence 11 123567899999999887543 245899999877543
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=4.4e-13 Score=120.56 Aligned_cols=198 Identities=13% Similarity=0.044 Sum_probs=130.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|+++++++++.+ . ++|+|+|+|+
T Consensus 18 IG~a~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg 89 (247)
T 3rwb_A 18 IGKAIAARLAA------DGATVIVSDINAEGAKAAAASIGKKAR-AIAADISDPGSVKALFAEIQALTG-GIDILVNNAS 89 (247)
T ss_dssp HHHHHHHHHHH------TTCEEEEECSCHHHHHHHHHHHCTTEE-ECCCCTTCHHHHHHHHHHHHHHHS-CCSEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHHHHHCC-CCCEEEECCC
Confidence 79999999999 9999999998753210 0135688 9999999999988877643 1 2799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++++++...++......+||++||...+...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------- 147 (247)
T 3rwb_A 90 IVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT---------------------- 147 (247)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC----------------------
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC----------------------
Confidence 5321 234578999999999999965433211125789999987654310
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
| +...|+.+|...+ ...|+.+..++|+.|..+.......... .... . ...++
T Consensus 148 --~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~----~~~~-~-~~~~~--------- 209 (247)
T 3rwb_A 148 --P-NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEA----FGFV-E-MLQAM--------- 209 (247)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGG----HHHH-H-HHSSS---------
T ss_pred --C-CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHH----HHHH-h-ccccc---------
Confidence 1 1345888774433 3468999999999998763211111000 0000 0 00111
Q ss_pred cccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..+...+|+|+++.+++... ...|++++|.+|-
T Consensus 210 ---~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 210 ---KGKGQPEHIADVVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp ---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred ---CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 12356889999998887543 2358999997764
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2.8e-12 Score=116.78 Aligned_cols=199 Identities=10% Similarity=-0.065 Sum_probs=130.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++++.... .....++. ++.+|++|++++.++++.+ .. +|+++
T Consensus 30 IG~aia~~l~~------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g~-id~lv 101 (270)
T 3is3_A 30 IGAAVAVHLGR------LGAKVVVNYANSTKDAEKVVSEIKALGSDAI-AIKADIRQVPEIVKLFDQAVAHFGH-LDIAV 101 (270)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHHHHHSC-CCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHcCC-CCEEE
Confidence 79999999999 999999988764321 00135688 9999999999988877643 22 79999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++ .-.+||++||...... +
T Consensus 102 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~---~~g~iv~isS~~~~~~----------------~-- 160 (270)
T 3is3_A 102 SNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLT---EGGRIVLTSSNTSKDF----------------S-- 160 (270)
T ss_dssp CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC---TTCEEEEECCTTTTTC----------------C--
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCeEEEEeCchhccC----------------C--
Confidence 99985321 2345789999999999999988742 1248999988642110 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcc--------hhHHHHHHHHHHHhhcC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLN--------NSLLTLAVYATICRHQG 202 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~--------~~~~~~~~~~~~~~~~~ 202 (360)
.| +...|+.+|...+ ...|+.+..++|+.|..+...... .... -.....+. ..
T Consensus 161 -----~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~ 231 (270)
T 3is3_A 161 -----VP-KHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTA-EQRQQMAA--HA 231 (270)
T ss_dssp -----CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCH-HHHHHHHH--HH
T ss_pred -----CC-CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccch-HHHHHHHH--hc
Confidence 01 2445888776544 346899999999999876321000 0000 00000010 01
Q ss_pred CCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 203 LPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 203 ~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
.| ...+.+.+|+|+++++++... ...|++++|.+|.
T Consensus 232 ~p------------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 232 SP------------LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp ST------------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred CC------------CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence 11 123567899999999887532 2358999997764
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.9e-12 Score=119.39 Aligned_cols=198 Identities=7% Similarity=-0.060 Sum_probs=131.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C-CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W-FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~-~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|+++++++++.+ . .+|+++|+
T Consensus 45 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lVnn 116 (293)
T 3grk_A 45 IAWGIAKAARE------AGAELAFTYQGDALKKRVEPLAEELGAFV-AGHCDVADAASIDAVFETLEKKWG-KLDFLVHA 116 (293)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECSHHHHHHHHHHHHHHTCEE-EEECCTTCHHHHHHHHHHHHHHTS-CCSEEEEC
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHHHhcCCce-EEECCCCCHHHHHHHHHHHHHhcC-CCCEEEEC
Confidence 89999999999 999999999874210 0 0113578 9999999999988877643 2 28999999
Q ss_pred eeecC-----C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 72 MFQRL-----K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 72 A~~~~-----~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+... . +....+++|+.|+.++++++...++ .-.+||++||...+...
T Consensus 117 AG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~g~Iv~isS~~~~~~~---------------- 177 (293)
T 3grk_A 117 IGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMA---DGGSILTLTYYGAEKVM---------------- 177 (293)
T ss_dssp CCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTT---TCEEEEEEECGGGTSBC----------------
T ss_pred CccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCEEEEEeehhhccCC----------------
Confidence 98542 1 2345789999999999999987642 23589999987654310
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
+ ....|+.+|...+ ...|+.+..++|+.|..+.......... ....+.+ ..|+
T Consensus 178 --------~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p~--- 240 (293)
T 3grk_A 178 --------P-NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRY---ILKWNEY--NAPL--- 240 (293)
T ss_dssp --------T-TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHH---HHHHHHH--HSTT---
T ss_pred --------C-chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHH---HHHHHHh--cCCC---
Confidence 1 1345888776443 3468999999999998874322111111 0111111 1221
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
..+...+|+|+++++++... ...|+++++.+|..+
T Consensus 241 ---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (293)
T 3grk_A 241 ---------RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHV 277 (293)
T ss_dssp ---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ---------CCCCCHHHHHHHHHHHcCccccCCcceEEEECCCccc
Confidence 12456889999999887542 245999999888654
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-12 Score=118.66 Aligned_cols=198 Identities=10% Similarity=0.019 Sum_probs=129.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C---CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F---PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~---~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|++.... . ...++. ++.+|++|++++.++++.+ . ++|+||
T Consensus 33 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~lv 104 (267)
T 1vl8_A 33 LGFGIAQGLAE------AGCSVVVASRNLEEASEAAQKLTEKYGVETM-AFRCDVSNYEEVKKLLEAVKEKFG-KLDTVV 104 (267)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHHCCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 8999999999743210 0 024577 8999999999988877632 1 179999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc-ccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH-YMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||..+ +. +.
T Consensus 105 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~-----------------~~ 166 (267)
T 1vl8_A 105 NAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSLTVEEV-----------------TM 166 (267)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECCGGGTCC-----------------CS
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECCcchhcc-----------------CC
Confidence 99985321 234578999999999999986644312 4679999998752 11 00
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+ +...|+.+|...+ ...|+.+.+++|+.|..+........ . .....+. ...|+
T Consensus 167 -------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~-~~~~~~~--~~~p~---- 229 (267)
T 1vl8_A 167 -------P-NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD--P-EKLDYML--KRIPL---- 229 (267)
T ss_dssp -------S-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC--H-HHHHHHH--HTCTT----
T ss_pred -------C-CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC--h-HHHHHHH--hhCCC----
Confidence 1 2345888776544 34589999999999977532110000 0 0111111 11121
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..+.+.+|+|+++++++..+ ...|+.+++.+|.
T Consensus 230 --------~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 264 (267)
T 1vl8_A 230 --------GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW 264 (267)
T ss_dssp --------SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --------CCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence 12456778999888887542 2358999887764
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.39 E-value=9.9e-13 Score=117.51 Aligned_cols=198 Identities=13% Similarity=0.098 Sum_probs=128.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h~A~~~~~ 77 (360)
||++++++|++ +|++|++++|++.... ...++. ++.+|++| +++.++++ .... +|+|+|+|+....
T Consensus 14 iG~~~a~~l~~------~G~~V~~~~r~~~~~~-~~~~~~-~~~~D~~~-~~~~~~~~~~~~~~g~-id~lv~~Ag~~~~ 83 (239)
T 2ekp_A 14 IGRAIAEALVA------RGYRVAIASRNPEEAA-QSLGAV-PLPTDLEK-DDPKGLVKRALEALGG-LHVLVHAAAVNVR 83 (239)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHH-HHHTCE-EEECCTTT-SCHHHHHHHHHHHHTS-CCEEEECCCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHH-HhhCcE-EEecCCch-HHHHHHHHHHHHHcCC-CCEEEECCCCCCC
Confidence 79999999999 8999999999754310 001367 89999999 76665554 2222 7999999985321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.|+.++++++...++.. +..+||++||...|... . +.
T Consensus 84 ~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~-------------~----------~~ 139 (239)
T 2ekp_A 84 KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-GWGRVLFIGSVTTFTAG-------------G----------PV 139 (239)
T ss_dssp CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC-------------T----------TS
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhccCC-------------C----------CC
Confidence 234678999999999999986532211 46899999998766420 0 01
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
+...|+.+|...+ ...|++++++||+.|.++........ . .....+. ...|+ .
T Consensus 140 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~-~~~~~~~--~~~p~------------~ 202 (239)
T 2ekp_A 140 PIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQN--P-ELYEPIT--ARIPM------------G 202 (239)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC--H-HHHHHHH--TTCTT------------S
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccC--H-HHHHHHH--hcCCC------------C
Confidence 2446888776544 34589999999999988632110000 0 0111111 11111 1
Q ss_pred cccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 219 DMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
.+.+.+|+|+++++++..+ ...|+.+++.+|.
T Consensus 203 ~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 203 RWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred CCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence 3567899999998887532 2358999887764
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=4.4e-13 Score=122.21 Aligned_cols=205 Identities=11% Similarity=0.014 Sum_probs=131.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~ 74 (360)
||++++++|++ +|++|++++|++.... ....++. ++.+|++|++++.++++.+ . ++|+|||+|+.
T Consensus 21 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv~nAg~ 92 (270)
T 1yde_A 21 IGAGIVRAFVN------SGARVVICDKDESGGRALEQELPGAV-FILCDVTQEDDVKTLVSETIRRFG-RLDCVVNNAGH 92 (270)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHCTTEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEEEECCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhcCCe-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCC
Confidence 79999999999 8999999999753210 0112478 9999999999988877643 1 27999999985
Q ss_pred cCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 75 RLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 75 ~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
... +.+..+++|+.|+.++++++...++. +..+||++||...+.. .
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~g~iv~isS~~~~~~-------------~--------- 148 (270)
T 1yde_A 93 HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK--SQGNVINISSLVGAIG-------------Q--------- 148 (270)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEECCHHHHHC-------------C---------
T ss_pred CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--CCCEEEEEcCccccCC-------------C---------
Confidence 321 13457899999999999999754321 2468999998653311 0
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcch-hHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNN-SLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
+ ....|+.+|...+ ...|+.+.++||+.|++|....... .......+... ....|+
T Consensus 149 --~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~p~-------- 215 (270)
T 1yde_A 149 --A-QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREG--MLAQPL-------- 215 (270)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHH--HHTSTT--------
T ss_pred --C-CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHH--hhcCCC--------
Confidence 0 1334888776544 3468999999999999873111000 00000000000 011121
Q ss_pred ccccccccCHHHHHHHHHHHHcCC-CCCCCceeccCCCcccHH
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD-RAKNQAFNCTNGDVFTWK 255 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~-~~~g~~yni~~g~~~s~~ 255 (360)
..+...+|+|+++++++... ...|+.++|.+|..+.+.
T Consensus 216 ----~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~ 254 (270)
T 1yde_A 216 ----GRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYG 254 (270)
T ss_dssp ----SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC-
T ss_pred ----CCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccC
Confidence 12456888999888876532 345899999888766543
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=4.2e-12 Score=115.06 Aligned_cols=149 Identities=13% Similarity=0.070 Sum_probs=105.4
Q ss_pred chHHHHHHHhcCCCCCCCC---cEEEEEecCCCCCC-C-----CCCCceeeEeeccCChHHHHHHHccCCC-----CccE
Q 037566 2 AGLSLAEALKNNPTIPGGP---WKVYGTARRPPPSW-F-----PSSHVDHYITFDALDSTDTTQKLSSISQ-----EVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g---~~V~~l~r~~~~~~-~-----~~~~v~~~v~gDl~d~~~l~~~l~~~~~-----~v~~ 67 (360)
||++|+++|++ +| ++|++++|+..... . ...+++ ++.+|++|.+++.++++.+.. ++|+
T Consensus 33 IG~~la~~L~~------~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~ 105 (267)
T 1sny_A 33 LGLGLVKALLN------LPQPPQHLFTTCRNREQAKELEDLAKNHSNIH-ILEIDLRNFDAYDKLVADIEGVTKDQGLNV 105 (267)
T ss_dssp HHHHHHHHHHT------SSSCCSEEEEEESCTTSCHHHHHHHHHCTTEE-EEECCTTCGGGHHHHHHHHHHHHGGGCCSE
T ss_pred HHHHHHHHHHh------cCCCCcEEEEEecChhhhHHHHHhhccCCceE-EEEecCCChHHHHHHHHHHHHhcCCCCccE
Confidence 79999999998 88 99999999865321 0 124688 999999999998888763300 1799
Q ss_pred EEEeeeecC-C---------ChhHhhhhhHHHHHHHHHHHHhhccCC------C----CccEEEEeccCccccccccCCc
Q 037566 68 LFWVMFQRL-K---------SEEINISNNSTMFKNVMSVVVDSNKGR------S----RLRHVTLLMGTKHYMGPVFDPS 127 (360)
Q Consensus 68 V~h~A~~~~-~---------~~~~~~~vNv~gt~nll~a~~~~~~~~------~----~v~r~v~~SS~~vYg~~~~~~~ 127 (360)
|||+|+... . +.+..+++|+.|+.++++++...++.. . +..+||++||...|...
T Consensus 106 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----- 180 (267)
T 1sny_A 106 LFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG----- 180 (267)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT-----
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC-----
Confidence 999998543 1 234578999999999999987643200 0 04689999998765421
Q ss_pred ccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 128 LVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 128 ~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
. + . .+...|+.+|...+ ...++.++++||+.|..+
T Consensus 181 --------~-------~-~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 225 (267)
T 1sny_A 181 --------N-------T-D-GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 225 (267)
T ss_dssp --------C-------C-S-CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred --------C-------C-C-CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecC
Confidence 0 0 0 12445888876554 236899999999988653
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=3.9e-12 Score=116.59 Aligned_cols=202 Identities=11% Similarity=-0.056 Sum_probs=131.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|.+++.++++.+ . ++|+|+
T Consensus 41 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g-~iD~lv 112 (283)
T 1g0o_A 41 IGREMAMELGR------RGCKVIVNYANSTESAEEVVAAIKKNGSDAA-CVKANVGVVEDIVRMFEEAVKIFG-KLDIVC 112 (283)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCchHHHHHHHHHHHHhCCCeE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 899999999875320 00134678 8999999999887776532 2 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++ +..+||++||...+.. .
T Consensus 113 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~--------------~---- 171 (283)
T 1g0o_A 113 SNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE---IGGRLILMGSITGQAK--------------A---- 171 (283)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC---TTCEEEEECCGGGTCS--------------S----
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh---cCCeEEEEechhhccC--------------C----
Confidence 99985321 2345789999999999999987642 3469999998754321 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhH-H-----HHHHHHHHHhhcCCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSL-L-----TLAVYATICRHQGLP 204 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~-~-----~~~~~~~~~~~~~~~ 204 (360)
+.+...|+.+|...+ ...|+.+.+++|+.|.++......... . .-.....+.+....|
T Consensus 172 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 245 (283)
T 1g0o_A 172 ------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP 245 (283)
T ss_dssp ------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT
T ss_pred ------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC
Confidence 011445888776544 346899999999999876311000000 0 000000010000111
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
...+.+.+|+|+++++++..+ ...|++++|.+|.
T Consensus 246 ------------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 246 ------------LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp ------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ------------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 123567899999999888543 2358999987764
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.38 E-value=7.1e-13 Score=122.77 Aligned_cols=193 Identities=9% Similarity=-0.072 Sum_probs=120.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|.+++.++++.+ . ++|+|||
T Consensus 43 IG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~id~lvn 114 (301)
T 3tjr_A 43 IGLATATEFAR------RGARLVLSDVDQPALEQAVNGLRGQGFDAH-GVVCDVRHLDEMVRLADEAFRLLG-GVDVVFS 114 (301)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-SCSEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHhCC-CCCEEEE
Confidence 79999999999 999999999975321 0 0134688 9999999999988877643 1 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++......+||++||...+..
T Consensus 115 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------------- 174 (301)
T 3tjr_A 115 NAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-------------------- 174 (301)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC--------------------
T ss_pred CCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC--------------------
Confidence 9985321 23457899999999999998654221112468999998765421
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
.| +...|+.+|...+ ...|+.+.+++|+.|..+-. ......... .. .....+....+..
T Consensus 175 ----~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~----~~~~~~~~~-~~-~~~~~~~~~~~~~ 243 (301)
T 3tjr_A 175 ----NA-GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLV----SNSERIRGA-DY-GMSATPEGAFGPL 243 (301)
T ss_dssp ----CT-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHH----HHHHHHC-------------------
T ss_pred ----CC-CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccc----cccccccch-hh-ccccChhhhcccc
Confidence 01 2445888886443 34689999999998875421 100000000 00 0001111111211
Q ss_pred ccccccccccCHHHHHHHHHHHHcC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATT 236 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~ 236 (360)
. ...++++++|+|++++.++..
T Consensus 244 ~---~~~~~~~pedvA~~i~~~l~~ 265 (301)
T 3tjr_A 244 P---TQDESVSADDVARLTADAILA 265 (301)
T ss_dssp --------CCCHHHHHHHHHHHHHH
T ss_pred c---cccCCCCHHHHHHHHHHHHhc
Confidence 1 234678999999999988864
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2e-12 Score=117.48 Aligned_cols=204 Identities=12% Similarity=0.014 Sum_probs=132.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C---CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W---FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~---~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|++++.++++.+ . ++|++
T Consensus 20 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~l 91 (265)
T 3lf2_A 20 IGLATVELLLE------AGAAVAFCARDGERLRAAESALRQRFPGARLF-ASVCDVLDALQVRAFAEACERTLG-CASIL 91 (265)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEE-EEECCTTCHHHHHHHHHHHHHHHC-SCSEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEE-EEeCCCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 79999999999 899999999975321 0 1123478 8999999999988777643 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|+.... +.+..+++|+.|+.++++++...++.. +-.+||++||...+..
T Consensus 92 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~------------------ 152 (265)
T 3lf2_A 92 VNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-ADAAIVCVNSLLASQP------------------ 152 (265)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTEEEEEEEEGGGTSC------------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCeEEEEECCcccCCC------------------
Confidence 999985321 234578999999999999997654322 3568999998754421
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchh-----HHHHHHHHHHHhhcCCC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNS-----LLTLAVYATICRHQGLP 204 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~-----~~~~~~~~~~~~~~~~~ 204 (360)
.+ ....|+.+|...+ ...|+.+..++|+.|..|........ ...-.....+.+....|
T Consensus 153 ------~~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 225 (265)
T 3lf2_A 153 ------EP-HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP 225 (265)
T ss_dssp ------CT-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT
T ss_pred ------CC-CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC
Confidence 01 1345887775433 34689999999999987631110000 00000000111101112
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
+ ..+.+.+|+|+++++++... ...|++++|.+|..
T Consensus 226 ~------------~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 226 L------------GRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp T------------CSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred c------------CCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 1 23567899999999887532 23589999977754
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.7e-12 Score=118.42 Aligned_cols=186 Identities=13% Similarity=0.004 Sum_probs=118.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ . ++|+|+|+|+
T Consensus 40 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lVnnAg 111 (272)
T 4dyv_A 40 VGRAVAVALAG------AGYGVALAGRRLDALQETAAEIGDDAL-CVPTDVTDPDSVRALFTATVEKFG-RVDVLFNNAG 111 (272)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHTSCCE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhCCCeE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 79999999999 8999999999753210 0124678 9999999999988887643 1 1799999998
Q ss_pred ecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCC-CccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 74 QRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRS-RLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 74 ~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~-~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
.... +.+..+++|+.|+.++++++...++... +-.+||++||...+...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-------------------- 171 (272)
T 4dyv_A 112 TGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR-------------------- 171 (272)
T ss_dssp CCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC--------------------
T ss_pred CCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC--------------------
Confidence 6321 2345789999999999998876543111 13589999987544210
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
+ +...|+.+|...+ ...++.+..++|+.|..+....... +.+... ..
T Consensus 172 ----~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---------------~~~~~~-~~-- 228 (272)
T 4dyv_A 172 ----P-YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKA---------------GVPQAD-LS-- 228 (272)
T ss_dssp ----T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------
T ss_pred ----C-CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcc---------------cchhhh-hc--
Confidence 1 2445888776544 3468999999999887753211100 000000 00
Q ss_pred cccccccccCHHHHHHHHHHHHcCCCCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTDRAK 240 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~~~~ 240 (360)
.....+.+++|+|+++++++..+...
T Consensus 229 --~~~~~~~~pedvA~~v~fL~s~~~~~ 254 (272)
T 4dyv_A 229 --IKVEPVMDVAHVASAVVYMASLPLDA 254 (272)
T ss_dssp ---------CHHHHHHHHHHHHHSCTTS
T ss_pred --ccccCCCCHHHHHHHHHHHhCCCCcC
Confidence 01123568999999999998866543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.37 E-value=4.4e-12 Score=112.53 Aligned_cols=175 Identities=15% Similarity=0.048 Sum_probs=118.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|.++++++++.+....|+|+|+|+....
T Consensus 13 IG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag~~~~ 85 (230)
T 3guy_A 13 LGAELAKLYDA------EGKATYLTGRSESKLSTVTNCLSNNVG-YRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYF 85 (230)
T ss_dssp HHHHHHHHHHH------TTCCEEEEESCHHHHHHHHHTCSSCCC-EEECCTTCHHHHHHHHHSCSSCCSEEEECCCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHhhccC-eEeecCCCHHHHHHHHHHHhhcCCEEEEeCCcCCC
Confidence 79999999999 899999999975321 01135688 99999999999999998874335899999985321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.|+.++++++...++.. + .+||++||...+... +
T Consensus 86 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~-~~iv~isS~~~~~~~------------------------~- 138 (230)
T 3guy_A 86 GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ-P-VNVVMIMSTAAQQPK------------------------A- 138 (230)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-C-CEEEEECCGGGTSCC------------------------T-
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C-CeEEEEeecccCCCC------------------------C-
Confidence 234578999999999999998754322 2 289999987654310 1
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
+...|+.+|...+ ...++.+..++|+.|..+-... .+...+ ..
T Consensus 139 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----------------~~~~~~----------~~ 191 (230)
T 3guy_A 139 QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET-----------------SGKSLD----------TS 191 (230)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC------------------------------------------
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh-----------------cCCCCC----------cc
Confidence 2345888776443 3468999999998886542110 000111 12
Q ss_pred cccCHHHHHHHHHHHHcCC
Q 037566 219 DMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~ 237 (360)
.+.+.+|+|+++++++..+
T Consensus 192 ~~~~~~dvA~~i~~l~~~~ 210 (230)
T 3guy_A 192 SFMSAEDAALMIHGALANI 210 (230)
T ss_dssp -CCCHHHHHHHHHHHCCEE
T ss_pred cCCCHHHHHHHHHHHHhCc
Confidence 3567899999999887544
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.36 E-value=1e-12 Score=116.74 Aligned_cols=172 Identities=12% Similarity=-0.053 Sum_probs=113.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~ 74 (360)
||++++++|++ +|++|++++|++.... ....+++ ++.+|++|++++.++++.+ . ++|+|+|+|+.
T Consensus 17 iG~~~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~~Ag~ 88 (234)
T 2ehd_A 17 IGEATARLLHA------KGYRVGLMARDEKRLQALAAELEGAL-PLPGDVREEGDWARAVAAMEEAFG-ELSALVNNAGV 88 (234)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhhhce-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCc
Confidence 79999999999 8999999999753210 0012678 8999999999988877643 1 27999999985
Q ss_pred cCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 75 RLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 75 ~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
... +.+..+++|+.|+.++++++...++ ..+.++||++||...|...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~~----------------------- 144 (234)
T 2ehd_A 89 GVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALL-RRGGGTIVNVGSLAGKNPF----------------------- 144 (234)
T ss_dssp CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-TTTCEEEEEECCTTTTSCC-----------------------
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCcEEEEECCchhcCCC-----------------------
Confidence 321 2345789999999877777654332 1257899999997655310
Q ss_pred CCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 146 LPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
.+...|+.+|...+ ...+++++++||+.|..+.... .+ .. +
T Consensus 145 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------~~----~~---~- 195 (234)
T 2ehd_A 145 --KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN-------------------TP----GQ---A- 195 (234)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------------------
T ss_pred --CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc-------------------cc----cc---c-
Confidence 12345888776333 3468999999999886532100 00 00 0
Q ss_pred ccccccCHHHHHHHHHHHHcCC
Q 037566 216 HFCDMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~ 237 (360)
..++.+|+|+++++++..+
T Consensus 196 ---~~~~~~dvA~~~~~l~~~~ 214 (234)
T 2ehd_A 196 ---WKLKPEDVAQAVLFALEMP 214 (234)
T ss_dssp -----CCHHHHHHHHHHHHHSC
T ss_pred ---CCCCHHHHHHHHHHHhCCC
Confidence 1357899999999888654
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.36 E-value=4.3e-12 Score=114.46 Aligned_cols=199 Identities=15% Similarity=0.028 Sum_probs=128.7
Q ss_pred chHHHHHHHhcCCCCCCC--CcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGG--PWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~--g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||++++++|++ + |+.|++++|+..... ....++. ++.+|++|+++++++++.+ . ++|+++|+
T Consensus 14 IG~aia~~l~~------~g~~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lvnn 85 (254)
T 3kzv_A 14 IGKSIVDVLFS------LDKDTVVYGVARSEAPLKKLKEKYGDRFF-YVVGDITEDSVLKQLVNAAVKGHG-KIDSLVAN 85 (254)
T ss_dssp HHHHHHHHHHH------HCSSCEEEEEESCHHHHHHHHHHHGGGEE-EEESCTTSHHHHHHHHHHHHHHHS-CCCEEEEE
T ss_pred HHHHHHHHHHh------cCCCeEEEEecCCHHHHHHHHHHhCCceE-EEECCCCCHHHHHHHHHHHHHhcC-CccEEEEC
Confidence 79999999998 5 478988888753210 0124678 8999999999988877643 2 27999999
Q ss_pred eeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 72 MFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 72 A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
|+.... +.+..+++|+.|+.++++++...++.. + .+||++||...+..
T Consensus 86 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~-g~iv~isS~~~~~~-------------------- 143 (254)
T 3kzv_A 86 AGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-N-GNVVFVSSDACNMY-------------------- 143 (254)
T ss_dssp CCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCSCCCCS--------------------
T ss_pred CcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CeEEEEcCchhccC--------------------
Confidence 986321 234578999999999999995433211 3 68999998764421
Q ss_pred CCCCCCCCCCcHHHHHHHHh--------cCCCCcEEEEcCCCeeecCCCCcch-------hHHHHHHHHHHHhhcCCCee
Q 037566 142 DSLRLPFPNFYYAVEDIAAS--------YSPAVTYSVHRSSIIIGASSRSLNN-------SLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e--------~~~~~~~~ilRp~~vyGp~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 206 (360)
.+ +...|+.+|...+ +..++.+..++|+.|..+....... ....... +.+ ..|
T Consensus 144 ----~~-~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~-- 211 (254)
T 3kzv_A 144 ----FS-SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKM---FRG--LKE-- 211 (254)
T ss_dssp ----SC-CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHH---HHH--HHT--
T ss_pred ----CC-CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHH---HHH--HHh--
Confidence 01 2445888876544 3468999999999999875322110 0000111 111 011
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCCC---CCCCceeccCCCcc
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR---AKNQAFNCTNGDVF 252 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~---~~g~~yni~~g~~~ 252 (360)
...+.+.+|+|+++++++..+. ..|+.+++.+++..
T Consensus 212 ----------~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~~ 250 (254)
T 3kzv_A 212 ----------NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPALA 250 (254)
T ss_dssp ----------TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred ----------cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence 1234568889999988876442 45899998766643
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.4e-11 Score=112.50 Aligned_cols=207 Identities=10% Similarity=-0.037 Sum_probs=131.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC---------C-----------CCCCCCceeeEeeccCChHHHHHHHccC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP---------S-----------WFPSSHVDHYITFDALDSTDTTQKLSSI 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~---------~-----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~ 61 (360)
||++++++|++ +|++|++++|+... . .....++. ++.+|++|++++.++++.+
T Consensus 23 IG~a~a~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~ 95 (277)
T 3tsc_A 23 QGRAHAVRMAA------EGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIV-AAVVDTRDFDRLRKVVDDG 95 (277)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------cCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHH
Confidence 79999999999 99999999984210 0 00134678 8999999999988877642
Q ss_pred ----CCCccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcc
Q 037566 62 ----SQEVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSL 128 (360)
Q Consensus 62 ----~~~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~ 128 (360)
. ++|+++|+|+.... +.+..+++|+.|+.++++++...++....-.+||++||...+...
T Consensus 96 ~~~~g-~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 168 (277)
T 3tsc_A 96 VAALG-RLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ------ 168 (277)
T ss_dssp HHHHS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------
T ss_pred HHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC------
Confidence 2 27999999985322 234578999999999999976543211113589999987654310
Q ss_pred cCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHH
Q 037566 129 VGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATIC 198 (360)
Q Consensus 129 ~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~ 198 (360)
| ....|+.+|...+ ...|+.+..++|+.|..+..... .. ........
T Consensus 169 ------------------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~--~~~~~~~~ 225 (277)
T 3tsc_A 169 ------------------P-FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD--MV--TAVGQAME 225 (277)
T ss_dssp ------------------S-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH--HH--HHHHHHHH
T ss_pred ------------------C-CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch--hh--hhhhhccc
Confidence 1 1345888776443 34689999999999987642110 00 00010000
Q ss_pred hhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 199 RHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 199 ~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
. ........... .. .-+.+.+|+|+++++++..+. ..|++++|.+|.
T Consensus 226 ~-~~~~~~~~~~~---~p-~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 226 T-NPQLSHVLTPF---LP-DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp T-CGGGTTTTCCS---SS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred c-cHHHHHHhhhc---cC-CCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 0 00000000000 01 136789999999999885432 358999997764
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.6e-12 Score=116.02 Aligned_cols=194 Identities=11% Similarity=0.012 Sum_probs=126.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++++.... .....++. ++.+|++|+++++++++.+ . ++|+++
T Consensus 39 IG~aia~~la~------~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~lv 110 (267)
T 3u5t_A 39 IGAAIAARLAS------DGFTVVINYAGKAAAAEEVAGKIEAAGGKAL-TAQADVSDPAAVRRLFATAEEAFG-GVDVLV 110 (267)
T ss_dssp HHHHHHHHHHH------HTCEEEEEESSCSHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CEEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 899999886654321 00134678 8999999999988877643 2 289999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++ .-.+||++||...+...
T Consensus 111 nnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~------------------ 169 (267)
T 3u5t_A 111 NNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLR---VGGRIINMSTSQVGLLH------------------ 169 (267)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCTHHHHCC------------------
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---hCCeEEEEeChhhccCC------------------
Confidence 99985321 2345678999999999999987642 12589999987654310
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
| ....|+.+|...+ ...|+.+..++|+.|..+........ .....+. ...|
T Consensus 170 ------~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~~--~~~p------ 230 (267)
T 3u5t_A 170 ------P-SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSD----EVRDRFA--KLAP------ 230 (267)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---------------CHHHHH--TSST------
T ss_pred ------C-CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCH----HHHHHHH--hcCC------
Confidence 1 1345888776544 34689999999998876532111000 0000010 1112
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
...+...+|+|+++++++.... ..|++++|.+|
T Consensus 231 ------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 231 ------LERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp ------TCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred ------CCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 1235678999999998886432 25899988665
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.35 E-value=2.9e-12 Score=116.14 Aligned_cols=175 Identities=11% Similarity=-0.037 Sum_probs=116.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... . ....+++ ++.+|++|++++.++++.+ . .+|+|+|
T Consensus 41 IG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~lv~ 112 (262)
T 3rkr_A 41 IGAAIARKLGS------LGARVVLTARDVEKLRAVEREIVAAGGEAE-SHACDLSHSDAIAAFATGVLAAHG-RCDVLVN 112 (262)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHHHHHHHS-CCSEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHHhCCcee-EEEecCCCHHHHHHHHHHHHHhcC-CCCEEEE
Confidence 79999999999 899999999975321 0 0135688 9999999999988877653 2 2799999
Q ss_pred eeeec-CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQR-LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~-~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+.. .. +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 113 ~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 173 (262)
T 3rkr_A 113 NAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-KRGHIINISSLAGKNPV------------------ 173 (262)
T ss_dssp CCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCEEEEECSSCSSCCC------------------
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCC------------------
Confidence 99862 11 234578999999999999986532211 45799999987644210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+...|+.+|...+ ...++.+.+++|+.|..+-.... . ...+
T Consensus 174 -------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------------~---~~~~------ 225 (262)
T 3rkr_A 174 -------ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL------------S---AKKS------ 225 (262)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------
T ss_pred -------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc------------c---cccc------
Confidence 12345888776443 34689999999998865421100 0 0001
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~ 237 (360)
...++..+|+|+++++++..+
T Consensus 226 ------~~~~~~p~dvA~~v~~l~s~~ 246 (262)
T 3rkr_A 226 ------ALGAIEPDDIADVVALLATQA 246 (262)
T ss_dssp ---------CCCHHHHHHHHHHHHTCC
T ss_pred ------cccCCCHHHHHHHHHHHhcCc
Confidence 123457899999998887643
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.9e-11 Score=110.82 Aligned_cols=199 Identities=8% Similarity=-0.039 Sum_probs=130.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C---CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W---FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~---~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|+++++++++.+ . ++|+|
T Consensus 34 iG~~~a~~l~~------~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~id~l 105 (267)
T 3gdg_A 34 MGIEAARGCAE------MGAAVAITYASRAQGAEENVKELEKTYGIKAK-AYKCQVDSYESCEKLVKDVVADFG-QIDAF 105 (267)
T ss_dssp HHHHHHHHHHH------TSCEEEECBSSSSSHHHHHHHHHHHHHCCCEE-CCBCCTTCHHHHHHHHHHHHHHTS-CCSEE
T ss_pred hHHHHHHHHHH------CCCeEEEEeCCcchhHHHHHHHHHHhcCCcee-EEecCCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 79999999999 899999998875431 0 0135788 9999999999988877643 2 27999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+... .
T Consensus 106 i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~--------------~-- 168 (267)
T 3gdg_A 106 IANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-GTGSLVITASMSGHIAN--------------F-- 168 (267)
T ss_dssp EECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCC--------------S--
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-CCceEEEEccccccccC--------------C--
Confidence 999985321 234578999999999999985432211 34689999887544210 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+.+...|+.+|...+ ....+.+..+.|+.|..+-....... ...... ...|+
T Consensus 169 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~-----~~~~~~--~~~~~----- 229 (267)
T 3gdg_A 169 -------PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKE-----TQQLWH--SMIPM----- 229 (267)
T ss_dssp -------SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHH-----HHHHHH--TTSTT-----
T ss_pred -------CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHH-----HHHHHH--hcCCC-----
Confidence 112445888886544 12237888999988876432111111 011111 11121
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
..+.+.+|+|+++++++... ...|++++|.+|..
T Consensus 230 -------~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 230 -------GRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT 265 (267)
T ss_dssp -------SSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred -------CCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence 23455788999998887542 23589999987754
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=4.7e-12 Score=118.67 Aligned_cols=196 Identities=10% Similarity=0.034 Sum_probs=130.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEe-cCCCCC-----C---CCCCCceeeEeeccCChH-----------------HHH
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTA-RRPPPS-----W---FPSSHVDHYITFDALDST-----------------DTT 55 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~-r~~~~~-----~---~~~~~v~~~v~gDl~d~~-----------------~l~ 55 (360)
||++++++|++ +|++|++++ |+.... . ....++. ++.+|++|++ ++.
T Consensus 58 IG~aia~~La~------~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~ 130 (328)
T 2qhx_A 58 LGRSIAEGLHA------EGYAVCLHYHRSAAEANALSATLNARRPNSAI-TVQADLSNVATAPVSGADGSAPVTLFTRCA 130 (328)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE-EEECCCSSSCBCC-------CCBCHHHHHH
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEE-EEEeeCCCchhccccccccccccccHHHHH
Confidence 79999999999 899999999 764211 0 0124688 9999999998 888
Q ss_pred HHHccC----CCCccEEEEeeeecCC------C--------------h---hHhhhhhHHHHHHHHHHHHhhccCCCC--
Q 037566 56 QKLSSI----SQEVTHLFWVMFQRLK------S--------------E---EINISNNSTMFKNVMSVVVDSNKGRSR-- 106 (360)
Q Consensus 56 ~~l~~~----~~~v~~V~h~A~~~~~------~--------------~---~~~~~vNv~gt~nll~a~~~~~~~~~~-- 106 (360)
++++.+ . .+|+|||+|+.... + . +..+++|+.|+.++++++...++.. +
T Consensus 131 ~~~~~~~~~~g-~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~~ 208 (328)
T 2qhx_A 131 ELVAACYTHWG-RCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT-PAK 208 (328)
T ss_dssp HHHHHHHHHHS-CCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHS-CGG
T ss_pred HHHHHHHHhcC-CCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence 777633 1 17999999985321 1 2 2467999999999999987643211 2
Q ss_pred ----ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEc
Q 037566 107 ----LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHR 172 (360)
Q Consensus 107 ----v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilR 172 (360)
..+||++||...+.. .+ +...|+.+|...+ ...|+.+.+++
T Consensus 209 ~~~~~g~IV~isS~~~~~~------------------------~~-~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~ 263 (328)
T 2qhx_A 209 HRGTNYSIINMVDAMTNQP------------------------LL-GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVG 263 (328)
T ss_dssp GSCSCEEEEEECCTTTTSC------------------------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCCCCcEEEEECchhhccC------------------------CC-CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEe
Confidence 579999998754421 01 1345888776543 34589999999
Q ss_pred CCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 173 SSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 173 p~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
|+.|..+. .. ... ....+. ...|+ +. -+...+|+|+++++++..+ ...|+++++.+|.
T Consensus 264 PG~v~T~~-~~-~~~-----~~~~~~--~~~p~---~~--------r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 323 (328)
T 2qhx_A 264 PGLSVLVD-DM-PPA-----VWEGHR--SKVPL---YQ--------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 323 (328)
T ss_dssp ESSBSCCC-CS-CHH-----HHHHHH--TTCTT---TT--------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCcccCCc-cc-cHH-----HHHHHH--hhCCC---CC--------CCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 99998875 22 111 111111 12221 10 2356889999999888532 2358999997775
Q ss_pred c
Q 037566 251 V 251 (360)
Q Consensus 251 ~ 251 (360)
.
T Consensus 324 ~ 324 (328)
T 2qhx_A 324 S 324 (328)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.34 E-value=6.8e-12 Score=112.87 Aligned_cols=198 Identities=11% Similarity=0.017 Sum_probs=130.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccCC---------CC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSIS---------QE 64 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~---------~~ 64 (360)
||++++++|++ +|++|++++++.... .....++. ++.+|++|.+++.++++.+. .+
T Consensus 19 IG~~~a~~l~~------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (255)
T 3icc_A 19 IGRAIAKRLAN------DGALVAIHYGNRKEEAEETVYEIQSNGGSAF-SIGANLESLHGVEALYSSLDNELQNRTGSTK 91 (255)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCSHHHHHHHHHHHHTTCEEE-EEECCTTSHHHHHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHH------CCCeEEEEeCCchHHHHHHHHHHHhcCCceE-EEecCcCCHHHHHHHHHHHHHHhcccccCCc
Confidence 79999999999 899998875543221 00134677 89999999988877765421 01
Q ss_pred ccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCC
Q 037566 65 VTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 65 v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
+|+|+|+|+.... +.+..+++|+.|+.++++++...++ +-.+||++||...+...
T Consensus 92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~~~iv~isS~~~~~~~------------- 155 (255)
T 3icc_A 92 FDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR---DNSRIINISSAATRISL------------- 155 (255)
T ss_dssp EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---EEEEEEEECCGGGTSCC-------------
T ss_pred ccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC---CCCEEEEeCChhhccCC-------------
Confidence 7999999985321 2245689999999999999987532 23589999987654310
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCe
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (360)
| ....|+.+|...+ ...++.+..++|+.|..+............. ... ...++
T Consensus 156 -----------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~--~~~~~ 218 (255)
T 3icc_A 156 -----------P-DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQ---YAT--TISAF 218 (255)
T ss_dssp -----------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHH---HHH--HTSTT
T ss_pred -----------C-CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHH---hhh--ccCCc
Confidence 1 1345888776543 3468999999999998875432221111000 010 11121
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
..+.+.+|+|+++++++... ...|+++++.+|..
T Consensus 219 ------------~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~ 254 (255)
T 3icc_A 219 ------------NRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC 254 (255)
T ss_dssp ------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred ------------CCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence 23456889999998887532 34599999987753
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-11 Score=113.05 Aligned_cols=195 Identities=10% Similarity=0.012 Sum_probs=129.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCC-CCC-----C---CCCCCceeeEeeccCC----hHHHHHHHccC----CCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRP-PPS-----W---FPSSHVDHYITFDALD----STDTTQKLSSI----SQE 64 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~-~~~-----~---~~~~~v~~~v~gDl~d----~~~l~~~l~~~----~~~ 64 (360)
||++++++|++ +|++|++++|+. ... . ....++. ++.+|++| ++++.++++.+ . +
T Consensus 35 IG~aia~~L~~------~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~~~~~~~~~v~~~~~~~~~~~g-~ 106 (288)
T 2x9g_A 35 IGRAIAVKLHQ------TGYRVVIHYHNSAEAAVSLADELNKERSNTAV-VCQADLTNSNVLPASCEEIINSCFRAFG-R 106 (288)
T ss_dssp HHHHHHHHHHH------HTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE-EEECCCSCSTTHHHHHHHHHHHHHHHHS-C
T ss_pred HHHHHHHHHHH------CCCeEEEEeCCchHHHHHHHHHHHhhcCCceE-EEEeecCCccCCHHHHHHHHHHHHHhcC-C
Confidence 79999999999 899999999986 211 0 0134678 99999999 88887776632 2 2
Q ss_pred ccEEEEeeeecC----------------C---ChhHhhhhhHHHHHHHHHHHHhhccCCCC------ccEEEEeccCccc
Q 037566 65 VTHLFWVMFQRL----------------K---SEEINISNNSTMFKNVMSVVVDSNKGRSR------LRHVTLLMGTKHY 119 (360)
Q Consensus 65 v~~V~h~A~~~~----------------~---~~~~~~~vNv~gt~nll~a~~~~~~~~~~------v~r~v~~SS~~vY 119 (360)
+|+|||+|+... . +....+++|+.|+.++++++...++.. + ..+||++||...|
T Consensus 107 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~~~~~g~iv~isS~~~~ 185 (288)
T 2x9g_A 107 CDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGT-NPNCTSSNLSIVNLCDAMVD 185 (288)
T ss_dssp CCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC---------CCCEEEEEECCTTTT
T ss_pred CCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCCCCCCeEEEEEeccccc
Confidence 799999998532 1 123467999999999999988754311 2 4689999987654
Q ss_pred cccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHH
Q 037566 120 MGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLL 189 (360)
Q Consensus 120 g~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~ 189 (360)
.. .+ +...|+.+|...+ ...|+.+.+++|+.|+++. .. ...
T Consensus 186 ~~------------------------~~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~-~~~-- 236 (288)
T 2x9g_A 186 QP------------------------CM-AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM-GEE-- 236 (288)
T ss_dssp SC------------------------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS-CHH--
T ss_pred CC------------------------CC-CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc-ChH--
Confidence 21 01 2345888885433 3458999999999999985 21 111
Q ss_pred HHHHHHHHHhhcCCCeeeeCCcccccccccc-cCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 190 TLAVYATICRHQGLPFRYLGNKYTWEHFCDM-SDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~-~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
....+. ...|+ + -+ ...+|+|+++++++... ...|+.+++.+|..
T Consensus 237 ---~~~~~~--~~~p~---~---------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 284 (288)
T 2x9g_A 237 ---EKDKWR--RKVPL---G---------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284 (288)
T ss_dssp ---HHHHHH--HTCTT---T---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ---HHHHHH--hhCCC---C---------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence 001111 11221 1 13 56889999999887532 23589998877654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-12 Score=118.62 Aligned_cols=173 Identities=10% Similarity=-0.015 Sum_probs=120.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|++.... . ...++. ++.+|++|++++.++++.+ .. +|+|+|
T Consensus 43 IG~~la~~L~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g~-iD~li~ 114 (272)
T 1yb1_A 43 IGRLTAYEFAK------LKSKLVLWDINKHGLEETAAKCKGLGAKVH-TFVVDCSNREDIYSSAKKVKAEIGD-VSILVN 114 (272)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHTCC-CSEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEEcCHHHHHHHHHHHHhcCCeEE-EEEeeCCCHHHHHHHHHHHHHHCCC-CcEEEE
Confidence 79999999999 8999999999753210 0 134688 9999999999988877632 22 799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +....+++|+.|+.++++++...++. .+..+||++||...|...
T Consensus 115 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~------------------- 174 (272)
T 1yb1_A 115 NAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTK-NNHGHIVTVASAAGHVSV------------------- 174 (272)
T ss_dssp CCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEEEEECCCC-CCCH-------------------
T ss_pred CCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCEEEEEechhhcCCC-------------------
Confidence 9985321 23457899999999988887653221 156899999998665310
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------c---CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------Y---SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~---~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
+ +...|+.+|...+ . ..++.++++||+.|.++.... . . .
T Consensus 175 -----~-~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~--~-~-----------------~-- 226 (272)
T 1yb1_A 175 -----P-FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--P-S-----------------T-- 226 (272)
T ss_dssp -----H-HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--T-H-----------------H--
T ss_pred -----C-CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--c-c-----------------c--
Confidence 0 1345887776544 1 458999999999998764211 0 0 0
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~ 237 (360)
....+.+.+|+|++++.++..+
T Consensus 227 -------~~~~~~~~~dva~~i~~~~~~~ 248 (272)
T 1yb1_A 227 -------SLGPTLEPEEVVNRLMHGILTE 248 (272)
T ss_dssp -------HHCCCCCHHHHHHHHHHHHHTT
T ss_pred -------cccCCCCHHHHHHHHHHHHHcC
Confidence 0123467889999999888653
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.33 E-value=4e-12 Score=116.21 Aligned_cols=199 Identities=11% Similarity=0.072 Sum_probs=128.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccC---CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSI---SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~---~~~v~~V~h~ 71 (360)
||++++++|++ +|++|++++|++.... ....++. ++.+|++|.+++.++++.+ . ++|+++|+
T Consensus 45 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~g-~iD~lvnn 116 (275)
T 4imr_A 45 IGAAIAEGLAG------AGAHVILHGVKPGSTAAVQQRIIASGGTAQ-ELAGDLSEAGAGTDLIERAEAIA-PVDILVIN 116 (275)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSTTTTHHHHHHHHHTTCCEE-EEECCTTSTTHHHHHHHHHHHHS-CCCEEEEC
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCHHHHHHHHHHHHhcCCeEE-EEEecCCCHHHHHHHHHHHHHhC-CCCEEEEC
Confidence 79999999999 9999999999765420 0135688 9999999998887776532 1 27999999
Q ss_pred eeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 72 MFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 72 A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+..
T Consensus 117 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~--------------------- 174 (275)
T 4imr_A 117 ASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-KWGRVVSIGSINQLRP--------------------- 174 (275)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC---------------------
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCCC---------------------
Confidence 985321 234578999999999999986532211 3568999998754421
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
. .+...|+.+|...+ ...++.+..++|+.|..+........ .. ..+..+.+.. .|+ |
T Consensus 175 --~--~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~-~~~~~~~~~~-~p~---~--- 241 (275)
T 4imr_A 175 --K--SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQ-DP-EGWDEYVRTL-NWM---G--- 241 (275)
T ss_dssp --C--TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHH-CH-HHHHHHHHHH-STT---C---
T ss_pred --C--CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccccccc-Ch-HHHHHHHhhc-Ccc---C---
Confidence 0 12345888776443 34589999999999976521110000 00 0011111100 011 1
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
-+...+|+|+++++++... ...|++++|.+|
T Consensus 242 ------r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 242 ------RAGRPEEMVGAALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp ------SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred ------CCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence 1345778899888887532 235899998765
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-11 Score=113.55 Aligned_cols=187 Identities=11% Similarity=0.030 Sum_probs=123.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCC--------------CCCCceeeEeeccCChHHHHHHHccC----CC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWF--------------PSSHVDHYITFDALDSTDTTQKLSSI----SQ 63 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~--------------~~~~v~~~v~gDl~d~~~l~~~l~~~----~~ 63 (360)
||++++++|++ +|++|++++|+...... ...++. ++.+|++|++++.++++.+ .
T Consensus 21 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g- 92 (285)
T 3sc4_A 21 IGLAIAKRVAA------DGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQAL-PIVGDIRDGDAVAAAVAKTVEQFG- 92 (285)
T ss_dssp HHHHHHHHHHT------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEE-EEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHH------CCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHHcC-
Confidence 79999999999 89999999998653100 124678 8999999999988877643 1
Q ss_pred CccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCC
Q 037566 64 EVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIG 134 (360)
Q Consensus 64 ~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~ 134 (360)
++|+++|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 93 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~------------ 159 (285)
T 3sc4_A 93 GIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-DNPHILTLSPPIRLEPK------------ 159 (285)
T ss_dssp CCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-SSCEEEECCCCCCCSGG------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECChhhccCC------------
Confidence 27999999985321 234577899999999999998765422 35699999987543210
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCC
Q 037566 135 HDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLP 204 (360)
Q Consensus 135 ~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (360)
..+...|+.+|...+ ...|+.+..++|+.+.. . .+.. .. .+..
T Consensus 160 ------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~----t--~~~~------~~---~~~~ 212 (285)
T 3sc4_A 160 ------------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVA----T--AAVQ------NL---LGGD 212 (285)
T ss_dssp ------------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBC----C--HHHH------HH---HTSC
T ss_pred ------------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccc----c--HHHH------hh---cccc
Confidence 001345888776443 34689999999974321 1 1110 01 1111
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCCC-CCCCceec
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR-AKNQAFNC 246 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~-~~g~~yni 246 (360)
.+ ..-+...+|+|+++++++..+. ..|+.+.+
T Consensus 213 ~~----------~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~ 245 (285)
T 3sc4_A 213 EA----------MARSRKPEVYADAAYVVLNKPSSYTGNTLLC 245 (285)
T ss_dssp CC----------CTTCBCTHHHHHHHHHHHTSCTTCCSCEEEH
T ss_pred cc----------ccCCCCHHHHHHHHHHHhCCcccccceEEEE
Confidence 11 1124568899999998886542 23555544
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=8.3e-12 Score=111.22 Aligned_cols=184 Identities=10% Similarity=0.005 Sum_probs=126.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC------CCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI------SQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~------~~~v~~V~h~A~~~ 75 (360)
||++++++|++ +|++|++++|++... ..... ++.+|++|++++.++++.+ . ++|+|+|+|+..
T Consensus 15 IG~~~a~~l~~------~G~~V~~~~r~~~~~---~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~g-~id~lv~~Ag~~ 83 (236)
T 1ooe_A 15 LGSAILEFFKK------NGYTVLNIDLSANDQ---ADSNI-LVDGNKNWTEQEQSILEQTASSLQGS-QVDGVFCVAGGW 83 (236)
T ss_dssp HHHHHHHHHHH------TTEEEEEEESSCCTT---SSEEE-ECCTTSCHHHHHHHHHHHHHHHHTTC-CEEEEEECCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEecCcccc---ccccE-EEeCCCCCHHHHHHHHHHHHHHhCCC-CCCEEEECCccc
Confidence 79999999999 899999999986542 23456 8899999999888777632 2 289999999853
Q ss_pred C------C----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 76 L------K----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 76 ~------~----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
. . +.+..+++|+.|+.++++++...++ .-.+||++||...|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~------------------------ 136 (236)
T 1ooe_A 84 AGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK---PGGLLQLTGAAAAMGP------------------------ 136 (236)
T ss_dssp CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCGGGGSC------------------------
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc---cCCEEEEECchhhccC------------------------
Confidence 2 1 2345789999999999999987632 1258999998765421
Q ss_pred CCCCCCcHHHHHHHHh----------c--CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 146 LPFPNFYYAVEDIAAS----------Y--SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~--~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
.+ +...|+.+|...+ . ..++.++++||+.|.++.. . .. ....
T Consensus 137 ~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~-------~------~~---~~~~--------- 190 (236)
T 1ooe_A 137 TP-SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN-------R------KW---MPNA--------- 190 (236)
T ss_dssp CT-TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH-------H------HH---STTC---------
T ss_pred CC-CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch-------h------hc---CCCc---------
Confidence 01 2445888776544 2 4579999999999877520 0 00 1110
Q ss_pred ccccccccCHHHHHHHHHHHHcCC---CCCCCceeccCCCc
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD---RAKNQAFNCTNGDV 251 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~---~~~g~~yni~~g~~ 251 (360)
.....+..+|+|++++..+..+ ...|+.+++.+|..
T Consensus 191 --~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~~ 229 (236)
T 1ooe_A 191 --DHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTENG 229 (236)
T ss_dssp --CGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred --cccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCCC
Confidence 0112456789999987555332 23488888876653
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.31 E-value=8e-12 Score=112.64 Aligned_cols=182 Identities=8% Similarity=-0.053 Sum_probs=113.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccC---CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSI---SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~---~~~v~~V~h~ 71 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ . ++|+++|+
T Consensus 19 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~g-~id~lv~n 90 (252)
T 3h7a_A 19 IGAEIAKKFAA------EGFTVFAGRRNGEKLAPLVAEIEAAGGRIV-ARSLDARNEDEVTAFLNAADAHA-PLEVTIFN 90 (252)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSGGGGHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHHHHHHS-CEEEEEEC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECcCCCHHHHHHHHHHHHhhC-CceEEEEC
Confidence 79999999999 8999999999764310 0134688 9999999999988877643 2 28999999
Q ss_pred eeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 72 MFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 72 A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+.... +.+..+++|+.|+.++++++...++.. +-.+||++||...+..
T Consensus 91 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~--------------------- 148 (252)
T 3h7a_A 91 VGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-GQGKIFFTGATASLRG--------------------- 148 (252)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTCC---------------------
T ss_pred CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHHcCC---------------------
Confidence 985321 234578999999999999986543211 3468999998754321
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcE-EEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTY-SVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~-~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
.+ ....|+.+|...+ ...|+.+ .++.|+.|..+........ ... . ....
T Consensus 149 ---~~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~-----~~~--------~---~~~~ 208 (252)
T 3h7a_A 149 ---GS-GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQ-----MFG--------K---DALA 208 (252)
T ss_dssp ---CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------------
T ss_pred ---CC-CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchh-----hhh--------h---hhhc
Confidence 01 1345888775443 3468888 7899988866532111000 000 0 0000
Q ss_pred ccccccccccCHHHHHHHHHHHHcCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~ 237 (360)
.... +.+.+|+|+++++++..+
T Consensus 209 ---~~~~-~~~pedvA~~~~~l~s~~ 230 (252)
T 3h7a_A 209 ---NPDL-LMPPAAVAGAYWQLYQQP 230 (252)
T ss_dssp ---------CCHHHHHHHHHHHHHCC
T ss_pred ---CCcc-CCCHHHHHHHHHHHHhCc
Confidence 0112 677999999999988754
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-11 Score=110.77 Aligned_cols=193 Identities=10% Similarity=-0.006 Sum_probs=123.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C---CCCCceeeEeecc--CChHHHHHHHccC----CCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F---PSSHVDHYITFDA--LDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~---~~~~v~~~v~gDl--~d~~~l~~~l~~~----~~~v~~ 67 (360)
||++++++|++ +|++|++++|+..... . ...++. ++.+|+ +|.+++.++++.+ . .+|+
T Consensus 24 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~g-~id~ 95 (252)
T 3f1l_A 24 IGREAAMTYAR------YGATVILLGRNEEKLRQVASHINEETGRQPQ-WFILDLLTCTSENCQQLAQRIAVNYP-RLDG 95 (252)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHHSCCCE-EEECCTTTCCHHHHHHHHHHHHHHCS-CCSE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhhcCCCce-EEEEecccCCHHHHHHHHHHHHHhCC-CCCE
Confidence 79999999999 8999999999753210 0 123678 899999 8898887776532 2 2799
Q ss_pred EEEeeeecC---C----C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 68 LFWVMFQRL---K----S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 68 V~h~A~~~~---~----~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+|+|+... . + .+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 96 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~--------------- 159 (252)
T 3f1l_A 96 VLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-DAGSLVFTSSSVGRQGR--------------- 159 (252)
T ss_dssp EEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGTSCC---------------
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-CCCEEEEECChhhccCC---------------
Confidence 999998531 1 2 24578999999999999986543312 45799999987544210
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
+ +...|+.+|...+ ....+.+..+.|+.|..+ + .. ......
T Consensus 160 ---------~-~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~-----~--~~---------~~~~~~---- 209 (252)
T 3f1l_A 160 ---------A-NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA-----M--RA---------SAFPTE---- 209 (252)
T ss_dssp ---------T-TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH-----H--HH---------HHCTTC----
T ss_pred ---------C-CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc-----h--hh---------hhCCcc----
Confidence 1 1345888776544 223388888888777432 1 00 001100
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcccHH
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWK 255 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s~~ 255 (360)
....+...+|+|+++++++..+ ...|+.+++.+|...++.
T Consensus 210 -------~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~ 251 (252)
T 3f1l_A 210 -------DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS 251 (252)
T ss_dssp -------CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred -------chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence 0112456778888888887543 235899999988876654
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=2.8e-11 Score=107.55 Aligned_cols=187 Identities=14% Similarity=-0.012 Sum_probs=123.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C---CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W---FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~---~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 14 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~li 85 (235)
T 3l77_A 14 IGEAIARALAR------DGYALALGARSVDRLEKIAHELMQEQGVEVF-YHHLDVSKAESVEEFSKKVLERFG-DVDVVV 85 (235)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHHCCCEE-EEECCTTCHHHHHHHCC-HHHHHS-SCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhhcCCeEE-EEEeccCCHHHHHHHHHHHHHhcC-CCCEEE
Confidence 79999999999 899999999975321 0 0135688 9999999999998887643 1 279999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+|+.... +.+..+++|+.|+.++++++...++ .+-.++|++||+..+.. .
T Consensus 86 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~~ii~~sS~~~~~~---------------~--- 145 (235)
T 3l77_A 86 ANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLK--RTGGLALVTTSDVSARL---------------I--- 145 (235)
T ss_dssp ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHTCEEEEECCGGGSSC---------------C---
T ss_pred ECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCcEEEEecchhccc---------------C---
Confidence 99985321 2345789999999999999876421 12346677666543210 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh--------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS--------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e--------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
| ....|+.+|...+ ...++.+..++|+.|-.+-... .+ +..
T Consensus 146 ------~-~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~-------------------~~----~~~- 194 (235)
T 3l77_A 146 ------P-YGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS-------------------KP----GKP- 194 (235)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC-------------------CS----CCC-
T ss_pred ------C-CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc-------------------cC----Ccc-
Confidence 1 1235888776554 4568999999998885532111 00 000
Q ss_pred cccccccccCHHHHHHHHHHHHcCCCC--CCCceeccCCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTDRA--KNQAFNCTNGD 250 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~~~--~g~~yni~~g~ 250 (360)
....+...+|+|+++++++..+.. .|++.....+.
T Consensus 195 ---~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~~~ 231 (235)
T 3l77_A 195 ---KEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSVYQ 231 (235)
T ss_dssp ---GGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCTTS
T ss_pred ---cccCCCCHHHHHHHHHHHHcCCCCCccceEEEeeccc
Confidence 112456789999999998876543 36655444443
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.30 E-value=6.1e-12 Score=114.06 Aligned_cols=197 Identities=9% Similarity=-0.066 Sum_probs=123.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
||++++++|++ +|++|++++|...+. .....++. ++.+|++|+++++++++.+ . ++|+
T Consensus 23 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~ 94 (262)
T 3ksu_A 23 LGALTAKTFAL------ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVA-LYQSDLSNEEEVAKLFDFAEKEFG-KVDI 94 (262)
T ss_dssp HHHHHHHHHTT------SSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEE-EEECCCCSHHHHHHHHHHHHHHHC-SEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEecCccCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHHcC-CCCE
Confidence 79999999999 999999998753220 01135678 8999999999988877633 2 2899
Q ss_pred EEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 68 LFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 68 V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
++|+|+.... +.+..+++|+.|+.++++++...++ +-.+||++||...+... +
T Consensus 95 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~g~iv~isS~~~~~~~------------~--- 156 (262)
T 3ksu_A 95 AINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN---PNGHIITIATSLLAAYT------------G--- 156 (262)
T ss_dssp EEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE---EEEEEEEECCCHHHHHH------------C---
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc---CCCEEEEEechhhccCC------------C---
Confidence 9999985321 2345778999999999999987542 34689999998766421 0
Q ss_pred CCCCCCCCCCCCCcHHHHHHH--------Hh--cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIA--------AS--YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l--------~e--~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
....|+.+|.. +. ...++.+..++|+.|..+......... ...... ...
T Consensus 157 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~----~~~~~~--~~~----- 215 (262)
T 3ksu_A 157 ----------FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKE----STAFHK--SQA----- 215 (262)
T ss_dssp ----------CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-----------------------
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchH----HHHHHH--hcC-----
Confidence 01225554432 22 456899999999888654210000000 000000 001
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC-CCCCCceeccCCCcc
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD-RAKNQAFNCTNGDVF 252 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~-~~~g~~yni~~g~~~ 252 (360)
....+...+|+|+++++++... ...|+.++|.+|...
T Consensus 216 -------~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~ 253 (262)
T 3ksu_A 216 -------MGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYTT 253 (262)
T ss_dssp -------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCC
T ss_pred -------cccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCccC
Confidence 1123456788999988887642 234899999766544
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.5e-13 Score=128.95 Aligned_cols=149 Identities=10% Similarity=0.046 Sum_probs=100.7
Q ss_pred CchHHHHHHHhcCCCCCCCCc-------EEEEEecCCC----CC---CCCCCCceeeEeeccCChHHHHHHHccCCCCcc
Q 037566 1 MAGLSLAEALKNNPTIPGGPW-------KVYGTARRPP----PS---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVT 66 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~-------~V~~l~r~~~----~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~ 66 (360)
+||++|+.+|++ +|+ +|+++++.+. .. .+.+..+. ++ +|+++.+++.+++++ +|
T Consensus 15 fIG~~l~~~L~~------~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~-~~-~di~~~~~~~~a~~~----~D 82 (327)
T 1y7t_A 15 QIGYSLLFRIAA------GEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFP-LL-AGLEATDDPKVAFKD----AD 82 (327)
T ss_dssp HHHHHHHHHHHT------TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT-TE-EEEEEESCHHHHTTT----CS
T ss_pred HHHHHHHHHHHh------CCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccc-cc-CCeEeccChHHHhCC----CC
Confidence 589999999998 775 8999998641 00 01112345 55 799887778888887 48
Q ss_pred EEEEeeeecC---CChhHhhhhhHHHHHHHHHHHHhhccCCCCcc-EEEEeccCccccccccCCcccCCcCCCCCCCC-C
Q 037566 67 HLFWVMFQRL---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLR-HVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK-E 141 (360)
Q Consensus 67 ~V~h~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~-r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~-E 141 (360)
+|||+|+... .++.+++++|+.+|+++++++++. + +++ +|++.|+...-. .++. |
T Consensus 83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~---~-~~~~~vvv~snp~~~~----------------~~~~~~ 142 (327)
T 1y7t_A 83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV---A-KKDVKVLVVGNPANTN----------------ALIAYK 142 (327)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH---S-CTTCEEEECSSSHHHH----------------HHHHHH
T ss_pred EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh---c-CCCeEEEEeCCchhhh----------------HHHHHH
Confidence 9999998542 356789999999999999999987 3 143 666666542100 1111 2
Q ss_pred CCCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCC
Q 037566 142 DSLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSR 182 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~ 182 (360)
..+.. .|...|+.+|+..| +..|++.+++||++||||...
T Consensus 143 ~~~~~-~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 143 NAPGL-NPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp TCTTS-CGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred HcCCC-ChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 22111 13444666665444 345899999999999998754
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1e-11 Score=111.63 Aligned_cols=196 Identities=14% Similarity=0.052 Sum_probs=125.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccCCC---CccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSISQ---EVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~~~---~v~~V~h~A~ 73 (360)
.||++++++|++ +|++|++++|++.... ....++. ++.+|++|++++.++++.+.. ++|+|+|+|+
T Consensus 11 gIG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg 83 (248)
T 3asu_A 11 GFGECITRRFIQ------QGHKVIATGRRQERLQELKDELGDNLY-IAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAG 83 (248)
T ss_dssp TTHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCC
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHhcCceE-EEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 489999999999 8999999999753210 0024678 899999999999998875411 2899999998
Q ss_pred ecC--C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 74 QRL--K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 74 ~~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
... . +.+..+++|+.|+.++++++...++.. +..+||++||...+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~---------------------- 140 (248)
T 3asu_A 84 LALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGSWP---------------------- 140 (248)
T ss_dssp CCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSC----------------------
T ss_pred cCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEccchhccC----------------------
Confidence 531 1 234578999999999999987533211 4579999998754421
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeee-cCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIG-ASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyG-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
.+ +...|+.+|...+ ...|+.+.+++|+.|.| +........ . .... ... +.
T Consensus 141 --~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~-~----~~~~-----~~~-~~---- 202 (248)
T 3asu_A 141 --YA-GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG-D----DGKA-----EKT-YQ---- 202 (248)
T ss_dssp --CT-TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------------------
T ss_pred --CC-CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccC-c----hHHH-----HHH-Hh----
Confidence 01 1345888776443 34689999999999985 321100000 0 0000 000 00
Q ss_pred cccccccccCHHHHHHHHHHHHcCCC-CCCCceeccC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTDR-AKNQAFNCTN 248 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~~-~~g~~yni~~ 248 (360)
.....+.+|+|+++++++..+. ..|+...+..
T Consensus 203 ----~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~ 235 (248)
T 3asu_A 203 ----NTVALTPEDVSEAVWWVSTLPAHVNINTLEMMP 235 (248)
T ss_dssp ------CCBCHHHHHHHHHHHHHSCTTCCCCEEEECC
T ss_pred ----ccCCCCHHHHHHHHHHHhcCCccceeeEEEEcc
Confidence 0123578999999998886532 2356665543
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=9.1e-12 Score=112.30 Aligned_cols=198 Identities=12% Similarity=0.026 Sum_probs=122.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----C--CCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----F--PSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~--~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h 70 (360)
.||++++++|++ +|++|++++|++.... + ...++. .+ | ++++.++++ .... +|+|+|
T Consensus 12 gIG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~--d---~~~v~~~~~~~~~~~g~-iD~lv~ 78 (254)
T 1zmt_A 12 FGGMGSALRLSE------AGHTVACHDESFKQKDELEAFAETYPQLK-PM--S---EQEPAELIEAVTSAYGQ-VDVLVS 78 (254)
T ss_dssp TTHHHHHHHHHH------TTCEEEECCGGGGSHHHHHHHHHHCTTSE-EC--C---CCSHHHHHHHHHHHHSC-CCEEEE
T ss_pred hHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHhcCCcEE-EE--C---HHHHHHHHHHHHHHhCC-CCEEEE
Confidence 489999999999 8999999999754310 0 012233 33 4 444443333 2222 799999
Q ss_pred eeeec-CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQR-LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~-~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+.. .. +.+..+++|+.|+.++++++...++.. +..+||++||...|...
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 139 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSATPFGPW------------------ 139 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCSTTTSCC------------------
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCcccccCC------------------
Confidence 99864 21 234578999999999999986533211 35699999987654210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHH--HH-HHHHHHHhhcCCCeee
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLL--TL-AVYATICRHQGLPFRY 207 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 207 (360)
+ +...|+.+|...+ ...++.+.+++|+.|+||........-. .. .....+.+ ..|+
T Consensus 140 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~--~~p~-- 208 (254)
T 1zmt_A 140 ------K-ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK--VTAL-- 208 (254)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH--HSSS--
T ss_pred ------C-CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhc--cCCC--
Confidence 1 1345888776543 3458999999999999987543221100 00 00000100 1111
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
..+.+.+|+|+++++++..+. ..|+.+++.+|..
T Consensus 209 ----------~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 209 ----------QRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP 244 (254)
T ss_dssp ----------SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred ----------CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCch
Confidence 124578999999998876433 3589999977753
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.27 E-value=8e-12 Score=114.91 Aligned_cols=199 Identities=12% Similarity=0.073 Sum_probs=130.3
Q ss_pred chHHHHHHHhcCCCCCCCCc---EEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccCCC---Ccc
Q 037566 2 AGLSLAEALKNNPTIPGGPW---KVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSISQ---EVT 66 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~---~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~---~v~ 66 (360)
||++++++|++ +|+ .|++++|+.... .....++. ++.+|++|+++++++++.+.. ++|
T Consensus 45 IG~aia~~l~~------~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g~iD 117 (287)
T 3rku_A 45 IGKATALEYLE------ASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH-VAQLDITQAEKIKPFIENLPQEFKDID 117 (287)
T ss_dssp HHHHHHHHHHH------HHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEE-EEECCTTCGGGHHHHHHTSCGGGCSCC
T ss_pred HHHHHHHHHHH------cCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEE-EEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 79999999998 787 999999875321 00134678 899999999999998876521 289
Q ss_pred EEEEeeeecC-C---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 67 HLFWVMFQRL-K---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 67 ~V~h~A~~~~-~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
+|+|+|+... . +.+..+++|+.|+.++++++...++.. +..+||++||...+..
T Consensus 118 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~--------------- 181 (287)
T 3rku_A 118 ILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNLGSIAGRDA--------------- 181 (287)
T ss_dssp EEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSC---------------
T ss_pred EEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEECChhhcCC---------------
Confidence 9999998532 1 234678999999999999986432211 4578999998754421
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
.+ ....|+.+|...+ ...|+.+..++|+.|..+.......... -.....+ ...
T Consensus 182 ---------~~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~~~~---~~~--- 244 (287)
T 3rku_A 182 ---------YP-TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNE-EQAKNVY---KDT--- 244 (287)
T ss_dssp ---------CT-TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCH-HHHHHHH---TTS---
T ss_pred ---------CC-CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcH-HHHHHhh---ccc---
Confidence 01 1345888775443 3568999999999997752100000000 0000000 000
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCCCC--CCCceeccCCCcc
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRA--KNQAFNCTNGDVF 252 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~--~g~~yni~~g~~~ 252 (360)
.....+|+|+++++++..+.. .|+++++.+|+..
T Consensus 245 ------------~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~~ 280 (287)
T 3rku_A 245 ------------TPLMADDVADLIVYATSRKQNTVIADTLIFPTNQAS 280 (287)
T ss_dssp ------------CCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEEE
T ss_pred ------------CCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCCC
Confidence 112588999999998865433 3888988777643
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.5e-11 Score=111.75 Aligned_cols=195 Identities=10% Similarity=-0.013 Sum_probs=121.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|+.... . ....++. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 16 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lVn 87 (264)
T 3tfo_A 16 IGEGIARELGV------AGAKILLGARRQARIEAIATEIRDAGGTAL-AQVLDVTDRHSVAAFAQAAVDTWG-RIDVLVN 87 (264)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 999999999975321 0 0134677 8999999999988877633 2 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 88 nAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~------------------- 147 (264)
T 3tfo_A 88 NAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGSIGALSVV------------------- 147 (264)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCC-------------------
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEEcCHHHcccC-------------------
Confidence 9985321 234578999999999999886543211 35689999987654210
Q ss_pred CCCCCCCCCCcHHHHHHHHh--------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS--------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e--------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
+ ....|+.+|...+ +..++.+..++|+.|..+-....... .... ....
T Consensus 148 -----~-~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~-------------~~~~--~~~~--- 203 (264)
T 3tfo_A 148 -----P-TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHE-------------ETMA--AMDT--- 203 (264)
T ss_dssp -----T-TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------------------
T ss_pred -----C-CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccch-------------hHHH--HHHh---
Confidence 1 1345888876443 22489999999998876532111000 0000 0000
Q ss_pred ccccccccCHHHHHHHHHHHHcCCCCC--CCceeccCCC
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDRAK--NQAFNCTNGD 250 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~~~--g~~yni~~g~ 250 (360)
........+|+|+++++++..+... |++.....+.
T Consensus 204 --~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~p~~~ 240 (264)
T 3tfo_A 204 --YRAIALQPADIARAVRQVIEAPQSVDTTEITIRPTAS 240 (264)
T ss_dssp ------CCCHHHHHHHHHHHHHSCTTEEEEEEEEEECC-
T ss_pred --hhccCCCHHHHHHHHHHHhcCCccCccceEEEecCcc
Confidence 0011357899999999988765432 4555333333
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=2.9e-11 Score=108.09 Aligned_cols=184 Identities=12% Similarity=0.020 Sum_probs=126.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC------CCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI------SQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~------~~~v~~V~h~A~~~ 75 (360)
||++++++|++ +|++|++++|++... ..... ++.+|++|++++.++++.+ . ++|+|+|+|+..
T Consensus 19 IG~~ia~~l~~------~G~~V~~~~r~~~~~---~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~~g-~iD~lv~~Ag~~ 87 (241)
T 1dhr_A 19 LGSRCVQAFRA------RNWWVASIDVVENEE---ASASV-IVKMTDSFTEQADQVTAEVGKLLGDQ-KVDAILCVAGGW 87 (241)
T ss_dssp HHHHHHHHHHT------TTCEEEEEESSCCTT---SSEEE-ECCCCSCHHHHHHHHHHHHHHHHTTC-CEEEEEECCCCC
T ss_pred HHHHHHHHHHh------CCCEEEEEeCChhhc---cCCcE-EEEcCCCCHHHHHHHHHHHHHHhCCC-CCCEEEEccccc
Confidence 79999999999 899999999986542 23456 8899999999988877632 2 289999999853
Q ss_pred C------C----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 76 L------K----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 76 ~------~----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
. . +.+..+++|+.|+.++++++...++ .-.+||++||...|...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~----------------------- 141 (241)
T 1dhr_A 88 AGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK---EGGLLTLAGAKAALDGT----------------------- 141 (241)
T ss_dssp CCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCGGGGSCC-----------------------
T ss_pred CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhc---cCCEEEEECCHHHccCC-----------------------
Confidence 2 1 2345789999999999999987642 12589999987654310
Q ss_pred CCCCCCcHHHHHHHHh----------c--CCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 146 LPFPNFYYAVEDIAAS----------Y--SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~--~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
+ +...|+.+|...+ . ..++.+.+++|+.|-.+. . . .. ....
T Consensus 142 -~-~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~-----~--~------~~---~~~~--------- 194 (241)
T 1dhr_A 142 -P-GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-----N--R------KS---MPEA--------- 194 (241)
T ss_dssp -T-TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-----H--H------HH---STTS---------
T ss_pred -C-CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc-----c--c------cc---Ccch---------
Confidence 1 2345888886544 2 457999999998875431 0 0 00 0100
Q ss_pred ccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
.....+..+|+|+++++++.... ..|+.+++.++..
T Consensus 195 --~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~~ 232 (241)
T 1dhr_A 195 --DFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTDG 232 (241)
T ss_dssp --CGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEETT
T ss_pred --hhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCCC
Confidence 01123456899999988875432 3488888866553
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.9e-11 Score=111.72 Aligned_cols=142 Identities=14% Similarity=0.041 Sum_probs=101.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|++.... .....+. ++.+|++|++++.++++.+ . ++|+|
T Consensus 44 IG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~v 115 (279)
T 1xg5_A 44 IGAAVARALVQ------QGLKVVGCARTVGNIEELAAECKSAGYPGTLI-PYRCDLSNEEDILSMFSAIRSQHS-GVDIC 115 (279)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCSSEEE-EEECCTTCHHHHHHHHHHHHHHHC-CCSEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECChHHHHHHHHHHHhcCCCceEE-EEEecCCCHHHHHHHHHHHHHhCC-CCCEE
Confidence 79999999999 8999999999743210 0113577 8999999999988877632 1 17999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHH----HHHHHHHHHhhccCCCCc--cEEEEeccCccccccccCCcccCCcC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTM----FKNVMSVVVDSNKGRSRL--RHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~g----t~nll~a~~~~~~~~~~v--~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
||+|+.... +.+..+++|+.| ++++++++++. ++ .+||++||...|+.
T Consensus 116 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-----~~~~g~iv~isS~~~~~~------------ 178 (279)
T 1xg5_A 116 INNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-----NVDDGHIININSMSGHRV------------ 178 (279)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCCSCEEEEECCGGGTSC------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCCceEEEEcChhhccc------------
Confidence 999985321 234578999999 66666666654 44 79999999866531
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------c--CCCCcEEEEcCCCeeec
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------Y--SPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~--~~~~~~~ilRp~~vyGp 179 (360)
.| . .+...|+.+|...+ . ..++++.+++|+.|.++
T Consensus 179 ---~~------~--~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 225 (279)
T 1xg5_A 179 ---LP------L--SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ 225 (279)
T ss_dssp ---CS------C--GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred ---CC------C--CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccch
Confidence 00 0 12345887776543 2 57899999999999765
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=8e-12 Score=112.22 Aligned_cols=144 Identities=14% Similarity=0.031 Sum_probs=103.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F--PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~--~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|++.... + ...++. ++.+|++|++++.++++.+ . ++|+|+|
T Consensus 19 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g-~id~lv~ 90 (247)
T 2jah_A 19 IGEATARALAA------EGAAVAIAARRVEKLRALGDELTAAGAKVH-VLELDVADRQGVDAAVASTVEALG-GLDILVN 90 (247)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCSEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 8999999999743210 0 134678 8999999999988877632 1 2799999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +.+..+++|+.|+.++++++...++.. + .+||++||...+..
T Consensus 91 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~-------------------- 148 (247)
T 2jah_A 91 NAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-K-GTVVQMSSIAGRVN-------------------- 148 (247)
T ss_dssp CCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCGGGTCC--------------------
T ss_pred CCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-C-CEEEEEccHHhcCC--------------------
Confidence 9985321 234578999999999999987643211 3 69999998754321
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
.| +...|+.+|...+ ...|+.+.+++|+.|..+.
T Consensus 149 ----~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 192 (247)
T 2jah_A 149 ----VR-NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL 192 (247)
T ss_dssp ----CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred ----CC-CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence 01 1345887775332 3568999999999998763
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.9e-10 Score=102.63 Aligned_cols=196 Identities=11% Similarity=0.018 Sum_probs=130.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC---
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
||.+++++|.+ +|++|++.+|+..... ....++. .+.+|++|+++++++++.... +|.+++.|++..+
T Consensus 23 IG~aia~~la~------~Ga~Vv~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~g~-iDiLVNNAGi~~~~~~ 94 (242)
T 4b79_A 23 IGAAIAMQFAE------LGAEVVALGLDADGVHAPRHPRIR-REELDITDSQRLQRLFEALPR-LDVLVNNAGISRDREE 94 (242)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSTTSTTSCCCTTEE-EEECCTTCHHHHHHHHHHCSC-CSEEEECCCCCCGGGG
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHhhhhcCCeE-EEEecCCCHHHHHHHHHhcCC-CCEEEECCCCCCCccc
Confidence 79999999999 9999999999865431 2346788 999999999999999988764 9999999986432
Q ss_pred ----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcH
Q 037566 78 ----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYY 153 (360)
Q Consensus 78 ----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y 153 (360)
+++..+++|+.|+..+.+++...++.. + -++|.+||...+. | .| ....|
T Consensus 95 ~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~-G~IVnisS~~~~~---------~---------------~~-~~~~Y 147 (242)
T 4b79_A 95 YDLATFERVLRLNLSAAMLASQLARPLLAQR-G-GSILNIASMYSTF---------G---------------SA-DRPAY 147 (242)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-C-EEEEEECCGGGTS---------C---------------CS-SCHHH
T ss_pred CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-C-CeEEEEeeccccC---------C---------------CC-CCHHH
Confidence 345678999999999999987655422 2 5899998864321 0 01 13348
Q ss_pred HHHHHH--------H-h-cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCH
Q 037566 154 AVEDIA--------A-S-YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDS 223 (360)
Q Consensus 154 ~~ek~l--------~-e-~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v 223 (360)
+.+|.. + | ..+|+.+-.+-|+.|--|-......... ....+. ...|+-- +...
T Consensus 148 ~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~---~~~~~~--~~~PlgR------------~g~p 210 (242)
T 4b79_A 148 SASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVE---ATRRIM--QRTPLAR------------WGEA 210 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHH---HHHHHH--HTCTTCS------------CBCH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHH---HHHHHH--hcCCCCC------------CcCH
Confidence 776642 2 2 4578999999999886653211111110 111111 1233211 2357
Q ss_pred HHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 224 RVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 224 ~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
+|+|+++++++... -..|+++.|.+|
T Consensus 211 eeiA~~v~fLaSd~a~~iTG~~l~VDGG 238 (242)
T 4b79_A 211 PEVASAAAFLCGPGASFVTGAVLAVDGG 238 (242)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcCccCceEEECcc
Confidence 78999988887432 234888888555
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=7.8e-11 Score=108.39 Aligned_cols=196 Identities=11% Similarity=0.037 Sum_probs=129.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEe-cCCCCC-----C---CCCCCceeeEeeccCChH-----------------HHH
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTA-RRPPPS-----W---FPSSHVDHYITFDALDST-----------------DTT 55 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~-r~~~~~-----~---~~~~~v~~~v~gDl~d~~-----------------~l~ 55 (360)
||++++++|++ +|++|++++ |++... . ....++. ++.+|++|++ ++.
T Consensus 21 IG~aia~~la~------~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~ 93 (291)
T 1e7w_A 21 LGRSIAEGLHA------EGYAVCLHYHRSAAEANALSATLNARRPNSAI-TVQADLSNVATAPVSGADGSAPVTLFTRCA 93 (291)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE-EEECCCSSSCBCCCC----CCCBCHHHHHH
T ss_pred HHHHHHHHHHH------CCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeE-EEEeecCCcccccccccccccccchHHHHH
Confidence 79999999999 899999999 764211 0 0134678 8999999999 888
Q ss_pred HHHccC----CCCccEEEEeeeecCC------C--------------h---hHhhhhhHHHHHHHHHHHHhhccCCCC--
Q 037566 56 QKLSSI----SQEVTHLFWVMFQRLK------S--------------E---EINISNNSTMFKNVMSVVVDSNKGRSR-- 106 (360)
Q Consensus 56 ~~l~~~----~~~v~~V~h~A~~~~~------~--------------~---~~~~~vNv~gt~nll~a~~~~~~~~~~-- 106 (360)
++++.+ . .+|+|||+|+.... + . +..+++|+.|+.++++++...++.. +
T Consensus 94 ~~~~~~~~~~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~~ 171 (291)
T 1e7w_A 94 ELVAACYTHWG-RCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT-PAK 171 (291)
T ss_dssp HHHHHHHHHHS-CCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-CGG
T ss_pred HHHHHHHHhcC-CCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCC
Confidence 777633 1 27999999985321 1 2 3467999999999999987654312 2
Q ss_pred ----ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEc
Q 037566 107 ----LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHR 172 (360)
Q Consensus 107 ----v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilR 172 (360)
..+||++||...+.. .+ ....|+.+|...+ ...++.+..++
T Consensus 172 ~~~~~g~Iv~isS~~~~~~------------------------~~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~ 226 (291)
T 1e7w_A 172 HRGTNYSIINMVDAMTNQP------------------------LL-GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVG 226 (291)
T ss_dssp GSCSCEEEEEECCTTTTSC------------------------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCCCCcEEEEEechhhcCC------------------------CC-CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEe
Confidence 478999998765421 01 1345888776443 34689999999
Q ss_pred CCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 173 SSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 173 p~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
|+.|..+. . ... .....+. ...|+ +. -+...+|+|+++++++..+ ...|+.+++.+|.
T Consensus 227 PG~v~T~~-~--~~~----~~~~~~~--~~~p~---~~--------r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 286 (291)
T 1e7w_A 227 PGLSVLVD-D--MPP----AVWEGHR--SKVPL---YQ--------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 286 (291)
T ss_dssp ESSBCCGG-G--SCH----HHHHHHH--TTCTT---TT--------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred eCCccCCc-c--CCH----HHHHHHH--hhCCC---CC--------CCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence 99886653 1 110 0111111 11221 10 1346889999999887532 2358899887775
Q ss_pred c
Q 037566 251 V 251 (360)
Q Consensus 251 ~ 251 (360)
.
T Consensus 287 ~ 287 (291)
T 1e7w_A 287 S 287 (291)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.7e-11 Score=110.44 Aligned_cols=197 Identities=12% Similarity=0.063 Sum_probs=124.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccCCC---CccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSISQ---EVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~---~v~~V~h~ 71 (360)
.||++++++|++ +|++|++++|++... .....++. ++.+|++|++++.++++.+.. ++|+|+|+
T Consensus 32 gIG~aia~~La~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 104 (272)
T 2nwq_A 32 GFGEACARRFAE------AGWSLVLTGRREERLQALAGELSAKTRVL-PLTLDVRDRAAMSAAVDNLPEEFATLRGLINN 104 (272)
T ss_dssp SSHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHTTTSCEE-EEECCTTCHHHHHHHHHTCCGGGSSCCEEEEC
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 389999999999 899999999975321 00113678 899999999999998876521 27999999
Q ss_pred eeecC--C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCcc-EEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 72 MFQRL--K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLR-HVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 72 A~~~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~-r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+... . +.+..+++|+.|+.++++++...++.. +.. +||++||...+..
T Consensus 105 AG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~~IV~isS~~~~~~------------------- 164 (272)
T 2nwq_A 105 AGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-GAGASIVNLGSVAGKWP------------------- 164 (272)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGTSC-------------------
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCCchhccC-------------------
Confidence 98532 1 234578999999999888876533211 345 9999998754421
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+ +...|+.+|...+ ...|+.+.+++|+.|.++......... .. .. .. .+..
T Consensus 165 -----~~-~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~--~~---~~-----~~-~~~~- 226 (272)
T 2nwq_A 165 -----YP-GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGD--QA---RY-----DK-TYAG- 226 (272)
T ss_dssp -----CT-TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-------------------------------C-
T ss_pred -----CC-CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccc--hH---HH-----HH-hhcc-
Confidence 01 1345888876544 246899999999999876321100000 00 00 00 0000
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC-CCCCceeccCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR-AKNQAFNCTNG 249 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~-~~g~~yni~~g 249 (360)
......+|+|+++++++..+. ..|+.+.|..+
T Consensus 227 -------~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 227 -------AHPIQPEDIAETIFWIMNQPAHLNINSLEIMPV 259 (272)
T ss_dssp -------CCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred -------CCCCCHHHHHHHHHHHhCCCccCccceEEEeec
Confidence 113578999999998886543 23566666544
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.24 E-value=6.4e-12 Score=112.61 Aligned_cols=186 Identities=15% Similarity=0.118 Sum_probs=111.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--CCCCCCceeeEeeccCChHH---HHHHHccCCCCccEEEEeeeecC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTD---TTQKLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~---l~~~l~~~~~~v~~V~h~A~~~~ 76 (360)
||++++++|++ |+.|++++|++... .....++. ++.+|++|.++ +.+.++.... +|+|+|+|+...
T Consensus 17 IG~~~a~~l~~-------g~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~-id~lv~~Ag~~~ 87 (245)
T 3e9n_A 17 MGIEIVKDLSR-------DHIVYALGRNPEHLAALAEIEGVE-PIESDIVKEVLEEGGVDKLKNLDH-VDTLVHAAAVAR 87 (245)
T ss_dssp HHHHHHHHHTT-------TSEEEEEESCHHHHHHHHTSTTEE-EEECCHHHHHHTSSSCGGGTTCSC-CSEEEECC----
T ss_pred HHHHHHHHHhC-------CCeEEEEeCCHHHHHHHHhhcCCc-ceecccchHHHHHHHHHHHHhcCC-CCEEEECCCcCC
Confidence 79999999874 78999999875321 00124688 99999998754 2233344332 899999998532
Q ss_pred C---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 77 K---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 77 ~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
. +.+..+++|+.|+.++++++...++.. + .+||++||...|... +
T Consensus 88 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~-g~iv~isS~~~~~~~------------------------~ 141 (245)
T 3e9n_A 88 DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA-S-GCVIYINSGAGNGPH------------------------P 141 (245)
T ss_dssp ------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEEC---------------------------------
T ss_pred CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C-CeEEEEcCcccccCC------------------------C
Confidence 1 234578999999999998886542211 2 589999987655420 1
Q ss_pred CCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 148 FPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
+...|+.+|...+ ...|+.+.+++|+.|.++....... ..+... ..
T Consensus 142 -~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------------~~~~~~----------~~ 197 (245)
T 3e9n_A 142 -GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMD-------------SQGTNF----------RP 197 (245)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------------CC
T ss_pred -CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhh-------------hhhccc----------cc
Confidence 1345888876544 3468999999999998863221100 000000 11
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCceecc
Q 037566 218 CDMSDSRVLAEQQIWAATTDRAKNQAFNCT 247 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~~~g~~yni~ 247 (360)
..+++.+|+|+++++++..+ ..+++||+.
T Consensus 198 ~~~~~p~dvA~~i~~l~~~~-~~~~~~~i~ 226 (245)
T 3e9n_A 198 EIYIEPKEIANAIRFVIDAG-ETTQITNVD 226 (245)
T ss_dssp GGGSCHHHHHHHHHHHHTSC-TTEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHcCC-CccceeeeE
Confidence 24578999999999988654 457888874
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2e-11 Score=111.78 Aligned_cols=201 Identities=10% Similarity=0.003 Sum_probs=127.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|++++.++++.+ . ++|+++|+|+
T Consensus 17 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~lvnnAg 88 (281)
T 3zv4_A 17 LGRALVDRFVA------EGARVAVLDKSAERLRELEVAHGGNAV-GVVGDVRSLQDQKRAAERCLAAFG-KIDTLIPNAG 88 (281)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHTBTTEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEECCCC
T ss_pred HHHHHHHHHHH------CcCEEEEEeCCHHHHHHHHHHcCCcEE-EEEcCCCCHHHHHHHHHHHHHhcC-CCCEEEECCC
Confidence 79999999999 999999999875321 00135678 9999999999887777643 2 2799999998
Q ss_pred ecCC--------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 74 QRLK--------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 74 ~~~~--------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
.... +.+..+++|+.|+.++++++...++.. + .++|++||...+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~~----------------- 149 (281)
T 3zv4_A 89 IWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-R-GSVVFTISNAGFYPN----------------- 149 (281)
T ss_dssp CCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCGGGTSSS-----------------
T ss_pred cCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-C-CeEEEEecchhccCC-----------------
Confidence 5321 124467899999999999987653211 1 489999887544210
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCc-chhHH-HH---HHHHHHHhhcCCCe
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSL-NNSLL-TL---AVYATICRHQGLPF 205 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~-~~~~~-~~---~~~~~~~~~~~~~~ 205 (360)
+ ....|+.+|...+ ....+.+..+.|+.|..+-.... ..... .. .....+. ...|+
T Consensus 150 -------~-~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~ 219 (281)
T 3zv4_A 150 -------G-GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLK--SVLPI 219 (281)
T ss_dssp -------S-SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHH--HTCTT
T ss_pred -------C-CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHH--hcCCC
Confidence 0 1345888776544 23349999999999987632110 00000 00 0000111 11121
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCCC---CCCCceeccCCCc
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR---AKNQAFNCTNGDV 251 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~---~~g~~yni~~g~~ 251 (360)
..+...+|+|+++++++..+. ..|++++|.+|-.
T Consensus 220 ------------~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 220 ------------GRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG 256 (281)
T ss_dssp ------------SSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred ------------CCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence 234567778888888876333 4599999977754
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.8e-10 Score=104.93 Aligned_cols=184 Identities=11% Similarity=0.018 Sum_probs=120.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-C-------------CCCCceeeEeeccCChHHHHHHHccC----CC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-F-------------PSSHVDHYITFDALDSTDTTQKLSSI----SQ 63 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~-------------~~~~v~~~v~gDl~d~~~l~~~l~~~----~~ 63 (360)
||++++++|++ +|++|++++|+..... . ...++. ++.+|++|++++.++++.+ .
T Consensus 18 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g- 89 (274)
T 3e03_A 18 IGLAIALRAAR------DGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGL-ALKCDIREEDQVRAAVAATVDTFG- 89 (274)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEE-EEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHH------CCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEE-EEeCCCCCHHHHHHHHHHHHHHcC-
Confidence 79999999999 8999999999864310 0 024677 8999999999988877643 2
Q ss_pred CccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCC
Q 037566 64 EVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIG 134 (360)
Q Consensus 64 ~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~ 134 (360)
++|+++|+|+.... +.+..+++|+.|+.++++++...++.. +-.+||++||...+...
T Consensus 90 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~------------ 156 (274)
T 3e03_A 90 GIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-PNPHILTLAPPPSLNPA------------ 156 (274)
T ss_dssp CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-SSCEEEECCCCCCCCHH------------
T ss_pred CCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-CCceEEEECChHhcCCC------------
Confidence 27999999985321 234578999999999999987654322 35689999987654320
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCC
Q 037566 135 HDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLP 204 (360)
Q Consensus 135 ~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (360)
. .+ +...|+.+|...+ ...|+.+..+.|+.+.. ..... .+ .+.+
T Consensus 157 -~---------~~-~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~---T~~~~---------~~---~~~~ 210 (274)
T 3e03_A 157 -W---------WG-AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIA---TDAIN---------ML---PGVD 210 (274)
T ss_dssp -H---------HH-HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBC---C-------------------CCC
T ss_pred -C---------CC-CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccc---cchhh---------hc---cccc
Confidence 0 00 1335888776433 35689999999974332 11100 00 1111
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcCCCC--CCCce
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRA--KNQAF 244 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~--~g~~y 244 (360)
...+...+|+|+++++++..+.. .|+.+
T Consensus 211 ------------~~~~~~pedvA~~v~~l~s~~~~~itG~~i 240 (274)
T 3e03_A 211 ------------AAACRRPEIMADAAHAVLTREAAGFHGQFL 240 (274)
T ss_dssp ------------GGGSBCTHHHHHHHHHHHTSCCTTCCSCEE
T ss_pred ------------ccccCCHHHHHHHHHHHhCccccccCCeEE
Confidence 11245688999999988754322 36655
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.3e-11 Score=110.12 Aligned_cols=173 Identities=12% Similarity=-0.035 Sum_probs=116.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|+++++++++.+ . .+|.|+|+|+
T Consensus 15 IG~a~a~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~id~lvnnAg 86 (235)
T 3l6e_A 15 LGRALTIGLVE------RGHQVSMMGRRYQRLQQQELLLGNAVI-GIVADLAHHEDVDVAFAAAVEWGG-LPELVLHCAG 86 (235)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHGGGEE-EEECCTTSHHHHHHHHHHHHHHHC-SCSEEEEECC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhcCCce-EEECCCCCHHHHHHHHHHHHHhcC-CCcEEEECCC
Confidence 79999999999 9999999999753210 0022578 9999999999988877643 2 2799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++++++...++... .+||++||...+...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~---------------------- 142 (235)
T 3l6e_A 87 TGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQVGK---------------------- 142 (235)
T ss_dssp CC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCSSC----------------------
T ss_pred CCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcCCC----------------------
Confidence 5321 2345789999999999999976543222 289999886543210
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+ ....|+.+|...+ ...|+.+..++|+.|-.+.... . ...+
T Consensus 143 --~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----~------------~~~~---------- 193 (235)
T 3l6e_A 143 --A-NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN----T------------DHVD---------- 193 (235)
T ss_dssp --S-SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------------------
T ss_pred --C-CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc----c------------CCCC----------
Confidence 1 1345888776544 3568999999998875432100 0 0000
Q ss_pred cccccccCHHHHHHHHHHHHcCC
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~ 237 (360)
...+.+.+|+|+++++++..+
T Consensus 194 --~~~~~~pedvA~~v~~l~~~~ 214 (235)
T 3l6e_A 194 --PSGFMTPEDAAAYMLDALEAR 214 (235)
T ss_dssp -----CBCHHHHHHHHHHHTCCC
T ss_pred --CcCCCCHHHHHHHHHHHHhCC
Confidence 013457889999999887644
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.4e-11 Score=111.31 Aligned_cols=185 Identities=13% Similarity=0.016 Sum_probs=119.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C---CCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F---PSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~---~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|+..... . ....+. ++.+|++|++++.++++.+ . .+|+|+
T Consensus 45 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv 116 (281)
T 4dry_A 45 VGRGIAQALSA------EGYSVVITGRRPDVLDAAAGEIGGRTGNIVR-AVVCDVGDPDQVAALFAAVRAEFA-RLDLLV 116 (281)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHHSSCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 8999999999753210 0 012247 8999999999988877644 2 279999
Q ss_pred EeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCC-CccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 70 WVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRS-RLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 70 h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~-~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+|+.... +.+..+++|+.|+.++++++...++... +-.+||++||...+..
T Consensus 117 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~----------------- 179 (281)
T 4dry_A 117 NNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP----------------- 179 (281)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-----------------
T ss_pred ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-----------------
Confidence 99985321 2345789999999999998876543111 2468999998754321
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
.+ +...|+.+|...+ ...++.+..++|+.|..+-.... ....... .
T Consensus 180 -------~~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-------------~~~~~~~---~ 235 (281)
T 4dry_A 180 -------RP-NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARM-------------STGVLQA---N 235 (281)
T ss_dssp -------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC--------------------CEEECT---T
T ss_pred -------CC-CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhh-------------cchhhhh---h
Confidence 01 2445888775443 34689999999988866421110 0000000 0
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCCCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTDRA 239 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~ 239 (360)
+. .....+...+|+|+++++++..+..
T Consensus 236 ~~----~~~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 236 GE----VAAEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp SC----EEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred hc----ccccCCCCHHHHHHHHHHHhCCCcc
Confidence 00 0112356789999999999876543
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.20 E-value=2e-11 Score=110.55 Aligned_cols=144 Identities=12% Similarity=-0.009 Sum_probs=102.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||++++++|++ +|++|++++|++... . ....++. ++.+|++|++++.++++.+ .. +|+|+|
T Consensus 19 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~-id~lv~ 90 (262)
T 1zem_A 19 IGLATALRLAE------EGTAIALLDMNREALEKAEASVREKGVEAR-SYVCDVTSEEAVIGTVDSVVRDFGK-IDFLFN 90 (262)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHTTTSCEE-EEECCTTCHHHHHHHHHHHHHHHSC-CCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHHhCC-CCEEEE
Confidence 79999999999 899999999974321 0 0134678 8999999999888777633 12 799999
Q ss_pred eeeec-CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQR-LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~-~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+.. .. +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 91 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------------ 151 (262)
T 1zem_A 91 NAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMAGVKGP------------------ 151 (262)
T ss_dssp CCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHSCC------------------
T ss_pred CCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhccCC------------------
Confidence 99854 11 234578999999999999987643211 35799999987654210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
+ ....|+.+|...+ ...|+.+.+++|+.|..+
T Consensus 152 ------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 152 ------P-NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp ------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred ------C-CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 1 1345887774332 346899999999988653
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.2e-10 Score=103.07 Aligned_cols=175 Identities=13% Similarity=0.052 Sum_probs=117.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|.+++.++++.+ . ++|+
T Consensus 19 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~ 90 (250)
T 3nyw_A 19 IGAVIAAGLAT------DGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPI-VLPLDITDCTKADTEIKDIHQKYG-AVDI 90 (250)
T ss_dssp HHHHHHHHHHH------HTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCE-EEECCTTCHHHHHHHHHHHHHHHC-CEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHHhccccCcce-EEeccCCCHHHHHHHHHHHHHhcC-CCCE
Confidence 79999999999 899999999975321 00115678 9999999999888877643 2 2899
Q ss_pred EEEeeeecCC--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 68 LFWVMFQRLK--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 68 V~h~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|+|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+..
T Consensus 91 lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~------------------ 151 (250)
T 3nyw_A 91 LVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIFNVASRAAKYG------------------ 151 (250)
T ss_dssp EEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC------------------------
T ss_pred EEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEEccHHhcCC------------------
Confidence 9999985321 234678999999999999986532211 3568999988654321
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
+.+...|+.+|...+ ...|+.+..++|+.|..+. . +......
T Consensus 152 -------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~-------~----------~~~~~~~---- 203 (250)
T 3nyw_A 152 -------FADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM-------A----------KKAGTPF---- 203 (250)
T ss_dssp --------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH-------H----------HHTTCCS----
T ss_pred -------CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch-------h----------hhcCCCc----
Confidence 012345888776433 3468999999998885431 0 0111111
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~ 237 (360)
....+.+.+|+|+++++++..+
T Consensus 204 ------~~~~~~~p~dva~~v~~l~s~~ 225 (250)
T 3nyw_A 204 ------KDEEMIQPDDLLNTIRCLLNLS 225 (250)
T ss_dssp ------CGGGSBCHHHHHHHHHHHHTSC
T ss_pred ------ccccCCCHHHHHHHHHHHHcCC
Confidence 1123578999999999988654
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.16 E-value=1.1e-10 Score=109.27 Aligned_cols=146 Identities=17% Similarity=0.119 Sum_probs=104.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-C------------CCCCceeeEeeccCChHHHHHHHccCCC-CccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-F------------PSSHVDHYITFDALDSTDTTQKLSSISQ-EVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~------------~~~~v~~~v~gDl~d~~~l~~~l~~~~~-~v~~ 67 (360)
||++|+++|++ +|++|+.++|...... . ...++. ++.+|++|.+++.++++.+.. .+|+
T Consensus 14 IG~ala~~L~~------~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~g~iD~ 86 (327)
T 1jtv_A 14 IGLHLAVRLAS------DPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE-TLQLDVRDSKSVAAARERVTEGRVDV 86 (327)
T ss_dssp HHHHHHHHHHT------CTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEE-EEECCTTCHHHHHHHHHTCTTSCCSE
T ss_pred HHHHHHHHHHH------CCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceE-EEEecCCCHHHHHHHHHHHhcCCCCE
Confidence 79999999999 8999888877532210 0 124688 899999999999998886421 3899
Q ss_pred EEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 68 LFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 68 V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|||+|+.... +.+..+++|+.|+.++++++...++. .+..+||++||...+.. .
T Consensus 87 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-~~~g~IV~isS~~~~~~---------------~- 149 (327)
T 1jtv_A 87 LVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKR-RGSGRVLVTGSVGGLMG---------------L- 149 (327)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEEGGGTSC---------------C-
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCEEEEECCcccccC---------------C-
Confidence 9999985321 23457899999999999997543210 14679999998754421 0
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
+ ....|+.+|...+ ...|+.+++++|+.|..+-
T Consensus 150 --------~-~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 150 --------P-FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp --------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred --------C-CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 1 1345888886554 2468999999999997753
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=4.6e-11 Score=117.79 Aligned_cols=191 Identities=13% Similarity=0.048 Sum_probs=125.5
Q ss_pred chHHHHHHHhcCCCCCCCCcE-EEEEecCCCCCC--------C--CCCCceeeEeeccCChHHHHHHHccCCC--CccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWK-VYGTARRPPPSW--------F--PSSHVDHYITFDALDSTDTTQKLSSISQ--EVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~-V~~l~r~~~~~~--------~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~--~v~~V 68 (360)
||.+++++|++ +|++ |++++|+..... + ...+++ ++.+|++|++++.++++++.. ++|.|
T Consensus 238 IG~~la~~La~------~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~-~~~~Dv~d~~~v~~~~~~i~~~g~ld~V 310 (486)
T 2fr1_A 238 VGGQIARWLAR------RGAPHLLLVSRSGPDADGAGELVAELEALGARTT-VAACDVTDRESVRELLGGIGDDVPLSAV 310 (486)
T ss_dssp HHHHHHHHHHH------HTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHTSCTTSCEEEE
T ss_pred HHHHHHHHHHH------cCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEE-EEEeCCCCHHHHHHHHHHHHhcCCCcEE
Confidence 79999999999 8985 999999754210 0 134678 999999999999999987621 37999
Q ss_pred EEeeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc-ccccccCCcccCCcCCCCCC
Q 037566 69 FWVMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH-YMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 69 ~h~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~~~~~p 138 (360)
||+|+.... + .+..+++|+.|+.+|++++... ++++||++||.+. +|.+
T Consensus 311 Ih~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-----~~~~~V~~SS~a~~~g~~---------------- 369 (486)
T 2fr1_A 311 FHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-----DLTAFVLFSSFASAFGAP---------------- 369 (486)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTCCT----------------
T ss_pred EECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-----CCCEEEEEcChHhcCCCC----------------
Confidence 999985322 2 3356788999999999999775 6889999998643 3311
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
....|+.+|...+ +..|+++++++|+.+++++..... . . . .+. ..+
T Consensus 370 ----------g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~-------~---~-~----~~~--~~g- 421 (486)
T 2fr1_A 370 ----------GLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP-------V---A-D----RFR--RHG- 421 (486)
T ss_dssp ----------TCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---------------------------CT--TTT-
T ss_pred ----------CCHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchh-------H---H-H----HHH--hcC-
Confidence 0223777665443 456899999999999876532100 0 0 0 000 011
Q ss_pred cccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHH
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWK 259 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~ 259 (360)
...++.+++++++..++..+. .. +.+.+ +.|..+..
T Consensus 422 -----~~~i~~e~~a~~l~~~l~~~~--~~-~~v~~---~d~~~~~~ 457 (486)
T 2fr1_A 422 -----VIEMPPETACRALQNALDRAE--VC-PIVID---VRWDRFLL 457 (486)
T ss_dssp -----EECBCHHHHHHHHHHHHHTTC--SS-CEECE---ECHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHHHhCCC--Ce-EEEEe---CCHHHHhh
Confidence 245778999999988876432 22 33433 55665543
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.15 E-value=6.9e-11 Score=115.47 Aligned_cols=197 Identities=12% Similarity=0.010 Sum_probs=127.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||.+++++|++ +|++|++++|+.... .....+++ ++.+|++|+++++++++.+ ..++|.|||+|+
T Consensus 225 IG~aiA~~La~------~Ga~Vvl~~r~~~~~~l~~~~~~~~~~-~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAG 297 (454)
T 3u0b_A 225 IGATIAEVFAR------DGATVVAIDVDGAAEDLKRVADKVGGT-ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAG 297 (454)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECGGGHHHHHHHHHHHTCE-EEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCccHHHHHHHHHHcCCe-EEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCc
Confidence 79999999999 899999999864321 00123567 8999999999988877643 102799999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
+... +.+..+++|+.|+.++.+++...++.. +..+||++||.+.+...
T Consensus 298 v~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-~~g~iV~iSS~a~~~g~---------------------- 354 (454)
T 3u0b_A 298 ITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-EGGRVIGLSSMAGIAGN---------------------- 354 (454)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-TTCEEEEECCHHHHHCC----------------------
T ss_pred ccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEEeChHhCCCC----------------------
Confidence 5322 234578999999999999998653211 45799999987644210
Q ss_pred CCCCCCCcHHHHHHHH----h------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAA----S------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~----e------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+ ....|+.+|... + ...|+++.++.|+.|..+..... .. ...... + ...+
T Consensus 355 --~-g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~----~~~~~~-~-~~~~---------- 414 (454)
T 3u0b_A 355 --R-GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI-PL----ATREVG-R-RLNS---------- 414 (454)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC---------------CHHH-H-HSBT----------
T ss_pred --C-CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc-ch----hhHHHH-H-hhcc----------
Confidence 1 134588877622 2 45789999999999976532111 00 000000 0 0011
Q ss_pred cccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
...+...+|+|+++++++... ...|++++|.+|.
T Consensus 415 --l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 415 --LFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQA 450 (454)
T ss_dssp --TSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred --ccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence 112345788999998887532 2358999997664
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=7.6e-11 Score=106.54 Aligned_cols=144 Identities=10% Similarity=-0.029 Sum_probs=102.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeeccCChHHHHHHHccC-----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F--PSSHVDHYITFDALDSTDTTQKLSSI-----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~--~~~~v~~~v~gDl~d~~~l~~~l~~~-----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|++.... . ...++. ++.+|++|++++.++++.+ . ++|+|+
T Consensus 17 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~~g-~id~lv 88 (260)
T 2qq5_A 17 IGRGIALQLCK------AGATVYITGRHLDTLRVVAQEAQSLGGQCV-PVVCDSSQESEVRSLFEQVDREQQG-RLDVLV 88 (260)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHSSEEE-EEECCTTSHHHHHHHHHHHHHHHTT-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHHcCCceE-EEECCCCCHHHHHHHHHHHHHhcCC-CceEEE
Confidence 79999999999 8999999998753210 0 024678 8999999999888877643 2 279999
Q ss_pred Eeee--ec-------C-------CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcC
Q 037566 70 WVMF--QR-------L-------KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 70 h~A~--~~-------~-------~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
|+|+ .. . .+....+++|+.|+.++.+++...++.. +..+||++||...+..
T Consensus 89 nnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~------------ 155 (260)
T 2qq5_A 89 NNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-GQGLIVVISSPGSLQY------------ 155 (260)
T ss_dssp ECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-TCCEEEEECCGGGTSC------------
T ss_pred ECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-CCcEEEEEcChhhcCC------------
Confidence 9994 21 1 1234678899999988888876533211 4579999998754321
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS 180 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~ 180 (360)
.+...|+.+|...+ ...|+.+.+++|+.|..+.
T Consensus 156 --------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 156 --------------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp --------------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred --------------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 02345888776544 3468999999999997763
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=3e-10 Score=104.81 Aligned_cols=110 Identities=14% Similarity=0.033 Sum_probs=81.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCCh-HHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDS-TDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~-~~l~~~l~~~----~~~v~~V 68 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|++|+ ++++++++.+ . ++|+|
T Consensus 24 IG~~~a~~L~~------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~~v~~~~~~~~~~~g-~iD~l 95 (311)
T 3o26_A 24 IGFEICKQLSS------NGIMVVLTCRDVTKGHEAVEKLKNSNHENVV-FHQLDVTDPIATMSSLADFIKTHFG-KLDIL 95 (311)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHTTTCCSEE-EEECCTTSCHHHHHHHHHHHHHHHS-SCCEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHHhcCCCceE-EEEccCCCcHHHHHHHHHHHHHhCC-CCCEE
Confidence 89999999999 899999999975321 01124688 999999998 7776665522 1 27999
Q ss_pred EEeeeecCC---------------------------------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccE
Q 037566 69 FWVMFQRLK---------------------------------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRH 109 (360)
Q Consensus 69 ~h~A~~~~~---------------------------------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r 109 (360)
||+|+.... ..+..+++|+.|+.++++++...++.. +..|
T Consensus 96 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~~~ 174 (311)
T 3o26_A 96 VNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLS-DSPR 174 (311)
T ss_dssp EECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCE
T ss_pred EECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccC-CCCe
Confidence 999986321 123458999999999999987643312 4579
Q ss_pred EEEeccCcccc
Q 037566 110 VTLLMGTKHYM 120 (360)
Q Consensus 110 ~v~~SS~~vYg 120 (360)
||++||...+.
T Consensus 175 IV~isS~~~~~ 185 (311)
T 3o26_A 175 IVNVSSSTGSL 185 (311)
T ss_dssp EEEECCGGGSG
T ss_pred EEEEecCCccc
Confidence 99999977653
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=6.2e-10 Score=104.94 Aligned_cols=185 Identities=9% Similarity=0.028 Sum_probs=122.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--------------CCCCCceeeEeeccCChHHHHHHHccC----CC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--------------FPSSHVDHYITFDALDSTDTTQKLSSI----SQ 63 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--------------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~ 63 (360)
||++++++|++ +|++|++++|+..... ....++. ++.+|++|++++.++++.+ .
T Consensus 57 IG~aia~~La~------~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g- 128 (346)
T 3kvo_A 57 IGKAIALKAAK------DGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKAL-PCIVDVRDEQQISAAVEKAIKKFG- 128 (346)
T ss_dssp HHHHHHHHHHT------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHH------CCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHHHHcC-
Confidence 79999999999 8999999999865310 0124677 8999999999988887643 2
Q ss_pred CccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCC
Q 037566 64 EVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIG 134 (360)
Q Consensus 64 ~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~ 134 (360)
++|+|+|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 129 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~~~~~~~------------ 195 (346)
T 3kvo_A 129 GIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS-KVAHILNISPPLNLNPV------------ 195 (346)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-SSCEEEEECCCCCCCGG------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCCEEEEECCHHHcCCC------------
Confidence 27999999985321 234578999999999999997654322 45799999987654310
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCe
Q 037566 135 HDPPFKEDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 135 ~~~p~~E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (360)
+ .+ +...|+.+|...+ ...++.+..+.|+.+... . .. ..+ .+ ..
T Consensus 196 ---~-------~~-~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T---~---~~------~~~---~~-~~ 248 (346)
T 3kvo_A 196 ---W-------FK-QHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT---A---AM------DML---GG-PG 248 (346)
T ss_dssp ---G-------TS-SSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC---H---HH------HHH---CC---
T ss_pred ---C-------CC-CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc---H---HH------Hhh---cc-cc
Confidence 0 01 2445888776433 126899999999753321 1 10 011 11 11
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcCCC-CCCCce
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR-AKNQAF 244 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~-~~g~~y 244 (360)
+ ..-+...+|+|+++++++.... ..|+.+
T Consensus 249 ~----------~~r~~~pedvA~~v~~L~s~~~~itG~~i 278 (346)
T 3kvo_A 249 I----------ESQCRKVDIIADAAYSIFQKPKSFTGNFV 278 (346)
T ss_dssp C----------GGGCBCTHHHHHHHHHHHTSCTTCCSCEE
T ss_pred c----------cccCCCHHHHHHHHHHHHhcCCCCCceEE
Confidence 1 1124568899999999886522 246655
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.13 E-value=1.3e-10 Score=105.54 Aligned_cols=201 Identities=7% Similarity=-0.011 Sum_probs=126.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccC----C--CCccEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSI----S--QEVTHLF 69 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~--~~v~~V~ 69 (360)
.||++++++|++ +|++|++++|+.... .....++. ++.+|++|+++++++++.+ . .++|+|+
T Consensus 20 gIG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv 92 (269)
T 2h7i_A 20 SIAFHIARVAQE------QGAQLVLTGFDRLRLIQRITDRLPAKAP-LLELDVQNEEHLASLAGRVTEAIGAGNKLDGVV 92 (269)
T ss_dssp SHHHHHHHHHHH------TTCEEEEEECSCHHHHHHHHTTSSSCCC-EEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred chHHHHHHHHHH------CCCEEEEEecChHHHHHHHHHhcCCCce-EEEccCCCHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 379999999999 899999999875321 01124678 8999999999988877643 1 0189999
Q ss_pred EeeeecC------C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCC
Q 037566 70 WVMFQRL------K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 70 h~A~~~~------~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
|+|+... . +.+..+++|+.|+.++++++...++ .-.+||++||...++.
T Consensus 93 ~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~iss~~~~~~-------------- 155 (269)
T 2h7i_A 93 HSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSRAM-------------- 155 (269)
T ss_dssp ECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSSCC--------------
T ss_pred ECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhc---cCCeEEEEcCcccccc--------------
Confidence 9998532 1 2234679999999999999987532 1158999987643221
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCc-----chhHH-HH-HHHHHHH
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSL-----NNSLL-TL-AVYATIC 198 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~-----~~~~~-~~-~~~~~~~ 198 (360)
+ ....|+.+|...+ ...|+.+..++|+.|..+..... ..... .. .....+.
T Consensus 156 -----------~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (269)
T 2h7i_A 156 -----------P-AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223 (269)
T ss_dssp -----------T-TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHH
T ss_pred -----------C-chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhh
Confidence 1 1335777775433 35689999999988865411000 00000 00 0000010
Q ss_pred hhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 199 RHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 199 ~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
+ ..|+ | +-+...+|+|+++++++.... ..|+++++.+|.
T Consensus 224 ~--~~p~---~--------rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 224 Q--RAPI---G--------WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp H--HCTT---C--------CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred c--cCCc---c--------cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence 0 1121 1 024457889999998885422 348888886664
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.11 E-value=9.7e-11 Score=107.35 Aligned_cols=174 Identities=13% Similarity=0.039 Sum_probs=117.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--------FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--------~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||++++++|++ +|++|++++|++.... ....+++ ++.+|++|.+++.++++.+ . ++|+|+
T Consensus 40 IG~~la~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~g-~iD~li 111 (286)
T 1xu9_A 40 IGREMAYHLAK------MGAHVVVTARSKETLQKVVSHCLELGAASAH-YIAGTMEDMTFAEQFVAQAGKLMG-GLDMLI 111 (286)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHTCSEEE-EEECCTTCHHHHHHHHHHHHHHHT-SCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHHhCCCceE-EEeCCCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 8999999999753210 0013578 9999999999888777632 1 279999
Q ss_pred Ee-eeecCC--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WV-MFQRLK--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~-A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+ |+.... +.+..+++|+.|+.++++++...++. +..+||++||...+.. .
T Consensus 112 ~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~g~iv~isS~~~~~~---------------~--- 171 (286)
T 1xu9_A 112 LNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ--SNGSIVVVSSLAGKVA---------------Y--- 171 (286)
T ss_dssp ECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEEEGGGTSC---------------C---
T ss_pred ECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHH--CCCEEEEECCcccccC---------------C---
Confidence 99 454211 23457899999999999998764211 2358999999765421 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh------------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS------------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e------------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
| +...|+.+|...+ ...++.+++++|+.|..+. . . ....
T Consensus 172 ------~-~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~-----~--~---------~~~~------ 222 (286)
T 1xu9_A 172 ------P-MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-----A--M---------KAVS------ 222 (286)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-----H--H---------HHSC------
T ss_pred ------C-CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh-----H--H---------Hhcc------
Confidence 1 2445888776543 2458999999998875431 0 0 0000
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD 237 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~ 237 (360)
+. .....++.+++|++++.++..+
T Consensus 223 ~~-----~~~~~~~~~~vA~~i~~~~~~~ 246 (286)
T 1xu9_A 223 GI-----VHMQAAPKEECALEIIKGGALR 246 (286)
T ss_dssp GG-----GGGGCBCHHHHHHHHHHHHHTT
T ss_pred cc-----ccCCCCCHHHHHHHHHHHHhcC
Confidence 10 1123567899999999887643
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=7.9e-10 Score=99.08 Aligned_cols=191 Identities=13% Similarity=0.101 Sum_probs=126.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h~A~~ 74 (360)
||.+++++|++ +|++|++.+|+.... ..+..++. ++.+|++|+++++++++. .. ++|.+++.|+.
T Consensus 14 IG~aia~~la~------~Ga~V~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~v~~~~~~~g-~iDiLVNNAG~ 85 (247)
T 3ged_A 14 IGKQICLDFLE------AGDKVCFIDIDEKRSADFAKERPNLF-YFHGDVADPLTLKKFVEYAMEKLQ-RIDVLVNNACR 85 (247)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHTTCTTEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEEEECCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHhcCCEE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCC
Confidence 79999999999 999999999975321 11235678 899999999988776643 23 28999999985
Q ss_pred cCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 75 RLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 75 ~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
... +.+..+++|+.|+.++.+++...|+... .++|.+||...+..
T Consensus 86 ~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--G~IInisS~~~~~~------------------------ 139 (247)
T 3ged_A 86 GSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK--GRIINIASTRAFQS------------------------ 139 (247)
T ss_dssp CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGTSC------------------------
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CcEEEEeecccccC------------------------
Confidence 321 3456789999999999999876654222 48999988653311
Q ss_pred CCCCCCcHHHHHHH--------H-hcCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 146 LPFPNFYYAVEDIA--------A-SYSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l--------~-e~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
.| ....|+.+|.. + |..+++.+..+-|+.|--+....... ... ...|+ |.
T Consensus 140 ~~-~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~---------~~~--~~~Pl---~R------ 198 (247)
T 3ged_A 140 EP-DSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQ---------EDC--AAIPA---GK------ 198 (247)
T ss_dssp CT-TCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCH---------HHH--HTSTT---SS------
T ss_pred CC-CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHH---------HHH--hcCCC---CC------
Confidence 01 12348776643 2 23358999999998885442211111 011 12232 11
Q ss_pred cccccCHHHHHHHHHHHHcCCCCCCCceeccCCC
Q 037566 217 FCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGD 250 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~ 250 (360)
+...+|+|+++++++...-..|+++.|.+|-
T Consensus 199 ---~g~pediA~~v~fL~s~~~iTG~~i~VDGG~ 229 (247)
T 3ged_A 199 ---VGTPKDISNMVLFLCQQDFITGETIIVDGGM 229 (247)
T ss_dssp ---CBCHHHHHHHHHHHHHCSSCCSCEEEESTTG
T ss_pred ---CcCHHHHHHHHHHHHhCCCCCCCeEEECcCH
Confidence 2357789999988886554569999886664
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.08 E-value=4.5e-10 Score=100.42 Aligned_cols=143 Identities=10% Similarity=-0.051 Sum_probs=100.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeecc--CChHHHHHHHccC----CCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDA--LDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl--~d~~~l~~~l~~~----~~~v~~ 67 (360)
||++++++|++ +|++|++++|+.... .....++. ++.+|+ +|.+++.++++.+ . ++|+
T Consensus 26 IG~~ia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~d~d~~~~~~~~~~~~~~~~~~g-~id~ 97 (247)
T 3i1j_A 26 IGAAAARAYAA------HGASVVLLGRTEASLAEVSDQIKSAGQPQPL-IIALNLENATAQQYRELAARVEHEFG-RLDG 97 (247)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTSCCCE-EEECCTTTCCHHHHHHHHHHHHHHHS-CCSE
T ss_pred HHHHHHHHHHH------CCCEEEEEecCHHHHHHHHHHHHhcCCCCce-EEEeccccCCHHHHHHHHHHHHHhCC-CCCE
Confidence 79999999999 899999999975321 00124566 778877 8888887776533 2 2799
Q ss_pred EEEeeeecCC----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 68 LFWVMFQRLK----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 68 V~h~A~~~~~----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+|+|+.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 98 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~--------------- 161 (247)
T 3i1j_A 98 LLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-EDASIAFTSSSVGRKGR--------------- 161 (247)
T ss_dssp EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSEEEEEECCGGGTSCC---------------
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCeEEEEcchhhcCCC---------------
Confidence 9999985311 234578999999999999996543312 45789999887543210
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cC-CCCcEEEEcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YS-PAVTYSVHRSSIIIG 178 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~-~~~~~~ilRp~~vyG 178 (360)
+ +...|+.+|...+ .. .++.+..++|+.|..
T Consensus 162 ---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t 203 (247)
T 3i1j_A 162 ---------A-NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRT 203 (247)
T ss_dssp ---------T-TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSS
T ss_pred ---------C-CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Confidence 1 2345888776544 23 689999999977743
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.06 E-value=5.8e-10 Score=110.44 Aligned_cols=192 Identities=13% Similarity=0.070 Sum_probs=126.6
Q ss_pred chHHHHHHHhcCCCCCCCCc-EEEEEecCCCCC----------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPW-KVYGTARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~-~V~~l~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h 70 (360)
||.+++++|++ +|+ .|+.++|+.... .....+++ ++.+|++|++++.+++++. ++|.|||
T Consensus 271 IG~~lA~~La~------~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~-~~~~Dvtd~~~v~~~~~~~--~ld~VVh 341 (511)
T 2z5l_A 271 IGRRLARRLAA------EGAERLVLTSRRGPEAPGAAELAEELRGHGCEVV-HAACDVAERDALAALVTAY--PPNAVFH 341 (511)
T ss_dssp HHHHHHHHHHH------TTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEE-EEECCSSCHHHHHHHHHHS--CCSEEEE
T ss_pred HHHHHHHHHHh------CCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEE-EEEeCCCCHHHHHHHHhcC--CCcEEEE
Confidence 79999999998 898 588888875321 00134588 8999999999999999873 2799999
Q ss_pred eeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCc-cccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTK-HYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~-vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+|+.... + .+..+++|+.|+.+|.+++... .++++||++||.+ +||.+
T Consensus 342 ~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~~~~~~V~~SS~a~~~g~~------------------ 399 (511)
T 2z5l_A 342 TAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI----KGLDAFVLFSSVTGTWGNA------------------ 399 (511)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC----TTCCCEEEEEEGGGTTCCT------------------
T ss_pred CCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeCHHhcCCCC------------------
Confidence 9985321 2 2346789999999999987642 2578999999864 33311
Q ss_pred CCCCCCCCCCCcHHHHHHHHh------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
....|+.+|...+ +..|+++++++|+.+-+.+.... .. . ..+.+ .+
T Consensus 400 --------g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~--~~--~---~~~~~-~g------------ 451 (511)
T 2z5l_A 400 --------GQGAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAG--AG--E---ESLSR-RG------------ 451 (511)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCC--HH--H---HHHHH-HT------------
T ss_pred --------CCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCccccc--cc--H---HHHHh-cC------------
Confidence 1345888887655 46799999999987743322211 10 0 01111 11
Q ss_pred cccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHH
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLL 261 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~i 261 (360)
...++.++++++++.++..+.. + +.+.+ +.|..+...+
T Consensus 452 ---~~~l~~e~~a~~l~~al~~~~~--~-v~v~~---~d~~~~~~~~ 489 (511)
T 2z5l_A 452 ---LRAMDPDAAVDALLGAMGRNDV--C-VTVVD---VDWERFAPAT 489 (511)
T ss_dssp ---BCCBCHHHHHHHHHHHHHHTCS--E-EEECC---BCHHHHHHHH
T ss_pred ---CCCCCHHHHHHHHHHHHhCCCC--E-EEEEe---CCHHHHHhhh
Confidence 1246688899999888764321 2 33443 4466555443
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.6e-10 Score=102.09 Aligned_cols=199 Identities=11% Similarity=0.030 Sum_probs=115.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEE-e--cCCCCCCCCCCCceeeEeeccCChHHHHH----HHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGT-A--RRPPPSWFPSSHVDHYITFDALDSTDTTQ----KLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l-~--r~~~~~~~~~~~v~~~v~gDl~d~~~l~~----~l~~~~~~v~~V~h~A~ 73 (360)
.||++++++|++ +|++|+++ + |++.... ...-+ +..+|+.|++++.+ +.+.... +|+|+|+|+
T Consensus 12 gIG~~ia~~l~~------~G~~V~~~~~~~r~~~~~~--~~~~~-~~~~~~~~~~~v~~~~~~~~~~~g~-iD~lv~~Ag 81 (244)
T 1zmo_A 12 FAGPAAVEALTQ------DGYTVVCHDASFADAAERQ--RFESE-NPGTIALAEQKPERLVDATLQHGEA-IDTIVSNDY 81 (244)
T ss_dssp TTHHHHHHHHHH------TTCEEEECCGGGGSHHHHH--HHHHH-STTEEECCCCCGGGHHHHHGGGSSC-EEEEEECCC
T ss_pred hHHHHHHHHHHH------CCCEEEEecCCcCCHHHHH--HHHHH-hCCCcccCHHHHHHHHHHHHHHcCC-CCEEEECCC
Confidence 489999999999 89999999 6 8643210 00000 00123334443333 3333332 899999998
Q ss_pred ecCC------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 74 QRLK------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 74 ~~~~------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
.... +.+..+++|+.|+.++++++...++.. +..+||++||...+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~------------------- 141 (244)
T 1zmo_A 82 IPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFITSSVGKKPL------------------- 141 (244)
T ss_dssp CCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCC-------------------
T ss_pred cCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECChhhCCCC-------------------
Confidence 5321 234578999999999999987543212 45799999997654310
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
| +...|+.+|...+ ...++.+.+++|+.|-.+.... ......-.....+.+ ...|+
T Consensus 142 -----~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~-~~~p~------ 207 (244)
T 1zmo_A 142 -----A-YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP-TSDWENNPELRERVD-RDVPL------ 207 (244)
T ss_dssp -----T-TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC-HHHHHHCHHHHHHHH-HHCTT------
T ss_pred -----C-CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc-cccccchHHHHHHHh-cCCCC------
Confidence 0 1334888776543 3458999999999886642100 011000000011110 01121
Q ss_pred ccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 249 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g 249 (360)
.-+...+|+|+++++++.... ..|+.+.+.+|
T Consensus 208 ------~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG 241 (244)
T 1zmo_A 208 ------GRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG 241 (244)
T ss_dssp ------CSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred ------CCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence 124568899999998876432 24888888665
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.9e-09 Score=100.43 Aligned_cols=183 Identities=9% Similarity=0.018 Sum_probs=115.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC------C--------CCCCCCceeeEeeccCChHHHHHHHcc----CCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP------S--------WFPSSHVDHYITFDALDSTDTTQKLSS----ISQ 63 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~------~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~ 63 (360)
||++++++|++ +|++|++++|.... . ...... . .+.+|+.|.+++.++++. ...
T Consensus 21 IG~~~a~~La~------~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~-~-~~~~D~~~~~~~~~~~~~~~~~~g~ 92 (319)
T 1gz6_A 21 LGRAYALAFAE------RGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-G-KAVANYDSVEAGEKLVKTALDTFGR 92 (319)
T ss_dssp HHHHHHHHHHH------TTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-C-EEEEECCCGGGHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHH------CCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC-C-eEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 79999999999 89999998764210 0 000011 2 246899999876665442 322
Q ss_pred CccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc-ccccccCCcccCCcC
Q 037566 64 EVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH-YMGPVFDPSLVGQLI 133 (360)
Q Consensus 64 ~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~ 133 (360)
+|+|||+|+.... +.+..+++|+.|+.++++++...++.. +..|||++||... ||.
T Consensus 93 -iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~grIV~vsS~~~~~~~------------ 158 (319)
T 1gz6_A 93 -IDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIYGN------------ 158 (319)
T ss_dssp -CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCC------------
T ss_pred -CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhccCC------------
Confidence 7999999985321 234578999999999999985432211 4579999998643 321
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGL 203 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~ 203 (360)
+ +...|+.+|...+ ...|+.+.+++|+.+ .+ ..... .
T Consensus 159 -------------~-~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~----~~~~~--------------~ 205 (319)
T 1gz6_A 159 -------------F-GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SR----MTETV--------------M 205 (319)
T ss_dssp -------------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-ST----TTGGG--------------S
T ss_pred -------------C-CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cc----ccccc--------------C
Confidence 0 1345888876543 346899999999876 21 11000 0
Q ss_pred CeeeeCCcccccccccccCHHHHHHHHHHHHcCCC-CCCCceeccCC
Q 037566 204 PFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR-AKNQAFNCTNG 249 (360)
Q Consensus 204 ~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~-~~g~~yni~~g 249 (360)
+ . ........+++|.++++++..+. ..|+.|++.+|
T Consensus 206 ~-----~-----~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG 242 (319)
T 1gz6_A 206 P-----E-----DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG 242 (319)
T ss_dssp C-----H-----HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred C-----h-----hhhccCCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence 0 0 01123456678888888876432 25888988666
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.5e-09 Score=106.81 Aligned_cols=142 Identities=15% Similarity=0.047 Sum_probs=105.7
Q ss_pred chHHHHHHHhcCCCCCCCCc-EEEEEecCCCCCC--------C--CCCCceeeEeeccCChHHHHHHHccCCC--CccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPW-KVYGTARRPPPSW--------F--PSSHVDHYITFDALDSTDTTQKLSSISQ--EVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~-~V~~l~r~~~~~~--------~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~--~v~~V 68 (360)
||.+++++|++ +|+ .|+.++|+..+.. + ...++. ++.+|++|++++.++++.+.. ++|.|
T Consensus 251 IG~alA~~La~------~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~-~~~~Dvtd~~~v~~~~~~i~~~g~ld~v 323 (496)
T 3mje_A 251 IGGRVARRLAE------QGAAHLVLTSRRGADAPGAAELRAELEQLGVRVT-IAACDAADREALAALLAELPEDAPLTAV 323 (496)
T ss_dssp HHHHHHHHHHH------TTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHTCCTTSCEEEE
T ss_pred hHHHHHHHHHH------CCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHHHhCCCeEE
Confidence 79999999999 898 6888888643210 0 134688 999999999999999876531 38999
Q ss_pred EEeeeec-CC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccc-cccccCCcccCCcCCCCC
Q 037566 69 FWVMFQR-LK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHY-MGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 69 ~h~A~~~-~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vY-g~~~~~~~~~g~~~~~~~ 137 (360)
||+|++. .. + .+..+++|+.|+.+|.+++... ...+||++||.+.+ |.
T Consensus 324 Vh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-----~~~~iV~~SS~a~~~g~---------------- 382 (496)
T 3mje_A 324 FHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-----DLDAFVLFSSGAAVWGS---------------- 382 (496)
T ss_dssp EECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTTC----------------
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCEEEEEeChHhcCCC----------------
Confidence 9999864 21 2 3457899999999999998875 57899999886432 21
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh------cCCCCcEEEEcCCCeeecCC
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS------YSPAVTYSVHRSSIIIGASS 181 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp~~ 181 (360)
+ ....|+.+|...+ +..|++++++.|+.+.+++.
T Consensus 383 ---------~-g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm 422 (496)
T 3mje_A 383 ---------G-GQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGM 422 (496)
T ss_dssp ---------T-TCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC
T ss_pred ---------C-CcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCcc
Confidence 1 1334888776544 45799999999998877654
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.96 E-value=9e-10 Score=99.18 Aligned_cols=198 Identities=14% Similarity=0.035 Sum_probs=124.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h 70 (360)
||.+++++|++ +|++|++.+|+.... .....++. .+.+|++|+++++++++. .. ++|.+++
T Consensus 21 IG~aia~~la~------~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G-~iDiLVN 92 (255)
T 4g81_D 21 LGFAYAEGLAA------AGARVILNDIRATLLAESVDTLTRKGYDAH-GVAFDVTDELAIEAAFSKLDAEGI-HVDILIN 92 (255)
T ss_dssp HHHHHHHHHHH------TTCEEEECCSCHHHHHHHHHHHHHTTCCEE-ECCCCTTCHHHHHHHHHHHHHTTC-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeeCCCHHHHHHHHHHHHHHCC-CCcEEEE
Confidence 79999999999 999999999975321 01235677 899999999988776653 33 3899999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
.|+.... +.+..+++|+.|+..+.+++...|+...+-.++|.+||...+..
T Consensus 93 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~-------------------- 152 (255)
T 4g81_D 93 NAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA-------------------- 152 (255)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB--------------------
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC--------------------
Confidence 9985321 34567899999999999988765421113358999988754321
Q ss_pred CCCCCCCCCCcHHHHHHH--------H-h-cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIA--------A-S-YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l--------~-e-~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
.| ....|+.+|.. + | ..+|+.+-.+-|+.|.-|........- .....+. ...|+--
T Consensus 153 ----~~-~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~---~~~~~~~--~~~Pl~R---- 218 (255)
T 4g81_D 153 ----RP-TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDK---QFDSWVK--SSTPSQR---- 218 (255)
T ss_dssp ----CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCH---HHHHHHH--HHSTTCS----
T ss_pred ----CC-CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCH---HHHHHHH--hCCCCCC----
Confidence 01 13348766632 2 2 457899999999888654211100000 0111111 1123211
Q ss_pred ccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
+...+|+|.++++++... -..|+++.|.+|
T Consensus 219 --------~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 219 --------WGRPEELIGTAIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp --------CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --------CcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence 233566888888776432 235899888555
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.4e-09 Score=98.02 Aligned_cols=147 Identities=14% Similarity=-0.010 Sum_probs=99.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CC----CCCCceeeEeeccCChHHHHHHHccCCC-----Ccc-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WF----PSSHVDHYITFDALDSTDTTQKLSSISQ-----EVT- 66 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~----~~~~v~~~v~gDl~d~~~l~~~l~~~~~-----~v~- 66 (360)
||++++++|++ ...+|++|++++|+.... .. ...++. ++.+|++|++++.++++.+.. .+|
T Consensus 18 IG~~ia~~l~~---~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~ 93 (259)
T 1oaa_A 18 FGRALAPQLAR---LLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV-LAAADLGTEAGVQRLLSAVRELPRPEGLQR 93 (259)
T ss_dssp HHHHHHHHHHT---TBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEE-EEECCTTSHHHHHHHHHHHHHSCCCTTCCE
T ss_pred HHHHHHHHHHH---hhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEE-EEecCCCCHHHHHHHHHHHHhccccccCCc
Confidence 79999999995 000499999999975321 00 034578 899999999988877654310 156
Q ss_pred -EEEEeeeecC---------CC---hhHhhhhhHHHHHHHHHHHHhhccCC-CCccEEEEeccCccccccccCCcccCCc
Q 037566 67 -HLFWVMFQRL---------KS---EEINISNNSTMFKNVMSVVVDSNKGR-SRLRHVTLLMGTKHYMGPVFDPSLVGQL 132 (360)
Q Consensus 67 -~V~h~A~~~~---------~~---~~~~~~vNv~gt~nll~a~~~~~~~~-~~v~r~v~~SS~~vYg~~~~~~~~~g~~ 132 (360)
+|+|+|+... .+ .+..+++|+.|+.++++++...++.. .+..+||++||...|...
T Consensus 94 ~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 163 (259)
T 1oaa_A 94 LLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY---------- 163 (259)
T ss_dssp EEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC----------
T ss_pred cEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC----------
Confidence 9999998531 12 23578999999999999998764321 134689999997654210
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHh--------cCCCCcEEEEcCCCee
Q 037566 133 IGHDPPFKEDSLRLPFPNFYYAVEDIAAS--------YSPAVTYSVHRSSIII 177 (360)
Q Consensus 133 ~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e--------~~~~~~~~ilRp~~vy 177 (360)
+ +...|+.+|...+ +..++.+..+.|+.|-
T Consensus 164 --------------~-~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~ 201 (259)
T 1oaa_A 164 --------------K-GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp --------------T-TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred --------------C-CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcC
Confidence 1 2345888876544 2234888888887664
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.93 E-value=3e-09 Score=95.04 Aligned_cols=197 Identities=14% Similarity=0.119 Sum_probs=125.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~ 76 (360)
||..++++|.+ +|++|++.+|+.... .....++. .+.+|++|+++++++++.-. +|.+++.|++..
T Consensus 21 IG~aiA~~la~------~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~-~~~~Dv~d~~~v~~~~~~g~--iDiLVNNAGi~~ 91 (247)
T 4hp8_A 21 LGQAIAVGLAA------AGAEVVCAARRAPDETLDIIAKDGGNAS-ALLIDFADPLAAKDSFTDAG--FDILVNNAGIIR 91 (247)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCCHHHHHHHHHTTCCEE-EEECCTTSTTTTTTSSTTTC--CCEEEECCCCCC
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCcHHHHHHHHHHhCCcEE-EEEccCCCHHHHHHHHHhCC--CCEEEECCCCCC
Confidence 79999999999 999999999975421 01235677 89999999998888776543 899999998532
Q ss_pred C---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 77 K---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 77 ~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
. +++..+++|+.|+..+.+++...|+...+-.+||.+||...+. | . |
T Consensus 92 ~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~---------g------------~---~ 147 (247)
T 4hp8_A 92 RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ---------G------------G---I 147 (247)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS---------C------------C---S
T ss_pred CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC---------C------------C---C
Confidence 1 3456789999999999998776543111235899999864321 0 0 1
Q ss_pred CCCCcHHHHHHH--------H-h-cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 148 FPNFYYAVEDIA--------A-S-YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 148 ~p~~~Y~~ek~l--------~-e-~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
....|+.+|.. + | ..+|+.+-.+-|+.|--|........ -.....+. ...|+ |.
T Consensus 148 -~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~---~~~~~~~~--~~~Pl---gR------- 211 (247)
T 4hp8_A 148 -RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRAD---AARNKAIL--ERIPA---GR------- 211 (247)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS---HHHHHHHH--TTCTT---SS-------
T ss_pred -CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccC---HHHHHHHH--hCCCC---CC-------
Confidence 12348776642 2 2 45789999999988754321100000 00111111 12332 11
Q ss_pred ccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 218 CDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
+...+|+|.++++++... -..|+++.|.+|
T Consensus 212 --~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 212 --WGHSEDIAGAAVFLSSAAADYVHGAILNVDGG 243 (247)
T ss_dssp --CBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred --CcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence 234678999988887432 134888888555
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=4.9e-09 Score=94.60 Aligned_cols=201 Identities=11% Similarity=0.092 Sum_probs=127.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC------CCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW------FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~------~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h~ 71 (360)
||..++++|++ +|..|++.+|+..... ....++. ++.+|++|+++++++++. .. ++|.+++.
T Consensus 19 IG~aia~~la~------~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~v~~~~~~~G-~iDiLVNn 90 (258)
T 4gkb_A 19 IGGAISMRLAE------ERAIPVVFARHAPDGAFLDALAQRQPRAT-YLPVELQDDAQCRDAVAQTIATFG-RLDGLVNN 90 (258)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCCCHHHHHHHHHHCTTCE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEEC
T ss_pred HHHHHHHHHHH------cCCEEEEEECCcccHHHHHHHHhcCCCEE-EEEeecCCHHHHHHHHHHHHHHhC-CCCEEEEC
Confidence 79999999999 9999999999765410 1235678 999999999887776653 23 28999999
Q ss_pred eeecCC--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 72 MFQRLK--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 72 A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
|++... +....+++|+.|+.++.+++...|+... .++|.+||...+...
T Consensus 91 AGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~~--------------------- 147 (258)
T 4gkb_A 91 AGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--GAIVNISSKTAVTGQ--------------------- 147 (258)
T ss_dssp CCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTHHHHCC---------------------
T ss_pred CCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEeehhhccCC---------------------
Confidence 985321 2445789999999999999877654222 489999987543210
Q ss_pred CCCCCCCCcHHHHHHHH---------h-cCCCCcEEEEcCCCeeecCCCCcchhH-HHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 144 LRLPFPNFYYAVEDIAA---------S-YSPAVTYSVHRSSIIIGASSRSLNNSL-LTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~---------e-~~~~~~~~ilRp~~vyGp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
| ....|+.+|..- | ..+|+.+..+.|+.|--|...+..... ..-.....+. ...|+ |.
T Consensus 148 ---~-~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~~~pl---g~-- 216 (258)
T 4gkb_A 148 ---G-NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIA--AKVPL---GR-- 216 (258)
T ss_dssp ---S-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHH--TTCTT---TT--
T ss_pred ---C-CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHH--hcCCC---CC--
Confidence 1 133487766432 2 457899999999988655322111000 0000001111 11221 21
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
-+...+|+|+++++++... -..|++++|.+|-
T Consensus 217 ------R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 217 ------RFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGY 250 (258)
T ss_dssp ------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred ------CCcCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence 1345788999988887432 2358999886664
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.9e-09 Score=104.88 Aligned_cols=143 Identities=12% Similarity=0.029 Sum_probs=100.9
Q ss_pred chHHHHHHHhcCCCCCCCCcE-EEEE-ecCCCC-----------CC-------C--CCCCceeeEeeccCChHHHHHHHc
Q 037566 2 AGLSLAEALKNNPTIPGGPWK-VYGT-ARRPPP-----------SW-------F--PSSHVDHYITFDALDSTDTTQKLS 59 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~-V~~l-~r~~~~-----------~~-------~--~~~~v~~~v~gDl~d~~~l~~~l~ 59 (360)
||.+++++|++ +|++ |+.+ +|++.+ .. + ...++. ++.+|++|++++.++++
T Consensus 263 IG~~lA~~La~------~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~-~~~~Dvtd~~~v~~~~~ 335 (525)
T 3qp9_A 263 AAAEAARRLAR------DGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATAT-VVTCDLTDAEAAARLLA 335 (525)
T ss_dssp HHHHHHHHHHH------HTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEE-EEECCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHH------cCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEE-EEECCCCCHHHHHHHHH
Confidence 79999999998 8988 5555 676422 00 0 124678 99999999999999988
Q ss_pred cCC--CCccEEEEeeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcc
Q 037566 60 SIS--QEVTHLFWVMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSL 128 (360)
Q Consensus 60 ~~~--~~v~~V~h~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~ 128 (360)
.+. .++|.|||+|++... + .+..+++|+.|+.+|.+++...++......+||++||.+.+-..
T Consensus 336 ~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~------ 409 (525)
T 3qp9_A 336 GVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG------ 409 (525)
T ss_dssp TSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC------
T ss_pred HHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC------
Confidence 752 138999999985321 2 34578999999999999998763211117899999886543210
Q ss_pred cCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh------cCCCCcEEEEcCCCe
Q 037566 129 VGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS------YSPAVTYSVHRSSII 176 (360)
Q Consensus 129 ~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~v 176 (360)
+ ....|+.+|...+ +..|++++++.|+.+
T Consensus 410 ------------------~-g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 410 ------------------A-GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW 444 (525)
T ss_dssp ------------------T-TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred ------------------C-CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 1 1345888887554 456899999999888
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.90 E-value=9.4e-09 Score=92.45 Aligned_cols=199 Identities=11% Similarity=-0.060 Sum_probs=126.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----W--FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~--~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h 70 (360)
||.+++++|.+ +|+.|++.+|+.... . ....++. ++.+|++|+++++++++. .. .+|.+++
T Consensus 19 IG~aiA~~la~------~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~-~~~~Dvt~~~~v~~~~~~~~~~~G-~iDiLVN 90 (254)
T 4fn4_A 19 IGRAIAKKFAL------NDSIVVAVELLEDRLNQIVQELRGMGKEVL-GVKADVSKKKDVEEFVRRTFETYS-RIDVLCN 90 (254)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEEEE
T ss_pred HHHHHHHHHHH------cCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEEE
Confidence 79999999999 999999999975321 0 1235677 899999999998777653 23 2899999
Q ss_pred eeeecC--C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRL--K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
.|++.. . +.+..+++|+.|+.++.+++...|+.. +-.++|.+||...+..
T Consensus 91 NAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS~~g~~~------------------- 150 (254)
T 4fn4_A 91 NAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-GKGVIVNTASIAGIRG------------------- 150 (254)
T ss_dssp CCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCS-------------------
T ss_pred CCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEechhhcCC-------------------
Confidence 998432 1 234578999999999999987765422 2358999988643210
Q ss_pred CCCCCCCCCCCcHHHHHHH--------H-h-cCCCCcEEEEcCCCeeecCCCCcc-hhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 141 EDSLRLPFPNFYYAVEDIA--------A-S-YSPAVTYSVHRSSIIIGASSRSLN-NSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l--------~-e-~~~~~~~~ilRp~~vyGp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
.| ....|+.+|.. + | ..+|+.+..+-|+.|--|-..... ..-. . ...+.+. ..|+ |
T Consensus 151 -----~~-~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~--~-~~~~~~~-~~~~---~ 217 (254)
T 4fn4_A 151 -----GF-AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSEL--G-MRTLTKL-MSLS---S 217 (254)
T ss_dssp -----SS-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHH--H-HHHHHHH-HTTC---C
T ss_pred -----CC-CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHH--H-HHHHHhc-CCCC---C
Confidence 01 12348766542 2 2 457899999999988655221111 1100 0 0011111 1111 1
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
. +...+|+|.++++++... -..|+++.|.+|-
T Consensus 218 R---------~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~ 251 (254)
T 4fn4_A 218 R---------LAEPEDIANVIVFLASDEASFVNGDAVVVDGGL 251 (254)
T ss_dssp C---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred C---------CcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCc
Confidence 1 234778999998887432 2358999886664
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.2e-08 Score=93.83 Aligned_cols=198 Identities=9% Similarity=-0.002 Sum_probs=118.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCC-----------CCC----CCCCCC----ceeeEee------------ccC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRP-----------PPS----WFPSSH----VDHYITF------------DAL 49 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~-----------~~~----~~~~~~----v~~~v~g------------Dl~ 49 (360)
.||++++++|++ +|++|++++|++ ... ...... .. .+.+ |++
T Consensus 21 GIG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dv~~Dv~ 93 (297)
T 1d7o_A 21 GYGWAVAKSLAA------AGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKK-VYPLDAVFDNPEDVPEDVK 93 (297)
T ss_dssp SHHHHHHHHHHH------TTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEE-EEEECTTCCSGGGSCHHHH
T ss_pred ChHHHHHHHHHH------CCCeEEEeeccccchhhhhhhhhhHhhhhhhhcccccccccc-ccccceeccchhhhhhhhh
Confidence 389999999999 899999987531 110 000000 12 3333 333
Q ss_pred C--------hHHHHHHHcc----CCCCccEEEEeeeecC----C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCC
Q 037566 50 D--------STDTTQKLSS----ISQEVTHLFWVMFQRL----K-------SEEINISNNSTMFKNVMSVVVDSNKGRSR 106 (360)
Q Consensus 50 d--------~~~l~~~l~~----~~~~v~~V~h~A~~~~----~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~ 106 (360)
| +++++++++. ... +|+++|+|+... . +.+..+++|+.|+.++++++...++.
T Consensus 94 ~~~~~~~~~~~~v~~~~~~~~~~~g~-iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--- 169 (297)
T 1d7o_A 94 ANKRYAGSSNWTVQEAAECVRQDFGS-IDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP--- 169 (297)
T ss_dssp TSHHHHHCCCCSHHHHHHHHHHHHSC-EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---
T ss_pred ccccccccCHHHHHHHHHHHHHHcCC-CCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc---
Confidence 3 4455554432 222 899999997421 1 23457899999999999999876421
Q ss_pred ccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------c-CCCCcEEEEcCCC
Q 037566 107 LRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------Y-SPAVTYSVHRSSI 175 (360)
Q Consensus 107 v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~-~~~~~~~ilRp~~ 175 (360)
-.+||++||...+.. . |.....|+.+|...+ . ..|+.+..++|+.
T Consensus 170 ~g~iv~isS~~~~~~---------------~---------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~ 225 (297)
T 1d7o_A 170 GGASISLTYIASERI---------------I---------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGP 225 (297)
T ss_dssp EEEEEEEECGGGTSC---------------C---------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred CceEEEEeccccccC---------------C---------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccc
Confidence 258999998754321 0 101124888776443 2 2589999999999
Q ss_pred eeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 176 IIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 176 vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
|.+|..... .... .....+.+ ..|+ + .+.+.+|+|+++++++... ...|+.+++.+|.
T Consensus 226 v~T~~~~~~-~~~~--~~~~~~~~--~~p~---~---------r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 226 LGSRAAKAI-GFID--TMIEYSYN--NAPI---Q---------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp CBCCCSSCC-SHHH--HHHHHHHH--HSSS---C---------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred cccchhhhc-cccH--HHHHHhhc--cCCC---C---------CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 999754321 1100 01111111 1221 1 2346889999998887532 2358999997774
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=6.1e-09 Score=94.20 Aligned_cols=141 Identities=16% Similarity=0.068 Sum_probs=99.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h~A~~~~~ 77 (360)
||.+++++|++ +|++|++.+|+..... .... ++.+|++|+++++++++. .. .+|+++|.|+....
T Consensus 23 IG~aia~~la~------~Ga~V~~~~r~~~~~~---~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G-~iDilVnnAG~~~~ 91 (261)
T 4h15_A 23 AGAATVSLFLE------LGAQVLTTARARPEGL---PEEL-FVEADLTTKEGCAIVAEATRQRLG-GVDVIVHMLGGSSA 91 (261)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCCTTS---CTTT-EEECCTTSHHHHHHHHHHHHHHTS-SCSEEEECCCCCCC
T ss_pred HHHHHHHHHHH------cCCEEEEEECCchhCC---CcEE-EEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCcc
Confidence 79999999999 9999999999765421 2344 799999999988776653 33 28999999984211
Q ss_pred -----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 78 -----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 78 -----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
+.+..+++|+.|+.++.+++...|+.. +-.++|++||...+. +.
T Consensus 92 ~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Iv~isS~~~~~-----------------~~------- 146 (261)
T 4h15_A 92 AGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-GSGVVVHVTSIQRVL-----------------PL------- 146 (261)
T ss_dssp CSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS-----------------CC-------
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-CCceEEEEEehhhcc-----------------CC-------
Confidence 234578999999999999887654322 235899998864321 00
Q ss_pred CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeee
Q 037566 147 PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyG 178 (360)
|....+|+.+|..-. ...|+.+..+.|+.|--
T Consensus 147 ~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T 188 (261)
T 4h15_A 147 PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIET 188 (261)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCC
Confidence 111456877664322 45689999999987743
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.88 E-value=6.7e-09 Score=94.35 Aligned_cols=199 Identities=14% Similarity=0.088 Sum_probs=125.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||..++++|++ +|++|++.+|+.... .....++. .+.+|++|+++++++++.+ . ++|.+++.|+
T Consensus 41 IG~aiA~~la~------~Ga~V~i~~r~~~~l~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G-~iDiLVNNAG 112 (273)
T 4fgs_A 41 IGLAAAKRFVA------EGARVFITGRRKDVLDAAIAEIGGGAV-GIQADSANLAELDRLYEKVKAEAG-RIDVLFVNAG 112 (273)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCTTCE-EEECCTTCHHHHHHHHHHHHHHHS-CEEEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHcCCCeE-EEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCC
Confidence 79999999999 999999999975321 00134567 8999999999887776543 2 2899999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++.+++...|+. -.++|.+||...+..
T Consensus 113 ~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~~~----------------------- 166 (273)
T 4fgs_A 113 GGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGSTG----------------------- 166 (273)
T ss_dssp CCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGGSC-----------------------
T ss_pred CCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhccC-----------------------
Confidence 5321 34567899999999999999887642 247999988643210
Q ss_pred CCCCCCCcHHHHHHHH---------h-cCCCCcEEEEcCCCeeecCCCCcch--hHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 145 RLPFPNFYYAVEDIAA---------S-YSPAVTYSVHRSSIIIGASSRSLNN--SLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~---------e-~~~~~~~~ilRp~~vyGp~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
.| ....|+.+|..- | ...|+.+-.+-|+.|--|....... ....-.....+.+ ..|+ |.
T Consensus 167 -~~-~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--~~Pl---gR-- 237 (273)
T 4fgs_A 167 -TP-AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAA--QVPM---GR-- 237 (273)
T ss_dssp -CT-TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHH--HSTT---SS--
T ss_pred -CC-CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHh--cCCC---CC--
Confidence 01 123487766432 2 4578999999999886653221110 0000011111111 1232 11
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
+...+|+|+++++++... -..|+++.|.+|-
T Consensus 238 -------~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 238 -------VGRAEEVAAAALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp -------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred -------CcCHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence 234778999998887432 2348998886664
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.80 E-value=6.8e-08 Score=86.98 Aligned_cols=195 Identities=9% Similarity=0.040 Sum_probs=122.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~ 69 (360)
||.+++++|.+ +|++|++.+|+.... .....++. ++.+|++|++++.++++. .. .+|.++
T Consensus 20 IG~aiA~~la~------~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G-~iD~lv 91 (256)
T 4fs3_A 20 IAFGVAKVLDQ------LGAKLVFTYRKERSRKELEKLLEQLNQPEAH-LYQIDVQSDEEVINGFEQIGKDVG-NIDGVY 91 (256)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSGGGHHHHHHHHGGGTCSSCE-EEECCTTCHHHHHHHHHHHHHHHC-CCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCCcEE-EEEccCCCHHHHHHHHHHHHHHhC-CCCEEE
Confidence 79999999999 999999999975321 11234678 899999999988776653 22 289999
Q ss_pred EeeeecCC----------Chh---HhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 70 WVMFQRLK----------SEE---INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 70 h~A~~~~~----------~~~---~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
|.|+.... +.+ ..+++|+.++..+..++...++ +-.+||.+||.....
T Consensus 92 nnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~---~~G~IVnisS~~~~~---------------- 152 (256)
T 4fs3_A 92 HSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP---EGGSIVATTYLGGEF---------------- 152 (256)
T ss_dssp ECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT---TCEEEEEEECGGGTS----------------
T ss_pred eccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCEEEEEecccccc----------------
Confidence 99984211 122 3458899999888888876532 225899998864221
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHH---------h-cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAA---------S-YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~---------e-~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
+ .| ....|+.+|..- | ..+|+.+..+.|+.|--|........- .....+.+ ..|+
T Consensus 153 -~-------~~-~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~---~~~~~~~~--~~Pl- 217 (256)
T 4fs3_A 153 -A-------VQ-NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFN---TILKEIKE--RAPL- 217 (256)
T ss_dssp -C-------CT-TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH---HHHHHHHH--HSTT-
T ss_pred -C-------cc-cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCH---HHHHHHHh--cCCC-
Confidence 0 01 133487766432 2 456899999999888655322211111 11111211 1232
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
| -+...+|+|+++++++... -..|+++.|.+|
T Consensus 218 --~---------R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 218 --K---------RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 251 (256)
T ss_dssp --S---------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --C---------CCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 1 1234778999988887432 234898888555
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.64 E-value=5.6e-08 Score=98.41 Aligned_cols=141 Identities=9% Similarity=-0.064 Sum_probs=89.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCC---------CC-----CCCCCCceeeEeeccCChHHHHHHHccCCC---C
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPP---------PS-----WFPSSHVDHYITFDALDSTDTTQKLSSISQ---E 64 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~---------~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~---~ 64 (360)
||++++++|++ +|++|++++|+.. .. ...... . .+.+|+.|.+++.++++.+.. .
T Consensus 31 IG~aiA~~La~------~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~-~-~~~~D~~d~~~~~~~~~~~~~~~g~ 102 (613)
T 3oml_A 31 LGREYALLFAE------RGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG-G-EAVADYNSVIDGAKVIETAIKAFGR 102 (613)
T ss_dssp HHHHHHHHHHH------TTCEEEEC--------------CHHHHHHHHHHTT-C-CEEECCCCGGGHHHHHC--------
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC-C-eEEEEeCCHHHHHHHHHHHHHHCCC
Confidence 79999999999 9999999988321 10 000112 2 345899999888877764311 2
Q ss_pred ccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCC
Q 037566 65 VTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 65 v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
+|+++|+|++... +.+..+++|+.|+.++++++...|+.. +-.+||++||.+.+...
T Consensus 103 iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-~~g~IV~isS~a~~~~~------------- 168 (613)
T 3oml_A 103 VDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-NYGRIIMTSSNSGIYGN------------- 168 (613)
T ss_dssp --CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEECCHHHHHCC-------------
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCHHHcCCC-------------
Confidence 8999999985321 234578999999999999996544322 45799999886543210
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCe
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSII 176 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~v 176 (360)
+ ....|+.+|...+ ...|+.+..+.|+.+
T Consensus 169 -----------~-~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 169 -----------F-GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA 207 (613)
T ss_dssp -----------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred -----------C-CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence 0 1345888775433 456899999999743
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.4e-07 Score=87.55 Aligned_cols=199 Identities=11% Similarity=0.015 Sum_probs=114.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCC-----------CCC----CCCCC----CceeeE------------eeccCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRP-----------PPS----WFPSS----HVDHYI------------TFDALD 50 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~-----------~~~----~~~~~----~v~~~v------------~gDl~d 50 (360)
||++++++|++ +|++|++++|++ ... ..... .++ ++ .+|++|
T Consensus 23 IG~aia~~la~------~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~Dv~~ 95 (315)
T 2o2s_A 23 YGWAIAKHLAS------AGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAG-VYPLDAAFDKPEDVPQDIKD 95 (315)
T ss_dssp HHHHHHHHHHT------TTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSC-EEECCTTCSSTTSSCHHHHT
T ss_pred hHHHHHHHHHH------CCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccc-cccccccccccchhhhhhhc
Confidence 89999999999 899999998632 000 00000 023 33 344443
Q ss_pred --------hHHHHHHHcc----CCCCccEEEEeeeecC---C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCc
Q 037566 51 --------STDTTQKLSS----ISQEVTHLFWVMFQRL---K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRL 107 (360)
Q Consensus 51 --------~~~l~~~l~~----~~~~v~~V~h~A~~~~---~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v 107 (360)
++++.++++. .. ++|+++|+|+... . +.+..+++|+.|+.++++++...++. +
T Consensus 96 ~~~~~~~d~~~v~~~~~~~~~~~g-~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~- 171 (315)
T 2o2s_A 96 NKRYAGVDGYTIKEVAVKVKQDLG-NIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE--G- 171 (315)
T ss_dssp CGGGSSCCCCSHHHHHHHHHHHHC-SEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE--E-
T ss_pred ccccccCCHHHHHHHHHHHHHhcC-CCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc--C-
Confidence 4455555442 22 2899999998531 1 23457899999999999999875421 2
Q ss_pred cEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------c-CCCCcEEEEcCCCe
Q 037566 108 RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------Y-SPAVTYSVHRSSII 176 (360)
Q Consensus 108 ~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~-~~~~~~~ilRp~~v 176 (360)
.+||++||...+.. . |.....|+.+|...+ . ..|+.+..++|+.|
T Consensus 172 g~Iv~isS~~~~~~---------------~---------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v 227 (315)
T 2o2s_A 172 GSAVTLSYLAAERV---------------V---------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPL 227 (315)
T ss_dssp EEEEEEEEGGGTSC---------------C---------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCC
T ss_pred CEEEEEeccccccc---------------C---------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccc
Confidence 58999988754321 0 101124887775433 2 26899999999988
Q ss_pred eecCCCCc----chhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 177 IGASSRSL----NNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 177 yGp~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
..+..... ...... .....+.+ ..|+ | -+...+++|+++++++... ...|+.+.+.+|.
T Consensus 228 ~T~~~~~~~~~~~~~~~~-~~~~~~~~--~~p~---~---------r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 228 KSRAASAIGKSGEKSFID-YAIDYSYN--NAPL---R---------RDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292 (315)
T ss_dssp CCHHHHHTTCSSSSCHHH-HHHHHHHH--HSSS---C---------CCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred cchhhhhccccccchhHH-HHHHHHhc--cCCC---C---------CCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence 65410000 000000 00000000 1121 1 2346888999998887532 2358888886664
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.50 E-value=3.5e-07 Score=85.32 Aligned_cols=143 Identities=13% Similarity=0.009 Sum_probs=95.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCC------------CCC----CC---CCCCceeeEeeccCCh--H--------
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRP------------PPS----WF---PSSHVDHYITFDALDS--T-------- 52 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~------------~~~----~~---~~~~v~~~v~gDl~d~--~-------- 52 (360)
||.+++++|++ +|++|++.+|++ ... .. ....+. ++.+|+++. +
T Consensus 16 IG~aiA~~la~------~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~ 88 (329)
T 3lt0_A 16 YGWGIAKELSK------RNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILD-MLPFDASFDTANDIDEETKN 88 (329)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEE-EEECCTTCSSGGGCCHHHHT
T ss_pred hHHHHHHHHHH------CCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccc-cccccccccchhhhhhhhcc
Confidence 79999999999 999999766443 000 00 112356 788888877 6
Q ss_pred ----------HHHHHHccC----CCCccEEEEeeeecC---C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCc
Q 037566 53 ----------DTTQKLSSI----SQEVTHLFWVMFQRL---K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRL 107 (360)
Q Consensus 53 ----------~l~~~l~~~----~~~v~~V~h~A~~~~---~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v 107 (360)
++.++++.+ . .+|+++|.|++.. . +....+++|+.|+.++.+++...++. +
T Consensus 89 ~~~~Dlsd~~~v~~~~~~~~~~~g-~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~- 164 (329)
T 3lt0_A 89 NKRYNMLQNYTIEDVANLIHQKYG-KINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP--Q- 164 (329)
T ss_dssp SHHHHTCCSCSHHHHHHHHHHHHC-CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--E-
T ss_pred cccccccCHHHHHHHHHHHHHhcC-CCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--C-
Confidence 666655432 2 2899999998521 1 23457899999999999999876531 2
Q ss_pred cEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cC-CCCcEEEEcCCCe
Q 037566 108 RHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YS-PAVTYSVHRSSII 176 (360)
Q Consensus 108 ~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~-~~~~~~ilRp~~v 176 (360)
.+||++||...+.. . |.....|+.+|...+ .. .++.+..+.|+.|
T Consensus 165 g~Iv~isS~~~~~~---------------~---------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v 220 (329)
T 3lt0_A 165 SSIISLTYHASQKV---------------V---------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL 220 (329)
T ss_dssp EEEEEEECGGGTSC---------------C---------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred CeEEEEeCccccCC---------------C---------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEeccee
Confidence 58999988753321 0 100114887775433 33 5899999999888
Q ss_pred eec
Q 037566 177 IGA 179 (360)
Q Consensus 177 yGp 179 (360)
--+
T Consensus 221 ~T~ 223 (329)
T 3lt0_A 221 KSR 223 (329)
T ss_dssp CCH
T ss_pred ech
Confidence 644
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.9e-07 Score=86.72 Aligned_cols=149 Identities=9% Similarity=-0.051 Sum_probs=74.8
Q ss_pred ccEEEEeeeecC---C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcC
Q 037566 65 VTHLFWVMFQRL---K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 65 v~~V~h~A~~~~---~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
+|++||+|+... . +.+..+++|+.|+.++++++...++. + .+||++||...+...
T Consensus 134 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~-g~Iv~isS~~~~~~~----------- 199 (319)
T 2ptg_A 134 IDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE--G-GSALALSYIASEKVI----------- 199 (319)
T ss_dssp EEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--E-EEEEEEEECC----------------
T ss_pred CCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc--C-ceEEEEecccccccc-----------
Confidence 899999998531 1 23457899999999999999876421 2 589999887543210
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHH--------HHh--cC-CCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDI--------AAS--YS-PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQG 202 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~--------l~e--~~-~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~ 202 (360)
|.....|+.+|. ++. .. .|+.+..++|+.|..+........... .......+...
T Consensus 200 -------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~ 265 (319)
T 2ptg_A 200 -------------PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDK-TFIDLAIDYSE 265 (319)
T ss_dssp --------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-------------------------
T ss_pred -------------CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccch-hhHHHHHHHHh
Confidence 000012555442 222 22 689999999998876531110000000 00000000000
Q ss_pred CCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 203 LPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 203 ~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
...+ ..-+...+++|+++++++... ...|+.+.+.+|..
T Consensus 266 ~~~p----------~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~ 306 (319)
T 2ptg_A 266 ANAP----------LQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH 306 (319)
T ss_dssp -----------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred ccCC----------CCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence 0001 112456889999999887532 23588888876643
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.33 E-value=7.8e-07 Score=92.55 Aligned_cols=139 Identities=14% Similarity=0.086 Sum_probs=100.2
Q ss_pred chHHHHHHHh-cCCCCCCCCcE-EEEEecCCCCCC--------C--CCCCceeeEeeccCChHHHHHHHccCCC--CccE
Q 037566 2 AGLSLAEALK-NNPTIPGGPWK-VYGTARRPPPSW--------F--PSSHVDHYITFDALDSTDTTQKLSSISQ--EVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll-~~~~~~~~g~~-V~~l~r~~~~~~--------~--~~~~v~~~v~gDl~d~~~l~~~l~~~~~--~v~~ 67 (360)
||..+++.|. + +|++ |+.++|+..... + ...++. ++.+|++|+++++++++.+.. ++|.
T Consensus 542 lG~aiA~~la~~------~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~-~~~~Dvsd~~~v~~~~~~~~~~~~id~ 614 (795)
T 3slk_A 542 LGAEVARHLVIE------RGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVS-LQACDVADRETLAKVLASIPDEHPLTA 614 (795)
T ss_dssp HHHHHHHHHHHT------SSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred cHHHHHHHHHHH------cCCcEEEEeccCccchHHHHHHHHHHHhcCCcEE-EEEeecCCHHHHHHHHHHHHHhCCCEE
Confidence 6999999999 7 8985 888888732210 0 134678 899999999999999876532 3899
Q ss_pred EEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 68 LFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 68 V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|||.|++... +.+..+++|+.|+.||.+++.. .+ +||++||.+.+- |
T Consensus 615 lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~------~l-~iV~~SS~ag~~---------g-------- 670 (795)
T 3slk_A 615 VVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP------DV-ALVLFSSVSGVL---------G-------- 670 (795)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT------TS-EEEEEEETHHHH---------T--------
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh------CC-EEEEEccHHhcC---------C--------
Confidence 9999985322 2345789999999999999843 35 899998875432 1
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh------cCCCCcEEEEcCCCeeec
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp 179 (360)
.| ....|+.+|.+.+ +..|++++.+-|+.+-.+
T Consensus 671 -------~~-g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~ 709 (795)
T 3slk_A 671 -------SG-GQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEH 709 (795)
T ss_dssp -------CS-SCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCC
T ss_pred -------CC-CCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcc
Confidence 01 1334888775544 457999999998877543
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.09 E-value=9e-06 Score=87.62 Aligned_cols=141 Identities=11% Similarity=0.033 Sum_probs=94.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEe-cCCCCCC-----C------CCCCceeeEeeccCChHHHHHHHcc---------
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTA-RRPPPSW-----F------PSSHVDHYITFDALDSTDTTQKLSS--------- 60 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~-r~~~~~~-----~------~~~~v~~~v~gDl~d~~~l~~~l~~--------- 60 (360)
||.+++++|++ +|++|++++ |+..... . ...++. ++.+|++|.+++.++++.
T Consensus 489 IGrAIAr~LA~------~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~-vV~~DVTD~esVeaLVe~I~e~~~~~G 561 (1688)
T 2pff_A 489 IGAEVLQGLLQ------GGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLI-VVPFNQGSKQDVEALIEFIYDTEKNGG 561 (1688)
T ss_dssp THHHHHHHHHH------HTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEE-EEECCSSSTTHHHHHHHHHHSCTTSSS
T ss_pred HHHHHHHHHHH------CcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEE-EEEeCCCCHHHHHHHHHHHHHhccccc
Confidence 89999999999 899999884 5432210 0 023577 899999999998887753
Q ss_pred CC-CCccEEEEeeeecCC-------C-----hhHhhhhhHHHHHHHHHHHHh--hccCCCCccEEEEeccCccccccccC
Q 037566 61 IS-QEVTHLFWVMFQRLK-------S-----EEINISNNSTMFKNVMSVVVD--SNKGRSRLRHVTLLMGTKHYMGPVFD 125 (360)
Q Consensus 61 ~~-~~v~~V~h~A~~~~~-------~-----~~~~~~vNv~gt~nll~a~~~--~~~~~~~v~r~v~~SS~~vYg~~~~~ 125 (360)
.. . +|+|||.|++... + ....+++|+.|+.++++++.. .++.. +-.+||++||...+
T Consensus 562 fG~~-IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr-ggGrIVnISSiAG~------ 633 (1688)
T 2pff_A 562 LGWD-LDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-PAQVILPMSPNHGT------ 633 (1688)
T ss_dssp CCCC-CCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS-CEEECCCCCSCTTT------
T ss_pred cCCC-CeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC-CCCEEEEEEChHhc------
Confidence 21 2 8999999985311 1 235789999999999998832 22111 22589999885321
Q ss_pred CcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeee
Q 037566 126 PSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 126 ~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyG 178 (360)
.+ ....|+.+|...+ ....+.+..+.|+.|-|
T Consensus 634 -----------~G----------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 634 -----------FG----------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp -----------SS----------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred -----------cC----------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 01 0224888886433 12237778889988875
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=2.2e-05 Score=87.01 Aligned_cols=141 Identities=11% Similarity=0.039 Sum_probs=94.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEe-cCCCCC-----------CCCCCCceeeEeeccCChHHHHHHHcc---------
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTA-RRPPPS-----------WFPSSHVDHYITFDALDSTDTTQKLSS--------- 60 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~-r~~~~~-----------~~~~~~v~~~v~gDl~d~~~l~~~l~~--------- 60 (360)
||.+++++|++ +|++|++++ |+.... .....++. ++.+|++|.+++.++++.
T Consensus 688 IG~aIA~~La~------~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~-~v~~DVsd~~sV~alv~~i~~~~~~~G 760 (1887)
T 2uv8_A 688 IGAEVLQGLLQ------GGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLI-VVPFNQGSKQDVEALIEFIYDTEKNGG 760 (1887)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEE-EEECCTTCHHHHHHHHHHHHSCTTTTS
T ss_pred HHHHHHHHHHH------CCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEE-EEEecCCCHHHHHHHHHHHHHhccccc
Confidence 89999999999 899999985 433211 00134577 899999999998877753
Q ss_pred CC-CCccEEEEeeeecCC-------C-----hhHhhhhhHHHHHHHHHHHHhh--ccCCCCccEEEEeccCccccccccC
Q 037566 61 IS-QEVTHLFWVMFQRLK-------S-----EEINISNNSTMFKNVMSVVVDS--NKGRSRLRHVTLLMGTKHYMGPVFD 125 (360)
Q Consensus 61 ~~-~~v~~V~h~A~~~~~-------~-----~~~~~~vNv~gt~nll~a~~~~--~~~~~~v~r~v~~SS~~vYg~~~~~ 125 (360)
.. . +|+|||+|++... + .+..+++|+.|+.++++++... ++.. +-.+||++||...+.
T Consensus 761 ~G~~-LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~-~~G~IVnISS~ag~~----- 833 (1887)
T 2uv8_A 761 LGWD-LDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-PAQVILPMSPNHGTF----- 833 (1887)
T ss_dssp CCCC-CSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC-CEEEEEEECSCTTCS-----
T ss_pred cCCC-CeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC-CCCEEEEEcChHhcc-----
Confidence 21 2 8999999985321 2 2357899999999999987432 1111 235899998864221
Q ss_pred CcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHH---------h-cCCCCcEEEEcCCCeee
Q 037566 126 PSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAA---------S-YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 126 ~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~---------e-~~~~~~~~ilRp~~vyG 178 (360)
+ ....|+.+|... + ....+.+..+.|+.|-|
T Consensus 834 ------------g----------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 834 ------------G----------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp ------------S----------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred ------------C----------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 1 022388777432 2 12238899999999985
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.7e-05 Score=87.77 Aligned_cols=204 Identities=12% Similarity=0.047 Sum_probs=121.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------------CCCCCCceeeEeeccCChHHHHHHHcc-------CC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------------WFPSSHVDHYITFDALDSTDTTQKLSS-------IS 62 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------------~~~~~~v~~~v~gDl~d~~~l~~~l~~-------~~ 62 (360)
||.+++++|++ +|++|++++++.... .....++. ++.+|++|++++.++++. ..
T Consensus 665 IG~aIAr~LA~------~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~-~v~~DVsd~esV~alv~~i~~~~~~~G 737 (1878)
T 2uv9_A 665 IGAEVLQGLLS------GGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLV-VVPFNQGSKQDVEALVNYIYDTKNGLG 737 (1878)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEE-EEECCTTCHHHHHHHHHHHHCSSSSCC
T ss_pred HHHHHHHHHHH------CCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEE-EEEcCCCCHHHHHHHHHHHHHhhcccC
Confidence 89999999999 899999986543210 00134578 899999999998887753 22
Q ss_pred -CCccEEEEeeeecCC-------C-----hhHhhhhhHHHHHHHHHHHH--hhccCCCCccEEEEeccCccccccccCCc
Q 037566 63 -QEVTHLFWVMFQRLK-------S-----EEINISNNSTMFKNVMSVVV--DSNKGRSRLRHVTLLMGTKHYMGPVFDPS 127 (360)
Q Consensus 63 -~~v~~V~h~A~~~~~-------~-----~~~~~~vNv~gt~nll~a~~--~~~~~~~~v~r~v~~SS~~vYg~~~~~~~ 127 (360)
. +|+|||+|++... + ....+++|+.|+.+++++++ ..++.. +-.+||++||...+.
T Consensus 738 ~~-IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~-~~G~IVnISS~ag~~------- 808 (1878)
T 2uv9_A 738 WD-LDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETR-PAQVILPLSPNHGTF------- 808 (1878)
T ss_dssp CC-CSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSC-CEEECCEECSCSSSS-------
T ss_pred CC-CcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC-CCCEEEEEcchhhcc-------
Confidence 2 8999999985321 2 24578999999999988743 222111 236899998864221
Q ss_pred ccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHH
Q 037566 128 LVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATI 197 (360)
Q Consensus 128 ~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~ 197 (360)
+ . ...|+.+|...+ ...++.+..+.|+.|-|-.. +..... ....+
T Consensus 809 ----------g------g----~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m---~~~~~~--~~~~~ 863 (1878)
T 2uv9_A 809 ----------G------N----DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGL---MSANNL--VAEGV 863 (1878)
T ss_dssp ----------S------C----CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTS---CSHHHH--THHHH
T ss_pred ----------C------C----chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcc---cccchh--hHHHH
Confidence 1 0 123888775433 12238889999988863111 111000 00111
Q ss_pred HhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC---CCCCceecc-CCC---cccHHHHHHHHH
Q 037566 198 CRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR---AKNQAFNCT-NGD---VFTWKSLWKLLS 262 (360)
Q Consensus 198 ~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~---~~g~~yni~-~g~---~~s~~el~~~ia 262 (360)
+ ..++ -....+++|+++++++.... ..|+.+++. ||. ...+.++...+.
T Consensus 864 -~--~~pl-------------r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~lr 919 (1878)
T 2uv9_A 864 -E--KLGV-------------RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKLR 919 (1878)
T ss_dssp -H--TTTC-------------CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHHH
T ss_pred -H--hcCC-------------CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHHH
Confidence 1 1111 11257889988887764321 237877763 333 234566655443
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=97.91 E-value=5.5e-06 Score=64.38 Aligned_cols=86 Identities=13% Similarity=0.040 Sum_probs=65.5
Q ss_pred chHHHHHHHhcCCCCCCCC-cEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCCh
Q 037566 2 AGLSLAEALKNNPTIPGGP-WKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSE 79 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~ 79 (360)
+|+++++.|++ .| ++|++++|++... .....+++ ++.+|+.|.+++.+++++ +|+|||+++..
T Consensus 16 iG~~~~~~l~~------~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~----~d~vi~~~~~~---- 80 (118)
T 3ic5_A 16 IGQMIAALLKT------SSNYSVTVADHDLAALAVLNRMGVA-TKQVDAKDEAGLAKALGG----FDAVISAAPFF---- 80 (118)
T ss_dssp HHHHHHHHHHH------CSSEEEEEEESCHHHHHHHHTTTCE-EEECCTTCHHHHHHHTTT----CSEEEECSCGG----
T ss_pred HHHHHHHHHHh------CCCceEEEEeCCHHHHHHHHhCCCc-EEEecCCCHHHHHHHHcC----CCEEEECCCch----
Confidence 79999999999 88 9999999975431 11135678 899999999999999886 58999987421
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccC
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGT 116 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~ 116 (360)
.+.++++++.+. ++++|.+.++.
T Consensus 81 ---------~~~~~~~~~~~~-----g~~~~~~~~~~ 103 (118)
T 3ic5_A 81 ---------LTPIIAKAAKAA-----GAHYFDLTEDV 103 (118)
T ss_dssp ---------GHHHHHHHHHHT-----TCEEECCCSCH
T ss_pred ---------hhHHHHHHHHHh-----CCCEEEecCcH
Confidence 146788888876 78877765443
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.77 E-value=2.3e-05 Score=79.10 Aligned_cols=186 Identities=9% Similarity=-0.033 Sum_probs=113.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CC--CCCCceeeEeecc-CChHHH-HHHHccCCCCccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WF--PSSHVDHYITFDA-LDSTDT-TQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~--~~~~v~~~v~gDl-~d~~~l-~~~l~~~~~~v~~V~h~A~~ 74 (360)
||..++++|.+ +|++|++.+|+.... .. ....+. .+.+|+ .+.+.+ +++.+.... +|+++|.|++
T Consensus 334 IG~a~A~~la~------~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~-~~~~Dv~~~~~~~~~~~~~~~G~-iDiLVnNAGi 405 (604)
T 2et6_A 334 LGKEYAKWFAK------YGAKVVVNDFKDATKTVDEIKAAGGEAW-PDQHDVAKDSEAIIKNVIDKYGT-IDILVNNAGI 405 (604)
T ss_dssp HHHHHHHHHHH------TTCEEEEECSSCCHHHHHHHHHTTCEEE-EECCCHHHHHHHHHHHHHHHHSC-CCEEEECCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCccHHHHHHHHHhcCCeEE-EEEcChHHHHHHHHHHHHHhcCC-CCEEEECCCC
Confidence 79999999999 999999988743211 00 123455 678888 665443 334443332 8999999985
Q ss_pred cCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 75 RLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 75 ~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
... +.+..+++|+.|+.++.+++...++.. +-.+||++||.+.+- | .
T Consensus 406 ~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS~ag~~---------~------~-------- 461 (604)
T 2et6_A 406 LRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-QFGRIINITSTSGIY---------G------N-------- 461 (604)
T ss_dssp CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCHHHHS---------C------C--------
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhcc---------C------C--------
Confidence 321 234578999999999999987654312 235899998864321 0 0
Q ss_pred CCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 146 LPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
+ ....|+.+|..-. ...|+.+..+.|+ + ... +... . .....
T Consensus 462 -~-~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG-~----~T~-m~~~----~-------~~~~~---------- 512 (604)
T 2et6_A 462 -F-GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH-A----ETA-MTLS----I-------MREQD---------- 512 (604)
T ss_dssp -T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-C----CCC-C------------------------------
T ss_pred -C-CChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC-C----CCc-cccc----c-------Cchhh----------
Confidence 1 1334887775322 4568999999996 2 111 2100 0 00000
Q ss_pred ccccccCHHHHHHHHHHHHcCCC-CCCCceeccCCC
Q 037566 216 HFCDMSDSRVLAEQQIWAATTDR-AKNQAFNCTNGD 250 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~~-~~g~~yni~~g~ 250 (360)
.+....+++|.++++++.... ..|+++.+.+|.
T Consensus 513 --~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG~ 546 (604)
T 2et6_A 513 --KNLYHADQVAPLLVYLGTDDVPVTGETFEIGGGW 546 (604)
T ss_dssp --CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEETTE
T ss_pred --ccCCCHHHHHHHHHHHhCCccCCCCcEEEECCCe
Confidence 112356678888777764322 458999887774
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=7.8e-05 Score=86.19 Aligned_cols=140 Identities=14% Similarity=0.017 Sum_probs=93.8
Q ss_pred chHHHHHHHhcCCCCCCCCcE-EEEEecCCCCC-----C---C--CCCCceeeEeeccCChHHHHHHHccCC--CCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWK-VYGTARRPPPS-----W---F--PSSHVDHYITFDALDSTDTTQKLSSIS--QEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~-V~~l~r~~~~~-----~---~--~~~~v~~~v~gDl~d~~~l~~~l~~~~--~~v~~V 68 (360)
||..+++.|++ +|++ |+.++|+.... . + ...++. ++.+|++|.+++.++++.+. .++|.|
T Consensus 1896 IG~aia~~la~------~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~-~~~~Dvsd~~~v~~~~~~~~~~g~id~l 1968 (2512)
T 2vz8_A 1896 FGLQLAQWLRL------RGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVL-VSTSNASSLDGARSLITEATQLGPVGGV 1968 (2512)
T ss_dssp HHHHHHHHHHH------TTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEE-EECCCSSSHHHHHHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHH------CCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEE-EEecCCCCHHHHHHHHHHHHhcCCCcEE
Confidence 79999999999 8997 77778875431 0 0 123567 88999999998877765431 138999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
||.|++... +....+++|+.|+.++.+++...+ +...+||++||.+... |
T Consensus 1969 VnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~---~~~g~iV~iSS~ag~~---------g--------- 2027 (2512)
T 2vz8_A 1969 FNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREAC---PELDYFVIFSSVSCGR---------G--------- 2027 (2512)
T ss_dssp EECCCC----------------CTTTTHHHHHHHHHHHHHHC---TTCCEEEEECCHHHHT---------T---------
T ss_pred EECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCEEEEecchhhcC---------C---------
Confidence 999985321 334578999999999998887652 2457999998864321 1
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh------cCCCCcEEEEcCCCe
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS------YSPAVTYSVHRSSII 176 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~v 176 (360)
.+ ....|+.+|...+ +..|++...+-.+.+
T Consensus 2028 ------~~-g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2028 ------NA-GQANYGFANSAMERICEKRRHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp ------CT-TCHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCB
T ss_pred ------CC-CcHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCc
Confidence 01 1234888886544 345788777766544
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00028 Score=65.56 Aligned_cols=97 Identities=12% Similarity=0.029 Sum_probs=68.4
Q ss_pred CchHHHHHHHhcCCCCCCCC--cEEEEEecCCCCC---CCCC--CCceeeEeeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGP--WKVYGTARRPPPS---WFPS--SHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~~---~~~~--~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
+||++++..|++ +| ++|+++++++... .+.+ .... +.+ +.+..++.++++++ |.|||+|+
T Consensus 19 ~VG~~la~~L~~------~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~--v~~-~~~t~d~~~al~ga----DvVi~~ag 85 (326)
T 1smk_A 19 GIGQPLAMLMKM------NPLVSVLHLYDVVNAPGVTADISHMDTGAV--VRG-FLGQQQLEAALTGM----DLIIVPAG 85 (326)
T ss_dssp TTHHHHHHHHHH------CTTEEEEEEEESSSHHHHHHHHHTSCSSCE--EEE-EESHHHHHHHHTTC----SEEEECCC
T ss_pred hHHHHHHHHHHh------CCCCCEEEEEeCCCcHhHHHHhhcccccce--EEE-EeCCCCHHHHcCCC----CEEEEcCC
Confidence 589999999998 77 8899998765310 0000 1112 222 33456788889985 79999998
Q ss_pred ecC---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEecc
Q 037566 74 QRL---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMG 115 (360)
Q Consensus 74 ~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS 115 (360)
... .+..++..+|+.+++++++++.+. +++.+|+.+|
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-----~p~~~viv~S 125 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKC-----CPRAIVNLIS 125 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-----CTTSEEEECC
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-----CCCeEEEEEC
Confidence 532 234678899999999999999997 5677777764
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00015 Score=73.12 Aligned_cols=138 Identities=9% Similarity=-0.106 Sum_probs=86.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCC--------C-C-----CCCCCCceeeEeeccCChHHHHH----HHccCCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPP--------P-S-----WFPSSHVDHYITFDALDSTDTTQ----KLSSISQ 63 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~--------~-~-----~~~~~~v~~~v~gDl~d~~~l~~----~l~~~~~ 63 (360)
||..++++|++ +|++|++.+|+.. . . .....+-+ ..+|+.|.+++++ +++....
T Consensus 20 IG~a~A~~la~------~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~--~~~d~~d~~~~~~~v~~~~~~~G~ 91 (604)
T 2et6_A 20 LGKYYSLEFAK------LGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV--AVADYNNVLDGDKIVETAVKNFGT 91 (604)
T ss_dssp HHHHHHHHHHH------TTCEEEEECC-----------CHHHHHHHHHHHTTCE--EEEECCCTTCHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe--EEEEcCCHHHHHHHHHHHHHHcCC
Confidence 79999999999 9999999887541 1 0 00001112 3357777654333 3333332
Q ss_pred CccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCC
Q 037566 64 EVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIG 134 (360)
Q Consensus 64 ~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~ 134 (360)
+|+++|.|++... +.+..+++|+.|+.++.+++...|+.. +-.+||.+||.+.+- |
T Consensus 92 -iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-~~G~IVnisS~ag~~---------~---- 156 (604)
T 2et6_A 92 -VHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-KYGRIVNTSSPAGLY---------G---- 156 (604)
T ss_dssp -CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHH---------C----
T ss_pred -CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCHHHcC---------C----
Confidence 8999999985321 234578999999999999987654311 235899998864321 0
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCC
Q 037566 135 HDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSS 174 (360)
Q Consensus 135 ~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~ 174 (360)
. | ....|+.+|..-. ...|+.+..+.|+
T Consensus 157 --~---------~-~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 157 --N---------F-GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp --C---------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred --C---------C-CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 0 1 1234887775322 4568999999994
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=97.40 E-value=8e-05 Score=69.32 Aligned_cols=99 Identities=9% Similarity=-0.041 Sum_probs=70.1
Q ss_pred CchHHHHHHHhcCCCCCCCCc-------EEEEEecC----CCCC-----CCCCCCceeeEeeccCChHHHHHHHccCCCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPW-------KVYGTARR----PPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSISQE 64 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~-------~V~~l~r~----~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~ 64 (360)
+||++++..|+. +|+ +|+.+++. .... .+.+.... + .+|+....++.++++++
T Consensus 16 ~VG~~l~~~L~~------~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~-~-~~~i~~~~~~~~al~~a--- 84 (329)
T 1b8p_A 16 QICYSLLFRIAN------GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFP-L-LAGMTAHADPMTAFKDA--- 84 (329)
T ss_dssp HHHHHHHHHHHT------TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCT-T-EEEEEEESSHHHHTTTC---
T ss_pred hHHHHHHHHHHh------CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccc-c-cCcEEEecCcHHHhCCC---
Confidence 479999999998 664 79998876 2100 01111123 3 35777667788899985
Q ss_pred ccEEEEeeeecC---CChhHhhhhhHHHHHHHHHHHHhhccCCCCcc-EEEEecc
Q 037566 65 VTHLFWVMFQRL---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLR-HVTLLMG 115 (360)
Q Consensus 65 v~~V~h~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~-r~v~~SS 115 (360)
|.|||+|+... .+..++...|+.+++++++++.+. + +++ +|+++|.
T Consensus 85 -D~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~---~-~p~a~ii~~SN 134 (329)
T 1b8p_A 85 -DVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAV---A-SRNIKVLVVGN 134 (329)
T ss_dssp -SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH---S-CTTCEEEECSS
T ss_pred -CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh---c-CCCeEEEEccC
Confidence 78999998533 256678899999999999999987 3 144 7888764
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00076 Score=64.63 Aligned_cols=65 Identities=9% Similarity=0.102 Sum_probs=48.2
Q ss_pred chHH--HHHHHhcCCCCCCCCcEEEEEecCCCCCC-------------------CCCCCceeeEeeccCChHHHHHHHcc
Q 037566 2 AGLS--LAEALKNNPTIPGGPWKVYGTARRPPPSW-------------------FPSSHVDHYITFDALDSTDTTQKLSS 60 (360)
Q Consensus 2 iG~~--lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------------------~~~~~v~~~v~gDl~d~~~l~~~l~~ 60 (360)
||.+ ++++|.+ +|++|++++|+..... .....+. .+.+|++|+++++++++.
T Consensus 72 IG~A~aia~ala~------~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~Dvtd~~~v~~~v~~ 144 (418)
T 4eue_A 72 FGLATRISVAFGG------PEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAK-NFIEDAFSNETKDKVIKY 144 (418)
T ss_dssp HHHHHHHHHHHSS------SCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEE-EEESCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh------CCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEE-EEEeeCCCHHHHHHHHHH
Confidence 6888 9999988 8999999998643210 0123577 899999999888776653
Q ss_pred ----CCCCccEEEEeeee
Q 037566 61 ----ISQEVTHLFWVMFQ 74 (360)
Q Consensus 61 ----~~~~v~~V~h~A~~ 74 (360)
.. .+|+++|.|+.
T Consensus 145 i~~~~G-~IDiLVnNAG~ 161 (418)
T 4eue_A 145 IKDEFG-KIDLFVYSLAA 161 (418)
T ss_dssp HHHTTC-CEEEEEECCCC
T ss_pred HHHHcC-CCCEEEECCcc
Confidence 23 38999999875
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0014 Score=62.53 Aligned_cols=66 Identities=15% Similarity=0.097 Sum_probs=47.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCC-------------------CCCCceeeEeeccCChHHHHHHHc---
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWF-------------------PSSHVDHYITFDALDSTDTTQKLS--- 59 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~-------------------~~~~v~~~v~gDl~d~~~l~~~l~--- 59 (360)
||.+++++|.+ ..|++|++++|+...... ....+. .+.+|++|+++++++++
T Consensus 73 IG~AiA~~LA~-----~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~-~i~~Dvtd~~~v~~~v~~i~ 146 (422)
T 3s8m_A 73 YGLASRITAAF-----GFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSK-SINGDAFSDAARAQVIELIK 146 (422)
T ss_dssp HHHHHHHHHHH-----HHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEE-EEESCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----hCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHH
Confidence 79999999985 158999999887543110 123466 78999999988776654
Q ss_pred -cC-CCCccEEEEeeee
Q 037566 60 -SI-SQEVTHLFWVMFQ 74 (360)
Q Consensus 60 -~~-~~~v~~V~h~A~~ 74 (360)
.. . .+|.++|.|+.
T Consensus 147 ~~~~G-~IDiLVNNAG~ 162 (422)
T 3s8m_A 147 TEMGG-QVDLVVYSLAS 162 (422)
T ss_dssp HHSCS-CEEEEEECCCC
T ss_pred HHcCC-CCCEEEEcCcc
Confidence 23 3 38999999875
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00096 Score=63.26 Aligned_cols=146 Identities=9% Similarity=-0.033 Sum_probs=90.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------------------CCCCCceeeEeeccCChHHHHHHHcc--
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------------------FPSSHVDHYITFDALDSTDTTQKLSS-- 60 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------------------~~~~~v~~~v~gDl~d~~~l~~~l~~-- 60 (360)
||.+++++|++ +.|++|++++|+..... .....+. .+.+|++|++++.++++.
T Consensus 59 IG~AiA~~LA~-----g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~-~i~~Dvtd~~~v~~~v~~i~ 132 (405)
T 3zu3_A 59 YGLAARITAAF-----GCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAK-SINGDAFSDEIKQLTIDAIK 132 (405)
T ss_dssp HHHHHHHHHHH-----HHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEE-EEESCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----hcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHH
Confidence 79999999985 15899999987643210 0123466 799999999988776653
Q ss_pred --CCCCccEEEEeeeec---------------------------------------C-CC---hhHhhhhhHHHHH-HHH
Q 037566 61 --ISQEVTHLFWVMFQR---------------------------------------L-KS---EEINISNNSTMFK-NVM 94 (360)
Q Consensus 61 --~~~~v~~V~h~A~~~---------------------------------------~-~~---~~~~~~vNv~gt~-nll 94 (360)
.. .+|.++|.|+.. . .+ .+..+++|..++. .++
T Consensus 133 ~~~G-~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~ 211 (405)
T 3zu3_A 133 QDLG-QVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWI 211 (405)
T ss_dssp HHTS-CEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHH
T ss_pred HHcC-CCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHHHHH
Confidence 33 389999998752 0 02 2235677777665 566
Q ss_pred HHHHhh-ccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cC
Q 037566 95 SVVVDS-NKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YS 163 (360)
Q Consensus 95 ~a~~~~-~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~ 163 (360)
+++... +. ..+ .++|.+||..... + .|.. ....|+.+|..-+ ..
T Consensus 212 ~~~~~~~m~-~~g-G~IVniSSi~~~~---------~------------~p~~--~~~aY~AaKaal~~ltrsLA~Ela~ 266 (405)
T 3zu3_A 212 DALLDAGVL-AEG-AQTTAFTYLGEKI---------T------------HDIY--WNGSIGAAKKDLDQKVLAIRESLAA 266 (405)
T ss_dssp HHHHHHTCE-EEE-EEEEEEECCCCGG---------G------------TTTT--TTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhh-hCC-cEEEEEeCchhhC---------c------------CCCc--cchHHHHHHHHHHHHHHHHHHHhCc
Confidence 665432 11 012 4788888864221 0 0100 0245887664322 45
Q ss_pred C-CCcEEEEcCCCeeec
Q 037566 164 P-AVTYSVHRSSIIIGA 179 (360)
Q Consensus 164 ~-~~~~~ilRp~~vyGp 179 (360)
. |+.+.++-|+.|--+
T Consensus 267 ~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 267 HGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp TTSCEEEEEECCCCCCH
T ss_pred ccCeEEEEEEeCCCcCc
Confidence 6 899999999877544
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00014 Score=66.80 Aligned_cols=92 Identities=7% Similarity=-0.045 Sum_probs=61.1
Q ss_pred CchHHHHHHHhcCCCCCCCCc--EEEEEec--CCCCCCCCCCCceeeEeeccCChHH----------HHHHHccCCCCcc
Q 037566 1 MAGLSLAEALKNNPTIPGGPW--KVYGTAR--RPPPSWFPSSHVDHYITFDALDSTD----------TTQKLSSISQEVT 66 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~--~V~~l~r--~~~~~~~~~~~v~~~v~gDl~d~~~----------l~~~l~~~~~~v~ 66 (360)
++|++|+..|+. +|+ +++.+++ .+. +++ -+.+|+.+... -.+++++ .|
T Consensus 11 ~vG~~l~~~L~~------~~~~~el~L~Di~~~~~-------~~~-~~~~dl~~~~~~~~~~~v~~~~~~a~~~----aD 72 (303)
T 1o6z_A 11 TVGAAAGYNIAL------RDIADEVVFVDIPDKED-------DTV-GQAADTNHGIAYDSNTRVRQGGYEDTAG----SD 72 (303)
T ss_dssp HHHHHHHHHHHH------TTCCSEEEEECCGGGHH-------HHH-HHHHHHHHHHTTTCCCEEEECCGGGGTT----CS
T ss_pred hHHHHHHHHHHh------CCCCCEEEEEcCCCChh-------hHH-HHHHHHHHHHhhCCCcEEEeCCHHHhCC----CC
Confidence 378999999987 564 5777776 321 111 11223322100 0345666 47
Q ss_pred EEEEeeeecC---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEecc
Q 037566 67 HLFWVMFQRL---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMG 115 (360)
Q Consensus 67 ~V~h~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS 115 (360)
.|||+|+... .+..++...|+.+++++++++.+. +++.+++++|
T Consensus 73 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-----~p~~~viv~S 119 (303)
T 1o6z_A 73 VVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-----NDDYISLTTS 119 (303)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-----CSCCEEEECC
T ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----CCCcEEEEeC
Confidence 9999998532 245678899999999999999987 5677887754
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00018 Score=66.51 Aligned_cols=97 Identities=7% Similarity=-0.044 Sum_probs=63.0
Q ss_pred CchHHHHHHHhcCCCCCCCCc--EEEEEec--CCCCC-----CCCCCCceee--EeeccCCh-HHHHHHHccCCCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPW--KVYGTAR--RPPPS-----WFPSSHVDHY--ITFDALDS-TDTTQKLSSISQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~--~V~~l~r--~~~~~-----~~~~~~v~~~--v~gDl~d~-~~l~~~l~~~~~~v~~V 68 (360)
+||++|+..|+. +|. +++.+++ ..... .+.+ ... + ...++++. +++.++++++ |.|
T Consensus 11 ~vG~~l~~~L~~------~~~~~el~L~Di~~~~~~~~~~~~dl~~-~~~-~~~~~~~i~~~~d~l~~al~ga----D~V 78 (313)
T 1hye_A 11 RVGSATALLLAK------EPFMKDLVLIGREHSINKLEGLREDIYD-ALA-GTRSDANIYVESDENLRIIDES----DVV 78 (313)
T ss_dssp HHHHHHHHHHHT------CTTCCEEEEEECGGGHHHHHHHHHHHHH-HHT-TSCCCCEEEEEETTCGGGGTTC----SEE
T ss_pred hhHHHHHHHHHh------CCCCCEEEEEcCCCchhhhHHHHHHHHH-hHH-hcCCCeEEEeCCcchHHHhCCC----CEE
Confidence 479999999998 564 5777776 32100 0000 000 0 11233322 2356678885 799
Q ss_pred EEeeeecC---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEecc
Q 037566 69 FWVMFQRL---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMG 115 (360)
Q Consensus 69 ~h~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS 115 (360)
||+|+... .+..+++.+|+.+++++++++.+. + +++++.+|
T Consensus 79 i~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-----~-~~~vlv~S 122 (313)
T 1hye_A 79 IITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-----C-DTKIFVIT 122 (313)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-----C-CCEEEECS
T ss_pred EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-----C-CeEEEEec
Confidence 99998532 245678999999999999999998 5 77777765
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0033 Score=50.03 Aligned_cols=91 Identities=8% Similarity=0.028 Sum_probs=59.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHH-HccCCCCccEEEEeeeecCCCh
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQK-LSSISQEVTHLFWVMFQRLKSE 79 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~-l~~~~~~v~~V~h~A~~~~~~~ 79 (360)
+|+.+++.|.+ .|++|++++|++... .....+.. .+.+|.+|.+.+.++ +++ +|.|++++.. +
T Consensus 17 iG~~~a~~l~~------~g~~v~~~d~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~~----~d~vi~~~~~---~- 81 (144)
T 2hmt_A 17 FGGSIVKELHR------MGHEVLAVDINEEKVNAYASYATH-AVIANATEENELLSLGIRN----FEYVIVAIGA---N- 81 (144)
T ss_dssp HHHHHHHHHHH------TTCCCEEEESCHHHHHTTTTTCSE-EEECCTTCHHHHHTTTGGG----CSEEEECCCS---C-
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHhCCE-EEEeCCCCHHHHHhcCCCC----CCEEEECCCC---c-
Confidence 69999999998 899999999864321 11223457 788999998877765 555 5788877542 1
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccc
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHY 119 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vY 119 (360)
.+.|. .+.+.+++. ++++++..++...|
T Consensus 82 ---~~~~~----~~~~~~~~~-----~~~~ii~~~~~~~~ 109 (144)
T 2hmt_A 82 ---IQAST----LTTLLLKEL-----DIPNIWVKAQNYYH 109 (144)
T ss_dssp ---HHHHH----HHHHHHHHT-----TCSEEEEECCSHHH
T ss_pred ---hHHHH----HHHHHHHHc-----CCCeEEEEeCCHHH
Confidence 12333 345556665 56677766554433
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0024 Score=61.95 Aligned_cols=89 Identities=12% Similarity=0.106 Sum_probs=62.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--CC-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--WF-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
.+|++++++|++ .|++|++.+|++... .. ...+++ .+.+|++|.+++.+++++ +|.|+|+|+....
T Consensus 13 ~iG~~ia~~L~~------~G~~V~v~~R~~~~a~~la~~~~~~~-~~~~Dv~d~~~l~~~l~~----~DvVIn~a~~~~~ 81 (450)
T 1ff9_A 13 FVTRPTLDVLTD------SGIKVTVACRTLESAKKLSAGVQHST-PISLDVNDDAALDAEVAK----HDLVISLIPYTFH 81 (450)
T ss_dssp TTHHHHHHHHHT------TTCEEEEEESSHHHHHHTTTTCTTEE-EEECCTTCHHHHHHHHTT----SSEEEECCC--CH
T ss_pred HHHHHHHHHHHh------CcCEEEEEECCHHHHHHHHHhcCCce-EEEeecCCHHHHHHHHcC----CcEEEECCccccc
Confidence 479999999998 899999999874321 11 112477 889999999999998886 5899999874321
Q ss_pred C--hhHhhh--hh-------HHHHHHHHHHHHhh
Q 037566 78 S--EEINIS--NN-------STMFKNVMSVVVDS 100 (360)
Q Consensus 78 ~--~~~~~~--vN-------v~gt~nll~a~~~~ 100 (360)
. ....++ +| ..++.+++++|+++
T Consensus 82 ~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a 115 (450)
T 1ff9_A 82 ATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA 115 (450)
T ss_dssp HHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT
T ss_pred hHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC
Confidence 1 111111 22 34788999999886
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.016 Score=67.69 Aligned_cols=92 Identities=10% Similarity=-0.036 Sum_probs=66.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC-----C-------CCCCCCceeeEeeccCChHHHHHHHccC--------
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP-----S-------WFPSSHVDHYITFDALDSTDTTQKLSSI-------- 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~-----~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~-------- 61 (360)
||.+++++|++ +|++|++.+|+... . ......+. .+.+|++|+++++++++.+
T Consensus 2149 IG~AiA~~La~------~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~-~v~~Dvtd~~~v~~lv~~i~~~~~~~f 2221 (3089)
T 3zen_D 2149 IAASVVGQLLD------GGATVIATTSRLDDDRLAFYKQLYRDHARFDATLW-VVPANMASYSDIDKLVEWVGTEQTESL 2221 (3089)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEE-EEECCTTCHHHHHHHHHHHTSCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEE-EEEecCCCHHHHHHHHHHHHhhhhhhc
Confidence 79999999999 99999999987543 0 01123466 7899999999988775432
Q ss_pred CCCccEEEEeeee----cC----------CCh----hHhhhhhHHHHHHHHHHHHhhc
Q 037566 62 SQEVTHLFWVMFQ----RL----------KSE----EINISNNSTMFKNVMSVVVDSN 101 (360)
Q Consensus 62 ~~~v~~V~h~A~~----~~----------~~~----~~~~~vNv~gt~nll~a~~~~~ 101 (360)
. .+|.++|.|+. .. .+. +..+++|+.++..++.++...+
T Consensus 2222 G-~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m 2278 (3089)
T 3zen_D 2222 G-PQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIG 2278 (3089)
T ss_dssp S-SSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred C-CCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 37899999985 10 011 2237899999999988876643
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.012 Score=46.90 Aligned_cols=61 Identities=16% Similarity=0.168 Sum_probs=44.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
+|+++++.|.+ .|++|+++++++... .....++. ++.+|.+|++.+.++ +++. .|.|+.+.
T Consensus 17 iG~~la~~L~~------~g~~V~~id~~~~~~~~~~~~~~~-~~~gd~~~~~~l~~~--~~~~-~d~vi~~~ 78 (141)
T 3llv_A 17 AGVGLVRELTA------AGKKVLAVDKSKEKIELLEDEGFD-AVIADPTDESFYRSL--DLEG-VSAVLITG 78 (141)
T ss_dssp HHHHHHHHHHH------TTCCEEEEESCHHHHHHHHHTTCE-EEECCTTCHHHHHHS--CCTT-CSEEEECC
T ss_pred HHHHHHHHHHH------CCCeEEEEECCHHHHHHHHHCCCc-EEECCCCCHHHHHhC--Cccc-CCEEEEec
Confidence 69999999999 899999999875431 11124677 899999999988775 2222 57776553
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=95.13 E-value=0.013 Score=46.24 Aligned_cols=60 Identities=12% Similarity=0.008 Sum_probs=43.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-C-CCCCceeeEeeccCChHHHHHH-HccCCCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-F-PSSHVDHYITFDALDSTDTTQK-LSSISQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~-~~~~v~~~v~gDl~d~~~l~~~-l~~~~~~v~~V~h~A 72 (360)
+|+++++.|.+ .|++|++++|++.... . ...++. ++.+|.++.+.+.++ +++ .|.|+++.
T Consensus 15 iG~~~a~~L~~------~g~~v~~~d~~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~~----~d~vi~~~ 77 (140)
T 1lss_A 15 VGYTLAKSLSE------KGHDIVLIDIDKDICKKASAEIDAL-VINGDCTKIKTLEDAGIED----ADMYIAVT 77 (140)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSHHHHHHTTTTT----CSEEEECC
T ss_pred HHHHHHHHHHh------CCCeEEEEECCHHHHHHHHHhcCcE-EEEcCCCCHHHHHHcCccc----CCEEEEee
Confidence 69999999998 8999999998753210 1 112567 789999998877654 444 57888874
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=94.76 E-value=0.16 Score=41.06 Aligned_cols=60 Identities=10% Similarity=-0.028 Sum_probs=44.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCC-CCCceeeEeeccCChHHHHHH-HccCCCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFP-SSHVDHYITFDALDSTDTTQK-LSSISQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~-~~~v~~~v~gDl~d~~~l~~~-l~~~~~~v~~V~h~A 72 (360)
+|+.+++.|.+ .|++|++++|++... ... ..++. .+.+|..+++.+.++ +++ .|.|+-+.
T Consensus 30 iG~~la~~L~~------~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~~~~~l~~~~~~~----ad~Vi~~~ 92 (155)
T 2g1u_A 30 LGSLIANLASS------SGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAAEFETLKECGMEK----ADMVFAFT 92 (155)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCGGGGGGSCTTCCSE-EEESCTTSHHHHHTTTGGG----CSEEEECS
T ss_pred HHHHHHHHHHh------CCCeEEEEECCHHHHHHHHhcCCCc-EEEecCCCHHHHHHcCccc----CCEEEEEe
Confidence 68999999998 899999999876432 122 34677 788999988777665 555 46776553
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=94.50 E-value=0.11 Score=47.57 Aligned_cols=95 Identities=11% Similarity=0.037 Sum_probs=62.6
Q ss_pred CchHHHHHHHhcCCCCCCCC--cEEEEEecCCCCC---CCCCCCceeeEeeccCC---hHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGP--WKVYGTARRPPPS---WFPSSHVDHYITFDALD---STDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d---~~~l~~~l~~~~~~v~~V~h~A 72 (360)
.+|+.++..|+. .| .+|+.+|+.+... .+.+. .. .+++.. ..+.+++++++ |.||++|
T Consensus 11 ~VG~~la~~L~~------~~~~~ev~L~Di~~~~~~a~dL~~~-~~---~~~l~~~~~t~d~~~a~~~a----DvVvi~a 76 (314)
T 1mld_A 11 GIGQPLSLLLKN------SPLVSRLTLYDIAHTPGVAADLSHI-ET---RATVKGYLGPEQLPDCLKGC----DVVVIPA 76 (314)
T ss_dssp TTHHHHHHHHHT------CTTCSEEEEEESSSHHHHHHHHTTS-SS---SCEEEEEESGGGHHHHHTTC----SEEEECC
T ss_pred hHHHHHHHHHHh------CCCCcEEEEEeCCccHHHHHHHhcc-Cc---CceEEEecCCCCHHHHhCCC----CEEEECC
Confidence 479999999997 67 7899999875210 00010 00 012221 23567788885 7899998
Q ss_pred eecC---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEe
Q 037566 73 FQRL---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLL 113 (360)
Q Consensus 73 ~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~ 113 (360)
+... .+..+....|+..++.+++++.+. ++.. +|+++
T Consensus 77 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~---~p~a-~viv~ 116 (314)
T 1mld_A 77 GVPRKPGMTRDDLFNTNATIVATLTAACAQH---CPDA-MICII 116 (314)
T ss_dssp SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH---CTTS-EEEEC
T ss_pred CcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh---CCCe-EEEEE
Confidence 7532 245677899999999999999987 4443 45554
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=94.40 E-value=0.042 Score=52.34 Aligned_cols=77 Identities=10% Similarity=0.075 Sum_probs=57.3
Q ss_pred chHHHHHHHhcCCCCCCCC---cEEEEEecCCCCC-----CC---CCCCceeeEeeccCChHHHHHHHccCCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGP---WKVYGTARRPPPS-----WF---PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g---~~V~~l~r~~~~~-----~~---~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h 70 (360)
||+.+++.|++ .| .+|++.+|+.... .+ ...+++ .+.+|++|.+++.+++++.+ +|.|+|
T Consensus 12 iG~~ia~~L~~------~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~-~~~~D~~d~~~l~~~l~~~~--~DvVin 82 (405)
T 4ina_A 12 VGGVVAHKMAM------NREVFSHITLASRTLSKCQEIAQSIKAKGYGEID-ITTVDADSIEELVALINEVK--PQIVLN 82 (405)
T ss_dssp HHHHHHHHHHT------CTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCE-EEECCTTCHHHHHHHHHHHC--CSEEEE
T ss_pred HHHHHHHHHHh------CCCCceEEEEEECCHHHHHHHHHHhhhhcCCceE-EEEecCCCHHHHHHHHHhhC--CCEEEE
Confidence 79999999998 66 3899999875321 00 013578 89999999999999998854 689999
Q ss_pred eeeecCCChhHhhhhhHHHHHHHHHHHHhh
Q 037566 71 VMFQRLKSEEINISNNSTMFKNVMSVVVDS 100 (360)
Q Consensus 71 ~A~~~~~~~~~~~~vNv~gt~nll~a~~~~ 100 (360)
+|+... ...++++|.++
T Consensus 83 ~ag~~~-------------~~~v~~a~l~~ 99 (405)
T 4ina_A 83 IALPYQ-------------DLTIMEACLRT 99 (405)
T ss_dssp CSCGGG-------------HHHHHHHHHHH
T ss_pred CCCccc-------------ChHHHHHHHHh
Confidence 986311 14678888886
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=94.32 E-value=0.023 Score=51.32 Aligned_cols=62 Identities=13% Similarity=0.093 Sum_probs=48.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-----F-PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-----~-~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
||++++.+|++ .|++|++++|+..... . ...++. ++.+|++|++++.+++++ +|+|+|+|+.
T Consensus 131 iG~aia~~L~~------~G~~V~i~~R~~~~~~~l~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~----~DvlVn~ag~ 198 (287)
T 1lu9_A 131 VGMRSAALLAG------EGAEVVLCGRKLDKAQAAADSVNKRFKVN-VTAAETADDASRAEAVKG----AHFVFTAGAI 198 (287)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHHHHHTCC-CEEEECCSHHHHHHHTTT----CSEEEECCCT
T ss_pred HHHHHHHHHHH------CcCEEEEEECCHHHHHHHHHHHHhcCCcE-EEEecCCCHHHHHHHHHh----CCEEEECCCc
Confidence 68999999999 8999999998743210 0 002467 889999999999998887 5899999974
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=94.30 E-value=0.022 Score=46.14 Aligned_cols=59 Identities=14% Similarity=0.052 Sum_probs=44.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCC----C-CCCCCCceeeEeeccCChHHHHHH-HccCCCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPP----S-WFPSSHVDHYITFDALDSTDTTQK-LSSISQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~----~-~~~~~~v~~~v~gDl~d~~~l~~~-l~~~~~~v~~V~h~ 71 (360)
+|+++++.|.+ .|++|+++++++.. . .....+++ ++.||.+|++.+.++ ++++ +.|+-+
T Consensus 14 vG~~la~~L~~------~g~~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a----d~vi~~ 78 (153)
T 1id1_A 14 LAINTILQLNQ------RGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGIDRC----RAILAL 78 (153)
T ss_dssp HHHHHHHHHHH------TTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTTTC----SEEEEC
T ss_pred HHHHHHHHHHH------CCCCEEEEECCChHHHHHHHHhhcCCCe-EEEcCCCCHHHHHHcChhhC----CEEEEe
Confidence 69999999998 89999999997421 0 00124688 999999999988876 6664 666544
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=93.83 E-value=0.026 Score=54.76 Aligned_cols=89 Identities=10% Similarity=0.121 Sum_probs=60.4
Q ss_pred CchHHHHHHHhcCCCCCCC-CcEEEEEecCCCCC--CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC
Q 037566 1 MAGLSLAEALKNNPTIPGG-PWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~ 77 (360)
.+|+.+++.|++ . |++|++++|++... .....+++ .+.+|+.|.+++.+++++ +|.|++++.....
T Consensus 33 giG~aia~~L~~------~~g~~V~v~~R~~~ka~~la~~~~~~-~~~~D~~d~~~l~~~l~~----~DvVIn~tp~~~~ 101 (467)
T 2axq_A 33 FVAQPVIDTLAA------NDDINVTVACRTLANAQALAKPSGSK-AISLDVTDDSALDKVLAD----NDVVISLIPYTFH 101 (467)
T ss_dssp TTHHHHHHHHHT------STTEEEEEEESSHHHHHHHHGGGTCE-EEECCTTCHHHHHHHHHT----SSEEEECSCGGGH
T ss_pred HHHHHHHHHHHh------CCCCeEEEEECCHHHHHHHHHhcCCc-EEEEecCCHHHHHHHHcC----CCEEEECCchhhh
Confidence 379999999998 5 78999999975321 00113567 788999999999999887 5799999874321
Q ss_pred C--hh-------HhhhhhH--HHHHHHHHHHHhh
Q 037566 78 S--EE-------INISNNS--TMFKNVMSVVVDS 100 (360)
Q Consensus 78 ~--~~-------~~~~vNv--~gt~nll~a~~~~ 100 (360)
. .. .++.+|. ..+.+++++|+++
T Consensus 102 ~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~a 135 (467)
T 2axq_A 102 PNVVKSAIRTKTDVVTSSYISPALRELEPEIVKA 135 (467)
T ss_dssp HHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHc
Confidence 0 00 1122222 3467888888876
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=93.53 E-value=0.017 Score=53.56 Aligned_cols=88 Identities=13% Similarity=0.047 Sum_probs=56.6
Q ss_pred CchHHHHHHHhcCCCCCCCCc--E-----EEEEecCCCC--C-----CCCCCCceeeEeeccCChHHHHHHHccCCCCcc
Q 037566 1 MAGLSLAEALKNNPTIPGGPW--K-----VYGTARRPPP--S-----WFPSSHVDHYITFDALDSTDTTQKLSSISQEVT 66 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~--~-----V~~l~r~~~~--~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~ 66 (360)
.||++|+..|+. .|. + ++.+|+.+.. . .+.+.... +. .++...+...++++++ |
T Consensus 14 ~VG~~la~~L~~------~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~-~~-~~~~~~~~~~~~~~da----D 81 (333)
T 5mdh_A 14 QIAYSLLYSIGN------GSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LL-KDVIATDKEEIAFKDL----D 81 (333)
T ss_dssp HHHHTTHHHHHT------TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TE-EEEEEESCHHHHTTTC----S
T ss_pred HHHHHHHHHHHh------CCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhc-cc-CCEEEcCCcHHHhCCC----C
Confidence 379999999987 443 3 8888875310 0 00011111 11 1232233456678885 7
Q ss_pred EEEEeeeecC---CChhHhhhhhHHHHHHHHHHHHhh
Q 037566 67 HLFWVMFQRL---KSEEINISNNSTMFKNVMSVVVDS 100 (360)
Q Consensus 67 ~V~h~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~ 100 (360)
.|+|+|+... .+..+.++.|+..++++++++.+.
T Consensus 82 vVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~ 118 (333)
T 5mdh_A 82 VAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY 118 (333)
T ss_dssp EEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999988532 256678899999999999999998
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=92.96 E-value=0.058 Score=44.94 Aligned_cols=59 Identities=17% Similarity=0.074 Sum_probs=43.2
Q ss_pred chHHHHHHHhcCCCCCCC-CcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHH--HccCCCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGG-PWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQK--LSSISQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~--l~~~~~~v~~V~h~ 71 (360)
+|..+++.|.+ . |++|+++++++... .....+++ .+.+|.+|++.+.++ +++ .|.|+-+
T Consensus 50 ~G~~~a~~L~~------~~g~~V~vid~~~~~~~~~~~~g~~-~~~gd~~~~~~l~~~~~~~~----ad~vi~~ 112 (183)
T 3c85_A 50 IGTGAYDELRA------RYGKISLGIEIREEAAQQHRSEGRN-VISGDATDPDFWERILDTGH----VKLVLLA 112 (183)
T ss_dssp HHHHHHHHHHH------HHCSCEEEEESCHHHHHHHHHTTCC-EEECCTTCHHHHHTBCSCCC----CCEEEEC
T ss_pred HHHHHHHHHHh------ccCCeEEEEECCHHHHHHHHHCCCC-EEEcCCCCHHHHHhccCCCC----CCEEEEe
Confidence 69999999998 8 99999999875431 01123577 889999998877665 444 4677654
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=92.83 E-value=0.2 Score=43.73 Aligned_cols=64 Identities=13% Similarity=0.151 Sum_probs=41.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHc-cCCCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLS-SISQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~-~~~~~v~~V~h~A~~~ 75 (360)
+|.+|+++|++ +|++|+.+.|+.........++. .+ |+...+++.+++. .+. .+|.++|+|++.
T Consensus 31 mG~aiA~~~~~------~Ga~V~lv~~~~~~~~~~~~~~~-~~--~v~s~~em~~~v~~~~~-~~Dili~aAAvs 95 (232)
T 2gk4_A 31 LGKIITETLLS------AGYEVCLITTKRALKPEPHPNLS-IR--EITNTKDLLIEMQERVQ-DYQVLIHSMAVS 95 (232)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECTTSCCCCCCTTEE-EE--ECCSHHHHHHHHHHHGG-GCSEEEECSBCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCccccccCCCCeE-EE--EHhHHHHHHHHHHHhcC-CCCEEEEcCccc
Confidence 69999999999 99999999987532111123455 44 5556554433332 222 168999999864
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=91.85 E-value=0.21 Score=39.61 Aligned_cols=57 Identities=14% Similarity=0.024 Sum_probs=42.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHH-HccCCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQK-LSSISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~-l~~~~~~v~~V~ 69 (360)
+|+.+++.|.+ .|++|+++++++... .....++. .+.||.++++.+.++ +++ .|.|+
T Consensus 18 ~G~~la~~L~~------~g~~v~vid~~~~~~~~~~~~g~~-~i~gd~~~~~~l~~a~i~~----ad~vi 76 (140)
T 3fwz_A 18 VGSLLGEKLLA------SDIPLVVIETSRTRVDELRERGVR-AVLGNAANEEIMQLAHLEC----AKWLI 76 (140)
T ss_dssp HHHHHHHHHHH------TTCCEEEEESCHHHHHHHHHTTCE-EEESCTTSHHHHHHTTGGG----CSEEE
T ss_pred HHHHHHHHHHH------CCCCEEEEECCHHHHHHHHHcCCC-EEECCCCCHHHHHhcCccc----CCEEE
Confidence 68999999998 899999999976431 01124678 899999999888765 444 35654
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=91.71 E-value=0.12 Score=44.81 Aligned_cols=57 Identities=9% Similarity=0.050 Sum_probs=43.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHH-HccCCCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQK-LSSISQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~-l~~~~~~v~~V~h~ 71 (360)
+|+.+++.|.+ .|+ |+++++++... ... .+++ ++.||.+|++.+.++ ++++ +.|+-+
T Consensus 20 ~G~~la~~L~~------~g~-v~vid~~~~~~~~~~-~~~~-~i~gd~~~~~~l~~a~i~~a----d~vi~~ 78 (234)
T 2aef_A 20 STLECLRELRG------SEV-FVLAEDENVRKKVLR-SGAN-FVHGDPTRVSDLEKANVRGA----RAVIVD 78 (234)
T ss_dssp HHHHHHHHSTT------SEE-EEEESCGGGHHHHHH-TTCE-EEESCTTCHHHHHHTTCTTC----SEEEEC
T ss_pred HHHHHHHHHHh------CCe-EEEEECCHHHHHHHh-cCCe-EEEcCCCCHHHHHhcCcchh----cEEEEc
Confidence 68999999998 899 99999876431 111 4688 999999999988876 6664 666543
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=91.21 E-value=0.18 Score=47.11 Aligned_cols=74 Identities=12% Similarity=0.074 Sum_probs=53.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCChhH
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSEEI 81 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~~~ 81 (360)
+|+.+++.|.+ .++|.+.+|.........+.+. .+..|+.|.+++.++++++ |.|++++...
T Consensus 27 vG~~~~~~L~~-------~~~v~~~~~~~~~~~~~~~~~~-~~~~d~~d~~~l~~~~~~~----DvVi~~~p~~------ 88 (365)
T 3abi_A 27 IGRAIAWDLKD-------EFDVYIGDVNNENLEKVKEFAT-PLKVDASNFDKLVEVMKEF----ELVIGALPGF------ 88 (365)
T ss_dssp HHHHHHHHHTT-------TSEEEEEESCHHHHHHHTTTSE-EEECCTTCHHHHHHHHTTC----SEEEECCCGG------
T ss_pred HHHHHHHHHhc-------CCCeEEEEcCHHHHHHHhccCC-cEEEecCCHHHHHHHHhCC----CEEEEecCCc------
Confidence 78999988864 5899988886432111124567 7899999999999999985 6888876321
Q ss_pred hhhhhHHHHHHHHHHHHhh
Q 037566 82 NISNNSTMFKNVMSVVVDS 100 (360)
Q Consensus 82 ~~~vNv~gt~nll~a~~~~ 100 (360)
+ | ..++++|.++
T Consensus 89 -~--~----~~v~~~~~~~ 100 (365)
T 3abi_A 89 -L--G----FKSIKAAIKS 100 (365)
T ss_dssp -G--H----HHHHHHHHHH
T ss_pred -c--c----chHHHHHHhc
Confidence 1 1 3678899887
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=90.79 E-value=0.22 Score=40.55 Aligned_cols=65 Identities=12% Similarity=0.043 Sum_probs=44.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-C---------CCCCceeeEeeccCCh--HHHHHHHccCC---CCcc
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-F---------PSSHVDHYITFDALDS--TDTTQKLSSIS---QEVT 66 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~---------~~~~v~~~v~gDl~d~--~~l~~~l~~~~---~~v~ 66 (360)
++...+++|.+ .|.+|++..|...... . ....+. .+.+|++++ +++.++++.+. .+ |
T Consensus 28 p~~a~a~~La~------~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~-~i~~Dv~~~~~~~v~~~~~~i~~~~G~-d 99 (157)
T 3gxh_A 28 PNEQQFSLLKQ------AGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYV-YIPVDWQNPKVEDVEAFFAAMDQHKGK-D 99 (157)
T ss_dssp CCHHHHHHHHH------TTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEE-ECCCCTTSCCHHHHHHHHHHHHHTTTS-C
T ss_pred CCHHHHHHHHH------cCCCEEEECCCcccccccccHHHHHHHcCCeEE-EecCCCCCCCHHHHHHHHHHHHhcCCC-C
Confidence 57788999998 8999888777543210 0 122345 678999999 88877664321 12 8
Q ss_pred EEEEeeee
Q 037566 67 HLFWVMFQ 74 (360)
Q Consensus 67 ~V~h~A~~ 74 (360)
+++|||+.
T Consensus 100 VLVnnAgg 107 (157)
T 3gxh_A 100 VLVHCLAN 107 (157)
T ss_dssp EEEECSBS
T ss_pred EEEECCCC
Confidence 99999975
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=90.63 E-value=0.42 Score=41.45 Aligned_cols=62 Identities=11% Similarity=0.094 Sum_probs=42.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHH-ccCCCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKL-SSISQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l-~~~~~~v~~V~h~A~~~ 75 (360)
+|.+++++|++ +|++|+.++++.... ...+++ ..|+.+.+++.+++ +... .+|.++|+|++.
T Consensus 36 iG~aiA~~~~~------~Ga~V~l~~~~~~l~--~~~g~~---~~dv~~~~~~~~~v~~~~~-~~Dili~~Aav~ 98 (226)
T 1u7z_A 36 MGFAIAAAAAR------RGANVTLVSGPVSLP--TPPFVK---RVDVMTALEMEAAVNASVQ-QQNIFIGCAAVA 98 (226)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECSCCCC--CCTTEE---EEECCSHHHHHHHHHHHGG-GCSEEEECCBCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCcccc--cCCCCe---EEccCcHHHHHHHHHHhcC-CCCEEEECCccc
Confidence 69999999999 999999988765211 122333 46888877654443 2222 268999999853
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=87.98 E-value=0.13 Score=44.07 Aligned_cols=57 Identities=11% Similarity=-0.023 Sum_probs=43.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeeccCChHHHHHH-HccCCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--FPSSHVDHYITFDALDSTDTTQK-LSSISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--~~~~~v~~~v~gDl~d~~~l~~~-l~~~~~~v~~V~ 69 (360)
+|+++++.|.+ .|++|+++++++.... ....++. ++.||.+|++.+.++ +++ .|.|+
T Consensus 11 ~G~~la~~L~~------~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~~~~l~~a~i~~----ad~vi 70 (218)
T 3l4b_C 11 TAYYLARSMLS------RKYGVVIINKDRELCEEFAKKLKAT-IIHGDGSHKEILRDAEVSK----NDVVV 70 (218)
T ss_dssp HHHHHHHHHHH------TTCCEEEEESCHHHHHHHHHHSSSE-EEESCTTSHHHHHHHTCCT----TCEEE
T ss_pred HHHHHHHHHHh------CCCeEEEEECCHHHHHHHHHHcCCe-EEEcCCCCHHHHHhcCccc----CCEEE
Confidence 69999999998 8999999998764210 0123678 899999999988876 555 46664
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=87.32 E-value=0.3 Score=45.27 Aligned_cols=91 Identities=10% Similarity=0.028 Sum_probs=57.9
Q ss_pred chHHHHHHHhcCCCCCCCC--cEEEEEecCCCCC----------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGP--WKVYGTARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g--~~V~~l~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~ 69 (360)
||++++-.|+. .| .+|+.+|...... .+...++. + ..+..++++++ |.||
T Consensus 20 VG~~~a~~l~~------~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-~-------t~d~~~al~dA----DvVv 81 (343)
T 3fi9_A 20 IGSNMAQTAAM------MRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-F-------TSDIKEALTDA----KYIV 81 (343)
T ss_dssp HHHHHHHHHHH------TTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-E-------ESCHHHHHTTE----EEEE
T ss_pred HHHHHHHHHHh------cCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-E-------cCCHHHHhCCC----CEEE
Confidence 78999988887 66 4799998753210 00011122 1 12455678885 7888
Q ss_pred EeeeecC---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEe
Q 037566 70 WVMFQRL---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLL 113 (360)
Q Consensus 70 h~A~~~~---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~ 113 (360)
.+|+... .+..+.+..|+...+.+.+++.+. ++...+++.+
T Consensus 82 itaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvv 125 (343)
T 3fi9_A 82 SSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY---CPDCKHVIII 125 (343)
T ss_dssp ECCC-------CHHHHHHHHHHHHHHHHHHHHHH---CTTCCEEEEC
T ss_pred EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEe
Confidence 8988532 245677899999999999999987 4443334443
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=84.93 E-value=0.78 Score=43.59 Aligned_cols=57 Identities=12% Similarity=-0.048 Sum_probs=42.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHH-HccCCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQK-LSSISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~-l~~~~~~v~~V~ 69 (360)
+|+.|++.|.+ .|++|+++++++... .....++. .+.||.++++.|.++ +++ .+.|+
T Consensus 15 ~G~~va~~L~~------~g~~vvvId~d~~~v~~~~~~g~~-vi~GDat~~~~L~~agi~~----A~~vi 73 (413)
T 3l9w_A 15 FGQITGRLLLS------SGVKMVVLDHDPDHIETLRKFGMK-VFYGDATRMDLLESAGAAK----AEVLI 73 (413)
T ss_dssp HHHHHHHHHHH------TTCCEEEEECCHHHHHHHHHTTCC-CEESCTTCHHHHHHTTTTT----CSEEE
T ss_pred HHHHHHHHHHH------CCCCEEEEECCHHHHHHHHhCCCe-EEEcCCCCHHHHHhcCCCc----cCEEE
Confidence 58999999998 899999999876431 01124677 899999999988876 444 35553
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=81.97 E-value=1 Score=41.19 Aligned_cols=56 Identities=9% Similarity=0.063 Sum_probs=42.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHH-HccCCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQK-LSSISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~-l~~~~~~v~~V~ 69 (360)
+|+++++.|.+ +|+ |+++++++........++. ++.||.+|++.++++ +++ .+.|+
T Consensus 126 ~g~~l~~~L~~------~g~-v~vid~~~~~~~~~~~~~~-~i~gd~~~~~~L~~a~i~~----a~~vi 182 (336)
T 1lnq_A 126 STLECLRELRG------SEV-FVLAEDENVRKKVLRSGAN-FVHGDPTRVSDLEKANVRG----ARAVI 182 (336)
T ss_dssp HHHHHHTTGGG------SCE-EEEESCGGGHHHHHHTTCE-EEESCTTSHHHHHHTCSTT----EEEEE
T ss_pred HHHHHHHHHHh------CCc-EEEEeCChhhhhHHhCCcE-EEEeCCCCHHHHHhcChhh----ccEEE
Confidence 58999999998 899 9999887643111235688 999999999998876 555 35654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.96 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.96 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.95 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.93 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.84 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.84 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.83 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.82 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.81 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.73 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.64 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.16 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.15 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.11 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.08 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.07 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.07 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.07 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.06 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.06 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.05 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.05 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.02 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.02 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.99 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.98 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.96 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.96 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.95 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.95 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.94 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.93 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.92 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.92 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.91 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.88 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.87 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.86 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.84 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.84 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.83 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.83 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.82 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.82 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.82 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.81 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.8 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.79 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.78 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.74 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.74 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.71 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.71 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.67 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.66 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.64 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.63 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.59 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.55 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.54 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.43 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.42 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.38 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.38 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.26 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 98.2 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.17 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.15 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.15 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.01 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.97 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.93 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 97.63 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.56 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 97.2 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 96.77 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 96.4 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 93.28 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 90.96 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 90.64 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 85.64 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.1e-42 Score=325.63 Aligned_cols=310 Identities=14% Similarity=0.063 Sum_probs=213.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V 68 (360)
|||+||+++|++ .|++|++++|.++.. ....++++ ++++||+|.+++.+++++++ +|+|
T Consensus 12 fiGs~lv~~Ll~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d~v 82 (357)
T d1db3a_ 12 QDGSYLAEFLLE------KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFH-LHYGDLSDTSNLTRILREVQ--PDEV 82 (357)
T ss_dssp HHHHHHHHHHHH------TTCEEEEECC---------------------CCEE-ECCCCSSCHHHHHHHHHHHC--CSEE
T ss_pred HHHHHHHHHHHH------CcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeE-EEEeecCCHHHHHHHHhccC--CCEE
Confidence 689999999999 899999999965320 11246899 99999999999999999986 7999
Q ss_pred EEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 69 FWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 69 ~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+|+|+... .++..++++|+.||.|||++|++. +..+++||||+||++|||.+ ...|++|++
T Consensus 83 ~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~--~~~~~~r~i~~SS~~vYG~~------------~~~~~~E~~ 148 (357)
T d1db3a_ 83 YNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL--GLEKKTRFYQASTSELYGLV------------QEIPQKETT 148 (357)
T ss_dssp EECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT--TCTTTCEEEEEEEGGGGTTC------------CSSSBCTTS
T ss_pred EEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCCCcEEEEEEchhhhCCC------------CCCCcCCCC
Confidence 99998532 367789999999999999999876 12345689999999999863 356899999
Q ss_pred CCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 144 LRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
|.. |.+.|+.+|+.+| +..+++++++||++||||+.+..............+. ..+......|++. .
T Consensus 149 ~~~--P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~-~~~~~~~~~g~~~---~ 222 (357)
T d1db3a_ 149 PFY--PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIA-QGLESCLYLGNMD---S 222 (357)
T ss_dssp CCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHH-TTSCCCEEESCTT---C
T ss_pred CCC--CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHH-hCCCceEEECCCC---e
Confidence 875 5778999999888 3458999999999999997643221111111111121 2234445568776 6
Q ss_pred cccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHH
Q 037566 217 FCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVE 296 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (360)
.+|++|++|+|+++++++.. ..+++|||++|+.+|++|+++.+++.+|....... .+........... +..
T Consensus 223 ~r~~~~v~D~~~a~~~~~~~--~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~~--- 293 (357)
T d1db3a_ 223 LRDWGHAKDYVKMQWMMLQQ--EQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEG--TGVEEKGIVVSVT--GHD--- 293 (357)
T ss_dssp EECCEEHHHHHHHHHHTTSS--SSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEES--CGGGCEEEEEEEC--SSS---
T ss_pred eecceeechHHHHHHHHHhC--CCCCeEEECCCCceehHHHHHHHHHHhCCcccccc--ccccccchhhhhh--ccc---
Confidence 78999999999999988764 35789999999999999999999999996543100 0000000000000 000
Q ss_pred HhCCCccCcccccccchhhhhhc---cccccccchhHHHH-cCCCcccccHHHHHHHHHHH
Q 037566 297 KHGLYKTKMEEITCFEALNTVLH---LQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKL 353 (360)
Q Consensus 297 ~~~l~~~~~~~~~~~~~~d~~~~---~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~ 353 (360)
.....+... ...++.... ......+|++||++ |||+|+++++|+|+++++++
T Consensus 294 ~~~~~~~~~-----~~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~ 349 (357)
T d1db3a_ 294 APGVKPGDV-----IIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAND 349 (357)
T ss_dssp CTTCCTTCE-----EEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred ccccccCce-----eEeeccccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 000000000 000010000 01134679999987 79999999999999998643
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-39 Score=302.34 Aligned_cols=279 Identities=12% Similarity=0.082 Sum_probs=203.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL--- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~--- 76 (360)
|||++|+++|++ +|++|++++|...... ....... +..+|+.|.+.+..++.+ +|+|||+|+...
T Consensus 12 fiG~~lv~~L~~------~g~~V~~~d~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~----~d~VihlAa~~~~~~ 80 (312)
T d2b69a1 12 FVGSHLTDKLMM------DGHEVTVVDNFFTGRKRNVEHWIG-HENFELINHDVVEPLYIE----VDQIYHLASPASPPN 80 (312)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCSSCCGGGTGGGTT-CTTEEEEECCTTSCCCCC----CSEEEECCSCCSHHH
T ss_pred HHHHHHHHHHHH------CcCEEEEEeCCCcCCHHHHHHhcC-CCceEEEehHHHHHHHcC----CCEEEECcccCCchh
Confidence 589999999999 8999999997533210 0112233 444555555444444444 689999998532
Q ss_pred --CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC--C-CCCC
Q 037566 77 --KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL--P-FPNF 151 (360)
Q Consensus 77 --~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~--p-~p~~ 151 (360)
.++.+.+++|+.||.|||++|++. ++ ||||+||++|||.+ ...|.+|+.... | .|.+
T Consensus 81 ~~~~~~~~~~~Nv~g~~~ll~~~~~~-----~~-k~I~~SS~~vy~~~------------~~~~~~e~~~~~~~~~~p~~ 142 (312)
T d2b69a1 81 YMYNPIKTLKTNTIGTLNMLGLAKRV-----GA-RLLLASTSEVYGDP------------EVHPQSEDYWGHVNPIGPRA 142 (312)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHH-----TC-EEEEEEEGGGGBSC------------SSSSBCTTCCCBCCSSSTTH
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHc-----CC-cEEEEEChheecCC------------CCCCCCccccCCCCCCCCcc
Confidence 367788999999999999999987 55 79999999999964 234555554211 1 3578
Q ss_pred cHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHH
Q 037566 152 YYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSR 224 (360)
Q Consensus 152 ~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~ 224 (360)
.|+.+|.++| +.++++++++||++||||++......+.+..+..+ ..|.++.++|++. ..+|++|++
T Consensus 143 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~---~~g~~i~i~~~g~---~~r~~i~v~ 216 (312)
T d2b69a1 143 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQA---LQGEPLTVYGSGS---QTRAFQYVS 216 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHH---HHTCCEEEESSSC---CEEECEEHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHH---HcCCCeEEeCCCC---eeEccEEHH
Confidence 8999998888 34689999999999999987532222333222222 2477888888886 668999999
Q ss_pred HHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccC
Q 037566 225 VLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTK 304 (360)
Q Consensus 225 dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 304 (360)
|+|++++.++.. ..+++||+++|+.+|+.|+.+.+++.+|.+...- -.+ ..+.
T Consensus 217 D~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~----------------------~~~~- 269 (312)
T d2b69a1 217 DLVNGLVALMNS--NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ--FLS----------------------EAQD- 269 (312)
T ss_dssp HHHHHHHHHHTS--SCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEE--EEC----------------------CCTT-
T ss_pred HHHHHHHHHHhh--ccCCceEecCCcccchhhHHHHHHHHhCCCCceE--ECC----------------------CCCC-
Confidence 999999887753 3567899999999999999999999999754310 000 0000
Q ss_pred cccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 305 MEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 305 ~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
. ......|++|+++ +||+|.++++|||+++++||+++
T Consensus 270 --~-------------~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~ 307 (312)
T d2b69a1 270 --D-------------PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 307 (312)
T ss_dssp --C-------------CCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred --C-------------CCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Confidence 0 1235779999976 79999999999999999999764
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=1.5e-38 Score=296.59 Aligned_cols=278 Identities=13% Similarity=0.127 Sum_probs=215.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcE------EEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccCCCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWK------VYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~------V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~ 67 (360)
|||++|+++|++ +|++ |+++++..... .....+++ ++.+|+.+...+...... +|.
T Consensus 11 fIG~~l~~~L~~------~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~----~d~ 79 (322)
T d1r6da_ 11 FIGSHFVRQLLA------GAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLR-FVHGDIRDAGLLARELRG----VDA 79 (322)
T ss_dssp HHHHHHHHHHHH------TSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEE-EEECCTTCHHHHHHHTTT----CCE
T ss_pred HHHHHHHHHHHH------CCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeE-EEEeccccchhhhccccc----cce
Confidence 589999999999 7764 55555432211 11346789 999999999888777665 588
Q ss_pred EEEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 68 LFWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 68 V~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+|+|+... .+..+.+++|+.||.||+++|.+. ++++|||+||+++||.. ...|++|+
T Consensus 80 vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-----~~~~~I~~Ss~~~yg~~------------~~~~~~E~ 142 (322)
T d1r6da_ 80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVSTNQVYGSI------------DSGSWTES 142 (322)
T ss_dssp EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCCC------------SSSCBCTT
T ss_pred EEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-----CCceEEEeecceeecCC------------CCCCCCCC
Confidence 999997532 256678899999999999999987 78999999999999963 35678999
Q ss_pred CCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 143 SLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
+|.. |.+.|+.+|..+| +.++++++++||++||||++.. +.+.+..+..+ ..+.++.+.|++.
T Consensus 143 ~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~--~~~i~~~i~~~---~~~~~i~v~~~g~--- 212 (322)
T d1r6da_ 143 SPLE--PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--EKLIPLFVTNL---LDGGTLPLYGDGA--- 212 (322)
T ss_dssp SCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--TSHHHHHHHHH---HTTCCEEEETTSC---
T ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCc--CcHHHHHHHHH---HcCCCcEEecCCC---
Confidence 9876 5778999998887 3468999999999999998642 12222222211 2467888888887
Q ss_pred ccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHH
Q 037566 216 HFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIV 295 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (360)
+.+|++|++|+|++++.++.++ ..|++|||++++++|+.|+++.+++.+|.+.+...
T Consensus 213 ~~r~~i~v~D~a~ai~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~---------------------- 269 (322)
T d1r6da_ 213 NVREWVHTDDHCRGIALVLAGG-RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVR---------------------- 269 (322)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEE----------------------
T ss_pred eEEccEEHHHHHHHHHHHHhCC-CCCCeeEEeecccchhHHHHHHHHHHhCCCcccee----------------------
Confidence 6789999999999999998764 45899999999999999999999999997654210
Q ss_pred HHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 296 EKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.....+.. .....+|++|+++ |||+|+++++|||+++++||+++
T Consensus 270 ---~~~~~~~~--------------~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n 314 (322)
T d1r6da_ 270 ---KVADRKGH--------------DLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314 (322)
T ss_dssp ---EECCCTTC--------------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred ---ecCCCCCC--------------CceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 00000100 1246789999986 79999999999999999999975
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.9e-38 Score=297.89 Aligned_cols=287 Identities=11% Similarity=0.038 Sum_probs=213.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
|||++|+++|++ +|++|++++|-.... .....+++ ++++||+|.+.+.++++..+ +|+|||+|
T Consensus 11 fIG~~l~~~L~~------~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~~~--~d~ViHlA 81 (338)
T d1udca_ 11 YIGSHTCVQLLQ------NGHDVIILDNLCNSKRSVLPVIERLGGKHPT-FVEGDIRNEALMTEILHDHA--IDTVIHFA 81 (338)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCSSCCTTHHHHHHHHHTSCCE-EEECCTTCHHHHHHHHHHTT--CSEEEECC
T ss_pred HHHHHHHHHHHH------CcCEEEEEECCCCcchhhHHHHHhhcCCCCE-EEEeecCCHHHHHHHHhccC--CCEEEECC
Confidence 589999999999 899999998743221 01235799 99999999999999999654 79999999
Q ss_pred eecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 73 FQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 73 ~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
+... .++.+++++|+.||+|+|++|++. ++++||++||.+||+.. ...+..|..+..
T Consensus 82 a~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-----~v~~~i~~Ss~~vy~~~------------~~~~~~e~~~~~- 143 (338)
T d1udca_ 82 GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSATVYGDQ------------PKIPYVESFPTG- 143 (338)
T ss_dssp SCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSC------------CSSSBCTTSCCC-
T ss_pred CccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-----CCCEEEecCcceEEccc------------cccccccccccC-
Confidence 8533 266788999999999999999997 79999999999999853 233445555432
Q ss_pred CCCCcHHHHHHHHh--------cCCCCcEEEEcCCCeeecCCCC--------cchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 148 FPNFYYAVEDIAAS--------YSPAVTYSVHRSSIIIGASSRS--------LNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e--------~~~~~~~~ilRp~~vyGp~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
.|...|+.+|..+| ...+++++++||++||||++.. ..+...+..+.. ....+.++.+.|+.
T Consensus 144 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~i~i~g~~ 221 (338)
T d1udca_ 144 TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQV--AVGRRDSLAIFGND 221 (338)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHH--HTTSSSCEEEECSC
T ss_pred CCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHH--HhcCCCCEEEeCCC
Confidence 46778998888776 3468999999999999997531 112222221211 11234566666763
Q ss_pred c---cccccccccCHHHHHHHHHHHHc--CCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHH
Q 037566 212 Y---TWEHFCDMSDSRVLAEQQIWAAT--TDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKE 286 (360)
Q Consensus 212 ~---~~~~~~d~~~v~dla~a~~~a~~--~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~ 286 (360)
. .+.+.+|++|++|+++++..+.. .....+++|||++++++|+.|+++.+++.+|.+.+.- -.+.
T Consensus 222 ~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~--~~~~-------- 291 (338)
T d1udca_ 222 YPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYH--FAPR-------- 291 (338)
T ss_dssp SSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEE--EECC--------
T ss_pred cccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceE--ECCC--------
Confidence 2 23478999999999988776554 3334478999999999999999999999999654420 0000
Q ss_pred hhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 287 KGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 287 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.+.. ...+.+|++|+|+ |||+|.++++|||++|++||+++
T Consensus 292 --------------~~~~----------------~~~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~~~ 332 (338)
T d1udca_ 292 --------------REGD----------------LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_dssp --------------CTTC----------------CSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred --------------CCCC----------------CCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhc
Confidence 0000 1245789999987 79999999999999999999987
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.4e-38 Score=301.63 Aligned_cols=301 Identities=11% Similarity=0.061 Sum_probs=214.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcE-EEEEecCCCC-------CCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWK-VYGTARRPPP-------SWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~-V~~l~r~~~~-------~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
|||+||+++|++ .|++ |+++++.... ......+++ ++++||+|+..+.+++++.+ +|+|||+|
T Consensus 11 fIGs~l~~~L~~------~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~~~--~d~VihlA 81 (361)
T d1kewa_ 11 FIGSAVVRHIIK------NTQDTVVNIDKLTYAGNLESLSDISESNRYN-FEHADICDSAEITRIFEQYQ--PDAVMHLA 81 (361)
T ss_dssp HHHHHHHHHHHH------HCSCEEEEEECCCTTCCGGGGTTTTTCTTEE-EEECCTTCHHHHHHHHHHHC--CSEEEECC
T ss_pred HHHHHHHHHHHH------CCCCEEEEEeCCCccccHHHHHhhhhcCCcE-EEEccCCCHHHHHHHHHhCC--CCEEEECc
Confidence 689999999999 8987 5556654322 122456899 99999999999999998875 79999999
Q ss_pred eecC-----CChhHhhhhhHHHHHHHHHHHHhhcc----CCCCccEEEEeccCccccccccCCcccCCcCCCCCC-CCCC
Q 037566 73 FQRL-----KSEEINISNNSTMFKNVMSVVVDSNK----GRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP-FKED 142 (360)
Q Consensus 73 ~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~----~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p-~~E~ 142 (360)
+... .++..++++|+.||.|++++|++..- ...++++|||+||+.|||...... ..+. ....| ..|+
T Consensus 82 a~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~--~~~~-~~~~~~~~e~ 158 (361)
T d1kewa_ 82 AESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPD--EVEN-SVTLPLFTET 158 (361)
T ss_dssp SCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGG--GSCT-TSCCCCBCTT
T ss_pred cccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCC--cccc-ccCCCCcccC
Confidence 8543 26678899999999999999987400 001356999999999999632100 0000 01122 2355
Q ss_pred CCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 143 SLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
.+.. |.+.|+.+|+++| ...+++++++||++||||++.. +.+.+..+..+ ..|.++.+.|++.
T Consensus 159 ~~~~--p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~--~~~i~~~i~~~---~~g~~~~v~g~g~--- 228 (361)
T d1kewa_ 159 TAYA--PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNA---LEGKPLPIYGKGD--- 228 (361)
T ss_dssp SCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHH---HHTCCEEEETTSC---
T ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc--CcHHHHHHHHH---HcCCCcEEeCCCC---
Confidence 5543 5778999999888 3458999999999999998642 12222222222 2467888889887
Q ss_pred ccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHH
Q 037566 216 HFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIV 295 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (360)
..+|++|++|+|++++.++.++ ..|++|||++|..+|+.|+++.+.+.++...+... ....
T Consensus 229 ~~r~~i~v~D~a~ai~~~~~~~-~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~---~~~~--------------- 289 (361)
T d1kewa_ 229 QIRDWLYVEDHARALHMVVTEG-KAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT---SYRE--------------- 289 (361)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS---CGGG---------------
T ss_pred eEEeCEEHHHHHHHHHHHHhcC-CCCCeEEECCCCCcchHHHHhHhhhhccccccccc---Cccc---------------
Confidence 6689999999999999988764 45899999999999999999999999876543210 0000
Q ss_pred HHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 296 EKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
......... +....+..|++||++ |||+|.++++|||++|++||+++
T Consensus 290 ---~~~~~~~~~-----------~~~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n 337 (361)
T d1kewa_ 290 ---QITYVADRP-----------GHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp ---GEEEECCCT-----------TCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred ---ceeecCCCC-----------CCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 000000000 001245789999986 79999999999999999999875
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=2.7e-38 Score=297.03 Aligned_cols=284 Identities=16% Similarity=0.112 Sum_probs=217.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHL 68 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V 68 (360)
|||++|+++|++ .||+|++++|..... .....+++ ++.+|+.|...+.....+ +++|
T Consensus 27 fIGs~lv~~L~~------~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~d~~~~~~~~~~----~~~v 95 (341)
T d1sb8a_ 27 FIGSNLLETLLK------LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK-FIQGDIRNLDDCNNACAG----VDYV 95 (341)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEE-EEECCTTSHHHHHHHHTT----CSEE
T ss_pred HHHHHHHHHHHH------CcCEEEEEECCCCcchhhHHHHHHhhhhcccCCee-EEeecccccccccccccc----cccc
Confidence 589999999999 999999999754321 01125688 999999999988777666 4788
Q ss_pred EEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 69 FWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 69 ~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+|+|+... .++...+++|+.||.||+++|.++ ++++|||+||++|||.. +..|.+|++
T Consensus 96 ~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-----~~~~~i~~SS~~vyg~~------------~~~~~~E~~ 158 (341)
T d1sb8a_ 96 LHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSSTYGDH------------PGLPKVEDT 158 (341)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTC------------CCSSBCTTC
T ss_pred ccccccccccccccCccchhheeehhHHHHHHHHHhc-----CCceEEEcccceeeCCC------------CCCCccCCC
Confidence 89887432 366778999999999999999987 78999999999999953 356899999
Q ss_pred CCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC--cchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 144 LRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS--LNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
|.. |.+.|+.+|+++| +..+++++++||++||||+... ....+.+..+..+ ..|.++.+.|++.
T Consensus 159 ~~~--p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~---~~g~~i~~~g~g~-- 231 (341)
T d1sb8a_ 159 IGK--PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSM---IQGDDVYINGDGE-- 231 (341)
T ss_dssp CCC--CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHH---HHTCCCEEESSSC--
T ss_pred CCC--CCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHH---HcCCceEEcCCCC--
Confidence 876 4778999999888 3458999999999999997642 2222222222222 2477888888876
Q ss_pred cccccccCHHHHHHHHHHHHcCC-CCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHH
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD-RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDE 293 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~-~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (360)
+.+|++|++|+|+++..++... ...|++||+++++.+|++|+...|++.+|.+..... +.+.
T Consensus 232 -~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~---~~~~------------- 294 (341)
T d1sb8a_ 232 -TSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYH---REPV------------- 294 (341)
T ss_dssp -CEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCC---CCCE-------------
T ss_pred -EEEEEEEEeccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhcccccccc---cccc-------------
Confidence 6789999999999998887654 345889999999999999999999999986543210 0000
Q ss_pred HHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 294 IVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 294 ~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
...... .| ....++|++|+++ |||+|+++++|||++|++||++
T Consensus 295 --------~~~~~~------~~-----~~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~ 338 (341)
T d1sb8a_ 295 --------YRDFRE------GD-----VRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 338 (341)
T ss_dssp --------EECCCT------TC-----CSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred --------ccCCCC------CC-----cCeeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 000000 01 1245789999987 7999999999999999999986
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.8e-38 Score=296.09 Aligned_cols=290 Identities=11% Similarity=0.074 Sum_probs=216.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
|||+||+++|++ +|++|++++|..... .....+++ ++.+||+|.+.+.++++... +|+|||+|
T Consensus 12 fIG~~lv~~Ll~------~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~-~~~~Dl~d~~~l~~~~~~~~--~d~VihlA 82 (347)
T d1z45a2 12 YIGSHTVVELIE------NGYDCVVADNLSNSTYDSVARLEVLTKHHIP-FYEVDLCDRKGLEKVFKEYK--IDSVIHFA 82 (347)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCSSCCTHHHHHHHHHHTSCCC-EEECCTTCHHHHHHHHHHSC--CCEEEECC
T ss_pred HHHHHHHHHHHH------CcCeEEEEECCCCcchhHHHhHHhhcccCCe-EEEeecCCHHHHHHHHhccC--CCEEEEcc
Confidence 689999999999 899999998754321 01246789 99999999999999998765 79999999
Q ss_pred eecCC-----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 73 FQRLK-----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 73 ~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
+.... ++..+..+|+.||.||+++|++. +++|||++||..|||.... .+...+++|+.+..
T Consensus 83 a~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-----~i~~~i~~SS~~vyg~~~~--------~~~~~~~~e~~~~~- 148 (347)
T d1z45a2 83 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYGDATR--------FPNMIPIPEECPLG- 148 (347)
T ss_dssp SCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCCGGG--------STTCCSBCTTSCCC-
T ss_pred ccccccccccCcccccccchhhhHHHHHHHHhc-----ccceEEeecceeeecCccc--------CCCCCccccccCCC-
Confidence 85432 56678899999999999999987 8999999999999996421 01346788888765
Q ss_pred CCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCC--------cchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 148 FPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRS--------LNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
|.+.|+.+|.++| ...+++++++||++|||+.+.. ..+.+.+.. .... ...+.++.+.|+
T Consensus 149 -p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~-~~~~-~~~~~~i~i~g~ 225 (347)
T d1z45a2 149 -PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYM-AQVA-VGRREKLYIFGD 225 (347)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHH-HHHH-TTSSSCCCCC--
T ss_pred -CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHH-HHHH-hcCCCCeEEeCC
Confidence 4778999998887 2468999999999999986532 112222221 1111 123456666677
Q ss_pred cc---cccccccccCHHHHHHHHHHHHcC------CCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHH
Q 037566 211 KY---TWEHFCDMSDSRVLAEQQIWAATT------DRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAV 281 (360)
Q Consensus 211 ~~---~~~~~~d~~~v~dla~a~~~a~~~------~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~ 281 (360)
+. .+.+++|++++.+.+.+++.++.. ....+++|||++|+++|+.|+++.+++.+|.+.+.- .
T Consensus 226 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~-------~- 297 (347)
T d1z45a2 226 DYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK-------V- 297 (347)
T ss_dssp ----CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC----------
T ss_pred CccccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceE-------e-
Confidence 64 357899999999999998887642 223478999999999999999999999999765421 0
Q ss_pred HHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 282 EMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.. + .+.. .....+|++|+++ |||+|.++++|||++|++||+++
T Consensus 298 --~~-----------~---~~~~----------------~~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~n 341 (347)
T d1z45a2 298 --TG-----------R---RAGD----------------VLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTEN 341 (347)
T ss_dssp ---------------------------------------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred --CC-----------C---CCCC----------------CCEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhC
Confidence 00 0 0000 1134789999987 89999999999999999999987
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.2e-37 Score=293.13 Aligned_cols=285 Identities=10% Similarity=0.025 Sum_probs=211.3
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR---- 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~---- 75 (360)
|||++|+++|++ +||+|++++|+..... ......+ +..+|++|.+.+.+++++ +|+|+|+|+..
T Consensus 26 fIGs~lv~~L~~------~g~~V~~~d~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~----~d~Vih~a~~~~~~~ 94 (363)
T d2c5aa1 26 FIASHIARRLKH------EGHYVIASDWKKNEHMTEDMFCDE-FHLVDLRVMENCLKVTEG----VDHVFNLAADMGGMG 94 (363)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSCCSSSCGGGTCSE-EEECCTTSHHHHHHHHTT----CSEEEECCCCCCCHH
T ss_pred HHHHHHHHHHHH------CcCEEEEEeCCCccchhhhcccCc-EEEeechhHHHHHHHhhc----CCeEeeccccccccc
Confidence 689999999999 9999999998755432 1234567 899999999999998887 58999999742
Q ss_pred --CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcH
Q 037566 76 --LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYY 153 (360)
Q Consensus 76 --~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y 153 (360)
...+.....+|+.||.+++++|.+. +++|||++||..+||.... ...........|++|. .|.+.|
T Consensus 95 ~~~~~~~~~~~~n~~gt~~ll~~~~~~-----~vk~~i~~SS~~~~~~~~~-----~~~~~~~~~~~e~~~~--~p~~~Y 162 (363)
T d2c5aa1 95 FIQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFYASSACIYPEFKQ-----LETTNVSLKESDAWPA--EPQDAF 162 (363)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEEEGGGSCGGGS-----SSSSSCEECGGGGSSB--CCSSHH
T ss_pred ccccccccccccccchhhHHHHhHHhh-----Ccccccccccccccccccc-----ccccccccccccCCcC--CCCCHH
Confidence 2356678899999999999999987 8999999999999986421 0000001123344444 357889
Q ss_pred HHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc-c-hhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHH
Q 037566 154 AVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL-N-NSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSR 224 (360)
Q Consensus 154 ~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~ 224 (360)
+.+|+.+| +..+++++++||++||||++... . ...... .. ........+....|++. +.+|++|++
T Consensus 163 g~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~g~g~---~~rd~i~v~ 237 (363)
T d2c5aa1 163 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAA-FC-RKAQTSTDRFEMWGDGL---QTRSFTFID 237 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHH-HH-HHHHHCSSCEEEESCSC---CEECCEEHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccc-cc-cccccccccccccCCCC---eEEEEeehh
Confidence 99999888 34589999999999999976421 1 111111 11 11112455666778876 678999999
Q ss_pred HHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccC
Q 037566 225 VLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTK 304 (360)
Q Consensus 225 dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 304 (360)
|+|+++++++.. ..+++|||++|+.+|+.|+++.+++.+|.+.+.. ..+ .+.
T Consensus 238 D~~~~~~~~~~~--~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~--~~~------------------------~~~ 289 (363)
T d2c5aa1 238 ECVEGVLRLTKS--DFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH--HIP------------------------GPE 289 (363)
T ss_dssp HHHHHHHHHHHS--SCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEE--EEC------------------------CCC
T ss_pred HHHHHHHHHHhC--CCCCeEEEecCCcccHHHHHHHHHHHhCCCCceE--eCC------------------------CCC
Confidence 999999988764 3578999999999999999999999998754311 000 000
Q ss_pred cccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 305 MEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 305 ~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
. .....+|++||++ |||+|.++++|||++|++||+++
T Consensus 290 --~-------------~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~~ 327 (363)
T d2c5aa1 290 --G-------------VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ 327 (363)
T ss_dssp --C-------------CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred --C-------------ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 0 1135679999987 79999999999999999999763
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.1e-36 Score=283.16 Aligned_cols=286 Identities=13% Similarity=0.024 Sum_probs=213.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
|||++|+++|++ +||+|++++|..+... ...++++ ++.+||+|.+.+.+.+.... ++.++|+|+
T Consensus 11 fiG~~l~~~Ll~------~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~~~~~~~a~ 81 (321)
T d1rpna_ 11 QDGAYLAKLLLE------KGYRVHGLVARRSSDTRWRLRELGIEGDIQ-YEDGDMADACSVQRAVIKAQ--PQEVYNLAA 81 (321)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCCSSCCCHHHHHTTCGGGEE-EEECCTTCHHHHHHHHHHHC--CSEEEECCS
T ss_pred HHHHHHHHHHHH------CcCEEEEEECCCCcccHHHHHHhcccCCcE-EEEccccChHHhhhhhcccc--ccccccccc
Confidence 589999999999 8999999999764321 1246789 99999999999999888765 577888876
Q ss_pred ecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 74 QRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 74 ~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
... .++.+++++|+.||.|+|++|++. + ..++|+++||+.+||.. ...+.+|++|..
T Consensus 82 ~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~---~-~~~~~i~~Ss~~~~~~~------------~~~~~~E~~~~~-- 143 (321)
T d1rpna_ 82 QSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF---S-PETRFYQASTSEMFGLI------------QAERQDENTPFY-- 143 (321)
T ss_dssp CCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH---C-TTSEEEEEEEGGGGCSC------------SSSSBCTTSCCC--
T ss_pred cccccccccchHHHHhhhhhchHHHHHHHHHh---C-CCcccccccchhhcCcc------------cCCCCCCCCCcc--
Confidence 422 356788999999999999999987 2 35688899998888753 245678999865
Q ss_pred CCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccccc
Q 037566 149 PNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMS 221 (360)
Q Consensus 149 p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~ 221 (360)
|.+.|+.+|+.+| ...+++++++||++||||..+.....-.....+..+. ..+.+....|++. ..+|++
T Consensus 144 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~-~~~~~~i~~g~g~---~~r~~i 219 (321)
T d1rpna_ 144 PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIK-LGKQQELRLGNVD---AKRDWG 219 (321)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHH-TTSCSCEEESCTT---CEEECE
T ss_pred ccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHH-hCCCCcEEECCCC---eEEccE
Confidence 5788999998888 3468999999999999997532211101111111121 1234555578876 568999
Q ss_pred CHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCC
Q 037566 222 DSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLY 301 (360)
Q Consensus 222 ~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (360)
|++|+|+++++++.++ .++.||+++++..|+.++...+++.+|.+.+.. ...... ...
T Consensus 220 ~v~D~~~~~~~~~~~~--~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~-----------------~~r 277 (321)
T d1rpna_ 220 FAGDYVEAMWLMLQQD--KADDYVVATGVTTTVRDMCQIAFEHVGLDYRDF---LKIDPA-----------------FFR 277 (321)
T ss_dssp EHHHHHHHHHHHHHSS--SCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGT---EEECGG-----------------GCC
T ss_pred EeHHHHHHHHHHHhcC--CcCCceecccccceehhhhHHHHHHhCCCccce---eecCCC-----------------CCC
Confidence 9999999999998765 357899999999999999999999999765421 000000 000
Q ss_pred ccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 302 KTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 302 ~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
+.. ......|++|+++ |||+|+++++|+|++|++|+.+
T Consensus 278 p~~----------------~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~ 316 (321)
T d1rpna_ 278 PAE----------------VDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLR 316 (321)
T ss_dssp SSC----------------CCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred CCc----------------cCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 000 1135779999987 6999999999999999999754
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-36 Score=281.47 Aligned_cols=298 Identities=14% Similarity=0.024 Sum_probs=212.1
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------------CCCCCCceeeEeeccCChHHHHHHHccCCCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~ 67 (360)
|||+||+++|++ +||+|++++|+++.. .....+++ ++.+||+|++.+.+++.+.+ +++
T Consensus 12 fIG~~l~~~Ll~------~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~~~ 82 (347)
T d1t2aa_ 12 QDGSYLAEFLLE------KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK-LHYGDLTDSTCLVKIINEVK--PTE 82 (347)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCCSSCCCTTTGGGC---------CEE-EEECCTTCHHHHHHHHHHHC--CSE
T ss_pred HHHHHHHHHHHH------CcCEEEEEECCCcccchhhHHHHhhchhhhccCCcE-EEEeecCCchhhHHHHhhcc--cce
Confidence 689999999999 999999999975421 01124789 99999999999999998876 688
Q ss_pred EEEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 68 LFWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 68 V~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+|+|+... .++..++++|+.||.||+++|+++ +..+.++|||+||++|||.+ ...|++|+
T Consensus 83 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~~~~~~i~~SS~~vyg~~------------~~~~~~E~ 148 (347)
T d1t2aa_ 83 IYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC--GLINSVKFYQASTSELYGKV------------QEIPQKET 148 (347)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT--TCTTTCEEEEEEEGGGTCSC------------SSSSBCTT
T ss_pred eeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHc--CCCCCcEEEEecchheecCC------------CCCCCCCC
Confidence 999987432 256677899999999999999886 11235689999999999953 35689999
Q ss_pred CCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHH-HHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 143 SLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLL-TLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
+|.. |.+.|+.+|+.+| +..+++++++||++||||+......... ...+... ...+.++...|++.
T Consensus 149 ~~~~--P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~--~~~~~~~~~~g~g~-- 222 (347)
T d1t2aa_ 149 TPFY--PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKI--YLGQLECFSLGNLD-- 222 (347)
T ss_dssp SCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHH--HHTSCSCEEESCTT--
T ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehh--hcCCcceeecCCCc--
Confidence 9875 5778999999888 3468999999999999997543221111 1111111 12345666778876
Q ss_pred cccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHH
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEI 294 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (360)
..+|++|++|+|++++.++... ..+.||++.+...++++....+...+|....... .....+ ...
T Consensus 223 -~~r~~i~v~D~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~------- 287 (347)
T d1t2aa_ 223 -AKRDWGHAKDYVEAMWLMLQND--EPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEG-KNENEV----GRC------- 287 (347)
T ss_dssp -CEECCEEHHHHHHHHHHHHHSS--SCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEES-CGGGCE----EEE-------
T ss_pred -ceeeeeEecHHHHHHHHHhhcC--CCccceeccccccccchhhhhhhhhhcceeeecc-cchhhh----hhh-------
Confidence 6689999999999999988754 2467999999999999999999999998654210 000000 000
Q ss_pred HHHhCCCccCcccccccchhhhhh---ccccccccchhHHHH-cCCCcccccHHHHHHHHHH
Q 037566 295 VEKHGLYKTKMEEITCFEALNTVL---HLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKK 352 (360)
Q Consensus 295 ~~~~~l~~~~~~~~~~~~~~d~~~---~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~ 352 (360)
. ....... .+|... +....+.+|++|||+ |||+|+++++|||+++++|
T Consensus 288 ----~-~~~~~~~-----~~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~ 339 (347)
T d1t2aa_ 288 ----K-ETGKVHV-----TVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHA 339 (347)
T ss_dssp ----T-TTCCEEE-----EECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred ----h-hcCCcee-----eecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 0 0000000 000000 001235779999987 7999999999999999754
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-36 Score=281.26 Aligned_cols=287 Identities=11% Similarity=0.033 Sum_probs=210.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------------CCCCCCceeeEeeccCChHHHHHHHccCCCCcc
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVT 66 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~ 66 (360)
|||+||+++|++ +|++|++++|..... .....+++ ++++|++|.+.+.+++.+.+ ++
T Consensus 13 fIGs~lv~~Ll~------~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~~~--~~ 83 (346)
T d1ek6a_ 13 YIGSHTVLELLE------AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE-FEEMDILDQGALQRLFKKYS--FM 83 (346)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCE-EEECCTTCHHHHHHHHHHCC--EE
T ss_pred HHHHHHHHHHHH------CcCEEEEEECCCccccccccchHHHHHHHHhcCCCcE-EEEeeccccccccccccccc--cc
Confidence 589999999999 899999998632211 01246789 99999999999999999886 78
Q ss_pred EEEEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 67 HLFWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 67 ~V~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
.++|+|+... .++.+.+++|+.||.|++++|.+. ++++|+|+||+.+||... ..+..+
T Consensus 84 ~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-----~v~~~i~~ss~~~~~~~~------------~~~~~~ 146 (346)
T d1ek6a_ 84 AVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-----GVKNLVFSSSATVYGNPQ------------YLPLDE 146 (346)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCSCS------------SSSBCT
T ss_pred cccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-----Ccccccccccceeeeccc------------cccccc
Confidence 9999998533 267788999999999999999987 899999999999998531 111122
Q ss_pred CCCCCCCCCCcHHHHHHHHh--------cCCCCcEEEEcCCCeeecCCCCc--------chhHHHHHHHHHHHhhcCCCe
Q 037566 142 DSLRLPFPNFYYAVEDIAAS--------YSPAVTYSVHRSSIIIGASSRSL--------NNSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e--------~~~~~~~~ilRp~~vyGp~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 205 (360)
+.+. ..|.+.|+.+|+.+| ...+++.+++||+++|||..... .+.+.+..+... ...+.++
T Consensus 147 ~~~~-~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i 223 (346)
T d1ek6a_ 147 AHPT-GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVA--IGRREAL 223 (346)
T ss_dssp TSCC-CCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHH--HTSSSCE
T ss_pred cccc-cccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHH--HcCCCcE
Confidence 2221 234677998888776 24689999999999999965321 111222211111 1235566
Q ss_pred eeeCCcc---cccccccccCHHHHHHHHHHHHc--CCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCH
Q 037566 206 RYLGNKY---TWEHFCDMSDSRVLAEQQIWAAT--TDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDA 280 (360)
Q Consensus 206 ~~~G~~~---~~~~~~d~~~v~dla~a~~~a~~--~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~ 280 (360)
.+.|+.. ...+.+|++|++|+|.++..++. .....+++|||++++.+|+.|+++.|++.+|.+.+.. ..|.
T Consensus 224 ~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~--~~~~-- 299 (346)
T d1ek6a_ 224 NVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK--VVAR-- 299 (346)
T ss_dssp EEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEE--EECC--
T ss_pred EEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeE--ECCC--
Confidence 6555422 23467899999999999877643 3344578999999999999999999999999765421 0000
Q ss_pred HHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 281 VEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
.+.. ....++|++|+++ |||+|.++++|+|+++++||+++
T Consensus 300 --------------------~~~e----------------~~~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n 340 (346)
T d1ek6a_ 300 --------------------REGD----------------VAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN 340 (346)
T ss_dssp --------------------CTTC----------------CSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred --------------------CCCC----------------CCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhC
Confidence 0001 1245789999987 79999999999999999999986
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4e-36 Score=282.01 Aligned_cols=296 Identities=14% Similarity=0.154 Sum_probs=207.6
Q ss_pred CchHHHHHHHhcCCCCCCCC-cEEEEEecCCCCC--CCCCCCceeeEeeccCChHHHHH-HHccCCCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGGP-WKVYGTARRPPPS--WFPSSHVDHYITFDALDSTDTTQ-KLSSISQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g-~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~l~~-~l~~~~~~v~~V~h~A~~~~ 76 (360)
|||++|+++|++ +| ++|+++++..... ....++++ ++.+||+|.+++.+ ++++ +|+|+|+|+...
T Consensus 11 fiG~~l~~~Ll~------~g~~~V~~ld~~~~~~~~~~~~~~~~-~i~~Di~~~~~~~~~~~~~----~d~Vih~a~~~~ 79 (342)
T d2blla1 11 FIGNHLTERLLR------EDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEWIEYHVKK----CDVVLPLVAIAT 79 (342)
T ss_dssp HHHHHHHHHHHH------STTCEEEEEESCCGGGGGGTTCTTEE-EEECCTTTCSHHHHHHHHH----CSEEEECBCCCC
T ss_pred HHHHHHHHHHHH------CCCCEEEEEeCCCcchhhhccCCCeE-EEECccCChHHHHHHHHhC----CCcccccccccc
Confidence 589999999998 77 5899998864321 23457899 99999999877655 5565 589999998643
Q ss_pred C-----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC-----C
Q 037566 77 K-----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR-----L 146 (360)
Q Consensus 77 ~-----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~-----~ 146 (360)
. ++...+.+|+.||.|++++|.+. ++ +++|.||+.+||... ..+.+|..+. .
T Consensus 80 ~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~-~~~~~ss~~~~~~~~------------~~~~~~~~~~~~~~~~ 141 (342)
T d2blla1 80 PIEYTRNPLRVFELDFEENLRIIRYCVKY-----RK-RIIFPSTSEVYGMCS------------DKYFDEDHSNLIVGPV 141 (342)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----TC-EEEEECCGGGGBTCC------------CSSBCTTTCCCBCCCT
T ss_pred ccccccCCccccccccccccccccccccc-----cc-ccccccccccccccc------------cccccccccccccccc
Confidence 2 56678999999999999999886 55 557889999998642 2223332221 1
Q ss_pred CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcc------hhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 147 PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLN------NSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
..|.+.|+.+|.++| +..+++++++||+.+|||+..... ...... +...+ ..|.++.++|++.
T Consensus 142 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~--~~g~~~~~~~~g~- 217 (342)
T d2blla1 142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQ-LILNL--VEGSPIKLIDGGK- 217 (342)
T ss_dssp TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHH-HHHHH--HHTCCEEEGGGSC-
T ss_pred CCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchH-HHHHH--HhCCCccccCCCC-
Confidence 245778999999888 345899999999999999764321 111111 11111 2477888888886
Q ss_pred ccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC-cccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHH
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD-VFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEI 290 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~-~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
..++++|++|+|++++.++.++ ...|++|||++|+ .+|+.|+++.|++.+|....... ..+......... ...
T Consensus 218 --~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~-~~~~~~~~~~~~-~~~ 293 (342)
T d2blla1 218 --QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH-FPPFAGFRVVES-SSY 293 (342)
T ss_dssp --CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGG-SCCCCCEEEC------
T ss_pred --eeeeecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccc-cCcccccceecc-ccc
Confidence 6789999999999999998764 3458999999876 58999999999999997654210 001110000000 000
Q ss_pred HHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 291 WDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
+ +.... | .....+|++|+|+ |||+|+++++|||+++++||+++
T Consensus 294 ~-------~~~~~-----------~-----~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~ 337 (342)
T d2blla1 294 Y-------GKGYQ-----------D-----VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 337 (342)
T ss_dssp ------------------------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred c-------ccccc-----------c-----ccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhC
Confidence 0 00000 0 1134679999987 79999999999999999999774
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.9e-35 Score=278.11 Aligned_cols=288 Identities=11% Similarity=0.027 Sum_probs=208.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCC--C-C-----CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPP--P-S-----WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~--~-~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
|||+||+++|++ .|++|+++.++.. . . .....+++ ++.+||+|.+.+.++++++ +.|+|+|
T Consensus 13 fIGs~lv~~L~~------~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~-~~~~Di~d~~~~~~~~~~~----~~v~~~a 81 (346)
T d1oc2a_ 13 FIGSNFVHYVYN------NHPDVHVTVLDKLTYAGNKANLEAILGDRVE-LVVGDIADAELVDKLAAKA----DAIVHYA 81 (346)
T ss_dssp HHHHHHHHHHHH------HCTTCEEEEEECCCTTCCGGGTGGGCSSSEE-EEECCTTCHHHHHHHHTTC----SEEEECC
T ss_pred HHHHHHHHHHHH------CCCCeEEEEEeCCCccccHHHHHHhhcCCeE-EEEccCCCHHHHHHHHhhh----hhhhhhh
Confidence 689999999999 8887555544321 1 1 12356899 9999999999999999885 5689998
Q ss_pred eecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccC-CcCCCCCCCCCCCCCC
Q 037566 73 FQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVG-QLIGHDPPFKEDSLRL 146 (360)
Q Consensus 73 ~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g-~~~~~~~p~~E~~p~~ 146 (360)
+... .++.+++++|+.||.|++++|... + .++|++||+++||..... +... .........+|+++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-----~-~k~i~~ss~~vyg~~~~~-~~~~~~~~~~~~~~~e~~~~~ 154 (346)
T d1oc2a_ 82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-----D-IRFHHVSTDEVYGDLPLR-EDLPGHGEGPGEKFTAETNYN 154 (346)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-----T-CEEEEEEEGGGGCCBCCG-GGSTTTTCSTTSSBCTTSCCC
T ss_pred hcccccchhhCcccceeeehHhHHhhhhhhccc-----c-ccccccccceEecccCcc-ccccccccCcccccccCCCCC
Confidence 7532 366788999999999999999987 4 478999999999842100 0000 0000123456666654
Q ss_pred CCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 147 PFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
|.+.|+.+|+.+| +..+++++++||++||||+........ ..+.. + ..+.++.+.|++. +.+|
T Consensus 155 --p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~--~~i~~-~--~~~~~~~i~~~g~---~~r~ 224 (346)
T d1oc2a_ 155 --PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIP--RQITN-I--LAGIKPKLYGEGK---NVRD 224 (346)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHH--HHHHH-H--HHTCCCEEETTSC---CEEE
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhH--HHHHH-H--HcCCceeEeCCCC---cccc
Confidence 5788999998888 346899999999999999764322211 11111 1 2456677788886 6789
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhC
Q 037566 220 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHG 299 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
++|++|+|++++.+..++ ..|+.||+++++..++.|+++.|.+.+|.+..... ..
T Consensus 225 ~i~v~D~a~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~----------------------- 279 (346)
T d1oc2a_ 225 WIHTNDHSTGVWAILTKG-RMGETYLIGADGEKNNKEVLELILEKMGQPKDAYD-HV----------------------- 279 (346)
T ss_dssp CEEHHHHHHHHHHHHHHC-CTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSE-EE-----------------------
T ss_pred ccchhhHHHHHHHHHhhc-ccCccccccccccccchHHHHHHHHHhCCCCcceE-EC-----------------------
Confidence 999999999998887654 56789999999999999999999999987544320 00
Q ss_pred CCccCcccccccchhhhhhccccccccchhHHHH-cCCCccc-ccHHHHHHHHHHHHHC
Q 037566 300 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFA-DTMKSIRTWVKKLREM 356 (360)
Q Consensus 300 l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~-~~~~~l~~~~~~~~~~ 356 (360)
...+.. ...+.+|++|+++ |||+|++ +++|||+++++||+++
T Consensus 280 -~~~~~~--------------~~~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n 323 (346)
T d1oc2a_ 280 -TDRAGH--------------DLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN 323 (346)
T ss_dssp -CCCTTC--------------CCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred -CCCCCC--------------CceeeeCHHHHHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence 000000 1145689999986 7999997 6999999999999875
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=8.7e-35 Score=272.03 Aligned_cols=289 Identities=13% Similarity=0.050 Sum_probs=209.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------------CCCCCCceeeEeeccCChHHHHHHHccCCCCccE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTH 67 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~ 67 (360)
|||+||+++|++ +||+|++++|..+.. ......++ ++.+|+++.+.+.+.+++.. +|+
T Consensus 12 fiG~~lv~~Ll~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Di~~~~~~~~~~~~~~--~D~ 82 (339)
T d1n7ha_ 12 QDGSYLTEFLLG------KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMK-LHYADLTDASSLRRWIDVIK--PDE 82 (339)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCCSSCCCTTTTTTC--------CCEE-EEECCTTCHHHHHHHHHHHC--CSE
T ss_pred HHHHHHHHHHHH------CcCEEEEEECCCcccchhhhhhhhhhhhhccccceE-EEEccccCHHHHHHHHhhhc--cch
Confidence 589999999999 999999999964320 01134578 99999999999999998765 799
Q ss_pred EEEeeeecC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 68 LFWVMFQRL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 68 V~h~A~~~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+|+|+... .++...+.+|+.||.+++++++..........++++.||+.+|+. ...+.+|+
T Consensus 83 Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~-------------~~~~~~E~ 149 (339)
T d1n7ha_ 83 VYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGS-------------TPPPQSET 149 (339)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTT-------------SCSSBCTT
T ss_pred hhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceeccc-------------CCCCCCCC
Confidence 999998533 367788999999999999999764100112446777777777653 24568999
Q ss_pred CCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 143 SLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
+|.. |.+.|+.+|+.+| +..+++++++||++||||+................. .....+..+.|++.
T Consensus 150 ~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~-~~~~~~~~~~g~~~--- 223 (339)
T d1n7ha_ 150 TPFH--PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRI-KVGLQTKLFLGNLQ--- 223 (339)
T ss_dssp SCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHH-HHTSCCCEEESCTT---
T ss_pred CCCC--CcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHH-hcCCCCeEEeCCCC---
Confidence 9875 5888999998888 346899999999999999754322111111111111 12344556678776
Q ss_pred ccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHH
Q 037566 216 HFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIV 295 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (360)
+.+|++|++|+|+++.+++..+. +..++++.+...++.++++.+++.+|...... ..+..
T Consensus 224 ~~rd~~~v~D~a~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~--------------- 283 (339)
T d1n7ha_ 224 ASRDWGFAGDYVEAMWLMLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDY---VEIDQ--------------- 283 (339)
T ss_dssp CEEECEEHHHHHHHHHHHHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGT---EEECG---------------
T ss_pred ccccceeeehHHHHHHHHHhcCC--CCccccccccccccchhhhhhhhhhhcccCce---eeecc---------------
Confidence 67899999999999999887653 45677888999999999999999999765421 00000
Q ss_pred HHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 296 EKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
+ ...+.. ...+..|++||++ |||+|+++++|||++|++||.+
T Consensus 284 -~-~~r~~~----------------~~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~ 326 (339)
T d1n7ha_ 284 -R-YFRPAE----------------VDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLE 326 (339)
T ss_dssp -G-GSCSSC----------------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred -C-CCCCCC----------------CCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 0 000100 1245679999987 7999999999999999999965
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8e-35 Score=269.82 Aligned_cols=275 Identities=13% Similarity=0.096 Sum_probs=206.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
|||++|+++|++ +|+.|++++++. ..|++|.+.+.+.+++.. +|.|+|+|+...
T Consensus 13 fiG~~l~~~L~~------~g~~vi~~~~~~--------------~~~~~~~~~~~~~~~~~~--~d~v~~~a~~~~~~~~ 70 (315)
T d1e6ua_ 13 MVGSAIRRQLEQ------RGDVELVLRTRD--------------ELNLLDSRAVHDFFASER--IDQVYLAAAKVGGIVA 70 (315)
T ss_dssp HHHHHHHHHHTT------CTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHC--CSEEEECCCCCCCHHH
T ss_pred HHHHHHHHHHHH------CcCEEEEecCch--------------hccccCHHHHHHHHhhcC--CCEEEEcchhcccccc
Confidence 589999999999 899988776432 247888999988888754 799999986432
Q ss_pred --CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC---CCC
Q 037566 77 --KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF---PNF 151 (360)
Q Consensus 77 --~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~---p~~ 151 (360)
.++.+++++|+.||.|||++|.+. +++||||+||.+|||.. ...|++|+.+.... |.+
T Consensus 71 ~~~~~~~~~~~Nv~gt~~ll~~a~~~-----~v~~~i~~SS~~vyg~~------------~~~~~~E~~~~~~~~~~~~~ 133 (315)
T d1e6ua_ 71 NNTYPADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSCIYPKL------------AKQPMAESELLQGTLEPTNE 133 (315)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGSCTT------------CCSSBCGGGTTSSCCCGGGH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECCceEcCCC------------CCCCccCCccccCCCCCCCC
Confidence 256778899999999999999987 89999999999999853 34578888765422 356
Q ss_pred cHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCc---chhHHHHHHHHH-HHhhcCCCeeeeCCcccccccccc
Q 037566 152 YYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSL---NNSLLTLAVYAT-ICRHQGLPFRYLGNKYTWEHFCDM 220 (360)
Q Consensus 152 ~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~d~ 220 (360)
.|+.+|+.+| +..+++++++||++||||++... ......+..... .....+.++...|++. ..+++
T Consensus 134 ~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~---~~~~~ 210 (315)
T d1e6ua_ 134 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGT---PMREF 210 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSC---CEECE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCc---eEEEE
Confidence 7999999888 34589999999999999986421 111111111111 1123466777788876 56899
Q ss_pred cCHHHHHHHHHHHHcCC--------CCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHH
Q 037566 221 SDSRVLAEQQIWAATTD--------RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWD 292 (360)
Q Consensus 221 ~~v~dla~a~~~a~~~~--------~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
++++|+++++..++... ......+|++.+...++.++.+.+++.+|.+.... +.
T Consensus 211 ~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~-----~~------------- 272 (315)
T d1e6ua_ 211 LHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVV-----FD------------- 272 (315)
T ss_dssp EEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEE-----EE-------------
T ss_pred EEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceE-----EC-------------
Confidence 99999999998877543 22357899999999999999999999999765310 00
Q ss_pred HHHHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHHHHCC
Q 037566 293 EIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMK 357 (360)
Q Consensus 293 ~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~~~~g 357 (360)
.. .+.. .+....|++|+|+|||+|+++++|||++|++||++++
T Consensus 273 ------~~--~~~~--------------~~~~~~d~sk~k~Lg~~p~~~l~e~i~~ti~w~~~N~ 315 (315)
T d1e6ua_ 273 ------AS--KPDG--------------TPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQ 315 (315)
T ss_dssp ------TT--SCCC--------------CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred ------CC--CCCC--------------CceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHHcC
Confidence 00 0000 1134679999999999999999999999999999864
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=3.1e-34 Score=273.38 Aligned_cols=297 Identities=12% Similarity=0.059 Sum_probs=210.4
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCC------------------------CCCCCCCceeeEeeccCChHHHHH
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPP------------------------SWFPSSHVDHYITFDALDSTDTTQ 56 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~------------------------~~~~~~~v~~~v~gDl~d~~~l~~ 56 (360)
|||+||+++||++ .||+|+++|+-... .......++ ++.+|++|.+.+.+
T Consensus 13 fIGs~lv~~LL~~-----~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Di~d~~~l~~ 86 (383)
T d1gy8a_ 13 YIGSHFVRALLRD-----TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAA-LEVGDVRNEDFLNG 86 (383)
T ss_dssp HHHHHHHHHHHHH-----CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCE-EEESCTTCHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceE-EEECcccCHHHhhh
Confidence 6899999999961 68999999851110 001234678 99999999999999
Q ss_pred HHccCCCCccEEEEeeeecCC-----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCC
Q 037566 57 KLSSISQEVTHLFWVMFQRLK-----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQ 131 (360)
Q Consensus 57 ~l~~~~~~v~~V~h~A~~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~ 131 (360)
+++.... +|+|||+|+.... ++..+.++|+.||.++|+++++. +++++++.||+.+|+.... .+.
T Consensus 87 ~~~~~~~-~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-----~~~~~~~~~s~~~~~~~~~----~~~ 156 (383)
T d1gy8a_ 87 VFTRHGP-IDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-----KCDKIIFSSSAAIFGNPTM----GSV 156 (383)
T ss_dssp HHHHSCC-CCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGTBSCCC-------
T ss_pred hhhccce-eehhhcccccccccccccccccccccccccccccchhhhcc-----CCccccccccccccccccc----ccc
Confidence 9987653 7999999985332 55678899999999999999987 7899999999999975311 000
Q ss_pred cCCCCCCCCCCCCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcc-------hhHHHHHHHHHH
Q 037566 132 LIGHDPPFKEDSLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLN-------NSLLTLAVYATI 197 (360)
Q Consensus 132 ~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~-------~~~~~~~~~~~~ 197 (360)
.....|..|+.+.. |.+.|+.+|+..| ...+++++++||++||||++.... ....+..+-..+
T Consensus 157 -~~~~~~~~e~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~ 233 (383)
T d1gy8a_ 157 -STNAEPIDINAKKS--PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVM 233 (383)
T ss_dssp ---CCCCBCTTSCCB--CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHH
T ss_pred -cccccccccccCCC--CCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHH
Confidence 01234677777754 5788999998887 346899999999999999874211 111111111111
Q ss_pred Hh-------------hcCCCeeeeCCcc---cccccccccCHHHHHHHHHHHHcC--------CCCCCCceeccCCCccc
Q 037566 198 CR-------------HQGLPFRYLGNKY---TWEHFCDMSDSRVLAEQQIWAATT--------DRAKNQAFNCTNGDVFT 253 (360)
Q Consensus 198 ~~-------------~~~~~~~~~G~~~---~~~~~~d~~~v~dla~a~~~a~~~--------~~~~g~~yni~~g~~~s 253 (360)
.. ..+.++.+.|+.. ...+.+|++|++|+|++++.++.. ....+++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s 313 (383)
T d1gy8a_ 234 SDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYS 313 (383)
T ss_dssp HHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEE
T ss_pred hhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCcee
Confidence 10 1234455545321 112678999999999999887642 12346899999999999
Q ss_pred HHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH
Q 037566 254 WKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE 333 (360)
Q Consensus 254 ~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~ 333 (360)
+.|+++.+++.+|.+.+.. .. ...+.. ....++|++|+++
T Consensus 314 ~~el~~~i~~~~~~~~~~~----~~--------------------~~~~~d----------------~~~~~~d~~k~~k 353 (383)
T d1gy8a_ 314 VREVIEVARKTTGHPIPVR----EC--------------------GRREGD----------------PAYLVAASDKARE 353 (383)
T ss_dssp HHHHHHHHHHHHCCCCCEE----EE--------------------CCCTTC----------------CSEECBCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCceE----EC--------------------CCCCCC----------------cCEeeeCHHHHHH
Confidence 9999999999999765421 00 000000 1135779999987
Q ss_pred -cCCCcccccHHHHHHH-HHHHHHC
Q 037566 334 -FGFFGFADTMKSIRTW-VKKLREM 356 (360)
Q Consensus 334 -lG~~p~~~~~~~l~~~-~~~~~~~ 356 (360)
|||+|+++++|+|++| +.||+++
T Consensus 354 ~LGw~P~~~l~e~i~~t~~~w~~~~ 378 (383)
T d1gy8a_ 354 VLGWKPKYDTLEAIMETSWKFQRTH 378 (383)
T ss_dssp HTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HHCCccCCCHHHHHHHHHHHHHHhC
Confidence 8999999999999887 6999987
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=6.7e-34 Score=265.08 Aligned_cols=296 Identities=12% Similarity=0.062 Sum_probs=205.0
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMF 73 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~ 73 (360)
|||+||+++|++ +||+|+++++-.... .....+++ ++.+||+|.+++.++++++. +|+|||+|+
T Consensus 11 fIGs~lv~~Ll~------~g~~V~~id~~~~~~~~~~~~~~~~~~~~~-~i~~Di~~~~~l~~~~~~~~--~d~Vih~aa 81 (338)
T d1orra_ 11 FLGSNLASFALS------QGIDLIVFDNLSRKGATDNLHWLSSLGNFE-FVHGDIRNKNDVTRLITKYM--PDSCFHLAG 81 (338)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCCSTTHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHHHC--CSEEEECCC
T ss_pred HHHHHHHHHHHH------CcCEEEEEECCCcccchhHHHHhhccCCcE-EEEcccCCHHHHHHHHHhcC--CceEEeecc
Confidence 689999999999 899999998632221 01246899 99999999999999999986 799999998
Q ss_pred ecCC-----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccc-cccccCCc----ccCCcCCCCCCCCCCC
Q 037566 74 QRLK-----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHY-MGPVFDPS----LVGQLIGHDPPFKEDS 143 (360)
Q Consensus 74 ~~~~-----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vY-g~~~~~~~----~~g~~~~~~~p~~E~~ 143 (360)
.... ++..++++|+.||.|||++|.+. +++++++.||++++ +....... .............+..
T Consensus 82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T d1orra_ 82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST 156 (338)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred cccccccccChHHHHHHHHHHHHHHHHhhhcc-----cccccccccccccccccccccccccccccccccccccCcccCC
Confidence 5332 66788999999999999999987 56665555554444 43210000 0000000011122233
Q ss_pred CCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHH--HhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATI--CRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~G~~~~ 213 (360)
+. .|.+.|+..|...| ...++..+++|++++||+.... .........+...+ ....+.++.+.|++.
T Consensus 157 ~~--~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~- 233 (338)
T d1orra_ 157 QL--DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGK- 233 (338)
T ss_dssp CC--CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSC-
T ss_pred cc--ccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCc-
Confidence 32 24667888777766 3568999999999999876532 22222211122222 122467888889886
Q ss_pred ccccccccCHHHHHHHHHHHHcCC-CCCCCceeccC--CCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHH
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD-RAKNQAFNCTN--GDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEI 290 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~-~~~g~~yni~~--g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
..+|++|++|+|++++.++.++ ...|++||+.. +..+++.|++..+.+.+|.+.+.. ..+
T Consensus 234 --~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~--~~~------------- 296 (338)
T d1orra_ 234 --QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFT--NLP------------- 296 (338)
T ss_dssp --CEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEE--EEC-------------
T ss_pred --eeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeE--eCC-------------
Confidence 6689999999999999988654 34589999954 457899999999999998764411 000
Q ss_pred HHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 291 WDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
..+.. ......|++|||+ |||+|.++++|||+++++||+.
T Consensus 297 ---------~~~~~----------------~~~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 297 ---------VRESD----------------QRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp ---------CCSSC----------------CSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred ---------CCCCC----------------cCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence 00111 1135679999987 7999999999999999999985
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.1e-33 Score=268.46 Aligned_cols=296 Identities=12% Similarity=0.045 Sum_probs=204.2
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecC------------CC-CCC-----------CCCCCceeeEeeccCChHHHHH
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARR------------PP-PSW-----------FPSSHVDHYITFDALDSTDTTQ 56 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~------------~~-~~~-----------~~~~~v~~~v~gDl~d~~~l~~ 56 (360)
|||+||+++|++ +||+|+++|+- .. +.. ....+++ ++.+||+|.+.+.+
T Consensus 12 fiG~~lv~~Ll~------~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~Dl~d~~~l~~ 84 (393)
T d1i24a_ 12 YCGWATALHLSK------KNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIE-LYVGDICDFEFLAE 84 (393)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCE-EEESCTTSHHHHHH
T ss_pred HHHHHHHHHHHH------CcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcE-EEEccCCCHHHHHH
Confidence 589999999999 99999999721 00 000 0135789 99999999999999
Q ss_pred HHccCCCCccEEEEeeeecC-----CC---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcc
Q 037566 57 KLSSISQEVTHLFWVMFQRL-----KS---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSL 128 (360)
Q Consensus 57 ~l~~~~~~v~~V~h~A~~~~-----~~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~ 128 (360)
++++++ +|+|||+|+... .+ +..++++|+.||.|+|++|++. + ..++|+++||..+|+....+
T Consensus 85 ~~~~~~--~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~-~~~~~i~~ss~~~~~~~~~~--- 155 (393)
T d1i24a_ 85 SFKSFE--PDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---G-EECHLVKLGTMGEYGTPNID--- 155 (393)
T ss_dssp HHHHHC--CSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---C-TTCEEEEECCGGGGCCCSSC---
T ss_pred HHHhhc--chheeccccccccccccccccccccccccccccccHHHHHHHHh---c-cccceeeccccccccccccc---
Confidence 999986 799999998432 12 3457899999999999999987 2 34578888888888753110
Q ss_pred cCCcCCCCCCCCC-----CCCCCCCCCCcHHHHHHHHh-------cCCCCcEEEEcCCCeeecCCCCcc-----------
Q 037566 129 VGQLIGHDPPFKE-----DSLRLPFPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLN----------- 185 (360)
Q Consensus 129 ~g~~~~~~~p~~E-----~~p~~p~p~~~Y~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~~~----------- 185 (360)
.. ....+..| +.+....|.+.|+.+|+++| +..+++++++||++||||+.....
T Consensus 156 ~~---~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~ 232 (393)
T d1i24a_ 156 IE---EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDY 232 (393)
T ss_dssp BC---SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCC
T ss_pred cc---cccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccc
Confidence 00 00001111 11122246778999999988 356899999999999999753210
Q ss_pred ----hhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceec-cCCCcccHHHHHHH
Q 037566 186 ----NSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNC-TNGDVFTWKSLWKL 260 (360)
Q Consensus 186 ----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni-~~g~~~s~~el~~~ 260 (360)
.......+-. ...+.++.+.|++. ..+|++|++|+|++++++++++...|+.+++ ++++.+|++|+++.
T Consensus 233 ~~~~~~~i~~~~~~---~~~~~~~~i~g~~~---~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~ 306 (393)
T d1i24a_ 233 DAVFGTALNRFCVQ---AAVGHPLTVYGKGG---QTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASL 306 (393)
T ss_dssp STTTCCHHHHHHHH---HHHTCCEEEETTSC---CEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHH
T ss_pred ccccccchhhhhHH---hhcCCeeEEeeecc---cccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHH
Confidence 1111111111 12477888889887 6789999999999999999877666664433 35678999999999
Q ss_pred HHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCccc
Q 037566 261 LSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFA 340 (360)
Q Consensus 261 ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~ 340 (360)
+.+..+........ .. ...+.... + ......|++|+++|||+|.+
T Consensus 307 i~~~~~~~~~~~~~-~~----------------------~~~~~~~~-------~-----~~~~~~d~~k~~~LGw~P~~ 351 (393)
T d1i24a_ 307 VTKAGSKLGLDVKK-MT----------------------VPNPRVEA-------E-----EHYYNAKHTKLMELGLEPHY 351 (393)
T ss_dssp HHHHHHTTTCCCCE-EE----------------------ECCSSCSC-------S-----SCCCCBCCCHHHHTTCCCCC
T ss_pred HHHHHHhhCCCcce-ee----------------------ccCCCCCC-------C-----ccEecCCHHHHHHcCCcccc
Confidence 98876532221100 00 00000000 0 12357799999999999999
Q ss_pred ccHHHHHHHHHHHHHC
Q 037566 341 DTMKSIRTWVKKLREM 356 (360)
Q Consensus 341 ~~~~~l~~~~~~~~~~ 356 (360)
+++++++++++|+++.
T Consensus 352 ~~~~~i~~~~~~~~~~ 367 (393)
T d1i24a_ 352 LSDSLLDSLLNFAVQF 367 (393)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999999875
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=5.2e-32 Score=254.65 Aligned_cols=282 Identities=12% Similarity=0.036 Sum_probs=199.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
|||++|+++|++ +||+|++++|+..... ...++++ ++.+||+|++.+.+++++++ +++|+|+|+.
T Consensus 19 fIGs~lv~~Ll~------~g~~V~~~~r~~~~~~~~~~~~~~~~~i~-~~~~Dl~d~~~l~~~~~~~~--~~~v~~~aa~ 89 (356)
T d1rkxa_ 19 FKGGWLSLWLQT------MGATVKGYSLTAPTVPSLFETARVADGMQ-SEIGDIRDQNKLLESIREFQ--PEIVFHMAAQ 89 (356)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSCSSSSCHHHHTTTTTTSE-EEECCTTCHHHHHHHHHHHC--CSEEEECCSC
T ss_pred HHHHHHHHHHHH------CCCEEEEEECCCCccHHHHhhhhcccCCe-EEEeeccChHhhhhhhhhch--hhhhhhhhcc
Confidence 589999999999 9999999999765421 1245799 99999999999999999876 7999999985
Q ss_pred cC-----CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 75 RL-----KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 75 ~~-----~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
.. ..+..+..+|+.||.|+++++.+. ...+++++.||+.+|+... ...+.+|+.+.. |
T Consensus 90 ~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~----~~~~~~~~~s~~~~~~~~~-----------~~~~~~~~~~~~--p 152 (356)
T d1rkxa_ 90 PLVRLSYSEPVETYSTNVMGTVYLLEAIRHV----GGVKAVVNITSDKCYDNKE-----------WIWGYRENEAMG--G 152 (356)
T ss_dssp CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH----CCCCEEEEECCGGGBCCCC-----------SSSCBCTTSCBC--C
T ss_pred ccccccccCCccccccccccchhhhhhhhcc----ccccccccccccccccccc-----------cccccccccccC--C
Confidence 33 256788999999999999999987 2455666665555554321 245667777654 4
Q ss_pred CCcHHHHHHHHh----------------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 150 NFYYAVEDIAAS----------------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 150 ~~~Y~~ek~l~e----------------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
...|+.+|...| ...++.++++||++||||++.....+ .+. +...+ ..+.+ ...+.+.
T Consensus 153 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~-i~~-~~~~~--~~~~~-~~~~~~~- 226 (356)
T d1rkxa_ 153 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRI-VPD-ILRAF--EQSQP-VIIRNPH- 226 (356)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCH-HHH-HHHHH--HTTCC-EECSCTT-
T ss_pred CCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHH-HHH-HHHHH--hCCCc-eEEeecc-
Confidence 666777665554 13468999999999999987432222 111 11122 13344 3456554
Q ss_pred ccccccccCHHHHHHHHHHHHcCCCCC------CCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHh
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDRAK------NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEK 287 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~~~------g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~ 287 (360)
..++++|++|+|++++.++..+... +..++..++..+++.++++.+.+.+|...... +.. .
T Consensus 227 --~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~-----~- 293 (356)
T d1rkxa_ 227 --AIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ-----LDG-----N- 293 (356)
T ss_dssp --CEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEE-----C---------
T ss_pred --ccccccccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEE-----EcC-----C-
Confidence 5678899999999999887643222 23334445678999999999999999754421 000 0
Q ss_pred hHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHH
Q 037566 288 GEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLRE 355 (360)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~ 355 (360)
..+.+ ...+..|++|||+ |||+|+++++|||++|++||++
T Consensus 294 ------------~~~~~----------------~~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~ 334 (356)
T d1rkxa_ 294 ------------AHPHE----------------AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN 334 (356)
T ss_dssp ----------------C----------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred ------------CCCCC----------------cCeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 00111 1135789999987 7999999999999999999986
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.96 E-value=1.1e-29 Score=238.06 Aligned_cols=283 Identities=13% Similarity=0.077 Sum_probs=189.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEee
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVM 72 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A 72 (360)
|||+||+++|++ +|++|++++|+.... .......+.++.+|++|.+++.+++.++ ++|+|+|
T Consensus 22 fIGs~l~~~Ll~------~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~v~~~a 91 (342)
T d1y1pa1 22 FVASHVVEQLLE------HGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA----AGVAHIA 91 (342)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC----SEEEECC
T ss_pred HHHHHHHHHHHH------CcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccc----hhhhhhc
Confidence 589999999999 899999999864221 0011233316889999999999998884 7999999
Q ss_pred eecC--CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC-------
Q 037566 73 FQRL--KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS------- 143 (360)
Q Consensus 73 ~~~~--~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~------- 143 (360)
+... .++..+++.|+.||.|+|++|.+. +++++|||+||+.+++.... . ......+|+.
T Consensus 92 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~~~i~~SS~~~~~~~~~-----~---~~~~~~~e~~~~~~~~~ 159 (342)
T d1y1pa1 92 SVVSFSNKYDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKP-----N---VEGIYLDEKSWNLESID 159 (342)
T ss_dssp CCCSCCSCHHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCT-----T---CCCCEECTTCCCHHHHH
T ss_pred ccccccccccccccchhhhHHHHHHhhhcc----cccccccccccceeeccCCC-----C---CCCcccccccccccccc
Confidence 8532 356778899999999999999885 37999999999876543211 0 0122233332
Q ss_pred ---------CCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCe
Q 037566 144 ---------LRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 144 ---------p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (360)
+. .|.+.|+.+|.++| ...++.++++||++||||+............+...+. .+...
T Consensus 160 ~~~~~~e~~~~--~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~--~g~~~ 235 (342)
T d1y1pa1 160 KAKTLPESDPQ--KSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLF--NGEVS 235 (342)
T ss_dssp HHHHSCTTSTT--HHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHH--TTCCC
T ss_pred ccccccccCCC--CCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHH--cCCcC
Confidence 22 23556999988776 2457899999999999996432111111111112221 23333
Q ss_pred ee-eCCcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHH
Q 037566 206 RY-LGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMM 284 (360)
Q Consensus 206 ~~-~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~ 284 (360)
+. .++ ..++++|++|+|++++.+++++...|+ ||+++++.+|++|+++.|++.+..... |..+
T Consensus 236 ~~~~~~-----~~~~~v~v~Dva~~~i~~l~~~~~~g~-~~~~~~~~~t~~eia~~i~k~~p~~~~------~~~~---- 299 (342)
T d1y1pa1 236 PALALM-----PPQYYVSAVDIGLLHLGCLVLPQIERR-RVYGTAGTFDWNTVLATFRKLYPSKTF------PADF---- 299 (342)
T ss_dssp HHHHTC-----CSEEEEEHHHHHHHHHHHHHCTTCCSC-EEEECCEEECHHHHHHHHHHHCTTSCC------CCCC----
T ss_pred cccCCc-----cceeeeeHHHHHHHHHHhhcCccccce-EEEEcCCceEHHHHHHHHHHHcCCCcC------CccC----
Confidence 22 233 346789999999999999888766555 668889999999999999998732211 1110
Q ss_pred HHhhHHHHHHHHHhCCCccCcccccccchhhhhhccccccccchhHHHHcCCCcccccHHHHHHHHHHH
Q 037566 285 KEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKL 353 (360)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~d~~Kar~lG~~p~~~~~~~l~~~~~~~ 353 (360)
+-...... ..+...+.+|+|.+||.|.++++|+|+++++-+
T Consensus 300 --------------~~~~~~~~--------------~~~~~~s~~~~k~lg~~~~~~lee~i~d~I~s~ 340 (342)
T d1y1pa1 300 --------------PDQGQDLS--------------KFDTAPSLEILKSLGRPGWRSIEESIKDLVGSE 340 (342)
T ss_dssp --------------CCCCCCCC--------------EECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCS
T ss_pred --------------CccCcccc--------------cccchHHHHHHHHcCCCCCcCHHHHHHHHHHhC
Confidence 00000100 113344666667899999999999999998643
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.96 E-value=6.6e-29 Score=225.35 Aligned_cols=260 Identities=11% Similarity=0.095 Sum_probs=195.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC---
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK--- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~--- 77 (360)
|||++|+++|.+ +||+|++++|+. +|++|.+++.+++++.+ +|+|+|+|+....
T Consensus 12 fiG~~l~~~L~~------~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~--~d~vih~a~~~~~~~~ 68 (281)
T d1vl0a_ 12 QLGREIQKQLKG------KNVEVIPTDVQD---------------LDITNVLAVNKFFNEKK--PNVVINCAAHTAVDKC 68 (281)
T ss_dssp HHHHHHHHHHTT------SSEEEEEECTTT---------------CCTTCHHHHHHHHHHHC--CSEEEECCCCCCHHHH
T ss_pred HHHHHHHHHHHh------CCCEEEEeechh---------------ccCCCHHHHHHHHHHcC--CCEEEeeccccccccc
Confidence 589999999998 999999998753 37889999999999876 7999999985432
Q ss_pred --ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 78 --SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 78 --~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.+......|+.++.++++++... ..+++++||+.+|+.. ...|.+|+++.. |...|+.
T Consensus 69 ~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~------------~~~~~~e~~~~~--~~~~~~~ 128 (281)
T d1vl0a_ 69 EEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGE------------AKEPITEFDEVN--PQSAYGK 128 (281)
T ss_dssp HHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSC------------CSSCBCTTSCCC--CCSHHHH
T ss_pred cccchhhcccccccccccccccccc------cccccccccceeeecc------------cccccccccccc--chhhhhh
Confidence 45667889999999999988775 4678888999999853 346788888764 4667888
Q ss_pred HHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIW 232 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~ 232 (360)
+|...| +..+.+++|+||++||||+.+ .... .+. .+ ..+.+..+.|+ ..+++++++|+|+++..
T Consensus 129 ~k~~~e~~~~~~~~~~~i~R~~~vyG~~~~-~~~~----~~~-~~--~~~~~~~~~~~-----~~~~~i~v~D~~~~~~~ 195 (281)
T d1vl0a_ 129 TKLEGENFVKALNPKYYIVRTAWLYGDGNN-FVKT----MIN-LG--KTHDELKVVHD-----QVGTPTSTVDLARVVLK 195 (281)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECSEESSSSC-HHHH----HHH-HH--HHCSEEEEESS-----CEECCEEHHHHHHHHHH
T ss_pred hhhHHHHHHHHhCCCccccceeEEeCCCcc-cccc----hhh-hh--ccCCceeecCC-----ceeccchhhhhhhhhhh
Confidence 888777 456789999999999999753 2111 111 11 13455555565 56799999999999999
Q ss_pred HHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccccccc
Q 037566 233 AATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFE 312 (360)
Q Consensus 233 a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 312 (360)
+++++. .++||+++++.+|+.|+++.+++.+|.+... .|++- +.++. ...+
T Consensus 196 ~~~~~~--~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i----~~i~~---------------~~~~~---~a~r----- 246 (281)
T d1vl0a_ 196 VIDEKN--YGTFHCTCKGICSWYDFAVEIFRLTGIDVKV----TPCTT---------------EEFPR---PAKR----- 246 (281)
T ss_dssp HHHHTC--CEEEECCCBSCEEHHHHHHHHHHHHCCCCEE----EEECS---------------TTSCC---SSCC-----
T ss_pred hhhhcc--cCceeEeCCCccchHHHHHHHHHHhCCCceE----EeccH---------------HHcCC---cCCC-----
Confidence 887543 3589999999999999999999999987542 11110 00010 0000
Q ss_pred hhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHH
Q 037566 313 ALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLR 354 (360)
Q Consensus 313 ~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~ 354 (360)
+.....|++|+++ +||+|+ +++|||+++++|+|
T Consensus 247 --------p~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 247 --------PKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ 280 (281)
T ss_dssp --------CSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred --------ccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence 1133579999987 699987 99999999999986
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=4.4e-28 Score=221.96 Aligned_cols=280 Identities=13% Similarity=0.105 Sum_probs=169.5
Q ss_pred CchHHHHHHHhcCCCCCCCCc-EEEEEecCCCCCCCCCCCceeeEeeccCChHHHHH-HHc--cCCCCccEEEEeeeecC
Q 037566 1 MAGLSLAEALKNNPTIPGGPW-KVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQ-KLS--SISQEVTHLFWVMFQRL 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~-~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~-~l~--~~~~~v~~V~h~A~~~~ 76 (360)
|||+|||++|++ +|+ +|+++++-...... ....+ ....|+.+.+.+.. .+. ... .+++|+|+|+...
T Consensus 10 fIGs~lv~~L~~------~g~~~V~~~d~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~aa~~~ 80 (307)
T d1eq2a_ 10 FIGSNIVKALND------KGITDILVVDNLKDGTKF-VNLVD-LNIADYMDKEDFLIQIMAGEEFG-DVEAIFHEGACSS 80 (307)
T ss_dssp HHHHHHHHHHHT------TTCCCEEEEECCSSGGGG-HHHHT-SCCSEEEEHHHHHHHHHTTCCCS-SCCEEEECCSCCC
T ss_pred HHHHHHHHHHHh------CCCCeEEEEECCCCcchh-hcccc-cchhhhccchHHHHHHhhhhccc-chhhhhhhccccc
Confidence 689999999999 895 79998754322100 00112 23334444433322 222 222 2689999987432
Q ss_pred ---CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcH
Q 037566 77 ---KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYY 153 (360)
Q Consensus 77 ---~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y 153 (360)
.+...+...|+.++.+++++++.. +++ +++.||+.+|+.. ...+..|+.+. .|.+.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~i~-~v~~ss~~~~~~~------------~~~~~~~~~~~--~~~~~Y 140 (307)
T d1eq2a_ 81 TTEWDGKYMMDNNYQYSKELLHYCLER-----EIP-FLYASSAATYGGR------------TSDFIESREYE--KPLNVY 140 (307)
T ss_dssp TTCCCHHHHHHHTHHHHHHHHHHHHHH-----TCC-EEEEEEGGGGTTC------------CSCBCSSGGGC--CCSSHH
T ss_pred ccccccccccccccccccccccccccc-----ccc-ccccccccccccc------------ccccccccccc--cccccc
Confidence 356677899999999999999987 565 5555666666533 12334444442 356779
Q ss_pred HHHHHHHh-------cCCCCcEEEEcCCCeeecCCCC--cchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHH
Q 037566 154 AVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS--LNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSR 224 (360)
Q Consensus 154 ~~ek~l~e-------~~~~~~~~ilRp~~vyGp~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~ 224 (360)
+.+|..+| ...+++++++||++||||++.. ....... .+...+. ....+..+.|++. ..++++|++
T Consensus 141 ~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~g~~~---~~r~~~~v~ 215 (307)
T d1eq2a_ 141 GYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAF-HLNTQLN-NGESPKLFEGSEN---FKRDFVYVG 215 (307)
T ss_dssp HHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHH-HHHHHHH-C----------------CBCEEEHH
T ss_pred ccccchhhhhccccccccccccccccceeEeecccccccccccccc-ccccccc-cccceeeecCccc---eeeeeeecc
Confidence 99888777 4578999999999999998642 1122211 1122221 1222333456654 568999999
Q ss_pred HHHHHHHHHHcCCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccC
Q 037566 225 VLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTK 304 (360)
Q Consensus 225 dla~a~~~a~~~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 304 (360)
|++.++..++..+ .++.||+++|+..|++|+++.+++..+..-... .|.+- . +.. .
T Consensus 216 d~~~~~~~~~~~~--~~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~---~~~~~------------~------~~~-~ 271 (307)
T d1eq2a_ 216 DVADVNLWFLENG--VSGIFNLGTGRAESFQAVADATLAYHKKGQIEY---IPFPD------------K------LKG-R 271 (307)
T ss_dssp HHHHHHHHHHHHC--CCEEEEESCSCCBCHHHHHHHC-------------------------------------------
T ss_pred cHHHHHHHHhhhc--cccccccccccchhHHHHHHHHHHhcCCCCeeE---eeCCc------------c------CCC-C
Confidence 9999999887643 457899999999999999999987765321111 01100 0 000 0
Q ss_pred cccccccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHH
Q 037566 305 MEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKL 353 (360)
Q Consensus 305 ~~~~~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~ 353 (360)
. ......|++|+++ +||+|.++++|||+++++||
T Consensus 272 --~-------------~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 272 --Y-------------QAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL 306 (307)
T ss_dssp --C-------------CCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred --C-------------ceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 0 1124569999988 59999999999999999997
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.93 E-value=4.1e-25 Score=201.26 Aligned_cols=273 Identities=10% Similarity=0.104 Sum_probs=181.6
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC----
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL---- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~---- 76 (360)
|||++|+++|++ .|+ +++++++.. .+.+|++|.+.+.+++++++ +|+|||+|+...
T Consensus 11 fiG~~l~~~L~~------~g~-~v~~~~~~~-----------~~~~Dl~~~~~~~~~i~~~~--~D~Vih~Aa~~~~~~~ 70 (298)
T d1n2sa_ 11 QVGWELQRSLAP------VGN-LIALDVHSK-----------EFCGDFSNPKGVAETVRKLR--PDVIVNAAAHTAVDKA 70 (298)
T ss_dssp HHHHHHHHHTTT------TSE-EEEECTTCS-----------SSCCCTTCHHHHHHHHHHHC--CSEEEECCCCCCHHHH
T ss_pred HHHHHHHHHHHh------CCC-EEEEECCCc-----------cccCcCCCHHHHHHHHHHcC--CCEEEEeccccccccc
Confidence 589999999998 776 555555432 35579999999999999876 799999998532
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.++...+.+|+.++.+|+++|.+. + .++++.||+.+|+.. ...|.+|+++.. |.+.|+.
T Consensus 71 ~~~~~~~~~~n~~~~~~l~~~~~~~-----~-~~~~~~ss~~~~~~~------------~~~~~~E~~~~~--p~~~y~~ 130 (298)
T d1n2sa_ 71 ESEPELAQLLNATSVEAIAKAANET-----G-AWVVHYSTDYVFPGT------------GDIPWQETDATS--PLNVYGK 130 (298)
T ss_dssp TTCHHHHHHHHTHHHHHHHHHHTTT-----T-CEEEEEEEGGGSCCC------------TTCCBCTTSCCC--CSSHHHH
T ss_pred ccCccccccccccccccchhhhhcc-----c-cccccccccccccCC------------CCCCCccccccC--CCchHhh
Confidence 366778899999999999999875 4 468888888888743 356889999865 5778998
Q ss_pred HHHHHh---cCCCCcEEEEcCCCee-ecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIII-GASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQI 231 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vy-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~ 231 (360)
+|..+| ........++|++..| |++. +.... +...+. .+.++...++ ...+++++.|+++++.
T Consensus 131 ~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~--~~~~~~~~~~-----~~~~~~~~~d~~~~~~ 197 (298)
T d1n2sa_ 131 TKLAGEKALQDNCPKHLIFRTSWVYAGKGN-NFAKT-----MLRLAK--ERQTLSVIND-----QYGAPTGAELLADCTA 197 (298)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECSEECSSSC-CHHHH-----HHHHHH--HCSEEEEECS-----CEECCEEHHHHHHHHH
T ss_pred hhhhhhhhHHhhhcccccccccceeeccCC-ccchh-----hhhhhc--ccceeecccc-----eeecccccchHHHHHH
Confidence 888777 2222334455555444 5443 22211 111111 2344444443 3456778888887766
Q ss_pred HHHc---CCCCCCCceeccCCCcccHHHHHHHHHHHhCCCccCCCcCCCCCHHHHHHHhhHHHHHHHHHhCCCccCcccc
Q 037566 232 WAAT---TDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEKHGLYKTKMEEI 308 (360)
Q Consensus 232 ~a~~---~~~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 308 (360)
.++. .....+++||+++++.+++.|+...+.+..+....... ... +. +.....+...
T Consensus 198 ~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~~---~~-------------~i~~~~~~~~ 257 (298)
T d1n2sa_ 198 HAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLA----LTE---LN-------------AVPTSAYPTP 257 (298)
T ss_dssp HHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCC----CCE---EE-------------EECSTTSCCS
T ss_pred HHHhhhhccccccccccccCCCceecHHHHHHHHhhhhccCcccc----ccc---ee-------------eeehhhcCcc
Confidence 5543 23345799999999999999999999887765433210 000 00 0000000000
Q ss_pred cccchhhhhhccccccccchhHHHH-cCCCcccccHHHHHHHHHHHHHC
Q 037566 309 TCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFADTMKSIRTWVKKLREM 356 (360)
Q Consensus 309 ~~~~~~d~~~~~~~~~~~d~~Kar~-lG~~p~~~~~~~l~~~~~~~~~~ 356 (360)
+ .++....+|++|+++ +||+|+ +++|||++++++|...
T Consensus 258 a---------~RP~~~~ld~~K~~~~~~~~~~-~~~~gl~~~i~~~~~~ 296 (298)
T d1n2sa_ 258 A---------SRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTT 296 (298)
T ss_dssp S---------CCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred C---------CCccccccCHHHHHHHHCCCCC-cHHHHHHHHHHHHHhh
Confidence 0 001234679999987 799987 9999999999998754
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.84 E-value=2.2e-21 Score=177.27 Aligned_cols=219 Identities=10% Similarity=0.007 Sum_probs=156.9
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEe
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWV 71 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~ 71 (360)
+||++|+++|++ +||+|++++|++.... +...+++ ++.+|++|.+++.++++++ ++++|+
T Consensus 14 ~iG~~l~~~L~~------~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~-~v~~d~~d~~~~~~~~~~~----~~~~~~ 82 (312)
T d1qyda_ 14 YIGKRIVNASIS------LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDDHQRLVDALKQV----DVVISA 82 (312)
T ss_dssp TTHHHHHHHHHH------TTCCEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSCHHHHHHHHTTC----SEEEEC
T ss_pred HHHHHHHHHHHh------CCCEEEEEECCCcccchhHHHHHhhhccCCcE-EEEeecccchhhhhhccCc----chhhhh
Confidence 699999999999 8999999999765321 1246799 9999999999999999985 678888
Q ss_pred eeecCCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCC
Q 037566 72 MFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNF 151 (360)
Q Consensus 72 A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~ 151 (360)
++.. ....|..++.+++++|.++ +..++++.||..++.. .+..+.. |..
T Consensus 83 ~~~~------~~~~~~~~~~~~l~~a~~~-----~~~~~v~~Ss~g~~~~------------------~~~~~~~--~~~ 131 (312)
T d1qyda_ 83 LAGG------VLSHHILEQLKLVEAIKEA-----GNIKRFLPSEFGMDPD------------------IMEHALQ--PGS 131 (312)
T ss_dssp CCCS------SSSTTTTTHHHHHHHHHHS-----CCCSEEECSCCSSCTT------------------SCCCCCS--STT
T ss_pred hhhc------ccccchhhhhHHHHHHHHh-----cCCcEEEEeeccccCC------------------Ccccccc--hhh
Confidence 7542 2346778889999999886 4556666676544321 1222222 233
Q ss_pred cHHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHH
Q 037566 152 YYAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAE 228 (360)
Q Consensus 152 ~Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~ 228 (360)
.|...+...+ ...+++++++||+.+||+.......... ... ..+..+.++|++. ..+++++++|+|+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~-----~~~--~~~~~~~~~~~g~---~~~~~i~v~Dva~ 201 (312)
T d1qyda_ 132 ITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDG-----HMM--PPRDKVLIYGDGN---VKGIWVDEDDVGT 201 (312)
T ss_dssp HHHHHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTC-----CSS--CCSSEECCBTTSC---SEEEEECHHHHHH
T ss_pred hhhHHHHHHHHhhcccccceEEeccceeecCCccchhhHHH-----Hhh--hcccccccccccc---cccceeeHHHHHH
Confidence 3444444333 4568999999999999986543222110 000 1234455667765 5678999999999
Q ss_pred HHHHHHcCCCCCCCc-eeccCCCcccHHHHHHHHHHHhCCCccC
Q 037566 229 QQIWAATTDRAKNQA-FNCTNGDVFTWKSLWKLLSEIFDVEFVP 271 (360)
Q Consensus 229 a~~~a~~~~~~~g~~-yni~~g~~~s~~el~~~ia~~~g~~~~~ 271 (360)
+++.++.++...|+. ||+++++.+|++|+++.+++.+|.+.+.
T Consensus 202 a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~ 245 (312)
T d1qyda_ 202 YTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDK 245 (312)
T ss_dssp HHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred HHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeE
Confidence 999998887777765 6777788999999999999999987653
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=2e-20 Score=162.03 Aligned_cols=185 Identities=11% Similarity=0.018 Sum_probs=134.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCCCh
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSE 79 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~~~ 79 (360)
+||++|+++|++ +||+|++++|++.... ....+++ ++.||++|.+++.++++++ |.|||+++....
T Consensus 14 ~iG~~v~~~Ll~------~g~~V~~~~R~~~~~~~~~~~~~~-~~~gD~~d~~~l~~al~~~----d~vi~~~g~~~~-- 80 (205)
T d1hdoa_ 14 QTGLTTLAQAVQ------AGYEVTVLVRDSSRLPSEGPRPAH-VVVGDVLQAADVDKTVAGQ----DAVIVLLGTRND-- 80 (205)
T ss_dssp HHHHHHHHHHHH------TTCEEEEEESCGGGSCSSSCCCSE-EEESCTTSHHHHHHHHTTC----SEEEECCCCTTC--
T ss_pred HHHHHHHHHHHH------CcCEEEEEEcChhhcccccccccc-cccccccchhhHHHHhcCC----CEEEEEeccCCc--
Confidence 489999999999 8999999999875431 2346799 9999999999999999985 789999875322
Q ss_pred hHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 037566 80 EINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIA 159 (360)
Q Consensus 80 ~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l 159 (360)
....++|..+++|++++++++ +++|||++||..+|+.+ +..+ .....|..+|..
T Consensus 81 ~~~~~~~~~~~~~l~~aa~~~-----~v~r~i~~ss~~~~~~~------------------~~~~---~~~~~~~~~~~~ 134 (205)
T d1hdoa_ 81 LSPTTVMSEGARNIVAAMKAH-----GVDKVVACTSAFLLWDP------------------TKVP---PRLQAVTDDHIR 134 (205)
T ss_dssp CSCCCHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCT------------------TCSC---GGGHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHhc-----CCCeEEEEeeeeccCCC------------------cccc---ccccccchHHHH
Confidence 233467889999999999998 89999999998877532 1111 112234444544
Q ss_pred Hh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcC
Q 037566 160 AS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATT 236 (360)
Q Consensus 160 ~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~ 236 (360)
+| +..+++|+|+||+.+++...... ..+...|. ....+++..|+|++++.++++
T Consensus 135 ~e~~l~~~~~~~tiirp~~~~~~~~~~~------------------~~~~~~~~-----~~~~~i~~~DvA~~~~~~l~~ 191 (205)
T d1hdoa_ 135 MHKVLRESGLKYVAVMPPHIGDQPLTGA------------------YTVTLDGR-----GPSRVISKHDLGHFMLRCLTT 191 (205)
T ss_dssp HHHHHHHTCSEEEEECCSEEECCCCCSC------------------CEEESSSC-----SSCSEEEHHHHHHHHHHTTSC
T ss_pred HHHHHHhcCCceEEEecceecCCCCccc------------------EEEeeCCC-----CCCCcCCHHHHHHHHHHHhCC
Confidence 44 45799999999999986322111 01111222 223567899999999999988
Q ss_pred CCCCCCceecc
Q 037566 237 DRAKNQAFNCT 247 (360)
Q Consensus 237 ~~~~g~~yni~ 247 (360)
+...|+.+.++
T Consensus 192 ~~~~g~~~~~s 202 (205)
T d1hdoa_ 192 DEYDGHSTYPS 202 (205)
T ss_dssp STTTTCEEEEE
T ss_pred CCCCCEEEecC
Confidence 87778888775
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.83 E-value=4.8e-21 Score=168.23 Aligned_cols=210 Identities=17% Similarity=0.067 Sum_probs=144.5
Q ss_pred CchHHHHHHHhcCCCCCCCCcE--EEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC-
Q 037566 1 MAGLSLAEALKNNPTIPGGPWK--VYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK- 77 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~--V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~- 77 (360)
+||++|+++|++ +||+ |++++|++........+++ ++.+|++|.+++.++++++ |+|+|+|+....
T Consensus 14 ~iG~~l~~~Ll~------~g~~v~v~~~~R~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~----d~vi~~a~~~~~~ 82 (252)
T d2q46a1 14 RTGQIVYKKLKE------GSDKFVAKGLVRSAQGKEKIGGEAD-VFIGDITDADSINPAFQGI----DALVILTSAVPKM 82 (252)
T ss_dssp TTHHHHHHHHHH------TTTTCEEEEEESCHHHHHHTTCCTT-EEECCTTSHHHHHHHHTTC----SEEEECCCCCCEE
T ss_pred HHHHHHHHHHHH------CCCcEEEEEEcCCHHHHHhccCCcE-EEEeeeccccccccccccc----eeeEEEEeecccc
Confidence 699999999999 7865 7777887543211245789 9999999999999999984 789999873210
Q ss_pred -----------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 78 -----------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 78 -----------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
......++|+.|+.++++.+... ..+++.+.|+..++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~~~------------------- 138 (252)
T d2q46a1 83 KPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVKHIVVVGSMGGTNP------------------- 138 (252)
T ss_dssp CTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCSEEEEEEETTTTCT-------------------
T ss_pred ccccchhhhhhcccccccchhhhccccccceeeccccccc-----cccccccccccccCCC-------------------
Confidence 23346789999999999999876 6788888877654431
Q ss_pred CCCCCCCCCCCcHHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccc
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHF 217 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 217 (360)
..+....+...|..++.+.+ ...+++++++||+++|||.+.. .... . .... .. + ...
T Consensus 139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~----------~-~~~~-~~-~-----~~~ 198 (252)
T d2q46a1 139 -DHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV-RELL----------V-GKDD-EL-L-----QTD 198 (252)
T ss_dssp -TCGGGGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTS-SCEE----------E-ESTT-GG-G-----GSS
T ss_pred -CcccccccccchhhhhhhhhhhhhcccccceeecceEEECCCcch-hhhh----------h-ccCc-cc-c-----cCC
Confidence 11111112334555555544 4578999999999999997532 1110 0 0011 01 1 122
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCceeccCCC---cccHHHHHHHHHHHh
Q 037566 218 CDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGD---VFTWKSLWKLLSEIF 265 (360)
Q Consensus 218 ~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~---~~s~~el~~~ia~~~ 265 (360)
..+++++|+|++++.++.++.+.|++|||+++. ..+++|+.+.+++..
T Consensus 199 ~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 199 TKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp CCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred CCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 457889999999999998888889999998643 455666666555443
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=3.7e-20 Score=163.42 Aligned_cols=190 Identities=14% Similarity=0.035 Sum_probs=136.5
Q ss_pred CchHHHHHHHhcCCCCCCCCc--EEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecC-
Q 037566 1 MAGLSLAEALKNNPTIPGGPW--KVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRL- 76 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~--~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~- 76 (360)
+||++|+++|++ +|+ +|++++|++.... .....++ +..+|+.+.+++.++++++ |+|||+|+...
T Consensus 25 ~iG~~l~~~Ll~------~g~~~~v~~~~R~~~~~~~~~~~~i~-~~~~D~~~~~~~~~~~~~~----d~vi~~~~~~~~ 93 (232)
T d2bkaa1 25 ETGRVLLKEILE------QGLFSKVTLIGRRKLTFDEEAYKNVN-QEVVDFEKLDDYASAFQGH----DVGFCCLGTTRG 93 (232)
T ss_dssp HHHHHHHHHHHH------HTCCSEEEEEESSCCCCCSGGGGGCE-EEECCGGGGGGGGGGGSSC----SEEEECCCCCHH
T ss_pred HHHHHHHHHHHh------CCCCCEEEEEecChhhhcccccceee-eeeeccccccccccccccc----cccccccccccc
Confidence 589999999999 774 8999999876532 1235677 8889999999999998884 79999988532
Q ss_pred -CChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 77 -KSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 77 -~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
.+..++.++|+.++.+++++|.+. ++++|||+||..+|+. +.+.|+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~a~~~-----~v~~fi~~Ss~~~~~~---------------------------~~~~Y~~ 141 (232)
T d2bkaa1 94 KAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS---------------------------SNFLYLQ 141 (232)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT---------------------------CSSHHHH
T ss_pred ccchhhhhhhcccccceeeeccccc-----CccccccCCccccccC---------------------------ccchhHH
Confidence 356678899999999999999886 7999999998765531 1345898
Q ss_pred HHHHHh---cCCCCc-EEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHH
Q 037566 156 EDIAAS---YSPAVT-YSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQI 231 (360)
Q Consensus 156 ek~l~e---~~~~~~-~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~ 231 (360)
+|..+| ...+++ ++|+||+.+||+++.. +....+ . .+..+ . +++.. .....++++|+|++++
T Consensus 142 ~K~~~E~~l~~~~~~~~~IlRP~~i~G~~~~~--~~~~~~--~---~~~~~-~--~~~~~----~~~~~I~~~dvA~a~i 207 (232)
T d2bkaa1 142 VKGEVEAKVEELKFDRYSVFRPGVLLCDRQES--RPGEWL--V---RKFFG-S--LPDSW----ASGHSVPVVTVVRAML 207 (232)
T ss_dssp HHHHHHHHHHTTCCSEEEEEECCEEECTTGGG--SHHHHH--H---HHHHC-S--CCTTG----GGGTEEEHHHHHHHHH
T ss_pred HHHHhhhccccccccceEEecCceeecCCCcC--cHHHHH--H---HHHhh-c--cCCcc----cCCCeEEHHHHHHHHH
Confidence 898888 455664 8999999999986532 211111 1 11111 1 12221 1224578999999999
Q ss_pred HHHcCCCCCCCceeccC
Q 037566 232 WAATTDRAKNQAFNCTN 248 (360)
Q Consensus 232 ~a~~~~~~~g~~yni~~ 248 (360)
.++..+. .++.|.+.+
T Consensus 208 ~~~~~~~-~~~~~i~~~ 223 (232)
T d2bkaa1 208 NNVVRPR-DKQMELLEN 223 (232)
T ss_dssp HHHTSCC-CSSEEEEEH
T ss_pred HHHhcCc-cCCeEEEcH
Confidence 9887653 456676653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.81 E-value=1.8e-20 Score=169.91 Aligned_cols=212 Identities=12% Similarity=0.042 Sum_probs=151.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----------CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEE
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----------FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFW 70 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h 70 (360)
+||++|+++|++ +||+|++++|++.... +...+++ ++.+|+.+...+.++++++ +.|+|
T Consensus 14 ~iG~~l~~~L~~------~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~----~~vi~ 82 (307)
T d1qyca_ 14 YIGRHVAKASLD------LGHPTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDDHASLVEAVKNV----DVVIS 82 (307)
T ss_dssp TTHHHHHHHHHH------TTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTCHHHHHHHHHTC----SEEEE
T ss_pred HHHHHHHHHHHH------CCCeEEEEECCCccccchhHHHHHHhhccCCcE-EEEeecccchhhhhhhhhc----eeeee
Confidence 699999999999 8999999999865421 1235789 9999999999999999884 68888
Q ss_pred eeeecCCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCC
Q 037566 71 VMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPN 150 (360)
Q Consensus 71 ~A~~~~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~ 150 (360)
+++. .|+.++.++++++..+ +++++++.||...+. ++..+.. +.
T Consensus 83 ~~~~----------~~~~~~~~~~~a~~~~-----~~~~~~~~s~~~~~~-------------------~~~~~~~--~~ 126 (307)
T d1qyca_ 83 TVGS----------LQIESQVNIIKAIKEV-----GTVKRFFPSEFGNDV-------------------DNVHAVE--PA 126 (307)
T ss_dssp CCCG----------GGSGGGHHHHHHHHHH-----CCCSEEECSCCSSCT-------------------TSCCCCT--TH
T ss_pred cccc----------cccchhhHHHHHHHHh-----ccccceeeecccccc-------------------ccccccc--cc
Confidence 8753 3455667888999887 678888887643221 1222111 12
Q ss_pred CcHHHHHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHH
Q 037566 151 FYYAVEDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLA 227 (360)
Q Consensus 151 ~~Y~~ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla 227 (360)
..+...+...+ ...+++++++||+++||++......... ....+....++|++. ..+++++++|+|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~---~~~~~i~v~Dva 195 (307)
T d1qyca_ 127 KSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGL--------TAPPRDKVVILGDGN---ARVVFVKEEDIG 195 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTC--------SSCCSSEEEEETTSC---CEEEEECHHHHH
T ss_pred cccccccccccchhhccCCCceecccceecCCCccchhhhhh--------hhhhcccceeeeccc---ccccCCcHHHHH
Confidence 22332222222 3468999999999999987644322210 001234455667665 567999999999
Q ss_pred HHHHHHHcCCCCCCC-ceeccCCCcccHHHHHHHHHHHhCCCcc
Q 037566 228 EQQIWAATTDRAKNQ-AFNCTNGDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 228 ~a~~~a~~~~~~~g~-~yni~~g~~~s~~el~~~ia~~~g~~~~ 270 (360)
++++.++.++...|+ +||+++++.+|+.|+++.+++.+|.+..
T Consensus 196 ~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~ 239 (307)
T d1qyca_ 196 TFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE 239 (307)
T ss_dssp HHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred HHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCc
Confidence 999988877766655 5777889999999999999999998754
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.73 E-value=9e-18 Score=145.54 Aligned_cols=173 Identities=14% Similarity=0.111 Sum_probs=117.9
Q ss_pred CchHHHHHHHhcCCCCCCCCc--EEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec---
Q 037566 1 MAGLSLAEALKNNPTIPGGPW--KVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR--- 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~--~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~--- 75 (360)
+||++|+++|++ +|+ +|+++.|++... .+.++ .++.|..++.+.+.+ .+|+|||+++..
T Consensus 13 ~iG~~lv~~L~~------~~~~~~v~~~~r~~~~~---~~~~~----~~~~d~~~~~~~~~~---~~d~vi~~~g~~~~~ 76 (212)
T d2a35a1 13 LTGEHLLDRILS------EPTLAKVIAPARKALAE---HPRLD----NPVGPLAELLPQLDG---SIDTAFCCLGTTIKE 76 (212)
T ss_dssp HHHHHHHHHHHH------CTTCCEEECCBSSCCCC---CTTEE----CCBSCHHHHGGGCCS---CCSEEEECCCCCHHH
T ss_pred HHHHHHHHHHHh------CCCeEEEEEEeCCchhh---ccccc----ccccchhhhhhcccc---chheeeeeeeeeccc
Confidence 589999999999 787 688888876442 23344 344444444333333 268999998743
Q ss_pred CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 76 LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 76 ~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
..+...+.++|+.++.+++++|++. ++++|+++||..+|+. +.++|..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~a~~~-----~v~~~i~~Ss~~~~~~---------------------------~~~~y~~ 124 (212)
T d2a35a1 77 AGSEEAFRAVDFDLPLAVGKRALEM-----GARHYLVVSALGADAK---------------------------SSIFYNR 124 (212)
T ss_dssp HSSHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT---------------------------CSSHHHH
T ss_pred cccccccccchhhhhhhcccccccc-----cccccccccccccccc---------------------------cccchhH
Confidence 2356788999999999999999987 8999999998765531 2346899
Q ss_pred HHHHHh---cCCCC-cEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHH
Q 037566 156 EDIAAS---YSPAV-TYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQI 231 (360)
Q Consensus 156 ek~l~e---~~~~~-~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~ 231 (360)
+|..+| ...++ .++|+||+.||||.+....... ...++.....+ . ...++++|+|++++
T Consensus 125 ~K~~~E~~l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~------------~~~~~~~~~~~-~----~~~i~v~DvA~ai~ 187 (212)
T d2a35a1 125 VKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEI------------LAAPIARILPG-K----YHGIEACDLARALW 187 (212)
T ss_dssp HHHHHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGG------------TTCCCC----C-H----HHHHHHHHHHHHHH
T ss_pred HHHHHhhhccccccccceeeCCcceeCCcccccHHHH------------HHHHHhhccCC-C----CcEEEHHHHHHHHH
Confidence 999888 45566 5999999999999764221110 01111111111 1 23589999999999
Q ss_pred HHHcCCC
Q 037566 232 WAATTDR 238 (360)
Q Consensus 232 ~a~~~~~ 238 (360)
.++.++.
T Consensus 188 ~~~~~~~ 194 (212)
T d2a35a1 188 RLALEEG 194 (212)
T ss_dssp HHHTCCC
T ss_pred HHHcCCC
Confidence 9887643
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.64 E-value=1.8e-16 Score=147.51 Aligned_cols=214 Identities=7% Similarity=-0.047 Sum_probs=137.7
Q ss_pred CchHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHH-HHHHHccCCCCccEEEEeeeec
Q 037566 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTD-TTQKLSSISQEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~-l~~~l~~~~~~v~~V~h~A~~~ 75 (360)
+||++|+++|++ +||+|++++|++.+. ....++++ ++.+|++|..+ +..+++++ +.+|+....
T Consensus 14 ~iG~~lv~~Ll~------~G~~V~~l~R~~~~~~~~~~~~~~~v~-~~~gD~~d~~~~~~~a~~~~----~~~~~~~~~- 81 (350)
T d1xgka_ 14 RQGASLIRVAAA------VGHHVRAQVHSLKGLIAEELQAIPNVT-LFQGPLLNNVPLMDTLFEGA----HLAFINTTS- 81 (350)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEESCSCSHHHHHHHTSTTEE-EEESCCTTCHHHHHHHHTTC----SEEEECCCS-
T ss_pred HHHHHHHHHHHh------CCCeEEEEECCcchhhhhhhcccCCCE-EEEeeCCCcHHHHHHHhcCC----ceEEeeccc-
Confidence 489999999999 899999999986542 11346899 99999999765 56677774 455544221
Q ss_pred CCChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHH
Q 037566 76 LKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAV 155 (360)
Q Consensus 76 ~~~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ 155 (360)
....|+.++.|+++||.++ +++++++.||...+... .+ . +...|..
T Consensus 82 ------~~~~~~~~~~~~~~aa~~a-----gv~~~v~~Ss~~~~~~~--------------~~----~-----~~~~~~~ 127 (350)
T d1xgka_ 82 ------QAGDEIAIGKDLADAAKRA-----GTIQHYIYSSMPDHSLY--------------GP----W-----PAVPMWA 127 (350)
T ss_dssp ------TTSCHHHHHHHHHHHHHHH-----SCCSEEEEEECCCGGGT--------------SS----C-----CCCTTTH
T ss_pred ------ccchhhhhhhHHHHHHHHh-----CCCceEEEeeccccccC--------------Cc----c-----cchhhhh
Confidence 1246788899999999987 77788877775433210 00 0 0111333
Q ss_pred HHHHHh---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcC-CCeeeeCCcccccccccccCH-HHHHHHH
Q 037566 156 EDIAAS---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQG-LPFRYLGNKYTWEHFCDMSDS-RVLAEQQ 230 (360)
Q Consensus 156 ek~l~e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~~~~~~~~d~~~v-~dla~a~ 230 (360)
+|...+ ...+++++++||+..++............. . ...+ ..+..++++. ....++++ +|+++++
T Consensus 128 ~k~~~~~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~---~~~~~i~~~~Dva~~v 198 (350)
T d1xgka_ 128 PKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQME-----L-MPDGTFEWHAPFDPD---IPLPWLDAEHDVGPAL 198 (350)
T ss_dssp HHHHHHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEE-----E-CTTSCEEEEESSCTT---SCEEEECHHHHHHHHH
T ss_pred hHHHHHHHHHhhccCceeeeeceeecccccccccccccc-----c-cccccceeeecccCC---CcceEEEeHHHHHHHH
Confidence 444443 456899999999988875322111100000 0 0011 1223344333 22345554 7899888
Q ss_pred HHHHcCC--CCCCCceeccCCCcccHHHHHHHHHHHhCCCcc
Q 037566 231 IWAATTD--RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFV 270 (360)
Q Consensus 231 ~~a~~~~--~~~g~~yni~~g~~~s~~el~~~ia~~~g~~~~ 270 (360)
..++.++ ...|++|++++ +.+|++|+++.+++.+|.+..
T Consensus 199 ~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~ 239 (350)
T d1xgka_ 199 LQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVT 239 (350)
T ss_dssp HHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred HHHHhCChhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcce
Confidence 8776543 23589999975 679999999999999998764
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.16 E-value=2.3e-10 Score=100.37 Aligned_cols=196 Identities=9% Similarity=0.019 Sum_probs=128.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~ 75 (360)
||..++++|++ +|++|++.+|+.... .....+++ ++.+|++|+++++++++.+ . .+|+++|.|+..
T Consensus 17 IG~aia~~l~~------~G~~V~~~~r~~~~l~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iDilVnnAG~~ 88 (242)
T d1ulsa_ 17 IGRATLELFAK------EGARLVACDIEEGPLREAAEAVGAH-PVVMDVADPASVERGFAEALAHLG-RLDGVVHYAGIT 88 (242)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHTTTCE-EEECCTTCHHHHHHHHHHHHHHHS-SCCEEEECCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHcCCe-EEEEecCCHHHHHHHHHHHHHhcC-CceEEEECCccc
Confidence 79999999999 999999999975331 01234678 9999999999988776543 2 289999999853
Q ss_pred CC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 76 LK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 76 ~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
.. +.+..+++|+.|+.++.+++.+.++.. +-.+++.+||+...+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~~~i~~~ss~~~~~~------------------------- 142 (242)
T d1ulsa_ 89 RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTASRVYLGN------------------------- 142 (242)
T ss_dssp CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECCGGGGCC-------------------------
T ss_pred ccCchhhCcchhhhccccccchhhhhhhhhcccccccc-ccceeeeeccccccCC-------------------------
Confidence 22 345678999999999999988766533 3456777666432211
Q ss_pred CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 147 PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
| ....|+.+|..-+ ..+|+.+..+.|+.|--+-........ ...+. ...|+.
T Consensus 143 ~-~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~-----~~~~~--~~~pl~---------- 204 (242)
T d1ulsa_ 143 L-GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKV-----REKAI--AATPLG---------- 204 (242)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHH-----HHHHH--HTCTTC----------
T ss_pred C-CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHH-----HHHHH--hcCCCC----------
Confidence 1 1234877664322 456899999999988655322211111 11111 122321
Q ss_pred cccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 217 FCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
-+...+|+|+++++++... -..|+++.|.+|-.
T Consensus 205 --R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 205 --RAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (242)
T ss_dssp --SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred --CCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence 1345778999988887432 23589988866653
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.15 E-value=1.6e-10 Score=101.07 Aligned_cols=191 Identities=18% Similarity=0.130 Sum_probs=124.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~~ 77 (360)
||..++++|++ +|++|++.+|+... ...+. .+.+|++|+++++++++.+ . ++|.++|.|+....
T Consensus 19 IG~aia~~la~------~Ga~V~~~~r~~~~----~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iDiLVnnAG~~~~ 86 (237)
T d1uzma1 19 IGLAIAQRLAA------DGHKVAVTHRGSGA----PKGLF-GVEVDVTDSDAVDRAFTAVEEHQG-PVEVLVSNAGLSAD 86 (237)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSSCC----CTTSE-EEECCTTCHHHHHHHHHHHHHHHS-SCSEEEEECSCCC-
T ss_pred HHHHHHHHHHH------CCCEEEEEECCcch----hcCce-EEEEecCCHHHHHHHHHHHHHhcC-CceEEEeeeccccc
Confidence 79999999999 99999999998654 24567 8999999999887776533 2 28999999985321
Q ss_pred ---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCC
Q 037566 78 ---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPF 148 (360)
Q Consensus 78 ---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~ 148 (360)
+.+..+++|+.++..+.+++...++.. +-.++|++||...+.. . +
T Consensus 87 ~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Iv~isS~~~~~~-----------------~-------~- 140 (237)
T d1uzma1 87 AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSVSGLWG-----------------I-------G- 140 (237)
T ss_dssp ----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCCC------------------------------
T ss_pred ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-CCCceEEEcchhhccC-----------------C-------c-
Confidence 345678999999999988876544422 4468999998653311 0 1
Q ss_pred CCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccc
Q 037566 149 PNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFC 218 (360)
Q Consensus 149 p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 218 (360)
....|+.+|...+ ..+|+.+..+.|+.|.-+........ ...... ...|+ |
T Consensus 141 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~-----~~~~~~--~~~pl---~--------- 201 (237)
T d1uzma1 141 NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDER-----IQQGAL--QFIPA---K--------- 201 (237)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHH-----HHHHHG--GGCTT---C---------
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHH-----HHHHHH--hcCCC---C---------
Confidence 1234877665322 45789999999988854311000000 000110 11121 1
Q ss_pred cccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 219 DMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 219 d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
-+...+|+|+++++++... -..|+++.|.+|
T Consensus 202 R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG 234 (237)
T d1uzma1 202 RVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 234 (237)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 2456888999998887432 235899888666
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=2e-10 Score=100.87 Aligned_cols=198 Identities=12% Similarity=0.092 Sum_probs=127.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC---CCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW---FPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~---~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~- 77 (360)
||.+++++|++ +|++|++.+|+..... .+..+++ .+.+|++|+++++++++.+.. +|+++|.|+....
T Consensus 19 IG~aia~~la~------~G~~V~~~~r~~~~l~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~g~-iDilVnnAg~~~~~ 90 (244)
T d1pr9a_ 19 IGRGTVQALHA------TGARVVAVSRTQADLDSLVRECPGIE-PVCVDLGDWEATERALGSVGP-VDLLVNNAAVALLQ 90 (244)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHTTCCC-CCEEEECCCCCCCB
T ss_pred HHHHHHHHHHH------cCCEEEEEECCHHHHHHHHHhcCCCe-EEEEeCCCHHHHHHHHHHhCC-ceEEEecccccccc
Confidence 79999999999 9999999999754310 0124678 899999999999999998875 9999999985321
Q ss_pred --------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 78 --------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 78 --------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
+.+..+++|+.++.++.+++.+.+....+-.++|++||...... .| .
T Consensus 91 ~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~------------------------~~-~ 145 (244)
T d1pr9a_ 91 PFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA------------------------VT-N 145 (244)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC------------------------CT-T
T ss_pred chhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc------------------------cc-c
Confidence 34457899999999999887653210123468999988643211 01 1
Q ss_pred CCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 150 NFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 150 ~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
...|+.+|..-+ ...++.+..+.|+.|.-|.......... ....+. ...|+ | -
T Consensus 146 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~---~~~~~~--~~~pl---~---------R 208 (244)
T d1pr9a_ 146 HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH---KAKTML--NRIPL---G---------K 208 (244)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHH---HHHHHH--TTCTT---C---------S
T ss_pred hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChH---HHHHHH--hcCCC---C---------C
Confidence 334776664322 4568999999998886542111111000 011111 12222 1 1
Q ss_pred ccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 220 MSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
+...+|+|+++++++... -..|+++.|.+|
T Consensus 209 ~~~peevA~~v~fL~S~~a~~itG~~i~vDGG 240 (244)
T d1pr9a_ 209 FAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhCCcCCcEEEECcc
Confidence 345788999988877432 235888888555
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.08 E-value=1.7e-10 Score=101.63 Aligned_cols=204 Identities=9% Similarity=-0.033 Sum_probs=127.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeeecC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQRL 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~~~ 76 (360)
||.+++++|++ +|++|++.+|+..... .+..+.. ++.+|++|+++++++++.+ . ++|.++|.|+...
T Consensus 17 IG~aia~~la~------~G~~V~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G-~iDiLVnnAG~~~ 88 (248)
T d2d1ya1 17 IGRAIAQAFAR------EGALVALCDLRPEGKEVAEAIGGA-FFQVDLEDERERVRFVEEAAYALG-RVDVLVNNAAIAA 88 (248)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSTTHHHHHHHHTCE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHcCCe-EEEEeCCCHHHHHHHHHHHHHhcC-CCCeEEEeCcCCC
Confidence 79999999999 9999999999754310 0122457 8999999999887776543 3 2899999998532
Q ss_pred C---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCC
Q 037566 77 K---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP 147 (360)
Q Consensus 77 ~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p 147 (360)
. +.+..+++|+.|+.++.+++...|+.. +-.++|++||...+.. .|
T Consensus 89 ~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Ii~isS~~~~~~------------------------~~ 143 (248)
T d2d1ya1 89 PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASVQGLFA------------------------EQ 143 (248)
T ss_dssp CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCGGGTSB------------------------CT
T ss_pred CCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-cccccccccccccccc------------------------cc
Confidence 2 234578999999999999998766523 3468999988754321 01
Q ss_pred CCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchh-HHHHHHHHHHHhhcCCCeeeeCCcccccc
Q 037566 148 FPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNS-LLTLAVYATICRHQGLPFRYLGNKYTWEH 216 (360)
Q Consensus 148 ~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 216 (360)
....|+.+|...+ ..+|+.+..+.|+.|--|........ ..+-.....+. ...|
T Consensus 144 -~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~p------------ 208 (248)
T d2d1ya1 144 -ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE--DLHA------------ 208 (248)
T ss_dssp -TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHH--TTST------------
T ss_pred -ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHH--hcCC------------
Confidence 1345877664322 45689999999987743210000000 00000000000 0111
Q ss_pred cccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 217 FCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 217 ~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
+.-+...+|+|+++.+++... -..|+++.|.+|-.-|
T Consensus 209 l~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~tas 247 (248)
T d2d1ya1 209 LRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTAS 247 (248)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcccc
Confidence 112456888999988887432 2458999887765444
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.07 E-value=3e-10 Score=100.73 Aligned_cols=201 Identities=12% Similarity=0.030 Sum_probs=127.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||.+++++|++ +|++|++.+|+.... .....++. .+.+|++|+++++++++.+ . ++|+++
T Consensus 19 IG~aia~~la~------~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~-~~~~Dvt~~~~v~~~~~~~~~~~G-~iDiLV 90 (261)
T d1geea_ 19 LGKSMAIRFAT------EKAKVVVNYRSKEDEANSVLEEIKKVGGEAI-AVKGDVTVESDVINLVQSAIKEFG-KLDVMI 90 (261)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCEEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHhC-CCCEee
Confidence 79999999999 999999999975321 01234677 8999999999887776532 2 289999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|.|+.... +....+++|+.|+.++.+++...|+....-.+||++||...+. +
T Consensus 91 nnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~-----------------~-- 151 (261)
T d1geea_ 91 NNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------------P-- 151 (261)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------------C--
T ss_pred ccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc-----------------c--
Confidence 99985322 2346789999999999998876554232345688888764321 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.| ....|+.+|...+ ..+|+.+..+.|+.|--|.... ....-.....+. ...|+ |
T Consensus 152 -----~~-~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~--~~~pl---~- 216 (261)
T d1geea_ 152 -----WP-LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE---KFADPEQRADVE--SMIPM---G- 216 (261)
T ss_dssp -----CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH---HHHSHHHHHHHH--TTCTT---S-
T ss_pred -----Cc-cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhh---hcCCHHHHHHHH--hcCCC---C-
Confidence 01 1234877664322 4578999999999885432110 000000111111 12222 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
-+...+|+|+++++++... -..|+++.|.+|-.+
T Consensus 217 --------R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl 252 (261)
T d1geea_ 217 --------YIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL 252 (261)
T ss_dssp --------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred --------CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence 1345788999988887432 235899988777543
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.07 E-value=1.7e-10 Score=101.30 Aligned_cols=191 Identities=10% Similarity=0.006 Sum_probs=125.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++.+|++.... ....++. ++.+|++|+++++++++.+ . .+|.++|.|+
T Consensus 18 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~idilinnAG 89 (244)
T d1nffa_ 18 MGASHVRAMVA------EGAKVVFGDILDEEGKAMAAELADAAR-YVHLDVTQPAQWKAAVDTAVTAFG-GLHVLVNNAG 89 (244)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHTGGGEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhhCcce-EEEeecCCHHHHHHHHHHHHHHhC-CCeEEEECCc
Confidence 79999999999 9999999999753210 0134677 8999999999887776533 3 2899999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++.+++...|+.. +-.++|++||...+.. .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~~-----------------~----- 146 (244)
T d1nffa_ 90 ILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLAG-----------------T----- 146 (244)
T ss_dssp CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC-----------------C-----
T ss_pred ccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-CcceEEeccccccccc-----------------c-----
Confidence 5321 345678999999999999876554322 2358999988753311 0
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
| ....|+.+|...+ ...|+.+..+-|+.|--|....... .....|+
T Consensus 147 --~-~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~------------~~~~~pl--------- 202 (244)
T d1nffa_ 147 --V-ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE------------DIFQTAL--------- 202 (244)
T ss_dssp --T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT------------TCSCCSS---------
T ss_pred --c-cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH------------HHHhccc---------
Confidence 1 1234777664322 4578999999998775432111000 0011111
Q ss_pred cccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
.-+...+|+|+++++++... -..|+++.|.+|-
T Consensus 203 ---~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~ 237 (244)
T d1nffa_ 203 ---GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT 237 (244)
T ss_dssp ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ---cCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCe
Confidence 12456889999998887432 2358999886664
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.07 E-value=8.7e-10 Score=98.05 Aligned_cols=203 Identities=8% Similarity=-0.025 Sum_probs=128.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||..++++|++ +|++|++.+|+.... ......+. ++.+|++|+++++++++.+ . .+|+++|.
T Consensus 18 IG~aia~~la~------~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~lVnn 89 (268)
T d2bgka1 18 IGETTAKLFVR------YGAKVVIADIADDHGQKVCNNIGSPDVIS-FVHCDVTKDEDVRNLVDTTIAKHG-KLDIMFGN 89 (268)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCCTTTEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEEC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhcCCCceE-EEEccCCCHHHHHHHHHHHHHHcC-Ccceeccc
Confidence 79999999999 999999999875321 11234577 8999999999988776532 2 28999999
Q ss_pred eeecCC-----------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 72 MFQRLK-----------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 72 A~~~~~-----------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|+.... +.+..+++|+.|+.++.+++...|+.. +-.++|++||...+-..
T Consensus 90 AG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~ii~iss~~~~~~~------------------ 150 (268)
T d2bgka1 90 VGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASISSFTAG------------------ 150 (268)
T ss_dssp CCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECCGGGTCCC------------------
T ss_pred cccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-CCCCccccccccccccc------------------
Confidence 984211 234567999999999999987655422 33578888776433110
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+....+|+.+|...+ ...|+.+..+.|+.|-.|........-.. ......+....+ .|
T Consensus 151 ------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~--~~~~~~~~~~~~---~g- 218 (268)
T d2bgka1 151 ------EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS--RVEELAHQAANL---KG- 218 (268)
T ss_dssp ------TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHH--HHHHHHHHTCSS---CS-
T ss_pred ------cccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHH--HHHHHHHhcccc---CC-
Confidence 001235877664322 45789999999998877643222111000 001111111111 12
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
-+...+|+|+++++++... -..|+++.|.+|-.
T Consensus 219 --------r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t 253 (268)
T d2bgka1 219 --------TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT 253 (268)
T ss_dssp --------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred --------CCcCHHHHHHHHHHHhChhhCCccCceEEECcCcc
Confidence 1345889999999887432 24589998876643
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.06 E-value=2.9e-10 Score=99.64 Aligned_cols=198 Identities=12% Similarity=0.086 Sum_probs=126.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~- 77 (360)
||++++++|++ +|++|++.+|+.... ..+..+++ .+.+|++|+++++++++.+.. +|+++|.|+....
T Consensus 17 IG~aia~~la~------~Ga~V~~~~r~~~~l~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~g~-iDilVnnAg~~~~~ 88 (242)
T d1cyda_ 17 IGRDTVKALHA------SGAKVVAVTRTNSDLVSLAKECPGIE-PVCVDLGDWDATEKALGGIGP-VDLLVNNAALVIMQ 88 (242)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHTTCCC-CSEEEECCCCCCCB
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHhcCCCe-EEEEeCCCHHHHHHHHHHcCC-CeEEEECCccccch
Confidence 79999999999 999999999975331 00124688 999999999999999998874 9999999985321
Q ss_pred --------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCC
Q 037566 78 --------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFP 149 (360)
Q Consensus 78 --------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p 149 (360)
+.+..+++|+.|+..+.+++...+....+-.++|++||...+.. .| .
T Consensus 89 ~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~------------------------~~-~ 143 (242)
T d1cyda_ 89 PFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT------------------------FP-N 143 (242)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC------------------------CT-T
T ss_pred hHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc------------------------CC-c
Confidence 24457899999999999877543210113357899888643221 01 1
Q ss_pred CCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 150 NFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 150 ~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
...|+.+|..-+ ...|+.+..+-|+.|--|........- .....+.. ..|+ | -
T Consensus 144 ~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~---~~~~~~~~--~~pl---~---------R 206 (242)
T d1cyda_ 144 LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADP---EFARKLKE--RHPL---R---------K 206 (242)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCH---HHHHHHHH--HSTT---S---------S
T ss_pred cccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCH---HHHHHHHh--cCCC---C---------C
Confidence 234877664332 456899999999877543110000000 01111111 1221 1 2
Q ss_pred ccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 220 MSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
+...+|+|+++++++... -..|+++.|.+|
T Consensus 207 ~~~peeva~~v~fL~S~~s~~itG~~i~vDGG 238 (242)
T d1cyda_ 207 FAEVEDVVNSILFLLSDRSASTSGGGILVDAG 238 (242)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhcCcCCceEEeCcc
Confidence 345788999988877432 235899888655
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.06 E-value=5.5e-10 Score=98.41 Aligned_cols=195 Identities=12% Similarity=0.088 Sum_probs=126.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||.+++++|++ +|++|++.+|+.... .....++. .+.+|++|++++.++++.+ .. +|+++|
T Consensus 22 IG~a~a~~la~------~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~-~~~~Dvt~~~~v~~~~~~~~~~~g~-iDilvn 93 (251)
T d2c07a1 22 IGREIAKMLAK------SVSHVICISRTQKSCDSVVDEIKSFGYESS-GYAGDVSKKEEISEVINKILTEHKN-VDILVN 93 (251)
T ss_dssp HHHHHHHHHTT------TSSEEEEEESSHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHHHHHHHHCSC-CCEEEE
T ss_pred HHHHHHHHHHH------cCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHhcCC-ceeeee
Confidence 79999999999 999999999974321 01234678 8999999999887776533 33 899999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
.|+.... +....+++|+.|+.++.+++...|+.. +-.+||++||...+..
T Consensus 94 nag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~~~~-------------------- 152 (251)
T d2c07a1 94 NAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSIVGLTG-------------------- 152 (251)
T ss_dssp CCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHC--------------------
T ss_pred ccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-CCeEEEEECCHHhcCC--------------------
Confidence 9985321 345678999999999999887654422 3468999998754321
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
.| ....|+.+|..-+ ...|+.+..+.|+.|--+........ ....+. ...|+ |
T Consensus 153 ----~~-~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~-----~~~~~~--~~~pl---~-- 215 (251)
T d2c07a1 153 ----NV-GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ-----IKKNII--SNIPA---G-- 215 (251)
T ss_dssp ----CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH-----HHHHHH--TTCTT---S--
T ss_pred ----CC-CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHH-----HHHHHH--hcCCC---C--
Confidence 01 1234877664332 45789999999998866532221111 111111 12232 1
Q ss_pred ccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
-+...+|+|+++++++... -..|+++.|.+|
T Consensus 216 -------R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 216 -------RMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp -------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -------CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 1345788999988877432 235898888655
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.05 E-value=5.2e-10 Score=98.54 Aligned_cols=196 Identities=14% Similarity=0.092 Sum_probs=125.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|++.+|+.... .....++. ++.+|++|++++.++++.+ . ++|+++|.
T Consensus 18 IG~aia~~la~------~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G-~iDiLVnn 89 (251)
T d1zk4a1 18 IGLAIATKFVE------EGAKVMITGRHSDVGEKAAKSVGTPDQIQ-FFQHDSSDEDGWTKLFDATEKAFG-PVSTLVNN 89 (251)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHCCTTTEE-EEECCTTCHHHHHHHHHHHHHHHS-SCCEEEEC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhCCCCcEE-EEEccCCCHHHHHHHHHHHHHHhC-CceEEEec
Confidence 79999999999 999999999975321 11235788 9999999999887766532 3 38999999
Q ss_pred eeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 72 MFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 72 A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
|+.... +....+++|+.|+.++.+++...|+....-.++|++||...+. +
T Consensus 90 Ag~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~-----------------~---- 148 (251)
T d1zk4a1 90 AGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV-----------------G---- 148 (251)
T ss_dssp CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS-----------------C----
T ss_pred cccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec-----------------c----
Confidence 985321 2345789999999999999877655332234789998864321 0
Q ss_pred CCCCCCCCCcHHHHHHHH---------h---cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhh-cCCCeeeeC
Q 037566 143 SLRLPFPNFYYAVEDIAA---------S---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRH-QGLPFRYLG 209 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~---------e---~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~G 209 (360)
.| ....|+.+|... | ..+|+.+..+.|+.|-.|........- ...+. ...|+ |
T Consensus 149 ---~~-~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~-------~~~~~~~~~pl---~ 214 (251)
T d1zk4a1 149 ---DP-SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE-------EAMSQRTKTPM---G 214 (251)
T ss_dssp ---CT-TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH-------HHHTSTTTCTT---S
T ss_pred ---CC-CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH-------HHHHHHhCCCC---C
Confidence 01 123477665322 2 256899999999888654211111100 00000 11121 1
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
-+...+|+|+++++++... -..|+++.|.+|
T Consensus 215 ---------R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 215 ---------HIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp ---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---------CCcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence 2456889999998887432 235899888655
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.05 E-value=5.3e-10 Score=98.24 Aligned_cols=198 Identities=13% Similarity=0.029 Sum_probs=123.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVM 72 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A 72 (360)
||..++++|++ +|++|++.+|++... .....++. .+.+|++|+++++++++.+ . ++|.++|.|
T Consensus 17 IG~aia~~la~------~Ga~V~~~~~~~~~~~~~~~~~~g~~~~-~~~~Dvs~~~~v~~~~~~~~~~~G-~iDilVnnA 88 (247)
T d2ew8a1 17 IGRAIAERFAV------EGADIAIADLVPAPEAEAAIRNLGRRVL-TVKCDVSQPGDVEAFGKQVISTFG-RCDILVNNA 88 (247)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCCHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCchHHHHHHHHHcCCcEE-EEEeeCCCHHHHHHHHHHHHHHcC-CCCEEEECC
Confidence 79999999999 999999999976431 01245688 8999999999887776532 2 389999999
Q ss_pred eecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCC
Q 037566 73 FQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDS 143 (360)
Q Consensus 73 ~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~ 143 (360)
+.... +.+..+++|+.|+.++.+++...|+.. +-.++|++||......
T Consensus 89 G~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Iv~isS~~~~~~---------------------- 145 (247)
T d2ew8a1 89 GIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYWLK---------------------- 145 (247)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSC----------------------
T ss_pred CCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-CCCCccccccchhccc----------------------
Confidence 85321 344678999999999999987655422 3468999988643210
Q ss_pred CCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccc
Q 037566 144 LRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 144 p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
.| ....|+.+|.... ...|+.+..+.|+.|--|........ ....... ....|+
T Consensus 146 --~~-~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~----~~~~~~~-~~~~~l-------- 209 (247)
T d2ew8a1 146 --IE-AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS----AMFDVLP-NMLQAI-------- 209 (247)
T ss_dssp --CS-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------------------CTTSSS--------
T ss_pred --Cc-ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc----hhHHHHH-HHhccC--------
Confidence 01 1234777664322 45689999999988865422110000 0000000 000111
Q ss_pred ccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
.-+...+|+|+++++++... -..|++..|.+|-
T Consensus 210 ----~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 210 ----PRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM 244 (247)
T ss_dssp ----CSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred ----CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCE
Confidence 11345788999988877422 2358998886663
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.02 E-value=4.3e-10 Score=99.10 Aligned_cols=199 Identities=10% Similarity=0.016 Sum_probs=126.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||+.++++|++ +|++|++.+|+.... . ....++. ++.+|++|+++++++++.+ . ++|+++
T Consensus 17 IG~aia~~la~------~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iDiLV 88 (251)
T d1vl8a_ 17 LGFGIAQGLAE------AGCSVVVASRNLEEASEAAQKLTEKYGVETM-AFRCDVSNYEEVKKLLEAVKEKFG-KLDTVV 88 (251)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHHCCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHHHhCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEEE
Confidence 79999999999 999999999975321 0 0134677 8999999999887776543 2 289999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|.|+.... +.+..+++|+.|+.++.+++...|+.. +-.++|++||...... +
T Consensus 89 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~i~S~~~~~~----------------~-- 149 (251)
T d1vl8a_ 89 NAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSLTVEEV----------------T-- 149 (251)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECCGGGTCC----------------C--
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-ccccccccccchhccc----------------c--
Confidence 99985321 334578999999999999988776533 3358999887542110 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.+ ....|+.+|...+ ..+|+.+..+.|+.|--+......... .....+. ...|+ |
T Consensus 150 -----~~-~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~--~~~pl---~- 214 (251)
T d1vl8a_ 150 -----MP-NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDP---EKLDYML--KRIPL---G- 214 (251)
T ss_dssp -----SS-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCH---HHHHHHH--HTCTT---S-
T ss_pred -----Cc-cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCH---HHHHHHH--hcCCC---C-
Confidence 01 1234877664322 457899999999888554221100000 0111111 12232 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
-+...+|+|+++++++... -..|+++.|.+|-
T Consensus 215 --------R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 215 --------RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp --------SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --------CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCe
Confidence 1234667888888876432 2358998886553
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=1.1e-10 Score=103.27 Aligned_cols=208 Identities=14% Similarity=0.080 Sum_probs=131.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||.+++++|++ +|++|++.+|+.... .....++. ++.+|++|+++++++++.+ . ++|.+
T Consensus 15 IG~aia~~la~------~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G-~iDil 86 (254)
T d2gdza1 15 IGRAFAEALLL------KGAKVALVDWNLEAGVQCKAALHEQFEPQKTL-FIQCDVADQQQLRDTFRKVVDHFG-RLDIL 86 (254)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHHhcCCCcEE-EEEeecCCHHHHHHHHHHHHHHcC-CcCee
Confidence 79999999999 999999999975320 11234677 8999999999887776532 2 28999
Q ss_pred EEeeeecC-CChhHhhhhhHHHHHHHHHHHHhhccCC--CCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 69 FWVMFQRL-KSEEINISNNSTMFKNVMSVVVDSNKGR--SRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 69 ~h~A~~~~-~~~~~~~~vNv~gt~nll~a~~~~~~~~--~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
+|.|+... .+.++.+++|+.++.++..++...|+.. ..-.+||++||...+- |
T Consensus 87 VnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~-----------------~------- 142 (254)
T d2gdza1 87 VNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-----------------P------- 142 (254)
T ss_dssp EECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------------C-------
T ss_pred cccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc-----------------C-------
Confidence 99999643 4778899999999998888887654311 1125699998864321 0
Q ss_pred CCCCCCcHHHHHH----------HH-h-cCCCCcEEEEcCCCeeecCCCCcchhHH---HHHHHHHHHhhcCCCeeeeCC
Q 037566 146 LPFPNFYYAVEDI----------AA-S-YSPAVTYSVHRSSIIIGASSRSLNNSLL---TLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 146 ~p~p~~~Y~~ek~----------l~-e-~~~~~~~~ilRp~~vyGp~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.| ....|+.+|. ++ | ...|+.+..+.|+.|--|--........ .......+.+ .++
T Consensus 143 ~~-~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~----~~p---- 213 (254)
T d2gdza1 143 VA-QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD----MIK---- 213 (254)
T ss_dssp CT-TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH----HHH----
T ss_pred CC-CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHh----cCC----
Confidence 01 1234776553 22 3 5678999999998774321000000000 0000000000 000
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCCcccHHH
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKS 256 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~~~s~~e 256 (360)
..-+...+|+|+++++++.++...|++..|.+|..+.|+|
T Consensus 214 ------~~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~~ 253 (254)
T d2gdza1 214 ------YYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD 253 (254)
T ss_dssp ------HHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred ------CCCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence 1123457889999999887655569999998888776543
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.00 E-value=2.4e-10 Score=100.26 Aligned_cols=196 Identities=18% Similarity=0.166 Sum_probs=127.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++.+|+..... ....++. .+.+|++|+++++++++. .. ++|.++|.|+
T Consensus 16 IG~a~a~~l~~------~G~~Vv~~~r~~~~l~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iDilVnnAg 87 (243)
T d1q7ba_ 16 IGRAIAETLAA------RGAKVIGTATSENGAQAISDYLGANGK-GLMLNVTDPASIESVLEKIRAEFG-EVDILVNNAG 87 (243)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHGGGEE-EEECCTTCHHHHHHHHHHHHHHTC-SCSEEEECCC
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHhCCCCc-EEEEEecCHHHhhhhhhhhhcccC-Ccceehhhhh
Confidence 79999999999 9999999999753210 0124577 899999999988776653 23 3899999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+..+.+++...|+.. +-.++|++||...+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~II~isS~~~~~~~---------------------- 144 (243)
T d1q7ba_ 88 ITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-RHGRIITIGSVVGTMGN---------------------- 144 (243)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCC----------------------
T ss_pred hccccccccccccccccccceeechhhhhHHHHHHHHHHc-CCCEeeeecchhhcCCC----------------------
Confidence 5321 344578999999999999997665422 23689999987543210
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
| ....|+.+|...+ ..+|+.+..+.|+.|--+........ ....+. ...|+ |
T Consensus 145 --~-~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~~~--~~~pl---~----- 206 (243)
T d1q7ba_ 145 --G-GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD-----QRAGIL--AQVPA---G----- 206 (243)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH-----HHHHHH--TTCTT---S-----
T ss_pred --C-CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh-----HHHHHH--hcCCC---C-----
Confidence 1 1234877665332 45789999999987743311111110 011111 12221 1
Q ss_pred cccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
-+...+|+|+++.+++... -..|++++|.+|-
T Consensus 207 ----R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 207 ----RLGGAQEIANAVAFLASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp ----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred ----CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence 2346888999998887432 2358999887664
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.99 E-value=1.8e-09 Score=95.22 Aligned_cols=208 Identities=13% Similarity=0.052 Sum_probs=125.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h 70 (360)
||.+++++|++ +|++|++.+|++... .....++. .+.+|++|+++++++++. .. ++|.++|
T Consensus 13 IG~aia~~la~------~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iDilVn 84 (255)
T d1gega_ 13 IGKAIALRLVK------DGFAVAIADYNDATAKAVASEINQAGGHAV-AVKVDVSDRDQVFAAVEQARKTLG-GFDVIVN 84 (255)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHHHHTT-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeeCCCHHHHHHHHHHHHHHhC-CccEEEe
Confidence 79999999999 999999999975321 01234677 899999999988777653 33 3899999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
.|+.... +.+..+++|+.|+.++.+++...++....-.+++++||...+..
T Consensus 85 nAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~-------------------- 144 (255)
T d1gega_ 85 NAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-------------------- 144 (255)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--------------------
T ss_pred cccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc--------------------
Confidence 9985321 23457899999999999887653221223467898887643210
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee-eCC
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY-LGN 210 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~ 210 (360)
.| ....|+.+|..-+ ...|+.+..+.|+.|--|. ... + ........+.+... .-.
T Consensus 145 ----~~-~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~----~~~---~--~~~~~~~~~~~~~~~~~~ 210 (255)
T d1gega_ 145 ----NP-ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM----WAE---I--DRQVSEAAGKPLGYGTAE 210 (255)
T ss_dssp ----CT-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH----HHH---H--HHHHHHHHTCCTTHHHHH
T ss_pred ----Cc-ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH----Hhh---h--hhhhHhhhcccchhHHHH
Confidence 01 1345877664322 4568999999998773321 000 0 00000000110000 000
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
.....-+.-+...+|+|+++++++... -..|+++.|.+|-.
T Consensus 211 ~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~ 253 (255)
T d1gega_ 211 FAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 253 (255)
T ss_dssp HHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence 000001112456889999998887432 23589998876643
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.98 E-value=1.2e-09 Score=96.29 Aligned_cols=198 Identities=11% Similarity=0.014 Sum_probs=127.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||.+++++|++ +|++|++.+|+.... .....++. ++.+|++|+++++++++.+ . ++|.++|
T Consensus 23 IG~aia~~la~------~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~-~~~~Dvs~~~~~~~~~~~~~~~~g-~iDilvn 94 (255)
T d1fmca_ 23 IGKEIAITFAT------AGASVVVSDINADAANHVVDEIQQLGGQAF-ACRCDITSEQELSALADFAISKLG-KVDILVN 94 (255)
T ss_dssp HHHHHHHHHHT------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-SCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHHcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC-CCCEeee
Confidence 79999999999 999999999875321 01235678 8999999999887766532 3 2899999
Q ss_pred eeeecCC--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCC
Q 037566 71 VMFQRLK--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKED 142 (360)
Q Consensus 71 ~A~~~~~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~ 142 (360)
.|+.... +.+..+++|+.|+.++.+++...++.. +-.++|++||...+..
T Consensus 95 nAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Ii~isS~~~~~~--------------------- 152 (255)
T d1fmca_ 95 NAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMAAENK--------------------- 152 (255)
T ss_dssp CCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCC---------------------
T ss_pred CCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-cccccccccccchhcc---------------------
Confidence 9985322 344578999999999998886654322 2347888887643211
Q ss_pred CCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 143 SLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 143 ~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
.| ....|+.+|..-+ ..+|+.+..+-|+.|--+......+. .....+. ...|+ |
T Consensus 153 ---~~-~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~----e~~~~~~--~~~pl---~--- 216 (255)
T d1fmca_ 153 ---NI-NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP----EIEQKML--QHTPI---R--- 216 (255)
T ss_dssp ---CT-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH----HHHHHHH--HTCSS---C---
T ss_pred ---cc-ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCH----HHHHHHH--hcCCC---C---
Confidence 01 1335877664322 46789999999988865421111111 0111111 12232 1
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
-+...+|+|+++++++... -..|++..|.+|..
T Consensus 217 ------R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~ 251 (255)
T d1fmca_ 217 ------RLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_dssp ------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred ------CCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence 1345788999988887422 23589998877754
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.96 E-value=1.3e-09 Score=96.29 Aligned_cols=202 Identities=11% Similarity=0.043 Sum_probs=124.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h 70 (360)
||++++++|++ +|++|++.+|+.... .....++. ++.+|++|+++++++++. ....+|+++|
T Consensus 20 IG~aia~~la~------~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvn 92 (259)
T d2ae2a_ 20 IGYGIVEELAS------LGASVYTCSRNQKELNDCLTQWRSKGFKVE-ASVCDLSSRSERQELMNTVANHFHGKLNILVN 92 (259)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHHHHHHTTTCCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCCce-EEEeeCCCHHHHHHHHHHHHHHhCCCceEEEE
Confidence 79999999999 999999999975321 01234677 899999999988776543 2212899999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
.|+.... +.+..+++|+.|+.++.+++...++.. +-.++|++||......
T Consensus 93 nAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~~-------------------- 151 (259)
T d2ae2a_ 93 NAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSVSGALA-------------------- 151 (259)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCGGGTSC--------------------
T ss_pred CCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-cccccccccccccccc--------------------
Confidence 9985321 234578999999999999887654322 3358999988643210
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
.| ....|+.+|..-+ ...++.+..+.|+.|--|...........-.....+. ...|+ |
T Consensus 152 ----~~-~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~--~~~pl---~-- 219 (259)
T d2ae2a_ 152 ----VP-YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLI--DRCAL---R-- 219 (259)
T ss_dssp ----CT-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHH--HTSTT---C--
T ss_pred ----cc-cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHH--hcCCC---C--
Confidence 01 1334776664322 4568999999998875432100000000000011111 12232 1
Q ss_pred ccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
-+...+|+|+++++++... -..|+++.|.+|-
T Consensus 220 -------R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 220 -------RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL 253 (259)
T ss_dssp -------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred -------CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence 1345788999988877432 2358988886653
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.96 E-value=6.9e-10 Score=98.06 Aligned_cols=208 Identities=15% Similarity=0.075 Sum_probs=126.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||.+++++|++ +|++|++.+|+.... .....++. .+.+|++|+++++++++.+ . ++|.++|.|+
T Consensus 17 IG~aia~~la~------~Ga~V~~~~r~~~~l~~~~~~~~~~~~-~~~~Dvt~~~~v~~~~~~~~~~~g-~iDilVnnAg 88 (256)
T d1k2wa_ 17 IGRAFAEAYVR------EGARVAIADINLEAARATAAEIGPAAC-AIALDVTDQASIDRCVAELLDRWG-SIDILVNNAA 88 (256)
T ss_dssp HHHHHHHHHHH------TTEEEEEEESCHHHHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhCCceE-EEEeeCCCHHHHHHHHHHHHHHhC-CccEEEeecc
Confidence 79999999999 999999999975321 00135677 8999999999988776542 2 2899999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++.+++...+....+-.++|++||...+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~----------------------- 145 (256)
T d1k2wa_ 89 LFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG----------------------- 145 (256)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------------------
T ss_pred cccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc-----------------------
Confidence 5321 24457899999999999876543211113458999988643210
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
.| ....|+.+|..-+ ...|+.+..+.|+.|-.|. ..... ..+. ...+.+... ....+
T Consensus 146 -~~-~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~----~~~~~--~~~~---~~~~~~~~~--~~~~~ 212 (256)
T d1k2wa_ 146 -EA-LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH----WDGVD--AKFA---DYENLPRGE--KKRQV 212 (256)
T ss_dssp -CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT----HHHHH--HHHH---HHHTCCTTH--HHHHH
T ss_pred -cc-cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh----hhhhh--hhhh---hhccCChHH--HHHHH
Confidence 01 1335776654322 4568999999998775432 11000 0000 000000000 00000
Q ss_pred ---cccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCccc
Q 037566 215 ---EHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFT 253 (360)
Q Consensus 215 ---~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~s 253 (360)
+-+.=+...+|+|.++++++... -..|+++.|.+|..+|
T Consensus 213 ~~~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 213 GAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp HHHSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence 00111446888999988876422 2358999997776554
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.95 E-value=1.7e-09 Score=95.68 Aligned_cols=205 Identities=9% Similarity=0.006 Sum_probs=124.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C---CCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W---FPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~---~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||.+++++|++ +|++|++.+|+.... . ....++. ++.+|++|+++++++++.+ . ++|.+
T Consensus 16 IG~aiA~~la~------~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G-~iDiL 87 (260)
T d1x1ta1 16 IGLGIATALAA------QGADIVLNGFGDAAEIEKVRAGLAAQHGVKVL-YDGADLSKGEAVRGLVDNAVRQMG-RIDIL 87 (260)
T ss_dssp HHHHHHHHHHH------TTCEEEEECCSCHHHHHHHHHHHHHHHTSCEE-EECCCTTSHHHHHHHHHHHHHHHS-CCSEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHHHHHhC-CCcEE
Confidence 79999999999 999999999875321 0 0134677 8999999999988877543 2 28999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|.|+.... +....+++|+.|+.++.+++...|+.. +-.++|++||...+..
T Consensus 88 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS~~~~~~------------------ 148 (260)
T d1x1ta1 88 VNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAHGLVA------------------ 148 (260)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC------------------
T ss_pred EeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-CCceEeecccccceec------------------
Confidence 999985321 344678999999999999887655422 2358999988643210
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee--e
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR--Y 207 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 207 (360)
.| ....|+.+|..-. ...|+.+..+.|+.|--|.-....... ....+.... .
T Consensus 149 ------~~-~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---------~~~~~~~~~~~~ 212 (260)
T d1x1ta1 149 ------SA-NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISAL---------AEKNGVDQETAA 212 (260)
T ss_dssp ------CT-TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------
T ss_pred ------cC-CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhh---------hhhcCCChHHHH
Confidence 01 1234877664322 467899999999988544211110000 000000000 0
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
........-..-+...+|+|+++++++... -..|++.+|.+|
T Consensus 213 ~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 213 RELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp --CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence 000000001122456889999999887432 235899888655
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.95 E-value=1.4e-09 Score=96.11 Aligned_cols=199 Identities=10% Similarity=0.050 Sum_probs=116.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||..++++|++ +|++|+..+|+.... .....++. .+.+|++|+++++++++.+ ...+|+++|
T Consensus 20 IG~aiA~~la~------~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvn 92 (259)
T d1xq1a_ 20 IGHAIVEEFAG------FGAVIHTCARNEYELNECLSKWQKKGFQVT-GSVCDASLRPEREKLMQTVSSMFGGKLDILIN 92 (259)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCceE-EEeccCCCHHHHHHHHHHHHHHhCCCcccccc
Confidence 79999999999 999999999975321 01234678 8999999998877766432 112899999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
.|+.... +.+..+++|+.|+.++.+++...|+.. +-.++|++||...... .
T Consensus 93 nAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS~~~~~~-----------------~-- 152 (259)
T d1xq1a_ 93 NLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSSIAGVVS-----------------A-- 152 (259)
T ss_dssp ECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEEC---------------------------
T ss_pred cccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-cccccccccccccccc-----------------c--
Confidence 9985321 345678999999999999887654422 3458999988643210 0
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
+ ....|+.+|.... ...|+.+..+-|+.|--|........ .....+. ...|+ |
T Consensus 153 -----~-~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~----~~~~~~~--~~~pl---~-- 215 (259)
T d1xq1a_ 153 -----S-VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD----EFKKVVI--SRKPL---G-- 215 (259)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------
T ss_pred -----c-ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchH----HHHHHHH--hCCCC---C--
Confidence 1 1334877664322 45789999999988855422111110 0000000 11121 1
Q ss_pred ccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCCc
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGDV 251 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~~ 251 (360)
-+...+|+|+++++++.. .-..|++..|.+|-.
T Consensus 216 -------R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s 250 (259)
T d1xq1a_ 216 -------RFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT 250 (259)
T ss_dssp ---------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred -------CCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEE
Confidence 133466788888877642 223589988876643
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.94 E-value=1.5e-09 Score=95.19 Aligned_cols=196 Identities=14% Similarity=0.064 Sum_probs=125.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~ 69 (360)
||..++++|++ +|++|+..+++.... . ....++. ++.+|++|+++++++++. .. ++|.++
T Consensus 13 IG~a~a~~la~------~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iDiLV 84 (244)
T d1edoa_ 13 IGKAIALSLGK------AGCKVLVNYARSAKAAEEVSKQIEAYGGQAI-TFGGDVSKEADVEAMMKTAIDAWG-TIDVVV 84 (244)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHHTCEEE-EEECCTTSHHHHHHHHHHHHHHSS-CCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCCHHHHHHHHHHHHHcCCcEE-EEeCCCCCHHHHHHHHHHHHHHcC-CCCccc
Confidence 79999999999 999998876553221 0 0134677 899999999988777653 23 389999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|.|+.... +.+..+++|+.|+.++.+++...|+.. +-.++|++||...+-.
T Consensus 85 nnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~~~~------------------- 144 (244)
T d1edoa_ 85 NNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASVVGLIG------------------- 144 (244)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHC-------------------
T ss_pred cccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-CCcEEEEEcChhhcCC-------------------
Confidence 99985321 345678999999999999987655422 2358999998754321
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
.| ....|+.+|..-. ..+|+.+..+.|+.|--|....... .....+. ...|+ |
T Consensus 145 -----~~-~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~-----~~~~~~~--~~~pl---~- 207 (244)
T d1edoa_ 145 -----NI-GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE-----DMEKKIL--GTIPL---G- 207 (244)
T ss_dssp -----CT-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH-----HHHHHHH--TSCTT---C-
T ss_pred -----CC-CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhH-----HHHHHHH--hcCCC---C-
Confidence 01 1234777664322 4678999999998774331111100 0111111 12222 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCC---CCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTDR---AKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~~---~~g~~yni~~g~ 250 (360)
-+...+|+|+++.+++..+. ..|++..|.+|-
T Consensus 208 --------R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 208 --------RTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp --------SCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred --------CCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence 13458889999988764443 358888886653
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.93 E-value=5.7e-10 Score=98.20 Aligned_cols=199 Identities=12% Similarity=0.036 Sum_probs=125.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~~ 74 (360)
||.+++++|++ +|++|++.+|+.... ..+..++. ++.+|++|+++++++++.+ . ++|+++|.|+.
T Consensus 18 IG~aia~~la~------~Ga~V~i~~r~~~~~~~~~~~~~~~~-~~~~Dvs~~~~v~~~~~~~~~~~g-~iDilVnnAG~ 89 (250)
T d1ydea1 18 IGAGIVRAFVN------SGARVVICDKDESGGRALEQELPGAV-FILCDVTQEDDVKTLVSETIRRFG-RLDCVVNNAGH 89 (250)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHCTTEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEEEECCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHhcCCCe-EEEccCCCHHHHHHHHHHHHHhcC-CCCEEEecccc
Confidence 79999999999 999999999975321 00124677 9999999999987776543 2 28999999984
Q ss_pred cC--C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 75 RL--K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 75 ~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.. . +.+..+++|+.|+.++.+++...|+... .++|++||...+.. .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~Ii~isS~~~~~~---------------~------- 145 (250)
T d1ydea1 90 HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGAIG---------------Q------- 145 (250)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCHHHHHC---------------C-------
T ss_pred cccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC--CCCccccccccccc---------------c-------
Confidence 21 1 2345789999999999999887665222 48999988654321 0
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCC---cchhHHHHHHHHHHHhhcCCCeeeeCCc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRS---LNNSLLTLAVYATICRHQGLPFRYLGNK 211 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 211 (360)
| ....|+.+|.... ...|+.+..+.|+.|--|.... .... ....+.... ...|+ |
T Consensus 146 --~-~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~--~~~~~~~~~--~~~pl---~-- 213 (250)
T d1ydea1 146 --A-QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPD--PRASIREGM--LAQPL---G-- 213 (250)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSS--HHHHHHHHH--HTSTT---S--
T ss_pred --c-CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCC--HHHHHHHHH--hcCCC---C--
Confidence 1 1334877664322 4578999999998874321000 0000 000110000 12222 1
Q ss_pred ccccccccccCHHHHHHHHHHHHcC-CCCCCCceeccCCCc
Q 037566 212 YTWEHFCDMSDSRVLAEQQIWAATT-DRAKNQAFNCTNGDV 251 (360)
Q Consensus 212 ~~~~~~~d~~~v~dla~a~~~a~~~-~~~~g~~yni~~g~~ 251 (360)
-+...+|+|+++++++.+ .-..|+++.|.+|-.
T Consensus 214 -------R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~ 247 (250)
T d1ydea1 214 -------RMGQPAEVGAAAVFLASEANFCTGIELLVTGGAE 247 (250)
T ss_dssp -------SCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred -------CCCCHHHHHHHHHHHhCccCCCcCCeEEECCCcc
Confidence 134578899888887642 223589988876654
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.92 E-value=1.2e-09 Score=96.53 Aligned_cols=202 Identities=11% Similarity=-0.030 Sum_probs=126.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||..++++|++ +|++|++.+|+.... .....++. .+.+|++|+++++++++.+ . ++|++
T Consensus 16 IG~aia~~la~------~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~-~~~~Dvt~~~~v~~~~~~~~~~~G-~iDiL 87 (258)
T d1iy8a_ 16 LGRATAVRLAA------EGAKLSLVDVSSEGLEASKAAVLETAPDAEVL-TTVADVSDEAQVEAYVTATTERFG-RIDGF 87 (258)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHCTTCCEE-EEECCTTSHHHHHHHHHHHHHHHS-CCSEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhhCCCCeEE-EEeccCCCHHHHHHHHHHHHHHhC-CCCEE
Confidence 79999999999 999999999975321 01134677 8999999999987776533 3 28999
Q ss_pred EEeeeecC--C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 69 FWVMFQRL--K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 69 ~h~A~~~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
+|.|+... . +.+..+++|+.|+.++.+++...|+.. +-.++|++||...+..
T Consensus 88 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~~----------------- 149 (258)
T d1iy8a_ 88 FNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIRG----------------- 149 (258)
T ss_dssp EECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSB-----------------
T ss_pred EECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-cCCCCcccccHhhccC-----------------
Confidence 99998431 1 234578999999999999886554312 3458999988643210
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhH---HHHHHHHHHHhhcCCCe
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSL---LTLAVYATICRHQGLPF 205 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~---~~~~~~~~~~~~~~~~~ 205 (360)
.| ....|+.+|.... ...|+.+..+.|+.|.-|.-.+..... ..-.....+. ...|+
T Consensus 150 -------~~-~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~~~pl 219 (258)
T d1iy8a_ 150 -------IG-NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFI--QVNPS 219 (258)
T ss_dssp -------CS-SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHH--TTCTT
T ss_pred -------CC-CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHH--hcCCC
Confidence 01 1334877664322 456899999999888543100000000 0000000000 11121
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCCc
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGDV 251 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~~ 251 (360)
.-+...+|+|+++++++.. .-..|++..|.+|..
T Consensus 220 ------------~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 220 ------------KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp ------------CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred ------------CCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 1134678899998888743 223589998877764
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=2.5e-09 Score=96.38 Aligned_cols=200 Identities=10% Similarity=0.002 Sum_probs=123.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----------C--CCCCCceeeEeeccCChHHHHHHHccC----CCCc
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----------W--FPSSHVDHYITFDALDSTDTTQKLSSI----SQEV 65 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----------~--~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v 65 (360)
||.+++++|++ +|++|++.+|+.... . ....++. .+.+|++|+++++++++.+ . ++
T Consensus 24 IG~aia~~la~------~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~-~~~~Dvs~~~~v~~~~~~~~~~~G-~i 95 (297)
T d1yxma1 24 IGKAIVKELLE------LGSNVVIASRKLERLKSAADELQANLPPTKQARVI-PIQCNIRNEEEVNNLVKSTLDTFG-KI 95 (297)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhhhccccCceEE-EEeccCCCHHHHHHHHHHHHHHhC-Ce
Confidence 79999999999 999999999974210 0 1134677 8999999999887776532 2 28
Q ss_pred cEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 66 THLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 66 ~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
|.++|.|+.... +.+..+++|+.|+..+.+++...|+.. +-.++|.+||+...+
T Consensus 96 DiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~Ii~~ss~~~~~---------------- 158 (297)
T d1yxma1 96 NFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNIIVPTKAG---------------- 158 (297)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCCCTTC----------------
T ss_pred EEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-ccccccccccccccc----------------
Confidence 999999985321 344578999999999999887644312 335677765532111
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCee
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
. | ...+|+.+|...+ ..+|+.+..+.|+.|.-+.......... -..+..+. ...|+
T Consensus 159 ~---------~-~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~-~~~~~~~~--~~~pl- 224 (297)
T d1yxma1 159 F---------P-LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG-QSFFEGSF--QKIPA- 224 (297)
T ss_dssp C---------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG-GGGGTTGG--GGSTT-
T ss_pred c---------c-ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccC-HHHHHHHH--hcCCC-
Confidence 0 1 1234766554322 4568999999999886543211110000 00000000 01111
Q ss_pred eeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 207 ~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
.-+...+|+|+++++++... -..|+++.|.+|..
T Consensus 225 -----------gR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s 260 (297)
T d1yxma1 225 -----------KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS 260 (297)
T ss_dssp -----------SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -----------CCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence 12445788999999887432 23589998877754
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.91 E-value=1.9e-09 Score=95.35 Aligned_cols=204 Identities=9% Similarity=0.058 Sum_probs=124.1
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW--------FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~--------~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~ 69 (360)
||.+++++|++ +|++|++.+|+..... ....++. .+.+|++|+++++++++. .. .+|+++
T Consensus 21 IG~aia~~la~------~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iDilV 92 (260)
T d1h5qa_ 21 IGLAFTRAVAA------AGANVAVIYRSAADAVEVTEKVGKEFGVKTK-AYQCDVSNTDIVTKTIQQIDADLG-PISGLI 92 (260)
T ss_dssp HHHHHHHHHHH------TTEEEEEEESSCTTHHHHHHHHHHHHTCCEE-EEECCTTCHHHHHHHHHHHHHHSC-SEEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHHHhCCceE-EEEccCCCHHHHHHHHHHHHHHhC-CCcEec
Confidence 79999999999 9999999999865420 0134678 899999999988777653 33 389999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|.|+.... +.+..+++|+.|+.++.+++...|.....-.+++..||...+... . ..
T Consensus 93 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~-------------~--~~ 157 (260)
T d1h5qa_ 93 ANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN-------------Q--SS 157 (260)
T ss_dssp ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-------------E--EE
T ss_pred ccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccc-------------c--cc
Confidence 99985322 244578999999999988876543212234556666655433211 0 00
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
- . ..+ ....|+.+|..-. ...|+.+..+.|+.|--+........ ....+. ...|+.-
T Consensus 158 ~-~-~~~-~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~-----~~~~~~--~~~pl~R--- 224 (260)
T d1h5qa_ 158 L-N-GSL-TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK-----IRDHQA--SNIPLNR--- 224 (260)
T ss_dssp T-T-EEC-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH-----HHHHHH--HTCTTSS---
T ss_pred c-c-cCc-cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHH-----HHHHHH--hcCCCCC---
Confidence 0 0 001 1345877664322 45789999999988854422111111 111111 1233211
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
+...+|+|+++++++... -..|+++.|.+|.
T Consensus 225 ---------~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 225 ---------FAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp ---------CBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred ---------CcCHHHHHHHHHHHhcchhCCCcCceEEECCCe
Confidence 234566788877776422 2358998886664
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.88 E-value=1.2e-09 Score=96.20 Aligned_cols=199 Identities=11% Similarity=0.010 Sum_probs=124.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||.+++++|++ +|++|+..+|+.... .....+.. ++.+|++|+++++++++.+ . .+|+++|.|+
T Consensus 18 IG~aia~~la~------~Ga~V~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g-~iDilVnnAG 89 (253)
T d1hxha_ 18 VGLEVVKLLLG------EGAKVAFSDINEAAGQQLAAELGERSM-FVRHDVSSEADWTLVMAAVQRRLG-TLNVLVNNAG 89 (253)
T ss_dssp HHHHHHHHHHH------TTCEEEEECSCHHHHHHHHHHHCTTEE-EECCCTTCHHHHHHHHHHHHHHHC-SCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhCCCeE-EEEeecCCHHHHHHHHHHHHHHhC-CCCeEEeccc
Confidence 79999999999 999999999875321 00134567 8999999998887776543 2 2899999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++.+++...|+.. + .++|++||...+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~-G~Iv~isS~~~~~~----------------------- 144 (253)
T d1hxha_ 90 ILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSIINMASVSSWLP----------------------- 144 (253)
T ss_dssp CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEEEECCGGGTSC-----------------------
T ss_pred ccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-C-CceecccchhhhcC-----------------------
Confidence 5321 245678999999999999998877533 2 68999988643210
Q ss_pred CCCCCCCcHHHHHHHHh------------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcc
Q 037566 145 RLPFPNFYYAVEDIAAS------------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKY 212 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e------------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 212 (360)
.| ....|+.+|...+ +.+++.+..+-|+.|--|.....+... ....... ...+..
T Consensus 145 -~~-~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~----~~~~~~~-~~~~~~------ 211 (253)
T d1hxha_ 145 -IE-QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG----VSKEMVL-HDPKLN------ 211 (253)
T ss_dssp -CT-TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT----CCHHHHB-CBTTTB------
T ss_pred -cc-ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcch----hhHHHHH-hCcccc------
Confidence 01 1334877664322 225688999999877543100000000 0000000 000100
Q ss_pred cccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCC
Q 037566 213 TWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNG 249 (360)
Q Consensus 213 ~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g 249 (360)
..--+...+|+|+++++++... -..|++++|.+|
T Consensus 212 ---~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 212 ---RAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp ---TTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred ---ccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence 1112456789999999887432 235899888555
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.87 E-value=1.6e-09 Score=95.60 Aligned_cols=201 Identities=15% Similarity=0.090 Sum_probs=123.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h 70 (360)
||.+++++|++ +|++|++.+|+.... .....++. ++.+|++|+++++++++. .. ++|.++|
T Consensus 14 IG~aia~~la~------~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~-~~~~Dvs~~~~v~~~~~~~~~~~g-~iDilVn 85 (257)
T d2rhca1 14 IGLEIARRLGK------EGLRVFVCARGEEGLRTTLKELREAGVEAD-GRTCDVRSVPEIEALVAAVVERYG-PVDVLVN 85 (257)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHTC-SCSEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeecCCHHHHHHHHHHHHHHhC-CCCEEEe
Confidence 79999999999 999999999975321 01134678 899999999988776653 33 3899999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhcc-CCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNK-GRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~-~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
.|+.... +.+..+++|+.|+.++.+++...++ ...+-.++|.+||...+..
T Consensus 86 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~------------------- 146 (257)
T d2rhca1 86 NAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG------------------- 146 (257)
T ss_dssp CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC-------------------
T ss_pred cccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc-------------------
Confidence 9985321 2346789999999999999865311 0113467888887643210
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHH------HHHHHHHHHhhcCCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLL------TLAVYATICRHQGLP 204 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~------~~~~~~~~~~~~~~~ 204 (360)
.| ....|+.+|..-. ...|+.+..+.|+.|--|.......... .-.....+. ...|
T Consensus 147 -----~~-~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~P 218 (257)
T d2rhca1 147 -----VV-HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT--ARVP 218 (257)
T ss_dssp -----CT-TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHH--TTST
T ss_pred -----cc-cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHH--hcCC
Confidence 01 1234877664322 4568999999998774321000000000 000000010 1112
Q ss_pred eeeeCCcccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCC
Q 037566 205 FRYLGNKYTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNG 249 (360)
Q Consensus 205 ~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g 249 (360)
+ | -+...+|+|+++++++.. .-..|+++.|.+|
T Consensus 219 l---g---------R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 219 I---G---------RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp T---S---------SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred C---C---------CCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 1 1 245688899999888742 2245899888655
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.86 E-value=2.7e-09 Score=94.13 Aligned_cols=143 Identities=14% Similarity=0.070 Sum_probs=99.3
Q ss_pred chHHHHHHHhcCCCCCCCCcE-EEEEecCCCCCC----------CCCCCceeeEeeccCChHHHHHHHccCCC--CccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWK-VYGTARRPPPSW----------FPSSHVDHYITFDALDSTDTTQKLSSISQ--EVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~-V~~l~r~~~~~~----------~~~~~v~~~v~gDl~d~~~l~~~l~~~~~--~v~~V 68 (360)
||..++++|++ +|++ |+.+.|+..+.. ....++. ++.+|++|+++++++++.+.. +++.|
T Consensus 21 IG~a~a~~la~------~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~-~~~~Dv~d~~~~~~~~~~i~~~~~i~~v 93 (259)
T d2fr1a1 21 VGGQIARWLAR------RGAPHLLLVSRSGPDADGAGELVAELEALGARTT-VAACDVTDRESVRELLGGIGDDVPLSAV 93 (259)
T ss_dssp HHHHHHHHHHH------HTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHTSCTTSCEEEE
T ss_pred HHHHHHHHHHH------CCCCEEEEEeCCccCHHHHHHHHHHHHhcccccc-ccccccchHHHHHHhhcccccccccccc
Confidence 79999999999 8985 777777632210 0134688 999999999999888876532 37899
Q ss_pred EEeeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 69 FWVMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 69 ~h~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
+|.|+.... + .+..+++|+.|+.++.+++... +..+||++||.+..-..
T Consensus 94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-----~~~~iv~~SS~a~~~g~----------------- 151 (259)
T d2fr1a1 94 FHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-----DLTAFVLFSSFASAFGA----------------- 151 (259)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTCC-----------------
T ss_pred ccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-----CCceEeeecchhhccCC-----------------
Confidence 999985322 2 2346789999999999987764 56789999886543110
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh------cCCCCcEEEEcCCCeeecCC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS------YSPAVTYSVHRSSIIIGASS 181 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e------~~~~~~~~ilRp~~vyGp~~ 181 (360)
+ ....|+.+|...+ +..|++++.+.|+.+.+++.
T Consensus 152 -------~-~~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~ 191 (259)
T d2fr1a1 152 -------P-GLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGM 191 (259)
T ss_dssp -------T-TCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC----
T ss_pred -------c-ccHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCcc
Confidence 0 0223777665433 56799999999998887653
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.84 E-value=5.5e-09 Score=92.20 Aligned_cols=202 Identities=12% Similarity=0.076 Sum_probs=123.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h 70 (360)
||++++++|++ +|++|++.+|++... ......+. ++.+|++|+++++++++ ..+..+|+++|
T Consensus 18 IG~aia~~la~------~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~-~~~~D~s~~~~~~~~~~~~~~~~~g~idilin 90 (258)
T d1ae1a_ 18 IGYAIVEELAG------LGARVYTCSRNEKELDECLEIWREKGLNVE-GSVCDLLSRTERDKLMQTVAHVFDGKLNILVN 90 (258)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHTTSCCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCCce-EEEeecCCHHHHHHHHHHHHHHhCCCcEEEec
Confidence 79999999999 999999999975321 01234567 88999999998766653 22112789999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
+|+.... +....+++|+.++.++.+++...|+.. +..++|++||...... .
T Consensus 91 nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-~~g~ii~isS~~~~~~---------------~---- 150 (258)
T d1ae1a_ 91 NAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGFSA---------------L---- 150 (258)
T ss_dssp CCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGTSC---------------C----
T ss_pred cccccccCccccCCHHHHhhhhhhccccccccccccccccccc-cccccccccccccccc---------------c----
Confidence 9985321 345678999999999998886544322 4568999988653210 0
Q ss_pred CCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhH-HHHHHHHHHHhhcCCCeeeeCC
Q 037566 142 DSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSL-LTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
| ....|+.+|...+ ...|+.+-.+.|+.|.-|.-.+.+... ..-.....+.+ ..|+ |
T Consensus 151 -----~-~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~pl---g- 218 (258)
T d1ae1a_ 151 -----P-SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV--KTPM---G- 218 (258)
T ss_dssp -----T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHH--HSTT---C-
T ss_pred -----c-cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHh--cCCC---C-
Confidence 1 1234766553222 456899999999999765322211110 00011111111 1121 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCC
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGD 250 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~ 250 (360)
-+...+|+|.++++++.. ....|+.+.|.+|-
T Consensus 219 --------R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~ 252 (258)
T d1ae1a_ 219 --------RAGKPQEVSALIAFLCFPAASYITGQIIWADGGF 252 (258)
T ss_dssp --------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --------CCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCe
Confidence 245688999999888742 23458888786553
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.84 E-value=2.5e-09 Score=94.18 Aligned_cols=196 Identities=11% Similarity=-0.008 Sum_probs=124.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||.+++++|++ +|++|+..+|+.... .....++. ++.+|++|+++++++++.+ . ++|.++|.|+
T Consensus 17 IG~aia~~la~------~Ga~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iDilVnnAg 88 (254)
T d1hdca_ 17 LGAEAARQAVA------AGARVVLADVLDEEGAATARELGDAAR-YQHLDVTIEEDWQRVVAYAREEFG-SVDGLVNNAG 88 (254)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHTTGGGEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHhCCceE-EEEcccCCHHHHHHHHHHHHHHcC-CccEEEecCc
Confidence 79999999999 999999999975321 01135678 9999999999988776543 3 2899999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +.+..+++|+.|+.++.+++...|+.. +-.++|++||...+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-~~G~II~isS~~~~~~----------------------- 144 (254)
T d1hdca_ 89 ISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMG----------------------- 144 (254)
T ss_dssp CCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC-----------------------
T ss_pred cccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-CCCeecccccchhccc-----------------------
Confidence 5322 234578999999999999987654422 3468999998753311
Q ss_pred CCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
.| ....|+.+|...+ ...|+.+..+-|+.|.-+. .. . ..... .......
T Consensus 145 -~~-~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~-------~~------~----~~~~~-~~~~~~~- 203 (254)
T d1hdca_ 145 -LA-LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-------TA------E----TGIRQ-GEGNYPN- 203 (254)
T ss_dssp -CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------HH------H----HTCCC-STTSCTT-
T ss_pred -cc-chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc-------ch------h----cCHHH-HHHHHhC-
Confidence 01 1234877664332 4568999999998774321 00 0 00000 0000000
Q ss_pred cccccc-cCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 215 EHFCDM-SDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 215 ~~~~d~-~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
.-+.-+ +..+|+|+++++++... -..|+++.|.+|-
T Consensus 204 ~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~ 242 (254)
T d1hdca_ 204 TPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGW 242 (254)
T ss_dssp STTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCc
Confidence 000111 35788999998887422 2358999887664
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.83 E-value=4.7e-09 Score=93.36 Aligned_cols=205 Identities=11% Similarity=0.056 Sum_probs=122.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
||.+++++|++ +|++|++.+|+.... .....++. .+.+|++|+++++++++.+ . ++|+
T Consensus 17 IG~aia~~la~------~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~-~~~~Dvs~~~~v~~~~~~~~~~~g-~iDi 88 (272)
T d1xkqa_ 17 IGRTTAILFAQ------EGANVTITGRSSERLEETRQIILKSGVSEKQVN-SVVADVTTEDGQDQIINSTLKQFG-KIDV 88 (272)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCCCCceE-EEEccCCCHHHHHHHHHHHHHHhC-CceE
Confidence 79999999999 999999999975321 01124577 8999999999887776532 2 2899
Q ss_pred EEEeeeecCC-------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccC-ccccccccCCcccCCcC
Q 037566 68 LFWVMFQRLK-------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGT-KHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 68 V~h~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~-~vYg~~~~~~~~~g~~~ 133 (360)
++|.|+.... +....+++|+.|+.++.+++...|+.+. ..+|..+|+ +...
T Consensus 89 lvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~Ss~a~~~------------- 153 (272)
T d1xkqa_ 89 LVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQ------------- 153 (272)
T ss_dssp EEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSS-------------
T ss_pred EEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC--Cccccccchhcccc-------------
Confidence 9999985321 1345678999999999999877554222 245555443 2110
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHH---------h-cCCCCcEEEEcCCCeeecCCCC-cchhHHHHHHHHHHHhhcC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAA---------S-YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQG 202 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~---------e-~~~~~~~~ilRp~~vyGp~~~~-~~~~~~~~~~~~~~~~~~~ 202 (360)
+ .| -...|+.+|..- | ..+|+.+..+.|+.|--+.... .......-.....+.+ ..
T Consensus 154 ----~-------~~-~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~ 220 (272)
T d1xkqa_ 154 ----A-------QP-DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS-HK 220 (272)
T ss_dssp ----C-------CC-SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH-CT
T ss_pred ----C-------CC-CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHH-Hh
Confidence 0 01 133587766432 2 5678999999998875431100 0000000001111111 11
Q ss_pred CCeeeeCCcccccccccccCHHHHHHHHHHHHcCC---CCCCCceeccCCCcc
Q 037566 203 LPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD---RAKNQAFNCTNGDVF 252 (360)
Q Consensus 203 ~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~---~~~g~~yni~~g~~~ 252 (360)
...|. | -+...+|+|+++++++..+ -..|+++.|.+|-.+
T Consensus 221 ~~~Pl-g---------R~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 221 ECIPI-G---------AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp TTCTT-S---------SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred cCCCC-C---------CCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 11111 1 1345788999988877422 246999988777654
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.83 E-value=9.1e-09 Score=90.55 Aligned_cols=198 Identities=14% Similarity=0.068 Sum_probs=123.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccC-ChHHHHHHHc----cCCCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDAL-DSTDTTQKLS----SISQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~-d~~~l~~~l~----~~~~~v~~V 68 (360)
||..++++|++ +|++|+++.|+.... .....++. ++.+|++ +.++++++++ ... ++|++
T Consensus 17 IG~~~A~~la~------~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~g-~iDil 88 (254)
T d1sbya1 17 IGLDTSRELVK------RNLKNFVILDRVENPTALAELKAINPKVNIT-FHTYDVTVPVAESKKLLKKIFDQLK-TVDIL 88 (254)
T ss_dssp HHHHHHHHHHH------TCCSEEEEEESSCCHHHHHHHHHHCTTSEEE-EEECCTTSCHHHHHHHHHHHHHHHS-CCCEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCcccHHHHHHHHhhCCCCCEE-EEEeecCCCHHHHHHHHHHHHHHcC-CCCEE
Confidence 79999999999 999999998875431 01234678 8999998 5455555443 233 28999
Q ss_pred EEeeeec-CCChhHhhhhhHHHHHHHHHHHHhhccC--CCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 69 FWVMFQR-LKSEEINISNNSTMFKNVMSVVVDSNKG--RSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 69 ~h~A~~~-~~~~~~~~~vNv~gt~nll~a~~~~~~~--~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
++.|+.. ..+.+..+++|+.|+.++..++...|+. ...-.++|++||...+..
T Consensus 89 vnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~------------------------ 144 (254)
T d1sbya1 89 INGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA------------------------ 144 (254)
T ss_dssp EECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC------------------------
T ss_pred EeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC------------------------
Confidence 9999954 4478889999999999999998775531 112467999988654321
Q ss_pred CCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCccccc
Q 037566 146 LPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWE 215 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 215 (360)
.+ ....|+.+|..-. ...++.+..+.|+.|.-|-................. ..+.
T Consensus 145 ~~-~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~------------ 209 (254)
T d1sbya1 145 IH-QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL--LLSH------------ 209 (254)
T ss_dssp CT-TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHH--HTTS------------
T ss_pred CC-CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhc--cccC------------
Confidence 01 1234877664322 356899999999999764110000000000000000 0011
Q ss_pred ccccccCHHHHHHHHHHHHcCCCCCCCceeccCCC
Q 037566 216 HFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGD 250 (360)
Q Consensus 216 ~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~ 250 (360)
.....+++|++++.++.. ...|+++.+..|.
T Consensus 210 ---~~~~~e~va~~~~~~~~~-~~tG~vi~vdgG~ 240 (254)
T d1sbya1 210 ---PTQTSEQCGQNFVKAIEA-NKNGAIWKLDLGT 240 (254)
T ss_dssp ---CCEEHHHHHHHHHHHHHH-CCTTCEEEEETTE
T ss_pred ---CCCCHHHHHHHHHHhhhC-CCCCCEEEECCCE
Confidence 122366788888877654 3468999887664
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.82 E-value=8.4e-09 Score=91.08 Aligned_cols=143 Identities=12% Similarity=-0.008 Sum_probs=100.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h 70 (360)
||.+++++|++ +|++|++.+|+.... .....++. .+.+|++|+++++++++.+ . .+|+++|
T Consensus 17 IG~aia~~la~------~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g-~iDilVn 88 (260)
T d1zema1 17 IGLATALRLAE------EGTAIALLDMNREALEKAEASVREKGVEAR-SYVCDVTSEEAVIGTVDSVVRDFG-KIDFLFN 88 (260)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHTTTSCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHhC-CCCeehh
Confidence 79999999999 999999999975321 01234678 8999999999887776532 3 2899999
Q ss_pred eeeecC--C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 71 VMFQRL--K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 71 ~A~~~~--~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
.|+... . +....+++|+.++.++.+++...|+.. +-.++|++||...+.. .
T Consensus 89 naG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~II~isS~~~~~~---------------~--- 149 (260)
T d1zema1 89 NAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMAGVKG---------------P--- 149 (260)
T ss_dssp CCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHSC---------------C---
T ss_pred hhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-cCCCCCeeechhhccC---------------C---
Confidence 998431 1 234578999999999999987654312 3358999988653321 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeee
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyG 178 (360)
| ....|+.+|..-+ ..+|+.+..+.|+.|--
T Consensus 150 ------~-~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T 190 (260)
T d1zema1 150 ------P-NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGP 190 (260)
T ss_dssp ------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred ------c-chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccC
Confidence 1 1234877664322 45689999999988754
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.82 E-value=9.5e-09 Score=89.27 Aligned_cols=193 Identities=10% Similarity=0.038 Sum_probs=119.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC----
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK---- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~---- 77 (360)
||++++++|++ +|++|++.+|+.... .....+ ++.+|+++. +.++++.... +|+++|.|+....
T Consensus 16 IG~aia~~l~~------~Ga~V~~~~r~~~~l--~~~~~~-~~~~Dv~~~--~~~~~~~~g~-iD~lVnnAG~~~~~~~~ 83 (234)
T d1o5ia_ 16 IGRAVADVLSQ------EGAEVTICARNEELL--KRSGHR-YVVCDLRKD--LDLLFEKVKE-VDILVLNAGGPKAGFFD 83 (234)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHH--HHTCSE-EEECCTTTC--HHHHHHHSCC-CSEEEECCCCCCCBCGG
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHH--HhcCCc-EEEcchHHH--HHHHHHHhCC-CcEEEecccccCCcchh
Confidence 79999999999 999999999975321 123457 889999875 4445554443 8999999984321
Q ss_pred -----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCc
Q 037566 78 -----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFY 152 (360)
Q Consensus 78 -----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~ 152 (360)
+.+..+++|+.++.++.+++...|+.. +-.++|.+||...... .+ ....
T Consensus 84 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~G~ii~i~S~~~~~~------------------------~~-~~~~ 137 (234)
T d1o5ia_ 84 ELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVISP------------------------IE-NLYT 137 (234)
T ss_dssp GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC------------------------CT-TBHH
T ss_pred hhhhHHHHHHhhhhhhhhhhhhhccccccccc-cccccccccccccccc------------------------cc-cccc
Confidence 234568999999999998887654322 3457888887643221 01 1234
Q ss_pred HHHHHH--------HHh--cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccC
Q 037566 153 YAVEDI--------AAS--YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSD 222 (360)
Q Consensus 153 Y~~ek~--------l~e--~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~ 222 (360)
|..+|. ++. ...|+.+..+.|+.+--+........ .....+. ...|+ | -+..
T Consensus 138 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~----~~~~~~~--~~~pl---~---------R~~~ 199 (234)
T d1o5ia_ 138 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE----EKKKQVE--SQIPM---R---------RMAK 199 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH----HHHHHHH--TTSTT---S---------SCBC
T ss_pred chhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH----HHHHHHH--hcCCC---C---------CCcC
Confidence 665543 222 45689999999987754421111110 0111111 12222 1 2345
Q ss_pred HHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 223 SRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 223 v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
.+|+|+++++++... -..|+++.|.+|-
T Consensus 200 pediA~~v~fL~S~~s~~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 200 PEEIASVVAFLCSEKASYLTGQTIVVDGGL 229 (234)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhChhhcCCcCcEEEECccc
Confidence 888999988887432 2358998886653
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.82 E-value=1.3e-08 Score=88.86 Aligned_cols=194 Identities=11% Similarity=-0.001 Sum_probs=123.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~h~A~ 73 (360)
||..++++|++ +|++|++.+|+.... .....++. ++++|++|++++++.++.+ . ++|.++|.|+
T Consensus 17 IG~aia~~l~~------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dls~~~~i~~~~~~i~~~~g-~iDiLinnAg 88 (241)
T d2a4ka1 17 IGRAALDLFAR------EGASLVAVDREERLLAEAVAALEAEAI-AVVADVSDPKAVEAVFAEALEEFG-RLHGVAHFAG 88 (241)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHTCCSSEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCEEEEGGG
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHcCCceE-EEEecCCCHHHHHHHHHHHHHHhC-CccEeccccc
Confidence 79999999999 999999999975431 01245677 8999999999987776643 3 2899999998
Q ss_pred ecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCC
Q 037566 74 QRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSL 144 (360)
Q Consensus 74 ~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p 144 (360)
.... +....+++|+.++.++.+++...++ +-+.++.+||.+....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~---~~~~i~~~ss~a~~~~----------------------- 142 (241)
T d2a4ka1 89 VAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLE---EGGSLVLTGSVAGLGA----------------------- 142 (241)
T ss_dssp GTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCC---TTCEEEEECCCTTCCH-----------------------
T ss_pred cccccchhhhhccccccccccccccccccccccccccc---cccceeeccccccccc-----------------------
Confidence 5321 2346789999999999999887643 3345555555432211
Q ss_pred CCCCCCCcHHH--------HHHHHh--cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccc
Q 037566 145 RLPFPNFYYAV--------EDIAAS--YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTW 214 (360)
Q Consensus 145 ~~p~p~~~Y~~--------ek~l~e--~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 214 (360)
| ....|+. ++.++. ..+|+.+..+.|+.|=.+.-.+... ..+....+ ..|+ +
T Consensus 143 --~-~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~-----~~~~~~~~--~~p~---~----- 204 (241)
T d2a4ka1 143 --F-GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP-----WAWEQEVG--ASPL---G----- 204 (241)
T ss_dssp --H-HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH-----HHHHHHHH--TSTT---C-----
T ss_pred --c-CccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhH-----hHHHHHHh--CCCC---C-----
Confidence 0 0123553 333333 5678999999998884432111111 11111211 2232 1
Q ss_pred cccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 215 EHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 215 ~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
-+...+|+|+++.+++... -..|+++.|.+|..
T Consensus 205 ----r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 205 ----RAGRPEEVAQAALFLLSEESAYITGQALYVDGGRS 239 (241)
T ss_dssp ----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred ----CCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence 1345888999988887432 23588888876653
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.81 E-value=9.9e-09 Score=91.33 Aligned_cols=205 Identities=12% Similarity=0.047 Sum_probs=124.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
||++++++|++ +|++|++.+|+.... .....++. .+.+|++|+++++++++.+ . .+|+
T Consensus 16 IG~aia~~la~------~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G-~iDi 87 (274)
T d1xhla_ 16 IGRSAAVIFAK------EGAQVTITGRNEDRLEETKQQILKAGVPAEKIN-AVVADVTEASGQDDIINTTLAKFG-KIDI 87 (274)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcceE-EEEeeCCCHHHHHHHHHHHHHHcC-CceE
Confidence 79999999999 999999999975321 01124678 8999999999887776532 2 2899
Q ss_pred EEEeeeecC--C---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCC
Q 037566 68 LFWVMFQRL--K---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHD 136 (360)
Q Consensus 68 V~h~A~~~~--~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~ 136 (360)
++|.|+... . +.+..+++|+.|+..+.+++...|+.. +-.+++++||.+.+..
T Consensus 88 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~ii~~ss~~~~~~--------------- 151 (274)
T d1xhla_ 88 LVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-KGEIVNVSSIVAGPQA--------------- 151 (274)
T ss_dssp EEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGSSSC---------------
T ss_pred EEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-ccccccchhhhhcccc---------------
Confidence 999997421 1 134578999999999999987765422 3356777766432110
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCc-chhHHHHHHHHHHHhhcCCCe
Q 037566 137 PPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSL-NNSLLTLAVYATICRHQGLPF 205 (360)
Q Consensus 137 ~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~-~~~~~~~~~~~~~~~~~~~~~ 205 (360)
. + ....|+.+|..-+ ...|+.+..+.|+.|--|..... ......-.....+.. .....
T Consensus 152 ------~---~-~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~~~i 220 (274)
T d1xhla_ 152 ------H---S-GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS-RKECI 220 (274)
T ss_dssp ------C---T-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH-CTTTC
T ss_pred ------C---C-CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHH-HHcCC
Confidence 0 1 1235876654322 45789999999998854311000 000000011111111 11111
Q ss_pred eeeCCcccccccccccCHHHHHHHHHHHHcC---CCCCCCceeccCCCc
Q 037566 206 RYLGNKYTWEHFCDMSDSRVLAEQQIWAATT---DRAKNQAFNCTNGDV 251 (360)
Q Consensus 206 ~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~---~~~~g~~yni~~g~~ 251 (360)
|. | -+...+|+|+++++++.. .-..|+++.|.+|-.
T Consensus 221 Pl-g---------R~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 221 PV-G---------HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp TT-S---------SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CC-C---------CCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 11 1 134588899998887742 124689998877753
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.80 E-value=3.2e-09 Score=94.07 Aligned_cols=200 Identities=14% Similarity=0.102 Sum_probs=120.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC----------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~ 67 (360)
||..++++|++ +|++|++.+|+.... .....++. ++.+|++|+++++++++.+ . ++|.
T Consensus 17 IG~aia~~la~------~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~-~~~~Dvt~~~~v~~~~~~~~~~~g-~iDi 88 (264)
T d1spxa_ 17 IGRATAVLFAR------EGAKVTITGRHAERLEETRQQILAAGVSEQNVN-SVVADVTTDAGQDEILSTTLGKFG-KLDI 88 (264)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEE-EEECCTTSHHHHHHHHHHHHHHHS-CCCE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCCcCceE-EEEccCCCHHHHHHHHHHHHHHhC-CCCE
Confidence 79999999999 999999999974321 01224578 8999999999887776543 2 2899
Q ss_pred EEEeeeecCC-------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc-ccccccCCcccCCcC
Q 037566 68 LFWVMFQRLK-------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH-YMGPVFDPSLVGQLI 133 (360)
Q Consensus 68 V~h~A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v-Yg~~~~~~~~~g~~~ 133 (360)
++|.|+.... +.+..+++|+.|+.++.+++...++.. -.++|.++|+.. +.
T Consensus 89 lvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~S~~~~~~------------- 153 (264)
T d1spxa_ 89 LVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNISSIASGLH------------- 153 (264)
T ss_dssp EEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTTSSSS-------------
T ss_pred eecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc--cCcceeeeeeccccc-------------
Confidence 9999984210 234578999999999999987755422 235565555421 11
Q ss_pred CCCCCCCCCCCCCCCC-CCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCc-ch--hH-HHHHHHHHHH
Q 037566 134 GHDPPFKEDSLRLPFP-NFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSL-NN--SL-LTLAVYATIC 198 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p-~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~-~~--~~-~~~~~~~~~~ 198 (360)
+.| ...|+.+|..-+ ...|+.+..+.|+.|--+..... .. .. ........+.
T Consensus 154 -------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 220 (264)
T d1spxa_ 154 -------------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMK 220 (264)
T ss_dssp -------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHH
T ss_pred -------------cCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHH
Confidence 011 234877664322 45689999999998854321110 00 00 0000011111
Q ss_pred hhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC---CCCCCceeccCCCc
Q 037566 199 RHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD---RAKNQAFNCTNGDV 251 (360)
Q Consensus 199 ~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~---~~~g~~yni~~g~~ 251 (360)
...|+ | -+...+|+|+++++++..+ -..|+++.|.+|..
T Consensus 221 --~~~Pl---~---------R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s 262 (264)
T d1spxa_ 221 --ECVPA---G---------VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 262 (264)
T ss_dssp --HHCTT---S---------SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred --hcCCC---C---------CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence 11121 1 1345788999998877422 24689998866653
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.79 E-value=3.9e-09 Score=92.39 Aligned_cols=141 Identities=12% Similarity=-0.013 Sum_probs=100.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h 70 (360)
||.+++++|++ +|++|+..+|+.... .....++. .+.+|++|++++.++++ .... +|+++|
T Consensus 19 IG~~ia~~la~------~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~-~~~~Dvs~~~~v~~~~~~i~~~~g~-idilin 90 (244)
T d1yb1a_ 19 IGRLTAYEFAK------LKSKLVLWDINKHGLEETAAKCKGLGAKVH-TFVVDCSNREDIYSSAKKVKAEIGD-VSILVN 90 (244)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHTCC-CSEEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeeCCCHHHHHHHHHHHHHHcCC-CceeEe
Confidence 79999999999 999999999975321 01235688 89999999998877664 3333 899999
Q ss_pred eeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCC
Q 037566 71 VMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKE 141 (360)
Q Consensus 71 ~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E 141 (360)
.|+.... ..+.++++|+.|+.++.+++...|+.. +-.+||++||...+..
T Consensus 91 nag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~G~Iv~isS~~~~~~-------------------- 149 (244)
T d1yb1a_ 91 NAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGHVS-------------------- 149 (244)
T ss_dssp CCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC-CCC--------------------
T ss_pred eccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-CCceEEEeecchhcCC--------------------
Confidence 9985321 234678999999999999887655422 3468999988753310
Q ss_pred CCCCCCCCCCcHHHHHHHHh-------------cCCCCcEEEEcCCCe
Q 037566 142 DSLRLPFPNFYYAVEDIAAS-------------YSPAVTYSVHRSSII 176 (360)
Q Consensus 142 ~~p~~p~p~~~Y~~ek~l~e-------------~~~~~~~~ilRp~~v 176 (360)
.| ....|+.+|.... ...|+.+..+.|+.|
T Consensus 150 ----~~-~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v 192 (244)
T d1yb1a_ 150 ----VP-FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFV 192 (244)
T ss_dssp ----HH-HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHH
T ss_pred ----CC-CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCC
Confidence 01 0234887775422 125899999999766
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.78 E-value=3.3e-09 Score=93.33 Aligned_cols=202 Identities=10% Similarity=0.036 Sum_probs=124.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEEeeeecC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-FPSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFWVMFQRL 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h~A~~~~ 76 (360)
||..++++|++ +|++|++.+|+..... ....... +..+|++|.++++++++ ... ++|+++|.|+...
T Consensus 12 iG~aiA~~la~------~Ga~V~i~~r~~~~~~~~~~~~~~-~~~~dv~~~~~~~~~~~~~~~~~G-~iDiLVnNAg~~~ 83 (252)
T d1zmta1 12 GGMGSALRLSE------AGHTVACHDESFKQKDELEAFAET-YPQLKPMSEQEPAELIEAVTSAYG-QVDVLVSNDIFAP 83 (252)
T ss_dssp THHHHHHHHHH------TTCEEEECCGGGGSHHHHHHHHHH-CTTSEECCCCSHHHHHHHHHHHHS-CCCEEEEECCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHhhhCc-EEEeccCCHHHHHHHHHHHHHHcC-CCCEEEECCcCCC
Confidence 79999999999 9999999998654310 1112235 67889998877666554 223 2899999987421
Q ss_pred --C--------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCC
Q 037566 77 --K--------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRL 146 (360)
Q Consensus 77 --~--------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~ 146 (360)
. +.+..+++|+.++.++.+++...|+.. +-.++|++||...+.. .
T Consensus 84 ~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~IV~isS~~~~~~------------------------~ 138 (252)
T d1zmta1 84 EFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSATPFGP------------------------W 138 (252)
T ss_dssp CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCSTTTSC------------------------C
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-ccceeecccccccccc------------------------c
Confidence 1 234567999999999999887655422 2358999988753321 0
Q ss_pred CCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHH---HHHHHHHHHhhcCCCeeeeCCccc
Q 037566 147 PFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLL---TLAVYATICRHQGLPFRYLGNKYT 213 (360)
Q Consensus 147 p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~G~~~~ 213 (360)
| ....|+.+|..-+ ..+|+.+..+.|+.|-.+.......... .-.....+.+ ..|+ |
T Consensus 139 ~-~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~--~~pl---~---- 208 (252)
T d1zmta1 139 K-ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK--VTAL---Q---- 208 (252)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH--HSSS---S----
T ss_pred c-cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHh--cCCC---C----
Confidence 1 0234876664322 4678999999999987654322111100 0000111111 1222 1
Q ss_pred ccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCCc
Q 037566 214 WEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 251 (360)
Q Consensus 214 ~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~~ 251 (360)
=+...+|+|+++++++.... ..|+++.|.+|-.
T Consensus 209 -----R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 209 -----RLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP 243 (252)
T ss_dssp -----SCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred -----CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence 13457889999998875332 3489998876643
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.74 E-value=2.4e-08 Score=87.71 Aligned_cols=197 Identities=9% Similarity=0.018 Sum_probs=120.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|++.+|+.... ........ .+.+|++|+++++++++. .. ++|+++|.
T Consensus 22 IG~aiA~~la~------~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~iDilVnn 93 (256)
T d1ulua_ 22 LGFAIAAKLKE------AGAEVALSYQAERLRPEAEKLAEALGGAL-LFRADVTQDEELDALFAGVKEAFG-GLDYLVHA 93 (256)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSGGGHHHHHHHHHHTTCCE-EEECCTTCHHHHHHHHHHHHHHHS-SEEEEEEC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCcHHHHHHHHHhhhccCccc-ccccccCCHHHHHHHHHHHHHhcC-CceEEEec
Confidence 79999999999 999998888764321 00123566 899999999988777653 22 38999999
Q ss_pred eeecCC-------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 72 MFQRLK-------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 72 A~~~~~-------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
|+.... +....+++|+.++..+.+++...++ .=.++|++||......
T Consensus 94 ag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~---~~G~Iv~isS~~~~~~----------------- 153 (256)
T d1ulua_ 94 IAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLR---EGGGIVTLTYYASEKV----------------- 153 (256)
T ss_dssp CCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---EEEEEEEEECGGGTSB-----------------
T ss_pred cccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhc---cCCEEEEEeehHhcCC-----------------
Confidence 974211 1234679999999999998876543 1257899887643211
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYL 208 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (360)
.| ....|+.+|...+ ..+|+.+..+.|+.|.-+......... .....+.+ ..|+
T Consensus 154 -------~~-~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~---~~~~~~~~--~~pl--- 217 (256)
T d1ulua_ 154 -------VP-KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFT---KMYDRVAQ--TAPL--- 217 (256)
T ss_dssp -------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CH---HHHHHHHH--HSTT---
T ss_pred -------CC-CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhH---HHHHHHHh--cCCC---
Confidence 01 1335877664332 457899999999988765332211111 01111111 1232
Q ss_pred CCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 209 GNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 209 G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
| -+...+|+|+++++++... -..|+++.|.+|-.
T Consensus 218 ~---------R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 218 R---------RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH 253 (256)
T ss_dssp S---------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred C---------CCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence 1 1345788999988887432 23589888866643
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.74 E-value=4.4e-09 Score=91.82 Aligned_cols=143 Identities=10% Similarity=0.044 Sum_probs=99.8
Q ss_pred chHHHHHHHhcCCCCCCCCcE-------EEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHcc----CCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWK-------VYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSS----ISQ 63 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~-------V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~ 63 (360)
||.+++++|++ +|++ |+..+|+.... .....++. ++.+|++|+++++++++. ...
T Consensus 13 IG~aia~~la~------~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~-~~~~Dvt~~~~v~~~~~~~~~~~g~ 85 (240)
T d2bd0a1 13 IGRAIALEFAR------AARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD-TITADISDMADVRRLTTHIVERYGH 85 (240)
T ss_dssp HHHHHHHHHHH------HTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEE-EEECCTTSHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHH------hCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHHcCC
Confidence 79999999998 8886 78888864321 01234677 899999999988776643 332
Q ss_pred CccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCC
Q 037566 64 EVTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIG 134 (360)
Q Consensus 64 ~v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~ 134 (360)
+|.++|.|+.... +.+..+++|+.|+.++.+++...|+.. +-.++|++||.+.+..
T Consensus 86 -iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~~------------- 150 (240)
T d2bd0a1 86 -IDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATKA------------- 150 (240)
T ss_dssp -CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC-------------
T ss_pred -cceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-CCCceEEEechhhcCC-------------
Confidence 8999999985321 334578999999999999988765422 2358999988754321
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeee
Q 037566 135 HDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 135 ~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyG 178 (360)
. | ....|+.+|...+ ...|+.+..+.|+.|--
T Consensus 151 ----~-------~-~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T 192 (240)
T d2bd0a1 151 ----F-------R-HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYT 192 (240)
T ss_dssp ----C-------T-TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCS
T ss_pred ----C-------C-CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccC
Confidence 0 1 1334877664322 46789999999987743
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.71 E-value=3e-08 Score=86.68 Aligned_cols=202 Identities=9% Similarity=0.011 Sum_probs=127.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeecCC--
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLK-- 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~~~-- 77 (360)
||+++++.|++ +|++|++.+|++... .....+++ ....|+.+.+.+....+.+.. +|.++|+|+....
T Consensus 18 IG~aia~~la~------~G~~Vi~~~r~~~~l~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~-id~lVn~ag~~~~~~ 89 (245)
T d2ag5a1 18 IGQAAALAFAR------EGAKVIATDINESKLQELEKYPGIQ-TRVLDVTKKKQIDQFANEVER-LDVLFNVAGFVHHGT 89 (245)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHGGGGGSTTEE-EEECCTTCHHHHHHHHHHCSC-CSEEEECCCCCCCBC
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHhccCCc-eeeeecccccccccccccccc-ceeEEecccccCCCC
Confidence 79999999999 999999999975321 11245678 888999988888777776654 8999999985322
Q ss_pred -------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCC
Q 037566 78 -------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPN 150 (360)
Q Consensus 78 -------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~ 150 (360)
+....+++|+.++..+.+++...++.. +-.++|++||...- .. + .+ ..
T Consensus 90 ~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~g~Ii~isS~~~~----------------~~------~-~~-~~ 144 (245)
T d2ag5a1 90 VLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASS----------------VK------G-VV-NR 144 (245)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTT----------------TB------C-CT-TB
T ss_pred hhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-CCceeeeeechhhc----------------cC------C-cc-ch
Confidence 234578999999999999887643312 34578988775310 00 0 01 13
Q ss_pred CcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchh-HHHHHHHHHHHhhcCCCeeeeCCccccccccc
Q 037566 151 FYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNS-LLTLAVYATICRHQGLPFRYLGNKYTWEHFCD 219 (360)
Q Consensus 151 ~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d 219 (360)
..|+.+|..-+ ..+|+.+..+.|+.|-.|........ ...-.....+. ...|+ | -
T Consensus 145 ~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~~~pl---~---------R 210 (245)
T d2ag5a1 145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFL--KRQKT---G---------R 210 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHH--HTCTT---S---------S
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHH--hcCCC---C---------C
Confidence 45776664322 45789999999998866531110000 00000000111 11221 1 1
Q ss_pred ccCHHHHHHHHHHHHcCC--CCCCCceeccCCC
Q 037566 220 MSDSRVLAEQQIWAATTD--RAKNQAFNCTNGD 250 (360)
Q Consensus 220 ~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~ 250 (360)
+...+|+|+++.+++... ...|+++.|.+|-
T Consensus 211 ~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~ 243 (245)
T d2ag5a1 211 FATAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (245)
T ss_dssp CEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred CcCHHHHHHHHHHHhChhhCCCcCceEEeCCCc
Confidence 345778999998887532 2358998887664
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.71 E-value=9.6e-08 Score=84.59 Aligned_cols=198 Identities=13% Similarity=-0.005 Sum_probs=122.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||..++++|++ +|++|++.+|+..+. .....++. ++.+|++|++++.+.++.+ . ++|.++
T Consensus 30 IG~aia~~la~------~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~idilV 101 (272)
T d1g0oa_ 30 IGREMAMELGR------RGCKVIVNYANSTESAEEVVAAIKKNGSDAA-CVKANVGVVEDIVRMFEEAVKIFG-KLDIVC 101 (272)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCchHHHHHHHHHHHhhCCcee-eEeCCCCCHHHHHHHHHHHHHHhC-CCCccc
Confidence 79999999999 999999998875321 01234677 8999999999887776532 2 289999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|.|+.... +....+++|+.++.++++++...|+.. .++++++|+.... +
T Consensus 102 ~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~---g~~i~i~s~~~~~---------~---------- 159 (272)
T d1g0oa_ 102 SNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG---GRLILMGSITGQA---------K---------- 159 (272)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT---CEEEEECCGGGTC---------S----------
T ss_pred cccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc---ccccccccccccc---------c----------
Confidence 99884321 234578999999999999998876422 4666666542110 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC--------CC--CcchhHHHHHHHHHHHhh
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS--------SR--SLNNSLLTLAVYATICRH 200 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~--------~~--~~~~~~~~~~~~~~~~~~ 200 (360)
..+ ....|+.+|..-+ ...|+.+..+.|+.|-.+. .. .....- ........
T Consensus 160 ----~~~-~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--- 230 (272)
T d1g0oa_ 160 ----AVP-KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNE-EVDEYAAV--- 230 (272)
T ss_dssp ----SCS-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHH-HHHHHHHH---
T ss_pred ----ccc-chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchH-HHHHHHHH---
Confidence 001 1345776664322 4578999999998884321 00 000000 00000000
Q ss_pred cCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 201 QGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 201 ~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
...|+ | -+...+|+|.++++++.... ..|++..|.+|.
T Consensus 231 ~~~Pl---g---------R~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 231 QWSPL---R---------RVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp HSCTT---C---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ccCCC---C---------CCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 11221 1 24568899999998875322 358888887664
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.67 E-value=3.9e-07 Score=81.83 Aligned_cols=141 Identities=7% Similarity=-0.095 Sum_probs=95.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCC---C----------CCCceeeEeeccCChHHHHHHH----ccCCCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWF---P----------SSHVDHYITFDALDSTDTTQKL----SSISQE 64 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~---~----------~~~v~~~v~gDl~d~~~l~~~l----~~~~~~ 64 (360)
||..++++|++ +|++|++.+|+...... . ..... .+.+|+.|.+++++.+ +....
T Consensus 19 IG~aiA~~la~------~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~v~~~~~~~G~- 90 (302)
T d1gz6a_ 19 LGRAYALAFAE------RGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVKTALDTFGR- 90 (302)
T ss_dssp HHHHHHHHHHH------TTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHHHHHHHTSC-
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhccc-ccccccchHHHHHHHHHHHHHHcCC-
Confidence 79999999999 99999999886432100 0 11234 5778999987655544 34443
Q ss_pred ccEEEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCC
Q 037566 65 VTHLFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 65 v~~V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
+|.++|.|++... +.+..+++|+.|+.++.+++...|+.. +-.+||++||...+...
T Consensus 91 iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IV~isS~~~~~~~------------- 156 (302)
T d1gz6a_ 91 IDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIYGN------------- 156 (302)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCC-------------
T ss_pred CCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-CCcEEEEeCChhhcCCC-------------
Confidence 8999999985322 345678999999999999987765422 23589999886543110
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCe
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSII 176 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~v 176 (360)
| ....|+.+|..-. ..+|+.+..+-|+.+
T Consensus 157 -----------~-~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~ 195 (302)
T d1gz6a_ 157 -----------F-GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 195 (302)
T ss_dssp -----------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred -----------C-CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC
Confidence 1 1234877664322 457899999998654
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=5e-08 Score=87.16 Aligned_cols=143 Identities=18% Similarity=0.158 Sum_probs=97.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEE---ecCCCCC----------CCCCCCceeeEeeccCChHHHHHHHccCCC-CccE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGT---ARRPPPS----------WFPSSHVDHYITFDALDSTDTTQKLSSISQ-EVTH 67 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l---~r~~~~~----------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~-~v~~ 67 (360)
||.+++++|++ +|.+|+.+ .|+.... .....++. .+.+|++|++++.++++.+.. .+|+
T Consensus 14 IG~a~A~~la~------~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~g~idi 86 (285)
T d1jtva_ 14 IGLHLAVRLAS------DPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE-TLQLDVRDSKSVAAARERVTEGRVDV 86 (285)
T ss_dssp HHHHHHHHHHT------CTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEE-EEECCTTCHHHHHHHHHTCTTSCCSE
T ss_pred HHHHHHHHHHH------CCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceE-EEeccccchHhhhhhhhhccccchhh
Confidence 79999999998 88775444 3432111 11235678 899999999999888765421 4899
Q ss_pred EEEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCC
Q 037566 68 LFWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPP 138 (360)
Q Consensus 68 V~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p 138 (360)
+++.|+.... +....+++|+.|+.++.+++...|+.. +-.++|++||..... +
T Consensus 87 lvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-~~G~Iv~isS~~g~~-----------------~ 148 (285)
T d1jtva_ 87 LVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSVGGLM-----------------G 148 (285)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTS-----------------C
T ss_pred hhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-CCCceEEEechhhcC-----------------C
Confidence 9999874321 234578999999999999887654312 346899998864321 0
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCee
Q 037566 139 FKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIII 177 (360)
Q Consensus 139 ~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vy 177 (360)
.| ....|+.+|..-+ ...|+.+..+.|+.|-
T Consensus 149 -------~~-~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~ 189 (285)
T d1jtva_ 149 -------LP-FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVH 189 (285)
T ss_dssp -------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred -------CC-CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCC
Confidence 01 1335887775332 4578999999998874
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.64 E-value=7e-08 Score=84.92 Aligned_cols=198 Identities=10% Similarity=-0.028 Sum_probs=120.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~ 69 (360)
||.+++++|++ +|++|++..|+.... . ....++. .+.+|++|++++++.++. .. .+|+++
T Consensus 18 IG~aia~~la~------~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~idili 89 (259)
T d1ja9a_ 18 IGRGIAIELGR------RGASVVVNYGSSSKAAEEVVAELKKLGAQGV-AIQADISKPSEVVALFDKAVSHFG-GLDFVM 89 (259)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHHHHHS-CEEEEE
T ss_pred HHHHHHHHHHH------cCCEEEEEcCCChHHHHHHHHHHHHcCCCce-EecCCCCCHHHHHHHHHHHHHHcC-CCcEEE
Confidence 79999999999 999998877654321 0 1234677 899999999888776652 23 289999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccC-ccccccccCCcccCCcCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGT-KHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~-~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
|.|+.... +.+..+++|+.+..++++++...|+.. .+++.++|+ +.+. +
T Consensus 90 nnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---g~~iii~s~~~~~~-----------------~- 148 (259)
T d1ja9a_ 90 SNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSSIAAVMT-----------------G- 148 (259)
T ss_dssp CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE---EEEEEECCGGGTCC-----------------S-
T ss_pred eccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC---Cccccccccccccc-----------------C-
Confidence 99985321 234578999999999999998876422 355555443 2111 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecC--------C-CCcchhHHHHHHHHHHHhh
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGAS--------S-RSLNNSLLTLAVYATICRH 200 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~--------~-~~~~~~~~~~~~~~~~~~~ 200 (360)
.|. ...|+.+|..-+ ...|+.+..+.|+.|--+. . ........ -.+...+.
T Consensus 149 ------~~~-~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 218 (259)
T d1ja9a_ 149 ------IPN-HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQ-EKIDEGLA-- 218 (259)
T ss_dssp ------CCS-CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCH-HHHHHHHH--
T ss_pred ------CCC-chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCH-HHHHHHHH--
Confidence 011 234777664322 4568999999998874320 0 00000000 00111111
Q ss_pred cCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCCC--CCCCceeccCCC
Q 037566 201 QGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 250 (360)
Q Consensus 201 ~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~~--~~g~~yni~~g~ 250 (360)
...|+ .-+...+|+|+++++++.... ..|+...|.+|.
T Consensus 219 ~~~pl------------~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 219 NMNPL------------KRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp HTSTT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred hCCCC------------CCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 11222 124567889999998875432 358888886553
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.63 E-value=4.7e-08 Score=85.98 Aligned_cols=110 Identities=17% Similarity=-0.017 Sum_probs=79.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHL 68 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V 68 (360)
||.+++++|++ +|+.|++.+|++... .....++. ++.+|++|+++++++++.+ . .+|++
T Consensus 22 IG~aiA~~la~------~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~-~~~~Dls~~~~v~~~v~~~~~~~g-~iD~l 93 (257)
T d1xg5a_ 22 IGAAVARALVQ------QGLKVVGCARTVGNIEELAAECKSAGYPGTLI-PYRCDLSNEEDILSMFSAIRSQHS-GVDIC 93 (257)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHTTCSSEEE-EEECCTTCHHHHHHHHHHHHHHHC-CCSEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCCceEE-EEEccCCCHHHHHHHHHHHHHhcC-CCCEE
Confidence 79999999999 999999999875321 00124677 8999999999887766532 2 28999
Q ss_pred EEeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhcc-CCCCccEEEEeccCccc
Q 037566 69 FWVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNK-GRSRLRHVTLLMGTKHY 119 (360)
Q Consensus 69 ~h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~-~~~~v~r~v~~SS~~vY 119 (360)
+|.|+.... +.+..+++|+.|..++.+++.+.++ ...+-.++|++||.+.+
T Consensus 94 VnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~ 154 (257)
T d1xg5a_ 94 INNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH 154 (257)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGT
T ss_pred EecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhc
Confidence 999985321 2345789999999998888754322 12223689999887543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.59 E-value=2e-07 Score=81.29 Aligned_cols=148 Identities=14% Similarity=0.091 Sum_probs=97.2
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC------CCCCCceeeEeeccCChHHHHHHHccC------CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW------FPSSHVDHYITFDALDSTDTTQKLSSI------SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~------~~~~~v~~~v~gDl~d~~~l~~~l~~~------~~~v~~V~ 69 (360)
||..++++|++ ...+|+.|++.+|+..... ....++. ++.+|++|+++++++++.+ . .+|.++
T Consensus 14 IG~a~a~~l~~---~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dvs~~~~v~~~~~~i~~~~~~~-~iDiLv 88 (248)
T d1snya_ 14 LGLGLVKALLN---LPQPPQHLFTTCRNREQAKELEDLAKNHSNIH-ILEIDLRNFDAYDKLVADIEGVTKDQ-GLNVLF 88 (248)
T ss_dssp HHHHHHHHHHT---SSSCCSEEEEEESCTTSCHHHHHHHHHCTTEE-EEECCTTCGGGHHHHHHHHHHHHGGG-CCSEEE
T ss_pred HHHHHHHHHHH---HHhCCCEEEEEECCHHHHHHHHHHHhcCCcEE-EEEEEeccHHHHHHHHhhhHHHhhcC-CcceEE
Confidence 79999999973 0016999999999865421 1235788 9999999998887665522 2 389999
Q ss_pred EeeeecCC-------C---hhHhhhhhHHHHHHHHHHHHhhccC----------CCCccEEEEeccCccccccccCCccc
Q 037566 70 WVMFQRLK-------S---EEINISNNSTMFKNVMSVVVDSNKG----------RSRLRHVTLLMGTKHYMGPVFDPSLV 129 (360)
Q Consensus 70 h~A~~~~~-------~---~~~~~~vNv~gt~nll~a~~~~~~~----------~~~v~r~v~~SS~~vYg~~~~~~~~~ 129 (360)
+.|+.... + .+..+++|+.|+..+.+++...++. ..+-.++|.+||.. |..
T Consensus 89 nNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~--g~~------- 159 (248)
T d1snya_ 89 NNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL--GSI------- 159 (248)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG--GCS-------
T ss_pred eeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccc--ccc-------
Confidence 99985221 2 3347899999999998887543220 11245788887753 210
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCe
Q 037566 130 GQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSII 176 (360)
Q Consensus 130 g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~v 176 (360)
+ . ++.+ ....|+.+|.... ...|+.+..+.|+.|
T Consensus 160 ~-----~-------~~~~-~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v 203 (248)
T d1snya_ 160 Q-----G-------NTDG-GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWV 203 (248)
T ss_dssp T-----T-------CCSC-CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSB
T ss_pred C-----C-------CCCC-ChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcc
Confidence 0 0 0011 1335887775322 456899999999877
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.55 E-value=3.2e-07 Score=80.05 Aligned_cols=150 Identities=15% Similarity=0.086 Sum_probs=94.6
Q ss_pred chHHHHHHHhcCCCCCCCCc--EEEEEecCCCCC----CCCCCCceeeEeeccCChHHHHHHHccCC-----CCccEEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPW--KVYGTARRPPPS----WFPSSHVDHYITFDALDSTDTTQKLSSIS-----QEVTHLFW 70 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~--~V~~l~r~~~~~----~~~~~~v~~~v~gDl~d~~~l~~~l~~~~-----~~v~~V~h 70 (360)
||..++++|++ +|+ .|++..|+.... .....++. ++.+|++|.++++++++.+. .++|+++|
T Consensus 15 IG~a~a~~la~------~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~-~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilin 87 (250)
T d1yo6a1 15 IGLGLVQQLVK------DKNIRHIIATARDVEKATELKSIKDSRVH-VLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLIN 87 (250)
T ss_dssp HHHHHHHHHHT------CTTCCEEEEEESSGGGCHHHHTCCCTTEE-EEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEE
T ss_pred HHHHHHHHHHH------CCCCCEEEEEeCCHHHHHHHHHhhCCceE-EEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 79999999998 785 688888875432 12346788 99999999988876654321 02799999
Q ss_pred eeeecCC-------C---hhHhhhhhHHHHHHHHHHHHhhccCC--C--------CccEEEEeccCccccccccCCcccC
Q 037566 71 VMFQRLK-------S---EEINISNNSTMFKNVMSVVVDSNKGR--S--------RLRHVTLLMGTKHYMGPVFDPSLVG 130 (360)
Q Consensus 71 ~A~~~~~-------~---~~~~~~vNv~gt~nll~a~~~~~~~~--~--------~v~r~v~~SS~~vYg~~~~~~~~~g 130 (360)
.|+.... + .+..+++|+.|+.++.+++...++.. . ...+++..||...+-.
T Consensus 88 nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~--------- 158 (250)
T d1yo6a1 88 NAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT--------- 158 (250)
T ss_dssp CCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST---------
T ss_pred cCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc---------
Confidence 9985221 2 34578999999999988876433200 0 1234555554332211
Q ss_pred CcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCe
Q 037566 131 QLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSII 176 (360)
Q Consensus 131 ~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~v 176 (360)
.+... .+ ..|...|+.+|.... ...|+.+..+-|+.|
T Consensus 159 ------~~~~~-~~--~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v 205 (250)
T d1yo6a1 159 ------DNTSG-SA--QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV 205 (250)
T ss_dssp ------TCCST-TS--SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC
T ss_pred ------CCccc-cc--chhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCC
Confidence 01111 11 123445888775432 456899999988766
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.54 E-value=2e-07 Score=81.83 Aligned_cols=148 Identities=14% Similarity=0.002 Sum_probs=98.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCChHHHHHHHccC------C-CCc
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDSTDTTQKLSSI------S-QEV 65 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~~~l~~~l~~~------~-~~v 65 (360)
||..++++|.+ .-.+|++|++++|+.... .....++. ++.+|++|+++++++++.+ + ..+
T Consensus 18 IG~aiA~~lA~---~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~-~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~ 93 (259)
T d1oaaa_ 18 FGRALAPQLAR---LLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV-LAAADLGTEAGVQRLLSAVRELPRPEGLQR 93 (259)
T ss_dssp HHHHHHHHHHT---TBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEE-EEECCTTSHHHHHHHHHHHHHSCCCTTCCE
T ss_pred HHHHHHHHHHh---cccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE-EEEccCCCHHHHHHHHHHHHHhhhhccCce
Confidence 79999999952 001699999999975321 01134677 8999999999887776321 1 026
Q ss_pred cEEEEeeeecCC---------C---hhHhhhhhHHHHHHHHHHHHhhccCCCC-ccEEEEeccCccccccccCCcccCCc
Q 037566 66 THLFWVMFQRLK---------S---EEINISNNSTMFKNVMSVVVDSNKGRSR-LRHVTLLMGTKHYMGPVFDPSLVGQL 132 (360)
Q Consensus 66 ~~V~h~A~~~~~---------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~-v~r~v~~SS~~vYg~~~~~~~~~g~~ 132 (360)
+.+++.|+.... + .+..+++|+.|+.++.+++...++..++ -.++|++||...+.
T Consensus 94 ~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~------------ 161 (259)
T d1oaaa_ 94 LLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ------------ 161 (259)
T ss_dssp EEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS------------
T ss_pred EEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC------------
Confidence 788888874211 2 3457899999999999999887653322 45799998864321
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHh--------cCCCCcEEEEcCCCeee
Q 037566 133 IGHDPPFKEDSLRLPFPNFYYAVEDIAAS--------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 133 ~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e--------~~~~~~~~ilRp~~vyG 178 (360)
| .| ....|+.+|...+ +.+|+.+..+.|+.|-.
T Consensus 162 -----~-------~~-~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T 202 (259)
T d1oaaa_ 162 -----P-------YK-GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDN 202 (259)
T ss_dssp -----C-------CT-TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred -----C-------Cc-cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCC
Confidence 0 01 1335887765433 46789999999987754
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.43 E-value=8.7e-08 Score=85.12 Aligned_cols=142 Identities=15% Similarity=0.018 Sum_probs=96.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h~A~ 73 (360)
||++++++|++ +|++|++.+|++.... ....++. .+.+|++|+++++++++. .. .+|+++|.|+
T Consensus 17 IG~aia~~la~------~Ga~V~i~~r~~~~l~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g-~idilvnnAG 88 (276)
T d1bdba_ 17 LGRALVDRFVA------EGAKVAVLDKSAERLAELETDHGDNVL-GIVGDVRSLEDQKQAASRCVARFG-KIDTLIPNAG 88 (276)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHGGGEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEECCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHcCCCee-EEecccccHHHHHHHHHHHHHHhC-Cccccccccc
Confidence 79999999999 9999999999753210 0124677 899999999988776643 22 2899999998
Q ss_pred ecCC--------------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 74 QRLK--------------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 74 ~~~~--------------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
.... +.+..+++|+.|+.++.+++...|+.. + .++|++||+..+- +
T Consensus 89 ~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~-g~iI~i~S~~~~~-----------------~- 148 (276)
T d1bdba_ 89 IWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-R-GNVIFTISNAGFY-----------------P- 148 (276)
T ss_dssp CCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCGGGTS-----------------T-
T ss_pred ccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-C-CCceeeeechhcc-----------------C-
Confidence 4211 134578999999999999987655422 2 4678877653221 0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh---------cCCCCcEEEEcCCCeee
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS---------YSPAVTYSVHRSSIIIG 178 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e---------~~~~~~~~ilRp~~vyG 178 (360)
.| ....|+.+|..-+ ..+++.+..+.|+.|--
T Consensus 149 ------~~-~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T 189 (276)
T d1bdba_ 149 ------NG-GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINS 189 (276)
T ss_dssp ------TS-SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCS
T ss_pred ------CC-CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEec
Confidence 01 1234877664322 23459999999988853
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.42 E-value=1.2e-07 Score=84.18 Aligned_cols=106 Identities=15% Similarity=0.028 Sum_probs=79.8
Q ss_pred chHHHHHHHhcCCCCCCC-CcEEEEEecCCCCC-------CCCCCCceeeEeeccCChHHHHHHHccC----CCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGG-PWKVYGTARRPPPS-------WFPSSHVDHYITFDALDSTDTTQKLSSI----SQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~-g~~V~~l~r~~~~~-------~~~~~~v~~~v~gDl~d~~~l~~~l~~~----~~~v~~V~ 69 (360)
||..++++|++ + |+.|+..+|+.... .....+++ ++.+|++|.++++++++.+ . .+|.++
T Consensus 15 IG~a~A~~la~------~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dvs~~~sv~~~~~~~~~~~g-~iDiLV 86 (275)
T d1wmaa1 15 IGLAIVRDLCR------LFSGDVVLTARDVTRGQAAVQQLQAEGLSPR-FHQLDIDDLQSIRALRDFLRKEYG-GLDVLV 86 (275)
T ss_dssp HHHHHHHHHHH------HSSSEEEEEESSHHHHHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHHHHHHHS-SEEEEE
T ss_pred HHHHHHHHHHH------hCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEEecCCHHHHHHHHHHHHHhcC-CcEEEE
Confidence 79999999987 5 89999999975431 01245788 9999999999887765432 3 389999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH 118 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v 118 (360)
|.|++... +.+..+++|+.|+..+.+++...|+. =.|+|.+||...
T Consensus 87 nNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~ 141 (275)
T d1wmaa1 87 NNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMS 141 (275)
T ss_dssp ECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHH
T ss_pred EcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccce
Confidence 99985322 22346899999999999999887642 248999988654
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.38 E-value=1.4e-06 Score=75.08 Aligned_cols=103 Identities=12% Similarity=0.016 Sum_probs=71.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHc------cCCCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLS------SISQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~------~~~~~v~~V~h~A~~~ 75 (360)
||.+++++|++ +|++|++++|++... ..... .+.+|+.+.+......+ +.. ++|.++|.|+..
T Consensus 14 IG~aia~~l~~------~G~~V~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g-~iD~linnAG~~ 82 (235)
T d1ooea_ 14 LGSAILEFFKK------NGYTVLNIDLSANDQ---ADSNI-LVDGNKNWTEQEQSILEQTASSLQGS-QVDGVFCVAGGW 82 (235)
T ss_dssp HHHHHHHHHHH------TTEEEEEEESSCCTT---SSEEE-ECCTTSCHHHHHHHHHHHHHHHHTTC-CEEEEEECCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCchhc---ccccc-eeccccCchhHHHHHHHHHHHHhcCC-CeeEEEECCccc
Confidence 79999999999 999999999986542 12233 56677776554322211 122 389999999842
Q ss_pred C---C---C----hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCcc
Q 037566 76 L---K---S----EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKH 118 (360)
Q Consensus 76 ~---~---~----~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~v 118 (360)
. . + .+..+++|+.++.++.+++...++. + .++|++||...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~-g~Iv~isS~~~ 132 (235)
T d1ooea_ 83 AGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--G-GLLQLTGAAAA 132 (235)
T ss_dssp CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--E-EEEEEECCGGG
T ss_pred ccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--c-eEEEEeccHHh
Confidence 1 1 1 2346899999999999999887642 2 57999988643
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.38 E-value=6.5e-07 Score=79.90 Aligned_cols=202 Identities=9% Similarity=-0.033 Sum_probs=119.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------W--FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~--~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~ 69 (360)
||.+++++|++ +|++|++.+|+.... . .....+. .+.+|++|.+++.++++. .. .+|.++
T Consensus 37 IG~aiA~~la~------~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~-~~~~D~~~~~~v~~~~~~~~~~~g-~iDilv 108 (294)
T d1w6ua_ 37 LGKGMTTLLSS------LGAQCVIASRKMDVLKATAEQISSQTGNKVH-AIQCDVRDPDMVQNTVSELIKVAG-HPNIVI 108 (294)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHHSSCEE-EEECCTTCHHHHHHHHHHHHHHTC-SCSEEE
T ss_pred HHHHHHHHHHH------cCCEEEEEECCHHHHHHHHHHHHHhcCCceE-EEEecccChHHHHHHhhhhhhhcc-ccchhh
Confidence 79999999999 999999999985321 0 0134677 899999999988765542 22 389999
Q ss_pred EeeeecCC---------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK---------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~---------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
|.|+.... +....+.+|..+...+..++...+.....-..++..||...... .
T Consensus 109 nnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~---------------~--- 170 (294)
T d1w6ua_ 109 NNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG---------------S--- 170 (294)
T ss_dssp ECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC---------------C---
T ss_pred hhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc---------------c---
Confidence 99985322 23456788988888877665432111223445666655432110 0
Q ss_pred CCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCC
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGN 210 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 210 (360)
+ ....|+.+|..-+ ...|+.+..+.|+.|--+.......... ....... ...|+ |
T Consensus 171 ------~-~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~--~~~~~~~--~~~pl---~- 235 (294)
T d1w6ua_ 171 ------G-FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTG--TFEKEMI--GRIPC---G- 235 (294)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTS--HHHHHHH--TTCTT---S-
T ss_pred ------c-ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcH--HHHHHHh--hcCCC---C-
Confidence 1 1234776654322 4578999999999986653221111000 0011111 11222 1
Q ss_pred cccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCcc
Q 037566 211 KYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVF 252 (360)
Q Consensus 211 ~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~~ 252 (360)
-+...+|+|+++.+++... -..|++..|.+|..+
T Consensus 236 --------R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~l 271 (294)
T d1w6ua_ 236 --------RLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEV 271 (294)
T ss_dssp --------SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred --------CCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChhh
Confidence 1345788999998887432 245899988777643
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.26 E-value=4.7e-06 Score=71.78 Aligned_cols=138 Identities=12% Similarity=0.006 Sum_probs=91.0
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHH---Hc---cCCCCccEEEEeeeec
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQK---LS---SISQEVTHLFWVMFQR 75 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~---l~---~~~~~v~~V~h~A~~~ 75 (360)
||.+++++|++ +|++|.++++..... ..... .+..|..+.++..+. +. +.. ++|.++|+|+..
T Consensus 14 IG~a~a~~l~~------~G~~V~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~iD~lInnAG~~ 82 (236)
T d1dhra_ 14 LGSRCVQAFRA------RNWWVASIDVVENEE---ASASV-IVKMTDSFTEQADQVTAEVGKLLGDQ-KVDAILCVAGGW 82 (236)
T ss_dssp HHHHHHHHHHT------TTCEEEEEESSCCTT---SSEEE-ECCCCSCHHHHHHHHHHHHHHHHTTC-CEEEEEECCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCcccc---ccccc-eeecccCcHHHHHHHHHHHHHHhCCC-CceEEEECCccc
Confidence 79999999999 999999999876442 12233 556666655443322 21 112 279999999731
Q ss_pred C------C----ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCC
Q 037566 76 L------K----SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLR 145 (360)
Q Consensus 76 ~------~----~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~ 145 (360)
. . +.+..+++|+.++.++.+++...++. =.++|++||.+....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~------------------------ 135 (236)
T d1dhra_ 83 AGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDG------------------------ 135 (236)
T ss_dssp CCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSC------------------------
T ss_pred ccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHcCC------------------------
Confidence 1 1 12346899999999999999887642 257999988653210
Q ss_pred CCCCCCcHHHHHHHHh----------c--CCCCcEEEEcCCCeee
Q 037566 146 LPFPNFYYAVEDIAAS----------Y--SPAVTYSVHRSSIIIG 178 (360)
Q Consensus 146 ~p~p~~~Y~~ek~l~e----------~--~~~~~~~ilRp~~vyG 178 (360)
.| -...|+.+|...+ . ..|+.+..+.|+.|.-
T Consensus 136 ~~-~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T 179 (236)
T d1dhra_ 136 TP-GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDT 179 (236)
T ss_dssp CT-TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEEC
T ss_pred cc-CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcC
Confidence 01 1235888775443 2 3589999999987743
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.20 E-value=7.1e-06 Score=70.36 Aligned_cols=192 Identities=12% Similarity=0.046 Sum_probs=115.8
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEEeeeecC-
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFWVMFQRL- 76 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h~A~~~~- 76 (360)
||++++++|++ +|++|++.+|+... .+.. .+++|+.+......+... .. .+.+++.++...
T Consensus 13 IG~aiA~~la~------~Ga~V~i~~~~~~~-----~~~~-~~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 78 (241)
T d1uaya_ 13 LGRAAALALKA------RGYRVVVLDLRREG-----EDLI-YVEGDVTREEDVRRAVARAQEEAP--LFAVVSAAGVGLA 78 (241)
T ss_dssp HHHHHHHHHHH------HTCEEEEEESSCCS-----SSSE-EEECCTTCHHHHHHHHHHHHHHSC--EEEEEECCCCCCC
T ss_pred HHHHHHHHHHH------CCCEEEEEECCccc-----ccce-EeeccccchhhhHHHHHhhhcccc--ccchhhhhhcccc
Confidence 79999999999 99999999997643 3456 789999998765544331 21 344444443210
Q ss_pred ---------C---ChhHhhhhhHHHHHHHHHHHHhhcc-----CCCCccEEEEeccCccccccccCCcccCCcCCCCCCC
Q 037566 77 ---------K---SEEINISNNSTMFKNVMSVVVDSNK-----GRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPF 139 (360)
Q Consensus 77 ---------~---~~~~~~~vNv~gt~nll~a~~~~~~-----~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~ 139 (360)
. ..+..+++|+.+..+++.++...+. ...+-.++|++||...+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~------------------ 140 (241)
T d1uaya_ 79 EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG------------------ 140 (241)
T ss_dssp CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC------------------
T ss_pred ccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC------------------
Confidence 0 2345679999999888887654311 0113358999998754321
Q ss_pred CCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeC
Q 037566 140 KEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLG 209 (360)
Q Consensus 140 ~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 209 (360)
.| ....|+.+|..-+ ..+|+.+..+.|+.|--+...+.... ....+. ...|+ .|
T Consensus 141 ------~~-~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-----~~~~~~--~~~~~--~~ 204 (241)
T d1uaya_ 141 ------QI-GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK-----AKASLA--AQVPF--PP 204 (241)
T ss_dssp ------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH-----HHHHHH--TTCCS--SC
T ss_pred ------CC-CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhh-----HHHHHH--hcCCC--CC
Confidence 01 1234777664322 45789999999988854421111111 011111 12221 12
Q ss_pred CcccccccccccCHHHHHHHHHHHHcCCCCCCCceeccCCC
Q 037566 210 NKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGD 250 (360)
Q Consensus 210 ~~~~~~~~~d~~~v~dla~a~~~a~~~~~~~g~~yni~~g~ 250 (360)
. +...+|+|+++++++...-..|++..|.+|-
T Consensus 205 R---------~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~ 236 (241)
T d1uaya_ 205 R---------LGRPEEYAALVLHILENPMLNGEVVRLDGAL 236 (241)
T ss_dssp S---------CCCHHHHHHHHHHHHHCTTCCSCEEEESTTC
T ss_pred C---------CcCHHHHHHHHHHHHhCCCCCCCEEEECCcc
Confidence 1 2357889999888887554568999886664
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.17 E-value=1.8e-05 Score=68.64 Aligned_cols=197 Identities=7% Similarity=-0.035 Sum_probs=119.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h~ 71 (360)
||+++++.|++ +|++|++.+|+.... ........ .+..|+.+..++.+.++ ... .+|.++|.
T Consensus 19 IG~aiA~~l~~------~G~~V~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~v~~ 90 (258)
T d1qsga_ 19 IAYGIAQAMHR------EGAELAFTYQNDKLKGRVEEFAAQLGSDI-VLQCDVAEDASIDTMFAELGKVWP-KFDGFVHS 90 (258)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSTTTHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHHHHHTTCS-SEEEEEEC
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCHHHHHHHHHHHhhcCCcc-eeecccchHHHHHHHHHHhhhccc-ccceEEEe
Confidence 68999999999 999999999874321 00123456 78999999877655543 222 37899999
Q ss_pred eeecCC-----------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCC
Q 037566 72 MFQRLK-----------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 72 A~~~~~-----------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+.... . ......+|+.+...+..++...++ .-+.++++||.....
T Consensus 91 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Ii~iss~~~~~----------------- 150 (258)
T d1qsga_ 91 IGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN---PGSALLTLSYLGAER----------------- 150 (258)
T ss_dssp CCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECGGGTS-----------------
T ss_pred ecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCcEEEEecchhhcc-----------------
Confidence 874221 1 122457888888888888876532 224577777653210
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
+ .| ....|+.+|..-+ ..+|+.+..++|+.|.-+........- .....+.+ ..|+
T Consensus 151 ~-------~~-~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~--~~pl-- 215 (258)
T d1qsga_ 151 A-------IP-NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFR---KMLAHCEA--VTPI-- 215 (258)
T ss_dssp B-------CT-TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHH---HHHHHHHH--HSTT--
T ss_pred C-------CC-CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhh---hHHHHHHh--CCCC--
Confidence 0 01 1234777664333 457899999999999765322111111 11111111 1221
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCCc
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGDV 251 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~~ 251 (360)
| -+...+|+|+++++++.. ....|+++.+.+|-.
T Consensus 216 -~---------R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~ 251 (258)
T d1qsga_ 216 -R---------RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 251 (258)
T ss_dssp -S---------SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred -C---------CCcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence 1 134578899998888743 224589998877754
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.15 E-value=5.7e-06 Score=71.64 Aligned_cols=145 Identities=11% Similarity=-0.030 Sum_probs=93.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEEEeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW----FPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLFWVMF 73 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~----~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~h~A~ 73 (360)
||.+++++|++ +|++|++++|+..... ....... ....|+.+.+.+.+.... .. ..|.+++.+.
T Consensus 17 IG~aia~~la~------~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 88 (248)
T d2o23a1 17 LGLATAERLVG------QGASAVLLDLPNSGGEAQAKKLGNNCV-FAPADVTSEKDVQTALALAKGKFG-RVDVAVNCAG 88 (248)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECTTSSHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCChHHHHHHHHHhCCCcc-cccccccccccccccccccccccc-cccccccccc
Confidence 79999999999 9999999999865420 0124566 788999988765444321 11 1566666654
Q ss_pred ecC--------C-------ChhHhhhhhHHHHHHHHHHHHhhccC-----CCCccEEEEeccCccccccccCCcccCCcC
Q 037566 74 QRL--------K-------SEEINISNNSTMFKNVMSVVVDSNKG-----RSRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 74 ~~~--------~-------~~~~~~~vNv~gt~nll~a~~~~~~~-----~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
... + .....+++|+.++.++.+++...+.. ..+-.+||++||...+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~------------ 156 (248)
T d2o23a1 89 IAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG------------ 156 (248)
T ss_dssp CCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC------------
T ss_pred cccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC------------
Confidence 211 0 23356799999999999998654210 112247999988754321
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeec
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGA 179 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp 179 (360)
.| ....|+.+|...+ ..+|+.+..+.|+.+.-+
T Consensus 157 ------------~~-~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~ 199 (248)
T d2o23a1 157 ------------QV-GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 199 (248)
T ss_dssp ------------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC
T ss_pred ------------CC-CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecc
Confidence 01 1334877664333 456899999999887544
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.15 E-value=1.4e-06 Score=76.71 Aligned_cols=140 Identities=14% Similarity=0.082 Sum_probs=92.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeeccCChHHHHHHHcc----CCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS--------WFPSSHVDHYITFDALDSTDTTQKLSS----ISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~--------~~~~~~v~~~v~gDl~d~~~l~~~l~~----~~~~v~~V~ 69 (360)
||.+++++|++ +|++|++++|+.... ......+. .+.+|+.+.+.+....+. .. .+|.++
T Consensus 26 IG~aiA~~la~------~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~g-~~~~li 97 (269)
T d1xu9a_ 26 IGREMAYHLAK------MGAHVVVTARSKETLQKVVSHCLELGAASAH-YIAGTMEDMTFAEQFVAQAGKLMG-GLDMLI 97 (269)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHHHHHTCSEEE-EEECCTTCHHHHHHHHHHHHHHHT-SCSEEE
T ss_pred HHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHhhhhcccch-hhhhhhhhHHHHHHHHHHHHHHhC-Cccccc
Confidence 79999999999 999999999975321 01124566 889999988776554432 22 268888
Q ss_pred EeeeecCC------C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCCCCCCC
Q 037566 70 WVMFQRLK------S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFK 140 (360)
Q Consensus 70 h~A~~~~~------~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~ 140 (360)
+.|+.... + ....+++|+.|+.++.+++...++.. =.++|++||.+.+- +.
T Consensus 98 ~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~~-----------------~~- 157 (269)
T d1xu9a_ 98 LNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKV-----------------AY- 157 (269)
T ss_dssp ECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTS-----------------CC-
T ss_pred cccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhcC-----------------CC-
Confidence 88874221 2 23568999999999998887654322 24788888865321 00
Q ss_pred CCCCCCCCCCCcHHHHHHHHh------------cCCCCcEEEEcCCCe
Q 037566 141 EDSLRLPFPNFYYAVEDIAAS------------YSPAVTYSVHRSSII 176 (360)
Q Consensus 141 E~~p~~p~p~~~Y~~ek~l~e------------~~~~~~~~ilRp~~v 176 (360)
| ....|+.+|...+ +..++.+..+.|+.|
T Consensus 158 ------p-~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v 198 (269)
T d1xu9a_ 158 ------P-MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 198 (269)
T ss_dssp ------T-TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCB
T ss_pred ------C-CchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcC
Confidence 1 1345887765433 245688888988766
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.01 E-value=4.2e-05 Score=66.81 Aligned_cols=196 Identities=7% Similarity=-0.076 Sum_probs=108.5
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHc----cCCCCccEEEEe
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLS----SISQEVTHLFWV 71 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~----~~~~~v~~V~h~ 71 (360)
||.+++++|++ +|++|++.+|+.... ........ +...|+++.+++.++++ .... +|+++|.
T Consensus 19 IG~AiA~~la~------~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~g~-id~lV~n 90 (274)
T d2pd4a1 19 IAYGIAQSCFN------QGATLAFTYLNESLEKRVRPIAQELNSPY-VYELDVSKEEHFKSLYNSVKKDLGS-LDFIVHS 90 (274)
T ss_dssp HHHHHHHHHHT------TTCEEEEEESSTTTHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHHHHHHHTSC-EEEEEEC
T ss_pred HHHHHHHHHHH------CCCEEEEEeCCHHHHHHHHHHHhhCCcee-EeeecccchhhHHHHHHHHHHHcCC-CCeEEee
Confidence 79999999999 999999999975321 00124556 88999999987666553 3333 8999999
Q ss_pred eeecCC----------ChhHhh---hhhHHHHHHHHHHHHhhccCCCCccE-EEEeccCccccccccCCcccCCcCCCCC
Q 037566 72 MFQRLK----------SEEINI---SNNSTMFKNVMSVVVDSNKGRSRLRH-VTLLMGTKHYMGPVFDPSLVGQLIGHDP 137 (360)
Q Consensus 72 A~~~~~----------~~~~~~---~vNv~gt~nll~a~~~~~~~~~~v~r-~v~~SS~~vYg~~~~~~~~~g~~~~~~~ 137 (360)
|+.... ....+. .++......+...+.+. . +-.+ ++..||.+..+.
T Consensus 91 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~i~~~s~~~~~~~---------------- 150 (274)
T d2pd4a1 91 VAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPL---L-NNGASVLTLSYLGSTKY---------------- 150 (274)
T ss_dssp CCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG---E-EEEEEEEEEECGGGTSB----------------
T ss_pred cccccccccccccccccchhhhhhhccccccccccccccccc---c-ccCcceeeecccccccc----------------
Confidence 874221 111222 22233344444444333 1 2233 444444322110
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcCCCeee
Q 037566 138 PFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRY 207 (360)
Q Consensus 138 p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
.+ ...+|+.+|...+ ...|+++..+.|+.+.-+........-. ......+ ..|+
T Consensus 151 --------~~-~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~---~~~~~~~--~~p~-- 214 (274)
T d2pd4a1 151 --------MA-HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRM---ILKWNEI--NAPL-- 214 (274)
T ss_dssp --------CT-TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHH---HHHHHHH--HSTT--
T ss_pred --------cc-cchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHH---HHHHHhh--hhhc--
Confidence 01 1334665553222 4678999999998886543222111111 1111111 1121
Q ss_pred eCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 208 LGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 208 ~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
+ -+...+|+|+++++++... -..|+++.|.+|-.
T Consensus 215 -~---------r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~ 250 (274)
T d2pd4a1 215 -R---------KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH 250 (274)
T ss_dssp -S---------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -c---------CCcCHHHHHHHHHHHhChhhCCCcCceEEECCChh
Confidence 1 1345888999988877532 23589998876653
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.97 E-value=5.4e-05 Score=66.36 Aligned_cols=198 Identities=11% Similarity=0.036 Sum_probs=110.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----------C---------------CCCCCceeeEeeccCChHHHH
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----------W---------------FPSSHVDHYITFDALDSTDTT 55 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----------~---------------~~~~~v~~~v~gDl~d~~~l~ 55 (360)
||.+++++|++ +|++|++.+|+.... . .....+. ...+|+++.++++
T Consensus 14 IG~aiA~~la~------~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~dv~~~~~v~ 86 (284)
T d1e7wa_ 14 LGRSIAEGLHA------EGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGA-DGSAPVTLFTRCA 86 (284)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC-----CCCBCHHHHHH
T ss_pred HHHHHHHHHHH------cCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccc-cccccCCCHHHHH
Confidence 79999999999 999999887764210 0 0011233 4567799988887
Q ss_pred HHHccC----CCCccEEEEeeeecCC------Ch-----------------hHhhhhhHHHHHHHHHHHHhhcc-----C
Q 037566 56 QKLSSI----SQEVTHLFWVMFQRLK------SE-----------------EINISNNSTMFKNVMSVVVDSNK-----G 103 (360)
Q Consensus 56 ~~l~~~----~~~v~~V~h~A~~~~~------~~-----------------~~~~~vNv~gt~nll~a~~~~~~-----~ 103 (360)
++++.+ . ++|+++|.|+.... +. ...+.+|+.+...+.+++.+.+. .
T Consensus 87 ~~~~~~~~~~G-~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 165 (284)
T d1e7wa_ 87 ELVAACYTHWG-RCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKH 165 (284)
T ss_dssp HHHHHHHHHHS-CCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGG
T ss_pred HHHHHHHHHhC-CCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHh
Confidence 776422 2 28999999985321 00 12568899999888887643200 0
Q ss_pred CCCccEEEEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcC
Q 037566 104 RSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRS 173 (360)
Q Consensus 104 ~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp 173 (360)
..+-.+++..||..... | .+ ....|+.+|...+ ...|+.+..+.|
T Consensus 166 ~~~~~~ii~~~s~~~~~-----------------~-------~~-~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~P 220 (284)
T d1e7wa_ 166 RGTNYSIINMVDAMTNQ-----------------P-------LL-GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP 220 (284)
T ss_dssp SCSCEEEEEECCTTTTS-----------------C-------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred cCCCCcccccccccccC-----------------C-------cc-ceeeeccccccchhhhHHHHHHhCCcccccccccc
Confidence 11234566665542211 0 01 1234776664322 456899999988
Q ss_pred CCeeecCCCCcchhHHHHHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 174 SIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 174 ~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
+.+--.. . ++. ....... ...|+ .|. +...+|+|+++++++... -..|+++.|.+|-.
T Consensus 221 G~t~~~~--~-~~~----~~~~~~~--~~~pl--~~R---------~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~s 280 (284)
T d1e7wa_ 221 GLSVLVD--D-MPP----AVWEGHR--SKVPL--YQR---------DSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 280 (284)
T ss_dssp SSBCCGG--G-SCH----HHHHHHH--TTCTT--TTS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ccccccc--c-CCH----HHHHHHH--hcCCC--CCC---------CCCHHHHHHHHHHHhCchhcCccCCeEEECcChh
Confidence 7532111 1 111 1111111 12221 121 345788999998887432 23589998877755
Q ss_pred c
Q 037566 252 F 252 (360)
Q Consensus 252 ~ 252 (360)
+
T Consensus 281 l 281 (284)
T d1e7wa_ 281 L 281 (284)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.93 E-value=0.00015 Score=62.80 Aligned_cols=202 Identities=8% Similarity=-0.007 Sum_probs=110.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHHH-------ccCCCCccEEE
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQKL-------SSISQEVTHLF 69 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~l-------~~~~~~v~~V~ 69 (360)
||.+++++|.+ +|++|+..+|+.... .....+.. .+.+|+++.+++..++ ...+. +|.++
T Consensus 20 IG~aiA~~la~------~Ga~Vil~~~~~~~~~~~~~~~~~~~~~-~~~~dv~~~~~~~~~~~~v~~~~~~~~~-ld~~i 91 (268)
T d2h7ma1 20 IAFHIARVAQE------QGAQLVLTGFDRLRLIQRITDRLPAKAP-LLELDVQNEEHLASLAGRVTEAIGAGNK-LDGVV 91 (268)
T ss_dssp HHHHHHHHHHH------TTCEEEEEECSCHHHHHHHHTTSSSCCC-EEECCTTCHHHHHHHHHHHHHHHCTTCC-EEEEE
T ss_pred HHHHHHHHHHH------cCCEEEEEeCChHHHHHHHHHHcCCcee-eEeeecccccccccccchhhhccccCCC-cceee
Confidence 79999999999 999999998865321 11234567 8999999987654443 33343 89999
Q ss_pred EeeeecCC-----------Chh---HhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcCCC
Q 037566 70 WVMFQRLK-----------SEE---INISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGH 135 (360)
Q Consensus 70 h~A~~~~~-----------~~~---~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~~~ 135 (360)
|.|+.... +.. ..+.+|+........++.... +-..++..+|...+.
T Consensus 92 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~s~~~~~--------------- 152 (268)
T d2h7ma1 92 HSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIM----NPGGSIVGMDFDPSR--------------- 152 (268)
T ss_dssp ECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE----EEEEEEEEEECCCSS---------------
T ss_pred ecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhc----ccccccccccccccc---------------
Confidence 99984211 111 234666666666666665441 222344443332111
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCC----Ccch--hHHHHHHHHHHHh
Q 037566 136 DPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSR----SLNN--SLLTLAVYATICR 199 (360)
Q Consensus 136 ~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~----~~~~--~~~~~~~~~~~~~ 199 (360)
. .|. ...|+.+|...+ ...|+.+..+.|+.|--+... .... .......+.....
T Consensus 153 ~---------~p~-~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (268)
T d2h7ma1 153 A---------MPA-YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 222 (268)
T ss_dssp C---------CTT-THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHH
T ss_pred c---------Ccc-cchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHH
Confidence 0 011 234776554332 456899999999887543100 0000 0000000000000
Q ss_pred hcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCCcc
Q 037566 200 HQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGDVF 252 (360)
Q Consensus 200 ~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~~~ 252 (360)
...|+ + +-+...+|+|+++++++.. ....|++..|.+|...
T Consensus 223 -~~~pl---~--------rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~ 265 (268)
T d2h7ma1 223 -QRAPI---G--------WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265 (268)
T ss_dssp -HHCTT---C--------CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred -hcCCC---C--------CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence 11121 1 1234577899988888742 2235898888777643
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.63 E-value=0.00022 Score=63.99 Aligned_cols=103 Identities=9% Similarity=-0.014 Sum_probs=64.6
Q ss_pred eccCChHHHHHHHc----cCCCCccEEEEeeeecC----C-------ChhHhhhhhHHHHHHHHHHHHhhccCCCCccEE
Q 037566 46 FDALDSTDTTQKLS----SISQEVTHLFWVMFQRL----K-------SEEINISNNSTMFKNVMSVVVDSNKGRSRLRHV 110 (360)
Q Consensus 46 gDl~d~~~l~~~l~----~~~~~v~~V~h~A~~~~----~-------~~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~ 110 (360)
.|+++.++++++++ ... ++|+++|.|+... + +....+++|+.++..+.+++...|+. -.++
T Consensus 92 ~d~~~~~~~~~~~~~~~~~~G-~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~---~GsI 167 (329)
T d1uh5a_ 92 YNMLQNYTIEDVANLIHQKYG-KINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP---QSSI 167 (329)
T ss_dssp HHTCCCCSHHHHHHHHHHHHC-CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEE
T ss_pred hhhhhHHHHHHHHHHHHHHhC-CCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc---cccc
Confidence 46667655554443 222 2899999987421 1 23456799999999999999887642 2468
Q ss_pred EEeccCccccccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------c-CCCCcEEEEcCCCe
Q 037566 111 TLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------Y-SPAVTYSVHRSSII 176 (360)
Q Consensus 111 v~~SS~~vYg~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~-~~~~~~~ilRp~~v 176 (360)
|.+||.+... + .|....+|+.+|...+ . .+|+.+-.+.|+.|
T Consensus 168 v~iss~~~~~-----------------~-------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i 220 (329)
T d1uh5a_ 168 ISLTYHASQK-----------------V-------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL 220 (329)
T ss_dssp EEEECGGGTS-----------------C-------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred ccceeehhcc-----------------c-------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcc
Confidence 8887654221 0 1122345876664332 1 35899999999866
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.56 E-value=0.00079 Score=58.99 Aligned_cols=142 Identities=8% Similarity=-0.035 Sum_probs=79.1
Q ss_pred ccEEEEeeeecC----C----C---hhHhhhhhHHHHHHHHHHHHhhccCCCCccEEEEeccCccccccccCCcccCCcC
Q 037566 65 VTHLFWVMFQRL----K----S---EEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLI 133 (360)
Q Consensus 65 v~~V~h~A~~~~----~----~---~~~~~~vNv~gt~nll~a~~~~~~~~~~v~r~v~~SS~~vYg~~~~~~~~~g~~~ 133 (360)
+|+++|.|+... + + ....+++|+.++.++++++...++ .=.+.+.+++++.....
T Consensus 120 iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~----------- 185 (297)
T d1d7oa_ 120 IDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN---PGGASISLTYIASERII----------- 185 (297)
T ss_dssp EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECGGGTSCC-----------
T ss_pred CcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhh---cCCcceeeeehhhcccc-----------
Confidence 899999998521 1 2 335779999999999999876532 11234444444322110
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHH---------Hh--cCCCCcEEEEcCCCeeecCCCCcchhHHHHHHHHHHHhhcC
Q 037566 134 GHDPPFKEDSLRLPFPNFYYAVEDIA---------AS--YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQG 202 (360)
Q Consensus 134 ~~~~p~~E~~p~~p~p~~~Y~~ek~l---------~e--~~~~~~~~ilRp~~vyGp~~~~~~~~~~~~~~~~~~~~~~~ 202 (360)
.+ ....|...|.. .| ..+++.+..+.|+.+.-+....... .. .......+ .
T Consensus 186 ------------~~-~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~-~~--~~~~~~~~--~ 247 (297)
T d1d7oa_ 186 ------------PG-YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF-ID--TMIEYSYN--N 247 (297)
T ss_dssp ------------TT-CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH-HH--HHHHHHHH--H
T ss_pred ------------cc-cccceecccccccccccccchhccccceEEecccccccccchhhhhccC-CH--HHHHHHHh--C
Confidence 01 12235544422 22 2358999999999987764332111 11 11111111 1
Q ss_pred CCeeeeCCcccccccccccCHHHHHHHHHHHHcC--CCCCCCceeccCCC
Q 037566 203 LPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATT--DRAKNQAFNCTNGD 250 (360)
Q Consensus 203 ~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~--~~~~g~~yni~~g~ 250 (360)
.|+ | -+...+|+|.++++++.. .-..|+++.|.+|-
T Consensus 248 ~Pl---g---------R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 248 API---Q---------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp SSS---C---------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred CCC---C---------CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 232 2 134578899998888742 22358988886664
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=97.20 E-value=0.0031 Score=53.94 Aligned_cols=197 Identities=12% Similarity=0.073 Sum_probs=103.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeeccCCh----HHHHHH----HccCCCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS---------WFPSSHVDHYITFDALDS----TDTTQK----LSSISQE 64 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~---------~~~~~~v~~~v~gDl~d~----~~l~~~----l~~~~~~ 64 (360)
||..++++|++ +|++|+.++|+.... ......+. .+..|+.+. +.+.+. .+....
T Consensus 13 IG~aia~~la~------~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 84 (266)
T d1mxha_ 13 IGHSIAVRLHQ------QGFRVVVHYRHSEGAAQRLVAELNAARAGSAV-LCKGDLSLSSSLLDCCEDIIDCSFRAFGR- 84 (266)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE-EEECCCSSSTTHHHHHHHHHHHHHHHHSC-
T ss_pred HHHHHHHHHHH------CCCEEEEEECCchHHHHHHHHHHHhhcCCceE-EEecccccchhHHHHHHHHHHHHHHHhCC-
Confidence 79999999999 999999999875321 00123445 666666543 333332 222222
Q ss_pred ccEEEEeeeecCCC--------------------hhHhhhhhHHHHHHHHHHHHhhcc----CCCCccEEEEeccCcccc
Q 037566 65 VTHLFWVMFQRLKS--------------------EEINISNNSTMFKNVMSVVVDSNK----GRSRLRHVTLLMGTKHYM 120 (360)
Q Consensus 65 v~~V~h~A~~~~~~--------------------~~~~~~vNv~gt~nll~a~~~~~~----~~~~v~r~v~~SS~~vYg 120 (360)
+|.++|.|+..... ....+.+|..+...........+. .......++.+||.....
T Consensus 85 iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (266)
T d1mxha_ 85 CDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDL 164 (266)
T ss_dssp CCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGS
T ss_pred CCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccccc
Confidence 79999999853210 112345565555554444433210 000122333333322110
Q ss_pred ccccCCcccCCcCCCCCCCCCCCCCCCCCCCcHHHHHHHHh----------cCCCCcEEEEcCCCeeecCCCCcchhHHH
Q 037566 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDIAAS----------YSPAVTYSVHRSSIIIGASSRSLNNSLLT 190 (360)
Q Consensus 121 ~~~~~~~~~g~~~~~~~p~~E~~p~~p~p~~~Y~~ek~l~e----------~~~~~~~~ilRp~~vyGp~~~~~~~~~~~ 190 (360)
..| ....|+.+|..-+ ...|+.+..+.|+.+.-+.... ..
T Consensus 165 ------------------------~~~-~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~--~~--- 214 (266)
T d1mxha_ 165 ------------------------PLP-GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP--QE--- 214 (266)
T ss_dssp ------------------------CCT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC--HH---
T ss_pred ------------------------cCc-chhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC--HH---
Confidence 001 1334766664322 4568999999998876542211 11
Q ss_pred HHHHHHHHhhcCCCeeeeCCcccccccccccCHHHHHHHHHHHHcCC--CCCCCceeccCCCc
Q 037566 191 LAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDV 251 (360)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~d~~~v~dla~a~~~a~~~~--~~~g~~yni~~g~~ 251 (360)
....+. ...|+ |. -+...+|+|+++++++... -..|++++|.+|-.
T Consensus 215 --~~~~~~--~~~pl---~r--------~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~ 262 (266)
T d1mxha_ 215 --TQEEYR--RKVPL---GQ--------SEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 262 (266)
T ss_dssp --HHHHHH--TTCTT---TS--------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred --HHHHHH--hcCCC---CC--------CCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence 111111 12221 11 1235788999999888532 24589998866643
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=96.77 E-value=0.0075 Score=51.16 Aligned_cols=81 Identities=14% Similarity=0.085 Sum_probs=55.7
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeeccCChHHHHHHH----ccCCCCccEEEEeeeecCC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKL----SSISQEVTHLFWVMFQRLK 77 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~~~~~~v~~~v~gDl~d~~~l~~~l----~~~~~~v~~V~h~A~~~~~ 77 (360)
||.+++++|++ +|++|++++|+..+ ...|+.+........ ......+|.+++.|+....
T Consensus 13 IG~aiA~~la~------~Ga~V~~~~~~~~~-----------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~ 75 (257)
T d1fjha_ 13 IGAATRKVLEA------AGHQIVGIDIRDAE-----------VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ 75 (257)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSSSS-----------EECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTT
T ss_pred HHHHHHHHHHH------CCCEEEEEECChHH-----------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCc
Confidence 79999999999 99999999986431 345777765544332 2221137899999985432
Q ss_pred --ChhHhhhhhHHHHHHHHHHHHh
Q 037566 78 --SEEINISNNSTMFKNVMSVVVD 99 (360)
Q Consensus 78 --~~~~~~~vNv~gt~nll~a~~~ 99 (360)
.......+|..+...+.++...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~ 99 (257)
T d1fjha_ 76 TKVLGNVVSVNYFGATELMDAFLP 99 (257)
T ss_dssp CSSHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3455667888888877776543
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=96.40 E-value=0.00035 Score=57.55 Aligned_cols=62 Identities=13% Similarity=0.076 Sum_probs=50.4
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeee
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS------WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~------~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~ 74 (360)
||..++++|++ .|++|++++|+.... .....++. ...+|+.|.+++.+++.+ +|.|||+|+.
T Consensus 35 IG~~ia~~la~------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~----iDilin~Ag~ 102 (191)
T d1luaa1 35 VGMRSAALLAG------EGAEVVLCGRKLDKAQAAADSVNKRFKVN-VTAAETADDASRAEAVKG----AHFVFTAGAI 102 (191)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHHHHHHTCC-CEEEECCSHHHHHHHTTT----CSEEEECCCT
T ss_pred HHHHHHHHHHh------hccchhhcccchHHHHHHHHHHHhccchh-hhhhhcccHHHHHHHhcC----cCeeeecCcc
Confidence 79999999999 999999999985331 01124567 889999999999999887 5799999885
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=93.28 E-value=0.021 Score=43.19 Aligned_cols=53 Identities=11% Similarity=0.093 Sum_probs=40.9
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeeccCChHHHHHH-HccC
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-WFPSSHVDHYITFDALDSTDTTQK-LSSI 61 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-~~~~~~v~~~v~gDl~d~~~l~~~-l~~~ 61 (360)
+|+++++.|.+ .|++|++++.++... ........ .+.||.+|++.+.++ ++.+
T Consensus 11 ~G~~la~~L~~------~g~~vvvid~d~~~~~~~~~~~~~-~~~gd~~~~~~l~~a~i~~a 65 (134)
T d2hmva1 11 FGGSIVKELHR------MGHEVLAVDINEEKVNAYASYATH-AVIANATEENELLSLGIRNF 65 (134)
T ss_dssp HHHHHHHHHHH------TTCCCEEEESCHHHHHHTTTTCSE-EEECCTTCTTHHHHHTGGGC
T ss_pred HHHHHHHHHHH------CCCeEEEecCcHHHHHHHHHhCCc-ceeeecccchhhhccCCccc
Confidence 69999999999 899999999875331 11234567 888999999988876 5554
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.96 E-value=0.39 Score=36.61 Aligned_cols=89 Identities=12% Similarity=0.047 Sum_probs=57.4
Q ss_pred CchHHHHHHHhcCCCCCCCCc--EEEEEecCCCCC---CCCCCCceeeEeeccCChHHHHHHHccCCCCccEEEEeeeec
Q 037566 1 MAGLSLAEALKNNPTIPGGPW--KVYGTARRPPPS---WFPSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQR 75 (360)
Q Consensus 1 ~iG~~lv~~Ll~~~~~~~~g~--~V~~l~r~~~~~---~~~~~~v~~~v~gDl~d~~~l~~~l~~~~~~v~~V~h~A~~~ 75 (360)
.+|++++-.|.. +|. +++.++..+... .+.+.........- ....+..++++++ |.|+-+|+..
T Consensus 11 ~VG~~~A~~l~~------~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~-~~~~~~~~~~~~a----DivVitag~~ 79 (144)
T d1mlda1 11 GIGQPLSLLLKN------SPLVSRLTLYDIAHTPGVAADLSHIETRATVKGY-LGPEQLPDCLKGC----DVVVIPAGVP 79 (144)
T ss_dssp TTHHHHHHHHHT------CTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEE-ESGGGHHHHHTTC----SEEEECCSCC
T ss_pred hHHHHHHHHHHh------CCccceEEEEeccccchhhHHHhhhhhhcCCCeE-EcCCChHHHhCCC----CEEEECCCcC
Confidence 379999998887 554 588888654221 01111111012222 2345667788886 5777788742
Q ss_pred C---CChhHhhhhhHHHHHHHHHHHHhh
Q 037566 76 L---KSEEINISNNSTMFKNVMSVVVDS 100 (360)
Q Consensus 76 ~---~~~~~~~~vNv~gt~nll~a~~~~ 100 (360)
. .+..+.++.|+...+.+++++.+.
T Consensus 80 ~~~g~sR~~ll~~N~~i~~~i~~~i~~~ 107 (144)
T d1mlda1 80 RKPGMTRDDLFNTNATIVATLTAACAQH 107 (144)
T ss_dssp CCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 2 356788999999999999999998
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=90.64 E-value=0.025 Score=42.77 Aligned_cols=49 Identities=12% Similarity=-0.008 Sum_probs=38.6
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCCC-C-CCCCceeeEeeccCChHHHHHH
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPSW-F-PSSHVDHYITFDALDSTDTTQK 57 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~~-~-~~~~v~~~v~gDl~d~~~l~~~ 57 (360)
+|++|++.|.+ .|++|+++++++.... . ...++. .+.||.+|++.+.++
T Consensus 11 ~G~~la~~L~~------~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~ 61 (132)
T d1lssa_ 11 VGYTLAKSLSE------KGHDIVLIDIDKDICKKASAEIDAL-VINGDCTKIKTLEDA 61 (132)
T ss_dssp HHHHHHHHHHH------TTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSHHHHHHT
T ss_pred HHHHHHHHHHH------CCCCcceecCChhhhhhhhhhhhhh-hccCcccchhhhhhc
Confidence 69999999998 8999999998764210 0 113678 899999999988876
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=85.64 E-value=0.14 Score=39.45 Aligned_cols=49 Identities=16% Similarity=0.052 Sum_probs=38.3
Q ss_pred chHHHHHHHhcCCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeeccCChHHHHHH
Q 037566 2 AGLSLAEALKNNPTIPGGPWKVYGTARRPPPS-----WFPSSHVDHYITFDALDSTDTTQK 57 (360)
Q Consensus 2 iG~~lv~~Ll~~~~~~~~g~~V~~l~r~~~~~-----~~~~~~v~~~v~gDl~d~~~l~~~ 57 (360)
+|..+++.|.+ .|++|++++..+... .....++. ++.||.+|++.|+++
T Consensus 14 ~g~~l~~~L~~------~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~d~~~L~~a 67 (153)
T d1id1a_ 14 LAINTILQLNQ------RGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKA 67 (153)
T ss_dssp HHHHHHHHHHH------TTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHH
T ss_pred HHHHHHHHHHH------cCCCEEEEeccchhHHHHHHHhhcCCcE-EEEccCcchHHHHHh
Confidence 58899999999 899999998765321 11235788 999999999988775
|