Citrus Sinensis ID: 037622


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560
MEKFLQTFSSERINTSQWYSPETGIYHSKHPSVNLPANDSLLDVDSFIFSHKHNGRTALVDSLSGYSISYPQLFPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAGKFDLVERPVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKGLCGNSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNTKKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRKFLTSKL
cHHHHcccccccccccccccccccEEEccccccccccccccccHHHHHHHccccccEEEEEcccccEEcHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHccccEEEcccccccHHHHHHHHHHcccEEEEEEccHHHHHHHHccccccEEEccccccccccccccccHHHHHccccccccccccccccEEEEEccccccccccEEEEccHHHHHHHHHHHHHHHccccccccccEEEEEccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHcccEEcccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccccccEEEEEEccccccccccccEEEEEEccccHHcccccHHHHHHcccccccccccccEEEcccccEEEEccccHHHHccccccccHHHHHHHHHcccccEEEEEcccccccccEEEEEEEccccccccHHHHHHHHHHcccccccccEEEEEccccccccHHHHHHHHHHHHHccc
ccccHHHHHHHHHHHcccccccHHEcccccccccccccccccHHHHHHHHHccccccEEEEcccccEEEHHHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHcccEEEEEcccHHHHHHHHHccccEEEEEEEEccccccccccccHHHHHHccccccccccccccccEEEEEcccccccccEEEEEcccEEEEEEEEEEcccccccccccccEEEEEEcEEEEcccHHEEEccHHcccEEEEEccccHHHHHHHHHHcccEEEcccHHHHHHHHHcccccccccHHHHHEHccccccccHHHHHHHHHHcccccEEccccEcccccEEEcccccccccccccccccccccEEEEEccccccccccccEEEEEEEcccccccccccHHHHHHHEcccccEEEEEEEEEcccccEEEEEEHHHcEEEccEEEcHHHHHHHHcccccEEEEEEEEEEEcccEEEEEEEEEEcccccccHHHHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHHccc
MEKFLQTFSSerintsqwyspetgiyhskhpsvnlpandslldvdsfifshkhngrTALVdslsgysisypqlFPLVQSVASglrhhfgisqGDAVLLllpnsiyfPVIFLALLYLGAivipmnpllsvSEIKKQVTLCKTKISLAFTIYENVDKlrswgttpvvavpenlvndfkegrfsdfHKLIAgkfdlverpvirqqDTAAILYSsgttgaskgaelthgnFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYGLSLFALGllslgpsvvVMRRFEASEMLKVIDKYgvthfpvvpPILMALTKAAKGLcgnslkslkqvssgaapanskiiedfvgafphvdfiqgygmtestavgtrgfntkKFSKYFSVgllapniqaKVVDwvngcflppgstgelwlrgpgtMKEYinnadatmstidkegwlhtgdiayfdedgYLYIVDRLKEVIkyngyqispadletvlichpeiLDVAVTGAMDKVLGEIPVAFVVrrdgstltEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRKFLTSKL
mekflqtfsserintsqwYSPETGIYHSKHPSVNLPANDSLLDVDSFIFSHKHNGRTALVDSLSGYSISYPQLFPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAgkfdlverpVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKGLCGNSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNTKKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLGEIPVAFVVRRDGSTLTEAAVIDylaqrvapykkvrrvvftksipksaagkvlrRELRKFLTSKL
MEKFLQTFSSERINTSQWYSPETGIYHSKHPSVNLPANDSLLDVDSFIFSHKHNGRTALVDSLSGYSISYPQLFPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAGKFDLVERPVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYglslfalgllslgpsvvvMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKGLCGNSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNTKKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRKFLTSKL
*****************WYSPETGIYHS****VNLPANDSLLDVDSFIFSHKHNGRTALVDSLSGYSISYPQLFPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAGKFDLVERPVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKGLCGNSLKSL*********ANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNTKKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSA***V*************
**********************TGIYHSKHPSVNLPANDSLLDVDSFIFSHKHNGRTALVDSLSGYSISYPQLFPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAG*F******VIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKGLCGNSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNTKKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRKF*TS**
**********ERINTSQWYSPETGIYHSKHPSVNLPANDSLLDVDSFIFSHKHNGRTALVDSLSGYSISYPQLFPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAGKFDLVERPVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKGLCGNSLKSL*********ANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNTKKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRKFLTSKL
**KFLQTFSSERINTSQWYSPETGIYHSKHPSVNLPANDSLLDVDSFIFSHKHNGRTALVDSLSGYSISYPQLFPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAGKFDLVERPVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKGLCGNSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNTKKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRKFLTS**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEKFLQTFSSERINTSQWYSPETGIYHSKHPSVNLPANDSLLDVDSFIFSHKHNGRTALVDSLSGYSISYPQLFPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAGKFDLVERPVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKGLCGNSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNTKKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRKFLTSKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query560 2.2.26 [Sep-21-2011]
Q84P24566 4-coumarate--CoA ligase-l yes no 0.966 0.955 0.615 0.0
Q6YYZ2591 4-coumarate--CoA ligase-l yes no 0.964 0.913 0.530 1e-145
Q336M7583 4-coumarate--CoA ligase-l yes no 0.828 0.795 0.539 1e-127
Q84P21546 4-coumarate--CoA ligase-l no no 0.955 0.979 0.425 1e-124
Q10S72552 4-coumarate--CoA ligase-l yes no 0.962 0.976 0.435 1e-122
Q84P25565 4-coumarate--CoA ligase-l no no 0.951 0.943 0.410 1e-120
P0C5B6550 4-coumarate--CoA ligase-l no no 0.95 0.967 0.400 1e-115
Q9M0X9544 4-coumarate--CoA ligase-l no no 0.939 0.966 0.426 1e-113
Q84P23562 4-coumarate--CoA ligase-l no no 0.958 0.955 0.413 1e-113
Q3E6Y4552 4-coumarate--CoA ligase-l no no 0.953 0.967 0.394 1e-111
>sp|Q84P24|4CLL6_ARATH 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2 Back     alignment and function desciption
 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/549 (61%), Positives = 428/549 (77%), Gaps = 8/549 (1%)

Query: 14  NTSQWYSPETGIYHSKHPSVNLPANDSLLDVDSFIFSHKHNGRTALVDSLSGYSISYPQL 73
           N   W+S +TGIY SK PS++LP  D  LD  S +FSHKH+G TAL+DSL+G+SIS+ +L
Sbjct: 20  NPPFWFSSKTGIYTSKFPSLHLPV-DPNLDAVSALFSHKHHGDTALIDSLTGFSISHTEL 78

Query: 74  FPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIK 133
             +VQS+A+G+ H  G+ QGD V L+LPNS+YFP+IFL+L+ LGAIV  MNP  S+ EIK
Sbjct: 79  QIMVQSMAAGIYHVLGVRQGDVVSLVLPNSVYFPMIFLSLISLGAIVTTMNPSSSLGEIK 138

Query: 134 KQVTLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSD--FHKLIAGKF 191
           KQV+ C   + LAFT  ENV+KL S G + V++V E+   DF   R  +  F+ ++   F
Sbjct: 139 KQVSECS--VGLAFTSTENVEKLSSLGVS-VISVSESY--DFDSIRIENPKFYSIMKESF 193

Query: 192 DLVERPVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVF 251
             V +P+I+Q D AAI+YSSGTTGASKG  LTH N IA++ELFVRFEASQYEY  S  V+
Sbjct: 194 GFVPKPLIKQDDVAAIMYSSGTTGASKGVLLTHRNLIASMELFVRFEASQYEYPGSSNVY 253

Query: 252 LAVLPMFHIYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALT 311
           LA LP+ HIYGLSLF +GLLSLG ++VVM+RF+AS+++ VI+++ +THFPVVPP+LMALT
Sbjct: 254 LAALPLCHIYGLSLFVMGLLSLGSTIVVMKRFDASDVVNVIERFKITHFPVVPPMLMALT 313

Query: 312 KAAKGLCGNSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNT 371
           K AKG+CG   KSLKQVSSGAAP + K IEDF+   PHVD IQGYGMTESTAVGTRGFN+
Sbjct: 314 KKAKGVCGEVFKSLKQVSSGAAPLSRKFIEDFLQTLPHVDLIQGYGMTESTAVGTRGFNS 373

Query: 372 KKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTID 431
           +K S+Y SVGLLAPN+QAKVVDW +G FLPPG+ GELW++GPG MK Y+NN  AT  +I 
Sbjct: 374 EKLSRYSSVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIV 433

Query: 432 KEGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAM 491
           ++ WL TGDIAYFDEDGYL+IVDR+KE+IKY G+QI+PADLE VL+ HP I+D AVT A 
Sbjct: 434 EDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAP 493

Query: 492 DKVLGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRE 551
           ++  GEIPVAFVVRR  +TL+E  VI Y+A +VAPY+KVR+VV   SIPKS  GK+LR+E
Sbjct: 494 NEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKE 553

Query: 552 LRKFLTSKL 560
           L++ LT+ +
Sbjct: 554 LKRILTNSV 562





Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|Q6YYZ2|4CLL3_ORYSJ 4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp. japonica GN=4CLL3 PE=2 SV=1 Back     alignment and function description
>sp|Q336M7|4CLL2_ORYSJ 4-coumarate--CoA ligase-like 2 OS=Oryza sativa subsp. japonica GN=4CLL2 PE=2 SV=3 Back     alignment and function description
>sp|Q84P21|4CLL5_ARATH 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2 Back     alignment and function description
>sp|Q10S72|4CLL4_ORYSJ 4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1 Back     alignment and function description
>sp|Q84P25|4CLL2_ARATH 4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2 Back     alignment and function description
>sp|P0C5B6|4CLL4_ARATH 4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1 Back     alignment and function description
>sp|Q9M0X9|4CLL7_ARATH 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7 PE=1 SV=1 Back     alignment and function description
>sp|Q84P23|4CLL9_ARATH 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2 Back     alignment and function description
>sp|Q3E6Y4|4CLL3_ARATH 4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana GN=4CLL3 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query560
356497603545 PREDICTED: 4-coumarate--CoA ligase-like 0.960 0.987 0.661 0.0
224074401544 4-coumarate-coa ligase [Populus trichoca 0.969 0.998 0.661 0.0
224074393557 acyl:coa ligase [Populus trichocarpa] gi 0.969 0.974 0.646 0.0
357484743555 4-coumarate-CoA ligase [Medicago truncat 0.967 0.976 0.647 0.0
225463242571 PREDICTED: 4-coumarate--CoA ligase-like 0.962 0.943 0.631 0.0
449453328577 PREDICTED: 4-coumarate--CoA ligase-like 0.975 0.946 0.625 0.0
29888152566 4-coumarate-CoA ligase-like protein [Ara 0.966 0.955 0.617 0.0
357474283542 4-coumarate CoA ligase [Medicago truncat 0.928 0.959 0.633 0.0
15234087566 4-coumarate--CoA ligase-like 6 [Arabidop 0.966 0.955 0.615 0.0
26449818566 putative 4-coumarate-CoA ligase [Arabido 0.966 0.955 0.615 0.0
>gi|356497603|ref|XP_003517649.1| PREDICTED: 4-coumarate--CoA ligase-like 6-like [Glycine max] Back     alignment and taxonomy information
 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/544 (66%), Positives = 438/544 (80%), Gaps = 6/544 (1%)

Query: 17  QWYSPETGIYHSKHPSVNLPANDSLLDVDSFIFSHKHNGRTALVDSLSGYSISYPQLFPL 76
            W+SP++GIYHSKH  V+LP ND  LD+ SFIFSH+HNG +ALVDS SG SISYP+L PL
Sbjct: 8   HWFSPKSGIYHSKHAPVDLP-NDPFLDLVSFIFSHRHNGVSALVDSSSGCSISYPKLLPL 66

Query: 77  VQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQV 136
           V+SVASGL H  G+SQGD VLLLLPNSIY+P++FLA+LY+GAIV P+NPL SV EI++QV
Sbjct: 67  VKSVASGL-HRMGVSQGDVVLLLLPNSIYYPIVFLAVLYIGAIVTPLNPLSSVYEIRRQV 125

Query: 137 TLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAGKFDLVER 196
           + C   +SLAFT+ EN  KL   G + V+AVPEN     K+G FS F  LI+  FDL +R
Sbjct: 126 SECG--VSLAFTVPENEKKLEPLGIS-VIAVPEN-EKGLKDGCFSCFCDLISCDFDLPKR 181

Query: 197 PVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLP 256
           PVI+Q DTA ILYSSGTTG SKG  L+H N +A VELFVRFEASQYE      V+LAVLP
Sbjct: 182 PVIKQDDTAGILYSSGTTGVSKGVVLSHKNLVAMVELFVRFEASQYEGSCLRNVYLAVLP 241

Query: 257 MFHIYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKG 316
           MFH+YGLSLFA+GLLSLG +VVVMR+F+  E+++VID+Y VTHFPVVPP+L AL K AKG
Sbjct: 242 MFHVYGLSLFAVGLLSLGSTVVVMRKFDIDEVVRVIDEYKVTHFPVVPPMLTALIKRAKG 301

Query: 317 LCGNSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNTKKFSK 376
           + G   +SL QVSSGAAP +  +I +F+ AFP+VDFIQGYGMTESTAVGTRGFNT+KF  
Sbjct: 302 VNGGEFQSLVQVSSGAAPLSMGVINEFIRAFPNVDFIQGYGMTESTAVGTRGFNTEKFRN 361

Query: 377 YFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWL 436
           Y S+GLLAPN++AKVVDW  G FLPPGS+GEL LRGP  M  Y+NN + TMSTIDK+GWL
Sbjct: 362 YSSIGLLAPNMEAKVVDWNTGAFLPPGSSGELRLRGPSIMTGYLNNEEVTMSTIDKDGWL 421

Query: 437 HTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLG 496
           HTGD+ YFD DGYL+I DRLK++IKY G+QI+PADLE VLI HPE++DVAVT AMD+  G
Sbjct: 422 HTGDVVYFDHDGYLHISDRLKDIIKYKGFQIAPADLEAVLILHPEVVDVAVTRAMDEETG 481

Query: 497 EIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRKFL 556
           EIPVAFVVR+ GS L+   ++D++A++VAPYKKVR+V FT  IP+SA GK+LR++LR +L
Sbjct: 482 EIPVAFVVRKVGSVLSPKHIMDFVAEQVAPYKKVRKVFFTDKIPRSATGKILRKQLRNYL 541

Query: 557 TSKL 560
           TS L
Sbjct: 542 TSNL 545




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074401|ref|XP_002304364.1| 4-coumarate-coa ligase [Populus trichocarpa] gi|222841796|gb|EEE79343.1| 4-coumarate-coa ligase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224074393|ref|XP_002304363.1| acyl:coa ligase [Populus trichocarpa] gi|222841795|gb|EEE79342.1| acyl:coa ligase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357484743|ref|XP_003612659.1| 4-coumarate-CoA ligase [Medicago truncatula] gi|355513994|gb|AES95617.1| 4-coumarate-CoA ligase [Medicago truncatula] Back     alignment and taxonomy information
>gi|225463242|ref|XP_002270360.1| PREDICTED: 4-coumarate--CoA ligase-like 6 [Vitis vinifera] gi|296083381|emb|CBI23270.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449453328|ref|XP_004144410.1| PREDICTED: 4-coumarate--CoA ligase-like 6-like [Cucumis sativus] gi|449500076|ref|XP_004160997.1| PREDICTED: 4-coumarate--CoA ligase-like 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|29888152|gb|AAP03017.1| 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357474283|ref|XP_003607426.1| 4-coumarate CoA ligase [Medicago truncatula] gi|355508481|gb|AES89623.1| 4-coumarate CoA ligase [Medicago truncatula] Back     alignment and taxonomy information
>gi|15234087|ref|NP_193636.1| 4-coumarate--CoA ligase-like 6 [Arabidopsis thaliana] gi|158564048|sp|Q84P24.2|4CLL6_ARATH RecName: Full=4-coumarate--CoA ligase-like 6; AltName: Full=4-coumarate--CoA ligase isoform 7; Short=At4CL7 gi|2832629|emb|CAA16758.1| 4-coumarate-CoA ligase-like [Arabidopsis thaliana] gi|7268695|emb|CAB78903.1| 4-coumarate-CoA ligase-like [Arabidopsis thaliana] gi|36312875|gb|AAQ86592.1| 4-coumarate CoA ligase isoform 7 [Arabidopsis thaliana] gi|332658725|gb|AEE84125.1| 4-coumarate--CoA ligase-like 6 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|26449818|dbj|BAC42032.1| putative 4-coumarate-CoA ligase [Arabidopsis thaliana] gi|29028936|gb|AAO64847.1| At4g19010 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query560
TAIR|locus:2117209566 AT4G19010 [Arabidopsis thalian 0.966 0.955 0.591 6.4e-170
TAIR|locus:2034392546 OPCL1 "OPC-8:0 CoA ligase1" [A 0.955 0.979 0.409 8.1e-108
TAIR|locus:2034423565 AT1G20480 [Arabidopsis thalian 0.951 0.943 0.396 3.2e-104
TAIR|locus:2115673544 AT4G05160 [Arabidopsis thalian 0.939 0.966 0.417 4.7e-103
TAIR|locus:2158559562 AT5G63380 [Arabidopsis thalian 0.957 0.953 0.411 6.2e-101
TAIR|locus:2034403550 AT1G20500 [Arabidopsis thalian 0.932 0.949 0.395 3.9e-99
TAIR|locus:2176662550 4CL8 [Arabidopsis thaliana (ta 0.960 0.978 0.379 3.7e-96
TAIR|locus:2017602561 4CL1 "4-coumarate:CoA ligase 1 0.944 0.942 0.377 6.9e-86
TAIR|locus:2094771570 4CL5 "4-coumarate:CoA ligase 5 0.932 0.915 0.378 2.4e-85
TAIR|locus:2094716556 4CL2 "4-coumarate:CoA ligase 2 0.932 0.938 0.372 5.6e-84
TAIR|locus:2117209 AT4G19010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1652 (586.6 bits), Expect = 6.4e-170, P = 6.4e-170
 Identities = 325/549 (59%), Positives = 412/549 (75%)

Query:    14 NTSQWYSPETGIYHSKHPSVNLPANDSLLDVDSFIFSHKHNGRTALVDSLSGYSISYPQL 73
             N   W+S +TGIY SK PS++LP  D  LD  S +FSHKH+G TAL+DSL+G+SIS+ +L
Sbjct:    20 NPPFWFSSKTGIYTSKFPSLHLPV-DPNLDAVSALFSHKHHGDTALIDSLTGFSISHTEL 78

Query:    74 FPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIK 133
               +VQS+A+G+ H  G+ QGD V L+LPNS+YFP+IFL+L+ LGAIV  MNP  S+ EIK
Sbjct:    79 QIMVQSMAAGIYHVLGVRQGDVVSLVLPNSVYFPMIFLSLISLGAIVTTMNPSSSLGEIK 138

Query:   134 KQVTLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSD--FHKLIAGKF 191
             KQV+ C   + LAFT  ENV+KL S G + V++V E+   DF   R  +  F+ ++   F
Sbjct:   139 KQVSECS--VGLAFTSTENVEKLSSLGVS-VISVSESY--DFDSIRIENPKFYSIMKESF 193

Query:   192 DLVERPVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVF 251
               V +P+I+Q D AAI+YSSGTTGASKG  LTH N IA++ELFVRFEASQYEY  S  V+
Sbjct:   194 GFVPKPLIKQDDVAAIMYSSGTTGASKGVLLTHRNLIASMELFVRFEASQYEYPGSSNVY 253

Query:   252 LAVLPMFHIYXXXXXXXXXXXXXXXXXXMRRFEASEMLKVIDKYGVTHFPVVPPILMALT 311
             LA LP+ HIY                  M+RF+AS+++ VI+++ +THFPVVPP+LMALT
Sbjct:   254 LAALPLCHIYGLSLFVMGLLSLGSTIVVMKRFDASDVVNVIERFKITHFPVVPPMLMALT 313

Query:   312 KAAKGLCGNSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNT 371
             K AKG+CG   KSLKQVSSGAAP + K IEDF+   PHVD IQGYGMTESTAVGTRGFN+
Sbjct:   314 KKAKGVCGEVFKSLKQVSSGAAPLSRKFIEDFLQTLPHVDLIQGYGMTESTAVGTRGFNS 373

Query:   372 KKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTID 431
             +K S+Y SVGLLAPN+QAKVVDW +G FLPPG+ GELW++GPG MK Y+NN  AT  +I 
Sbjct:   374 EKLSRYSSVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIV 433

Query:   432 KEGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAM 491
             ++ WL TGDIAYFDEDGYL+IVDR+KE+IKY G+QI+PADLE VL+ HP I+D AVT A 
Sbjct:   434 EDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAP 493

Query:   492 DKVLGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRE 551
             ++  GEIPVAFVVRR  +TL+E  VI Y+A +VAPY+KVR+VV   SIPKS  GK+LR+E
Sbjct:   494 NEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKE 553

Query:   552 LRKFLTSKL 560
             L++ LT+ +
Sbjct:   554 LKRILTNSV 562




GO:0003824 "catalytic activity" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016207 "4-coumarate-CoA ligase activity" evidence=ISS
GO:0006914 "autophagy" evidence=RCA
GO:0009610 "response to symbiotic fungus" evidence=RCA
TAIR|locus:2034392 OPCL1 "OPC-8:0 CoA ligase1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034423 AT1G20480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115673 AT4G05160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2158559 AT5G63380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034403 AT1G20500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176662 4CL8 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017602 4CL1 "4-coumarate:CoA ligase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2094771 4CL5 "4-coumarate:CoA ligase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2094716 4CL2 "4-coumarate:CoA ligase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q54P774CL1_DICDI6, ., 2, ., 1, ., 1, 20.34050.9250.9401yesno
P94547LCFA_BACSU6, ., 2, ., 1, ., 30.30610.81070.8107yesno
Q10S724CLL4_ORYSJ6, ., 2, ., 1, ., -0.43580.96250.9764yesno
Q84P244CLL6_ARATH6, ., 2, ., 1, ., -0.61560.96600.9558yesno
Q336M74CLL2_ORYSJ6, ., 2, ., 1, ., -0.53930.82850.7958yesno
Q6YYZ24CLL3_ORYSJ6, ., 2, ., 1, ., -0.53090.96420.9137yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
ACLL18
acyl-coa ligase (EC-6.2.1.12) (544 aa)
(Populus trichocarpa)
Predicted Functional Partners:
PAL
RecName- Full=Phenylalanine ammonia-lyase; EC=4.3.1.24;; This is a key enzyme of plant metaboli [...] (715 aa)
       0.681
PAL2
SubName- Full=Phenylalanine ammonia-lyase; (712 aa)
       0.681
PAL3
SubName- Full=Phenylalanine ammonia-lyase; (715 aa)
       0.681
PAL5
SubName- Full=Phenylalanine ammonia-lyase; (712 aa)
       0.647
CCR5
cinnamoyl CoA reductase (EC-1.2.1.44) (230 aa)
       0.510
f5h
SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa)
       0.510
CCR1
cinnamoyl CoA reductase (EC-1.2.1.44) (278 aa)
       0.510
CHI1
SubName- Full=Putative uncharacterized protein; (224 aa)
       0.510
CHS
SubName- Full=Chalcone synthase (Putative uncharacterized protein);; The primary product of thi [...] (397 aa)
       0.508
CCR
SubName- Full=Cinnamoyl CoA reductase; (339 aa)
       0.508

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 0.0
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 0.0
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 1e-155
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 1e-149
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 1e-138
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 1e-135
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 1e-114
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 1e-111
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 1e-111
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 1e-109
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 1e-105
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 1e-101
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 1e-99
PLN02330546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 2e-99
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 1e-93
PRK05605573 PRK05605, PRK05605, long-chain-fatty-acid--CoA lig 7e-88
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 5e-87
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 1e-85
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 5e-82
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 1e-81
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 1e-78
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 6e-77
cd12119517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 4e-76
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 6e-76
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 1e-75
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 5e-75
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 7e-75
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 3e-74
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 2e-71
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 1e-70
PRK08974560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 2e-66
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 3e-66
PRK05677562 PRK05677, PRK05677, long-chain-fatty-acid--CoA lig 5e-66
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 8e-66
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 1e-65
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 3e-65
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 6e-64
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 2e-63
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 2e-62
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 1e-61
PRK06145497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 2e-61
PRK07529632 PRK07529, PRK07529, AMP-binding domain protein; Va 3e-61
cd05944359 cd05944, FACL_like_4, Uncharacterized subfamily of 2e-60
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 3e-59
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 5e-59
PRK12492562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 1e-58
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 1e-58
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 5e-58
PRK08751560 PRK08751, PRK08751, putative long-chain fatty acyl 1e-57
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 4e-57
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 7e-57
TIGR03205541 TIGR03205, pimA, dicarboxylate--CoA ligase PimA 9e-56
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 1e-54
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 7e-54
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 2e-53
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 3e-53
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 8e-53
COG1022613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 3e-52
PRK07787471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 4e-52
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 4e-52
PRK13391511 PRK13391, PRK13391, acyl-CoA synthetase; Provision 1e-51
PLN02860563 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase 4e-51
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 6e-51
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 1e-50
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 4e-50
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 1e-49
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 8e-49
PRK086331146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 6e-48
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 3e-47
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 5e-47
PRK07470528 PRK07470, PRK07470, acyl-CoA synthetase; Validated 6e-47
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 9e-47
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 1e-46
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 5e-46
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 6e-46
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 1e-45
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 1e-45
PRK08162545 PRK08162, PRK08162, acyl-CoA synthetase; Validated 4e-43
cd05928530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 4e-43
cd05927539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 5e-41
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 2e-40
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 3e-40
PRK07638487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 5e-40
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 1e-39
cd05910455 cd05910, FACL_like_1, Uncharacterized subfamily of 3e-39
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 4e-39
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 6e-39
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 1e-38
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 4e-38
PRK10946536 PRK10946, entE, enterobactin synthase subunit E; P 6e-38
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 9e-38
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 1e-37
PRK06164540 PRK06164, PRK06164, acyl-CoA synthetase; Validated 3e-37
cd05924365 cd05924, FACL_like_5, Uncharacterized subfamily of 3e-37
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 4e-37
PLN02479567 PLN02479, PLN02479, acetate-CoA ligase 7e-37
PRK13382537 PRK13382, PRK13382, acyl-CoA synthetase; Provision 1e-36
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 8e-36
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 8e-35
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 1e-34
cd05967607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 1e-34
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 1e-34
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 7e-34
PRK07008539 PRK07008, PRK07008, long-chain-fatty-acid--CoA lig 9e-34
PRK13383516 PRK13383, PRK13383, acyl-CoA synthetase; Provision 4e-33
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 1e-32
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 1e-32
PRK13390501 PRK13390, PRK13390, acyl-CoA synthetase; Provision 2e-32
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 4e-32
PRK07798533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 8e-31
PRK05620576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 2e-30
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 2e-30
PRK13388540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 3e-30
cd05915509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 5e-29
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 2e-28
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 5e-28
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 2e-26
PRK07768545 PRK07768, PRK07768, long-chain-fatty-acid--CoA lig 8e-26
PRK06060 705 PRK06060, PRK06060, acyl-CoA synthetase; Validated 8e-25
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 1e-24
PRK09192579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 7e-24
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 2e-23
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 7e-23
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 1e-22
PLN02736651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 3e-22
PRK07824358 PRK07824, PRK07824, O-succinylbenzoic acid--CoA li 4e-22
cd05914448 cd05914, FACL_like_3, Uncharacterized subfamily of 5e-22
PRK00174637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 2e-21
PLN02614666 PLN02614, PLN02614, long-chain acyl-CoA synthetase 1e-20
PLN02654666 PLN02654, PLN02654, acetate-CoA ligase 3e-20
TIGR02316628 TIGR02316, propion_prpE, propionate--CoA ligase 4e-20
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 4e-20
PTZ00237647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 7e-20
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 7e-20
cd05938535 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport 1e-19
PRK10524629 PRK10524, prpE, propionyl-CoA synthetase; Provisio 1e-19
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 7e-19
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 1e-18
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 2e-18
cd05933594 cd05933, ACSBG_like, Bubblegum-like very long-chai 9e-18
cd05939474 cd05939, hsFATP4_like, Fatty acid transport protei 3e-17
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 5e-17
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 5e-17
PRK09029458 PRK09029, PRK09029, O-succinylbenzoic acid--CoA li 6e-17
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 4e-16
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 4e-16
PRK07445452 PRK07445, PRK07445, O-succinylbenzoic acid--CoA li 5e-16
PRK05857540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 1e-15
PRK08308414 PRK08308, PRK08308, acyl-CoA synthetase; Validated 2e-15
PRK12476612 PRK12476, PRK12476, putative fatty-acid--CoA ligas 2e-15
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 4e-15
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 4e-15
PRK10252 1296 PRK10252, entF, enterobactin synthase subunit F; P 6e-15
cd05937468 cd05937, FATP_chFAT1_like, Uncharacterized subfami 2e-14
PLN02861660 PLN02861, PLN02861, long-chain-fatty-acid-CoA liga 2e-14
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 4e-14
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 1e-13
PRK12582624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 4e-13
PLN02387696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 9e-13
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 2e-12
cd05921559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 9e-11
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 2e-10
PTZ00342746 PTZ00342, PTZ00342, acyl-CoA synthetase; Provision 4e-10
PRK07769631 PRK07769, PRK07769, long-chain-fatty-acid--CoA lig 6e-10
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 1e-08
PRK05851525 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c 3e-08
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 4e-08
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 2e-07
PLN02387696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 2e-07
pfam1319343 pfam13193, DUF4009, Domain of unknown function (DU 2e-07
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 3e-07
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 6e-07
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 7e-07
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 2e-06
cd05905556 cd05905, Dip2, Disco-interacting protein 2 (Dip2) 9e-06
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 2e-05
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 5e-05
PRK08180614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 6e-05
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 3e-04
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 4e-04
PRK03584655 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr 5e-04
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 0.001
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 0.001
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 0.002
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 0.002
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 0.004
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
 Score =  854 bits (2207), Expect = 0.0
 Identities = 382/545 (70%), Positives = 438/545 (80%), Gaps = 5/545 (0%)

Query: 14  NTSQWYSPETGIYHSKHPSVNLPANDSLLDVDSFIFS-HKHNGRTALVDSLSGYSISYPQ 72
           N   WYSPETGIY SKHP V LP+ D  LD  SFIFS H HNG TAL+DS +G+SISY +
Sbjct: 13  NPPFWYSPETGIYSSKHPPVPLPS-DPNLDAVSFIFSHHNHNGDTALIDSSTGFSISYSE 71

Query: 73  LFPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEI 132
           L PLV+S+A+GL H  G+ QGD VLLLLPNS+YFPVIFLA+L LG IV  MNP  S+ EI
Sbjct: 72  LQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEI 131

Query: 133 KKQVTLCKTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAGKFD 192
           KK+V  C   + LAFT  ENV+KL   G  PV+ VPEN   D K   F  F++LI   FD
Sbjct: 132 KKRVVDCS--VGLAFTSPENVEKLSPLGV-PVIGVPENYDFDSKRIEFPKFYELIKEDFD 188

Query: 193 LVERPVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFL 252
            V +PVI+Q D AAI+YSSGTTGASKG  LTH N IA VELFVRFEASQYEY  S+ V+L
Sbjct: 189 FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYL 248

Query: 253 AVLPMFHIYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALTK 312
           A LPMFHIYGLSLF +GLLSLG ++VVMRRF+AS+M+KVID++ VTHFPVVPPILMALTK
Sbjct: 249 AALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTK 308

Query: 313 AAKGLCGNSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNTK 372
            AKG+CG  LKSLKQVS GAAP + K I+DFV   PHVDFIQGYGMTESTAVGTRGFNT+
Sbjct: 309 KAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTE 368

Query: 373 KFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDK 432
           K SKY SVGLLAPN+QAKVVDW  GC LPPG+ GELW++GPG MK Y+NN  AT STIDK
Sbjct: 369 KLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDK 428

Query: 433 EGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMD 492
           +GWL TGDIAYFDEDGYLYIVDRLKE+IKY G+QI+PADLE VLI HPEI+D AVT   D
Sbjct: 429 DGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVPD 488

Query: 493 KVLGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRREL 552
           K  GEIPVAFVVRR GSTL++ AVI+Y+A++VAPYKKVR+VVF +SIPKS AGK+LRREL
Sbjct: 489 KECGEIPVAFVVRRQGSTLSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRREL 548

Query: 553 RKFLT 557
           ++ LT
Sbjct: 549 KRSLT 553


Length = 560

>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|184022 PRK13391, PRK13391, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213291 cd05924, FACL_like_5, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|178097 PLN02479, PLN02479, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|172019 PRK13382, PRK13382, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|139531 PRK13383, PRK13383, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|139538 PRK13390, PRK13390, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180374 PRK06060, PRK06060, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|236108 PRK07824, PRK07824, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins Back     alignment and domain information
>gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS) Back     alignment and domain information
>gnl|CDD|213305 cd05939, hsFATP4_like, Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236019 PRK07445, PRK07445, O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236231 PRK08308, PRK08308, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|171527 PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi Back     alignment and domain information
>gnl|CDD|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|221971 pfam13193, DUF4009, Domain of unknown function (DUF4009) Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2) Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 560
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
PTZ00237647 acetyl-CoA synthetase; Provisional 100.0
PLN02654666 acetate-CoA ligase 100.0
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 100.0
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK00174637 acetyl-CoA synthetase; Provisional 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PLN02860563 o-succinylbenzoate-CoA ligase 100.0
PRK03584655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK10524629 prpE propionyl-CoA synthetase; Provisional 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PRK07529632 AMP-binding domain protein; Validated 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
PLN03052728 acetate--CoA ligase; Provisional 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PRK04319570 acetyl-CoA synthetase; Provisional 100.0
PLN02736651 long-chain acyl-CoA synthetase 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PRK09274552 peptide synthase; Provisional 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
PLN02614666 long-chain acyl-CoA synthetase 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK13388540 acyl-CoA synthetase; Provisional 100.0
PRK07867529 acyl-CoA synthetase; Validated 100.0
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PTZ00342746 acyl-CoA synthetase; Provisional 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK06087547 short chain acyl-CoA synthetase; Reviewed 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PLN03102579 acyl-activating enzyme; Provisional 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
PRK05857540 acyl-CoA synthetase; Validated 100.0
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07470528 acyl-CoA synthetase; Validated 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PLN02861660 long-chain-fatty-acid-CoA ligase 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
KOG1175626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06164540 acyl-CoA synthetase; Validated 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK12476612 putative fatty-acid--CoA ligase; Provisional 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK08279600 long-chain-acyl-CoA synthetase; Validated 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK08180614 feruloyl-CoA synthase; Reviewed 100.0
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PLN02479567 acetate-CoA ligase 100.0
PLN02430660 long-chain-fatty-acid-CoA ligase 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PTZ00216700 acyl-CoA synthetase; Provisional 100.0
PRK05691 4334 peptide synthase; Validated 100.0
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PRK07868994 acyl-CoA synthetase; Validated 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PRK12582624 acyl-CoA synthetase; Provisional 100.0
PLN03051499 acyl-activating enzyme; Provisional 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK09192579 acyl-CoA synthetase; Validated 100.0
PRK05850578 acyl-CoA synthetase; Validated 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 100.0
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 100.0
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 100.0
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 100.0
KOG36281363 consensus Predicted AMP-binding protein [General f 99.97
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.97
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.93
PRK09188365 serine/threonine protein kinase; Provisional 99.88
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.82
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.81
PF1319373 AMP-binding_C: AMP-binding enzyme C-terminal domai 99.37
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 99.33
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 98.77
PLN02249597 indole-3-acetic acid-amido synthetase 98.53
PLN02247606 indole-3-acetic acid-amido synthetase 98.33
PLN02620612 indole-3-acetic acid-amido synthetase 98.16
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 97.24
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 93.02
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 81.12
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=5.8e-85  Score=660.12  Aligned_cols=491  Identities=42%  Similarity=0.647  Sum_probs=433.8

Q ss_pred             ceEEEECC-CCceecHHHHHHHHHHHHHHHHHhhC--CCCCCEEEEEcCCCChHHHHHHHHHHhCCeEeccCCCCCHHHH
Q 037622           56 RTALVDSL-SGYSISYPQLFPLVQSVASGLRHHFG--ISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEI  132 (560)
Q Consensus        56 ~~a~~~~~-~~~~~Ty~el~~~v~~la~~L~~~~g--~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l  132 (560)
                      .+.++... +|+.+||+|+..++.++|..|.+ +|  +++||+|++++||+++++.+++||+++|+++.+++|.+.+.++
T Consensus        33 ~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~-~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei  111 (537)
T KOG1176|consen   33 NTSLVYQDSDGRELTYSELHDRCRRLASALSE-LGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEI  111 (537)
T ss_pred             cceEEEecCCCcEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHH
Confidence            35666543 26999999999999999999998 66  8899999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCceEEEEeeccchHHhhhcCC---CCEEEecCCCccc-cc-CCCccc-HHHhhcccCCCCCCCCCCCCCEEE
Q 037622          133 KKQVTLCKTKISLAFTIYENVDKLRSWGT---TPVVAVPENLVND-FK-EGRFSD-FHKLIAGKFDLVERPVIRQQDTAA  206 (560)
Q Consensus       133 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~---~~vi~~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~  206 (560)
                      .+.++.+++  ++++++....+++.....   ..++++....... .. ...... +........+.. ......+|++.
T Consensus       112 ~~~~~~s~~--kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dd~~~  188 (537)
T KOG1176|consen  112 AKQLKDSKP--KLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDG-IRPVSEDDTAA  188 (537)
T ss_pred             HHHHHhcCC--eEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCcc-cccCCCCCeEE
Confidence            999999999  999999998888755442   4556655431000 00 001111 333322222222 45567799999


Q ss_pred             EEcCCCCCCCchhhhhhhHHHHHHHHHHHHhhhcccccCCCCcEEEEecChhhHHhHHHHHHHHhhCCCEEEEeCCcCHH
Q 037622          207 ILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYGLSLFALGLLSLGPSVVVMRRFEAS  286 (560)
Q Consensus       207 i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~  286 (560)
                      ++|||||||.||||++||+++..+......     ...+...++.++.+|++|.+|+...+...+..|++++....+++.
T Consensus       189 il~SSGTTg~PKgV~lsHr~~~~~~~~~~~-----~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~  263 (537)
T KOG1176|consen  189 ILYSSGTTGLPKGVVLSHRNLIANTLSIKI-----GWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAE  263 (537)
T ss_pred             EecCCCCCCCCceEEEecHHHHHHHHHhhh-----cccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHH
Confidence            999999999999999999999988766554     345666999999999999999986666688888888888889999


Q ss_pred             HHHHHHHHhCcceeccCcHHHHHHHHhhhccCCCCCCccceeecccCCCCHHHHHHHHHhCCCCeeecccchhhcccccc
Q 037622          287 EMLKVIDKYGVTHFPVVPPILMALTKAAKGLCGNSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGT  366 (560)
Q Consensus       287 ~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~lr~~~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~  366 (560)
                      .+++.+++|++|++.++|..+..|++. +.....+++++|.+.+||+++++++.+++.+.+|...+.+.||+||+++.++
T Consensus       264 ~~~~~i~kykvt~~~~vP~~~~~l~~~-p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~  342 (537)
T KOG1176|consen  264 LFLDLIEKYKVTHLFLVPPVLNMLAKS-PIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLIT  342 (537)
T ss_pred             HHHHHHHHhCEEEEEcChHHHHHHhcC-CccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCcee
Confidence            999999999999999999999999987 4667789999999999999999999999999997799999999999998887


Q ss_pred             cCCCCCCCCcccccccccCCeEEEEEeCCCCccCCCCCcceEEEecccchhhhcCCchhhhhccCCCCceecCceEEEcc
Q 037622          367 RGFNTKKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWLHTGDIAYFDE  446 (560)
Q Consensus       367 ~~~~~~~~~~~~~~G~~~p~~~~~v~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~  446 (560)
                      .+...+. .+++++|+++++++..+.+ ++|+.+++++.||||++|++++.||++||++|++.|+++|||+|||+|++|+
T Consensus       343 ~~~~~~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~  420 (537)
T KOG1176|consen  343 SNDWGPE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDE  420 (537)
T ss_pred             ecCCCcc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcC
Confidence            7765554 6899999999988888888 8999999999999999999999999999999999998889999999999999


Q ss_pred             CCcEEEEccccceeeecceecChHHHHHHHhcCCCcccEEEEcccCCCCCceEEEEEEecCCCCCCHHHHHHHHHhccCC
Q 037622          447 DGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAP  526 (560)
Q Consensus       447 ~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~  526 (560)
                      ||+|++.+|++|+||.+|++|+|.|||++|.+||.|.||+|++.+|+..|+.++|+|+.+++...+++++.++|+++|++
T Consensus       421 DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~l~~  500 (537)
T KOG1176|consen  421 DGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKKLPA  500 (537)
T ss_pred             CCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhhCCh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcceEEEecCCCCCCCCcchHHHHHHHHhc
Q 037622          527 YKKVRRVVFTKSIPKSAAGKVLRRELRKFLTS  558 (560)
Q Consensus       527 ~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~  558 (560)
                      |+.|+.++|+++||+|++|||+|+.||+.+.+
T Consensus       501 y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~  532 (537)
T KOG1176|consen  501 YKLPGGVVFVDELPKTPNGKILRRKLRDIAKK  532 (537)
T ss_pred             hhccCeEEEeccCCCCCcchHHHHHHHHHHHh
Confidence            99999999999999999999999999999875



>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 3e-86
3tsy_A 979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 5e-86
3qya_A582 Crystal Structure Of A Red-Emitter Mutant Of Lampyr 5e-62
4g36_A555 Photinus Pyralis Luciferase In The Adenylate-Formin 2e-60
3iep_A551 Firefly Luciferase Apo Structure (P41 Form) Length 2e-60
1ba3_A550 Firefly Luciferase In Complex With Bromoform Length 3e-60
4g37_A555 Structure Of Cross-Linked Firefly Luciferase In Sec 6e-60
2d1q_A548 Crystal Structure Of The Thermostable Japanese Fire 1e-59
2d1t_A548 Crystal Structure Of The Thermostable Japanese Fire 1e-59
2d1s_A548 Crystal Structure Of The Thermostable Japanese Fire 1e-59
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 2e-44
3g7s_A549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 5e-42
4fuq_A503 Crystal Structure Of Apo Matb From Rhodopseudomonas 3e-39
1ult_A541 Crystal Structure Of Tt0168 From Thermus Thermophil 7e-39
3ivr_A509 Crystal Structure Of Putative Long-Chain-Fatty-Acid 3e-37
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 8e-37
1mdb_A539 Crystal Structure Of Dhbe In Complex With Dhb-adeny 3e-35
4fut_A503 Crystal Structure Of Atp Bound Matb From Rhodopseud 3e-33
1md9_A539 Crystal Structure Of Dhbe In Complex With Dhb And A 2e-32
3nyq_A505 Malonyl-Coa Ligase Ternary Product Complex With Met 5e-32
4gxr_A503 Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len 9e-31
4gxq_A506 Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer 3e-29
2v7b_A529 Crystal Structures Of A Benzoate Coa Ligase From Bu 1e-28
3rg2_A617 Structure Of A Two-Domain Nrps Fusion Protein Conta 6e-28
3b7w_A570 Crystal Structure Of Human Acyl-Coa Synthetase Medi 1e-26
2wd9_A569 Crystal Structure Of Human Acyl-coa Synthetase Medi 1e-26
2qvx_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATIO 4e-26
3o82_A544 Structure Of Base N-Terminal Domain From Acinetobac 6e-26
2qvz_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATIO 2e-25
3cw8_X504 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cb 3e-25
3ipl_A501 Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig 4e-25
1t5d_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chl 5e-25
3dlp_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, 7e-25
1t5h_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SE 3e-24
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 2e-23
1ry2_A663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 4e-23
2p20_A652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 1e-15
2p2b_A652 Acetyl-coa Synthetase, V386a Mutation Length = 652 2e-15
2p2q_A652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 5e-15
2p2m_A652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 6e-15
2p2f_A652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 6e-15
1pg3_A652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 1e-14
2vsq_A 1304 Structure Of Surfactin A Synthetase C (Srfa-C), A N 2e-14
2p2j_A652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 3e-14
3vnq_A544 Co-crystal Structure Of Nrps Adenylation Protein Cy 3e-12
3kxw_A590 The Crystal Structure Of Fatty Acid Amp Ligase From 8e-12
4gr5_A570 Crystal Structure Of Slgn1deltaasub In Complex With 6e-11
3pbk_A583 Structural And Functional Studies Of Fatty Acyl-Ade 7e-11
3l8c_A521 Structure Of Probable D-Alanine--Poly(Phosphoribito 1e-10
3fcc_A512 Crystal Structure Of Dlta Protein In Complex With A 5e-09
3dhv_A512 Crystal Structure Of Dlta Protein In Complex With D 5e-09
1amu_A563 Phenylalanine Activating Domain Of Gramicidin Synth 2e-08
4dg8_A 620 Structure Of Pa1221, An Nrps Protein Containing Ade 7e-08
3e7w_A511 Crystal Structure Of Dlta: Implications For The Rea 2e-07
3t5a_A480 Crystal Structure Of N-Terminal Domain Of Faal28 G3 4e-04
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure

Iteration: 1

Score = 315 bits (808), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 202/541 (37%), Positives = 297/541 (54%), Gaps = 16/541 (2%) Query: 22 ETGIYHSKHPSVNLPANDSLLDVDSFIFSH--KHNGRTALVDSLSGYSISYPQLFPLVQS 79 E I+ SK P + +P N L + S++ + H+ + L++ +G +Y + + Sbjct: 5 EEFIFRSKLPDIYIPKN---LPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARR 61 Query: 80 VASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLC 139 VASGL + GI QGD ++L LP+S F + FL + GAI+ NP + +E+ K Sbjct: 62 VASGL-NKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKAS 120 Query: 140 KTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAGKFDLVERPVI 199 + K+ + Y +K++ + V V V+ +G F +L + + I Sbjct: 121 RAKLLITQACY--YEKVKDFARESDVKV--MCVDSAPDGCLH-FSELTQADENEAPQVDI 175 Query: 200 RQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFH 259 D A+ YSSGTTG KG LTH I +V V + Y SE V L VLPMFH Sbjct: 176 SPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNL-YFHSEDVILCVLPMFH 234 Query: 260 IYXXXXXXXXXXXXXXXXXXMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKGLCG 319 IY M +FE +L +I+KY V+ PVVPP++M++ K+ L Sbjct: 235 IYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPD-LDK 293 Query: 320 NSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAV--GTRGFNTKKFS-K 376 + L SL+ + SG AP ++ + FP QGYGMTE+ V F + F K Sbjct: 294 HDLSSLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIK 353 Query: 377 YFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWL 436 + G + N + K+VD G LP GE+ +RG MK Y+N+ +AT TIDKEGWL Sbjct: 354 PGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWL 413 Query: 437 HTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLG 496 HTGDI Y D+D L+IVDRLKE+IKY G+Q++PA+LE +LI HPEI D AV G D+ G Sbjct: 414 HTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAG 473 Query: 497 EIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRKFL 556 E+PVAFVV+ + S TE + Y++++V YK+++RV F ++IPK+ +GK+LR+ L++ L Sbjct: 474 EVPVAFVVKSEKSQATEDEIKQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEKL 533 Query: 557 T 557 Sbjct: 534 A 534
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|3QYA|A Chain A, Crystal Structure Of A Red-Emitter Mutant Of Lampyris Turkestanicus Luciferase Length = 582 Back     alignment and structure
>pdb|4G36|A Chain A, Photinus Pyralis Luciferase In The Adenylate-Forming Conformation Bound To Dlsa Length = 555 Back     alignment and structure
>pdb|3IEP|A Chain A, Firefly Luciferase Apo Structure (P41 Form) Length = 551 Back     alignment and structure
>pdb|1BA3|A Chain A, Firefly Luciferase In Complex With Bromoform Length = 550 Back     alignment and structure
>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second Catalytic Conformation Length = 555 Back     alignment and structure
>pdb|2D1Q|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With Mgatp Length = 548 Back     alignment and structure
>pdb|2D1T|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Red-Color Emission S286n Mutant Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|2D1S|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|4FUQ|A Chain A, Crystal Structure Of Apo Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure
>pdb|3IVR|A Chain A, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa Ligase From Rhodopseudomonas Palustris Cga009 Length = 509 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|1MDB|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb-adenylate Length = 539 Back     alignment and structure
>pdb|4FUT|A Chain A, Crystal Structure Of Atp Bound Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|1MD9|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb And Amp Length = 539 Back     alignment and structure
>pdb|3NYQ|A Chain A, Malonyl-Coa Ligase Ternary Product Complex With Methylmalonyl-Coa And Amp Bound Length = 505 Back     alignment and structure
>pdb|4GXR|A Chain A, Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Length = 503 Back     alignment and structure
>pdb|4GXQ|A Chain A, Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimera B1 Length = 506 Back     alignment and structure
>pdb|2V7B|A Chain A, Crystal Structures Of A Benzoate Coa Ligase From Burkholderia Xenovorans Lb400 Length = 529 Back     alignment and structure
>pdb|3RG2|A Chain A, Structure Of A Two-Domain Nrps Fusion Protein Containing The Ente Adenylation Domain And Entb Aryl-Carrier Protein From Enterobactin Biosynthesis Length = 617 Back     alignment and structure
>pdb|3B7W|A Chain A, Crystal Structure Of Human Acyl-Coa Synthetase Medium-Chain Family Member 2a, With L64p Mutation Length = 570 Back     alignment and structure
>pdb|2WD9|A Chain A, Crystal Structure Of Human Acyl-coa Synthetase Medium-chain Family Member 2a (l64p Mutation) In Complex With Ibuprofen Length = 569 Back     alignment and structure
>pdb|2QVX|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter Baumannii Bound To 5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine Length = 544 Back     alignment and structure
>pdb|2QVZ|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3CW8|X Chain X, 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cba-adenylate Length = 504 Back     alignment and structure
>pdb|3IPL|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid-Coa Ligase From Staphylococcus Aureus Subsp. Aureus Mu50 Length = 501 Back     alignment and structure
>pdb|1T5D|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3DLP|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, BOUND To 4cb Length = 504 Back     alignment and structure
>pdb|1T5H|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SELENOMETHIONINE Length = 504 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A Nonribosomal Peptide Synthetase Termination Module Length = 1304 Back     alignment and structure
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|3VNQ|A Chain A, Co-crystal Structure Of Nrps Adenylation Protein Cytc1 With Atp From Streptomyces Length = 544 Back     alignment and structure
>pdb|3KXW|A Chain A, The Crystal Structure Of Fatty Acid Amp Ligase From Legionella Pneumophila Length = 590 Back     alignment and structure
>pdb|4GR5|A Chain A, Crystal Structure Of Slgn1deltaasub In Complex With Ampcpp Length = 570 Back     alignment and structure
>pdb|3PBK|A Chain A, Structural And Functional Studies Of Fatty Acyl-Adenylate Ligases From E. Coli And L. Pneumophila Length = 583 Back     alignment and structure
>pdb|3L8C|A Chain A, Structure Of Probable D-Alanine--Poly(Phosphoribitol) Ligase Subunit-1 From Streptococcus Pyogenes Length = 521 Back     alignment and structure
>pdb|3FCC|A Chain A, Crystal Structure Of Dlta Protein In Complex With Atp And Magnesium Length = 512 Back     alignment and structure
>pdb|3DHV|A Chain A, Crystal Structure Of Dlta Protein In Complex With D-Alanine Adenylate Length = 512 Back     alignment and structure
>pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1 In A Complex With Amp And Phenylalanine Length = 563 Back     alignment and structure
>pdb|4DG8|A Chain A, Structure Of Pa1221, An Nrps Protein Containing Adenylation And Pcp Domains Length = 620 Back     alignment and structure
>pdb|3E7W|A Chain A, Crystal Structure Of Dlta: Implications For The Reaction Mechanism Of Non-Ribosomal Peptide Synthetase (Nrps) Adenylation Domains Length = 511 Back     alignment and structure
>pdb|3T5A|A Chain A, Crystal Structure Of N-Terminal Domain Of Faal28 G330w Mutant From Mycobacterium Tuberculosis Length = 480 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 0.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 0.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 0.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 0.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 0.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 1e-154
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 1e-151
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 1e-148
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 1e-146
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 1e-144
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 1e-139
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 1e-138
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 1e-136
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 1e-136
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 1e-135
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 2e-92
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 2e-87
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 1e-80
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 2e-64
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 5e-63
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 1e-48
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 6e-24
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 7e-23
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 1e-21
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 6e-21
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 8e-21
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 1e-20
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 2e-20
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 6e-20
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 9e-20
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 1e-16
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 2e-06
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 2e-05
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
 Score =  655 bits (1693), Expect = 0.0
 Identities = 203/538 (37%), Positives = 298/538 (55%), Gaps = 16/538 (2%)

Query: 22  ETGIYHSKHPSVNLPANDSLLDVDSFIFS--HKHNGRTALVDSLSGYSISYPQLFPLVQS 79
           E  I+ SK P + +P N   L + S++      H+ +  L++  +G   +Y  +    + 
Sbjct: 5   EEFIFRSKLPDIYIPKN---LPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARR 61

Query: 80  VASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLC 139
           VASGL    GI QGD ++L LP+S  F + FL   + GAI+   NP  + +E+ K     
Sbjct: 62  VASGLNKI-GIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKAS 120

Query: 140 KTKISLAFTIYENVDKLRSWGTTPVVAVPENLVNDFKEGRFSDFHKLIAGKFDLVERPVI 199
           + K+    T     +K++         V    V+   +G    F +L     +   +  I
Sbjct: 121 RAKL--LITQACYYEKVKD--FARESDVKVMCVDSAPDGCLH-FSELTQADENEAPQVDI 175

Query: 200 RQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFH 259
              D  A+ YSSGTTG  KG  LTH   I +V   V  +     Y  SE V L VLPMFH
Sbjct: 176 SPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNL-YFHSEDVILCVLPMFH 234

Query: 260 IYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKGLCG 319
           IY L+   L  L +G  +++M +FE   +L +I+KY V+  PVVPP++M++ K+   L  
Sbjct: 235 IYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPD-LDK 293

Query: 320 NSLKSLKQVSSGAAPANSKIIEDFVGAFPHVDFIQGYGMTESTAVGTRGFNTKKF---SK 376
           + L SL+ + SG AP   ++ +     FP     QGYGMTE+  V        K     K
Sbjct: 294 HDLSSLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIK 353

Query: 377 YFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPGTMKEYINNADATMSTIDKEGWL 436
             + G +  N + K+VD   G  LP    GE+ +RG   MK Y+N+ +AT  TIDKEGWL
Sbjct: 354 PGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWL 413

Query: 437 HTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLG 496
           HTGDI Y D+D  L+IVDRLKE+IKY G+Q++PA+LE +LI HPEI D AV G  D+  G
Sbjct: 414 HTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAG 473

Query: 497 EIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRK 554
           E+PVAFVV+ + S  TE  +  Y++++V  YK+++RV F ++IPK+ +GK+LR+ L++
Sbjct: 474 EVPVAFVVKSEKSQATEDEIKQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKE 531


>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Length = 521 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Length = 369 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Length = 511 Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Length = 563 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Length = 512 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Length = 620 Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Length = 443 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Length = 436 Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Length = 437 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query560
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.98
3gxs_A109 Phenylacetate-coenzyme A ligase; APC62324.1, struc 99.55
3lax_A109 Phenylacetate-coenzyme A ligase; structural genomi 99.52
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 99.14
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 99.11
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 99.03
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 88.02
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 87.46
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 86.46
3ni2_A 536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 80.75
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
Probab=100.00  E-value=1.3e-85  Score=693.31  Aligned_cols=522  Identities=38%  Similarity=0.627  Sum_probs=454.7

Q ss_pred             CceeccCCCCCCCCCCCCCCCHHHHHhccCC--CCceEEEECCCCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEc
Q 037622           23 TGIYHSKHPSVNLPANDSLLDVDSFIFSHKH--NGRTALVDSLSGYSISYPQLFPLVQSVASGLRHHFGISQGDAVLLLL  100 (560)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~a~~~~~~~~~~Ty~el~~~v~~la~~L~~~~g~~~gd~V~i~~  100 (560)
                      ..++.++.++..+|.   ..|+++++.++++  ++++|+++..+++++||+||.++++++|++|.+ +|+++||+|+|++
T Consensus         6 ~~i~~~~~~~~~~p~---~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~Gv~~gd~V~i~~   81 (536)
T 3ni2_A            6 EFIFRSKLPDIYIPK---NLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNK-IGIQQGDVIMLFL   81 (536)
T ss_dssp             CCCBCCSSCCCCCCS---SCCHHHHHTTTGGGSTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEEC
T ss_pred             ceEEecCCCCCCCCC---CCcHHHHHHHHhhcCCCceEEEECCCCCEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEc
Confidence            346667766666653   3799999998875  569999997667899999999999999999999 8999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHHHhcCCceEEEEeeccchHHhhhcC---CCCEEEecCCCcccccC
Q 037622          101 PNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLCKTKISLAFTIYENVDKLRSWG---TTPVVAVPENLVNDFKE  177 (560)
Q Consensus       101 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~~~---~~~vi~~~~~~~~~~~~  177 (560)
                      +|++++++++|||+++|++++|++|.++.+++.++++.+++  ++++++......+....   ...++.++..      .
T Consensus        82 ~~~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~  153 (536)
T 3ni2_A           82 PSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRA--KLLITQACYYEKVKDFARESDVKVMCVDSA------P  153 (536)
T ss_dssp             CSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTE--EEEEECGGGTHHHHHHHHHHTCEEEESSCC------C
T ss_pred             CCcHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCC--EEEEEChHHHHHHHHHHhhcCceEEEecCC------C
Confidence            99999999999999999999999999999999999999999  99999987665544321   2445554432      2


Q ss_pred             CCcccHHHhhcccCCCCCCCCCCCCCEEEEEcCCCCCCCchhhhhhhHHHHHHHHHHHHhhhcccccCCCCcEEEEecCh
Q 037622          178 GRFSDFHKLIAGKFDLVERPVIRQQDTAAILYSSGTTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPM  257 (560)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  257 (560)
                      .....+.++..............++++++|+|||||||.||+|+++|+++.+.+........ ....+.++|++++.+|+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~-~~~~~~~~d~~l~~~p~  232 (536)
T 3ni2_A          154 DGCLHFSELTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDN-PNLYFHSEDVILCVLPM  232 (536)
T ss_dssp             TTCEETHHHHTSCGGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSS-CSSCCCTTCCEEECSCT
T ss_pred             CCccCHHHHhhccccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhcc-ccccCCCCCEEEEecCh
Confidence            23344555554433333444567899999999999999999999999999987766543111 02457789999999999


Q ss_pred             hhHHhHHHHHHHHhhCCCEEEEeCCcCHHHHHHHHHHhCcceeccCcHHHHHHHHhhhccCCCCCCccceeecccCCCCH
Q 037622          258 FHIYGLSLFALGLLSLGPSVVVMRRFEASEMLKVIDKYGVTHFPVVPPILMALTKAAKGLCGNSLKSLKQVSSGAAPANS  337 (560)
Q Consensus       258 ~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~lr~~~~~g~~~~~  337 (560)
                      +|.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++. ......+++++|.+++|||++++
T Consensus       233 ~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~l~~lr~i~~gGe~l~~  311 (536)
T 3ni2_A          233 FHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKS-PDLDKHDLSSLRMIKSGGAPLGK  311 (536)
T ss_dssp             TSHHHHHHTHHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTC-SCGGGSCCTTCCEEEEESSCCCH
T ss_pred             HHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhC-cccccCCCccceEEEECCCCCCH
Confidence            99999977788999999999999999999999999999999999999999999876 44455678999999999999999


Q ss_pred             HHHHHHHHhCCCCeeecccchhhcccccccCC---CCCCCCcccccccccCCeEEEEEeCCCCccCCCCCcceEEEeccc
Q 037622          338 KIIEDFVGAFPHVDFIQGYGMTESTAVGTRGF---NTKKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRGPG  414 (560)
Q Consensus       338 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~---~~~~~~~~~~~G~~~p~~~~~v~d~~~~~~~~~g~~Gel~v~~~~  414 (560)
                      ++.+++.+.||++++++.||+||++.+++.+.   ........+++|+|+|+++++|+|++++++++.|+.|||+|+|++
T Consensus       312 ~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~  391 (536)
T 3ni2_A          312 ELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQ  391 (536)
T ss_dssp             HHHHHHHHHCTTSEEEEEEECGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTTCCEEEEEESTT
T ss_pred             HHHHHHHHHCCCCCccccccccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCCCccEEEEeCcc
Confidence            99999999999999999999999997765442   122234678999999999999999888999999999999999999


Q ss_pred             chhhhcCCchhhhhccCCCCceecCceEEEccCCcEEEEccccceeeecceecChHHHHHHHhcCCCcccEEEEcccCCC
Q 037622          415 TMKEYINNADATMSTIDKEGWLHTGDIAYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKV  494 (560)
Q Consensus       415 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~  494 (560)
                      ++.||+++|+.|...|+.+|||+|||+|++++||+++++||+||+||++|++|+|.|||++|.+||+|.+++|++.+++.
T Consensus       392 v~~GY~~~p~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~~~~  471 (536)
T 3ni2_A          392 IMKGYLNDPEATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDED  471 (536)
T ss_dssp             SCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSCCEEETTEEECHHHHHHHHHTSTTEEEEEEEEEEETT
T ss_pred             cchhhcCChhHHHhhccCCCceEcccEEEEcCCceEEEEecccceEEECCEEECHHHHHHHHHhCCCcceEEEEeeecCC
Confidence            99999999999999998899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEecCCCCCCHHHHHHHHHhccCCCCCcceEEEecCCCCCCCCcchHHHHHHHHhc
Q 037622          495 LGEIPVAFVVRRDGSTLTEAAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRKFLTS  558 (560)
Q Consensus       495 ~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~  558 (560)
                      .++.++++|+..++...+.++++++++++|+.|++|+.++++++||+|++|||+|++|+++++.
T Consensus       472 ~g~~~~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKi~R~~L~~~~~~  535 (536)
T 3ni2_A          472 AGEVPVAFVVKSEKSQATEDEIKQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEKLAG  535 (536)
T ss_dssp             TEEEEEEEEEECTTCCCCHHHHHHHHHTTSCGGGCCSEEEECSCCCBCTTSCBCHHHHHTC---
T ss_pred             CCceeEEEEEecCCCCCCHHHHHHHHHHhccCCccccEEEEEecCCCCCCCCeeHHHHHHHhcc
Confidence            9999999999988888889999999999999999999999999999999999999999998753



>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 560
d1pg4a_643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 1e-122
d1ry2a_640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 1e-108
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 1e-107
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 1e-101
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 6e-87
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 8e-85
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 3e-83
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]
 Score =  372 bits (957), Expect = e-122
 Identities = 118/536 (22%), Positives = 213/536 (39%), Gaps = 39/536 (7%)

Query: 52  KHNGRTALV----DSLSGYSISYPQLFPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFP 107
           ++  RTA++    D+     ISY +L   V   A+ L    GI +GD V + +P      
Sbjct: 84  ENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDL-GIKKGDVVAIYMPMVPEAA 142

Query: 108 VIFLALLYLGAIVIPMNPLLSVSEIKKQVTLCKTKISL----------AFTIYENVDKLR 157
           V  LA   +GA+   +    S   +   +    +++ +          +  + +NVD   
Sbjct: 143 VAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDAL 202

Query: 158 SWGTTP-----VVAVPENLVNDFKEGRFSDFHKLIAGKFDLVERPVIRQQDTAAILYSSG 212
                      +V        D++EGR   +  LI       +   +  +D   ILY+SG
Sbjct: 203 KNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSG 262

Query: 213 TTGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYGLSLFALGLLS 272
           +TG  KG   T G ++       ++            ++     +  + G S    G L+
Sbjct: 263 STGKPKGVLHTTGGYLVYAATTFKYVFD----YHPGDIYWCTADVGWVTGHSYLLYGPLA 318

Query: 273 LGPSVVVM----RRFEASEMLKVIDKYGVTHFPVVPPILMALTKAA-KGLCGNSLKSLKQ 327
            G + ++          + M +V+DK+ V      P  + AL     K + G    SL+ 
Sbjct: 319 CGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRI 378

Query: 328 VSSGAAPANSKIIEDFVGAF--PHVDFIQGYGMTESTAVGTRGFNTKKFSKYFSVGLLAP 385
           + S   P N +  E +           +  +  TE+              K  S      
Sbjct: 379 LGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFF 438

Query: 386 NIQAKVVDWVNGCFLPPGSTGELWLRG--PGTMKEYINNADATMSTIDK--EGWLHTGDI 441
            +Q  +VD   G      + G L +    PG  +    + +    T     +    +GD 
Sbjct: 439 GVQPALVD-NEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDG 497

Query: 442 AYFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLGEIPVA 501
           A  DEDGY +I  R+ +V+  +G+++  A++E+ L+ HP+I + AV G    + G+   A
Sbjct: 498 ARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYA 557

Query: 502 FVVRRDGSTLTE---AAVIDYLAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRK 554
           +V    G   +    A V +++ + + P      + +T S+PK+ +GK++RR LRK
Sbjct: 558 YVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRK 613


>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query560
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 86.48
d1v25a_ 534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 83.43
d3cw9a1 503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 82.3
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]
Probab=100.00  E-value=9e-83  Score=680.89  Aligned_cols=544  Identities=23%  Similarity=0.318  Sum_probs=450.9

Q ss_pred             hhhhhhccCCCCCCCCCCCCCCceeccC----CCCCCCCCCCCCCCHHHHHh-ccC--CCCceEEEEC----CCCceecH
Q 037622            2 EKFLQTFSSERINTSQWYSPETGIYHSK----HPSVNLPANDSLLDVDSFIF-SHK--HNGRTALVDS----LSGYSISY   70 (560)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~a~~~~----~~~~~~Ty   70 (560)
                      |.||.+.+..    ..|..+..++....    .+...|.. +..+|+.+.+. +++  +++++|++..    .+.+++||
T Consensus        32 ~~fW~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~wf~-~~~~N~~~n~ldrh~~~~~d~~Ali~~~~~~~~~~~~TY  106 (643)
T d1pg4a_          32 DTFWGEQGKI----LDWITPYQKVKNTSFAPGNVSIKWYE-DGTLNLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISY  106 (643)
T ss_dssp             HHHHHHHGGG----SCCSBCCSCCEEEECCTTCCEEEEST-TCEECHHHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEH
T ss_pred             HHHHHHHHhh----eeEECCCcccccCccCCCCCCCeeCC-CChhhHHHHHHHHHHHhCCCCEEEEEEecCCCCceEEeH
Confidence            5788877743    67988888876442    12344665 67789887655 332  4679999842    22368999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCCEEEEEcCCCChHHHHHHHHHHhCCeEeccCCCCCHHHHHHHHHhcCCceEEEEeec
Q 037622           71 PQLFPLVQSVASGLRHHFGISQGDAVLLLLPNSIYFPVIFLALLYLGAIVIPMNPLLSVSEIKKQVTLCKTKISLAFTIY  150 (560)
Q Consensus        71 ~el~~~v~~la~~L~~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~v~~~~  150 (560)
                      +||.++|+++|++|.+ +|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++++.+++  +++++++
T Consensus       107 ~eL~~~v~~~A~~L~~-~Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~--~~li~~~  183 (643)
T d1pg4a_         107 RELHRDVCRFANTLLD-LGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSS--RLVITAD  183 (643)
T ss_dssp             HHHHHHHHHHHHHHHH-HTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTC--SEEEEES
T ss_pred             HHHHHHHHHHHHHHHH-cCCCCCCEEEEecccchHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCC--CEEEEcc
Confidence            9999999999999999 899999999999999999999999999999999999999999999999999999  8888776


Q ss_pred             cchHH---------h---hhc---CC-CCEEEecCCCcc-cccCCCcccHHHhhcccCCCCCCCCCCCCCEEEEEcCCCC
Q 037622          151 ENVDK---------L---RSW---GT-TPVVAVPENLVN-DFKEGRFSDFHKLIAGKFDLVERPVIRQQDTAAILYSSGT  213 (560)
Q Consensus       151 ~~~~~---------~---~~~---~~-~~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGT  213 (560)
                      .....         .   ...   .. ..++++...... ..........................+++++++|+|||||
T Consensus       184 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGT  263 (643)
T d1pg4a_         184 EGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGS  263 (643)
T ss_dssp             EEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCCBTTEEEHHHHHTTSCSCCCCCCEETTSEEEEEEECCS
T ss_pred             hhhhhccccchhhhHHHHHhccccccceEEEEeccCCcccccccccchhhhhhhcccCcccCCCCCCCCCeEEEEeCCCc
Confidence            43211         1   110   11 234444433211 1111222334444444444455556788999999999999


Q ss_pred             CCCchhhhhhhHHHHHHHHHHHHhhhcccccCCCCcEEEEecChhhHHhHHHHHHHHhhCCCEEEEeCC----cCHHHHH
Q 037622          214 TGASKGAELTHGNFIAAVELFVRFEASQYEYLSSEAVFLAVLPMFHIYGLSLFALGLLSLGPSVVVMRR----FEASEML  289 (560)
Q Consensus       214 TG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~  289 (560)
                      ||.||||+++|++++.........    ...++++|++++..|++|++++...++.+|+.|+++++++.    +++..++
T Consensus       264 TG~PKgV~~sh~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~~~~~~  339 (643)
T d1pg4a_         264 TGKPKGVLHTTGGYLVYAATTFKY----VFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMC  339 (643)
T ss_dssp             SSSCEEEEEESHHHHHHHHHHHHH----HTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHH
T ss_pred             ccCCCEEEEccHHHHHHHHHHHHH----hhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEecCCCCCCCHHHHH
Confidence            999999999999977655443331    35688999999999999999987778899999999999764    4789999


Q ss_pred             HHHHHhCcceeccCcHHHHHHHHhhh-ccCCCCCCccceeecccCCCCHHHHHHHHHhCC--CCeeecccchhhcccccc
Q 037622          290 KVIDKYGVTHFPVVPPILMALTKAAK-GLCGNSLKSLKQVSSGAAPANSKIIEDFVGAFP--HVDFIQGYGMTESTAVGT  366 (560)
Q Consensus       290 ~~l~~~~~t~l~~~P~~~~~l~~~~~-~~~~~~l~~lr~~~~~g~~~~~~~~~~~~~~~~--~~~i~~~YG~tE~~~~~~  366 (560)
                      +.++++++|+++++|++++.|.+... .....++++||.++++|+++++++++++.+.++  ++++++.||+||+|++++
T Consensus       340 ~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~G~pl~~~~~~~~~~~~g~~~~~i~~~yG~TE~g~~~~  419 (643)
T d1pg4a_         340 QVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMI  419 (643)
T ss_dssp             HHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSB
T ss_pred             HHHHHHCCcEEEehHHHHHHHHhCcchhccccCCCceEEEEEEeCCCCHHHHHHHHHHhCCCCceEEEeechhhccceEE
Confidence            99999999999999999999987532 234567899999999999999999999999984  578999999999998777


Q ss_pred             cCCCCCCCCcccccccccCCeEEEEEeCCCCccCCCCCcceEEEec--ccchhhhcCCchhhhhcc--CCCCceecCceE
Q 037622          367 RGFNTKKFSKYFSVGLLAPNIQAKVVDWVNGCFLPPGSTGELWLRG--PGTMKEYINNADATMSTI--DKEGWLHTGDIA  442 (560)
Q Consensus       367 ~~~~~~~~~~~~~~G~~~p~~~~~v~d~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~--~~~~~~~TGD~~  442 (560)
                      .........+.+++|+|+||++++++| +++++++.|+.|||+|+|  |+++.||+++++.+.+.+  ..+|||+|||+|
T Consensus       420 ~~~~~~~~~~~gs~G~p~~g~~v~ivd-~~g~~~~~g~~Gel~v~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~TGDl~  498 (643)
T d1pg4a_         420 TPLPGAIELKAGSATRPFFGVQPALVD-NEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGA  498 (643)
T ss_dssp             CCCTTTCCBCTTCCBSBCTTCCEEEEC-TTCCBCCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEE
T ss_pred             ecCCCccCCCCCccccccCCCEEEEEC-CCCCCCCCCceEEEEEecCCCcccccccCChhhchhhhcccCCCeEEcCCEE
Confidence            654444456789999999999999999 678999999999999999  578899999998877654  357899999999


Q ss_pred             EEccCCcEEEEccccceeeecceecChHHHHHHHhcCCCcccEEEEcccCCCCCceEEEEEEecCCCCCCH---HHHHHH
Q 037622          443 YFDEDGYLYIVDRLKEVIKYNGYQISPADLETVLICHPEILDVAVTGAMDKVLGEIPVAFVVRRDGSTLTE---AAVIDY  519 (560)
Q Consensus       443 ~~~~~g~l~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~  519 (560)
                      ++|+||+++++||+||+||++|++|+|.|||++|.+||+|.+|+|++.+++..|+.++++|++.++...+.   ++|+++
T Consensus       499 ~~d~dG~l~i~GR~dd~ik~~G~ri~p~eIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vv~~~~~~~~~~~~~~i~~~  578 (643)
T d1pg4a_         499 RRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNW  578 (643)
T ss_dssp             EECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred             EECCCceEEEecccccEEEECCEEECHHHHHHHHHhCCCcceEEEEEEECCCCCeEEEEEEEECCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999998876665   489999


Q ss_pred             HHhccCCCCCcceEEEecCCCCCCCCcchHHHHHHHHhc
Q 037622          520 LAQRVAPYKKVRRVVFTKSIPKSAAGKVLRRELRKFLTS  558 (560)
Q Consensus       520 ~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~  558 (560)
                      |+++|+++++|+.|+++++||+|++|||+|++||+.++.
T Consensus       579 ~~~~L~~~~vP~~i~~v~~lP~T~sGKi~R~~Lr~~~~~  617 (643)
T d1pg4a_         579 VRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAG  617 (643)
T ss_dssp             HHHHTCGGGCCSEEEECSCCCBCTTSCBCHHHHHHHHHT
T ss_pred             HHhhCCcccCccEEEEECCCCCCCCcCccHHHHHHHhcC
Confidence            999999999999999999999999999999999998865



>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure