Citrus Sinensis ID: 037639
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 361 | 2.2.26 [Sep-21-2011] | |||||||
| Q13231 | 466 | Chitotriosidase-1 OS=Homo | yes | no | 0.869 | 0.673 | 0.325 | 3e-42 | |
| Q95M17 | 472 | Acidic mammalian chitinas | yes | no | 0.861 | 0.658 | 0.332 | 6e-40 | |
| Q15782 | 390 | Chitinase-3-like protein | no | no | 0.914 | 0.846 | 0.317 | 3e-39 | |
| Q9D7Q1 | 464 | Chitotriosidase-1 OS=Mus | yes | no | 0.922 | 0.717 | 0.306 | 4e-39 | |
| Q9WTV1 | 381 | Chitinase-3-like protein | no | no | 0.850 | 0.805 | 0.335 | 8e-39 | |
| Q6RY07 | 473 | Acidic mammalian chitinas | no | no | 0.952 | 0.727 | 0.315 | 1e-38 | |
| P36222 | 383 | Chitinase-3-like protein | no | no | 0.850 | 0.801 | 0.337 | 2e-38 | |
| Q9BZP6 | 476 | Acidic mammalian chitinas | no | no | 0.947 | 0.718 | 0.321 | 4e-38 | |
| Q5RBP6 | 410 | Chitinase-3-like protein | no | no | 0.850 | 0.748 | 0.340 | 6e-38 | |
| Q91XA9 | 473 | Acidic mammalian chitinas | no | no | 0.855 | 0.653 | 0.321 | 1e-37 |
| >sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 171/344 (49%), Gaps = 30/344 (8%)
Query: 30 AAYWFSGSNFPVADIDSILFTHLFCAFADLDSQNFQVTVSSENQAIFSSFTRTVQQKNPA 89
A Y + F D+D L THL AFA + N Q++ + N +++ NP
Sbjct: 32 AQYRQGEARFLPKDLDPSLCTHLIYAFAGMT--NHQLSTTEWNDETLYQEFNGLKKMNPK 89
Query: 90 VKALLSIGGGNASKESFAAMASQAASRKSFIDSSINLARSLNFHGLDIDWEYPDN----- 144
+K LL+IGG N + F M + A +R++F++S+I R +F GLD+DWEYP +
Sbjct: 90 LKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPA 149
Query: 145 AQMSDFGTLLTEWRSAVAAEARSSGKPALLLTAAVSYSANYFGAINPTSAISNSLDWTNV 204
F TL+ + +A EA++SGK LLL+AAV Y A I+ +LD+ N+
Sbjct: 150 VDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNL 209
Query: 205 MAYDFFYNDDRTGSRITGPPAALFSPDRSQVSG-------DSGIRAWIQSGLSPKKIVLG 257
MAYDF + ++TG + L+ R + SG D+ ++ W+Q G K++LG
Sbjct: 210 MAYDF----HGSWEKVTGHNSPLYK--RQEESGAAASLNVDAAVQQWLQKGTPASKLILG 263
Query: 258 FPFFGHSLQLANANNHGFWAPTSG-------VVNGGTMSYKEIRQFIMSTNATKVFNATV 310
P +G S LA++++ AP +G GG ++Y E+ + ATK
Sbjct: 264 MPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSW---KGATKQRIQDQ 320
Query: 311 VSDYCYSGTTWIGYDDTQSVNTKVKYAKDNGLLGYFAWQISQDD 354
Y + W+G+DD +S TKV Y K GL G W + DD
Sbjct: 321 KVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 364
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Degrades chitin, chitotriose and chitobiose. May participate in the defense against nematodes and other pathogens. Isoform 3 has no enzymatic activity. Homo sapiens (taxid: 9606) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4 |
| >sp|Q95M17|CHIA_BOVIN Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1 | Back alignment and function description |
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| >sp|Q15782|CH3L2_HUMAN Chitinase-3-like protein 2 OS=Homo sapiens GN=CHI3L2 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9D7Q1|CHIT1_MOUSE Chitotriosidase-1 OS=Mus musculus GN=Chit1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9WTV1|CH3L1_RAT Chitinase-3-like protein 1 OS=Rattus norvegicus GN=Chi3l1 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q6RY07|CHIA_RAT Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1 | Back alignment and function description |
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| >sp|P36222|CH3L1_HUMAN Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9BZP6|CHIA_HUMAN Acidic mammalian chitinase OS=Homo sapiens GN=CHIA PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5RBP6|CH3L1_PONAB Chitinase-3-like protein 1 OS=Pongo abelii GN=CHI3L1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 361 | ||||||
| 15235200 | 379 | Glycosyl hydrolase family protein with c | 0.977 | 0.931 | 0.605 | 1e-122 | |
| 297800072 | 379 | glycosyl hydrolase family 18 protein [Ar | 0.977 | 0.931 | 0.605 | 1e-122 | |
| 374719233 | 366 | chitinase 3 [Populus x canadensis] | 0.941 | 0.928 | 0.634 | 1e-120 | |
| 340780338 | 356 | Chain A, Crystal Structure Of A Class V | 0.922 | 0.935 | 0.625 | 1e-119 | |
| 255565049 | 371 | chitinase, putative [Ricinus communis] g | 0.991 | 0.964 | 0.602 | 1e-119 | |
| 224091669 | 370 | predicted protein [Populus trichocarpa] | 0.991 | 0.967 | 0.592 | 1e-118 | |
| 374719231 | 370 | chitinase 2 [Populus x canadensis] | 0.991 | 0.967 | 0.592 | 1e-118 | |
| 224145961 | 360 | predicted protein [Populus trichocarpa] | 0.927 | 0.930 | 0.628 | 1e-117 | |
| 224091667 | 383 | predicted protein [Populus trichocarpa] | 0.919 | 0.866 | 0.625 | 1e-115 | |
| 222139396 | 368 | class V chitinase [Pyrus pyrifolia] | 0.969 | 0.951 | 0.590 | 1e-109 |
| >gi|15235200|ref|NP_193716.1| Glycosyl hydrolase family protein with chitinase insertion domain [Arabidopsis thaliana] gi|3250690|emb|CAA19698.1| putative chitinase [Arabidopsis thaliana] gi|7268777|emb|CAB78983.1| putative chitinase [Arabidopsis thaliana] gi|119360133|gb|ABL66795.1| At4g19810 [Arabidopsis thaliana] gi|332658828|gb|AEE84228.1| Glycosyl hydrolase family protein with chitinase insertion domain [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/360 (60%), Positives = 273/360 (75%), Gaps = 7/360 (1%)
Query: 4 KILPVLLSFTLLLLQLHSSAGQNAVKAAYWFSGSNFPVADIDSILFTHLFCAFADLDSQN 63
K++ +++S T L L S Q VKA+YWF S FPV DIDS LFTHLFCAFADL+SQ
Sbjct: 5 KLISLIVSITFFL-TLQCSMAQTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQT 63
Query: 64 FQVTVSSENQAIFSSFTRTVQQKNPAVKALLSIGGGNASKESFAAMASQAASRKSFIDSS 123
QVTVSS NQ FS+FT+TVQ++NP+VK LLSIGGG A K ++A+MAS SRKSFIDSS
Sbjct: 64 NQVTVSSANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSS 123
Query: 124 INLARSLNFHGLDIDWEYPDNA-QMSDFGTLLTEWRSAVAAEARSSGKPALLLTAAVSYS 182
I +ARS FHGLD+DWEYP +A +M++FGTLL EWRSAV AEA SSGKP LLL AAV YS
Sbjct: 124 IRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYS 183
Query: 183 ANYFGAINPTSAISNSLDWTNVMAYDFFYNDDRTGSRITGPPAALFSPDRSQVSGDSGIR 242
NY+ + P SA+++SLDW N+MAYDF+ SR+TGPPAALF P + SGD+G R
Sbjct: 184 NNYYSVLYPVSAVASSLDWVNLMAYDFY---GPGWSRVTGPPAALFDPSNAGPSGDAGTR 240
Query: 243 AWIQSGLSPKKIVLGFPFFGHSLQLANANNHGFWAPTSG--VVNGGTMSYKEIRQFIMST 300
+WIQ+GL KK VLGFP++G++ +L NAN+H ++APT+G + G++ Y +IR+FI+
Sbjct: 241 SWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDN 300
Query: 301 NATKVFNATVVSDYCYSGTTWIGYDDTQSVNTKVKYAKDNGLLGYFAWQISQDDNWILSR 360
AT V+N+TVV DYCY+GT WIGYDD QS+ TKV+YAK GLLGYF+W + DDN LSR
Sbjct: 301 GATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSR 360
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297800072|ref|XP_002867920.1| glycosyl hydrolase family 18 protein [Arabidopsis lyrata subsp. lyrata] gi|297313756|gb|EFH44179.1| glycosyl hydrolase family 18 protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|374719233|gb|AEZ67302.1| chitinase 3 [Populus x canadensis] | Back alignment and taxonomy information |
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| >gi|340780338|pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana gi|340780339|pdb|3AQU|B Chain B, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana gi|340780340|pdb|3AQU|C Chain C, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana gi|340780341|pdb|3AQU|D Chain D, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana | Back alignment and taxonomy information |
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| >gi|255565049|ref|XP_002523517.1| chitinase, putative [Ricinus communis] gi|223537224|gb|EEF38856.1| chitinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224091669|ref|XP_002309324.1| predicted protein [Populus trichocarpa] gi|222855300|gb|EEE92847.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|374719231|gb|AEZ67301.1| chitinase 2 [Populus x canadensis] | Back alignment and taxonomy information |
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| >gi|224145961|ref|XP_002336275.1| predicted protein [Populus trichocarpa] gi|222833653|gb|EEE72130.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224091667|ref|XP_002309323.1| predicted protein [Populus trichocarpa] gi|222855299|gb|EEE92846.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|222139396|gb|ACM45717.1| class V chitinase [Pyrus pyrifolia] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 361 | ||||||
| TAIR|locus:2134025 | 379 | ChiC "class V chitinase" [Arab | 0.930 | 0.886 | 0.622 | 9.4e-114 | |
| TAIR|locus:2134015 | 398 | AT4G19800 [Arabidopsis thalian | 0.914 | 0.829 | 0.560 | 1.3e-98 | |
| TAIR|locus:2134030 | 366 | AT4G19820 [Arabidopsis thalian | 0.930 | 0.918 | 0.546 | 7.4e-98 | |
| TAIR|locus:2133940 | 362 | AT4G19750 [Arabidopsis thalian | 0.914 | 0.911 | 0.492 | 1.3e-82 | |
| TAIR|locus:2133955 | 369 | AT4G19760 [Arabidopsis thalian | 0.914 | 0.894 | 0.492 | 1.1e-80 | |
| TAIR|locus:2134010 | 363 | AT4G19720 [Arabidopsis thalian | 0.897 | 0.892 | 0.491 | 1.4e-78 | |
| TAIR|locus:2134020 | 332 | AT4G19730 [Arabidopsis thalian | 0.844 | 0.918 | 0.482 | 1.6e-70 | |
| TAIR|locus:2133970 | 261 | AT4G19770 [Arabidopsis thalian | 0.684 | 0.946 | 0.519 | 4.1e-65 | |
| UNIPROTKB|E1BZP3 | 473 | CHIA "Uncharacterized protein" | 0.872 | 0.665 | 0.349 | 2.4e-44 | |
| UNIPROTKB|E1BZP6 | 480 | CHIA "Uncharacterized protein" | 0.872 | 0.656 | 0.349 | 2.4e-44 |
| TAIR|locus:2134025 ChiC "class V chitinase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1122 (400.0 bits), Expect = 9.4e-114, P = 9.4e-114
Identities = 213/342 (62%), Positives = 263/342 (76%)
Query: 22 SAGQNAVKAAYWFSGSNFPVADIDSILFTHLFCAFADLDSQNFQVTVSSENQAIFSSFTR 81
S Q VKA+YWF S FPV DIDS LFTHLFCAFADL+SQ QVTVSS NQ FS+FT+
Sbjct: 22 SMAQTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQ 81
Query: 82 TVQQKNPAVKALLSIGGGNASKESFAAMASQAASRKSFIDSSINLARSLNFHGLDIDWEY 141
TVQ++NP+VK LLSIGGG A K ++A+MAS SRKSFIDSSI +ARS FHGLD+DWEY
Sbjct: 82 TVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEY 141
Query: 142 PDNA-QMSDFGTLLTEWRSAVAAEARSSGKPALLLTAAVSYSANYFGAINPTSAISNSLD 200
P +A +M++FGTLL EWRSAV AEA SSGKP LLL AAV YS NY+ + P SA+++SLD
Sbjct: 142 PSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLD 201
Query: 201 WTNVMAYDFFYNDDRTGSRITGPPAALFSPDRSQVSGDSGIRAWIQSGLSPKKIVLGFPF 260
W N+MAYDF+ SR+TGPPAALF P + SGD+G R+WIQ+GL KK VLGFP+
Sbjct: 202 WVNLMAYDFY---GPGWSRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPY 258
Query: 261 FGHSLQLANANNHGFWAPTSG--VVNGGTMSYKEIRQFIMSTNATKVFNATVVSDYCYSG 318
+G++ +L NAN+H ++APT+G + G++ Y +IR+FI+ AT V+N+TVV DYCY+G
Sbjct: 259 YGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNGATTVYNSTVVGDYCYAG 318
Query: 319 TTWIGYDDTQSVNTKVKYAKDNGLLGYFAWQISQDDNWILSR 360
T WIGYDD QS+ TKV+YAK GLLGYF+W + DDN LSR
Sbjct: 319 TNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSR 360
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| TAIR|locus:2134015 AT4G19800 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134030 AT4G19820 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2133940 AT4G19750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2133955 AT4G19760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134010 AT4G19720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134020 AT4G19730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2133970 AT4G19770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BZP3 CHIA "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BZP6 CHIA "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1.14 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.2.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | AT4G19810 | glycosyl hydrolase family 18 protein; glycosyl hydrolase family 18 protein; FUNCTIONS IN- cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN- carbohydrate metabolic process; LOCATED IN- cell wall; EXPRESSED IN- 10 plant structures; EXPRESSED DURING- 4 anthesis, LP.04 four leaves visible, C globular stage; CONTAINS InterPro DOMAIN/s- Glycoside hydrolase, family 18, catalytic domain (InterPro-IPR001223), Chitinase II (InterPro-IPR011583), Glycoside hydrolase, catalytic core (InterPro-IPR017853), Glycoside hydrolase, s [...] (379 aa) | |||||||||
(Arabidopsis thaliana) | |||||||||||
 | HEXO1 | • | 0.899 | ||||||||
 | HEXO3 | • | 0.899 | ||||||||
 | HEXO2 | • | 0.899 | ||||||||
 | ATTI1 | • | • | 0.541 | |||||||
 | ATGSTZ1 | • | 0.538 | ||||||||
 | AT1G01910 | • | 0.534 | ||||||||
 | ATGSTF3 | • | 0.508 | ||||||||
 | AT2G43570 | • | • | 0.506 | |||||||
 | AT1G12810 | • | 0.502 | ||||||||
 | SUS3 | • | 0.460 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 361 | |||
| cd02879 | 299 | cd02879, GH18_plant_chitinase_class_V, The class V | 1e-130 | |
| smart00636 | 334 | smart00636, Glyco_18, Glyco_18 domain | 8e-96 | |
| pfam00704 | 325 | pfam00704, Glyco_hydro_18, Glycosyl hydrolases fam | 6e-80 | |
| cd02872 | 362 | cd02872, GH18_chitolectin_chitotriosidase, This co | 3e-78 | |
| cd06548 | 322 | cd06548, GH18_chitinase, The GH18 (glycosyl hydrol | 5e-58 | |
| COG3325 | 441 | COG3325, ChiA, Chitinase [Carbohydrate transport a | 2e-40 | |
| cd00598 | 210 | cd00598, GH18_chitinase-like, The GH18 (glycosyl h | 8e-34 | |
| cd02873 | 413 | cd02873, GH18_IDGF, The IDGF's (imaginal disc grow | 3e-22 | |
| cd06545 | 253 | cd06545, GH18_3CO4_chitinase, The Bacteroides thet | 1e-18 | |
| cd02874 | 313 | cd02874, GH18_CFLE_spore_hydrolase, Cortical fragm | 2e-13 | |
| cd02878 | 345 | cd02878, GH18_zymocin_alpha, Zymocin, alpha subuni | 1e-12 | |
| cd02875 | 358 | cd02875, GH18_chitobiase, Chitobiase (also known a | 1e-11 | |
| COG3858 | 423 | COG3858, COG3858, Predicted glycosyl hydrolase [Ge | 5e-10 |
| >gnl|CDD|119358 cd02879, GH18_plant_chitinase_class_V, The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes | Back alignment and domain information |
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Score = 374 bits (963), Expect = e-130
Identities = 162/341 (47%), Positives = 212/341 (62%), Gaps = 48/341 (14%)
Query: 25 QNAVKAAYWFSGSN-FPVADIDSILFTHLFCAFADLDSQNFQVTVSSENQAIFSSFTRTV 83
VK YW + S FP ++IDS LFTHLF AFADLD ++V +S +++ FS+FT TV
Sbjct: 1 STIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETV 60
Query: 84 QQKNPAVKALLSIGGGNASKESFAAMASQAASRKSFIDSSINLARSLNFHGLDIDWEYPD 143
++KNP+VK LLSIGGG + +FAAMAS +RK+FI+SSI +AR F GLD+DWE+P
Sbjct: 61 KRKNPSVKTLLSIGGGGSDSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPS 120
Query: 144 NAQ-MSDFGTLLTEWRSAVAAEARSSGKPALLLTAAVSYSANYFGAINPTS----AISNS 198
+ M +FG LL EWR+AV EARSSG+P LLLTAAV +S F + + S AI+ +
Sbjct: 121 SQVEMENFGKLLEEWRAAVKDEARSSGRPPLLLTAAVYFSPILFLSDDSVSYPIEAINKN 180
Query: 199 LDWTNVMAYDFFYNDDRTGSRITGPPAALFSPDRSQVSGDSGIRAWIQSGLSPKKIVLGF 258
LDW NVMAYD++ + + TGP AAL+ P+ S VS D GI++WI++G+ KK+VLG
Sbjct: 181 LDWVNVMAYDYYGSWESNT---TGPAAALYDPN-SNVSTDYGIKSWIKAGVPAKKLVLGL 236
Query: 259 PFFGHSLQLANANNHGFWAPTSGVVNGGTMSYKEIRQFIMSTNATKVFNATVVSDYCYSG 318
P +G + W +++ T VS Y Y+G
Sbjct: 237 PLYGRA-----------W---------------------------TLYDTTTVSSYVYAG 258
Query: 319 TTWIGYDDTQSVNTKVKYAKDNGLLGYFAWQISQDDNWILS 359
TTWIGYDD QS+ KVKYAK GLLGYFAW + DDN LS
Sbjct: 259 TTWIGYDDVQSIAVKVKYAKQKGLLGYFAWAVGYDDNNWLS 299
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The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. Length = 299 |
| >gnl|CDD|214753 smart00636, Glyco_18, Glyco_18 domain | Back alignment and domain information |
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| >gnl|CDD|216071 pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18 | Back alignment and domain information |
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| >gnl|CDD|119351 cd02872, GH18_chitolectin_chitotriosidase, This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases | Back alignment and domain information |
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| >gnl|CDD|119365 cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites | Back alignment and domain information |
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| >gnl|CDD|225862 COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods | Back alignment and domain information |
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| >gnl|CDD|119352 cd02873, GH18_IDGF, The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster | Back alignment and domain information |
|---|
| >gnl|CDD|119362 cd06545, GH18_3CO4_chitinase, The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas | Back alignment and domain information |
|---|
| >gnl|CDD|119353 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination | Back alignment and domain information |
|---|
| >gnl|CDD|119357 cd02878, GH18_zymocin_alpha, Zymocin, alpha subunit | Back alignment and domain information |
|---|
| >gnl|CDD|119354 cd02875, GH18_chitobiase, Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes | Back alignment and domain information |
|---|
| >gnl|CDD|226376 COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| cd02879 | 299 | GH18_plant_chitinase_class_V The class V plant chi | 100.0 | |
| cd02872 | 362 | GH18_chitolectin_chitotriosidase This conserved do | 100.0 | |
| cd02873 | 413 | GH18_IDGF The IDGF's (imaginal disc growth factors | 100.0 | |
| smart00636 | 334 | Glyco_18 Glycosyl hydrolase family 18. | 100.0 | |
| KOG2806 | 432 | consensus Chitinase [Carbohydrate transport and me | 100.0 | |
| cd02878 | 345 | GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin | 100.0 | |
| cd06548 | 322 | GH18_chitinase The GH18 (glycosyl hydrolases, fami | 100.0 | |
| COG3325 | 441 | ChiA Chitinase [Carbohydrate transport and metabol | 100.0 | |
| PF00704 | 343 | Glyco_hydro_18: Glycosyl hydrolases family 18; Int | 100.0 | |
| cd02876 | 318 | GH18_SI-CLP Stabilin-1 interacting chitinase-like | 100.0 | |
| cd02875 | 358 | GH18_chitobiase Chitobiase (also known as di-N-ace | 100.0 | |
| cd02874 | 313 | GH18_CFLE_spore_hydrolase Cortical fragment-lytic | 100.0 | |
| cd06549 | 298 | GH18_trifunctional GH18 domain of an uncharacteriz | 100.0 | |
| cd06545 | 253 | GH18_3CO4_chitinase The Bacteroides thetaiotaomicr | 100.0 | |
| cd00598 | 210 | GH18_chitinase-like The GH18 (glycosyl hydrolase, | 100.0 | |
| COG3858 | 423 | Predicted glycosyl hydrolase [General function pre | 100.0 | |
| cd06546 | 256 | GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase | 100.0 | |
| cd06544 | 253 | GH18_narbonin Narbonin is a plant 2S protein from | 100.0 | |
| cd02871 | 312 | GH18_chitinase_D-like GH18 domain of Chitinase D ( | 99.97 | |
| KOG2091 | 392 | consensus Predicted member of glycosyl hydrolase f | 99.96 | |
| cd02877 | 280 | GH18_hevamine_XipI_class_III This conserved domain | 99.93 | |
| cd06542 | 255 | GH18_EndoS-like Endo-beta-N-acetylglucosaminidases | 99.92 | |
| cd06543 | 294 | GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch | 99.86 | |
| COG3469 | 332 | Chitinase [Carbohydrate transport and metabolism] | 99.79 | |
| KOG4701 | 568 | consensus Chitinase [Cell wall/membrane/envelope b | 99.64 | |
| cd06547 | 339 | GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG | 98.51 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 98.09 | |
| PF03644 | 311 | Glyco_hydro_85: Glycosyl hydrolase family 85 ; Int | 97.95 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 97.95 | |
| PF11340 | 181 | DUF3142: Protein of unknown function (DUF3142); In | 97.54 | |
| KOG2331 | 526 | consensus Predicted glycosylhydrolase [General fun | 94.75 | |
| cd02810 | 289 | DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) | 91.8 | |
| TIGR01370 | 315 | cysRS possible cysteinyl-tRNA synthetase, Methanoc | 91.48 | |
| COG1306 | 400 | Uncharacterized conserved protein [Function unknow | 90.36 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 89.77 | |
| cd04734 | 343 | OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN | 87.24 | |
| cd02930 | 353 | DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin | 86.17 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 84.76 | |
| COG1902 | 363 | NemA NADH:flavin oxidoreductases, Old Yellow Enzym | 84.42 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 84.37 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 83.83 | |
| cd04733 | 338 | OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN | 83.42 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 82.51 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 82.14 | |
| cd02801 | 231 | DUS_like_FMN Dihydrouridine synthase-like (DUS-lik | 82.01 | |
| PF14883 | 294 | GHL13: Hypothetical glycosyl hydrolase family 13 | 81.23 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 80.72 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 80.28 | |
| cd04740 | 296 | DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c | 80.2 |
| >cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-66 Score=474.15 Aligned_cols=292 Identities=55% Similarity=0.984 Sum_probs=262.2
Q ss_pred CcEEEEEeCCCC-CCCCCCCCCCCCcEEEEEEEEeeCCCcEEEeCCcchHHHHHHHHHHHhhCCCceEEEEEcCCCCCch
Q 037639 26 NAVKAAYWFSGS-NFPVADIDSILFTHLFCAFADLDSQNFQVTVSSENQAIFSSFTRTVQQKNPAVKALLSIGGGNASKE 104 (361)
Q Consensus 26 ~~~~~~y~~~~~-~~~~~~~~~~~~thii~~~~~v~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~ 104 (361)
+-+++|||+++. .+.++++|.++||||+|+|+.++++++.+...+.....+.++.+.+|+++|++|+++|||||+.+++
T Consensus 2 ~~~~~~Y~~~w~~~~~~~~i~~~~~THi~yaf~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~lkvlisiGG~~~~s~ 81 (299)
T cd02879 2 TIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETVKRKNPSVKTLLSIGGGGSDSS 81 (299)
T ss_pred CeEEEEEECCCCCCCChhHCCcccCCEEEEEEEEecCCCCEEeeccccHHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCc
Confidence 358899999755 8999999999999999999999988878887776666788888889999999999999999987678
Q ss_pred hHHHHhcCHHHHHHHHHHHHHHHHcCCCcEEEeeecCCCc-cchhhHHHHHHHHHHHHHHHHHhcCCCceEEEEEeeccc
Q 037639 105 SFAAMASQAASRKSFIDSSINLARSLNFHGLDIDWEYPDN-AQMSDFGTLLTEWRSAVAAEARSSGKPALLLTAAVSYSA 183 (361)
Q Consensus 105 ~~~~~~~~~~~r~~f~~~l~~~l~~~~~DGidiD~e~~~~-~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~ls~a~~~~~ 183 (361)
.|+.++++++.|++|++++++++++|+|||||||||+|.. +|+++|+.||++||++|+++++.+++++++||+++++.+
T Consensus 82 ~fs~~~~~~~~R~~fi~siv~~l~~~~fDGidiDWE~P~~~~d~~n~~~ll~elr~~l~~~~~~~~~~~~~ls~av~~~~ 161 (299)
T cd02879 82 AFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPSSQVEMENFGKLLEEWRAAVKDEARSSGRPPLLLTAAVYFSP 161 (299)
T ss_pred hhhHHhCCHHHHHHHHHHHHHHHHHhCCCceeecccCCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcEEEEeecccch
Confidence 9999999999999999999999999999999999999975 899999999999999999877766666799999998765
Q ss_pred cc----ccCCCChhhHhccCCeEEeeeeccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCceEEecc
Q 037639 184 NY----FGAINPTSAISNSLDWTNVMAYDFFYNDDRTGSRITGPPAALFSPDRSQVSGDSGIRAWIQSGLSPKKIVLGFP 259 (361)
Q Consensus 184 ~~----~~~~~~~~~l~~~vD~v~lm~yd~~~~~~~~~~~~~~~~spl~~~~~~~~~~~~~~~~~~~~g~~~~KivlGlp 259 (361)
.. ....|++++|.++||+|+||+||+| |+ |. ...+++++||+.+. +..+++.+|++|+..|+|++||+||+|
T Consensus 162 ~~~~~~~~~~yd~~~l~~~vD~i~vMtYD~~-g~-~~-~~~~~~~a~l~~~~-~~~~~~~~v~~~~~~g~p~~KlvlGvp 237 (299)
T cd02879 162 ILFLSDDSVSYPIEAINKNLDWVNVMAYDYY-GS-WE-SNTTGPAAALYDPN-SNVSTDYGIKSWIKAGVPAKKLVLGLP 237 (299)
T ss_pred hhccccccccCCHHHHHhhCCEEEEEeeccc-CC-CC-CCCCCCCCcCCCCC-CCCCHHHHHHHHHHcCCCHHHEEEEec
Confidence 43 3456899999999999999999999 98 72 23578899999765 567899999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCCccCCCCcccchHHHHHHhhcCCcEEEEecceeeEEEEeCCEEEEECCHHHHHHHHHHHHH
Q 037639 260 FFGHSLQLANANNHGFWAPTSGVVNGGTMSYKEIRQFIMSTNATKVFNATVVSDYCYSGTTWIGYDDTQSVNTKVKYAKD 339 (361)
Q Consensus 260 ~yG~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~i~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y~d~~S~~~K~~~~~~ 339 (361)
+|||.|++ ||+.++++|.|++++||+|||++|++.|++|+++
T Consensus 238 ~YGr~~~~--------------------------------------~D~~~~~~y~~~~~~wi~ydd~~Si~~K~~~a~~ 279 (299)
T cd02879 238 LYGRAWTL--------------------------------------YDTTTVSSYVYAGTTWIGYDDVQSIAVKVKYAKQ 279 (299)
T ss_pred cccccccc--------------------------------------cCCCcceEEEEECCEEEEeCCHHHHHHHHHHHHh
Confidence 99999962 7888889999999999999999999999999999
Q ss_pred cCCceEEEeeecCCCCcCcc
Q 037639 340 NGLLGYFAWQISQDDNWILS 359 (361)
Q Consensus 340 ~gl~Gv~iW~l~~Dd~~~l~ 359 (361)
+||||+|+|++++||...|+
T Consensus 280 ~~lgGv~~W~l~~Dd~~~~~ 299 (299)
T cd02879 280 KGLLGYFAWAVGYDDNNWLS 299 (299)
T ss_pred CCCCeEEEEEeecCCccccC
Confidence 99999999999999987663
|
The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. |
| >cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases | Back alignment and domain information |
|---|
| >cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster | Back alignment and domain information |
|---|
| >smart00636 Glyco_18 Glycosyl hydrolase family 18 | Back alignment and domain information |
|---|
| >KOG2806 consensus Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd02878 GH18_zymocin_alpha Zymocin, alpha subunit | Back alignment and domain information |
|---|
| >cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites | Back alignment and domain information |
|---|
| >COG3325 ChiA Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome | Back alignment and domain information |
|---|
| >cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes | Back alignment and domain information |
|---|
| >cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination | Back alignment and domain information |
|---|
| >cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain | Back alignment and domain information |
|---|
| >cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas | Back alignment and domain information |
|---|
| >cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods | Back alignment and domain information |
|---|
| >COG3858 Predicted glycosyl hydrolase [General function prediction only] | Back alignment and domain information |
|---|
| >cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii | Back alignment and domain information |
|---|
| >cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L | Back alignment and domain information |
|---|
| >cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) | Back alignment and domain information |
|---|
| >KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain | Back alignment and domain information |
|---|
| >cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins | Back alignment and domain information |
|---|
| >cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain | Back alignment and domain information |
|---|
| >COG3469 Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins | Back alignment and domain information |
|---|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
| >PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
| >PF11340 DUF3142: Protein of unknown function (DUF3142); InterPro: IPR021488 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
| >KOG2331 consensus Predicted glycosylhydrolase [General function prediction only] | Back alignment and domain information |
|---|
| >cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain | Back alignment and domain information |
|---|
| >TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type | Back alignment and domain information |
|---|
| >COG1306 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
| >cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 | Back alignment and domain information |
|---|
| >cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain | Back alignment and domain information |
|---|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
| >cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2 | Back alignment and domain information |
|---|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >cd02801 DUS_like_FMN Dihydrouridine synthase-like (DUS-like) FMN-binding domain | Back alignment and domain information |
|---|
| >PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 | Back alignment and domain information |
|---|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
| >cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 361 | ||||
| 3aqu_A | 356 | Crystal Structure Of A Class V Chitinase From Arabi | 1e-122 | ||
| 3alf_A | 353 | Crystal Structure Of Class V Chitinase From Nicotia | 1e-101 | ||
| 3alg_A | 353 | Crystal Structure Of Class V Chitinase (E115q Mutan | 1e-101 | ||
| 1hkk_A | 364 | High Resoultion Crystal Structure Of Human Chitinas | 1e-43 | ||
| 1lg1_A | 365 | Crystal Structure Of Human Chitotriosidase In Compl | 1e-43 | ||
| 1hki_A | 365 | Crystal Structure Of Human Chitinase In Complex Wit | 1e-43 | ||
| 1waw_A | 445 | Specificity And Affinity Of Natural Product Cyclope | 2e-43 | ||
| 1guv_A | 366 | Structure Of Human Chitotriosidase Length = 366 | 3e-43 | ||
| 4ay1_A | 365 | Human Ykl-39 Is A Pseudo-Chitinase With Retained Ch | 6e-40 | ||
| 3fxy_A | 395 | Acidic Mammalian Chinase, Catalytic Domain Length = | 1e-39 | ||
| 2ybt_A | 381 | Crystal Structure Of Human Acidic Chitinase In Comp | 1e-39 | ||
| 1hjv_A | 362 | Crystal Structure Of Hcgp-39 In Complex With Chitin | 2e-39 | ||
| 1e9l_A | 377 | The Crystal Structure Of Novel Mammalian Lectin Ym1 | 1e-38 | ||
| 1ljy_A | 361 | Crystal Structure Of A Novel Regulatory 40 Kda Mamm | 2e-34 | ||
| 1sr0_A | 361 | Crystal Structure Of Signalling Protein From Sheep( | 3e-34 | ||
| 1syt_A | 361 | Crystal Structure Of Signalling Protein From Goat S | 4e-34 | ||
| 2pi6_A | 361 | Crystal Structure Of The Sheep Signalling Glycoprot | 2e-33 | ||
| 1zbv_A | 361 | Crystal Structure Of The Goat Signalling Protein (S | 2e-33 | ||
| 1owq_A | 361 | Crystal Structure Of A 40 Kda Signalling Protein (S | 7e-33 | ||
| 1xhg_A | 361 | Crystal Structure Of A 40 Kda Signalling Protein Fr | 8e-33 | ||
| 2esc_A | 361 | Crystal Structure Of A 40 Kda Protective Signalling | 1e-32 | ||
| 1tfv_A | 361 | Crystal Structure Of A Buffalo Signaling Glycoprote | 2e-31 | ||
| 1itx_A | 419 | Catalytic Domain Of Chitinase A1 From Bacillus Circ | 2e-26 | ||
| 1d2k_A | 392 | C. Immitis Chitinase 1 At 2.2 Angstroms Resolution | 2e-26 | ||
| 1ll7_A | 392 | Structure Of The E171q Mutant Of C. Immitis Chitina | 7e-26 | ||
| 1w9p_A | 433 | Specificity And Affinity Of Natural Product Cyclope | 7e-26 | ||
| 1wno_A | 395 | Crystal Structure Of A Native Chitinase From Asperg | 7e-26 | ||
| 1ll6_A | 392 | Structure Of The D169n Mutant Of C. Immitis Chitina | 9e-26 | ||
| 2wk2_A | 540 | Chitinase A From Serratia Marcescens Atcc990 In Com | 8e-19 | ||
| 1rd6_A | 563 | Crystal Structure Of S. Marcescens Chitinase A Muta | 9e-19 | ||
| 2wly_A | 548 | Chitinase A From Serratia Marcescens Atcc990 In Com | 9e-19 | ||
| 1ctn_A | 540 | Crystal Structure Of A Bacterial Chitinase At 2.3 A | 1e-18 | ||
| 1edq_A | 540 | Crystal Structure Of Chitinase A From S. Marcescens | 1e-18 | ||
| 3g6l_A | 406 | The Crystal Structure Of A Chitinase Crchi1 From Th | 1e-18 | ||
| 1kfw_A | 435 | Structure Of Catalytic Domain Of Psychrophilic Chit | 3e-18 | ||
| 1ehn_A | 540 | Crystal Structure Of Chitinase A Mutant E315q Compl | 4e-18 | ||
| 1ffr_A | 540 | Crystal Structure Of Chitinase A Mutant Y390f Compl | 4e-18 | ||
| 1h0g_A | 499 | Complex Of A Chitinase With The Natural Product Cyc | 6e-18 | ||
| 1e15_A | 499 | Chitinase B From Serratia Marcescens Length = 499 | 6e-18 | ||
| 1e6z_A | 498 | Chitinase B From Serratia Marcescens Wildtype In Co | 7e-18 | ||
| 1nh6_A | 540 | Structure Of S. Marcescens Chitinase A, E315l, Comp | 1e-17 | ||
| 1eib_A | 540 | Crystal Structure Of Chitinase A Mutant D313a Compl | 1e-17 | ||
| 1k9t_A | 540 | Chitinase A Complexed With Tetra-N-Acetylchitotrios | 1e-17 | ||
| 1e6n_B | 499 | Chitinase B From Serratia Marcescens Inactive Mutan | 2e-17 | ||
| 1ur9_A | 499 | Interactions Of A Family 18 Chitinase With The Desi | 2e-17 | ||
| 1ogb_A | 499 | Chitinase B From Serratia Marcescens Mutant D142n L | 2e-17 | ||
| 1goi_A | 499 | Crystal Structure Of The D140n Mutant Of Chitinase | 2e-17 | ||
| 3ars_A | 584 | Crystal Structure Analysis Of Chitinase A From Vibr | 8e-15 | ||
| 3b8s_A | 584 | Crystal Structure Of Wild-Type Chitinase A From Vib | 1e-13 | ||
| 3b9a_A | 584 | Crystal Structure Of Vibrio Harveyi Chitinase A Com | 1e-12 | ||
| 1jnd_A | 420 | Crystal Structure Of Imaginal Disc Growth Factor-2 | 2e-12 | ||
| 3qok_A | 420 | Crystal Structure Of Putative Chitinase Ii From Kle | 2e-11 | ||
| 4a5q_A | 546 | Crystal Structure Of The Chitinase Chi1 Fitted Into | 6e-09 | ||
| 3oa5_A | 574 | The Structure Of Chi1, A Chitinase From Yersinia En | 6e-09 | ||
| 4dws_A | 546 | Crystal Structure Of A Chitinase From The Yersinia | 4e-08 | ||
| 4dws_C | 546 | Crystal Structure Of A Chitinase From The Yersinia | 9e-08 | ||
| 4dws_D | 546 | Crystal Structure Of A Chitinase From The Yersinia | 1e-07 | ||
| 4dws_B | 546 | Crystal Structure Of A Chitinase From The Yersinia | 1e-07 | ||
| 3co4_A | 312 | Crystal Structure Of A Chitinase From Bacteroides T | 1e-04 |
| >pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana Length = 356 | Back alignment and structure |
|
| >pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum Length = 353 | Back alignment and structure |
| >pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 Length = 353 | Back alignment and structure |
| >pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin Length = 364 | Back alignment and structure |
| >pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose Length = 365 | Back alignment and structure |
| >pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With Glucoallosamidin B Length = 365 | Back alignment and structure |
| >pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitor Argadin Against Human Chitinase Length = 445 | Back alignment and structure |
| >pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase Length = 366 | Back alignment and structure |
| >pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained Chitooligosaccharide Binding Properties Length = 365 | Back alignment and structure |
| >pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain Length = 395 | Back alignment and structure |
| >pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex With Bisdionin C Length = 381 | Back alignment and structure |
| >pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin Tetramer Length = 362 | Back alignment and structure |
| >pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1 Suggests A Saccharide Binding Site Length = 377 | Back alignment and structure |
| >pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary Gland Protein (Mgp-40) Secreted During Involution Length = 361 | Back alignment and structure |
| >pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40) At 3.0a Resolution Using Crystal Grown In The Presence Of Polysaccharides Length = 361 | Back alignment and structure |
| >pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40 In The Presense Of N,n',n''-triacetyl-chitotriose At 2.6a Resolution Length = 361 | Back alignment and structure |
| >pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein (Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a Resolution Reveals Specific Binding Characteristics Of Sps-40 Length = 361 | Back alignment and structure |
| >pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40) Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a Resolution Length = 361 | Back alignment and structure |
| >pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40) Secreted During Involution Length = 361 | Back alignment and structure |
| >pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From Porcine (spp-40) At 2.89a Resolution Length = 361 | Back alignment and structure |
| >pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling Protein From Bovine (Spc-40) At 2.1 A Resolution Length = 361 | Back alignment and structure |
| >pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein (Spb-40) Secreted During Involution Length = 361 | Back alignment and structure |
| >pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 Length = 419 | Back alignment and structure |
| >pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution Length = 392 | Back alignment and structure |
| >pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1 Length = 392 | Back alignment and structure |
| >pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human And Bacterial Chitinasefra Length = 433 | Back alignment and structure |
| >pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407 Length = 395 | Back alignment and structure |
| >pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1 Length = 392 | Back alignment and structure |
| >pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline Dithioamide Length = 540 | Back alignment and structure |
| >pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant W167a Length = 563 | Back alignment and structure |
| >pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline. Length = 548 | Back alignment and structure |
| >pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3 Angstroms Resolution Length = 540 | Back alignment and structure |
| >pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At 1.55 Angstroms Length = 540 | Back alignment and structure |
| >pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The Nematophagous Fungus Clonostachys Rosea Length = 406 | Back alignment and structure |
| >pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B From Arthrobacter Tad20 Length = 435 | Back alignment and structure |
| >pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 | Back alignment and structure |
| >pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed With Hexa-n- Acetylchitohexaose (nag)6 Length = 540 | Back alignment and structure |
| >pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product Cyclopentapeptide Argadin From Clonostachys Length = 499 | Back alignment and structure |
| >pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens Length = 499 | Back alignment and structure |
| >pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate Length = 498 | Back alignment and structure |
| >pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex With Hexasaccharide Length = 540 | Back alignment and structure |
| >pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 | Back alignment and structure |
| >pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose Length = 540 | Back alignment and structure |
| >pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q In Complex With N-Acetylglucosamine-Pentamer Length = 499 | Back alignment and structure |
| >pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed Inhibitor Hm508, And Its Degradation Product, Chitobiono-Delta-Lactone Length = 499 | Back alignment and structure |
| >pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n Length = 499 | Back alignment and structure |
| >pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From Serratia Marcescens At 1.45 A Resolution Length = 499 | Back alignment and structure |
| >pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio Harveyi With Novel Inhibitors - Apo Structure Of Mutant W275g Length = 584 | Back alignment and structure |
| >pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio Harveyi Length = 584 | Back alignment and structure |
| >pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed With Hexasaccharide Length = 584 | Back alignment and structure |
| >pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2 Length = 420 | Back alignment and structure |
| >pdb|3QOK|A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae Length = 420 | Back alignment and structure |
| >pdb|4A5Q|A Chain A, Crystal Structure Of The Chitinase Chi1 Fitted Into The 3d Structure Of The Yersinia Entomophaga Toxin Complex Length = 546 | Back alignment and structure |
| >pdb|3OA5|A Chain A, The Structure Of Chi1, A Chitinase From Yersinia Entomophaga Length = 574 | Back alignment and structure |
| >pdb|4DWS|A Chain A, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 | Back alignment and structure |
| >pdb|4DWS|C Chain C, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 | Back alignment and structure |
| >pdb|4DWS|D Chain D, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 | Back alignment and structure |
| >pdb|4DWS|B Chain B, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 | Back alignment and structure |
| >pdb|3CO4|A Chain A, Crystal Structure Of A Chitinase From Bacteroides Thetaiotaomicron Length = 312 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Length = 356 | Back alignment and structure |
|---|
Score = 388 bits (999), Expect = e-135
Identities = 211/340 (62%), Positives = 260/340 (76%), Gaps = 8/340 (2%)
Query: 25 QNAVKAAYWFSGSNFPVADIDSILFTHLFCAFADLDSQNFQVTVSSENQAIFSSFTRTVQ 84
Q VKA+YWF S FPV DIDS LFTHLFCAFADL+SQ QVTVSS NQ FS+FT+TVQ
Sbjct: 2 QTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQ 61
Query: 85 QKNPAVKALLSIGGGNASKESFAAMASQAASRKSFIDSSINLARSLNFHGLDIDWEYPDN 144
++NP+VK LLSIGGG A K ++A+MAS SRKSFIDSSI +ARS FHGLD+DWEYP +
Sbjct: 62 RRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSS 121
Query: 145 A-QMSDFGTLLTEWRSAVAAEARSSGKPALLLTAAVSYSANYFGAINPTSAISNSLDWTN 203
A +M++FGTLL EWRSAV AEA SSGKP LLL AAV YS NY+ + P SA+++SLDW N
Sbjct: 122 ATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVN 181
Query: 204 VMAYDFF-YNDDRTGSRITGPPAALFSPDRSQVSGDSGIRAWIQSGLSPKKIVLGFPFFG 262
+MAYDF+ R TGPPAALF P + SGD+G R+WIQ+GL KK VLGFP++G
Sbjct: 182 LMAYDFYGPGWSRV----TGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYG 237
Query: 263 HSLQLANANNHGFWAPTSG--VVNGGTMSYKEIRQFIMSTNATKVFNATVVSDYCYSGTT 320
++ +L NAN+H ++APT+G + G++ Y +IR+FI+ AT V+N+TVV DYCY+GT
Sbjct: 238 YAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNGATTVYNSTVVGDYCYAGTN 297
Query: 321 WIGYDDTQSVNTKVKYAKDNGLLGYFAWQISQDDNWILSR 360
WIGYDD QS+ TKV+YAK GLLGYF+W + DDN LSR
Sbjct: 298 WIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSR 337
|
| >3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Length = 353 | Back alignment and structure |
|---|
| >4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
| >1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Length = 377 | Back alignment and structure |
|---|
| >1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 | Back alignment and structure |
|---|
| >3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Length = 395 | Back alignment and structure |
|---|
| >2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Length = 361 | Back alignment and structure |
|---|
| >1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Length = 433 | Back alignment and structure |
|---|
| >3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Length = 406 | Back alignment and structure |
|---|
| >1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Length = 392 | Back alignment and structure |
|---|
| >1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Length = 419 | Back alignment and structure |
|---|
| >3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Length = 420 | Back alignment and structure |
|---|
| >1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Length = 499 | Back alignment and structure |
|---|
| >1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Length = 420 | Back alignment and structure |
|---|
| >3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Length = 312 | Back alignment and structure |
|---|
| >1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Length = 435 | Back alignment and structure |
|---|
| >1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Length = 540 | Back alignment and structure |
|---|
| >3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Length = 574 | Back alignment and structure |
|---|
| >3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Length = 584 | Back alignment and structure |
|---|
| >3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Length = 319 | Back alignment and structure |
|---|
| >3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Length = 275 | Back alignment and structure |
|---|
| >3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Length = 393 | Back alignment and structure |
|---|
| >3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Length = 333 | Back alignment and structure |
|---|
| >1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Length = 271 | Back alignment and structure |
|---|
| >2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Length = 290 | Back alignment and structure |
|---|
| >3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Length = 321 | Back alignment and structure |
|---|
| >1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Length = 290 | Back alignment and structure |
|---|
| >2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Length = 289 | Back alignment and structure |
|---|
| >3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Length = 302 | Back alignment and structure |
|---|
| >3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Length = 451 | Back alignment and structure |
|---|
| >2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Length = 311 | Back alignment and structure |
|---|
| >3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* Length = 273 | Back alignment and structure |
|---|
| >1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* Length = 290 | Back alignment and structure |
|---|
| >2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* Length = 310 | Back alignment and structure |
|---|
| >1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 Length = 299 | Back alignment and structure |
|---|
| >2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* Length = 294 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| 3aqu_A | 356 | AT4G19810; stress response, TIM barrel, hydrolase, | 100.0 | |
| 3alf_A | 353 | Chitinase, class V; hydrolase; 1.20A {Nicotiana ta | 100.0 | |
| 3fy1_A | 395 | Amcase, TSA1902, acidic mammalian chitinase; struc | 100.0 | |
| 4ay1_A | 365 | Chitinase-3-like protein 2; chilectin, lectin, chi | 100.0 | |
| 1vf8_A | 377 | YM1, secretory protein; chitinase, CHI-lectin, str | 100.0 | |
| 2pi6_A | 361 | Chitinase-3-like protein 1; complex, signaling pro | 100.0 | |
| 1wb0_A | 445 | Chitinase 1, chitotriosidase 1; cyclopentapeptide | 100.0 | |
| 1itx_A | 419 | Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) | 100.0 | |
| 3qok_A | 420 | Putative chitinase II; structural genomics, PSI-bi | 100.0 | |
| 3g6m_A | 406 | Chitinase, crchi1; inhibitor, caffeine, glycosidas | 100.0 | |
| 1goi_A | 499 | Chitinase B; chitin degradation, hydrolase, glycos | 100.0 | |
| 1kfw_A | 435 | Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob | 100.0 | |
| 1ll7_A | 392 | Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { | 100.0 | |
| 1edq_A | 540 | Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 | 100.0 | |
| 1jnd_A | 420 | Imaginal DISC growth factor-2; IDGF, chitinase, in | 100.0 | |
| 3arx_A | 584 | Chitinase A; TIM barrel, inhibitor complex, glycos | 100.0 | |
| 1w9p_A | 433 | Chitinase; peptide inhibitors, argifin, argadin, g | 100.0 | |
| 3oa5_A | 574 | CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers | 100.0 | |
| 3cz8_A | 319 | Putative sporulation-specific glycosylase YDHD; st | 100.0 | |
| 3bxw_B | 393 | Chitinase domain-containing protein 1; TIM barrel, | 100.0 | |
| 3fnd_A | 312 | Chitinase; TIM-barrel, structural genomics, PSI-2, | 100.0 | |
| 1nar_A | 290 | Narbonin; plant SEED protein; 1.80A {Vicia narbone | 100.0 | |
| 3sim_A | 275 | Protein, family 18 chitinase; family 18 plant chit | 100.0 | |
| 3n12_A | 333 | Chitinase A, chinctu2; zinc atoms, complex, hydrol | 100.0 | |
| 2y8v_A | 290 | CHIC, class III chitinase, putative; afchic, hydro | 100.0 | |
| 4axn_A | 328 | Chitinase C1; hydrolase; 1.68A {Serratia marcescen | 100.0 | |
| 3ian_A | 321 | Chitinase; structural genomics, hydrolase, glycosi | 100.0 | |
| 3ebv_A | 302 | Chinitase A; chitinase A, CHIA, glycosidase, struc | 100.0 | |
| 4ac1_X | 283 | Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g | 100.0 | |
| 2hvm_A | 273 | Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He | 99.98 | |
| 2gsj_A | 271 | Protein PPL-2; mimosoideae, chimerolectin, endochi | 99.97 | |
| 2uy2_A | 294 | Endochitinase; carbohydrate metabolism, polysaccha | 99.97 | |
| 1edt_A | 271 | Endo-beta-N-acetylglucosaminidase H, endo H; hydro | 99.97 | |
| 1cnv_A | 299 | Concanavalin B; plant chitinase, chitin binding pr | 99.96 | |
| 2xtk_A | 310 | CHIA1, class III chitinase CHIA1; hydrolase, GH18; | 99.96 | |
| 2ebn_A | 289 | Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl | 99.94 | |
| 1ta3_A | 274 | XIP-1, xylanase inhibitor protein I; beta alpha ba | 99.94 | |
| 1eok_A | 290 | Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b | 99.94 | |
| 3mu7_A | 273 | XAIP-II, xylanase and alpha-amylase inhibitor prot | 99.9 | |
| 3poh_A | 451 | Endo-beta-N-acetylglucosaminidase F1; TIM barrel, | 99.84 | |
| 2dsk_A | 311 | Chitinase; catalytic domain, active domain, crysta | 99.82 | |
| 2w91_A | 653 | Endo-beta-N-acetylglucosaminidase D; hydrolase, N- | 97.63 | |
| 2vtf_A | 626 | Endo-beta-N-acetylglucosaminidase; hydrolase, fami | 97.62 | |
| 3gdb_A | 937 | Endo-D, putative uncharacterized protein SPR0440; | 90.09 | |
| 2aam_A | 309 | Hypothetical protein TM1410; structural genomics, | 89.19 | |
| 3vmn_A | 643 | Dextranase; TIM barrel, immunoglobrin fold, greek- | 86.23 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 85.17 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 84.34 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 84.32 |
| >3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-74 Score=537.02 Aligned_cols=333 Identities=63% Similarity=1.091 Sum_probs=304.5
Q ss_pred CcEEEEEeCCCCCCCCCCCCCCCCcEEEEEEEEeeCCCcEEEeCCcchHHHHHHHHHHHhhCCCceEEEEEcCCCCCchh
Q 037639 26 NAVKAAYWFSGSNFPVADIDSILFTHLFCAFADLDSQNFQVTVSSENQAIFSSFTRTVQQKNPAVKALLSIGGGNASKES 105 (361)
Q Consensus 26 ~~~~~~y~~~~~~~~~~~~~~~~~thii~~~~~v~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~ 105 (361)
+.+++|||-....+.++++|.++||||+|+|+.++++++++.+.+..+..+.++++.+|+++|++|+++|||||+.++..
T Consensus 3 ~~~~~gY~~~~~~~~~~~i~~~~~THi~yaF~~i~~~~~~v~~~~~~~~~~~~~~~~lk~~~~~lkvllsiGGw~~~~~~ 82 (356)
T 3aqu_A 3 TVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTA 82 (356)
T ss_dssp CCEEEEEECGGGCCCGGGSCGGGCSEEEEEEEEEETTTTEEECCTTTHHHHHHHHHHHTTTCTTCEEEEEEECTTSCHHH
T ss_pred ceEEEEEEeCCCCCCHHHCCcccCCEEEEEEEEecCCCCEEEeCCccHHHHHHHHHHHHhhCCCceEEEEECCCCCCcch
Confidence 46899999545678999999999999999999999887789888776677888888899999999999999999866789
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHcCCCcEEEeeecCCC-ccchhhHHHHHHHHHHHHHHHHHhcCCCceEEEEEeecccc
Q 037639 106 FAAMASQAASRKSFIDSSINLARSLNFHGLDIDWEYPD-NAQMSDFGTLLTEWRSAVAAEARSSGKPALLLTAAVSYSAN 184 (361)
Q Consensus 106 ~~~~~~~~~~r~~f~~~l~~~l~~~~~DGidiD~e~~~-~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~ls~a~~~~~~ 184 (361)
|+.++++++.|++|++++++++++|||||||||||+|. .+++++|+.||++||++|+++++.+++++++||+++|+.+.
T Consensus 83 f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~~~~~g~~~~~Ls~av~~~~~ 162 (356)
T 3aqu_A 83 YASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNN 162 (356)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEEESSSE
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHhCCCeEEEEEeecCChhHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEeccCCch
Confidence 99999999999999999999999999999999999995 58999999999999999999888777777999999997655
Q ss_pred cccCCCChhhHhccCCeEEeeeeccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCceEEeccccccc
Q 037639 185 YFGAINPTSAISNSLDWTNVMAYDFFYNDDRTGSRITGPPAALFSPDRSQVSGDSGIRAWIQSGLSPKKIVLGFPFFGHS 264 (361)
Q Consensus 185 ~~~~~~~~~~l~~~vD~v~lm~yd~~~~~~~~~~~~~~~~spl~~~~~~~~~~~~~~~~~~~~g~~~~KivlGlp~yG~~ 264 (361)
.....|+++++.+++|||+||+||+| |+.| +..++|++||+++.....+++.++++|++.|+|++||+||+|+|||+
T Consensus 163 ~~~~~~d~~~l~~~vD~inlMtYD~~-g~~w--~~~~g~~apl~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~YGr~ 239 (356)
T 3aqu_A 163 YYSVLYPVSAVASSLDWVNLMAYDFY-GPGW--SRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYGYA 239 (356)
T ss_dssp ETTEECCHHHHHHHCSEEEEECCCCC-CTTT--CSBCCCTTCSCCTTCSSCCHHHHHHHHHHTTCCGGGEEEEEESEEEE
T ss_pred hhhccCCHHHHhhhccEEEEEeeecc-cCCC--CCCcCCCCcCCCCCCCCccHHHHHHHHHHcCCCHHHEEEEeccceee
Confidence 44456899999999999999999999 8657 67899999999765346789999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCccCC--CCcccchHHHHHHhhcCCcEEEEecceeeEEEEeCCEEEEECCHHHHHHHHHHHHHcCC
Q 037639 265 LQLANANNHGFWAPTSGVV--NGGTMSYKEIRQFIMSTNATKVFNATVVSDYCYSGTTWIGYDDTQSVNTKVKYAKDNGL 342 (361)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~--~~g~~~y~~i~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y~d~~S~~~K~~~~~~~gl 342 (361)
|++.++.++++++|+.|++ .+|.++|.|||+++++.+++..||+.++++|.|++++||+|||++|++.|++|++++||
T Consensus 240 ~~~~~~~~~~~~~p~~g~~~~~~g~~~y~ei~~~l~~~g~~~~~D~~~~~~y~y~~~~~v~ydd~~Si~~K~~~~~~~gL 319 (356)
T 3aqu_A 240 WRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNGATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGL 319 (356)
T ss_dssp EEESCTTCCSTTCBEEEECSSTTCEEEHHHHHHHHHHHTCEEEEETTTTEEEEEETTEEEEECCHHHHHHHHHHHHHTTC
T ss_pred eEecCCcCCCCCCCCCCCCCCCCCeeeHHHHHHHHhcCCCeEEEchhhceEEEEeCCEEEEeCCHHHHHHHHHHHHhCCC
Confidence 9999988999999988765 56899999999999888999999999999999999999999999999999999999999
Q ss_pred ceEEEeeecCCCCcCcccC
Q 037639 343 LGYFAWQISQDDNWILSRE 361 (361)
Q Consensus 343 ~Gv~iW~l~~Dd~~~l~~~ 361 (361)
||+|+|++++||.++|++|
T Consensus 320 gGv~~W~l~~Dd~~~ll~a 338 (356)
T 3aqu_A 320 LGYFSWHVGADDNSGLSRA 338 (356)
T ss_dssp CEEEEECGGGSSTTHHHHH
T ss_pred CeEEEEeccCCCCchHHHH
Confidence 9999999999999999875
|
| >3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* | Back alignment and structure |
|---|
| >3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* | Back alignment and structure |
|---|
| >4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
| >1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A | Back alignment and structure |
|---|
| >2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... | Back alignment and structure |
|---|
| >1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* | Back alignment and structure |
|---|
| >1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 | Back alignment and structure |
|---|
| >3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* | Back alignment and structure |
|---|
| >1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* | Back alignment and structure |
|---|
| >1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 | Back alignment and structure |
|---|
| >1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A | Back alignment and structure |
|---|
| >1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* | Back alignment and structure |
|---|
| >1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* | Back alignment and structure |
|---|
| >3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* | Back alignment and structure |
|---|
| >1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* | Back alignment and structure |
|---|
| >3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A | Back alignment and structure |
|---|
| >3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
| >3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A | Back alignment and structure |
|---|
| >1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 | Back alignment and structure |
|---|
| >3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} | Back alignment and structure |
|---|
| >3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* | Back alignment and structure |
|---|
| >2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} | Back alignment and structure |
|---|
| >4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} | Back alignment and structure |
|---|
| >3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
| >3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} | Back alignment and structure |
|---|
| >4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} | Back alignment and structure |
|---|
| >2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* | Back alignment and structure |
|---|
| >2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} | Back alignment and structure |
|---|
| >2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* | Back alignment and structure |
|---|
| >1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A | Back alignment and structure |
|---|
| >1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 | Back alignment and structure |
|---|
| >2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* | Back alignment and structure |
|---|
| >2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 | Back alignment and structure |
|---|
| >1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A* | Back alignment and structure |
|---|
| >1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* | Back alignment and structure |
|---|
| >3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* | Back alignment and structure |
|---|
| >3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A | Back alignment and structure |
|---|
| >2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A* | Back alignment and structure |
|---|
| >2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A* | Back alignment and structure |
|---|
| >3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A | Back alignment and structure |
|---|
| >2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 | Back alignment and structure |
|---|
| >3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* | Back alignment and structure |
|---|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 361 | ||||
| d1goia2 | 356 | c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic | 7e-46 | |
| d1wb0a1 | 297 | c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma | 1e-42 | |
| d1wb0a1 | 297 | c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma | 2e-08 | |
| d1vf8a1 | 302 | c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin | 2e-39 | |
| d1vf8a1 | 302 | c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin | 3e-05 | |
| d2pi6a1 | 292 | c.1.8.5 (A:1-239,A:308-361) Signal processing prot | 1e-38 | |
| d2pi6a1 | 292 | c.1.8.5 (A:1-239,A:308-361) Signal processing prot | 9e-08 | |
| d1w9pa1 | 333 | c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil | 1e-37 | |
| d1edqa2 | 358 | c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt | 3e-36 | |
| d1edqa2 | 358 | c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt | 8e-06 | |
| d1jnda1 | 327 | c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f | 1e-34 | |
| d1jnda1 | 327 | c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f | 6e-08 | |
| d1ll7a1 | 330 | c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus ( | 5e-34 | |
| d1nara_ | 289 | c.1.8.5 (A:) Seed storage protein {Vicia narbonens | 1e-29 | |
| d1itxa1 | 347 | c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu | 1e-28 | |
| d1kfwa1 | 374 | c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina | 4e-28 | |
| d1kfwa1 | 374 | c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina | 6e-08 | |
| d1edta_ | 265 | c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {St | 2e-25 | |
| d2ebna_ | 285 | c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl | 3e-25 | |
| d2hvma_ | 273 | c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para | 1e-14 | |
| d1vf8a2 | 70 | d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mo | 5e-13 | |
| d1ta3a_ | 274 | c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I { | 2e-12 | |
| d1eoka_ | 282 | c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl | 6e-11 | |
| d1wb0a2 | 68 | d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo | 1e-10 | |
| d2pi6a2 | 68 | d.26.3.1 (A:240-307) Signal processing protein (SP | 2e-09 | |
| d1cnva_ | 283 | c.1.8.5 (A:) Seed storage protein {Jack bean (Cana | 2e-08 | |
| d1itxa2 | 72 | d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circul | 5e-08 | |
| d1kfwa2 | 61 | d.26.3.1 (A:328-388) Psychrophilic chitinase B {Ar | 1e-06 | |
| d1edqa3 | 73 | d.26.3.1 (A:444-516) Chitinase A {Serratia marcesc | 5e-06 |
| >d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase B, catalytic domain species: Serratia marcescens [TaxId: 615]
Score = 158 bits (400), Expect = 7e-46
Identities = 73/340 (21%), Positives = 119/340 (35%), Gaps = 55/340 (16%)
Query: 30 AAYWFSGSNFPVADIDSIL---FTHLFCAFADLDSQNFQVTVSSENQAIFSSF---TRTV 83
S FPV++I TH+ +F D++S + N A +
Sbjct: 20 TETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTAL 79
Query: 84 QQKNPAVKALLSIGGGNASKE------SFAAMASQAASRKSFIDSSINLARSLNFHGLDI 137
+ NP+++ + SIGG S + ++ ASR F S + + + F G++I
Sbjct: 80 KAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNI 139
Query: 138 DWEYPDNAQMSDFGTLLTEWRSAVAAEARSSGKPAL---LLTAAVSYSANYFGAINPTSA 194
DWEYP A++ F L E R+ + + + G+ AL L A + + +
Sbjct: 140 DWEYPQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQ 199
Query: 195 ISNSLDWTNVMAYDFFYNDDRTGSRITGPPAALFSPDRSQVSGDSGIRAWIQSGLSPKKI 254
I LD+ N+M YD ++ T AALF +
Sbjct: 200 IVAPLDYINLMTYDLAGPWEKV----TNHQAALFGD----------------AAGPTFYN 239
Query: 255 VLGFPFFGHSLQLANANNHGFWAPTSGVVNGGTMSYKEIRQFIMSTNATKVFNATVVSDY 314
L G S + F +P S V+ + +
Sbjct: 240 ALREANLGWSWEELTR---AFPSPFSLTVDAAVQQHLMME-----------------GVP 279
Query: 315 CYSGTTWIGYDDTQSVNTKVKYAKDNGLLGYFAWQISQDD 354
+ +DD +S K KY K L G W + QD+
Sbjct: 280 SAKIVMGVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDN 319
|
| >d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
| >d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
| >d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 | Back information, alignment and structure |
|---|
| >d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 | Back information, alignment and structure |
|---|
| >d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 | Back information, alignment and structure |
|---|
| >d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 | Back information, alignment and structure |
|---|
| >d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333 | Back information, alignment and structure |
|---|
| >d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 | Back information, alignment and structure |
|---|
| >d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 | Back information, alignment and structure |
|---|
| >d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327 | Back information, alignment and structure |
|---|
| >d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327 | Back information, alignment and structure |
|---|
| >d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 330 | Back information, alignment and structure |
|---|
| >d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Length = 289 | Back information, alignment and structure |
|---|
| >d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 | Back information, alignment and structure |
|---|
| >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 | Back information, alignment and structure |
|---|
| >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 | Back information, alignment and structure |
|---|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Length = 265 | Back information, alignment and structure |
|---|
| >d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Length = 285 | Back information, alignment and structure |
|---|
| >d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 273 | Back information, alignment and structure |
|---|
| >d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 70 | Back information, alignment and structure |
|---|
| >d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 274 | Back information, alignment and structure |
|---|
| >d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Length = 282 | Back information, alignment and structure |
|---|
| >d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 68 | Back information, alignment and structure |
|---|
| >d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 68 | Back information, alignment and structure |
|---|
| >d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Length = 283 | Back information, alignment and structure |
|---|
| >d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 72 | Back information, alignment and structure |
|---|
| >d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 61 | Back information, alignment and structure |
|---|
| >d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Length = 73 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| d2pi6a1 | 292 | Signal processing protein (SPC-40, MGP-40) {Sheep | 100.0 | |
| d1itxa1 | 347 | Chitinase A1 {Bacillus circulans [TaxId: 1397]} | 100.0 | |
| d1wb0a1 | 297 | Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1w9pa1 | 333 | Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | 100.0 | |
| d1kfwa1 | 374 | Psychrophilic chitinase B {Arthrobacter sp., tad20 | 100.0 | |
| d1vf8a1 | 302 | Chitinase-like lectin ym1, saccharide binding doma | 100.0 | |
| d1edqa2 | 358 | Chitinase A, catalytic domain {Serratia marcescens | 100.0 | |
| d1ll7a1 | 330 | Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: | 100.0 | |
| d1jnda1 | 327 | Imaginal disc growth factor-2 {Fruit fly (Drosophi | 100.0 | |
| d1goia2 | 356 | Chitinase B, catalytic domain {Serratia marcescens | 100.0 | |
| d1nara_ | 289 | Seed storage protein {Vicia narbonensis, Narbonin | 100.0 | |
| d2hvma_ | 273 | Hevamine A (chitinase/lysozyme) {Para rubber tree | 99.97 | |
| d1edta_ | 265 | Endo-beta-N-acetylglucosaminidase {Streptomyces pl | 99.95 | |
| d2ebna_ | 285 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 99.95 | |
| d1ta3a_ | 274 | Xylanase inhibitor protein I, XIP-I {Wheat (Tritic | 99.94 | |
| d1cnva_ | 283 | Seed storage protein {Jack bean (Canavalia ensifor | 99.93 | |
| d1eoka_ | 282 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 99.79 | |
| d1vf8a2 | 70 | Chitinase-like lectin ym1 {Mouse (Mus musculus) [T | 99.45 | |
| d1wb0a2 | 68 | Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 | 99.29 | |
| d2pi6a2 | 68 | Signal processing protein (SPC-40, MGP-40) {Sheep | 99.24 | |
| d1itxa2 | 72 | Chitinase A1 {Bacillus circulans [TaxId: 1397]} | 99.0 | |
| d1edqa3 | 73 | Chitinase A {Serratia marcescens [TaxId: 615]} | 98.8 | |
| d1kfwa2 | 61 | Psychrophilic chitinase B {Arthrobacter sp., tad20 | 98.73 | |
| d1jnda2 | 92 | Imaginal disc growth factor-2 {Fruit fly (Drosophi | 98.63 | |
| d1w9pa2 | 62 | Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | 97.94 | |
| d1ll7a2 | 62 | Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: | 97.93 | |
| d1goia3 | 88 | Chitinase B {Serratia marcescens [TaxId: 615]} | 97.78 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 89.06 | |
| d2aama1 | 285 | Hypothetical protein TM1410 {Thermotoga maritima [ | 86.52 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 85.24 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 84.5 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 83.73 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 82.26 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 80.18 |
| >d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Signal processing protein (SPC-40, MGP-40) species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.8e-56 Score=407.61 Aligned_cols=256 Identities=30% Similarity=0.512 Sum_probs=223.5
Q ss_pred EEEEEeCCC-------CCCCCCCCCCCCCcEEEEEEEEeeCCCcEEEeCCc-chHHHHHHHHHHHhhCCCceEEEEEcCC
Q 037639 28 VKAAYWFSG-------SNFPVADIDSILFTHLFCAFADLDSQNFQVTVSSE-NQAIFSSFTRTVQQKNPAVKALLSIGGG 99 (361)
Q Consensus 28 ~~~~y~~~~-------~~~~~~~~~~~~~thii~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~lk~~~~~~kvllsigg~ 99 (361)
+++|||+.+ ..+.++++|.++||||+|+|+.+++++ ...... +...+.++ ..+|+++|++|+|+|||||
T Consensus 2 kvv~Yy~~w~~~r~~~~~~~~~~i~~~~~THiiyafa~i~~~~--~~~~~~~~~~~~~~~-~~lk~~~~~lKvllSvGG~ 78 (292)
T d2pi6a1 2 KLICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYTFANISNNE--IDTWEWNDVTLYDTL-NTLKNRNPKLKTLLSVGGW 78 (292)
T ss_dssp EEEEEEEGGGGGSSGGGCCCGGGSCTTTCSEEEEEEEEEETTE--EECCSTTHHHHHHHH-HHHHHHCTTCEEEEEEETT
T ss_pred eEEEEEccccccCCCCCCCChhHCCcccCCEEEEEEEEecCCC--ceecccccHHHHHHH-HHHHhhCCCceEEEEEecc
Confidence 689999842 346899999999999999999999654 333333 34445554 4799999999999999999
Q ss_pred CCCchhHHHHhcCHHHHHHHHHHHHHHHHcCCCcEEEeeecCCCccchhhHHHHHHHHHHHHHHHHHhcCCCceEEEEEe
Q 037639 100 NASKESFAAMASQAASRKSFIDSSINLARSLNFHGLDIDWEYPDNAQMSDFGTLLTEWRSAVAAEARSSGKPALLLTAAV 179 (361)
Q Consensus 100 ~~~~~~~~~~~~~~~~r~~f~~~l~~~l~~~~~DGidiD~e~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~ls~a~ 179 (361)
+.+++.|+.++++++.|++|++++++++++|+|||||||||+|...++.+|+.|++++|.+|.+.++..++ .+++++++
T Consensus 79 ~~~~~~fs~~~~~~~~r~~fi~si~~~l~~~~fDGiDiDwE~p~~~~~~~~~~l~~~lr~~l~~~~~~~~~-~~~~s~~~ 157 (292)
T d2pi6a1 79 NFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTTLVKEMKAEFIREAQAGTE-QLLLSAAV 157 (292)
T ss_dssp TSCHHHHHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCGGGHHHHHHHHHHHHHHHHHHHTTSSC-CCEEEEEE
T ss_pred ccCchHHHHHhccHHHHHHHHHHHHHHHHhcCCCeEEEeccccccccccccchhHHHHHHHHHHHHhccCC-Ccceeccc
Confidence 87677899999999999999999999999999999999999999999999999999999999988765443 37899988
Q ss_pred ecccccccCCCChhhHhccCCeEEeeeeccCCCCCCCCCCCCCCCCCCCCCCC----CCCcHHHHHHHHHHcCCCCCceE
Q 037639 180 SYSANYFGAINPTSAISNSLDWTNVMAYDFFYNDDRTGSRITGPPAALFSPDR----SQVSGDSGIRAWIQSGLSPKKIV 255 (361)
Q Consensus 180 ~~~~~~~~~~~~~~~l~~~vD~v~lm~yd~~~~~~~~~~~~~~~~spl~~~~~----~~~~~~~~~~~~~~~g~~~~Kiv 255 (361)
++.+......|+++++.+++|+|++|+||++ ++ | ...++++||||.... ...+++.+|++|++.|+|++||+
T Consensus 158 ~~~~~~~~~~~~~~~l~~~vD~invMtYD~~-g~-~--~~~~g~~apL~~~~~~~~~~~~~v~~~v~~~~~~Gvp~~Klv 233 (292)
T d2pi6a1 158 SAGKIAIDRGYDIAQISRHLDFISLLTYDFH-GA-W--RQTVGHHSPLFRGNEDASSRFSNADYAVSYMLRLGAPANKLV 233 (292)
T ss_dssp ECCHHHHHHHCCHHHHHHHCSEEEEETTCCS-CT-T--CCBCCCSSCSSCCSSSCSCTTSSHHHHHHHHHHTTCCGGGEE
T ss_pred CchhhHHhccccHHHHHhhCCEEEEeccccc-CC-C--CCccccCCCCCCCCcccCcCCccHHHHHHHHHHCCCCHHHeE
Confidence 8776655567899999999999999999999 99 8 888999999985432 34689999999999999999999
Q ss_pred EecccccccccccCCCCCCCCCCCccCCCCcccchHHHHHHhhcCCcEEEEecceeeEEEEeCCEEEEECCHHHHHHHHH
Q 037639 256 LGFPFFGHSLQLANANNHGFWAPTSGVVNGGTMSYKEIRQFIMSTNATKVFNATVVSDYCYSGTTWIGYDDTQSVNTKVK 335 (361)
Q Consensus 256 lGlp~yG~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~i~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y~d~~S~~~K~~ 335 (361)
|||| |||++|++.|++
T Consensus 234 lGip----------------------------------------------------------------ydd~~Si~~K~~ 249 (292)
T d2pi6a1 234 MGIP----------------------------------------------------------------TDDQESVKNKAR 249 (292)
T ss_dssp EEEE----------------------------------------------------------------SCCHHHHHHHHH
T ss_pred EEec----------------------------------------------------------------CCCHHHHHHHHH
Confidence 9976 589999999999
Q ss_pred HHHHcCCceEEEeeecCCCC
Q 037639 336 YAKDNGLLGYFAWQISQDDN 355 (361)
Q Consensus 336 ~~~~~gl~Gv~iW~l~~Dd~ 355 (361)
|++++||||+|+|++++||.
T Consensus 250 ~~~~~~lgGv~iW~l~~DD~ 269 (292)
T d2pi6a1 250 YLKNRQLAGAMVWALDLDDF 269 (292)
T ss_dssp HHHHTTCSEEEEECGGGSCS
T ss_pred HHHHCCCceEEEEecccccC
Confidence 99999999999999999984
|
| >d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
| >d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | Back information, alignment and structure |
|---|
| >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} | Back information, alignment and structure |
|---|
| >d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} | Back information, alignment and structure |
|---|
| >d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} | Back information, alignment and structure |
|---|
| >d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} | Back information, alignment and structure |
|---|
| >d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} | Back information, alignment and structure |
|---|
| >d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} | Back information, alignment and structure |
|---|
| >d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} | Back information, alignment and structure |
|---|
| >d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} | Back information, alignment and structure |
|---|
| >d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
| >d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
| >d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} | Back information, alignment and structure |
|---|
| >d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | Back information, alignment and structure |
|---|
| >d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} | Back information, alignment and structure |
|---|
| >d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|