Citrus Sinensis ID: 037666

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-----
Protein Sequence
AVAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAAAITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYLIRK
Secondary Structure (PSIPRED)
cHHHHHHHHcHHHHHcccccccccHHHHHHHcccHHHHHHHHHHcccHHHccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccccccHHHHHHHHHccHHHHHHHHHcccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHccHHHHHHHccccccHHHHHHHcccHHHHHHHHHHccHHHHHHHccccccHHHHHHHcccHHHHHHHHHHccHHHcccccccccHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHccccHHHHHHHHccHHHHHHHHccccccccHHHHHHcccccHHHHHHHcHHHcccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHccccHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcc
Coil and Loop (DISEMBL)
AVAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKgnkdiamvpggdgtLPIVRAAALGQRQTVVLLYEKtkgsltddECIELLVKLIETDLYAVALRLLkdrpqlatkrdrneETALHVLARKnltssnqnpcgvenvvPKKLAEAintggltptalfSEKHKELKRKgetwmkdtASSCMIVATLIATIVFAAaitvpggnkedtglpffrqkasfKIFAVSNVISLVASSVSIVNFLSIvapryaeedFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYLIRK
Flexible Loop (DISEMBL)
AVAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYektkgsltddECIELLVKLIETDLYAVALRLLkdrpqlatkrdrneetALHVLarknltssnqnpcgVENVVPKKLAEAINtggltptalfsekHKELKRKGETWMKDTASSCMIVATLIATIVFAAAITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYLIRK
Low Complexity Region (SEG)
AVAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMivatliativfaaaitvPGGNKEDTGLPFFRQKASFKIFavsnvislvassvsivnFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYLIRK
Disordered region (IsUnstruct)
*****IYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKD********************************GVENVVPKKLAEAINTGGLTPTALF***********ETWMKDTASSCMIVATLIATIVFAAAITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYLI**
Disordered Region (DISOPRED)
AVAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAAAITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYLIRK
Disordered Region (DISEMBL)
AVAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAAAITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYLIRK
Disordered Region (DISPRO)
AVAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAAAITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYLI**
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
AVAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAAAITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYLIRK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	375	2.2.26 [Sep-21-2011]
Q9C7A2	590	Ankyrin repeat-containing	no	no	0.858	0.545	0.266	5e-15
Q71S22	1007	Inversin-A OS=Xenopus lae	N/A	no	0.133	0.049	0.5	0.0002
Q8C8R3	3898	Ankyrin-2 OS=Mus musculus	yes	no	0.445	0.042	0.300	0.0002
Q9ZU96	532	Ankyrin repeat-containing	no	no	0.432	0.304	0.247	0.0006

>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 172/428 (40%), Gaps = 106/428 (24%)

Query: 14  IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIV 73
           I  E+  LG TAL  AA    +D VKELLK  S E +AKKN+ G      AA  G   IV
Sbjct: 121 IVNEVNELGETALFTAADKGHLDVVKELLKYSSRESIAKKNRSGYDPLHIAAIQGHHAIV 180

Query: 74  E-----------------------EAMKGNKDI--AMVPGGDGTLPIVR-----AAALGQ 103
           E                        AM+G+ ++   ++      L I R     A  L  
Sbjct: 181 EVLLDHDATLSQTFGPSNATPLVSAAMRGHTEVVNQLLSKAGNLLEISRSNNKNALHLAA 240

Query: 104 RQTVVLLYEKTKGSLTDD-ECIELLVKLIETDLY--------AVALRLLKDRPQLATKRD 154
           RQ  V   E  K  L+ D +    + K  +T L+         V   LL   P +  + D
Sbjct: 241 RQGHV---EVIKALLSKDPQLARRIDKKGQTALHMAVKGQSSEVVKLLLDADPAIVMQPD 297

Query: 155 RNEETALHVLARK----------NLTSSNQNPCGVENVVPKKLAEAI------------- 191
           ++  TALHV  RK          +L  +N N    ++     +AE +             
Sbjct: 298 KSCNTALHVATRKKRAEIVELLLSLPDTNANTLTRDHKTALDIAEGLPLSEESSYIKECL 357

Query: 192 -NTGGL--------------TPTALFSEKH-----------------KELKRKGETWMKD 219
             +G L              T T + ++ H                 KEL++     + +
Sbjct: 358 ARSGALRANELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKELRKLHREGINN 417

Query: 220 TASSCMIVATLIATIVFAAAITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVAS-SVS 278
             +S  +VA L AT+ FAA  TVPGG+  D G      +ASFKIF + N ++L  S +V 
Sbjct: 418 ATNSVTVVAVLFATVAFAAIFTVPGGDNND-GSAVVVGRASFKIFFIFNALALFTSLAVV 476

Query: 279 IVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAI 338
           +V    +     AE+  + ++ +  L+  A++  ++A     F A+SYIV    + W A 
Sbjct: 477 VVQITLVRGETKAEKRVVEVINK--LMWLASMCTSVA-----FLASSYIVVGRKNEWAAE 529

Query: 339 LAIVISSI 346
           L  V+  +
Sbjct: 530 LVTVVGGV 537

Arabidopsis thaliana (taxid: 3702)

>sp|Q71S22|INVSA_XENLA Inversin-A OS=Xenopus laevis GN=invs-a PE=1 SV=1

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIV 73
           G T LH AAQ NC D V+ LL  +S  D A  +  G TAF +AAG G  E+V
Sbjct: 285 GATPLHYAAQGNCPDTVRVLLSHISVRDEA--DLEGRTAFMWAAGKGSDEVV 334

Required for normal renal development and establishment of left-right axis. Probably acts as a molecular switch between different Wnt signaling pathways. Inhibits the canonical Wnt pathway by targeting cytoplasmic disheveled for degradation by the ubiquitin-proteasome. This suggests that it is required in renal development to oppose the repression of terminal differentiation of tubular epithelial cells by Wnt signaling (By similarity). Plays a central role in convergent extension movements in gastrulating embryos, a processus regulated by Wnt signaling.

Xenopus laevis (taxid: 8355)

>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/183 (30%), Positives = 79/183 (43%), Gaps = 16/183 (8%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81
           G  ALH+AA+   +  V+ELL   S+ D A K   G TA   A+ +G  E+V+  +K   
Sbjct: 64  GLNALHLAAKEGHVGLVQELLGRGSSVDSATKK--GNTALHIASLAGQAEVVKVLVKEGA 121

Query: 82  DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK--TKGSLTDDECIELLVKLIETDLYAVA 139
           +I      +G  P+  AA       V  L E    + + T+D    L V L +    AVA
Sbjct: 122 NIN-AQSQNGFTPLYMAAQENHIDVVKYLLENGANQSTATEDGFTPLAVALQQGHNQAVA 180

Query: 140 LRLLKDRPQLATKRDRNEETALHVLARKNLTSSN----QNPCGVENVVPKKLAEAINTGG 195
           + L  D       + +    ALH+ ARK+ T S     QN    + V  K +       G
Sbjct: 181 ILLEND------TKGKVRLPALHIAARKDDTKSAALLLQNDHNAD-VQSKMMVNRTTESG 233

Query: 196 LTP 198
            TP
Sbjct: 234 FTP 236

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes (By similarity). Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Mus musculus (taxid: 10090)

>sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=1 SV=1

 Score = 45.4 bits (106), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 12/174 (6%)

Query: 207 KELKRKGETWMKDTASSCMIVATLIATIVFAAAITVPGG---NKEDTGLPFFRQKASFKI 263
           KEL++     +++T +S  +VA L A+I F A   +PG         G      +  F++
Sbjct: 337 KELRKLHREAVQNTTNSITVVAVLFASIAFLAIFNLPGQYFTEGSHVGQANIAGRTGFRV 396

Query: 264 FAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSA 323
           F + N  SL  S   +V  +++VA     +  +  +  KL      ++ A A     F A
Sbjct: 397 FCLLNATSLFISLAVVVVQITLVAWDTRAQKKVVSVVNKL------MWAACACTFGAFLA 450

Query: 324 TSYIVFKDGSLWIAILAIVISSIPVIL--FVKQHFLFFYDVLRSTYASHYLIRK 375
            ++ V   G+ W+AI  I +   P+++       +  F    RS   S   IR+
Sbjct: 451 IAFAVVGKGNSWMAI-TITLLGAPILVGTLASMCYFVFRQRFRSGNDSQRRIRR 503

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
224120314	354	predicted protein [Populus trichocarpa]	0.522	0.553	0.510	5e-51
224120488	610	predicted protein [Populus trichocarpa]	0.514	0.316	0.515	8e-51
118488149	354	unknown [Populus trichocarpa]	0.522	0.553	0.520	8e-51
224120494	354	predicted protein [Populus trichocarpa]	0.522	0.553	0.515	3e-50
297737987	1855	unnamed protein product [Vitis vinifera]	0.512	0.103	0.494	6e-50
147784800	1697	hypothetical protein VITISV_029434 [Viti	0.52	0.114	0.494	8e-50
359472754	789	PREDICTED: ankyrin repeat-containing pro	0.52	0.247	0.494	1e-49
255565315	233	hypothetical protein RCOM_0892190 [Ricin	0.504	0.811	0.513	2e-48
225425076	563	PREDICTED: ankyrin repeat-containing pro	0.592	0.394	0.436	1e-47
449454915	652	PREDICTED: uncharacterized protein LOC10	0.464	0.266	0.508	2e-47

>gi|224120314|ref|XP_002331017.1| predicted protein [Populus trichocarpa] gi|222872947|gb|EEF10078.1| predicted protein [Populus trichocarpa]

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 100/196 (51%), Positives = 137/196 (69%)

Query: 179 VENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAA 238
           V+ VV  +  E  N  G TP ALF E+HK+L ++GE WM+DTA SCM+VATLIAT+VFAA
Sbjct: 143 VKKVVQPRHIEEKNIHGKTPGALFIEQHKDLMKEGEQWMRDTADSCMLVATLIATVVFAA 202

Query: 239 AITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHL 298
           A T+PGGN +D G P F +K +FK F +S+ ISLV S+ S++ FLSI   RYAE++FL  
Sbjct: 203 AFTLPGGNIQDKGTPVFLEKPAFKFFVISDAISLVTSASSLITFLSIRTSRYAEQNFLWS 262

Query: 299 LPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLF 358
           LP +L++G  TLF++I AMM  F A  ++VFKD     +I  +V++S+PVI F+ QH+  
Sbjct: 263 LPNRLIIGLTTLFISIGAMMGAFVAAFFLVFKDKLQQFSIPIVVVASLPVIFFIWQHYRL 322

Query: 359 FYDVLRSTYASHYLIR 374
           F D++ STY S  L +
Sbjct: 323 FLDMIHSTYTSRSLFK 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120488|ref|XP_002331060.1| predicted protein [Populus trichocarpa] gi|222872990|gb|EEF10121.1| predicted protein [Populus trichocarpa]

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 101/196 (51%), Positives = 138/196 (70%)

Query: 179 VENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAA 238
           V+ VV  +  E  N  G TP ALF E+H++L ++GE WM+DTA SCM+VATLIAT+VFAA
Sbjct: 399 VKKVVQPRHIEEKNFHGKTPGALFIEQHRDLMKEGEQWMRDTADSCMLVATLIATVVFAA 458

Query: 239 AITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHL 298
           A TVPGGN +D G P F ++ +FK FA+S+ ISLV S+ S++ FLS    RYAE++FL  
Sbjct: 459 AFTVPGGNFQDKGTPVFLKEIAFKFFAISDAISLVTSASSLLTFLSTRTSRYAEQNFLWS 518

Query: 299 LPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLF 358
           LP +L++G  TLF++I AMMV F AT ++VF +  L  +I   V++S+PVI F+ QHF  
Sbjct: 519 LPNRLIIGLTTLFISIGAMMVAFMATFFLVFGNKLLPYSIPIAVVASLPVIFFIWQHFRL 578

Query: 359 FYDVLRSTYASHYLIR 374
           F D++ STY S  L +
Sbjct: 579 FVDMIHSTYTSRSLFK 594

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488149|gb|ABK95894.1| unknown [Populus trichocarpa]

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 102/196 (52%), Positives = 139/196 (70%)

Query: 179 VENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAA 238
           V+ VV  +  E  N  G TP ALF E+H++L ++GE WM+DTA SCM+VATLIAT+VFAA
Sbjct: 143 VKKVVQPRHIEEKNFHGKTPGALFIEQHRDLMKEGEQWMRDTADSCMLVATLIATVVFAA 202

Query: 239 AITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHL 298
           A TVPGGN +D G P F ++ +FK FA+S+ ISLV S+ S++ FLSI   RYAE++FL  
Sbjct: 203 AFTVPGGNFQDKGTPVFLKEIAFKFFAISDAISLVTSASSLLTFLSIRTSRYAEQNFLWS 262

Query: 299 LPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLF 358
           LP +L++G  TLF++I AMMV F AT ++VF +  L  +I   V++S+PVI F+ QHF  
Sbjct: 263 LPNRLIIGLTTLFISIGAMMVAFMATFFLVFGNKLLPYSIPIAVVASLPVIFFIWQHFRL 322

Query: 359 FYDVLRSTYASHYLIR 374
           F D++ STY S  L +
Sbjct: 323 FVDMIHSTYTSRSLFK 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120494|ref|XP_002331061.1| predicted protein [Populus trichocarpa] gi|222872991|gb|EEF10122.1| predicted protein [Populus trichocarpa]

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 101/196 (51%), Positives = 138/196 (70%)

Query: 179 VENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAA 238
           V+ VV  +  E  N  G TP ALF E+H++L ++GE WM+DTA SCM+VATLIAT+VFAA
Sbjct: 143 VKKVVQPRHIEEKNFHGKTPGALFIEQHRDLMKEGEQWMRDTADSCMLVATLIATVVFAA 202

Query: 239 AITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHL 298
           A TVPGGN +D G P F ++ +FK FA+S+ ISLV S+ S++ FLS    RYAE++FL  
Sbjct: 203 AFTVPGGNFQDKGTPVFLKEIAFKFFAISDAISLVTSASSLLTFLSTRTSRYAEQNFLWS 262

Query: 299 LPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLF 358
           LP +L++G  TLF++I AMMV F AT ++VF +  L  +I   V++S+PVI F+ QHF  
Sbjct: 263 LPNRLIIGLTTLFISIGAMMVAFMATFFLVFGNKLLPYSIPIAVVASLPVIFFIWQHFRL 322

Query: 359 FYDVLRSTYASHYLIR 374
           F D++ STY S  L +
Sbjct: 323 FVDMIHSTYTSRSLFK 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737987|emb|CBI27188.3| unnamed protein product [Vitis vinifera]

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 97/196 (49%), Positives = 134/196 (68%)

Query: 179 VENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAA 238
           VE ++     E  N  G TP  LF+E+HK+L R+GE WMKDTASSCM+VATLIAT++FAA
Sbjct: 499 VEKIIQPSYTEMKNEQGRTPQILFTEEHKDLVREGEKWMKDTASSCMVVATLIATVMFAA 558

Query: 239 AITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHL 298
           A +VPGGN +DTG P F  K SF +FA+S+ ++L +S+ SI+ FLSI+  RYAEEDFL  
Sbjct: 559 AFSVPGGNDDDTGRPIFLTKKSFLVFAISDALALFSSATSILIFLSILTSRYAEEDFLES 618

Query: 299 LPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLF 358
           LP +L++G ATLF+++A MM+ F AT +IV     +W+A    +++ +PV LF    F  
Sbjct: 619 LPNRLIIGLATLFISVATMMIAFCATLFIVLGPELVWVANPMALVACVPVTLFPLLKFPL 678

Query: 359 FYDVLRSTYASHYLIR 374
           F D++   Y S  + R
Sbjct: 679 FIDMISHRYRSSIIFR 694

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147784800|emb|CAN68568.1| hypothetical protein VITISV_029434 [Vitis vinifera]

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 97/196 (49%), Positives = 134/196 (68%)

Query: 179 VENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAA 238
           VE ++     E  N  G TP  LF+E+HK+L R+GE WMKDTASSCM+VATLIAT++FAA
Sbjct: 564 VEKIIQPSYTEMKNEQGRTPQILFTEEHKDLVREGEKWMKDTASSCMVVATLIATVMFAA 623

Query: 239 AITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHL 298
           A +VPGGN +DTG P F  K SF +FA+S+ ++L +S+ SI+ FLSI+  RYAEEDFL  
Sbjct: 624 AFSVPGGNDDDTGRPIFLTKKSFLVFAISDALALFSSATSILIFLSILTSRYAEEDFLES 683

Query: 299 LPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLF 358
           LP +L++G ATLF+++A MM+ F AT +IV     +W+A    +++ +PV LF    F  
Sbjct: 684 LPNRLIIGLATLFISVATMMIAFCATLFIVLGPELVWVANPMALVACVPVTLFPLLKFPL 743

Query: 359 FYDVLRSTYASHYLIR 374
           F D++   Y S  + R
Sbjct: 744 FIDMISHRYRSSIIFR 759

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472754|ref|XP_002276402.2| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 97/196 (49%), Positives = 134/196 (68%)

Query: 179 VENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAA 238
           VE ++     E  N  G TP  LF+E+HK+L R+GE WMKDTASSCM+VATLIAT++FAA
Sbjct: 525 VEKIIQPSYTEMKNEQGRTPQILFTEEHKDLVREGEKWMKDTASSCMVVATLIATVMFAA 584

Query: 239 AITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHL 298
           A +VPGGN +DTG P F  K SF +FA+S+ ++L +S+ SI+ FLSI+  RYAEEDFL  
Sbjct: 585 AFSVPGGNDDDTGRPIFLTKKSFLVFAISDALALFSSATSILIFLSILTSRYAEEDFLES 644

Query: 299 LPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLF 358
           LP +L++G ATLF+++A MM+ F AT +IV     +W+A    +++ +PV LF    F  
Sbjct: 645 LPNRLIIGLATLFISVATMMIAFCATLFIVLGPELVWVANPMALVACVPVTLFPLLKFPL 704

Query: 359 FYDVLRSTYASHYLIR 374
           F D++   Y S  + R
Sbjct: 705 FIDMISHRYRSSIIFR 720

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565315|ref|XP_002523649.1| hypothetical protein RCOM_0892190 [Ricinus communis] gi|223537101|gb|EEF38735.1| hypothetical protein RCOM_0892190 [Ricinus communis]

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 97/189 (51%), Positives = 129/189 (68%)

Query: 179 VENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAA 238
           VE +V     E  N  G TP  LFS +HK+LKR+GE WMK+TASSCM+VATLIAT++FAA
Sbjct: 34  VEKIVQPLYTEMKNFDGQTPECLFSIEHKKLKREGEKWMKETASSCMLVATLIATVMFAA 93

Query: 239 AITVPGGNKEDTGLPFFRQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHL 298
           A TVPGG  E++G P F    SF  F +S+ ++L +S+ SI+ FLSI+  RYAEEDFLH 
Sbjct: 94  AFTVPGGTNENSGRPIFLHTRSFMAFVISDALALFSSATSILIFLSILTSRYAEEDFLHS 153

Query: 299 LPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLF 358
           LP KL++G ATLF++I  MMV F+AT ++V + G  W  +  I+++ IPV LF    F  
Sbjct: 154 LPNKLIMGLATLFISITTMMVAFTATLFLVLRHGLEWTTLPIIIVACIPVSLFASLQFPL 213

Query: 359 FYDVLRSTY 367
             D++  TY
Sbjct: 214 VVDIVSHTY 222

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425076|ref|XP_002271486.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/236 (43%), Positives = 140/236 (59%), Gaps = 14/236 (5%)

Query: 153 RDRNEETALHVLARKNLTSSNQNPCG--------------VENVVPKKLAEAINTGGLTP 198
           +D N+   LH+  RK          G              VE ++     E  N  G TP
Sbjct: 321 KDDNDNNMLHLAGRKAPLPQRNIVSGAALQMQRELLWFKEVEKIMLPTYRERKNKDGKTP 380

Query: 199 TALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAAAITVPGGNKEDTGLPFFRQK 258
             LF+++HK L + GE WM+ TA+  M+VATLIAT+VFAAA TVPGG+ +DTG+P   +K
Sbjct: 381 RDLFTKEHKNLMKDGEKWMRGTAAQSMLVATLIATVVFAAAFTVPGGSNQDTGIPILLRK 440

Query: 259 ASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMM 318
            SF IFAVS+ I+L +SS SI+ FLSI+  RYAE+DFL  LP +L+ G  TLFV+I +MM
Sbjct: 441 KSFMIFAVSDAIALFSSSTSILVFLSILTSRYAEDDFLESLPSRLMFGLITLFVSIISMM 500

Query: 319 VVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYLIR 374
           V F+ T ++VF  G  W  +L  V + +PV L+    +    D+ RSTY S +L R
Sbjct: 501 VTFTITFFLVFGHGFAWAPMLIAVSACVPVTLYFSLQYPLLADIFRSTYGSRFLFR 556

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454915|ref|XP_004145199.1| PREDICTED: uncharacterized protein LOC101215460 [Cucumis sativus]

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 90/177 (50%), Positives = 128/177 (72%)

Query: 196 LTPTALFSEKHKELKRKGETWMKDTASSCMIVATLIATIVFAAAITVPGGNKEDTGLPFF 255
           LTP  LF+EKHK L+++GE WMK+TA+SCM+VATLI+T+VFAAA TVPGGN ++TG P F
Sbjct: 466 LTPRQLFTEKHKRLRKEGEEWMKNTANSCMLVATLISTVVFAAAFTVPGGNDDNTGTPIF 525

Query: 256 RQKASFKIFAVSNVISLVASSVSIVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIA 315
           + K  F +F VS+ I+L +SS SI+ FLSI+  RYAEEDFLH LP KLL G A+LF++I 
Sbjct: 526 QNKFWFAMFVVSDAIALFSSSTSILMFLSILTSRYAEEDFLHSLPSKLLFGLASLFISIV 585

Query: 316 AMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYL 372
            M V FS+T ++++ + ++ I  +   ++ IP+  F    F  + D+  +TY+S +L
Sbjct: 586 FMAVAFSSTFFLIYHNANISIPTMVTAMAIIPITCFCLLQFTLWIDIFHNTYSSRFL 642

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
TAIR|locus:2175413	669	AT5G04700 "AT5G04700" [Arabido	0.501	0.281	0.324	6.2e-36
TAIR|locus:2180228	625	AT5G04690 "AT5G04690" [Arabido	0.845	0.507	0.302	3.1e-28
TAIR|locus:2080240	574	AT3G54070 "AT3G54070" [Arabido	0.786	0.513	0.291	1e-27
TAIR|locus:2165174	347	AT5G35810 "AT5G35810" [Arabido	0.517	0.559	0.316	5.2e-26
TAIR|locus:2175448	603	AT5G04730 "AT5G04730" [Arabido	0.52	0.323	0.270	1.1e-19
TAIR|locus:2165194	282	AT5G35830 [Arabidopsis thalian	0.328	0.436	0.395	4e-17
TAIR|locus:2092522	590	ITN1 "INCREASED TOLERANCE TO N	0.4	0.254	0.329	3.2e-13
TAIR|locus:2075009	607	AT3G09550 [Arabidopsis thalian	0.429	0.265	0.298	5.6e-08
TAIR|locus:2157553	598	AT5G54710 "AT5G54710" [Arabido	0.362	0.227	0.298	1.1e-05
TAIR|locus:2026489	543	AT1G07710 "AT1G07710" [Arabido	0.416	0.287	0.248	1.8e-05

TAIR|locus:2175413 AT5G04700 "AT5G04700" [Arabidopsis thaliana (taxid:3702)]

 Score = 288 (106.4 bits), Expect = 6.2e-36, Sum P(2) = 6.2e-36
 Identities = 62/191 (32%), Positives = 98/191 (51%)

Query:   179 VENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMXXXXXXXXXXXXX 238
             VE + P+   E +NT   TP  +F+++H+ L+++ E WMKDTA SC              
Sbjct:   467 VERIAPEIEKERVNTEEQTPIEIFTKEHQGLRQEAEKWMKDTAMSCSLVAALIVTVTFAA 526

Query:   239 XXXXPGGNKEDT-GLPFFRQKASFKIFXXXXXXXXXXXXXXXXXFLSIVAPRYAEEDFLH 297
                 PGG  +++ G PF  +   F IF                 FL I+  RY+ +DFL 
Sbjct:   527 VFTVPGGTDDNSKGKPFHLRDRRFIIFIVSDLISCFASCTSVLIFLGILTARYSFDDFLV 586

Query:   298 LLPRKLLVGFATLFVAIAAMMVVFSATSYIVF-KDGSLWIAILAIVISSIPVILFVKQHF 356
              LP K++ G + LFV+IAAM++ FS+  + +  K+G  WI    I+ + +P +LFV   +
Sbjct:   587 FLPTKMIAGLSILFVSIAAMLIAFSSALFTMMGKEGK-WIVAPTILFACLPALLFVLLQY 645

Query:   357 LFFYDVLRSTY 367
                 +++ STY
Sbjct:   646 PLLKEMIFSTY 656

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180228 AT5G04690 "AT5G04690" [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 103/341 (30%), Positives = 155/341 (45%)

Query:    39 KELLKMMSTEDLA----KKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLP 94
             K+LLK +S E LA    ++++    A  +A   G V+ + E +K N ++ +   G  TL 
Sbjct:   298 KKLLKGISEETLALGLKERSESVDEALLFAVRYGNVDFLVEMIKNNSEL-LWSTGTSTL- 355

Query:    95 IVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRD 154
                A  + Q +   LLY      L D + + L  K  ++D  +V L L    P       
Sbjct:   356 FNTAVQVRQEKVFSLLY-----GLGDRKYLFLADK--DSDGNSV-LHLAGYPPP------ 401

Query:   155 RNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGE 214
              N + A  V A   +    Q    +E +VP    E +NT  LTP  +F ++H+ ++ + E
Sbjct:   402 -NYKLATVVSATLQMQRELQWFKEMERIVPAIENERVNTENLTPIEIFRKEHEAMRLEAE 460

Query:   215 TWMKDTASSCMXXXXXXXXXXXXXXXXXPGGNKEDTG-LPFFRQKASFKIFXXXXXXXXX 273
              WMKDTA SC                  PGG  +++G  PF R +  F IF         
Sbjct:   461 KWMKDTAMSCSLVAALIVTVTFAAIFTVPGGTDDNSGGRPFHRHERIFVIFIVSDLISCF 520

Query:   274 XXXXXXXXFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGS 333
                     FL I+  RYA +DFL  LP  ++ G +TLFV+IAAM+V FS+  + +F D  
Sbjct:   521 AACTSVLIFLGILTARYAFDDFLFSLPANMIAGLSTLFVSIAAMLVAFSSALFTIFNDP- 579

Query:   334 LWIAILAIVISSIPVILFVKQHFLFFYDVLRSTYASHYLIR 374
              WI    I  +  P +LFV   +    +++ STY      R
Sbjct:   580 -WIVAPTIFFACFPALLFVMIQYPLLKELIFSTYGKRIFDR 619

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2080240 AT3G54070 "AT3G54070" [Arabidopsis thaliana (taxid:3702)]

 Score = 316 (116.3 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 93/319 (29%), Positives = 152/319 (47%)

Query:    62 FYAAGSGMVEIVEEAMKGNKDIA-MVPGGDGTLPIVRAAALGQRQTVV-LLYEKTKGSLT 119
             F AA  G VEI+   ++ + D+  +V   + TL     AAL + + +  L+YE   G + 
Sbjct:   260 FDAAELGNVEILVILIRSHLDLLWIVDNNNRTL--FHVAALYRHENIFSLIYEL--GGIK 315

Query:   120 DDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGV 179
             D     L+    E       L L+   P +  ++      ALH+  +K L         V
Sbjct:   316 D-----LIASYKEKQSKDTLLHLVARLPPM-NRQQVGSGAALHM--QKELLWFK----AV 363

Query:   180 ENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMXXXXXXXXXXXXXX 239
             + +VP+   E  NT G     +F+E+H+ L+++GE WMK+TA++CM              
Sbjct:   364 KEIVPRSYIETKNTKGELAHDIFTEQHENLRKEGERWMKETATACMLGATLIATVVFAAA 423

Query:   240 XXXPGGN-----KEDT-GLPFFRQKASFKIFXXXXXXXXXXXXXXXXXFLSIVAPRYAEE 293
                PGGN     K +T G P FR++  F IF                 FLSI   RYAEE
Sbjct:   424 ITIPGGNDDSGDKANTLGFPNFRKRLLFDIFTLSDSVALFSSMMSIVIFLSIFTSRYAEE 483

Query:   294 DFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVK 353
             DF + LP KL+ G + LF++I +M++ F+ +  ++  + +    +L   ++S+  + F  
Sbjct:   484 DFRYDLPTKLMFGLSALFISIISMILAFTFSMILIRVEKASLSLVLISCLASLTALTFAY 543

Query:   354 QHFLFFYDVLRSTYASHYL 372
              +F  +++ LRS Y S +L
Sbjct:   544 LYFHLWFNTLRSVYISMFL 562

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2165174 AT5G35810 "AT5G35810" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 63/199 (31%), Positives = 99/199 (49%)

Query:   179 VENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMXXXXXXXXXXXXX 238
             V+ +VP+   +  N        LF+++H  L+++GE WMK+TA++C+             
Sbjct:   139 VKEIVPRVYIKTKNKKEEVAHDLFTKEHDNLRKEGEKWMKETATACILVSTLIATVVFAA 198

Query:   239 XXXXPGGNK-----EDTGLPFFRQKASFKIFXXXXXXXXXXXXXXXXXFLSIVAPRYAEE 293
                 PGGN      +  G P FR++  F++F                 FLSI+  RYAE 
Sbjct:   199 AFTLPGGNDTSGDIKTLGFPTFRKEFWFEVFIISDSVALLSSVTSIMIFLSILTSRYAEA 258

Query:   294 DFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVK 353
              F   LP KL++G   LFV+I +M++ F+AT  ++      W  IL + ++S   + FV 
Sbjct:   259 SFQTTLPTKLMLGLLALFVSIISMVLAFTATLILIRDQEPKWSLILLVYVASATALSFVV 318

Query:   354 QHFLFFYDVLRSTYASHYL 372
              HF  ++D LRS Y S +L
Sbjct:   319 LHFQLWFDTLRSAYLSKFL 337

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2175448 AT5G04730 "AT5G04730" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
 Identities = 53/196 (27%), Positives = 89/196 (45%)

Query:   179 VENVVPKKLAEAINTGGLTPTALFSEKHKELKRKGETWMKDTASSCMXXXXXXXXXXXXX 238
             VE++V ++     N    TP  +F   H+ L+++GE WMK TA++C              
Sbjct:   402 VESLVSEREVVQKNKDNKTPRQIFEHYHEHLRKEGEEWMKYTATACSFVAALIATVTFQA 461

Query:   239 XXXXPGGNKEDTGLPFFRQKASFKIFXXXXXXXXXXXXXXXXXFLSIVAPRYAEEDFLHL 298
                 PGG    +G P       F+ F                 FLSI+  RY+ +DF+  
Sbjct:   462 IFTVPGGIDGTSGSPLILNDLHFRAFIFTDTLAFFASCISVLIFLSILTSRYSFDDFIVS 521

Query:   299 LPRKLLVGFATLFVAIAAMMVVFSATSYIVFKDGSLWIAILAIVISSIPVILFVKQHFLF 358
             LPRK+++G + LF++IA+M+V F  +     +     +  L   ++S P +LF+   +  
Sbjct:   522 LPRKMILGQSILFISIASMLVAFITSLSASMRHKPALVYPLK-PLASFPSLLFLMLQYPL 580

Query:   359 FYDVLRSTYASHYLIR 374
               +++ STY      R
Sbjct:   581 LKEMISSTYGKRLFYR 596

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2165194 AT5G35830 [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 4.0e-17, P = 4.0e-17
 Identities = 49/124 (39%), Positives = 70/124 (56%)

Query:    14 IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIV 73
             I Q+IT+   T LH+A  A    FV+ LL  + + DLA +N  G TA  +AA SG+VEI 
Sbjct:   114 IYQKITSKSETVLHIAVAAKHEGFVRNLLGSLESNDLALRNVDGNTALCFAAASGVVEIA 173

Query:    74 EEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIE 132
             +  ++ NKD+ M+ GG  T PI  AA  G  + V  LY+ T+     D+E + L   +I 
Sbjct:   174 KMLIEKNKDLPMIRGGGKTTPIHMAALFGHGEMVKYLYKNTRFREFNDEEFVNLFHAVIS 233

Query:   133 TDLY 136
              D+Y
Sbjct:   234 ADIY 237

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2092522 ITN1 "INCREASED TOLERANCE TO NACL" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
 Identities = 52/158 (32%), Positives = 73/158 (46%)

Query:    14 IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIV 73
             I  E+  LG TAL  AA    +D VKELLK  S E +AKKN+ G      AA  G   IV
Sbjct:   121 IVNEVNELGETALFTAADKGHLDVVKELLKYSSRESIAKKNRSGYDPLHIAAIQGHHAIV 180

Query:    74 EEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSL-----TDDECIELLV 128
             E  +  +  ++   G     P+V AA  G  + V  L  K    L      +   + L  
Sbjct:   181 EVLLDHDATLSQTFGPSNATPLVSAAMRGHTEVVNQLLSKAGNLLEISRSNNKNALHLAA 240

Query:   129 KLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLAR 166
             +  +  +  +   L KD PQLA + D+  +TALH+  +
Sbjct:   241 R--QGHVEVIKALLSKD-PQLARRIDKKGQTALHMAVK 275

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IDA

TAIR|locus:2075009 AT3G09550 [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
 Identities = 51/171 (29%), Positives = 77/171 (45%)

Query:    10 YEDEIGQ-------EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFF 62
             ++DE+ Q       E+  LG T L  AA+   ID VKELL   + E L +KN  G  A  
Sbjct:   124 FDDEVAQIMTSVVNEVNELGETPLFTAAEKGNIDVVKELLPYTTIESLMQKNLSGFDALH 183

Query:    63 YAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDE 122
              A   G   IV+  ++    ++         P+V AA  G  + V  L  K    L    
Sbjct:   184 IACSQGHRSIVQLLLEHEPQLSKTVAQSNATPLVSAATRGHSEVVNELLAKDSSLLEISR 243

Query:   123 CI-ELLVKLIETDLYAVALRLLKDR-PQLATKRDRNEETALHVLARKNLTS 171
                +  + L     +   +R L D+ PQLA + D+  +T+LH +A K ++S
Sbjct:   244 SNGKNALHLAARQGHVDIVRTLLDKDPQLARRTDKKGQTSLH-MAVKGVSS 293

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2157553 AT5G54710 "AT5G54710" [Arabidopsis thaliana (taxid:3702)]

 Score = 103 (41.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 45/151 (29%), Positives = 73/151 (48%)

Query:    18 ITNL-GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
             +TN+ GNT LH+AA+   I+ + ++L+    E + K NK G TAF  A  +  V      
Sbjct:    97 VTNVDGNTPLHLAAEIGNINILWKMLETGEAECM-KINKQGQTAFILACLNNNVNSARIL 155

Query:    77 MKGNKDIAMVPGGDGTLPIVRAAALGQRQTVV-LLYEKTKGSL--TDDECIELLVKLIET 133
             ++G   + MV         + AA   Q+Q ++  + EK    +   D+E   LL K  ++
Sbjct:   156 VEGTSSMTMVE--------LNAAFSEQQQVIIDSILEKFPNLILDADEEQSTLLHKACKS 207

Query:   134 DLYAVALRLLK-D-RPQLATKRDRNEETALH 162
                 +A  LL  D   ++A K D++  T LH
Sbjct:   208 GNLEMARTLLDVDVNQEIAEKVDKDGLTPLH 238

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2026489 AT1G07710 "AT1G07710" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
 Identities = 40/161 (24%), Positives = 69/161 (42%)

Query:    11 EDEIGQEI---TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGS 67
             E E+ Q +      G TAL+VAA+   ++ VKE++       +  K + G  AF  AA  
Sbjct:    52 ESELNQLLGKQNQSGETALYVAAEYGDVEIVKEMINCYDLALVEIKARNGFDAFHIAAKQ 111

Query:    68 GMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYE--KTKGSLTDDECIE 125
             G +++++   + + ++AM      T  +  AA  G  + V  L E   +   +       
Sbjct:   112 GDLDVLKVLAEAHSELAMTVDLSNTTALHTAATQGHTEVVNFLLELGSSLAGIAKSNGKT 171

Query:   126 LLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLAR 166
              L          V   LL   P +A + D+  +TALH+  +
Sbjct:   172 ALHSASRNGHVKVIKALLASEPAIAIRMDKKGQTALHMAVK 212

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_scaffold_152000027 hypothetical protein (354 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	375
pfam13962	114	pfam13962, PGG, Domain of unknown function	9e-28
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	5e-11
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-07
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-07
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-06
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.001

>gnl|CDD|222475 pfam13962, PGG, Domain of unknown function

 Score =  104 bits (263), Expect = 9e-28
 Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 13/119 (10%)

Query: 216 WMKDTASSCMIVATLIATIVFAAAITVPGGNKEDT-----GLPFFR-QKASFKIFAVSNV 269
           W++ T +S ++VATLIAT+ FAA  T PGG  +D      G P    +   FK F VSN 
Sbjct: 3   WLEKTRNSLLVVATLIATVTFAAGFTPPGGYWQDDGGHHAGTPILAGKPRRFKAFFVSNT 62

Query: 270 ISLVASSVSIVNFLSIVAPRYAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIV 328
           I+ VAS V+++  L IV        F   LPR LL     L++++ ++MV F+A SY V
Sbjct: 63  IAFVASLVAVILLLYIV------PSFSRRLPR-LLALLTLLWLSLLSLMVAFAAGSYRV 114

The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known. Length = 114

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 59.3 bits (144), Expect = 5e-11
 Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 3/94 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
                G T LH+AA    ++ VK LL+  +  D+  K+  G T    AA +G +EIV+  
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGA--DVNAKDNDGRTPLHLAAKNGHLEIVKLL 59

Query: 77  MKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLL 110
           ++   D+      DG  P+  AA  G    V LL
Sbjct: 60  LEKGADVNAR-DKDGNTPLHLAARNGNLDVVKLL 92

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 18  ITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
               GNT LH+AA+   +D VK LLK     D+  ++K G T    AA +G +E+V+
Sbjct: 69  RDKDGNTPLHLAARNGNLDVVKLLLK--HGADVNARDKDGRTPLHLAAKNGHLEVVK 123

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 4/66 (6%)

Query: 20 NLGNT--ALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAM 77
          NLG+T  ALH+AA+   ++ VK LL+  +  D+  K+K G TA   AA +G +EIV+  +
Sbjct: 24 NLGDTDTALHLAARNGNLEIVKLLLEHGA--DVNAKDKDGNTALHLAARNGNLEIVKLLL 81

Query: 78 KGNKDI 83
          +   DI
Sbjct: 82 EHGADI 87

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 26  LHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAM 85
           LH+AA+   ++ VK LL+     D+   +    TA   AA +G +EIV+  ++   D+  
Sbjct: 1   LHLAAKNGNLELVKLLLE--KGADVNLGDT--DTALHLAARNGNLEIVKLLLEHGADVNA 56

Query: 86  VPGGDGTLPIVRAAALGQRQTVVLLYEK 113
                 T  +  AA  G  + V LL E 
Sbjct: 57  KDKDGNT-ALHLAARNGNLEIVKLLLEH 83

Length = 91

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          G TALH AA +  ++ VK LL+     D+ + ++ G TA   AA +G +E+++
Sbjct: 1  GRTALHKAAISGRLELVKYLLEK--GVDINRTDEDGNTALHIAAENGNLEVLK 51

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYA 64
            GNT LH+AA+   ++ V+ LLK     DL  ++  G TA   A
Sbjct: 14 GNGNTPLHLAAKYGALELVQWLLKP--GVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 35.6 bits (83), Expect = 0.001
 Identities = 11/22 (50%), Positives = 16/22 (72%)

Query: 22 GNTALHVAAQANCIDFVKELLK 43
          GNT LH+AA+   ++ VK LL+
Sbjct: 2  GNTPLHLAARNGHLEVVKLLLE 23

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	375
KOG4412	226	consensus 26S proteasome regulatory complex, subun	100.0
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
KOG4412	226	consensus 26S proteasome regulatory complex, subun	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	99.98
PHA02875	413	ankyrin repeat protein; Provisional	99.97
PHA02878	477	ankyrin repeat protein; Provisional	99.97
PHA02874	434	ankyrin repeat protein; Provisional	99.97
PHA02874	434	ankyrin repeat protein; Provisional	99.97
PHA03100	480	ankyrin repeat protein; Provisional	99.97
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.97
PHA02798	489	ankyrin-like protein; Provisional	99.96
KOG0510	929	consensus Ankyrin repeat protein [General function	99.96
PHA02875	413	ankyrin repeat protein; Provisional	99.96
PHA03095	471	ankyrin-like protein; Provisional	99.96
PHA03095	471	ankyrin-like protein; Provisional	99.96
PHA02859	209	ankyrin repeat protein; Provisional	99.96
PHA03100	480	ankyrin repeat protein; Provisional	99.96
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.96
PHA02989	494	ankyrin repeat protein; Provisional	99.96
PHA02878	477	ankyrin repeat protein; Provisional	99.96
PHA02876	682	ankyrin repeat protein; Provisional	99.96
PHA02946	446	ankyin-like protein; Provisional	99.95
PHA02876	682	ankyrin repeat protein; Provisional	99.95
KOG0510	929	consensus Ankyrin repeat protein [General function	99.95
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.95
PHA02989	494	ankyrin repeat protein; Provisional	99.94
PHA02859	209	ankyrin repeat protein; Provisional	99.94
PHA02798	489	ankyrin-like protein; Provisional	99.94
PF13962	113	PGG: Domain of unknown function	99.94
PHA02917	661	ankyrin-like protein; Provisional	99.94
PHA02795	437	ankyrin-like protein; Provisional	99.94
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.93
KOG0508	615	consensus Ankyrin repeat protein [General function	99.92
PHA02730	672	ankyrin-like protein; Provisional	99.92
PHA02795	437	ankyrin-like protein; Provisional	99.92
PHA02917	661	ankyrin-like protein; Provisional	99.91
PHA02792	631	ankyrin-like protein; Provisional	99.91
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.91
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.9
KOG0508	615	consensus Ankyrin repeat protein [General function	99.9
PHA02743	166	Viral ankyrin protein; Provisional	99.9
KOG0514	452	consensus Ankyrin repeat protein [General function	99.9
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.9
PHA02730	672	ankyrin-like protein; Provisional	99.89
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.89
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.89
PHA02741	169	hypothetical protein; Provisional	99.88
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.87
PHA02743	166	Viral ankyrin protein; Provisional	99.86
PHA02741	169	hypothetical protein; Provisional	99.86
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.86
KOG0514	452	consensus Ankyrin repeat protein [General function	99.85
PHA02736	154	Viral ankyrin protein; Provisional	99.84
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.84
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.83
PHA02884	300	ankyrin repeat protein; Provisional	99.83
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.83
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.82
PHA02736	154	Viral ankyrin protein; Provisional	99.82
PHA02884	300	ankyrin repeat protein; Provisional	99.81
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.81
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.8
PHA02792	631	ankyrin-like protein; Provisional	99.78
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.78
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.77
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.75
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.73
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.72
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.7
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.68
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.64
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.61
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.61
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.56
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.56
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.49
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.47
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.45
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.45
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.45
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.44
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.44
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.42
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.42
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.33
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.27
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.24
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.97
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.89
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.79
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.75
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.75
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.66
KOG0522	560	consensus Ankyrin repeat protein [General function	98.64
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.64
PF13606	30	Ank_3: Ankyrin repeat	98.62
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.58
PF13606	30	Ank_3: Ankyrin repeat	98.56
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.55
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.55
KOG0522	560	consensus Ankyrin repeat protein [General function	98.4
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.38
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.36
KOG0520	975	consensus Uncharacterized conserved protein, conta	98.25
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.21
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.21
KOG0521	785	consensus Putative GTPase activating proteins (GAP	98.17
KOG0511	516	consensus Ankyrin repeat protein [General function	97.99
KOG2384	223	consensus Major histocompatibility complex protein	97.96
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.94
KOG2384	223	consensus Major histocompatibility complex protein	97.88
KOG0511	516	consensus Ankyrin repeat protein [General function	97.72
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.71
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.62
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.53
KOG2505	591	consensus Ankyrin repeat protein [General function	96.42
KOG2505	591	consensus Ankyrin repeat protein [General function	95.83
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	92.16
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	88.7
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	88.07
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	85.44
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	84.36
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	80.21

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=6.8e-40  Score=262.87  Aligned_cols=199  Identities=19%  Similarity=0.186  Sum_probs=180.9

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHcc-C
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG-N   80 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~   80 (375)
                      .+.+++.+.+-.++.+.|.+|+||||+||..|+.++|++|++.. +..+|.+|..|+||||.|+..|+.++|+.|+.+ +
T Consensus        18 kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~-nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~   96 (226)
T KOG4412|consen   18 KVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQP-NVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSG   96 (226)
T ss_pred             HHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcC-CCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCC
Confidence            46788888887888887779999999999999999999999863 667889999999999999999999999999999 8


Q ss_pred             CCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCc
Q 037666           81 KDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEET  159 (375)
Q Consensus        81 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T  159 (375)
                      +++ +..++.|+||||+|+..|+.+++++|+++++ ++.+|..|.||||.|+.-|..+++++|+.. ++.+|.+|+.|+|
T Consensus        97 adv-na~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~-~a~~n~qDk~G~T  174 (226)
T KOG4412|consen   97 ADV-NATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQ-GAPLNTQDKYGFT  174 (226)
T ss_pred             CCc-ceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhc-CCCCCcccccCcc
Confidence            886 8999999999999999999999999999999 999999999999999999999999999998 8999999999999


Q ss_pred             HHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHHHHHH
Q 037666          160 ALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHKELKR  211 (375)
Q Consensus       160 ~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~~l~~  211 (375)
                      |||.|..-+++       ++..+|  ++++.+..|++| ||+..+...-.+..+
T Consensus       175 pL~~al~e~~~-------d~a~lLV~~gAd~~~edke~-t~~~~a~~~l~~alk  220 (226)
T KOG4412|consen  175 PLHHALAEGHP-------DVAVLLVRAGADTDREDKEG-TALRIACNELLEALK  220 (226)
T ss_pred             HHHHHHhccCc-------hHHHHHHHhccceeeccccC-chHHHHHHHHHHHHH
Confidence            99999666766       676666  789999999999 999888776655444

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=100.00  E-value=1.2e-33  Score=267.00  Aligned_cols=193  Identities=23%  Similarity=0.253  Sum_probs=176.1

Q ss_pred             CHHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchh-cCCChHHHHHHHcCcHHHHHHHHcc
Q 037666            1 AVAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKN-KIGCTAFFYAAGSGMVEIVEEAMKG   79 (375)
Q Consensus         1 e~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d-~~g~tpLh~Aa~~g~~~iv~~Ll~~   79 (375)
                      |+++++++..|.+++.. |.+|.|+||+||.+++.+++++|+++  ++++|..+ .-|.||||||+++|+..+|+.|+++
T Consensus        58 ~~v~~lve~~g~~v~~~-D~~g~tlLHWAAiNNrl~v~r~li~~--gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqh  134 (600)
T KOG0509|consen   58 ETVKELVESEGESVNNP-DREGVTLLHWAAINNRLDVARYLISH--GADVNAIGGVLGSTPLHWAARNGHISVVDLLLQH  134 (600)
T ss_pred             HHHHHHHhhcCcCCCCC-CcCCccceeHHHHcCcHHHHHHHHHc--CCCccccCCCCCCCcchHHHHcCcHHHHHHHHHc
Confidence            35667777669999998 99999999999999999999999999  89999998 6799999999999999999999999


Q ss_pred             CCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCccccccc-CCC
Q 037666           80 NKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRD-RNE  157 (375)
Q Consensus        80 ~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d-~~G  157 (375)
                      |++. +.+|.+|.+|+|+|++.|+.-.+-+++.++. ++.+|.+|+||||+|+.+|+...++.||+- +..++.+| ++|
T Consensus       135 GAdp-t~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f-~a~~~~~d~~~g  212 (600)
T KOG0509|consen  135 GADP-TLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKF-GASLLLTDDNHG  212 (600)
T ss_pred             CCCC-ceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHh-cccccccccccC
Confidence            9996 9999999999999999999999999999999 999999999999999999998888888888 77777776 999


Q ss_pred             CcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          158 ETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       158 ~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      +||||+|+..|+.       .+.+++  -+++.+..|.+|+||+++|.+.
T Consensus       213 ~TpLHwa~~~gN~-------~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  213 NTPLHWAVVGGNL-------TAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             CchHHHHHhcCCc-------ceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            9999999999988       555555  4477888999999999999766

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=2e-32  Score=264.82  Aligned_cols=195  Identities=17%  Similarity=0.193  Sum_probs=173.1

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcC--cHHHHHHHHcc
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG--MVEIVEEAMKG   79 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g--~~~iv~~Ll~~   79 (375)
                      +++++|+++|+++|.+ |.+|+||||+|+..|+.++|+.|+++  |++++.+|.+|+||||+|+..+  +.+++++|++.
T Consensus        53 ~iv~~Ll~~Gadvn~~-d~~G~TpLh~Aa~~g~~eiv~lLL~~--GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~  129 (446)
T PHA02946         53 RFVEELLHRGYSPNET-DDDGNYPLHIASKINNNRIVAMLLTH--GADPNACDKQHKTPLYYLSGTDDEVIERINLLVQY  129 (446)
T ss_pred             HHHHHHHHCcCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHC--cCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence            5788899999999997 99999999999999999999999999  8999999999999999998866  48999999999


Q ss_pred             CCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcC--cHHHHHHHHhcCCcccccccCC
Q 037666           80 NKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETD--LYAVALRLLKDRPQLATKRDRN  156 (375)
Q Consensus        80 ~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~--~~~~v~~LL~~~~~~~~~~d~~  156 (375)
                      |+++....|.+|.|||| |+..|+.+++++|++.+. .+.+|..|+||||.|+..+  +.+++++|++. |.+++.+|.+
T Consensus       130 Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~-Gadin~~d~~  207 (446)
T PHA02946        130 GAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKL-GISPSKPDHD  207 (446)
T ss_pred             CCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHc-CCCCcccCCC
Confidence            99974457999999998 677899999999999998 8889999999999998754  46889999888 9999999999


Q ss_pred             CCcHHHHHHHhcCCCCCCCccchhhcc-chhhHhhhcCCCCChhhhhHHHH
Q 037666          157 EETALHVLARKNLTSSNQNPCGVENVV-PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       157 G~T~Lh~A~~~~~~~~~~~~~~v~~~L-~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      |+||||+|++.+...     .++.++| .+++++.+|.+|+||+++|.+..
T Consensus       208 G~TpLH~Aa~~~~~~-----~~iv~lLl~gadin~~d~~G~TpLh~A~~~~  253 (446)
T PHA02946        208 GNTPLHIVCSKTVKN-----VDIINLLLPSTDVNKQNKFGDSPLTLLIKTL  253 (446)
T ss_pred             CCCHHHHHHHcCCCc-----HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC
Confidence            999999999986321     0455554 78999999999999999988763

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=4.8e-33  Score=223.48  Aligned_cols=177  Identities=20%  Similarity=0.137  Sum_probs=158.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhc-CCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHH
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNK-IGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAA  100 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~-~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~  100 (375)
                      +.++.+.+++.....-++++++.. +..++.+|. +|+|||||||+.|+.+++++|++...-.++.+|..|+||||+|+.
T Consensus         3 ~~~~~~~~~~~~~~~kveel~~s~-~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s   81 (226)
T KOG4412|consen    3 YASLGKAICENCEEFKVEELIQSD-PKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAAS   81 (226)
T ss_pred             ccchHHHHHhhchHHHHHHHHhcC-hhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhh
Confidence            568899999999999999999986 667776665 999999999999999999999964322347789999999999999


Q ss_pred             cCcHHHHHHHHHh-cc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccc
Q 037666          101 LGQRQTVVLLYEK-TK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCG  178 (375)
Q Consensus       101 ~g~~~iv~~Ll~~-~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~  178 (375)
                      .|+.++|+.|+.+ ++ ++..+..|+|+||+|+.+|..+++..|+++ |+.++.+|..|.||||-|+..|..       +
T Consensus        82 ~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~-ga~i~~kD~~~qtplHRAAavGkl-------k  153 (226)
T KOG4412|consen   82 NGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEK-GALIRIKDKQGQTPLHRAAAVGKL-------K  153 (226)
T ss_pred             cCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhc-CCCCcccccccCchhHHHHhccch-------h
Confidence            9999999999999 66 888999999999999999999999999998 899999999999999999999988       7


Q ss_pred             hhhcc--chhhHhhhcCCCCChhhhh-HHHHH
Q 037666          179 VENVV--PKKLAEAINTGGLTPTALF-SEKHK  207 (375)
Q Consensus       179 v~~~L--~~~~~~~~n~~g~tpl~~a-~~~~~  207 (375)
                      +.++|  .++.+|.+|+.|+||++.+ ++.|-
T Consensus       154 vie~Li~~~a~~n~qDk~G~TpL~~al~e~~~  185 (226)
T KOG4412|consen  154 VIEYLISQGAPLNTQDKYGFTPLHHALAEGHP  185 (226)
T ss_pred             hHHHHHhcCCCCCcccccCccHHHHHHhccCc
Confidence            88887  7799999999999999998 55543

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.8e-32  Score=245.44  Aligned_cols=187  Identities=16%  Similarity=0.073  Sum_probs=162.9

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      +++++|+++|++  .. |.+|+||||+|+..|+.++++.|++.  +++++..|  |+||||+|+..|+.++++.|++.++
T Consensus        13 ~~~~~Lis~~a~--~~-D~~G~TpLh~Aa~~g~~eiv~~Ll~~--ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Ga   85 (284)
T PHA02791         13 QLKSFLSSKDAF--KA-DVHGHSALYYAIADNNVRLVCTLLNA--GALKNLLE--NEFPLHQAATLEDTKIVKILLFSGM   85 (284)
T ss_pred             HHHHHHHhCCCC--CC-CCCCCcHHHHHHHcCCHHHHHHHHHC--cCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCC
Confidence            578899998884  44 88999999999999999999999999  77777654  7899999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchh-hHHHHHHHhcCcHHHHHHHHhcCCccccccc-CCCC
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDEC-IELLVKLIETDLYAVALRLLKDRPQLATKRD-RNEE  158 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g-~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d-~~G~  158 (375)
                      ++ +.+|.+|+||||+|+..|+.+++++|++.++ ++.++..| .||||+|+..|+.+++++|+++.+..   .| ..|+
T Consensus        86 dv-n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~---~d~~~g~  161 (284)
T PHA02791         86 DD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAILL  161 (284)
T ss_pred             CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc---cccccCc
Confidence            86 8899999999999999999999999999998 77777777 59999999999999999999873322   23 3589


Q ss_pred             cHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCCh-hhhhHHHH
Q 037666          159 TALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTP-TALFSEKH  206 (375)
Q Consensus       159 T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tp-l~~a~~~~  206 (375)
                      ||||+|+++|+.       ++.++|  ++++++.+|+.|.|| +++|.+..
T Consensus       162 TpLh~Aa~~g~~-------eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~  205 (284)
T PHA02791        162 SCIHITIKNGHV-------DMMILLLDYMTSTNTNNSLLFIPDIKLAIDNK  205 (284)
T ss_pred             cHHHHHHHcCCH-------HHHHHHHHCCCCCCcccCCCCChHHHHHHHcC
Confidence            999999999988       888877  788899999999987 89887654

>PHA02791 ankyrin-like protein; Provisional

Probab=99.98  E-value=6.6e-32  Score=244.52  Aligned_cols=185  Identities=17%  Similarity=0.064  Sum_probs=166.1

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.++|.++|++++..   +|+||||+|+..|+.++++.|+++  +++++.+|.+|+||||+|+..|+.+++++|++.++
T Consensus        44 eiv~~Ll~~ga~~n~~---d~~TpLh~Aa~~g~~eiV~lLL~~--Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~ga  118 (284)
T PHA02791         44 RLVCTLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILLFS--GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNW  118 (284)
T ss_pred             HHHHHHHHCcCCCcCC---CCCCHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence            5678899999988865   479999999999999999999998  89999999999999999999999999999999999


Q ss_pred             CCccccCCCC-ChHHHHHHHcCcHHHHHHHHHhccCCccc-chhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCc
Q 037666           82 DIAMVPGGDG-TLPIVRAAALGQRQTVVLLYEKTKGSLTD-DECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEET  159 (375)
Q Consensus        82 ~~~~~~d~~g-~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~d-~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T  159 (375)
                      ++ +.++..| .||||+|+..|+.+++++|+++++ +..| ..|+||||+|+++|+.++++.|+++ |+++|.+|..|.|
T Consensus       119 di-n~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~-~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~-gAd~n~~d~~g~t  195 (284)
T PHA02791        119 RL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP-STFDLAILLSCIHITIKNGHVDMMILLLDY-MTSTNTNNSLLFI  195 (284)
T ss_pred             Cc-CccCCCCCcHHHHHHHHcCCHHHHHHHHhcCC-cccccccCccHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCC
Confidence            97 6778877 599999999999999999999876 2223 3589999999999999999999998 9999999999998


Q ss_pred             H-HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhh
Q 037666          160 A-LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALF  202 (375)
Q Consensus       160 ~-Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a  202 (375)
                      | ||+|+.+++.       +++++|  +|++++.+|..| +|++.+
T Consensus       196 ~~L~~Aa~~~~~-------e~v~lLl~~Ga~in~~~~~~-~~l~~~  233 (284)
T PHA02791        196 PDIKLAIDNKDL-------EMLQALFKYDINIYSVNLEN-VLLDDA  233 (284)
T ss_pred             hHHHHHHHcCCH-------HHHHHHHHCCCCCccCcccC-ccCCCH
Confidence            7 9999999988       888887  889999999854 888654

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.97  E-value=6.6e-31  Score=253.84  Aligned_cols=194  Identities=15%  Similarity=0.029  Sum_probs=177.8

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.++|.++|++++.. +.+|.||||+|+..|+.+++++|+++  +++++..+.+|.||||+|+..|+.++++.|++.++
T Consensus        16 ~iv~~Ll~~g~~~n~~-~~~g~tpL~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~   92 (413)
T PHA02875         16 DIARRLLDIGINPNFE-IYDGISPIKLAMKFRDSEAIKLLMKH--GAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGK   92 (413)
T ss_pred             HHHHHHHHCCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHhC--CCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCC
Confidence            4678888899999987 88999999999999999999999999  88888888999999999999999999999999998


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      +.....+.+|.||||+|+..|+.+++++|++.|+ ++.++.+|.||||.|+..|+.++++.|++. |.+++.+|..|+||
T Consensus        93 ~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~Tp  171 (413)
T PHA02875         93 FADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDH-KACLDIEDCCGCTP  171 (413)
T ss_pred             cccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCH
Confidence            7766778889999999999999999999999999 888999999999999999999999999998 89999999999999


Q ss_pred             HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCC-ChhhhhHHHH
Q 037666          161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGL-TPTALFSEKH  206 (375)
Q Consensus       161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~-tpl~~a~~~~  206 (375)
                      ||+|+..|+.       ++.++|  .|++++..+.+|. ||+++|.+..
T Consensus       172 L~~A~~~g~~-------eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~  213 (413)
T PHA02875        172 LIIAMAKGDI-------AICKMLLDSGANIDYFGKNGCVAALCYAIENN  213 (413)
T ss_pred             HHHHHHcCCH-------HHHHHHHhCCCCCCcCCCCCCchHHHHHHHcC
Confidence            9999999987       777777  7888898888875 7888776543

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.97  E-value=9.6e-31  Score=256.98  Aligned_cols=190  Identities=17%  Similarity=0.130  Sum_probs=162.6

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHH---------------------------------------
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELL---------------------------------------   42 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll---------------------------------------   42 (375)
                      +++++|.++|+++|.. |.+|+||||+||..|+.+.+++|+                                       
T Consensus        51 e~vk~Ll~~gadvn~~-d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~  129 (477)
T PHA02878         51 DVVKSLLTRGHNVNQP-DHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQ  129 (477)
T ss_pred             HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHHHHHHHhCcccCcc
Confidence            5678888899999987 999999999999887665544444                                       


Q ss_pred             -------------------------HcCChhhHhchhcC-CChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHH
Q 037666           43 -------------------------KMMSTEDLAKKNKI-GCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIV   96 (375)
Q Consensus        43 -------------------------~~~~~~~~~~~d~~-g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh   96 (375)
                                               ++  |++++.+|.. |+||||+|+..|+.+++++|++.|+++ +.+|.+|.||||
T Consensus       130 ~~~~~~~~~~~~~~~~~~~iv~~Ll~~--gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~-n~~d~~g~tpLh  206 (477)
T PHA02878        130 TIDLVYIDKKSKDDIIEAEITKLLLSY--GADINMKDRHKGNTALHYATENKDQRLTELLLSYGANV-NIPDKTNNSPLH  206 (477)
T ss_pred             cCcHHHHhhccchhhHHHHHHHHHHHc--CCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCC-CCcCCCCCCHHH
Confidence                                     33  4556677777 999999999999999999999999986 889999999999


Q ss_pred             HHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhc-CcHHHHHHHHhcCCcccccccC-CCCcHHHHHHHhcCCCCC
Q 037666           97 RAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIET-DLYAVALRLLKDRPQLATKRDR-NEETALHVLARKNLTSSN  173 (375)
Q Consensus        97 ~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~-~~~~~v~~LL~~~~~~~~~~d~-~G~T~Lh~A~~~~~~~~~  173 (375)
                      .|+..|+.+++++|++.++ ++.+|..|+||||+|+.. ++.++++.|+++ |.++|.++. .|+||||+|+  +..   
T Consensus       207 ~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~-gadvn~~~~~~g~TpLh~A~--~~~---  280 (477)
T PHA02878        207 HAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEH-GVDVNAKSYILGLTALHSSI--KSE---  280 (477)
T ss_pred             HHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHc-CCCCCccCCCCCCCHHHHHc--cCH---
Confidence            9999999999999999998 888999999999999975 689999999988 899998876 7999999994  333   


Q ss_pred             CCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          174 QNPCGVENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       174 ~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                          ++.++|  .|++++.+|.+|.||+++|.+.
T Consensus       281 ----~~v~~Ll~~gadin~~d~~g~TpL~~A~~~  310 (477)
T PHA02878        281 ----RKLKLLLEYGADINSLNSYKLTPLSSAVKQ  310 (477)
T ss_pred             ----HHHHHHHHCCCCCCCcCCCCCCHHHHHHHH
Confidence                666666  7899999999999999998764

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.97  E-value=1.2e-30  Score=253.36  Aligned_cols=195  Identities=16%  Similarity=0.155  Sum_probs=128.1

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      ++.++...+..++.. +.+|.||||.|++.|+.++|++|++.  |++++..+..|.||||+|+..|+.+++++|++.|++
T Consensus        17 v~~ll~~~~~~~n~~-~~~~~tpL~~A~~~g~~~iv~~Ll~~--Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~   93 (434)
T PHA02874         17 IEKIIKNKGNCINIS-VDETTTPLIDAIRSGDAKIVELFIKH--GADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVD   93 (434)
T ss_pred             HHHHHHcCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence            445555566666655 56677777777777777777777776  666666666777777777777777777666665533


Q ss_pred             C----------------------ccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHH
Q 037666           83 I----------------------AMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVA  139 (375)
Q Consensus        83 ~----------------------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v  139 (375)
                      .                      .+.+|..|.||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+.+++.+++
T Consensus        94 ~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv  173 (434)
T PHA02874         94 TSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDII  173 (434)
T ss_pred             CCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHH
Confidence            1                      13456667777777777777777777777666 666666777777777777777777


Q ss_pred             HHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHHH
Q 037666          140 LRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHKE  208 (375)
Q Consensus       140 ~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~~  208 (375)
                      +.|++. |.+++.+|.+|+||||+|++.|..       ++.++|  .+++++.++..|.||++.|...+.+
T Consensus       174 ~~Ll~~-g~~~n~~~~~g~tpL~~A~~~g~~-------~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~  236 (434)
T PHA02874        174 KLLLEK-GAYANVKDNNGESPLHNAAEYGDY-------ACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRS  236 (434)
T ss_pred             HHHHHC-CCCCCCCCCCCCCHHHHHHHcCCH-------HHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChH
Confidence            766666 666666677777777777776655       555555  4455556666666666666554433

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.97  E-value=1.5e-30  Score=252.69  Aligned_cols=194  Identities=20%  Similarity=0.168  Sum_probs=177.3

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC---------------------hhhHhchhcCCChH
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMS---------------------TEDLAKKNKIGCTA   60 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~---------------------~~~~~~~d~~g~tp   60 (375)
                      +++++|.++|++++.. +..|.||||.|+..|+.+++++|+++..                     +.+++.+|..|.||
T Consensus        49 ~iv~~Ll~~Ga~~n~~-~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~  127 (434)
T PHA02874         49 KIVELFIKHGADINHI-NTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTF  127 (434)
T ss_pred             HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccH
Confidence            5678889999999987 8899999999999999999999999731                     23466788899999


Q ss_pred             HHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHH
Q 037666           61 FFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVA  139 (375)
Q Consensus        61 Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v  139 (375)
                      ||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..|+.+++++|++.++ .+..|..|+||||.|+..|+.+++
T Consensus       128 Lh~A~~~~~~~~v~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv  206 (434)
T PHA02874        128 LHYAIKKGDLESIKMLFEYGADV-NIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACI  206 (434)
T ss_pred             HHHHHHCCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence            99999999999999999999996 8899999999999999999999999999998 888999999999999999999999


Q ss_pred             HHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccchhhHhhhcCCCCChhhhhHHH
Q 037666          140 LRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       140 ~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      ++|++. +.+++.+|.+|.||||.|+..+..       .+..++.+++++.+|.+|.||+++|.+.
T Consensus       207 ~~Ll~~-g~~i~~~~~~g~TpL~~A~~~~~~-------~i~~Ll~~~~in~~d~~G~TpLh~A~~~  264 (434)
T PHA02874        207 KLLIDH-GNHIMNKCKNGFTPLHNAIIHNRS-------AIELLINNASINDQDIDGSTPLHHAINP  264 (434)
T ss_pred             HHHHhC-CCCCcCCCCCCCCHHHHHHHCChH-------HHHHHHcCCCCCCcCCCCCCHHHHHHhc
Confidence            999998 889999999999999999998755       6666668888999999999999999864

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.97  E-value=1.7e-30  Score=255.84  Aligned_cols=193  Identities=19%  Similarity=0.115  Sum_probs=170.1

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHH--HcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcC--cHHHHHHHH
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAA--QANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG--MVEIVEEAM   77 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~--~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g--~~~iv~~Ll   77 (375)
                      ++.++|.++|++++.. |..|.||||+|+  ..|+.+++++|+++  +.+++..|..|.||||+|+..|  +.++++.|+
T Consensus        87 ~iv~~Ll~~ga~i~~~-d~~g~tpL~~A~~~~~~~~~iv~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll  163 (480)
T PHA03100         87 EIVKLLLEYGANVNAP-DNNGITPLLYAISKKSNSYSIVEYLLDN--GANVNIKNSDGENLLHLYLESNKIDLKILKLLI  163 (480)
T ss_pred             HHHHHHHHCCCCCCCC-CCCCCchhhHHHhcccChHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHcCCChHHHHHHHH
Confidence            4677888899988776 888999999999  88999999999988  7888888999999999999999  899999999


Q ss_pred             ccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchh------hHHHHHHHhcCc--HHHHHHHHhcCCc
Q 037666           78 KGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDEC------IELLVKLIETDL--YAVALRLLKDRPQ  148 (375)
Q Consensus        78 ~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g------~t~Lh~A~~~~~--~~~v~~LL~~~~~  148 (375)
                      +.|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+..|      .||||.|+..++  .++++.|++. |.
T Consensus       164 ~~g~di-n~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~-g~  241 (480)
T PHA03100        164 DKGVDI-NAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSY-GV  241 (480)
T ss_pred             HCCCCc-ccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHc-CC
Confidence            999886 7788899999999999999999999999888 77777777      899999999998  9999999888 88


Q ss_pred             ccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          149 LATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       149 ~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ++|.+|.+|+||||+|+..++.       ++.++|  .|++++.+|.+|.||+++|.+..
T Consensus       242 din~~d~~g~TpL~~A~~~~~~-------~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~  294 (480)
T PHA03100        242 PINIKDVYGFTPLHYAVYNNNP-------EFVKYLLDLGANPNLVNKYGDTPLHIAILNN  294 (480)
T ss_pred             CCCCCCCCCCCHHHHHHHcCCH-------HHHHHHHHcCCCCCccCCCCCcHHHHHHHhC
Confidence            9999999999999999999877       777777  77889999999999999987654

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.97  E-value=1e-29  Score=254.12  Aligned_cols=196  Identities=15%  Similarity=0.033  Sum_probs=166.7

Q ss_pred             HHHHHHhhCc-cccccccCCCCCcHHHHHHHc--CCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCc--HHHHHHH
Q 037666            2 VAKDIYDKYE-DEIGQEITNLGNTALHVAAQA--NCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGM--VEIVEEA   76 (375)
Q Consensus         2 ~v~~lL~~~~-~~~~~~~d~~g~tpLh~A~~~--g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~--~~iv~~L   76 (375)
                      +++++|.++| +++|...|..|.||||+|+..  ++.+++++|+++  |++++.+|.+|.||||+|++.|+  .+++++|
T Consensus       156 eiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~--GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklL  233 (764)
T PHA02716        156 DLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNN--GVNVNLQNNHLITPLHTYLITGNVCASVIKKI  233 (764)
T ss_pred             HHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHH
Confidence            5778888899 999986578899999998754  678999999999  89999999999999999999995  5999999


Q ss_pred             HccCCCCccccCCCCChHHHHH-------------------------------------HHcCcHHHHHHHHHhcc-CCc
Q 037666           77 MKGNKDIAMVPGGDGTLPIVRA-------------------------------------AALGQRQTVVLLYEKTK-GSL  118 (375)
Q Consensus        77 l~~~~~~~~~~d~~g~tpLh~A-------------------------------------a~~g~~~iv~~Ll~~~~-~~~  118 (375)
                      ++.|+++ +.+|.+|.||||.|                                     ++.|+.+++++|++.++ ++.
T Consensus       234 Le~GADV-N~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~  312 (764)
T PHA02716        234 IELGGDM-DMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHY  312 (764)
T ss_pred             HHcCCCC-CCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceec
Confidence            9999996 88999999999975                                     44578899999999999 888


Q ss_pred             ccchhhHHHHHHHh--cCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcC-----CC--CCCCccchhhcc--chhh
Q 037666          119 TDDECIELLVKLIE--TDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNL-----TS--SNQNPCGVENVV--PKKL  187 (375)
Q Consensus       119 ~d~~g~t~Lh~A~~--~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~-----~~--~~~~~~~v~~~L--~~~~  187 (375)
                      +|.+|+||||+|+.  +++.++++.|++. |.+++.+|+.|+||||+|+....     .+  ....+.+++++|  +|++
T Consensus       313 kD~~G~TPLH~Aaa~~~~~~eIVklLLe~-GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GAD  391 (764)
T PHA02716        313 KDSAGRTCLHQYILRHNISTDIIKLLHEY-GNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGAD  391 (764)
T ss_pred             cCCCCCCHHHHHHHHhCCCchHHHHHHHc-CCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCC
Confidence            99999999999864  4678999999987 99999999999999999875310     00  000112777777  8899


Q ss_pred             HhhhcCCCCChhhh
Q 037666          188 AEAINTGGLTPTAL  201 (375)
Q Consensus       188 ~~~~n~~g~tpl~~  201 (375)
                      ++.+|..|+||++.
T Consensus       392 In~kn~~G~TPLh~  405 (764)
T PHA02716        392 ITAVNCLGYTPLTS  405 (764)
T ss_pred             CCCcCCCCCChHHH
Confidence            99999999999994

>PHA02798 ankyrin-like protein; Provisional

Probab=99.96  E-value=9.7e-30  Score=250.45  Aligned_cols=195  Identities=16%  Similarity=0.068  Sum_probs=170.6

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHc-----CCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcC---cHHHH
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQA-----NCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG---MVEIV   73 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~-----g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g---~~~iv   73 (375)
                      +++++|.++|+++|.. |..|.||||.|+..     ++.++++.|+++  |+++|.+|.+|+||||+|+..|   +.+++
T Consensus        52 ~iv~~Ll~~Gadvn~~-d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~--GadiN~~d~~G~TpLh~a~~~~~~~~~~iv  128 (489)
T PHA02798         52 DIVKLFINLGANVNGL-DNEYSTPLCTILSNIKDYKHMLDIVKILIEN--GADINKKNSDGETPLYCLLSNGYINNLEIL  128 (489)
T ss_pred             HHHHHHHHCCCCCCCC-CCCCCChHHHHHHhHHhHHhHHHHHHHHHHC--CCCCCCCCCCcCcHHHHHHHcCCcChHHHH
Confidence            6789999999999997 99999999999864     678999999999  8999999999999999999876   78999


Q ss_pred             HHHHccCCCCccccCCCCChHHHHHHHcCc---HHHHHHHHHhcc-CCcc-cchhhHHHHHHHhc----CcHHHHHHHHh
Q 037666           74 EEAMKGNKDIAMVPGGDGTLPIVRAAALGQ---RQTVVLLYEKTK-GSLT-DDECIELLVKLIET----DLYAVALRLLK  144 (375)
Q Consensus        74 ~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~---~~iv~~Ll~~~~-~~~~-d~~g~t~Lh~A~~~----~~~~~v~~LL~  144 (375)
                      ++|++.|+++ +.+|.+|.||||+|++.|+   .+++++|+++|. ++.. +..|.||||.++..    ++.+++++|++
T Consensus       129 ~~Ll~~Gadv-n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~  207 (489)
T PHA02798        129 LFMIENGADT-TLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVD  207 (489)
T ss_pred             HHHHHcCCCc-cccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHH
Confidence            9999999997 8999999999999999998   999999999998 6665 45789999998764    36778877776


Q ss_pred             cC--------------------------------------CcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--c
Q 037666          145 DR--------------------------------------PQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--P  184 (375)
Q Consensus       145 ~~--------------------------------------~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~  184 (375)
                      +.                                      +.++|.+|..|+||||+|+..++.       ++.++|  .
T Consensus       208 ~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~-------~~v~~LL~~  280 (489)
T PHA02798        208 NGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNR-------KIFEYLLQL  280 (489)
T ss_pred             CCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcH-------HHHHHHHHc
Confidence            51                                      235677889999999999999887       777777  7


Q ss_pred             hhhHhhhcCCCCChhhhhHHHHH
Q 037666          185 KKLAEAINTGGLTPTALFSEKHK  207 (375)
Q Consensus       185 ~~~~~~~n~~g~tpl~~a~~~~~  207 (375)
                      |++++.+|..|+||+++|.+.+.
T Consensus       281 GAdin~~d~~G~TpL~~A~~~~~  303 (489)
T PHA02798        281 GGDINIITELGNTCLFTAFENES  303 (489)
T ss_pred             CCcccccCCCCCcHHHHHHHcCc
Confidence            89999999999999999987543

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.96  E-value=5.8e-28  Score=232.91  Aligned_cols=183  Identities=25%  Similarity=0.239  Sum_probs=158.3

Q ss_pred             CccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-------------hhhHhchhcCCChHHHHHHHcCcHHHHHHH
Q 037666           10 YEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMS-------------TEDLAKKNKIGCTAFFYAAGSGMVEIVEEA   76 (375)
Q Consensus        10 ~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~-------------~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L   76 (375)
                      .+..+|.. |++|.||||.|+..|+.++++.+|+...             .+.++..|.+|.||||+|++.|+.+.++.|
T Consensus       214 r~~~in~~-~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~L  292 (929)
T KOG0510|consen  214 RQTHINFD-NNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNL  292 (929)
T ss_pred             hhcccccc-cCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHH
Confidence            44567775 7888999999999999999999987641             133667899999999999999999999999


Q ss_pred             HccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHH-hcc--CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccc--
Q 037666           77 MKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYE-KTK--GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLAT--  151 (375)
Q Consensus        77 l~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~-~~~--~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~--  151 (375)
                      +..|+++ +.+++++.||||.||++|+.+.++-|++ .+.  .+..|..|.||||+|+++||.++++.||++ |++.+  
T Consensus       293 l~~Ga~I-~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~-GA~~~~~  370 (929)
T KOG0510|consen  293 LGFGASI-NSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNK-GALFLNM  370 (929)
T ss_pred             HHcCCcc-cccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhc-Chhhhcc
Confidence            9999997 8999999999999999999999999999 333  556788999999999999999999999998 66665  


Q ss_pred             -cccCCCCcHHHHHHHhcCCCCCCCccchhhcc-chhhHhhhcCCCCChhhh
Q 037666          152 -KRDRNEETALHVLARKNLTSSNQNPCGVENVV-PKKLAEAINTGGLTPTAL  201 (375)
Q Consensus       152 -~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L-~~~~~~~~n~~g~tpl~~  201 (375)
                       ..|.+|+||||+|+..|+.+      .|..++ +|+++..+|+.|++++++
T Consensus       371 ~e~D~dg~TaLH~Aa~~g~~~------av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  371 SEADSDGNTALHLAAKYGNTS------AVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             cccccCCchhhhHHHHhccHH------HHHHHHHcCCceeeccccccccccc
Confidence             56999999999999999884      455555 889999999999998884

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.96  E-value=8.3e-29  Score=239.21  Aligned_cols=192  Identities=17%  Similarity=0.089  Sum_probs=172.5

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhH-hchhcCCChHHHHHHHcCcHHHHHHHHccC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDL-AKKNKIGCTAFFYAAGSGMVEIVEEAMKGN   80 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~-~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~   80 (375)
                      +++++|.++|++++.. +.++.||||.|+..|+.++++.|++.  +.+. +..+.+|+||||+|+..|+.+++++|++.|
T Consensus        49 ~~v~~Ll~~ga~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g  125 (413)
T PHA02875         49 EAIKLLMKHGAIPDVK-YPDIESELHDAVEEGDVKAVEELLDL--GKFADDVFYKDGMTPLHLATILKKLDIMKLLIARG  125 (413)
T ss_pred             HHHHHHHhCCCCcccc-CCCcccHHHHHHHCCCHHHHHHHHHc--CCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence            4778999999998886 88999999999999999999999999  5543 456778999999999999999999999999


Q ss_pred             CCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCC-
Q 037666           81 KDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEE-  158 (375)
Q Consensus        81 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~-  158 (375)
                      ++. +.+|.+|.||||+|+..|+.+++++|+++++ .+.+|..|+||||+|+..|+.++++.|++. |.+++..+.+|. 
T Consensus       126 ad~-~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~-ga~~n~~~~~~~~  203 (413)
T PHA02875        126 ADP-DIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDS-GANIDYFGKNGCV  203 (413)
T ss_pred             CCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCcCCCCCCc
Confidence            996 8899999999999999999999999999999 888999999999999999999999999998 999999998875 


Q ss_pred             cHHHHHHHhcCCCCCCCccchhhcc--chhhHhhh---cCCCCChhhhhHHH
Q 037666          159 TALHVLARKNLTSSNQNPCGVENVV--PKKLAEAI---NTGGLTPTALFSEK  205 (375)
Q Consensus       159 T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~---n~~g~tpl~~a~~~  205 (375)
                      ||+|+|+..+..       ++.++|  +|++++..   +.+|.||++.....
T Consensus       204 t~l~~A~~~~~~-------~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~  248 (413)
T PHA02875        204 AALCYAIENNKI-------DIVRLFIKRGADCNIMFMIEGEECTILDMICNM  248 (413)
T ss_pred             hHHHHHHHcCCH-------HHHHHHHHCCcCcchHhhcCCCchHHHHHHHhh
Confidence            799999999988       888887  67776654   67788999876543

>PHA03095 ankyrin-like protein; Provisional

Probab=99.96  E-value=7e-29  Score=243.82  Aligned_cols=193  Identities=17%  Similarity=0.144  Sum_probs=143.5

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcC-CHHHHHHHHHcCChhhHhchhcCCChHHHHHH--HcCcHHHHHHHHc
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQAN-CIDFVKELLKMMSTEDLAKKNKIGCTAFFYAA--GSGMVEIVEEAMK   78 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g-~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa--~~g~~~iv~~Ll~   78 (375)
                      ++.++|.++|+++|.. |..|+||||+|+..| +.++++.|+++  |++++.+|..|+||||+|+  ..++.++++.|++
T Consensus        64 ~iv~~Ll~~Gadin~~-~~~g~TpLh~A~~~~~~~~iv~lLl~~--ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~  140 (471)
T PHA03095         64 DIVRLLLEAGADVNAP-ERCGFTPLHLYLYNATTLDVIKLLIKA--GADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLR  140 (471)
T ss_pred             HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCcHHHHHHHHHc--CCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHH
Confidence            5678888999999987 889999999999999 59999999999  8999999999999999999  5568899999999


Q ss_pred             cCCCCccccCCCCChHHHHHHHcC--cHHHHHHHHHhcc-CCcccchhhHHHHHHHhc--CcHHHHHHHHhcCCcccccc
Q 037666           79 GNKDIAMVPGGDGTLPIVRAAALG--QRQTVVLLYEKTK-GSLTDDECIELLVKLIET--DLYAVALRLLKDRPQLATKR  153 (375)
Q Consensus        79 ~~~~~~~~~d~~g~tpLh~Aa~~g--~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~--~~~~~v~~LL~~~~~~~~~~  153 (375)
                      .|+++ +.+|..|.||||+|+..+  +.+++++|++.++ .+..|..|+||||.++..  ++.++++.|++. |.+++.+
T Consensus       141 ~gad~-~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~-g~~~~~~  218 (471)
T PHA03095        141 KGADV-NALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRA-GCDPAAT  218 (471)
T ss_pred             cCCCC-CccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHc-CCCCccc
Confidence            99886 788889999999888766  5778888888877 555577777888777753  556666666665 6666666


Q ss_pred             cCCCCcHHHHHHHhcCCCCCCCccchhh-cc-chhhHhhhcCCCCChhhhhHH
Q 037666          154 DRNEETALHVLARKNLTSSNQNPCGVEN-VV-PKKLAEAINTGGLTPTALFSE  204 (375)
Q Consensus       154 d~~G~T~Lh~A~~~~~~~~~~~~~~v~~-~L-~~~~~~~~n~~g~tpl~~a~~  204 (375)
                      |.+|+||||+|+..+....     .+.+ ++ .+.+++.+|.+|+||+++|..
T Consensus       219 d~~g~tpLh~Aa~~~~~~~-----~~v~~ll~~g~din~~d~~g~TpLh~A~~  266 (471)
T PHA03095        219 DMLGNTPLHSMATGSSCKR-----SLVLPLLIAGISINARNRYGQTPLHYAAV  266 (471)
T ss_pred             CCCCCCHHHHHHhcCCchH-----HHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence            6666666666666543200     1111 12 445555555555555555544

>PHA03095 ankyrin-like protein; Provisional

Probab=99.96  E-value=8.6e-29  Score=243.16  Aligned_cols=195  Identities=15%  Similarity=0.103  Sum_probs=174.6

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcC---CHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcC-cHHHHHHHH
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQAN---CIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG-MVEIVEEAM   77 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g---~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g-~~~iv~~Ll   77 (375)
                      ++++.|.++|++++.. |..|+||||+|+..|   +.++++.|++.  |++++.+|..|+||||+|+..| +.+++++|+
T Consensus        28 ~~v~~Ll~~ga~vn~~-~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~--Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl  104 (471)
T PHA03095         28 EEVRRLLAAGADVNFR-GEYGKTPLHLYLHYSSEKVKDIVRLLLEA--GADVNAPERCGFTPLHLYLYNATTLDVIKLLI  104 (471)
T ss_pred             HHHHHHHHcCCCcccC-CCCCCCHHHHHHHhcCCChHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHH
Confidence            4577788899999987 999999999999999   99999999999  8999999999999999999999 599999999


Q ss_pred             ccCCCCccccCCCCChHHHHHH--HcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcC--cHHHHHHHHhcCCccccc
Q 037666           78 KGNKDIAMVPGGDGTLPIVRAA--ALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETD--LYAVALRLLKDRPQLATK  152 (375)
Q Consensus        78 ~~~~~~~~~~d~~g~tpLh~Aa--~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~--~~~~v~~LL~~~~~~~~~  152 (375)
                      +.|+++ +.+|.+|.||||+|+  ..++.+++++|++.++ ++..|..|.||||.|+..+  +.++++.|+++ |.+++.
T Consensus       105 ~~ga~i-n~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~-g~~~~~  182 (471)
T PHA03095        105 KAGADV-NAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDA-GADVYA  182 (471)
T ss_pred             HcCCCC-CCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHc-CCCCcc
Confidence            999996 889999999999999  5668999999999999 8889999999999998865  68899999988 888888


Q ss_pred             ccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          153 RDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       153 ~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      .|..|+||||+|+.......     ++.+.|  .+++++.+|..|.||+|+|+...
T Consensus       183 ~d~~g~t~Lh~~~~~~~~~~-----~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~  233 (471)
T PHA03095        183 VDDRFRSLLHHHLQSFKPRA-----RIVRELIRAGCDPAATDMLGNTPLHSMATGS  233 (471)
T ss_pred             cCCCCCCHHHHHHHHCCCcH-----HHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence            89999999999998743210     555555  78999999999999999998654

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.96  E-value=1.3e-28  Score=214.96  Aligned_cols=174  Identities=13%  Similarity=0.076  Sum_probs=152.3

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcC--cHHHHHHHHccCCCCccccC-CCCChHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG--MVEIVEEAMKGNKDIAMVPG-GDGTLPI   95 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g--~~~iv~~Ll~~~~~~~~~~d-~~g~tpL   95 (375)
                      ...+.||||+|+..|+.+.|+.|++.     ++..|..|.||||+|+..+  +.+++++|++.|+++ +.++ .+|.|||
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~-----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadv-n~~~~~~g~TpL   91 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKF-----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADV-NFKTRDNNLSAL   91 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHh-----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCC-CccCCCCCCCHH
Confidence            45789999999999999999999965     4568899999999999854  899999999999997 6665 5899999


Q ss_pred             HHHHHc---CcHHHHHHHHHhcc-CCcccchhhHHHHHHHh--cCcHHHHHHHHhcCCcccccccCCCCcHHHHH-HHhc
Q 037666           96 VRAAAL---GQRQTVVLLYEKTK-GSLTDDECIELLVKLIE--TDLYAVALRLLKDRPQLATKRDRNEETALHVL-ARKN  168 (375)
Q Consensus        96 h~Aa~~---g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~--~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A-~~~~  168 (375)
                      |+|+..   ++.+++++|+++++ ++.+|.+|+||||.|+.  +++.++++.|++. |.+++.+|.+|+||||.+ +..+
T Consensus        92 h~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~-gadin~~d~~g~t~Lh~~a~~~~  170 (209)
T PHA02859         92 HHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDS-GVSFLNKDFDNNNILYSYILFHS  170 (209)
T ss_pred             HHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHc-CCCcccccCCCCcHHHHHHHhcC
Confidence            998864   47999999999999 89999999999999986  4689999999988 999999999999999975 4455


Q ss_pred             CCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          169 LTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       169 ~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ..       ++.++|  .+++++.+|..|+||+++|..+.
T Consensus       171 ~~-------~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        171 DK-------KIFDFLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             CH-------HHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            55       777777  78999999999999999987653

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.96  E-value=7.7e-29  Score=244.05  Aligned_cols=193  Identities=21%  Similarity=0.163  Sum_probs=172.4

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHH-----HHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHH--HcCcHHHHH
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHV-----AAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAA--GSGMVEIVE   74 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~-----A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa--~~g~~~iv~   74 (375)
                      +++++|.++|++++.. +..|.||||+     |+..|+.++++.|+++  |++++..|..|.||||+|+  ..|+.++++
T Consensus        49 ~ivk~Ll~~g~~~~~~-~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~--ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~  125 (480)
T PHA03100         49 DVVKILLDNGADINSS-TKNNSTPLHYLSNIKYNLTDVKEIVKLLLEY--GANVNAPDNNGITPLLYAISKKSNSYSIVE  125 (480)
T ss_pred             HHHHHHHHcCCCCCCc-cccCcCHHHHHHHHHHHhhchHHHHHHHHHC--CCCCCCCCCCCCchhhHHHhcccChHHHHH
Confidence            5678888899999887 8889999999     9999999999999998  7888999999999999999  999999999


Q ss_pred             HHHccCCCCccccCCCCChHHHHHHHcC--cHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccc
Q 037666           75 EAMKGNKDIAMVPGGDGTLPIVRAAALG--QRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLAT  151 (375)
Q Consensus        75 ~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g--~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~  151 (375)
                      +|++.|+++ +.+|.+|.||||.|+..|  +.+++++|+++++ ++.+|..|.||||.|+..|+.++++.|+++ |.+++
T Consensus       126 ~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~-ga~~~  203 (480)
T PHA03100        126 YLLDNGANV-NIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDN-GADIN  203 (480)
T ss_pred             HHHHcCCCC-CccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHc-CCCcc
Confidence            999999886 788999999999999999  8999999999998 778888999999999999999999999988 88899


Q ss_pred             cccCCC------CcHHHHHHHhcC--CCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          152 KRDRNE------ETALHVLARKNL--TSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       152 ~~d~~G------~T~Lh~A~~~~~--~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ..|..|      .||||.|+..+.  .       ++.++|  .|++++.+|..|.||+++|....
T Consensus       204 ~~~~~~~~~~~~~t~l~~a~~~~~~~~-------~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~  261 (480)
T PHA03100        204 AGDIETLLFTIFETPLHIAACYNEITL-------EVVNYLLSYGVPINIKDVYGFTPLHYAVYNN  261 (480)
T ss_pred             CCCCCCCcHHHHHhHHHHHHHhCcCcH-------HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence            898888      899999999887  5       677766  67889999999999999998753

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.96  E-value=1.3e-28  Score=246.33  Aligned_cols=199  Identities=13%  Similarity=0.029  Sum_probs=163.7

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHH-------------------------------------HHcCCHHHHHHHHHc
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVA-------------------------------------AQANCIDFVKELLKM   44 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A-------------------------------------~~~g~~~~v~~Ll~~   44 (375)
                      +++++|+++|+++|.+ |..|+||||+|                                     ++.|+.++++.|+++
T Consensus       228 eIVklLLe~GADVN~k-D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~  306 (764)
T PHA02716        228 SVIKKIIELGGDMDMK-CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQP  306 (764)
T ss_pred             HHHHHHHHcCCCCCCC-CCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhC
Confidence            5788999999999998 99999999975                                     445788999999998


Q ss_pred             CChhhHhchhcCCChHHHHHHH--cCcHHHHHHHHccCCCCccccCCCCChHHHHHHH--------------cCcHHHHH
Q 037666           45 MSTEDLAKKNKIGCTAFFYAAG--SGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAA--------------LGQRQTVV  108 (375)
Q Consensus        45 ~~~~~~~~~d~~g~tpLh~Aa~--~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~--------------~g~~~iv~  108 (375)
                        +++++.+|.+|+||||+|+.  .++.+++++|++.|+++ +.+|..|.||||+|+.              .++.++++
T Consensus       307 --GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADI-N~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVk  383 (764)
T PHA02716        307 --GVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDL-NEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQ  383 (764)
T ss_pred             --CCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCC-ccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHH
Confidence              89999999999999999864  56899999999999996 8899999999999875              36899999


Q ss_pred             HHHHhcc-CCcccchhhHHHHHH----HhcCcHHHHHHHHhcC-------------------------------------
Q 037666          109 LLYEKTK-GSLTDDECIELLVKL----IETDLYAVALRLLKDR-------------------------------------  146 (375)
Q Consensus       109 ~Ll~~~~-~~~~d~~g~t~Lh~A----~~~~~~~~v~~LL~~~-------------------------------------  146 (375)
                      +|+++|+ ++.+|..|+||||.+    ...++.++++.|+...                                     
T Consensus       384 lLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~  463 (764)
T PHA02716        384 CLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDL  463 (764)
T ss_pred             HHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhh
Confidence            9999999 889999999999942    2346677877776631                                     


Q ss_pred             -----------------------CcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhh
Q 037666          147 -----------------------PQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTAL  201 (375)
Q Consensus       147 -----------------------~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~  201 (375)
                                             +.++|.+|..|+||||+|+..+......+  ++.++|  .|++++.+|++|+||+++
T Consensus       464 ~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~--e~~k~LL~~GADIN~~d~~G~TPLh~  541 (764)
T PHA02716        464 YTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVM--DSFVYLLSIQYNINIPTKNGVTPLML  541 (764)
T ss_pred             hhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhH--HHHHHHHhCCCCCcccCCCCCCHHHH
Confidence                                   01235568899999999999876520000  223555  789999999999999999


Q ss_pred             hHHHH
Q 037666          202 FSEKH  206 (375)
Q Consensus       202 a~~~~  206 (375)
                      |.+++
T Consensus       542 A~~~g  546 (764)
T PHA02716        542 TMRNN  546 (764)
T ss_pred             HHHcC
Confidence            99755

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.96  E-value=3.1e-28  Score=240.04  Aligned_cols=192  Identities=14%  Similarity=0.081  Sum_probs=103.3

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHc---CCHHHHHHHHHcCChhhH-hchhcCCChHHHHHHHc--CcHHHHHHH
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQA---NCIDFVKELLKMMSTEDL-AKKNKIGCTAFFYAAGS--GMVEIVEEA   76 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~-~~~d~~g~tpLh~Aa~~--g~~~iv~~L   76 (375)
                      ++++|.++|+++|.+ |.+|.||||.|+..   |+.+++++|+++  |+++ +.+|..|+||||+|+..  ++.+++++|
T Consensus        90 iv~~Ll~~Gadin~~-d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~--Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~L  166 (494)
T PHA02989         90 IVKLLLKFGADINLK-TFNGVSPIVCFIYNSNINNCDMLRFLLSK--GINVNDVKNSRGYNLLHMYLESFSVKKDVIKIL  166 (494)
T ss_pred             HHHHHHHCCCCCCCC-CCCCCcHHHHHHHhcccCcHHHHHHHHHC--CCCcccccCCCCCCHHHHHHHhccCCHHHHHHH
Confidence            344444444444444 44444444444332   334444444444  4444 34444444444444332  344444444


Q ss_pred             HccCCCCccccCCCCChHHHHHHHcC----cHHHHHHHHHhcc-CCcccchhhHHHHHHHhcC------cHHHHHHHHhc
Q 037666           77 MKGNKDIAMVPGGDGTLPIVRAAALG----QRQTVVLLYEKTK-GSLTDDECIELLVKLIETD------LYAVALRLLKD  145 (375)
Q Consensus        77 l~~~~~~~~~~d~~g~tpLh~Aa~~g----~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~------~~~~v~~LL~~  145 (375)
                      ++.|+++....|..|.||||.|++.+    +.+++++|+++|. ++.+|..+.|+||.++..+      ..+++++++. 
T Consensus       167 l~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-  245 (494)
T PHA02989        167 LSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-  245 (494)
T ss_pred             HHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-
Confidence            44444431113444444444444332    4444444444444 4444444444444433321      2233333222 


Q ss_pred             CCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          146 RPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       146 ~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                       +.++|.+|.+|+||||+|++.++.       ++.++|  .|++++.+|.+|.||+++|.+..
T Consensus       246 -~advn~~d~~G~TpL~~Aa~~~~~-------~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~  300 (494)
T PHA02989        246 -YIKINKKDKKGFNPLLISAKVDNY-------EAFNYLLKLGDDIYNVSKDGDTVLTYAIKHG  300 (494)
T ss_pred             -CCCCCCCCCCCCCHHHHHHHhcCH-------HHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence             355677788899999999998877       777766  78899999999999999987654

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.96  E-value=4.2e-28  Score=238.32  Aligned_cols=185  Identities=15%  Similarity=0.116  Sum_probs=159.6

Q ss_pred             HHHHHHhhCccccccccCCC-CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccC
Q 037666            2 VAKDIYDKYEDEIGQEITNL-GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGN   80 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~-g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~   80 (375)
                      ++.++|.++|++++.. |.. |+||||+|+..|+.++++.|+++  +++++.+|..|+||||+|++.|+.++++.|++.|
T Consensus       148 ~iv~~Ll~~gadin~~-~~~~g~tpLh~A~~~~~~~iv~~Ll~~--gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g  224 (477)
T PHA02878        148 EITKLLLSYGADINMK-DRHKGNTALHYATENKDQRLTELLLSY--GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENG  224 (477)
T ss_pred             HHHHHHHHcCCCCCcc-CCCCCCCHHHHHHhCCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence            3788999999999998 777 99999999999999999999999  8999999999999999999999999999999999


Q ss_pred             CCCccccCCCCChHHHHHHHc-CcHHHHHHHHHhcc-CCcccc-hhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCC
Q 037666           81 KDIAMVPGGDGTLPIVRAAAL-GQRQTVVLLYEKTK-GSLTDD-ECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNE  157 (375)
Q Consensus        81 ~~~~~~~d~~g~tpLh~Aa~~-g~~~iv~~Ll~~~~-~~~~d~-~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G  157 (375)
                      +++ +.+|..|.||||+|+.. ++.+++++|+++|+ ++.++. .|.||||.|  .++.++++.|++. |+++|.+|.+|
T Consensus       225 a~i-n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~-gadin~~d~~g  300 (477)
T PHA02878        225 AST-DARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEY-GADINSLNSYK  300 (477)
T ss_pred             CCC-CCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHC-CCCCCCcCCCC
Confidence            996 88999999999999976 78999999999999 777665 799999999  4568899999988 99999999999


Q ss_pred             CcHHHHHHHhcCCCCCCCccchhhcc-------chhhHhhhcCCCCChh
Q 037666          158 ETALHVLARKNLTSSNQNPCGVENVV-------PKKLAEAINTGGLTPT  199 (375)
Q Consensus       158 ~T~Lh~A~~~~~~~~~~~~~~v~~~L-------~~~~~~~~n~~g~tpl  199 (375)
                      +||||+|++.+...      ++.+++       ...+.+.++.+|..+-
T Consensus       301 ~TpL~~A~~~~~~~------~~~~~li~~~~~~~~~~~~~~~~~g~~~n  343 (477)
T PHA02878        301 LTPLSSAVKQYLCI------NIGRILISNICLLKRIKPDIKNSEGFIDN  343 (477)
T ss_pred             CCHHHHHHHHcCcc------chHHHHHHHHHHHHhccCcccCcHHHHHH
Confidence            99999999864321      444444       1234455566665543

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.96  E-value=4.2e-28  Score=248.24  Aligned_cols=193  Identities=13%  Similarity=0.047  Sum_probs=144.3

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.++|.++|+++|.+ |..|.||||+|+..|+.++|++|+++  |++++..+.+|.||||+|+..|+.++++.|++.++
T Consensus       159 ~i~k~Ll~~Gadvn~~-d~~G~TpLh~Aa~~G~~~iv~~LL~~--Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~  235 (682)
T PHA02876        159 LIAEMLLEGGADVNAK-DIYCITPIHYAAERGNAKMVNLLLSY--GADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRS  235 (682)
T ss_pred             HHHHHHHhCCCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHHC--CCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence            4678999999999998 99999999999999999999999999  88888888888888888888888777777665443


Q ss_pred             CC----------------------------ccccCCCCChHHHHHHHcCcH-HHHHHHHHhcc-CCcccchhhHHHHHHH
Q 037666           82 DI----------------------------AMVPGGDGTLPIVRAAALGQR-QTVVLLYEKTK-GSLTDDECIELLVKLI  131 (375)
Q Consensus        82 ~~----------------------------~~~~d~~g~tpLh~Aa~~g~~-~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~  131 (375)
                      +.                            .+..|..|.||||+|+..|+. +++++|++.+. ++.+|.+|+||||+|+
T Consensus       236 ~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa  315 (682)
T PHA02876        236 NINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMA  315 (682)
T ss_pred             CCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence            21                            144566778888888887775 57777777777 6777777888888888


Q ss_pred             hcC-cHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHH
Q 037666          132 ETD-LYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSE  204 (375)
Q Consensus       132 ~~~-~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~  204 (375)
                      .+| ..+.++.|+.. |.+++.+|..|+||||+|+..+...      ++.++|  .+++++.+|..|+||+++|+.
T Consensus       316 ~~g~~~~~v~~Ll~~-gadin~~d~~g~TpLh~A~~~~~~~------~iv~lLl~~gadin~~d~~G~TpLh~Aa~  384 (682)
T PHA02876        316 KNGYDTENIRTLIML-GADVNAADRLYITPLHQASTLDRNK------DIVITLLELGANVNARDYCDKTPIHYAAV  384 (682)
T ss_pred             HhCCCHHHHHHHHHc-CCCCCCcccCCCcHHHHHHHhCCcH------HHHHHHHHcCCCCccCCCCCCCHHHHHHH
Confidence            777 46666666665 7777777777777777777654221      444444  556666666666666666654

>PHA02946 ankyin-like protein; Provisional

Probab=99.95  E-value=7.1e-28  Score=233.14  Aligned_cols=162  Identities=12%  Similarity=0.086  Sum_probs=145.7

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCC--HHHHHHHHHcCChhhHhc-hhcCCChHHHHHHHcCcHHHHHHHHc
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANC--IDFVKELLKMMSTEDLAK-KNKIGCTAFFYAAGSGMVEIVEEAMK   78 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~--~~~v~~Ll~~~~~~~~~~-~d~~g~tpLh~Aa~~g~~~iv~~Ll~   78 (375)
                      +++++|+++|+++|.+ |.+|+||||+|+..++  .++++.|+++  +++++. .|.+|.|||| |+..|+.++++.|++
T Consensus        86 eiv~lLL~~GAdin~~-d~~g~TpLh~A~~~~~~~~e~v~lLl~~--Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~  161 (446)
T PHA02946         86 RIVAMLLTHGADPNAC-DKQHKTPLYYLSGTDDEVIERINLLVQY--GAKINNSVDEEGCGPLL-ACTDPSERVFKKIMS  161 (446)
T ss_pred             HHHHHHHHCcCCCCCC-CCCCCCHHHHHHHcCCchHHHHHHHHHc--CCCcccccCCCCCcHHH-HHHCCChHHHHHHHh
Confidence            5788999999999987 9999999999998764  8999999999  899885 6899999998 677799999999999


Q ss_pred             cCCCCccccCCCCChHHHHHHHcC--cHHHHHHHHHhcc-CCcccchhhHHHHHHHhcC--cHHHHHHHHhcCCcccccc
Q 037666           79 GNKDIAMVPGGDGTLPIVRAAALG--QRQTVVLLYEKTK-GSLTDDECIELLVKLIETD--LYAVALRLLKDRPQLATKR  153 (375)
Q Consensus        79 ~~~~~~~~~d~~g~tpLh~Aa~~g--~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~--~~~~v~~LL~~~~~~~~~~  153 (375)
                      .+.+. +.+|..|+||||+|+..+  +.+++++|++.++ ++.+|.+|+||||+|+.++  +.++++.|+.  +.++|.+
T Consensus       162 ~gad~-~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~--gadin~~  238 (446)
T PHA02946        162 IGFEA-RIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP--STDVNKQ  238 (446)
T ss_pred             ccccc-cccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc--CCCCCCC
Confidence            99996 889999999999988755  4689999999999 8889999999999999976  7888888774  7999999


Q ss_pred             cCCCCcHHHHHHHhcCC
Q 037666          154 DRNEETALHVLARKNLT  170 (375)
Q Consensus       154 d~~G~T~Lh~A~~~~~~  170 (375)
                      |.+|+||||+|++.+..
T Consensus       239 d~~G~TpLh~A~~~~~~  255 (446)
T PHA02946        239 NKFGDSPLTLLIKTLSP  255 (446)
T ss_pred             CCCCCCHHHHHHHhCCh
Confidence            99999999999998753

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.95  E-value=5.6e-28  Score=247.27  Aligned_cols=192  Identities=19%  Similarity=0.103  Sum_probs=132.2

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCH-HHHHHHHHcCChhhHhchhcCCChHHHHHHHcC-cHHHHHHHHccC
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCI-DFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG-MVEIVEEAMKGN   80 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~-~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g-~~~iv~~Ll~~~   80 (375)
                      +.++|.+.|++++.. |..|+||||+|+..|+. ++++.|++.  +++++.+|.+|.||||+|+..| +.++++.|++.+
T Consensus       255 ~~~~Ll~~g~~vn~~-d~~g~TpLh~Aa~~~~~~~iv~lLl~~--gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~g  331 (682)
T PHA02876        255 TSLLLYDAGFSVNSI-DDCKNTPLHHASQAPSLSRLVPKLLER--GADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLG  331 (682)
T ss_pred             HHHHHHHCCCCCCCC-CCCCCCHHHHHHhCCCHHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcC
Confidence            456666777777765 66777777777777774 467777776  6777777777777777777777 467777777777


Q ss_pred             CCCccccCCCCChHHHHHHHc-CcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCC
Q 037666           81 KDIAMVPGGDGTLPIVRAAAL-GQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEE  158 (375)
Q Consensus        81 ~~~~~~~d~~g~tpLh~Aa~~-g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~  158 (375)
                      .+. +.+|..|.||||+|+.. ++.++++.|++.+. ++.+|..|+||||+|+.+++.++++.|++. |.+++..|.+|.
T Consensus       332 adi-n~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~-gad~~~~~~~g~  409 (682)
T PHA02876        332 ADV-NAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDY-GADIEALSQKIG  409 (682)
T ss_pred             CCC-CCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCccccCCCCC
Confidence            765 66677777777777764 35666777777766 666777777777777777777777777766 667777777777


Q ss_pred             cHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          159 TALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       159 T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      ||||+|+..+...      .+.++|  .+++++.+|.+|+||+++|++.
T Consensus       410 T~Lh~A~~~~~~~------~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~  452 (682)
T PHA02876        410 TALHFALCGTNPY------MSVKTLIDRGANVNSKNKDLSTPLHYACKK  452 (682)
T ss_pred             chHHHHHHcCCHH------HHHHHHHhCCCCCCcCCCCCChHHHHHHHh
Confidence            7777776654321      333433  5666777777777777777654

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.95  E-value=4.8e-28  Score=233.46  Aligned_cols=196  Identities=21%  Similarity=0.216  Sum_probs=150.2

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC------------------------------------C
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMM------------------------------------S   46 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~------------------------------------~   46 (375)
                      +.++|.++|+|+|.. |+.|.||||.||..++.|..+.|++..                                    .
T Consensus       136 ~L~~Ll~~~~dvnl~-de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r  214 (929)
T KOG0510|consen  136 CLKLLLDYGADVNLE-DENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYER  214 (929)
T ss_pred             HHHHHHHhcCCcccc-ccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchh
Confidence            445566666777765 666777777777777766556666552                                    0


Q ss_pred             hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCC--------------ccccCCCCChHHHHHHHcCcHHHHHHHHH
Q 037666           47 TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDI--------------AMVPGGDGTLPIVRAAALGQRQTVVLLYE  112 (375)
Q Consensus        47 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~--------------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~  112 (375)
                      ...+|..|..|.||||.|+..|+.++++.+++.+...              .+..|++|.||||+|++.|+.+.++.|+.
T Consensus       215 ~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~  294 (929)
T KOG0510|consen  215 QTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLG  294 (929)
T ss_pred             hcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHH
Confidence            2335556666777777777777777777777765432              24568889999999999999999999999


Q ss_pred             hcc-CCcccchhhHHHHHHHhcCcHHHHHHHHh-cCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhH
Q 037666          113 KTK-GSLTDDECIELLVKLIETDLYAVALRLLK-DRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLA  188 (375)
Q Consensus       113 ~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~-~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~  188 (375)
                      .|+ ++.++.++.||||.|+..|+.+.++.||+ ..-.+.|..|..|+||||+|++.|+.       .+.++|  .|+..
T Consensus       295 ~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~-------~v~qlLl~~GA~~  367 (929)
T KOG0510|consen  295 FGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHD-------RVVQLLLNKGALF  367 (929)
T ss_pred             cCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHH-------HHHHHHHhcChhh
Confidence            998 88888999999999999999999999998 55677888999999999999988877       788877  55554


Q ss_pred             h---hhcCCCCChhhhhHHHH
Q 037666          189 E---AINTGGLTPTALFSEKH  206 (375)
Q Consensus       189 ~---~~n~~g~tpl~~a~~~~  206 (375)
                      .   ..|.+|.||+|.|+...
T Consensus       368 ~~~~e~D~dg~TaLH~Aa~~g  388 (929)
T KOG0510|consen  368 LNMSEADSDGNTALHLAAKYG  388 (929)
T ss_pred             hcccccccCCchhhhHHHHhc
Confidence            4   34899999999988654

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.95  E-value=1.4e-27  Score=226.13  Aligned_cols=162  Identities=23%  Similarity=0.183  Sum_probs=151.4

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.++|+++|+++|..-..-|.||||+|+++|+..+|+.|+++  |++++.+|.+|.||||.|++.|+.-++-+|+.++.
T Consensus        92 ~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqh--GAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~  169 (600)
T KOG0509|consen   92 DVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQH--GADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGA  169 (600)
T ss_pred             HHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHc--CCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcc
Confidence            4789999999999998447789999999999999999999999  99999999999999999999999999999999998


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCccc-chhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTD-DECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEET  159 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d-~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T  159 (375)
                      +. +.+|.+|+||||+|+.+|....++.|+..++ +...| ..|+||||+|+..|+..++. |+.+.+.+.+.+|.+|.|
T Consensus       170 d~-d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g~~~~d~~~~~g~t  247 (600)
T KOG0509|consen  170 DI-DLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVK-LLLEGGADLDKTNTNGKT  247 (600)
T ss_pred             cC-CCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEe-hhhhcCCcccccccCCCC
Confidence            86 9999999999999999999988999999999 66655 89999999999999999999 776668999999999999


Q ss_pred             HHHHHHHh
Q 037666          160 ALHVLARK  167 (375)
Q Consensus       160 ~Lh~A~~~  167 (375)
                      |+.+|.++
T Consensus       248 p~~LA~~~  255 (600)
T KOG0509|consen  248 PFDLAQER  255 (600)
T ss_pred             HHHHHHHh
Confidence            99999877

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.94  E-value=1.3e-26  Score=228.62  Aligned_cols=197  Identities=18%  Similarity=0.116  Sum_probs=99.1

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHc--CCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcC------cHHHHH
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQA--NCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG------MVEIVE   74 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~--g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g------~~~iv~   74 (375)
                      ++++|.++|+++|..  .+|.||||.++..  ++.++|+.|+++  |+++|.++ .|.||||.|+..+      +.++++
T Consensus        18 ~v~~LL~~GadvN~~--~~g~t~l~~~~~~~~~~~~iv~~Ll~~--GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~   92 (494)
T PHA02989         18 ALEFLLRTGFDVNEE--YRGNSILLLYLKRKDVKIKIVKLLIDN--GADVNYKG-YIETPLCAVLRNREITSNKIKKIVK   92 (494)
T ss_pred             HHHHHHHcCCCcccc--cCCCCHHHHHHhcCCCChHHHHHHHHc--CCCccCCC-CCCCcHHHHHhccCcchhhHHHHHH
Confidence            444455555555544  2355555433322  235555555555  45555443 3455555554332      344555


Q ss_pred             HHHccCCCCccccCCCCChHHHHHHHc---CcHHHHHHHHHhcc-C-CcccchhhHHHHHHHhc--CcHHHHHHHHhcCC
Q 037666           75 EAMKGNKDIAMVPGGDGTLPIVRAAAL---GQRQTVVLLYEKTK-G-SLTDDECIELLVKLIET--DLYAVALRLLKDRP  147 (375)
Q Consensus        75 ~Ll~~~~~~~~~~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~-~-~~~d~~g~t~Lh~A~~~--~~~~~v~~LL~~~~  147 (375)
                      +|++.|+++ +.+|.+|.||||.|+..   |+.+++++|+++|+ + +.+|..|+||||+|+..  ++.++++.|+++ |
T Consensus        93 ~Ll~~Gadi-n~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~-G  170 (494)
T PHA02989         93 LLLKFGADI-NLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF-G  170 (494)
T ss_pred             HHHHCCCCC-CCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc-C
Confidence            555555553 44555555555554433   34455555555555 4 44555555555554432  344555555554 4


Q ss_pred             ccccc-ccCCCCcHHHHHHHhcCCC------------CCCC-----------c-------------cchhhcc-chhhHh
Q 037666          148 QLATK-RDRNEETALHVLARKNLTS------------SNQN-----------P-------------CGVENVV-PKKLAE  189 (375)
Q Consensus       148 ~~~~~-~d~~G~T~Lh~A~~~~~~~------------~~~~-----------~-------------~~v~~~L-~~~~~~  189 (375)
                      .+++. .|..|.||||+|++.+...            +..+           |             .++.+++ .+++++
T Consensus       171 adi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn  250 (494)
T PHA02989        171 VNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKIN  250 (494)
T ss_pred             CCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCC
Confidence            55544 3445555555544332100            0000           0             0233333 567888


Q ss_pred             hhcCCCCChhhhhHHHH
Q 037666          190 AINTGGLTPTALFSEKH  206 (375)
Q Consensus       190 ~~n~~g~tpl~~a~~~~  206 (375)
                      .+|.+|+||+++|+...
T Consensus       251 ~~d~~G~TpL~~Aa~~~  267 (494)
T PHA02989        251 KKDKKGFNPLLISAKVD  267 (494)
T ss_pred             CCCCCCCCHHHHHHHhc
Confidence            99999999999988653

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.94  E-value=2.6e-26  Score=200.50  Aligned_cols=158  Identities=12%  Similarity=0.058  Sum_probs=138.5

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcC--CHHHHHHHHHcCChhhHhchh-cCCChHHHHHHHc---CcHHHHHHH
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQAN--CIDFVKELLKMMSTEDLAKKN-KIGCTAFFYAAGS---GMVEIVEEA   76 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~~~~~~~~~~d-~~g~tpLh~Aa~~---g~~~iv~~L   76 (375)
                      +++.|.+.   ++.. |..|.||||+|+..+  +.++++.|+++  +++++.++ ..|.||||+|+..   ++.+++++|
T Consensus        36 ~vk~Li~~---~n~~-~~~g~TpLh~a~~~~~~~~eiv~~Ll~~--gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~L  109 (209)
T PHA02859         36 GVKKWIKF---VNDC-NDLYETPIFSCLEKDKVNVEILKFLIEN--GADVNFKTRDNNLSALHHYLSFNKNVEPEILKIL  109 (209)
T ss_pred             HHHHHHHh---hhcc-CccCCCHHHHHHHcCCCCHHHHHHHHHC--CCCCCccCCCCCCCHHHHHHHhCccccHHHHHHH
Confidence            34455543   4555 889999999999865  89999999999  89999997 4899999998763   579999999


Q ss_pred             HccCCCCccccCCCCChHHHHHHH--cCcHHHHHHHHHhcc-CCcccchhhHHHHH-HHhcCcHHHHHHHHhcCCccccc
Q 037666           77 MKGNKDIAMVPGGDGTLPIVRAAA--LGQRQTVVLLYEKTK-GSLTDDECIELLVK-LIETDLYAVALRLLKDRPQLATK  152 (375)
Q Consensus        77 l~~~~~~~~~~d~~g~tpLh~Aa~--~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~-A~~~~~~~~v~~LL~~~~~~~~~  152 (375)
                      +++++++ +.+|.+|.||||+|+.  .++.+++++|++.+. ++.+|.+|+||||. |+.+++.++++.|++. |.+++.
T Consensus       110 l~~gadi-n~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~-Gadi~~  187 (209)
T PHA02859        110 IDSGSSI-TEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSL-GIDINE  187 (209)
T ss_pred             HHCCCCC-CCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHc-CCCCCC
Confidence            9999997 8899999999999886  468999999999998 88899999999995 5678899999999987 999999


Q ss_pred             ccCCCCcHHHHHHHhc
Q 037666          153 RDRNEETALHVLARKN  168 (375)
Q Consensus       153 ~d~~G~T~Lh~A~~~~  168 (375)
                      +|..|.||||+|..++
T Consensus       188 ~d~~g~tpl~la~~~~  203 (209)
T PHA02859        188 TNKSGYNCYDLIKFRN  203 (209)
T ss_pred             CCCCCCCHHHHHhhhh
Confidence            9999999999998774

>PHA02798 ankyrin-like protein; Provisional

Probab=99.94  E-value=1.6e-26  Score=227.55  Aligned_cols=170  Identities=13%  Similarity=0.029  Sum_probs=151.0

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcC---CHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCc---HHHHHH
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQAN---CIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGM---VEIVEE   75 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g---~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~---~~iv~~   75 (375)
                      ++.++|.++|+++|.+ |.+|+||||+|+..|   +.+++++|+++  |++++.+|.+|.||||+|++.|+   .+++++
T Consensus        90 ~iv~~Ll~~GadiN~~-d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~--Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~  166 (489)
T PHA02798         90 DIVKILIENGADINKK-NSDGETPLYCLLSNGYINNLEILLFMIEN--GADTTLLDKDGFTMLQVYLQSNHHIDIEIIKL  166 (489)
T ss_pred             HHHHHHHHCCCCCCCC-CCCcCcHHHHHHHcCCcChHHHHHHHHHc--CCCccccCCCCCcHHHHHHHcCCcchHHHHHH
Confidence            5788999999999998 999999999999986   78999999999  89999999999999999999998   999999


Q ss_pred             HHccCCCCcccc-CCCCChHHHHHHHc----CcHHHHHHHHHhcc-C---------------------------------
Q 037666           76 AMKGNKDIAMVP-GGDGTLPIVRAAAL----GQRQTVVLLYEKTK-G---------------------------------  116 (375)
Q Consensus        76 Ll~~~~~~~~~~-d~~g~tpLh~Aa~~----g~~~iv~~Ll~~~~-~---------------------------------  116 (375)
                      |++.|+++ +.+ +..|.||||.++..    ++.+++++|+++|. +                                 
T Consensus       167 Ll~~gadi-n~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l  245 (489)
T PHA02798        167 LLEKGVDI-NTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFI  245 (489)
T ss_pred             HHHhCCCc-ccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHH
Confidence            99999997 555 56799999998765    47889999988765 2                                 


Q ss_pred             ------CcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          117 ------SLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       117 ------~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                            +.+|..|+||||.|+..++.+++++|++. |+++|.+|.+|+||||+|++.+..       ++.+.+
T Consensus       246 ~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~-GAdin~~d~~G~TpL~~A~~~~~~-------~iv~~l  310 (489)
T PHA02798        246 FSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQL-GGDINIITELGNTCLFTAFENESK-------FIFNSI  310 (489)
T ss_pred             HhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHc-CCcccccCCCCCcHHHHHHHcCcH-------HHHHHH
Confidence                  22566799999999999999999999998 999999999999999999999876       666555

>PF13962 PGG: Domain of unknown function

Probab=99.94  E-value=1.8e-26  Score=180.54  Aligned_cols=109  Identities=41%  Similarity=0.708  Sum_probs=96.8

Q ss_pred             hHHhHhhhhhhHHHHHHHHHHHhHhhhccCCCCCCC---CCccccccCc-ceeehhhHHHHHHHHHHHHHHHHHHhcccc
Q 037666          214 ETWMKDTASSCMIVATLIATIVFAAAITVPGGNKED---TGLPFFRQKA-SFKIFAVSNVISLVASSVSIVNFLSIVAPR  289 (375)
Q Consensus       214 ~~~~~~~~~~~~vva~Liatv~faa~~t~PGG~~~~---~G~~~~~~~~-~f~~F~~~~~~a~~~s~~~~~~~~~~~~~~  289 (375)
                      +||++++++++++||+|||||||+|++|||||++||   .|+|++.+++ .|++|+++|++||++|+.+++++++.+   
T Consensus         1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~---   77 (113)
T PF13962_consen    1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGL---   77 (113)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHh---
Confidence            478999999999999999999999999999999876   6999998888 999999999999999999998777432   


Q ss_pred             chhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhee
Q 037666          290 YAEEDFLHLLPRKLLVGFATLFVAIAAMMVVFSATSYIV  328 (375)
Q Consensus       290 ~~~~~~~~~l~~~l~~~~~~l~~s~~~m~~af~~~~~~v  328 (375)
                         .++.+..++.+.++..++++++.+|++||++|+|+|
T Consensus        78 ---~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v  113 (113)
T PF13962_consen   78 ---DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV  113 (113)
T ss_pred             ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence               334455566778889999999999999999999976

>PHA02917 ankyrin-like protein; Provisional

Probab=99.94  E-value=2.5e-26  Score=230.74  Aligned_cols=198  Identities=15%  Similarity=0.066  Sum_probs=157.7

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHc---CCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHH----HHH
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQA---NCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVE----IVE   74 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~----iv~   74 (375)
                      ++++++. ++..++.. |.+|+||||+|+..   |+.++|+.|++.  |++++.+|..|+||||+|+..|+.+    +++
T Consensus        14 ~~~~l~~-~~~~~~~~-d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~--ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~   89 (661)
T PHA02917         14 ELKQMLR-DRDPNDTR-NQFKNNALHAYLFNEHCNNVEVVKLLLDS--GTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAM   89 (661)
T ss_pred             HHHHHHh-ccCccccc-CCCCCcHHHHHHHhhhcCcHHHHHHHHHC--CCCccccCCCCCCHHHHHHHcCChhHHHHHHH
Confidence            4556664 77777776 99999999998665   889999999999  8999999999999999999999854    557


Q ss_pred             HHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHH--HhcCcHHHHHHHHhcCCcccc
Q 037666           75 EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKL--IETDLYAVALRLLKDRPQLAT  151 (375)
Q Consensus        75 ~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A--~~~~~~~~v~~LL~~~~~~~~  151 (375)
                      .|++.+... +..|  ..+++|+|+.+|+.+++++|+++|+ ++.+|.+|+||||.+  +.+|+.++++.|+++ |+++|
T Consensus        90 ~Ll~~~~~~-n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~-Ga~vn  165 (661)
T PHA02917         90 ALLEATGYS-NIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIEN-GCSVL  165 (661)
T ss_pred             HHHhccCCC-CCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHc-CCCcc
Confidence            777764432 3322  3477888999999999999999999 999999999999954  457899999999998 99998


Q ss_pred             cccCC---C-----------CcHHHHHHHhcCCCCC----CCccchhhcc--chhhHhhhcCCCCChhhhhHHHHH
Q 037666          152 KRDRN---E-----------ETALHVLARKNLTSSN----QNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHK  207 (375)
Q Consensus       152 ~~d~~---G-----------~T~Lh~A~~~~~~~~~----~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~  207 (375)
                      .+|.+   |           .||||+|+..+..+..    .-|.+++++|  +|++++.+|.+|.||+++|.+...
T Consensus       166 ~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~  241 (661)
T PHA02917        166 YEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSH  241 (661)
T ss_pred             ccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCC
Confidence            76543   4           5999999863210000    0012777777  789999999999999999987653

>PHA02795 ankyrin-like protein; Provisional

Probab=99.94  E-value=3e-26  Score=215.57  Aligned_cols=183  Identities=11%  Similarity=-0.068  Sum_probs=155.4

Q ss_pred             HHHHHHhhCccccc------cccCCCCCcHHHHHHH--cCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHH
Q 037666            2 VAKDIYDKYEDEIG------QEITNLGNTALHVAAQ--ANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIV   73 (375)
Q Consensus         2 ~v~~lL~~~~~~~~------~~~d~~g~tpLh~A~~--~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv   73 (375)
                      ++.++|+.+|++++      .+ +.+++|+||+|+.  .|+.|+|++|+++  |++++..  ++.||+|.|+..|+.+++
T Consensus        91 ~~~~~l~s~~~~~~~~~~~~~~-~~~~~~~L~~~~~n~~n~~eiV~~LI~~--GADIn~~--~~~t~lh~A~~~~~~eIV  165 (437)
T PHA02795         91 DIISALVSKNYMEDIFSIIIKN-CNSVQDLLLYYLSNAYVEIDIVDFMVDH--GAVIYKI--ECLNAYFRGICKKESSVV  165 (437)
T ss_pred             HHHHHHHhcccccchhhhhhhc-cccccHHHHHHHHhcCCCHHHHHHHHHC--CCCCCCC--CCCCHHHHHHHcCcHHHH
Confidence            57889999999988      65 7889999999999  8999999999999  8999874  468999999999999999


Q ss_pred             HHHHccCCCCcccc-----CCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCC
Q 037666           74 EEAMKGNKDIAMVP-----GGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRP  147 (375)
Q Consensus        74 ~~Ll~~~~~~~~~~-----d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~  147 (375)
                      ++|+++|++..+..     +..|.+|+|.|+..++.+++++|+++++ ++.+|.+|+||||+|+.+|+.++++.|++. |
T Consensus       166 k~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~-G  244 (437)
T PHA02795        166 EFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLEN-G  244 (437)
T ss_pred             HHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHC-C
Confidence            99999997532322     2347899999999999999999999999 999999999999999999999999999988 9


Q ss_pred             cccccccCCCCcHHHHHHHhcCCC-CCCCccchhhcc--chhhHhh
Q 037666          148 QLATKRDRNEETALHVLARKNLTS-SNQNPCGVENVV--PKKLAEA  190 (375)
Q Consensus       148 ~~~~~~d~~G~T~Lh~A~~~~~~~-~~~~~~~v~~~L--~~~~~~~  190 (375)
                      +++|.+|.+|+||||+|+..|... ...-|.++.++|  ++++++.
T Consensus       245 AdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~  290 (437)
T PHA02795        245 ANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDC  290 (437)
T ss_pred             CCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCc
Confidence            999999999999999999988421 001122566766  4444443

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.93  E-value=1.4e-25  Score=233.01  Aligned_cols=174  Identities=19%  Similarity=0.192  Sum_probs=159.5

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      ++++.++||.||..|+.++++.|++.  +.++|..|.+|+||||+|+..|+.++++.|++.++++ +.+|.+|.||||.|
T Consensus       522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~--G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadi-n~~d~~G~TpL~~A  598 (823)
T PLN03192        522 DPNMASNLLTVASTGNAALLEELLKA--KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNV-HIRDANGNTALWNA  598 (823)
T ss_pred             CccchhHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCC-CCcCCCCCCHHHHH
Confidence            55678999999999999999999999  8999999999999999999999999999999999996 88999999999999


Q ss_pred             HHcCcHHHHHHHHHhccCCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccc
Q 037666           99 AALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCG  178 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~  178 (375)
                      +..|+.+++++|++.+. ......|.++||.|+.+|+.++++.|+++ |.++|.+|.+|+||||+|++.|+.       +
T Consensus       599 ~~~g~~~iv~~L~~~~~-~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~-Gadin~~d~~G~TpLh~A~~~g~~-------~  669 (823)
T PLN03192        599 ISAKHHKIFRILYHFAS-ISDPHAAGDLLCTAAKRNDLTAMKELLKQ-GLNVDSEDHQGATALQVAMAEDHV-------D  669 (823)
T ss_pred             HHhCCHHHHHHHHhcCc-ccCcccCchHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCcH-------H
Confidence            99999999999998776 22235577999999999999999999988 999999999999999999999988       8


Q ss_pred             hhhcc--chhhHhhhcCCC-CChhhhhHH
Q 037666          179 VENVV--PKKLAEAINTGG-LTPTALFSE  204 (375)
Q Consensus       179 v~~~L--~~~~~~~~n~~g-~tpl~~a~~  204 (375)
                      +.++|  ++++++..|.+| .||.+++..
T Consensus       670 iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        670 MVRLLIMNGADVDKANTDDDFSPTELREL  698 (823)
T ss_pred             HHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence            88887  789999999988 899987644

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.92  E-value=4.7e-26  Score=207.68  Aligned_cols=176  Identities=19%  Similarity=0.215  Sum_probs=154.2

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhc--------hhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCC
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAK--------KNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGD   90 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~--------~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~   90 (375)
                      +.+|.|||-+||++||.++|++|+++. ++++..        ...+|-+||..|+..||.++||.|+++++++ +.....
T Consensus        39 ~~~g~tPL~iaaRnGH~~vVeyLle~~-~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~V-N~tT~T  116 (615)
T KOG0508|consen   39 VQNGGTPLLIAARNGHADVVEYLLEHC-RASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASV-NDTTRT  116 (615)
T ss_pred             ccCCCCceeeehhcCcHHHHHHHHHHh-cCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcc-cccccc
Confidence            578999999999999999999999975 554432        2346889999999999999999999999887 666677


Q ss_pred             CChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcC
Q 037666           91 GTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNL  169 (375)
Q Consensus        91 g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~  169 (375)
                      +.|||--||..|+.+++++|+++++ .++.|..|.|.||+|+.+|+.+++++|++. |.++|.++..|||+||.+++.|+
T Consensus       117 NStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~-gADvn~ks~kGNTALH~caEsG~  195 (615)
T KOG0508|consen  117 NSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQ-GADVNAKSYKGNTALHDCAESGS  195 (615)
T ss_pred             CCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHh-CCCcchhcccCchHHHhhhhccc
Confidence            7899999999999999999999999 899999999999999999999999999999 99999999999999999999998


Q ss_pred             CCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          170 TSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       170 ~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      .       ++.++|  +++.+ .+|..|.||+..|...
T Consensus       196 v-------divq~Ll~~ga~i-~~d~~GmtPL~~Aa~t  225 (615)
T KOG0508|consen  196 V-------DIVQLLLKHGAKI-DVDGHGMTPLLLAAVT  225 (615)
T ss_pred             H-------HHHHHHHhCCcee-eecCCCCchHHHHhhh
Confidence            8       888877  44444 4567799999987643

>PHA02730 ankyrin-like protein; Provisional

Probab=99.92  E-value=1e-24  Score=214.59  Aligned_cols=191  Identities=13%  Similarity=-0.002  Sum_probs=159.4

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHH--HHHcCCHHHHHHHHH--------------------------------cCCh
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHV--AAQANCIDFVKELLK--------------------------------MMST   47 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~--A~~~g~~~~v~~Ll~--------------------------------~~~~   47 (375)
                      +++++|+++|+++|.+ |.+|+||||+  |+..|+.|+|+.|++                                +  |
T Consensus       216 eiv~lLIs~GadIN~k-d~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  292 (672)
T PHA02730        216 DVIKCLIDNNVSIHGR-DEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPY--N  292 (672)
T ss_pred             HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccC--C
Confidence            6889999999999998 9999999995  556678999999999                                3  5


Q ss_pred             hhHhc--------------------hhcCCCh---------------------HHHHHHHcC---cHHHHHHHHccCCCC
Q 037666           48 EDLAK--------------------KNKIGCT---------------------AFFYAAGSG---MVEIVEEAMKGNKDI   83 (375)
Q Consensus        48 ~~~~~--------------------~d~~g~t---------------------pLh~Aa~~g---~~~iv~~Ll~~~~~~   83 (375)
                      .|...                    .|..|.+                     .||.-.+.|   +.+++++|+++|+++
T Consensus       293 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdI  372 (672)
T PHA02730        293 VDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATM  372 (672)
T ss_pred             cchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCC
Confidence            55544                    5666755                     677777755   589999999999997


Q ss_pred             ccccCCCCChHHHHHHHcCc----HHHHHHHHHhcc---CCcccchhhHHHHH---HHhcC---------cHHHHHHHHh
Q 037666           84 AMVPGGDGTLPIVRAAALGQ----RQTVVLLYEKTK---GSLTDDECIELLVK---LIETD---------LYAVALRLLK  144 (375)
Q Consensus        84 ~~~~d~~g~tpLh~Aa~~g~----~~iv~~Ll~~~~---~~~~d~~g~t~Lh~---A~~~~---------~~~~v~~LL~  144 (375)
                       +.. ..|.||||+|+..++    .+++++|+++|+   ++.+|.+|+||||.   |...+         ..++++.|+.
T Consensus       373 -N~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs  450 (672)
T PHA02730        373 -DKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSK  450 (672)
T ss_pred             -CcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHh
Confidence             554 789999999998885    899999999986   56688999999994   33332         2356888888


Q ss_pred             cCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcC-CCCChhhhhHHH
Q 037666          145 DRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINT-GGLTPTALFSEK  205 (375)
Q Consensus       145 ~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~-~g~tpl~~a~~~  205 (375)
                      + |+++|.+|..|+||||+|+..++.       ++.++|  +|++++.+|+ .|.||++.+...
T Consensus       451 ~-GADINakD~~G~TPLh~Aa~~~~~-------eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~  506 (672)
T PHA02730        451 Y-MDDIDMIDNENKTLLYYAVDVNNI-------QFARRLLEYGASVNTTSRSIINTAIQKSSYR  506 (672)
T ss_pred             c-ccchhccCCCCCCHHHHHHHhCCH-------HHHHHHHHCCCCCCCCCCcCCcCHHHHHHHh
Confidence            7 999999999999999999999877       777777  8899999997 599999998763

>PHA02795 ankyrin-like protein; Provisional

Probab=99.92  E-value=5.1e-25  Score=207.25  Aligned_cols=185  Identities=11%  Similarity=-0.019  Sum_probs=164.6

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHh------chhcCCChHHHHHHH--cCcHHHHH
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLA------KKNKIGCTAFFYAAG--SGMVEIVE   74 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~------~~d~~g~tpLh~Aa~--~g~~~iv~   74 (375)
                      .-+++..+|+++|.+ +.+|     +|+..+..|+++.|+.+  +++++      .++..++|+||+|+.  .|+.++++
T Consensus        64 ~~~~~~~~~~~i~~~-~~~~-----~~~~~~~k~~~~~l~s~--~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~  135 (437)
T PHA02795         64 LYDYFRIHRDNIDQY-IVDR-----LFAYITYKDIISALVSK--NYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVD  135 (437)
T ss_pred             HHHHHHHcCcchhhh-hhhh-----HHhhcchHHHHHHHHhc--ccccchhhhhhhccccccHHHHHHHHhcCCCHHHHH
Confidence            356788899999987 6666     89999999999999999  88877      788899999999998  99999999


Q ss_pred             HHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc--CCcc-----cchhhHHHHHHHhcCcHHHHHHHHhcCC
Q 037666           75 EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK--GSLT-----DDECIELLVKLIETDLYAVALRLLKDRP  147 (375)
Q Consensus        75 ~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~--~~~~-----d~~g~t~Lh~A~~~~~~~~v~~LL~~~~  147 (375)
                      +|+++|+++ +.  .++.||+|.|+..|+.+++++|+++|+  .+..     +..+.+++|.|..+++.++++.|+.+ |
T Consensus       136 ~LI~~GADI-n~--~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~-G  211 (437)
T PHA02795        136 FMVDHGAVI-YK--IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPY-I  211 (437)
T ss_pred             HHHHCCCCC-CC--CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhC-c
Confidence            999999997 54  355899999999999999999999996  2222     23477899999999999999999998 9


Q ss_pred             cccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          148 QLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       148 ~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      +++|.+|.+|+||||+|+..|+.       ++.++|  +|++++.+|..|.||+++|....
T Consensus       212 ADIN~kD~~G~TpLh~Aa~~g~~-------eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g  265 (437)
T PHA02795        212 EDINQLDAGGRTLLYRAIYAGYI-------DLVSWLLENGANVNAVMSNGYTCLDVAVDRG  265 (437)
T ss_pred             CCcCcCCCCCCCHHHHHHHcCCH-------HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence            99999999999999999999988       788877  88999999999999999998764

>PHA02917 ankyrin-like protein; Provisional

Probab=99.91  E-value=4e-24  Score=214.89  Aligned_cols=190  Identities=11%  Similarity=-0.033  Sum_probs=152.9

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHH----HHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHH
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCID----FVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAM   77 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~----~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll   77 (375)
                      +++++|+++|++++.+ |.+|+||||+|+..|+.+    +++.|++..  ...+..|  ..+++|+|+..|+.+++++|+
T Consensus        49 ~~v~~Ll~~ga~v~~~-~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~--~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll  123 (661)
T PHA02917         49 EVVKLLLDSGTNPLHK-NWRQLTPLEEYTNSRHVKVNKDIAMALLEAT--GYSNIND--FNIFSYMKSKNVDVDLIKVLV  123 (661)
T ss_pred             HHHHHHHHCCCCcccc-CCCCCCHHHHHHHcCChhHHHHHHHHHHhcc--CCCCCCC--cchHHHHHhhcCCHHHHHHHH
Confidence            5788899999999987 999999999999999955    456777662  2234433  347788899999999999999


Q ss_pred             ccCCCCccccCCCCChHHHHH--HHcCcHHHHHHHHHhcc-CCcccc---hh-----------hHHHHHHHh--------
Q 037666           78 KGNKDIAMVPGGDGTLPIVRA--AALGQRQTVVLLYEKTK-GSLTDD---EC-----------IELLVKLIE--------  132 (375)
Q Consensus        78 ~~~~~~~~~~d~~g~tpLh~A--a~~g~~~iv~~Ll~~~~-~~~~d~---~g-----------~t~Lh~A~~--------  132 (375)
                      +.|+++ +.+|.+|+||||.|  +..|+.+++++|+++|+ ++.+|.   .|           .||||+|+.        
T Consensus       124 ~~Gadi-n~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~  202 (661)
T PHA02917        124 EHGFDL-SVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESD  202 (661)
T ss_pred             HcCCCC-CccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhccccccc
Confidence            999997 89999999999964  45789999999999998 654432   33           599999986        


Q ss_pred             ---cCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc-chhhHh----hhcCCCCChhhhhH
Q 037666          133 ---TDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV-PKKLAE----AINTGGLTPTALFS  203 (375)
Q Consensus       133 ---~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L-~~~~~~----~~n~~g~tpl~~a~  203 (375)
                         .++.+++++|++. |.++|.+|.+|+||||+|+++++..     .+++++| .+++.+    ..|..|.+|.+++.
T Consensus       203 ~~~~~~~eiv~~Li~~-Gadvn~~d~~G~TpLh~A~~~g~~~-----~eivk~Li~g~d~~~~~~~~~~~~~~~~~~a~  275 (661)
T PHA02917        203 TRAYVRPEVVKCLINH-GIKPSSIDKNYCTALQYYIKSSHID-----IDIVKLLMKGIDNTAYSYIDDLTCCTRGIMAD  275 (661)
T ss_pred             ccccCcHHHHHHHHHC-CCCcccCCCCCCcHHHHHHHcCCCc-----HHHHHHHHhCCcccccccccCcccccchHHHH
Confidence               4688999999998 9999999999999999999998641     0466666 555543    45667777777766

>PHA02792 ankyrin-like protein; Provisional

Probab=99.91  E-value=5.1e-24  Score=207.55  Aligned_cols=190  Identities=14%  Similarity=0.052  Sum_probs=136.5

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHH-cCCHHHHHHHHHcCChhh-------------------------------
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQ-ANCIDFVKELLKMMSTED-------------------------------   49 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~-~g~~~~v~~Ll~~~~~~~-------------------------------   49 (375)
                      |++++|+.+|+++|.+ +..|.||||+|+. .|+.|++++|+++  |++                               
T Consensus        86 Elvk~LI~~GAdvN~~-~n~~~~~l~ya~~~~~~~eivk~Ll~~--Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  162 (631)
T PHA02792         86 ELLKLLISKGLEINSI-KNGINIVEKYATTSNPNVDVFKLLLDK--GIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDY  162 (631)
T ss_pred             HHHHHHHHcCCCcccc-cCCCCcceeEeecCCCChHHHHHHHHC--CCCcccccccCcchhhhhcccccccchhhhcccc
Confidence            6788999999999988 7778999999966 6899999999998  432                               


Q ss_pred             -----HhchhcCCChHHHHHHHcC-------cHHHHHHHHccCCCCccccCCCCChHHHHHHHcC--cHHHHHHHHHh--
Q 037666           50 -----LAKKNKIGCTAFFYAAGSG-------MVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALG--QRQTVVLLYEK--  113 (375)
Q Consensus        50 -----~~~~d~~g~tpLh~Aa~~g-------~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g--~~~iv~~Ll~~--  113 (375)
                           +|..|..|.||||+|+..+       +.+++++|+++|++. +.+|..|.||||+|+.+.  +.|++++|++.  
T Consensus       163 ~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~-~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~  241 (631)
T PHA02792        163 DYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEM-RYYTYREHTTLYYYVDKCDIKREIFDALFDSNY  241 (631)
T ss_pred             ccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCc-CccCCCCChHHHHHHHcccchHHHHHHHHhccc
Confidence                 2356677999999999988       899999999999986 778889999999999888  54555554432  


Q ss_pred             --------------------------------------------------------------------------------
Q 037666          114 --------------------------------------------------------------------------------  113 (375)
Q Consensus       114 --------------------------------------------------------------------------------  113 (375)
                                                                                                      
T Consensus       242 ~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~i  321 (631)
T PHA02792        242 SGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYI  321 (631)
T ss_pred             cccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccH
Confidence                                                                                            


Q ss_pred             ---------cc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCC--CcHHHHHHHhcCCCCCCCccch--
Q 037666          114 ---------TK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNE--ETALHVLARKNLTSSNQNPCGV--  179 (375)
Q Consensus       114 ---------~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G--~T~Lh~A~~~~~~~~~~~~~~v--  179 (375)
                               |. ..  .....+.++.|+.+++.++++.|+++ |++++.+|.+|  .||||.|+.....       ++  
T Consensus       322 eiIK~LId~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~-GADIN~kD~~g~~~TpLh~A~~n~~~-------~v~~  391 (631)
T PHA02792        322 NVIKCMIDEGATLY--RFKHINKYFQKFDNRDPKVVEYILKN-GNVVVEDDDNIINIMPLFPTLSIHES-------DVLS  391 (631)
T ss_pred             HHHHHHHHCCCccc--cCCcchHHHHHHHcCCHHHHHHHHHc-CCchhhhcCCCCChhHHHHHHHhccH-------hHHH
Confidence                     21 00  00133456667777777777777776 77777777664  4777766555432       22  


Q ss_pred             -hhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          180 -ENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       180 -~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                       .+++  ++++++.+|+.|+||+++|...
T Consensus       392 IlklLIs~GADIN~kD~~G~TPLh~Aa~~  420 (631)
T PHA02792        392 ILKLCKPYIDDINKIDKHGRSILYYCIES  420 (631)
T ss_pred             HHHHHHhcCCccccccccCcchHHHHHHc
Confidence             2322  5667777777777777776644

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.91  E-value=1e-23  Score=219.10  Aligned_cols=159  Identities=16%  Similarity=0.056  Sum_probs=146.7

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.+.|+++|+++|.. |.+|+||||+|+..|+.++++.|+++  +.+++.+|.+|+||||+|+..|+.++++.|++.+.
T Consensus       539 ~~l~~Ll~~G~d~n~~-d~~G~TpLh~Aa~~g~~~~v~~Ll~~--gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~  615 (823)
T PLN03192        539 ALLEELLKAKLDPDIG-DSKGRTPLHIAASKGYEDCVLVLLKH--ACNVHIRDANGNTALWNAISAKHHKIFRILYHFAS  615 (823)
T ss_pred             HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcChHHHHHHHHhc--CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCc
Confidence            3567778899999997 99999999999999999999999999  89999999999999999999999999999998765


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCC-Cc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNE-ET  159 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G-~T  159 (375)
                      ..   ....|.+|||.|+.+|+.++++.|+++++ ++.+|.+|+||||.|+.+|+.++++.|+++ |++++.+|.+| .|
T Consensus       616 ~~---~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~-GAdv~~~~~~g~~t  691 (823)
T PLN03192        616 IS---DPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMN-GADVDKANTDDDFS  691 (823)
T ss_pred             cc---CcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHc-CCCCCCCCCCCCCC
Confidence            43   24567899999999999999999999999 899999999999999999999999999988 99999999998 99


Q ss_pred             HHHHHHHh
Q 037666          160 ALHVLARK  167 (375)
Q Consensus       160 ~Lh~A~~~  167 (375)
                      |++++...
T Consensus       692 ~~~l~~~~  699 (823)
T PLN03192        692 PTELRELL  699 (823)
T ss_pred             HHHHHHHH
Confidence            99988664

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.90  E-value=1.4e-24  Score=221.44  Aligned_cols=188  Identities=22%  Similarity=0.222  Sum_probs=105.6

Q ss_pred             HhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccc
Q 037666            7 YDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMV   86 (375)
Q Consensus         7 L~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~   86 (375)
                      +.+.|.++|.. .+.|.||||.|+..||.++++.|++.  .+..+...+.|.+++|.|...+...+++.+++.+.+. +.
T Consensus       460 l~~~g~~~n~~-s~~G~T~Lhlaaq~Gh~~~~~llle~--~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v-~~  535 (1143)
T KOG4177|consen  460 LLQYGADPNAV-SKQGFTPLHLAAQEGHTEVVQLLLEG--GANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANV-DL  535 (1143)
T ss_pred             HhhcCCCcchh-ccccCcchhhhhccCCchHHHHhhhc--CCccCccchhccchhhhhhhhhhHHHHHHHhhcCCce-eh
Confidence            33444444443 44455555555555555554444444  3334444444455555555555555555555555553 55


Q ss_pred             cCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHH
Q 037666           87 PGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLA  165 (375)
Q Consensus        87 ~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~  165 (375)
                      ++..|.||||.|+.+|+.++|++|+++++ ++.+|+.|+||||.|+..|+.++++.|+++ |+++|..|.+|.||||+|+
T Consensus       536 ~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~-GA~vna~d~~g~TpL~iA~  614 (1143)
T KOG4177|consen  536 RTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKH-GASVNAADLDGFTPLHIAV  614 (1143)
T ss_pred             hcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHc-CCCCCcccccCcchhHHHH
Confidence            56666666666666666666666666666 666666666666666666666666666665 6666666666666666666


Q ss_pred             HhcCCCCCCCccchhhcc--chhh-----HhhhcCCCCChhhhhHHHH
Q 037666          166 RKNLTSSNQNPCGVENVV--PKKL-----AEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       166 ~~~~~~~~~~~~~v~~~L--~~~~-----~~~~n~~g~tpl~~a~~~~  206 (375)
                      +.|..       .+.+.+  .+..     ....+..|.+|.++..+..
T Consensus       615 ~lg~~-------~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~~~  655 (1143)
T KOG4177|consen  615 RLGYL-------SVVKLLKVVTATPAATDPVKENRKGAVPEDVAEELD  655 (1143)
T ss_pred             Hhccc-------chhhHHHhccCccccccchhhhhcccChhhHHHHhh
Confidence            66655       444444  2333     4455566666666655443

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.90  E-value=1.5e-23  Score=191.39  Aligned_cols=152  Identities=20%  Similarity=0.159  Sum_probs=141.7

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHH
Q 037666           20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAA   99 (375)
Q Consensus        20 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa   99 (375)
                      -+|-+||..|+..||.|+|+.|+++  ++++|.......|||-.||.-|+.++||+|+++++|+ ++.|+.|.|.||+|+
T Consensus        82 IegappLWaAsaAGHl~vVk~L~~~--ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~-~IanrhGhTcLmIa~  158 (615)
T KOG0508|consen   82 IEGAPPLWAASAAGHLEVVKLLLRR--GASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADP-EIANRHGHTCLMIAC  158 (615)
T ss_pred             cCCCchhhHHhccCcHHHHHHHHHh--cCccccccccCCccHHHHHhcchhHHHHHHHHcCCCC-cccccCCCeeEEeee
Confidence            4688999999999999999999999  8999999999999999999999999999999999996 999999999999999


Q ss_pred             HcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccc
Q 037666          100 ALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCG  178 (375)
Q Consensus       100 ~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~  178 (375)
                      .+|+.+++++|++.++ ++.++..|+|+||.+++.|+.++++.|+++ +..+ .+|..|.|||..|+..|+.       +
T Consensus       159 ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~-ga~i-~~d~~GmtPL~~Aa~tG~~-------~  229 (615)
T KOG0508|consen  159 YKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKH-GAKI-DVDGHGMTPLLLAAVTGHT-------D  229 (615)
T ss_pred             ccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhC-Ccee-eecCCCCchHHHHhhhcch-------H
Confidence            9999999999999999 999999999999999999999999999998 6555 5778899999999999987       5


Q ss_pred             hhhcc
Q 037666          179 VENVV  183 (375)
Q Consensus       179 v~~~L  183 (375)
                      +++.|
T Consensus       230 iVe~L  234 (615)
T KOG0508|consen  230 IVERL  234 (615)
T ss_pred             HHHHH
Confidence            66555

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.90  E-value=3.7e-23  Score=174.00  Aligned_cols=146  Identities=9%  Similarity=-0.083  Sum_probs=128.7

Q ss_pred             hCccccccccCCCCCcHHHHHHHcCCH----HHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHH---HHHHHHccCC
Q 037666            9 KYEDEIGQEITNLGNTALHVAAQANCI----DFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVE---IVEEAMKGNK   81 (375)
Q Consensus         9 ~~~~~~~~~~d~~g~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~---iv~~Ll~~~~   81 (375)
                      .++++++.. +.++.++||.||+.|+.    +++++|++.  +.+++.+|..|+||||+|+..|+.+   ++++|++.++
T Consensus         8 ~~~~~~~~~-~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~--g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Ga   84 (166)
T PHA02743          8 GNNLGAVEI-DEDEQNTFLRICRTGNIYELMEVAPFISGD--GHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGA   84 (166)
T ss_pred             ccchHHhhh-ccCCCcHHHHHHHcCCHHHHHHHHHHHhhc--chhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCC
Confidence            367788876 88899999999999998    556667777  7889999999999999999998865   4899999999


Q ss_pred             CCccccC-CCCChHHHHHHHcCcHHHHHHHHH-hcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCC
Q 037666           82 DIAMVPG-GDGTLPIVRAAALGQRQTVVLLYE-KTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEE  158 (375)
Q Consensus        82 ~~~~~~d-~~g~tpLh~Aa~~g~~~iv~~Ll~-~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~  158 (375)
                      ++ +.+| ..|.||||+|+..|+.+++++|++ .+. .+.+|.+|+||||+|+..++.++++.|+.+ +.+++.++..|.
T Consensus        85 di-n~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~-ga~~~~~~~~~~  162 (166)
T PHA02743         85 DI-NARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRAN-GAVCDDPLSIGL  162 (166)
T ss_pred             CC-CCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcccCCc
Confidence            97 7787 589999999999999999999996 576 788999999999999999999999999988 899999988875


Q ss_pred             c
Q 037666          159 T  159 (375)
Q Consensus       159 T  159 (375)
                      .
T Consensus       163 ~  163 (166)
T PHA02743        163 S  163 (166)
T ss_pred             c
Confidence            3

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.90  E-value=5.7e-24  Score=188.47  Aligned_cols=160  Identities=23%  Similarity=0.217  Sum_probs=144.8

Q ss_pred             cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHH-----cCcHHHHHHHHccCCCCccccC
Q 037666           14 IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAG-----SGMVEIVEEAMKGNKDIAMVPG   88 (375)
Q Consensus        14 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~-----~g~~~iv~~Ll~~~~~~~~~~d   88 (375)
                      +|.. |.+|+|+||||+.++++++|+.||+.. -.+++.+|.-|+||+++|+.     ..+.++|..|.+.| ++.-...
T Consensus       261 VNla-DsNGNTALHYsVSHaNF~VV~~LLDSg-vC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAs  337 (452)
T KOG0514|consen  261 VNLA-DSNGNTALHYAVSHANFDVVSILLDSG-VCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKAS  337 (452)
T ss_pred             hhhh-cCCCCeeeeeeecccchHHHHHHhccC-cccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhh
Confidence            5666 999999999999999999999999985 56899999999999999874     35678999999876 4423445


Q ss_pred             CCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHh
Q 037666           89 GDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARK  167 (375)
Q Consensus        89 ~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~  167 (375)
                      ..|+|+|++|+.+|+.++|+.|+..++ +|++|.+|.|+|+.|+++||.++++.||.....++...|.+|-|+|.+|-..
T Consensus       338 Q~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAlea  417 (452)
T KOG0514|consen  338 QHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEA  417 (452)
T ss_pred             hhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhc
Confidence            679999999999999999999999999 9999999999999999999999999999998999999999999999999999


Q ss_pred             cCCCCCCCccchhhcc
Q 037666          168 NLTSSNQNPCGVENVV  183 (375)
Q Consensus       168 ~~~~~~~~~~~v~~~L  183 (375)
                      |+.       +|..+|
T Consensus       418 gh~-------eIa~ml  426 (452)
T KOG0514|consen  418 GHR-------EIAVML  426 (452)
T ss_pred             Cch-------HHHHHH
Confidence            988       888777

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.90  E-value=1.4e-23  Score=214.20  Aligned_cols=192  Identities=21%  Similarity=0.229  Sum_probs=179.6

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcC-CHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQAN-CIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g-~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      +++++.+++++.+.. +..|.||+|+|+..| ..+....+++.  +.++|..-..|.||||.|+..|+.++++.|++.++
T Consensus       422 ~v~l~l~~gA~~~~~-~~lG~T~lhvaa~~g~~~~~~~~l~~~--g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~  498 (1143)
T KOG4177|consen  422 VVKLLLKRGASPNAK-AKLGYTPLHVAAKKGRYLQIARLLLQY--GADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGA  498 (1143)
T ss_pred             eEEEEeccCCChhhH-hhcCCChhhhhhhcccHhhhhhhHhhc--CCCcchhccccCcchhhhhccCCchHHHHhhhcCC
Confidence            455677789999998 999999999999999 88898999988  89999999999999999999999999999999987


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      .. +...+.|.+++|.|...+...+++.+++++. ++.++.+|.||||.|+..|+.++|++||++ |.+++.+|+.|+||
T Consensus       499 ~~-~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~-gAdv~ak~~~G~TP  576 (1143)
T KOG4177|consen  499 ND-NLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEH-GADVNAKDKLGYTP  576 (1143)
T ss_pred             cc-CccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhC-CccccccCCCCCCh
Confidence            65 6778899999999999999999999999999 899999999999999999999999999999 99999999999999


Q ss_pred             HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ||.|+..|..       ++..+|  +|+++|..|.+|.||+++|....
T Consensus       577 LH~Aa~~G~~-------~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg  617 (1143)
T KOG4177|consen  577 LHQAAQQGHN-------DIAELLLKHGASVNAADLDGFTPLHIAVRLG  617 (1143)
T ss_pred             hhHHHHcChH-------HHHHHHHHcCCCCCcccccCcchhHHHHHhc
Confidence            9999999977       888888  89999999999999999988654

>PHA02730 ankyrin-like protein; Provisional

Probab=99.89  E-value=3.8e-23  Score=203.46  Aligned_cols=193  Identities=16%  Similarity=0.086  Sum_probs=152.5

Q ss_pred             HHHhhCccccccccCCCCCcHHHHHHHcC---CHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcC--cHHHHHHHHcc
Q 037666            5 DIYDKYEDEIGQEITNLGNTALHVAAQAN---CIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG--MVEIVEEAMKG   79 (375)
Q Consensus         5 ~lL~~~~~~~~~~~d~~g~tpLh~A~~~g---~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g--~~~iv~~Ll~~   79 (375)
                      ++..++-+++|...|.+|+||||+|+..|   +.|+|+.|+++  |++++.+|.+|+||||+|+..|  +.+++++|++.
T Consensus        24 ~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~--GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~  101 (672)
T PHA02730         24 KLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSR--GVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISS  101 (672)
T ss_pred             HHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhC--CCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhc
Confidence            34455566777444899999999999997   59999999999  9999999999999999999976  79999999999


Q ss_pred             CCCC-ccccCCCCChHHHHHHH--cCcHHHHHHHHHhcc--CCcc----c-chhhHHHHHHHhcCcHHHHHHHHhcCCcc
Q 037666           80 NKDI-AMVPGGDGTLPIVRAAA--LGQRQTVVLLYEKTK--GSLT----D-DECIELLVKLIETDLYAVALRLLKDRPQL  149 (375)
Q Consensus        80 ~~~~-~~~~d~~g~tpLh~Aa~--~g~~~iv~~Ll~~~~--~~~~----d-~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~  149 (375)
                      +++. .+..|..+.+|||.++.  +++.+++++|++.+.  ++..    + ..|.+|++++..+++.+++++|++. |++
T Consensus       102 ~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~-g~~  180 (672)
T PHA02730        102 YSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKS-ECY  180 (672)
T ss_pred             CCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHc-CCc
Confidence            6542 25577779999999888  899999999997443  3322    2 3789999999999999999999999 887


Q ss_pred             cc-------cccCCCC-cHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhh
Q 037666          150 AT-------KRDRNEE-TALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTAL  201 (375)
Q Consensus       150 ~~-------~~d~~G~-T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~  201 (375)
                      ++       ..|..+. |.||+....+..+ ..-+.++.++|  +|++++.+|.+|.||+++
T Consensus       181 v~g~~~~~~~~~~~~c~~~l~~~il~~~~~-~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~  241 (672)
T PHA02730        181 STGYVFRSCMYDSDRCKNSLHYYILSHRES-ESLSKDVIKCLIDNNVSIHGRDEGGSLPIQY  241 (672)
T ss_pred             ccccccccccccCCccchhHHHHHHhhhhh-hccCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            74       2444444 6677555442211 11112788887  899999999999999996

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.89  E-value=1.9e-23  Score=173.27  Aligned_cols=182  Identities=17%  Similarity=0.075  Sum_probs=111.7

Q ss_pred             CccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCC
Q 037666           10 YEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGG   89 (375)
Q Consensus        10 ~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~   89 (375)
                      ++..++.. |++|.+++|.|+-+|+.+.+..++.+  +...|..+-.+++|+.+++...+.+.+..+.+..   .+..|+
T Consensus        85 ~~~~~~~t-~p~g~~~~~v~ap~~s~~k~sttltN--~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~---VN~~De  158 (296)
T KOG0502|consen   85 DPDAIDET-DPEGWSALLVAAPCGSVDKVSTTLTN--GARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNK---VNACDE  158 (296)
T ss_pred             CCCCCCCC-CchhhhhhhhcCCCCCcceeeeeecc--cccCCccccccCChhhHHHHHHHHHHHHHHhhcc---ccCccc
Confidence            33333343 66677777777777777766666666  5556666666666666666666666555554432   245566


Q ss_pred             CCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhc
Q 037666           90 DGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKN  168 (375)
Q Consensus        90 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~  168 (375)
                      .|.|||.+|+.+|+.++|++|++.|+ ++...+...++|.+|++.|..++|+.||.+ +.++|.-|-+|.|||-+|++.+
T Consensus       159 ~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r-~vdVNvyDwNGgTpLlyAvrgn  237 (296)
T KOG0502|consen  159 FGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTR-EVDVNVYDWNGGTPLLYAVRGN  237 (296)
T ss_pred             cCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhc-CCCcceeccCCCceeeeeecCC
Confidence            66666666666666666666666666 555555666666666666666666666665 6666666666666666666665


Q ss_pred             CCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          169 LTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       169 ~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      +.       ++.+.|  .|++++..+..|.+++++|...
T Consensus       238 hv-------kcve~Ll~sGAd~t~e~dsGy~~mdlAVal  269 (296)
T KOG0502|consen  238 HV-------KCVESLLNSGADVTQEDDSGYWIMDLAVAL  269 (296)
T ss_pred             hH-------HHHHHHHhcCCCcccccccCCcHHHHHHHh
Confidence            54       344333  5566666666666666665543

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.89  E-value=4.1e-23  Score=213.23  Aligned_cols=195  Identities=18%  Similarity=0.142  Sum_probs=144.9

Q ss_pred             HHHHHhhC--ccccccccCCCCCcHHH-HHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcC---cHHHHHHH
Q 037666            3 AKDIYDKY--EDEIGQEITNLGNTALH-VAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG---MVEIVEEA   76 (375)
Q Consensus         3 v~~lL~~~--~~~~~~~~d~~g~tpLh-~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g---~~~iv~~L   76 (375)
                      ++++| ++  +.++|.. |..|+|||| .|+.+++.++++.|+++  +.    .+..|.||||.|+..+   ..++++.+
T Consensus        33 v~~lL-~~~~~~~in~~-d~~G~t~Lh~~A~~~~~~eiv~lLl~~--g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l  104 (743)
T TIGR00870        33 VYRDL-EEPKKLNINCP-DRLGRSALFVAAIENENLELTELLLNL--SC----RGAVGDTLLHAISLEYVDAVEAILLHL  104 (743)
T ss_pred             HHHHh-ccccccCCCCc-CccchhHHHHHHHhcChHHHHHHHHhC--CC----CCCcChHHHHHHHhccHHHHHHHHHHH
Confidence            34444 45  7888887 999999999 89999999999999998  54    6788999999999732   22344444


Q ss_pred             HccCCCC---------ccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCccc--------------chhhHHHHHHHh
Q 037666           77 MKGNKDI---------AMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTD--------------DECIELLVKLIE  132 (375)
Q Consensus        77 l~~~~~~---------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d--------------~~g~t~Lh~A~~  132 (375)
                      .+.+++.         ....+..|.||||+|+.+|+.+++++|+++|+ ++.++              ..|+||||.|+.
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~  184 (743)
T TIGR00870       105 LAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAAC  184 (743)
T ss_pred             hhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHH
Confidence            4443220         01123569999999999999999999999998 55432              358999999999


Q ss_pred             cCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCC--CCccchhhcc-----chhhH----hhhcCCCCChhhh
Q 037666          133 TDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSN--QNPCGVENVV-----PKKLA----EAINTGGLTPTAL  201 (375)
Q Consensus       133 ~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~--~~~~~v~~~L-----~~~~~----~~~n~~g~tpl~~  201 (375)
                      .++.++++.|+++ |+++|.+|+.|+||||+|+..+.....  ++...+.+.+     ...+.    +.+|++|.||+++
T Consensus       185 ~~~~~iv~lLl~~-gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~  263 (743)
T TIGR00870       185 LGSPSIVALLSED-PADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKL  263 (743)
T ss_pred             hCCHHHHHHHhcC-CcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhh
Confidence            9999999999987 899999999999999999988521000  0000122222     11222    6789999999999


Q ss_pred             hHHHH
Q 037666          202 FSEKH  206 (375)
Q Consensus       202 a~~~~  206 (375)
                      |.+..
T Consensus       264 A~~~g  268 (743)
T TIGR00870       264 AAKEG  268 (743)
T ss_pred             hhhcC
Confidence            87653

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PHA02741 hypothetical protein; Provisional

Probab=99.88  E-value=6.5e-22  Score=167.14  Aligned_cols=130  Identities=17%  Similarity=0.196  Sum_probs=115.9

Q ss_pred             cccccCCCCCcHHHHHHHcCCHHHHHHHHHcC----ChhhHhchhcCCChHHHHHHHcCc----HHHHHHHHccCCCCcc
Q 037666           14 IGQEITNLGNTALHVAAQANCIDFVKELLKMM----STEDLAKKNKIGCTAFFYAAGSGM----VEIVEEAMKGNKDIAM   85 (375)
Q Consensus        14 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~----~~~~~~~~d~~g~tpLh~Aa~~g~----~~iv~~Ll~~~~~~~~   85 (375)
                      ++.+ |..|+||||+|++.|+.++++.|++..    .+.+++.+|..|+||||+|+..|+    .+++++|++.++++ +
T Consensus        14 ~~~~-~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadi-n   91 (169)
T PHA02741         14 IAEK-NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADI-N   91 (169)
T ss_pred             hhcc-ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCC-C
Confidence            4555 889999999999999999999986531    157899999999999999999999    58999999999997 7


Q ss_pred             ccCC-CCChHHHHHHHcCcHHHHHHHHHh-cc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           86 VPGG-DGTLPIVRAAALGQRQTVVLLYEK-TK-GSLTDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        86 ~~d~-~g~tpLh~Aa~~g~~~iv~~Ll~~-~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      .+|. +|.||||+|+..++.+++++|++. +. .+..|.+|+||||.|+..++.++++.|++.
T Consensus        92 ~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~  154 (169)
T PHA02741         92 AQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREI  154 (169)
T ss_pred             CCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHH
Confidence            7775 899999999999999999999974 66 788899999999999999999999998876

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.87  E-value=5.9e-22  Score=184.26  Aligned_cols=189  Identities=20%  Similarity=0.170  Sum_probs=157.4

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++..+ ...|+++|.. +.+|.|+||-+|.-.+.++|++|+++  ++++|..|.+|+||||.|+..||..++++|++.++
T Consensus        55 ev~~l-l~~ga~~~~~-n~DglTalhq~~id~~~e~v~~l~e~--ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA  130 (527)
T KOG0505|consen   55 EVRKL-LNRGASPNLC-NVDGLTALHQACIDDNLEMVKFLVEN--GANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGA  130 (527)
T ss_pred             HHHHH-hccCCCcccc-CCccchhHHHHHhcccHHHHHHHHHh--cCCccccccccCCcchhhcccccHHHHHHHHHhhh
Confidence            34444 4467778887 99999999999999999999999999  89999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHH-------------cCc--------------HHHHHHHHHhcc-CCcccchhhHHHHHHHhc
Q 037666           82 DIAMVPGGDGTLPIVRAAA-------------LGQ--------------RQTVVLLYEKTK-GSLTDDECIELLVKLIET  133 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~-------------~g~--------------~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~  133 (375)
                      ++ ...|.+|..|+-.+..             .|-              .++-.+ +..+. .+.++..|-|.||.|+.+
T Consensus       131 ~~-~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~-l~~G~~~d~~~~rG~T~lHvAaa~  208 (527)
T KOG0505|consen  131 NL-LAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQW-LNAGAELDARHARGATALHVAAAN  208 (527)
T ss_pred             hh-hhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHH-HhccccccccccccchHHHHHHhh
Confidence            86 5667777666543221             111              112222 33455 566677799999999999


Q ss_pred             CcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHH
Q 037666          134 DLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSE  204 (375)
Q Consensus       134 ~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~  204 (375)
                      |..++.+.|++. +..++.+|.+|+||||.|+.-+..       ++.++|  ++++.+.++..|.||++++.+
T Consensus       209 Gy~e~~~lLl~a-g~~~~~~D~dgWtPlHAAA~Wg~~-------~~~elL~~~ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  209 GYTEVAALLLQA-GYSVNIKDYDGWTPLHAAAHWGQE-------DACELLVEHGADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             hHHHHHHHHHHh-ccCcccccccCCCcccHHHHhhhH-------hHHHHHHHhhcccchhhhcCCCCccchhh
Confidence            999999999998 999999999999999999999877       777777  889999999999999999876

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.86  E-value=1.6e-21  Score=164.12  Aligned_cols=142  Identities=13%  Similarity=0.053  Sum_probs=124.2

Q ss_pred             hhhHhchhcCCChHHHHHHHcCcH----HHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHH---HHHHHHhcc-CCc
Q 037666           47 TEDLAKKNKIGCTAFFYAAGSGMV----EIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQT---VVLLYEKTK-GSL  118 (375)
Q Consensus        47 ~~~~~~~d~~g~tpLh~Aa~~g~~----~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~i---v~~Ll~~~~-~~~  118 (375)
                      +.+++..+.++.+++|.|++.|+.    +++++|.+.+..+ +.+|.+|+||||+|+.+|+.+.   +++|++.++ ++.
T Consensus        10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~-~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~   88 (166)
T PHA02743         10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLL-HRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA   88 (166)
T ss_pred             chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhh-hccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence            677888899999999999999998    5666777877775 7889999999999999988654   799999998 888


Q ss_pred             cc-chhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCC
Q 037666          119 TD-DECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGG  195 (375)
Q Consensus       119 ~d-~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g  195 (375)
                      +| ..|+||||+|+..++.+++++|+...+.+++.+|.+|.||||+|+..+..       ++.++|  ++++++.++..|
T Consensus        89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~-------~iv~~Ll~~ga~~~~~~~~~  161 (166)
T PHA02743         89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDR-------RMMEILRANGAVCDDPLSIG  161 (166)
T ss_pred             CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCH-------HHHHHHHHcCCCCCCcccCC
Confidence            87 58999999999999999999999655999999999999999999999877       788877  677888887776


Q ss_pred             C
Q 037666          196 L  196 (375)
Q Consensus       196 ~  196 (375)
                      .
T Consensus       162 ~  162 (166)
T PHA02743        162 L  162 (166)
T ss_pred             c
Confidence            5

>PHA02741 hypothetical protein; Provisional

Probab=99.86  E-value=3.3e-21  Score=162.78  Aligned_cols=129  Identities=15%  Similarity=0.046  Sum_probs=113.6

Q ss_pred             hHhchhcCCChHHHHHHHcCcHHHHHHHHcc------CCCCccccCCCCChHHHHHHHcCc----HHHHHHHHHhcc-CC
Q 037666           49 DLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG------NKDIAMVPGGDGTLPIVRAAALGQ----RQTVVLLYEKTK-GS  117 (375)
Q Consensus        49 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~------~~~~~~~~d~~g~tpLh~Aa~~g~----~~iv~~Ll~~~~-~~  117 (375)
                      .++.+|..|.||||+|++.|+.++++.|+..      +.++ +.+|..|.||||+|+..|+    .+++++|++.++ ++
T Consensus        13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~i-n~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin   91 (169)
T PHA02741         13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAAL-NATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADIN   91 (169)
T ss_pred             HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhh-hccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCC
Confidence            3556788999999999999999999998642      3554 7889999999999999998    588999999998 78


Q ss_pred             cccc-hhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccch
Q 037666          118 LTDD-ECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPK  185 (375)
Q Consensus       118 ~~d~-~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~  185 (375)
                      .++. +|+||||+|+..++.+++++|+...+.+++.+|.+|.||||+|+..+..       ++.++|..
T Consensus        92 ~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~-------~iv~~L~~  153 (169)
T PHA02741         92 AQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDV-------AMMQILRE  153 (169)
T ss_pred             CCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCH-------HHHHHHHH
Confidence            7775 8999999999999999999999865889999999999999999999977       78887743

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.86  E-value=4e-22  Score=165.45  Aligned_cols=180  Identities=16%  Similarity=0.118  Sum_probs=162.3

Q ss_pred             HhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccc
Q 037666            7 YDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMV   86 (375)
Q Consensus         7 L~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~   86 (375)
                      ++.++...|+. +--+.+|+.+++...|.+.+..+.+.    -+|..|+.|.|||.||+..|++++|++|++.|++. ..
T Consensus       115 tltN~~rgnev-s~~p~s~~slsVhql~L~~~~~~~~n----~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp-~~  188 (296)
T KOG0502|consen  115 TLTNGARGNEV-SLMPWSPLSLSVHQLHLDVVDLLVNN----KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADP-DA  188 (296)
T ss_pred             eecccccCCcc-ccccCChhhHHHHHHHHHHHHHHhhc----cccCccccCchHhHHHHhcCchHHHHHHHHcCCCh-hh
Confidence            45567777776 78899999999999998888777755    58999999999999999999999999999999995 88


Q ss_pred             cCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHH
Q 037666           87 PGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLA  165 (375)
Q Consensus        87 ~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~  165 (375)
                      ..+...++|.+|++.|..++|++|+++++ ++..|.+|-|||-+|++.+|.++++.||.. |++++..|..|++++.+|+
T Consensus       189 lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~s-GAd~t~e~dsGy~~mdlAV  267 (296)
T KOG0502|consen  189 LGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNS-GADVTQEDDSGYWIMDLAV  267 (296)
T ss_pred             hhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhc-CCCcccccccCCcHHHHHH
Confidence            88899999999999999999999999999 999999999999999999999999999999 9999999999999999999


Q ss_pred             HhcCCCCCCCccchhhcc-chhhHhhhcCCCCChhh
Q 037666          166 RKNLTSSNQNPCGVENVV-PKKLAEAINTGGLTPTA  200 (375)
Q Consensus       166 ~~~~~~~~~~~~~v~~~L-~~~~~~~~n~~g~tpl~  200 (375)
                      ..|+.       .|...+ .-.++..+|+.-++|++
T Consensus       268 alGyr-------~Vqqvie~h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  268 ALGYR-------IVQQVIEKHALKLCQDSEKRTPLH  296 (296)
T ss_pred             HhhhH-------HHHHHHHHHHHHHhhcccCCCCCC
Confidence            99987       666666 44677788888888864

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.85  E-value=8.6e-22  Score=174.69  Aligned_cols=165  Identities=17%  Similarity=0.136  Sum_probs=142.1

Q ss_pred             CHHHHHHHHHcC---C----hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHc-----
Q 037666           34 CIDFVKELLKMM---S----TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAAL-----  101 (375)
Q Consensus        34 ~~~~v~~Ll~~~---~----~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~-----  101 (375)
                      +.+.|+--+...   .    .--+|..|.+|+|+||||+.++|.++|+.||+.+..-.+.+|+-|+||+++++..     
T Consensus       238 ~pe~V~~~l~~f~als~~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~  317 (452)
T KOG0514|consen  238 DPEQVEDYLAYFEALSPPLLEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQP  317 (452)
T ss_pred             CHHHHHHHHHHHHhcChHHHHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcch
Confidence            466666544332   0    1137889999999999999999999999999998654588999999999998864     


Q ss_pred             CcHHHHHHHHHhccCCccc-chhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchh
Q 037666          102 GQRQTVVLLYEKTKGSLTD-DECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVE  180 (375)
Q Consensus       102 g~~~iv~~Ll~~~~~~~~d-~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~  180 (375)
                      .+.++|..|+..+.+|.+. ..|+|+|++|+.+|+.++++.||.. |+++|.+|.+|-|+|+.|++.|+.       +++
T Consensus       318 ~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLac-gAdVNiQDdDGSTALMCA~EHGhk-------Eiv  389 (452)
T KOG0514|consen  318 ADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALLAC-GADVNIQDDDGSTALMCAAEHGHK-------EIV  389 (452)
T ss_pred             hhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHHHc-cCCCccccCCccHHHhhhhhhChH-------HHH
Confidence            3567899999988877754 5699999999999999999999988 999999999999999999999988       899


Q ss_pred             hcc---chhhHhhhcCCCCChhhhhHHHH
Q 037666          181 NVV---PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       181 ~~L---~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ++|   +.+++...|.+|-|++.+|.+..
T Consensus       390 klLLA~p~cd~sLtD~DgSTAl~IAleag  418 (452)
T KOG0514|consen  390 KLLLAVPSCDISLTDVDGSTALSIALEAG  418 (452)
T ss_pred             HHHhccCcccceeecCCCchhhhhHHhcC
Confidence            887   78999999999999999987653

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.84  E-value=7.5e-21  Score=158.27  Aligned_cols=132  Identities=12%  Similarity=-0.008  Sum_probs=108.5

Q ss_pred             cccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----ChhhHhchhcCCChHHHHHHHcCcH---HHHHHHHccCCCCcc
Q 037666           14 IGQEITNLGNTALHVAAQANCIDFVKELLKMM-----STEDLAKKNKIGCTAFFYAAGSGMV---EIVEEAMKGNKDIAM   85 (375)
Q Consensus        14 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~-----~~~~~~~~d~~g~tpLh~Aa~~g~~---~iv~~Ll~~~~~~~~   85 (375)
                      .+.. |.+|+||||+|++.|+.  ++.+....     .+..++.+|.+|.||||+|+..|+.   ++++.|++.++++ +
T Consensus        10 ~~~~-d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi-n   85 (154)
T PHA02736         10 ASEP-DIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI-N   85 (154)
T ss_pred             HHhc-CCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCc-c
Confidence            3444 88999999999999983  23332220     0223567799999999999999987   4688999999997 7


Q ss_pred             ccC-CCCChHHHHHHHcCcHHHHHHHHHh-cc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCccc
Q 037666           86 VPG-GDGTLPIVRAAALGQRQTVVLLYEK-TK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLA  150 (375)
Q Consensus        86 ~~d-~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~  150 (375)
                      .+| .+|.||||+|+..|+.+++++|++. +. ++.+|..|+||||+|+..++.++++.|+.. +.+.
T Consensus        86 ~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~-ga~~  152 (154)
T PHA02736         86 GKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAK-GAQC  152 (154)
T ss_pred             ccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHc-CCCC
Confidence            777 5899999999999999999999975 55 788999999999999999999999999887 5543

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.84  E-value=5.6e-21  Score=183.68  Aligned_cols=191  Identities=19%  Similarity=0.111  Sum_probs=133.1

Q ss_pred             ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCC
Q 037666           11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGD   90 (375)
Q Consensus        11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~   90 (375)
                      ..++|.. |.+|.|+||.|+.+|+.++++.|+++  .+.++..|..|.+|||+|++.|+.++++.++..+.. .+..+..
T Consensus        39 sds~n~q-d~~gfTalhha~Lng~~~is~llle~--ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~-~na~~~e  114 (854)
T KOG0507|consen   39 SDSHNLQ-DYSGFTLLHHAVLNGQNQISKLLLDY--EALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDI-LNAVNIE  114 (854)
T ss_pred             Ccccccc-CccchhHHHHHHhcCchHHHHHHhcc--hhhhhhhhccCcceEEehhhcCcchHHHHHHhcccC-CCccccc
Confidence            3455665 77888888888888888888888887  677777777888888888888888888888777744 4777778


Q ss_pred             CChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcC-------CcccccccCCCCcHHH
Q 037666           91 GTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDR-------PQLATKRDRNEETALH  162 (375)
Q Consensus        91 g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~-------~~~~~~~d~~G~T~Lh  162 (375)
                      |.||||.|+++|+.+++.+|+.+++ .-++|.++.|+|.+|++-|..+++..|++..       ...-..++-.+-+|||
T Consensus       115 ~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plH  194 (854)
T KOG0507|consen  115 NETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLH  194 (854)
T ss_pred             CcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcc
Confidence            8888888888888888888888877 6667777777777777777777777776540       0001234556667777


Q ss_pred             HHHHhcCCC------------------CCCCc-------cchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          163 VLARKNLTS------------------SNQNP-------CGVENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       163 ~A~~~~~~~------------------~~~~~-------~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      +|+++|+..                  +..+|       .+++..|  .+.....+|.+|+|++++..+.
T Consensus       195 laakngh~~~~~~ll~ag~din~~t~~gtalheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~  264 (854)
T KOG0507|consen  195 LAAKNGHVECMQALLEAGFDINYTTEDGTALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDL  264 (854)
T ss_pred             hhhhcchHHHHHHHHhcCCCcccccccchhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhc
Confidence            777776441                  01111       1555555  4556677888888888875543

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.83  E-value=2.7e-20  Score=192.36  Aligned_cols=174  Identities=15%  Similarity=0.076  Sum_probs=143.3

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHH-HHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFF-YAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        20 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh-~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      ..++.+++.|++.|+.+.++.+++...+.++|..|..|+|||| .|+.+++.++++.|++.+.     ++..|.||||.|
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A   89 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAI   89 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHH
Confidence            3568999999999999999999988445678899999999999 8889999999999999875     678899999999


Q ss_pred             HHcC---cHHHHHHHHHhccC--------C---cccchhhHHHHHHHhcCcHHHHHHHHhcCCccccccc----------
Q 037666           99 AALG---QRQTVVLLYEKTKG--------S---LTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRD----------  154 (375)
Q Consensus        99 a~~g---~~~iv~~Ll~~~~~--------~---~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d----------  154 (375)
                      +..+   ..++++.+.+..+.        +   ..+..|.||||+|+.+|+.++++.|+++ |++++.++          
T Consensus        90 ~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~-GAdv~~~~~~~~~~~~~~  168 (743)
T TIGR00870        90 SLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLER-GASVPARACGDFFVKSQG  168 (743)
T ss_pred             HhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhC-CCCCCcCcCCchhhcCCC
Confidence            9732   22334444443321        0   1234699999999999999999999998 88888653          


Q ss_pred             ----CCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          155 ----RNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       155 ----~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                          ..|+||||.|+..+++       ++.++|  .+++++.+|+.|+||+|+|....
T Consensus       169 ~~~~~~g~tpL~~Aa~~~~~-------~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~  219 (743)
T TIGR00870       169 VDSFYHGESPLNAAACLGSP-------SIVALLSEDPADILTADSLGNTLLHLLVMEN  219 (743)
T ss_pred             CCcccccccHHHHHHHhCCH-------HHHHHHhcCCcchhhHhhhhhHHHHHHHhhh
Confidence                3599999999999988       888877  67889999999999999988763

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.83  E-value=5.7e-20  Score=166.77  Aligned_cols=141  Identities=10%  Similarity=0.093  Sum_probs=121.3

Q ss_pred             cccccCCCCCc-HHHHHHHcCCHHHHHHHHHcCChhhHhchh----cCCChHHHHHHHcCcHHHHHHHHccCCCCcccc-
Q 037666           14 IGQEITNLGNT-ALHVAAQANCIDFVKELLKMMSTEDLAKKN----KIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVP-   87 (375)
Q Consensus        14 ~~~~~d~~g~t-pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d----~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~-   87 (375)
                      +..+ |..|+| +||.|++.|+.++++.|+++  |++++.++    ..|.||||+|+..|+.+++++|++.|+++ +.+ 
T Consensus        25 ~~~~-d~~~~~~lL~~A~~~~~~eivk~LL~~--GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADV-N~~~  100 (300)
T PHA02884         25 IKKK-NKICIANILYSSIKFHYTDIIDAILKL--GADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADV-NRYA  100 (300)
T ss_pred             hhcc-CcCCCCHHHHHHHHcCCHHHHHHHHHC--CCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-Cccc
Confidence            3444 677766 57778888999999999999  89999874    58999999999999999999999999997 664 


Q ss_pred             CCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHH
Q 037666           88 GGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVL  164 (375)
Q Consensus        88 d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A  164 (375)
                      +..|.||||.|+..|+.+++++|++.++ ++.+|.+|.||||.|++.++.+++..+...      ..|..+.+|++++
T Consensus       101 ~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  172 (300)
T PHA02884        101 EEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN------EISNFYKHPKKIL  172 (300)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC------cccccccChhhhh
Confidence            5689999999999999999999999999 888999999999999998888877554322      3577888999875

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.83  E-value=3.3e-20  Score=148.58  Aligned_cols=138  Identities=17%  Similarity=0.104  Sum_probs=117.7

Q ss_pred             HHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHH
Q 037666           61 FFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVA  139 (375)
Q Consensus        61 Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v  139 (375)
                      +-+|+..+....|+.|++..++..+.+|.+|+||||.|+.+|+.+|++.|+..++ .+.+...|+||||.||+-++.+++
T Consensus        67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va  146 (228)
T KOG0512|consen   67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVA  146 (228)
T ss_pred             HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHH
Confidence            5689999999999999999998889999999999999999999999999999888 888889999999999999999999


Q ss_pred             HHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc---chhhHhhhcCCCCChhhhhHHH
Q 037666          140 LRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV---PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       140 ~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L---~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      ..||++ |+++|...+...||||+|+...+..      ....+|   +..+...+++.+.||+++|.+.
T Consensus       147 ~~LLqh-gaDVnA~t~g~ltpLhlaa~~rn~r------~t~~~Ll~dryi~pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  147 GRLLQH-GADVNAQTKGLLTPLHLAAGNRNSR------DTLELLLHDRYIHPGLKNNLEETAFDIARRT  208 (228)
T ss_pred             HHHHhc-cCcccccccccchhhHHhhcccchH------HHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence            999998 9999999988999999998875331      233333   4556677888999999998765

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.82  E-value=6.9e-20  Score=146.79  Aligned_cols=142  Identities=20%  Similarity=0.162  Sum_probs=128.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcH
Q 037666           25 ALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQR  104 (375)
Q Consensus        25 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~  104 (375)
                      -+-+|+..+....|+.||+.. +..+|.+|.+|+||||-|+.+|+.+|++.|+..+++. +.+...|+||||.||..++.
T Consensus        66 l~lwaae~nrl~eV~~lL~e~-an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~-~a~T~~GWTPLhSAckWnN~  143 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEK-ANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANK-EAKTNEGWTPLHSACKWNNF  143 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhc-cccccccccccccHHHHHHhcCchHHHHHHHHccCCc-ccccccCccchhhhhcccch
Confidence            467899999999999999985 6679999999999999999999999999999999996 88999999999999999999


Q ss_pred             HHHHHHHHhcc-CCcccchhhHHHHHHHhcCcH-HHHHHHHhcCCcccccccCCCCcHHHHHHHhc
Q 037666          105 QTVVLLYEKTK-GSLTDDECIELLVKLIETDLY-AVALRLLKDRPQLATKRDRNEETALHVLARKN  168 (375)
Q Consensus       105 ~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~-~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~  168 (375)
                      +++..|+++++ ++.......||||.|+...+. ..+++|+......+..+++.+.||+.+|-+-+
T Consensus       144 ~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  144 EVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             hHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            99999999999 888888889999999987654 55677777767888889999999999998765

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.82  E-value=1.9e-20  Score=155.87  Aligned_cols=126  Identities=13%  Similarity=0.025  Sum_probs=105.1

Q ss_pred             hHhchhcCCChHHHHHHHcCcHHHHHHHHccC------CCCccccCCCCChHHHHHHHcCcH---HHHHHHHHhcc-CCc
Q 037666           49 DLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGN------KDIAMVPGGDGTLPIVRAAALGQR---QTVVLLYEKTK-GSL  118 (375)
Q Consensus        49 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~------~~~~~~~d~~g~tpLh~Aa~~g~~---~iv~~Ll~~~~-~~~  118 (375)
                      ..+.+|.+|.||||+|++.|+..  +++...+      +.....+|.+|+||||+|+..|+.   +++++|++.+. ++.
T Consensus         9 ~~~~~d~~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~   86 (154)
T PHA02736          9 FASEPDIEGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADING   86 (154)
T ss_pred             HHHhcCCCCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccc
Confidence            46778999999999999999842  3322211      112345789999999999999987   46889999998 777


Q ss_pred             cc-chhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          119 TD-DECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       119 ~d-~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      +| .+|+||||+|+..++.+++++|+...+.+++.+|..|+||||+|+..+..       ++.++|
T Consensus        87 ~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~-------~i~~~L  145 (154)
T PHA02736         87 KERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDA-------KMMNIL  145 (154)
T ss_pred             cCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCH-------HHHHHH
Confidence            77 58999999999999999999999866899999999999999999999877       777766

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.81  E-value=1.8e-19  Score=163.48  Aligned_cols=140  Identities=15%  Similarity=0.080  Sum_probs=118.6

Q ss_pred             HhchhcCCChH-HHHHHHcCcHHHHHHHHccCCCCcccc----CCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcc-cch
Q 037666           50 LAKKNKIGCTA-FFYAAGSGMVEIVEEAMKGNKDIAMVP----GGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLT-DDE  122 (375)
Q Consensus        50 ~~~~d~~g~tp-Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~----d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~-d~~  122 (375)
                      +..+|..|+|+ ||.|++.|+.++++.|++.|+++ +.+    |..|.||||+|+..|+.+++++|+++|+ ++.+ +..
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdi-N~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~  103 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADP-EAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEA  103 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCc-cccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCC
Confidence            55678888876 55667789999999999999996 665    4689999999999999999999999999 8875 567


Q ss_pred             hhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccchhhHhhhcCCCCChhhh
Q 037666          123 CIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTAL  201 (375)
Q Consensus       123 g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~~~~~~~n~~g~tpl~~  201 (375)
                      |.||||.|+..++.++++.|+.. |.+++.+|.+|.||||+|++.+..       ++..++.+..   .+..+.+|..+
T Consensus       104 g~TpLh~Aa~~~~~eivklLL~~-GAdin~kd~~G~TpL~~A~~~~~~-------~~~~~~~~~~---~~~~~~~~~~~  171 (300)
T PHA02884        104 KITPLYISVLHGCLKCLEILLSY-GADINIQTNDMVTPIELALMICNN-------FLAFMICDNE---ISNFYKHPKKI  171 (300)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHhCCh-------hHHHHhcCCc---ccccccChhhh
Confidence            99999999999999999999998 999999999999999999998766       6666555432   45566677654

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.81  E-value=2.3e-20  Score=179.43  Aligned_cols=156  Identities=19%  Similarity=0.106  Sum_probs=126.2

Q ss_pred             hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhH
Q 037666           47 TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIE  125 (375)
Q Consensus        47 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t  125 (375)
                      +...|..|.+|.|.||.|+.+|+.+++++|++..+-+ ...|..|.+|||+|++.|+.++++.++.++. .+..+..|.|
T Consensus        39 sds~n~qd~~gfTalhha~Lng~~~is~llle~ea~l-dl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~t  117 (854)
T KOG0507|consen   39 SDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALL-DLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENET  117 (854)
T ss_pred             CccccccCccchhHHHHHHhcCchHHHHHHhcchhhh-hhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcC
Confidence            4568888899999999999999999999999998875 7888999999999999999999999999888 8888899999


Q ss_pred             HHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCcc----chhhccchhhHhhhcCCCCChhhh
Q 037666          126 LLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPC----GVENVVPKKLAEAINTGGLTPTAL  201 (375)
Q Consensus       126 ~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~----~v~~~L~~~~~~~~n~~g~tpl~~  201 (375)
                      |||.|+++|+.+++.+||++ +.+.-.+|+.+.|+|.+|++.|.....++-+    .+...+ ...-..++-.+.+|+|+
T Consensus       118 plhlaaqhgh~dvv~~Ll~~-~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~-~~~~~~~~~~~~~plHl  195 (854)
T KOG0507|consen  118 PLHLAAQHGHLEVVFYLLKK-NADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSL-RVGDIKRPFPAIYPLHL  195 (854)
T ss_pred             ccchhhhhcchHHHHHHHhc-CCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcc-cCCCCCCCCCCcCCcch
Confidence            99999999999999999998 8999999999999999999987542111100    111111 11134455677788888


Q ss_pred             hHHH
Q 037666          202 FSEK  205 (375)
Q Consensus       202 a~~~  205 (375)
                      +.++
T Consensus       196 aakn  199 (854)
T KOG0507|consen  196 AAKN  199 (854)
T ss_pred             hhhc
Confidence            7654

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.80  E-value=9.6e-18  Score=163.50  Aligned_cols=156  Identities=19%  Similarity=0.170  Sum_probs=132.8

Q ss_pred             cccccccCCCCCcHHHHHHHc---CCHHHHHHHHHcCChhhHhch----hcCCChHHHHHHHcCcHHHHHHHHccCCCCc
Q 037666           12 DEIGQEITNLGNTALHVAAQA---NCIDFVKELLKMMSTEDLAKK----NKIGCTAFFYAAGSGMVEIVEEAMKGNKDIA   84 (375)
Q Consensus        12 ~~~~~~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~~----d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~   84 (375)
                      .+++.+ ..-|+|.||.|..+   ++.++++.|++.. |..+|..    ...|.||||.|+.+.+.++|++|++.|+|+.
T Consensus       134 w~~~~R-Ga~GET~Lh~~lL~~~~~~n~la~~LL~~~-p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~  211 (782)
T KOG3676|consen  134 WKLNER-GATGETLLHKALLNLSDGHNELARVLLEIF-PKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVH  211 (782)
T ss_pred             hccccc-cchhhhHHHHHHhcCchhHHHHHHHHHHHh-HHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchh
Confidence            345555 67899999999984   4569999999987 6666543    3469999999999999999999999998862


Q ss_pred             c-------ccCC---------------CCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHH
Q 037666           85 M-------VPGG---------------DGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALR  141 (375)
Q Consensus        85 ~-------~~d~---------------~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~  141 (375)
                      .       .+++               -|+.||-.||.-++.|++++|+++++ ++.+|.+|+|.||..+.+-..++...
T Consensus       212 aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~  291 (782)
T KOG3676|consen  212 ARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDL  291 (782)
T ss_pred             hHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHH
Confidence            1       0111               27899999999999999999999999 99999999999999999988999999


Q ss_pred             HHhcCCcc--cccccCCCCcHHHHHHHhcCC
Q 037666          142 LLKDRPQL--ATKRDRNEETALHVLARKNLT  170 (375)
Q Consensus       142 LL~~~~~~--~~~~d~~G~T~Lh~A~~~~~~  170 (375)
                      +|+. +..  ...+|++|.|||-+|++.|..
T Consensus       292 ~L~~-ga~~l~~v~N~qgLTPLtLAaklGk~  321 (782)
T KOG3676|consen  292 ALEL-GANALEHVRNNQGLTPLTLAAKLGKK  321 (782)
T ss_pred             HHhc-CCCccccccccCCCChHHHHHHhhhH
Confidence            9988 665  778899999999999999866

>PHA02792 ankyrin-like protein; Provisional

Probab=99.78  E-value=2.5e-18  Score=167.93  Aligned_cols=125  Identities=10%  Similarity=-0.014  Sum_probs=99.4

Q ss_pred             HHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchh--hHHHHHHHhcCcHH---HHHHHH
Q 037666           70 VEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDEC--IELLVKLIETDLYA---VALRLL  143 (375)
Q Consensus        70 ~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g--~t~Lh~A~~~~~~~---~v~~LL  143 (375)
                      .+++++|++.|.+. .  .....+++|.|+..|+.+++++|+++|+ ++.+|.+|  .||||.|..+...+   +++.++
T Consensus       321 ieiIK~LId~Ga~~-~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLI  397 (631)
T PHA02792        321 INVIKCMIDEGATL-Y--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCK  397 (631)
T ss_pred             HHHHHHHHHCCCcc-c--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHH
Confidence            34555555555543 1  2336678999999999999999999999 77777664  69999988766544   466667


Q ss_pred             hcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc-chhhHhhhcCCCCChhhhhHH
Q 037666          144 KDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV-PKKLAEAINTGGLTPTALFSE  204 (375)
Q Consensus       144 ~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L-~~~~~~~~n~~g~tpl~~a~~  204 (375)
                      +. |+++|.+|.+|.||||+|+..+...      .+..++ +|++++.+|..|+||+++|..
T Consensus       398 s~-GADIN~kD~~G~TPLh~Aa~~~n~e------ivelLLs~GADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        398 PY-IDDINKIDKHGRSILYYCIESHSVS------LVEWLIDNGADINITTKYGSTCIGICVI  452 (631)
T ss_pred             hc-CCccccccccCcchHHHHHHcCCHH------HHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            76 9999999999999999999887654      677777 789999999999999999865

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.78  E-value=7.1e-19  Score=151.81  Aligned_cols=140  Identities=20%  Similarity=0.200  Sum_probs=109.2

Q ss_pred             HhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccc
Q 037666            7 YDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMV   86 (375)
Q Consensus         7 L~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~   86 (375)
                      |.+..-|+|.- |..|.+|||+||+.||..+|+.|+..  |+-+|..|....||||+|+..||-++|+.|++..+++ +.
T Consensus        20 ld~tehdln~g-ddhgfsplhwaakegh~aivemll~r--garvn~tnmgddtplhlaaahghrdivqkll~~kadv-na   95 (448)
T KOG0195|consen   20 LDDTEHDLNVG-DDHGFSPLHWAAKEGHVAIVEMLLSR--GARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADV-NA   95 (448)
T ss_pred             ecCcccccccc-cccCcchhhhhhhcccHHHHHHHHhc--ccccccccCCCCcchhhhhhcccHHHHHHHHHHhccc-ch
Confidence            44555677776 78888899999888888888888888  7888888888888899988888888888888888886 78


Q ss_pred             cCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccc
Q 037666           87 PGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLAT  151 (375)
Q Consensus        87 ~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~  151 (375)
                      .|..|.||||+||..|...+.+-|+..|+ +++.+++|.|||..|-..- .+.+..+.++.|..+|
T Consensus        96 vnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l-~~~l~e~aek~gq~~n  160 (448)
T KOG0195|consen   96 VNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPML-KNTLLEIAEKHGQSPN  160 (448)
T ss_pred             hhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHH-HHHHHHHHHHhCCCCC
Confidence            88888889999888888888888888888 8888888888887764321 1222333344455444

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.77  E-value=1.1e-19  Score=156.89  Aligned_cols=133  Identities=19%  Similarity=0.134  Sum_probs=118.7

Q ss_pred             HHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHH
Q 037666           30 AQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVL  109 (375)
Q Consensus        30 ~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~  109 (375)
                      |+.|+.--|+.-|+.. ..|+|.-|..|.+|||+||+.|+..+++.|+.+|+.+ +..|....||||+|+.+|+.++|+.
T Consensus         8 cregna~qvrlwld~t-ehdln~gddhgfsplhwaakegh~aivemll~rgarv-n~tnmgddtplhlaaahghrdivqk   85 (448)
T KOG0195|consen    8 CREGNAFQVRLWLDDT-EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARV-NSTNMGDDTPLHLAAAHGHRDIVQK   85 (448)
T ss_pred             hhcCCeEEEEEEecCc-ccccccccccCcchhhhhhhcccHHHHHHHHhccccc-ccccCCCCcchhhhhhcccHHHHHH
Confidence            4455544445445543 6689999999999999999999999999999999997 8888888999999999999999999


Q ss_pred             HHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHH
Q 037666          110 LYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLA  165 (375)
Q Consensus       110 Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~  165 (375)
                      |++..+ ++..+..|+||||+||.-|+.++++.|+.. |+.++..|++|.|||..|.
T Consensus        86 ll~~kadvnavnehgntplhyacfwgydqiaedli~~-ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   86 LLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISC-GAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             HHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhc-cceeeecccCCCCchhhhc
Confidence            999998 999999999999999999999999999998 9999999999999999763

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.75  E-value=1.6e-17  Score=132.04  Aligned_cols=122  Identities=29%  Similarity=0.323  Sum_probs=109.9

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      |.+|.||||+|++.|+.+++++|++.  +.+.+..|..|.||+|+|+..++.++++.|++.+++. +..+..|.||+|.|
T Consensus         4 ~~~g~t~l~~a~~~~~~~~i~~li~~--~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~l~~a   80 (126)
T cd00204           4 DEDGRTPLHLAASNGHLEVVKLLLEN--GADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADV-NARDKDGNTPLHLA   80 (126)
T ss_pred             CcCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHH
Confidence            67899999999999999999999999  6666888999999999999999999999999998775 67788999999999


Q ss_pred             HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHH
Q 037666           99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLL  143 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL  143 (375)
                      +..++.+++++|++.+. .+..|..|.||++.|...++.+++++|+
T Consensus        81 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          81 ARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            99999999999999886 6677888999999999999998888764

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.73  E-value=3.1e-17  Score=123.16  Aligned_cols=87  Identities=33%  Similarity=0.436  Sum_probs=73.5

Q ss_pred             HHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHH
Q 037666           26 LHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQ  105 (375)
Q Consensus        26 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~  105 (375)
                      ||+|++.|+.++++.|++.  +.+++.    |+||||+|+..|+.+++++|++.+++. +.+|.+|.||||+|+.+|+.+
T Consensus         1 L~~A~~~~~~~~~~~ll~~--~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~   73 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEK--GADINL----GNTALHYAAENGNLEIVKLLLENGADI-NSQDKNGNTALHYAAENGNLE   73 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHT--TSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCT-T-BSTTSSBHHHHHHHTTHHH
T ss_pred             CHHHHHcCCHHHHHHHHHC--cCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccc-cccCCCCCCHHHHHHHcCCHH
Confidence            7899999999999999987  666655    888999999999999999999988886 788889999999999999999


Q ss_pred             HHHHHHHhcc-CCcc
Q 037666          106 TVVLLYEKTK-GSLT  119 (375)
Q Consensus       106 iv~~Ll~~~~-~~~~  119 (375)
                      ++++|+++++ ++.+
T Consensus        74 ~~~~Ll~~g~~~~~~   88 (89)
T PF12796_consen   74 IVKLLLEHGADVNIR   88 (89)
T ss_dssp             HHHHHHHTTT-TTSS
T ss_pred             HHHHHHHcCCCCCCc
Confidence            9999998876 5443

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.72  E-value=9.6e-18  Score=156.37  Aligned_cols=161  Identities=17%  Similarity=0.177  Sum_probs=138.7

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHH-------------cC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAG-------------SG   68 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~-------------~g   68 (375)
                      +++++|.++|++||.. |.+|+||||.|+.+||..++++|+++  ++++...|.+|..|+-.|..             .|
T Consensus        87 e~v~~l~e~ga~Vn~~-d~e~wtPlhaaascg~~~i~~~li~~--gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~g  163 (527)
T KOG0505|consen   87 EMVKFLVENGANVNAQ-DNEGWTPLHAAASCGYLNIVEYLIQH--GANLLAVNSDGNMPYDLAEDEATLDVLETEMARQG  163 (527)
T ss_pred             HHHHHHHHhcCCcccc-ccccCCcchhhcccccHHHHHHHHHh--hhhhhhccCCCCCccccccCcchhHHHHHHHHHhc
Confidence            6889999999999998 99999999999999999999999999  89998999999888754321             11


Q ss_pred             c-------------HHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcC
Q 037666           69 M-------------VEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETD  134 (375)
Q Consensus        69 ~-------------~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~  134 (375)
                      -             .+=++..+..|.+. ..++..|.|.||.|+.+|..++.++|++.+. ++.+|.+|+||||.|+.-|
T Consensus       164 i~iea~R~~~e~~ml~D~~q~l~~G~~~-d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg  242 (527)
T KOG0505|consen  164 IDIEAARKAEEQTMLDDARQWLNAGAEL-DARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWG  242 (527)
T ss_pred             ccHHHHhhhhHHHHHHHHHHHHhccccc-cccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhh
Confidence            1             11234445556554 6777779999999999999999999999999 9999999999999999999


Q ss_pred             cHHHHHHHHhcCCcccccccCCCCcHHHHHHHh
Q 037666          135 LYAVALRLLKDRPQLATKRDRNEETALHVLARK  167 (375)
Q Consensus       135 ~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~  167 (375)
                      +.++++.|+.+ +.+.+.+...|.||+.+|..-
T Consensus       243 ~~~~~elL~~~-ga~~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  243 QEDACELLVEH-GADMDAKTKMGETPLDVADEE  274 (527)
T ss_pred             hHhHHHHHHHh-hcccchhhhcCCCCccchhhh
Confidence            99999977776 999999999999999998764

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.70  E-value=1.7e-16  Score=126.16  Aligned_cols=117  Identities=26%  Similarity=0.311  Sum_probs=108.1

Q ss_pred             chhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHH
Q 037666           52 KKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKL  130 (375)
Q Consensus        52 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A  130 (375)
                      .+|.+|.||||+|+..|+.++++.|++.+++. ..++..|.+|+|.|+..++.+++++|++.++ .+..+..|.||+|.|
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a   80 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLA   80 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence            45688999999999999999999999999886 7789999999999999999999999999997 777788999999999


Q ss_pred             HhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCC
Q 037666          131 IETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLT  170 (375)
Q Consensus       131 ~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~  170 (375)
                      ++.++.+++++|+++ +.+.+..|..|.||+|.|...+..
T Consensus        81 ~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~l~~~~~~~~~  119 (126)
T cd00204          81 ARNGNLDVVKLLLKH-GADVNARDKDGRTPLHLAAKNGHL  119 (126)
T ss_pred             HHcCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcCCH
Confidence            999999999999997 788889999999999999998655

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.68  E-value=2.5e-16  Score=118.22  Aligned_cols=88  Identities=24%  Similarity=0.214  Sum_probs=79.6

Q ss_pred             HHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHH
Q 037666           61 FFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVA  139 (375)
Q Consensus        61 Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v  139 (375)
                      ||+|++.|+.++++.|++.+.++ +.    |+||||+|+.+|+.+++++|++.++ ++.+|.+|+||||.|+.+|+.+++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~-~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~   75 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADI-NL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV   75 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTT-TS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCC-CC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence            79999999999999999988776 32    8999999999999999999999998 888999999999999999999999


Q ss_pred             HHHHhcCCccccccc
Q 037666          140 LRLLKDRPQLATKRD  154 (375)
Q Consensus       140 ~~LL~~~~~~~~~~d  154 (375)
                      ++|+++ |.+++.+|
T Consensus        76 ~~Ll~~-g~~~~~~n   89 (89)
T PF12796_consen   76 KLLLEH-GADVNIRN   89 (89)
T ss_dssp             HHHHHT-TT-TTSS-
T ss_pred             HHHHHc-CCCCCCcC
Confidence            999988 88888776

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.64  E-value=1.6e-16  Score=157.87  Aligned_cols=188  Identities=20%  Similarity=0.165  Sum_probs=116.3

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhc-hhcCCChHHHHHHHcCcHHHHHHHHccC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAK-KNKIGCTAFFYAAGSGMVEIVEEAMKGN   80 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~   80 (375)
                      |.+++|...|+++..+ |+.|.+||.+|+..||..+|+.|+++  .++++. .|..+.|+|-+||..|+.++|++|+..+
T Consensus       771 e~vellv~rganiehr-dkkgf~plImaatagh~tvV~~llk~--ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~g  847 (2131)
T KOG4369|consen  771 EEVELLVVRGANIEHR-DKKGFVPLIMAATAGHITVVQDLLKA--HADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAG  847 (2131)
T ss_pred             HHHHHHHHhccccccc-ccccchhhhhhcccCchHHHHHHHhh--hhhhhhhcccccCceEEEecCCCcchHHHHHHHhh
Confidence            4555666666666655 66666666666666666666666666  455543 3555666666666666666666666666


Q ss_pred             CCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcc--cchhhHHHHHHHhcCcHHHHHHHHhcCCcccccc-cCC
Q 037666           81 KDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLT--DDECIELLVKLIETDLYAVALRLLKDRPQLATKR-DRN  156 (375)
Q Consensus        81 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~--d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~-d~~  156 (375)
                      ++- ..++-..+|||-+|...|..++++.|+..|. ++-+  .+.|..||++|..+|+...++.||+. |.++|.. ..+
T Consensus       848 ank-ehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~-gsdiNaqIeTN  925 (2131)
T KOG4369|consen  848 ANK-EHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQP-GSDINAQIETN  925 (2131)
T ss_pred             ccc-cccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcc-cchhccccccc
Confidence            653 4556666666666666666666666666665 4332  24456666666666666666666665 5555544 344


Q ss_pred             CCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhh
Q 037666          157 EETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTAL  201 (375)
Q Consensus       157 G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~  201 (375)
                      -||+|-+|+-.|++       +++.+|  ..+..+.+.+.|.|||.-
T Consensus       926 rnTaltla~fqgr~-------evv~lLLa~~anvehRaktgltplme  965 (2131)
T KOG4369|consen  926 RNTALTLALFQGRP-------EVVFLLLAAQANVEHRAKTGLTPLME  965 (2131)
T ss_pred             cccceeeccccCcc-------hHHHHHHHHhhhhhhhcccCCcccch
Confidence            55666666666666       666666  455666667777777754

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.61  E-value=5.3e-15  Score=130.04  Aligned_cols=125  Identities=25%  Similarity=0.245  Sum_probs=117.2

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCc-----HHHHHHHHccCC--CCccccCCCC
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGM-----VEIVEEAMKGNK--DIAMVPGGDG   91 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~-----~~iv~~Ll~~~~--~~~~~~d~~g   91 (375)
                      +..+.+++|.++..+..++++++++.  +.+++.+|.+|.||||+|+..|+     .++++.|++.+.  +....+|.+|
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g  147 (235)
T COG0666          70 DLDGRLPLHSAASKGDDKIVKLLLAS--GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG  147 (235)
T ss_pred             CccccCHHHHHHHcCcHHHHHHHHHc--CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence            56689999999999999999999999  88889999999999999999999     999999999999  5668889999


Q ss_pred             ChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           92 TLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        92 ~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      .||||+|+..|+.++++.|++.++ .+.++..|.|+++.|+..++.++++.++..
T Consensus       148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~  202 (235)
T COG0666         148 NTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDK  202 (235)
T ss_pred             CchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhc
Confidence            999999999999999999999998 788899999999999999999999998886

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.61  E-value=1.4e-15  Score=148.51  Aligned_cols=178  Identities=20%  Similarity=0.129  Sum_probs=141.2

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCC-------hhhHhchhcCCChHHHHHHH---cCcHHHHHHHHccCCCCccc----cC
Q 037666           23 NTALHVAAQANCIDFVKELLKMMS-------TEDLAKKNKIGCTAFFYAAG---SGMVEIVEEAMKGNKDIAMV----PG   88 (375)
Q Consensus        23 ~tpLh~A~~~g~~~~v~~Ll~~~~-------~~~~~~~d~~g~tpLh~Aa~---~g~~~iv~~Ll~~~~~~~~~----~d   88 (375)
                      +.++..|...+..+..+.++....       .-+++.+...|.|.||.|.-   .++-++++.|++.-|.+.+.    ..
T Consensus       102 ~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~ee  181 (782)
T KOG3676|consen  102 RDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEE  181 (782)
T ss_pred             hhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHh
Confidence            367888888888888877776521       13466777889999999986   45669999999988765332    23


Q ss_pred             CCCChHHHHHHHcCcHHHHHHHHHhcc-CCc---------ccc--------------hhhHHHHHHHhcCcHHHHHHHHh
Q 037666           89 GDGTLPIVRAAALGQRQTVVLLYEKTK-GSL---------TDD--------------ECIELLVKLIETDLYAVALRLLK  144 (375)
Q Consensus        89 ~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~---------~d~--------------~g~t~Lh~A~~~~~~~~v~~LL~  144 (375)
                      ..|+||||+|+.+.+.+.|++|++.++ ++.         .|.              -|+.||-.|+.-++.++++.|++
T Consensus       182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~  261 (782)
T KOG3676|consen  182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA  261 (782)
T ss_pred             hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence            469999999999999999999999988 443         121              37789999999999999999999


Q ss_pred             cCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhh--HhhhcCCCCChhhhhHHHHHH
Q 037666          145 DRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKL--AEAINTGGLTPTALFSEKHKE  208 (375)
Q Consensus       145 ~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~--~~~~n~~g~tpl~~a~~~~~~  208 (375)
                      + ++|++.+|.+|||.||..+..-..       +.-+++  .+++  ...+|+.|.||+-+|++..+.
T Consensus       262 ~-gAd~~aqDS~GNTVLH~lVi~~~~-------~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~  321 (782)
T KOG3676|consen  262 H-GADPNAQDSNGNTVLHMLVIHFVT-------EMYDLALELGANALEHVRNNQGLTPLTLAAKLGKK  321 (782)
T ss_pred             c-CCCCCccccCCChHHHHHHHHHHH-------HHHHHHHhcCCCccccccccCCCChHHHHHHhhhH
Confidence            7 999999999999999998877322       344433  5555  788999999999999876543

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.56  E-value=2e-15  Score=150.22  Aligned_cols=176  Identities=16%  Similarity=0.114  Sum_probs=155.0

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHH
Q 037666           18 ITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVR   97 (375)
Q Consensus        18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~   97 (375)
                      ...+-+|+|..||..||.|.|+.|+.+  |+++..+|+.|.+||.+|+-.||..+|+.|++..+++....|+.+.|+|-+
T Consensus       753 Te~n~~t~LT~acaggh~e~vellv~r--ganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSl  830 (2131)
T KOG4369|consen  753 TEPNIKTNLTSACAGGHREEVELLVVR--GANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSL  830 (2131)
T ss_pred             cCccccccccccccCccHHHHHHHHHh--cccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEE
Confidence            356778999999999999999999999  899999999999999999999999999999999999877889999999999


Q ss_pred             HHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccc--cCCCCcHHHHHHHhcCCCCCC
Q 037666           98 AAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKR--DRNEETALHVLARKNLTSSNQ  174 (375)
Q Consensus        98 Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~--d~~G~T~Lh~A~~~~~~~~~~  174 (375)
                      ||..|+.++|++|+..+. ...++-...|||.+|...|+.+++..||.. |..+|.+  .+.|-.||++|..+|+.    
T Consensus       831 acsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~-GseInSrtgSklgisPLmlatmngh~----  905 (2131)
T KOG4369|consen  831 ACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSS-GSEINSRTGSKLGISPLMLATMNGHQ----  905 (2131)
T ss_pred             ecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhc-ccccccccccccCcchhhhhhhcccc----
Confidence            999999999999999998 667888889999999999999999999998 8888877  57899999999999987    


Q ss_pred             Cccchhhcc--chhhHhhhc-CCCCChhhhhH
Q 037666          175 NPCGVENVV--PKKLAEAIN-TGGLTPTALFS  203 (375)
Q Consensus       175 ~~~~v~~~L--~~~~~~~~n-~~g~tpl~~a~  203 (375)
                         +..+.|  ++.++|..= .+.+|++-++.
T Consensus       906 ---~at~~ll~~gsdiNaqIeTNrnTaltla~  934 (2131)
T KOG4369|consen  906 ---AATLSLLQPGSDINAQIETNRNTALTLAL  934 (2131)
T ss_pred             ---HHHHHHhcccchhccccccccccceeecc
Confidence               555444  677777542 23456665543

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.56  E-value=1.7e-14  Score=103.73  Aligned_cols=103  Identities=21%  Similarity=0.233  Sum_probs=86.5

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCc
Q 037666           24 TALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQ  103 (375)
Q Consensus        24 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~  103 (375)
                      --..+++++|..+-|+.....  +.++|..- .|++|||+|+..|+.+++++|+..|+++ +.+|+.|-|||..|++.||
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~--g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i-~~kDKygITPLLsAvwEGH   79 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNE--GLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANI-QDKDKYGITPLLSAVWEGH   79 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHc--cccHHHHh-CCcccchHhhhcchHHHHHHHHHhcccc-CCccccCCcHHHHHHHHhh
Confidence            346788899999999998888  77777665 7899999999999999999999999997 8889999999999999999


Q ss_pred             HHHHHHHHHhcc-CCcccchhhHHHHHH
Q 037666          104 RQTVVLLYEKTK-GSLTDDECIELLVKL  130 (375)
Q Consensus       104 ~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A  130 (375)
                      .++|++|+++++ ...+..+|.+.+..+
T Consensus        80 ~~cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   80 RDCVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHHHHcCcccceeCCCchhHHhhc
Confidence            999999999988 556677777665443

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.49  E-value=5.2e-14  Score=94.87  Aligned_cols=54  Identities=35%  Similarity=0.532  Sum_probs=32.2

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHH
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAM   77 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll   77 (375)
                      |+||||+|++.|+.+++++|+++  +.+++.+|.+|+||||+|++.|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~--~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEH--GADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHT--TSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            56666666666666666666666  5666666666666666666666666666664

...

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.47  E-value=3.8e-14  Score=96.16  Aligned_cols=50  Identities=34%  Similarity=0.455  Sum_probs=25.2

Q ss_pred             cccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHH
Q 037666           12 DEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYA   64 (375)
Q Consensus        12 ~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~A   64 (375)
                      .+++.. |..|+||||+||..|+.+++++|++.  +.+++.+|.+|+||||+|
T Consensus         7 ~~~n~~-d~~G~T~LH~A~~~g~~~~v~~Ll~~--g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    7 ADVNAQ-DKYGNTPLHWAARYGHSEVVRLLLQN--GADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             --TT----TTS--HHHHHHHHT-HHHHHHHHHC--T--TT---TTS--HHHH-
T ss_pred             CCCcCc-CCCCCcHHHHHHHcCcHHHHHHHHHC--cCCCCCCcCCCCCHHHhC
Confidence            666666 77777777777777777777777755  677777777777777765

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.45  E-value=4.9e-13  Score=135.76  Aligned_cols=106  Identities=21%  Similarity=0.088  Sum_probs=91.1

Q ss_pred             HHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHH
Q 037666           60 AFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAV  138 (375)
Q Consensus        60 pLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~  138 (375)
                      +||.|+..|+.+.++.|++.++++ +.+|.+|.||||+|+.+|+.+++++|++.++ ++.+|.+|.||||+|+.+++.++
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadi-n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADP-NCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            478899999999999999999886 7889999999999999999999999999988 88889999999999999999999


Q ss_pred             HHHHHhc------CCcccccccCCCCcHHHHHHH
Q 037666          139 ALRLLKD------RPQLATKRDRNEETALHVLAR  166 (375)
Q Consensus       139 v~~LL~~------~~~~~~~~d~~G~T~Lh~A~~  166 (375)
                      ++.|+.+      .+.+.+..+.+|.+|+..+..
T Consensus       164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~~  197 (664)
T PTZ00322        164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDSP  197 (664)
T ss_pred             HHHHHhCCCcccccCCCCCccccCCCCccchhhh
Confidence            9988876      466667778888888776553

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.45  E-value=3.7e-13  Score=96.94  Aligned_cols=104  Identities=14%  Similarity=0.099  Sum_probs=92.1

Q ss_pred             ChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcH
Q 037666           58 CTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLY  136 (375)
Q Consensus        58 ~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~  136 (375)
                      .--+.|++++|..+-|+..+..+-++..  -..|++|||+|+..|+.+++++|+..++ ++.+|+.|.|||-.|++.||.
T Consensus         3 d~~~~W~vkNG~~DeVk~~v~~g~nVn~--~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~   80 (117)
T KOG4214|consen    3 DMSVAWNVKNGEIDEVKQSVNEGLNVNE--IYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHR   80 (117)
T ss_pred             chhHhhhhccCcHHHHHHHHHccccHHH--HhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhH
Confidence            3457899999999999999988866522  2489999999999999999999999999 888999999999999999999


Q ss_pred             HHHHHHHhcCCcccccccCCCCcHHHHH
Q 037666          137 AVALRLLKDRPQLATKRDRNEETALHVL  164 (375)
Q Consensus       137 ~~v~~LL~~~~~~~~~~d~~G~T~Lh~A  164 (375)
                      ++|+.||+. |++-..+--+|.+.+..+
T Consensus        81 ~cVklLL~~-GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   81 DCVKLLLQN-GADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHHHc-CcccceeCCCchhHHhhc
Confidence            999999998 888888888888877644

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.45  E-value=2.2e-13  Score=91.84  Aligned_cols=54  Identities=35%  Similarity=0.449  Sum_probs=44.5

Q ss_pred             CChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHH
Q 037666           57 GCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLY  111 (375)
Q Consensus        57 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll  111 (375)
                      |+||||+|++.|+.++++.|++.+.++ +.+|.+|+||||+|+.+|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~di-n~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADI-NAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGT-T-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            789999999999999999999999986 778999999999999999999999885

...

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.44  E-value=1.1e-12  Score=115.21  Aligned_cols=125  Identities=22%  Similarity=0.190  Sum_probs=112.6

Q ss_pred             HhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCc-----HHHHHHHHHhcc---CC-ccc
Q 037666           50 LAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQ-----RQTVVLLYEKTK---GS-LTD  120 (375)
Q Consensus        50 ~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~-----~~iv~~Ll~~~~---~~-~~d  120 (375)
                      ....+..+.+++|.++..+..+++++++..+.+. +.+|.+|.||||+|+..|+     .++++.|++.++   .. .+|
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~  144 (235)
T COG0666          66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD  144 (235)
T ss_pred             cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC
Confidence            4456677999999999999999999999999997 9999999999999999999     999999999998   33 358


Q ss_pred             chhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          121 DECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       121 ~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      .+|+||||+|+..|+.++++.++.. +.+++.+|..|.|++|.|+..+..       ++.+.+
T Consensus       145 ~~g~tpl~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~-------~~~~~l  199 (235)
T COG0666         145 EDGNTPLHWAALNGDADIVELLLEA-GADPNSRNSYGVTALDPAAKNGRI-------ELVKLL  199 (235)
T ss_pred             CCCCchhHHHHHcCchHHHHHHHhc-CCCCcccccCCCcchhhhcccchH-------HHHHHH
Confidence            9999999999999999999999998 999999999999999999999877       555555

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.44  E-value=1.1e-12  Score=113.74  Aligned_cols=121  Identities=17%  Similarity=0.099  Sum_probs=112.2

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHH
Q 037666           21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAA  100 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~  100 (375)
                      .-+.||.-++..|+.+-...||+.  -..+|.+|..|.|||..|+..|+.++|+.|++.|+|+...++..++||||.|+.
T Consensus        11 ~~~~~Lle~i~Kndt~~a~~LLs~--vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAAL   88 (396)
T KOG1710|consen   11 APKSPLLEAIDKNDTEAALALLST--VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAAL   88 (396)
T ss_pred             chhhHHHHHHccCcHHHHHHHHHH--hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHH
Confidence            346899999999999999999988  678999999999999999999999999999999999988888899999999999


Q ss_pred             cCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHH
Q 037666          101 LGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLL  143 (375)
Q Consensus       101 ~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL  143 (375)
                      .|+.++.+.|++.|. ....+.-|+|+-..|+.-|+.++|..+=
T Consensus        89 SGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iIN  132 (396)
T KOG1710|consen   89 SGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIIN  132 (396)
T ss_pred             cCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence            999999999999999 8888999999999999999999886543

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.42  E-value=3.9e-13  Score=136.49  Aligned_cols=103  Identities=20%  Similarity=0.122  Sum_probs=91.5

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcH
Q 037666           25 ALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQR  104 (375)
Q Consensus        25 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~  104 (375)
                      .|+.|+..|+.+.++.|++.  +.++|.+|.+|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..|+.
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~--Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~~  161 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTG--GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEENGFR  161 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCcH
Confidence            58899999999999999999  8999999999999999999999999999999999996 88999999999999999999


Q ss_pred             HHHHHHHHh-------cc-CCcccchhhHHHHHH
Q 037666          105 QTVVLLYEK-------TK-GSLTDDECIELLVKL  130 (375)
Q Consensus       105 ~iv~~Ll~~-------~~-~~~~d~~g~t~Lh~A  130 (375)
                      +++++|+++       ++ .+..+..|.+|+..+
T Consensus       162 ~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        162 EVVQLLSRHSQCHFELGANAKPDSFTGKPPSLED  195 (664)
T ss_pred             HHHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence            999999998       44 444555565555433

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.42  E-value=1.4e-13  Score=93.40  Aligned_cols=56  Identities=29%  Similarity=0.387  Sum_probs=31.9

Q ss_pred             HHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           41 LLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        41 Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      ||++. +.+++.+|..|+||||+|++.|+.+++++|++.+.+. +.+|.+|+||||+|
T Consensus         1 LL~~~-~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~-~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHG-PADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADP-NAKDKDGQTPLHYA   56 (56)
T ss_dssp             ------T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--T-T---TTS--HHHH-
T ss_pred             CCccC-cCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCC-CCCcCCCCCHHHhC
Confidence            46663 4889999999999999999999999999999888886 88999999999987

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.33  E-value=3.2e-12  Score=119.05  Aligned_cols=115  Identities=22%  Similarity=0.139  Sum_probs=98.2

Q ss_pred             HHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHH
Q 037666           27 HVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQT  106 (375)
Q Consensus        27 h~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~i  106 (375)
                      .=|+..|.+|+|+.++..  -.|....|.+|-|+||-|+-.||.+||++|++.|.++ +..|.+|+||||+|+..+++.+
T Consensus       555 LDaaLeGEldlVq~~i~e--v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganV-Na~DSdGWTPLHCAASCNnv~~  631 (752)
T KOG0515|consen  555 LDAALEGELDLVQRIIYE--VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANV-NAADSDGWTPLHCAASCNNVPM  631 (752)
T ss_pred             HhhhhcchHHHHHHHHHh--hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcc-cCccCCCCchhhhhhhcCchHH
Confidence            347889999999999988  5788899999999999999999999999999999997 9999999999999999999999


Q ss_pred             HHHHHHhcc-CCc-ccchhhHHHHHHH--hcCcHHHHHHHHh
Q 037666          107 VVLLYEKTK-GSL-TDDECIELLVKLI--ETDLYAVALRLLK  144 (375)
Q Consensus       107 v~~Ll~~~~-~~~-~d~~g~t~Lh~A~--~~~~~~~v~~LL~  144 (375)
                      ++.|.+.|+ +.. .-.++.|+..-+-  +.|+.++.++|-.
T Consensus       632 ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  632 CKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            999999998 333 3456677765543  3567777777653

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.27  E-value=1.6e-11  Score=106.60  Aligned_cols=100  Identities=19%  Similarity=0.260  Sum_probs=90.7

Q ss_pred             CccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhc-hhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccC
Q 037666           10 YEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAK-KNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPG   88 (375)
Q Consensus        10 ~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d   88 (375)
                      .-.++|.. |++|-|||..|+..|+.++|+.|++.  ++|+|. ++..++||||+|+.+|+.++.+.|++.|+.. ...|
T Consensus        34 ~vr~vn~~-D~sGMs~LahAaykGnl~~v~lll~~--gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~-~~vN  109 (396)
T KOG1710|consen   34 TVRQVNQR-DPSGMSVLAHAAYKGNLTLVELLLEL--GADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARM-YLVN  109 (396)
T ss_pred             Hhhhhhcc-CCCcccHHHHHHhcCcHHHHHHHHHh--CCCcCcccccccccHHHHHHHcCCchHHHHHHhccCcc-cccc
Confidence            35568887 99999999999999999999999999  899885 5678999999999999999999999999985 8899


Q ss_pred             CCCChHHHHHHHcCcHHHHHHHHHh
Q 037666           89 GDGTLPIVRAAALGQRQTVVLLYEK  113 (375)
Q Consensus        89 ~~g~tpLh~Aa~~g~~~iv~~Ll~~  113 (375)
                      .-|+|+-.+|+.-|+.++|..+-.+
T Consensus       110 svgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen  110 SVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             chhhhHHHHHHHhcchHHHHHHhcc
Confidence            9999999999999999988877443

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.24  E-value=1.8e-11  Score=114.10  Aligned_cols=99  Identities=21%  Similarity=0.219  Sum_probs=85.3

Q ss_pred             ccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCC
Q 037666           13 EIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGT   92 (375)
Q Consensus        13 ~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~   92 (375)
                      |.... +.+|-|+||-|+-.||.+||++|++.  ++++|..|.+||||||+|+..+++.+++.|++.|+-+....-.++.
T Consensus       575 DpSqp-NdEGITaLHNAiCaghyeIVkFLi~~--ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDme  651 (752)
T KOG0515|consen  575 DPSQP-NDEGITALHNAICAGHYEIVKFLIEF--GANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDME  651 (752)
T ss_pred             CCCCC-CccchhHHhhhhhcchhHHHHHHHhc--CCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeeccccc
Confidence            44454 77899999999999999999999999  9999999999999999999999999999999999876555567788


Q ss_pred             hHHHHH--HHcCcHHHHHHHHHhc
Q 037666           93 LPIVRA--AALGQRQTVVLLYEKT  114 (375)
Q Consensus        93 tpLh~A--a~~g~~~iv~~Ll~~~  114 (375)
                      |+..-+  .+.|..++.+||....
T Consensus       652 Ta~eKCee~eeGY~~CsqyL~~vq  675 (752)
T KOG0515|consen  652 TAAEKCEEMEEGYDQCSQYLYGVQ  675 (752)
T ss_pred             chhhhcchhhhhHHHHHHHHHHHH
Confidence            887653  3467888889987544

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.97  E-value=1.8e-09  Score=101.74  Aligned_cols=102  Identities=20%  Similarity=0.168  Sum_probs=70.7

Q ss_pred             ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCC
Q 037666           11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGD   90 (375)
Q Consensus        11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~   90 (375)
                      |.++-.+ +++.+|.||+|+..|+-|+|+|+|++.+++.++..|..|.|+||-|+..++-.+.++|++.|+.+ ...|..
T Consensus       889 gg~ll~~-~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl-~ktd~k  966 (1004)
T KOG0782|consen  889 GGSLLIQ-GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASL-RKTDSK  966 (1004)
T ss_pred             CCceEee-CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhh-eecccC
Confidence            4444444 66677777777777777777777777655566777777777777777777777777777777765 666777


Q ss_pred             CChHHHHHHHcCcHHHHHHHHHhc
Q 037666           91 GTLPIVRAAALGQRQTVVLLYEKT  114 (375)
Q Consensus        91 g~tpLh~Aa~~g~~~iv~~Ll~~~  114 (375)
                      |.||-..|-+.|..|...||-.+.
T Consensus       967 g~tp~eraqqa~d~dlaayle~rq  990 (1004)
T KOG0782|consen  967 GKTPQERAQQAGDPDLAAYLESRQ  990 (1004)
T ss_pred             CCChHHHHHhcCCchHHHHHhhhh
Confidence            777777777777777776665443

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.89  E-value=9.5e-10  Score=107.80  Aligned_cols=94  Identities=21%  Similarity=0.290  Sum_probs=77.4

Q ss_pred             HHHHHhhCcccc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhc-CCChHHHHHHHcCcHHHHHHHHccC
Q 037666            3 AKDIYDKYEDEI-GQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNK-IGCTAFFYAAGSGMVEIVEEAMKGN   80 (375)
Q Consensus         3 v~~lL~~~~~~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~-~g~tpLh~Aa~~g~~~iv~~Ll~~~   80 (375)
                      ++.++.+++.+. |.+ |..|+|+||+|+..|..+++++|+++  |.+++.+|. .|+||||-|...|+++++-.|+++|
T Consensus        33 lk~F~~k~c~n~anik-D~~GR~alH~~~S~~k~~~l~wLlqh--Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g  109 (1267)
T KOG0783|consen   33 LKGFSEKSCQNLANIK-DRYGRTALHIAVSENKNSFLRWLLQH--GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKG  109 (1267)
T ss_pred             HHHHHHHhhhhhhhHH-HhhccceeeeeeccchhHHHHHHHhc--CceeeeccccccchHhhHhhhhchHHHHHHHHhcC
Confidence            345555555554 554 88899999999999999999999999  888888885 5899999999999999999999998


Q ss_pred             CCCccccCCCCChHHHHHHH
Q 037666           81 KDIAMVPGGDGTLPIVRAAA  100 (375)
Q Consensus        81 ~~~~~~~d~~g~tpLh~Aa~  100 (375)
                      ..+ .++|++|..||..-++
T Consensus       110 ~SL-~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  110 RSL-RIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             Cce-EEecccCCCHHHHHhh
Confidence            886 8889999999887766

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.79  E-value=3e-09  Score=104.33  Aligned_cols=94  Identities=20%  Similarity=0.210  Sum_probs=70.6

Q ss_pred             HHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCC-CCChHHHHHHHcCcHHHHHHHHHhcc-
Q 037666           38 VKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGG-DGTLPIVRAAALGQRQTVVLLYEKTK-  115 (375)
Q Consensus        38 v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~-~g~tpLh~Aa~~g~~~iv~~Ll~~~~-  115 (375)
                      ++-.++...+...|++|..|+|+||+|+..|..++++.|+++|.++ ..+|. .|.||||.|+.+|+.|++..|+.++. 
T Consensus        33 lk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv-~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S  111 (1267)
T KOG0783|consen   33 LKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDV-FVQDEESGYTALHRAIYYGNIDCASLLLSKGRS  111 (1267)
T ss_pred             HHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCcee-eeccccccchHhhHhhhhchHHHHHHHHhcCCc
Confidence            3444443324557788888888888888888888888888888886 55554 58888888888888888888888887 


Q ss_pred             CCcccchhhHHHHHHHh
Q 037666          116 GSLTDDECIELLVKLIE  132 (375)
Q Consensus       116 ~~~~d~~g~t~Lh~A~~  132 (375)
                      ..+.|++|..||..-++
T Consensus       112 L~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  112 LRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             eEEecccCCCHHHHHhh
Confidence            67788888888877665

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.75  E-value=7e-09  Score=95.97  Aligned_cols=91  Identities=23%  Similarity=0.181  Sum_probs=57.8

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHc
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAAL  101 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~  101 (375)
                      +..++.+|++.|++..++.+.-.  +.|++.+|.+.+|+||.||..|+++++|+|++....-++.+|+-|+|||.-|...
T Consensus       506 ~~i~~~~aa~~GD~~alrRf~l~--g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F  583 (622)
T KOG0506|consen  506 TVINVMYAAKNGDLSALRRFALQ--GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF  583 (622)
T ss_pred             chhhhhhhhhcCCHHHHHHHHHh--cccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence            44556666666666666666555  5666666666666666666666666666666655444456666666666666666


Q ss_pred             CcHHHHHHHHHhc
Q 037666          102 GQRQTVVLLYEKT  114 (375)
Q Consensus       102 g~~~iv~~Ll~~~  114 (375)
                      +|.+++++|-+..
T Consensus       584 ~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  584 KHKEVVKLLEEAQ  596 (622)
T ss_pred             CcHHHHHHHHHHh
Confidence            6666666665543

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.75  E-value=3.5e-08  Score=93.21  Aligned_cols=114  Identities=16%  Similarity=0.103  Sum_probs=95.3

Q ss_pred             HHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc---CCcccchhhHHHHHHHhcCcHH
Q 037666           61 FFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK---GSLTDDECIELLVKLIETDLYA  137 (375)
Q Consensus        61 Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~---~~~~d~~g~t~Lh~A~~~~~~~  137 (375)
                      +.-|+..+..--++..-..|.++ ..++.+.++.||+|+..|+.|+|+|++++++   .++.|..|+|.||-|+..++..
T Consensus       870 il~av~~~D~~klqE~h~~gg~l-l~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~  948 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSL-LIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA  948 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCce-EeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence            34455555554455555667776 7889999999999999999999999999999   5667899999999999999999


Q ss_pred             HHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          138 VALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       138 ~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      +..+|++. |+.....|..|.||-.-|-+.+.+       +...+|
T Consensus       949 vc~~lvda-gasl~ktd~kg~tp~eraqqa~d~-------dlaayl  986 (1004)
T KOG0782|consen  949 VCQLLVDA-GASLRKTDSKGKTPQERAQQAGDP-------DLAAYL  986 (1004)
T ss_pred             HHHHHHhc-chhheecccCCCChHHHHHhcCCc-------hHHHHH
Confidence            98888887 888889999999999999998888       666666

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.66  E-value=6.9e-08  Score=89.93  Aligned_cols=91  Identities=20%  Similarity=0.154  Sum_probs=80.9

Q ss_pred             CCCCCc------HHHHHHHcCCHHHHHHHHHcCChhhHhchhc-CCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCC
Q 037666           19 TNLGNT------ALHVAAQANCIDFVKELLKMMSTEDLAKKNK-IGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDG   91 (375)
Q Consensus        19 d~~g~t------pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~-~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g   91 (375)
                      |.+|.|      -||..++.|+.|..-.||..  |+++|..+. .|.||||.|++.|+..-+++|+-.|+|. ..+|.+|
T Consensus       124 DdD~~~~~~LsrQLhasvRt~nlet~LRll~l--GA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~-~a~d~~G  200 (669)
T KOG0818|consen  124 DDDSVTAKDLSKQLHSSVRTGNLETCLRLLSL--GAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADP-GAQDSSG  200 (669)
T ss_pred             CcchhhHHHHHHHHHHHhhcccHHHHHHHHHc--ccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCC-CCCCCCC
Confidence            555554      49999999999999999999  899998874 5999999999999999999999999996 9999999


Q ss_pred             ChHHHHHHHcCcHHHHHHHHH
Q 037666           92 TLPIVRAAALGQRQTVVLLYE  112 (375)
Q Consensus        92 ~tpLh~Aa~~g~~~iv~~Ll~  112 (375)
                      .||+.+|-..||.++.+-|++
T Consensus       201 mtP~~~AR~~gH~~laeRl~e  221 (669)
T KOG0818|consen  201 MTPVDYARQGGHHELAERLVE  221 (669)
T ss_pred             CcHHHHHHhcCchHHHHHHHH
Confidence            999999999999877666654

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.64  E-value=6.1e-08  Score=91.32  Aligned_cols=91  Identities=20%  Similarity=0.256  Sum_probs=76.1

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCc
Q 037666           24 TALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQ  103 (375)
Q Consensus        24 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~  103 (375)
                      -|||+++-....+-....+.......++..|..|+||||.|+..|+.+.++.|+..+++. ..+|++|++|||.|+..|+
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv-~~kN~~gWs~L~EAv~~g~  100 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADV-SIKNNEGWSPLHEAVSTGN  100 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCc-cccccccccHHHHHHHcCC
Confidence            359999988877666655444224568899999999999999999999999999999996 8899999999999999999


Q ss_pred             HHHHHHHHHhcc
Q 037666          104 RQTVVLLYEKTK  115 (375)
Q Consensus       104 ~~iv~~Ll~~~~  115 (375)
                      .+++..++.+-.
T Consensus       101 ~q~i~~vlr~~~  112 (560)
T KOG0522|consen  101 EQIITEVLRHLK  112 (560)
T ss_pred             HHHHHHHHHHhH
Confidence            988877776543

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.64  E-value=2.2e-08  Score=92.81  Aligned_cols=91  Identities=19%  Similarity=0.079  Sum_probs=82.9

Q ss_pred             hcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc--CCcccchhhHHHHHHH
Q 037666           54 NKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK--GSLTDDECIELLVKLI  131 (375)
Q Consensus        54 d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~--~~~~d~~g~t~Lh~A~  131 (375)
                      +.++..++++|++.|.+..++.+.-.+.|+ +.+|.+.+|+||.|+..|+.+++++|++.+.  .+.+|..|+|||.-|.
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~-~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~  581 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDL-ETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK  581 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccc-cccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence            456778899999999999999988889997 8899999999999999999999999999998  6679999999999999


Q ss_pred             hcCcHHHHHHHHhc
Q 037666          132 ETDLYAVALRLLKD  145 (375)
Q Consensus       132 ~~~~~~~v~~LL~~  145 (375)
                      .-+|.+++++|-+.
T Consensus       582 ~F~h~~v~k~L~~~  595 (622)
T KOG0506|consen  582 HFKHKEVVKLLEEA  595 (622)
T ss_pred             hcCcHHHHHHHHHH
Confidence            99999999877654

>PF13606 Ank_3: Ankyrin repeat

Probab=98.62  E-value=3e-08  Score=57.47  Aligned_cols=26  Identities=35%  Similarity=0.497  Sum_probs=13.0

Q ss_pred             CChHHHHHHHcCcHHHHHHHHccCCC
Q 037666           57 GCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus        57 g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      |+||||+|++.|+.+++++|++.+++
T Consensus         2 G~T~Lh~A~~~g~~e~v~~Ll~~gad   27 (30)
T PF13606_consen    2 GNTPLHLAASNGNIEIVKYLLEHGAD   27 (30)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence            44555555555555555555554444

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.58  E-value=5e-08  Score=58.15  Aligned_cols=27  Identities=41%  Similarity=0.556  Sum_probs=13.8

Q ss_pred             CChHHHHHHHcCcHHHHHHHHccCCCC
Q 037666           57 GCTAFFYAAGSGMVEIVEEAMKGNKDI   83 (375)
Q Consensus        57 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~   83 (375)
                      |+||||+|+..|+.+++++|++.++++
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~   28 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLKHGADI   28 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred             cccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence            445555555555555555555555443

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF13606 Ank_3: Ankyrin repeat

Probab=98.56  E-value=7.5e-08  Score=55.81  Aligned_cols=23  Identities=52%  Similarity=0.693  Sum_probs=14.1

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHc
Q 037666           22 GNTALHVAAQANCIDFVKELLKM   44 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~   44 (375)
                      |+||||+||+.|+.|++++|+++
T Consensus         2 G~T~Lh~A~~~g~~e~v~~Ll~~   24 (30)
T PF13606_consen    2 GNTPLHLAASNGNIEIVKYLLEH   24 (30)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHHc
Confidence            55666666666666666666655

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.55  E-value=2.2e-07  Score=86.59  Aligned_cols=94  Identities=17%  Similarity=0.101  Sum_probs=82.1

Q ss_pred             chhcCCChH------HHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhh
Q 037666           52 KKNKIGCTA------FFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECI  124 (375)
Q Consensus        52 ~~d~~g~tp------Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~  124 (375)
                      .+|.+|.|.      ||-.++.|+.+..-.|+..|++....--..|.||||+|++.|+.--+++|+-.|+ +...|.+|.
T Consensus       122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~Gm  201 (669)
T KOG0818|consen  122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGM  201 (669)
T ss_pred             CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCC
Confidence            456677665      8999999999999999999999755555679999999999999999999999999 888999999


Q ss_pred             HHHHHHHhcCcHHHHHHHHhc
Q 037666          125 ELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus       125 t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      ||+.+|-..||.++.+.|++.
T Consensus       202 tP~~~AR~~gH~~laeRl~e~  222 (669)
T KOG0818|consen  202 TPVDYARQGGHHELAERLVEI  222 (669)
T ss_pred             cHHHHHHhcCchHHHHHHHHH
Confidence            999999999998887776653

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.55  E-value=9.5e-08  Score=56.93  Aligned_cols=32  Identities=47%  Similarity=0.537  Sum_probs=25.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchh
Q 037666           21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKN   54 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d   54 (375)
                      +|+||||+|+..|+.+++++|+++  +++++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~--ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKH--GADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHT--TSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHC--cCCCCCCC
Confidence            478888888888888888888887  77777665

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.40  E-value=4.8e-07  Score=85.40  Aligned_cols=71  Identities=24%  Similarity=0.329  Sum_probs=63.2

Q ss_pred             HhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccC
Q 037666            7 YDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGN   80 (375)
Q Consensus         7 L~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~   80 (375)
                      +.+....++.. |..|+||||+|+..||.+.++.|+..  ++++..+|.+|++|||-|+..|+.+++..++.+.
T Consensus        41 ~~~~~~~id~~-D~~g~TpLhlAV~Lg~~~~a~~Ll~a--~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~  111 (560)
T KOG0522|consen   41 LAKVSLVIDRR-DPPGRTPLHLAVRLGHVEAARILLSA--GADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHL  111 (560)
T ss_pred             hhhhhceeccc-cCCCCccHHHHHHhcCHHHHHHHHhc--CCCccccccccccHHHHHHHcCCHHHHHHHHHHh
Confidence            33444567776 99999999999999999999999999  8999999999999999999999999998888764

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.38  E-value=4.8e-05  Score=76.18  Aligned_cols=117  Identities=16%  Similarity=0.153  Sum_probs=95.4

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCh--hhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           21 LGNTALHVAAQANCIDFVKELLKMMST--EDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~--~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      .+.--.-.|++.|+...|+..++....  -++|..|.-|+++||.|+.+.|.++++.|++...+.        ..+|.+|
T Consensus        24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~a   95 (822)
T KOG3609|consen   24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLA   95 (822)
T ss_pred             hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHH
Confidence            344556789999999999999988633  357889999999999999999999999999886442        5688999


Q ss_pred             HHcCcHHHHHHHHHhcc-C-C---c------ccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           99 AALGQRQTVVLLYEKTK-G-S---L------TDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~-~---~------~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      +..|.++.|+.++.+.. . .   .      .-..+.||+.+|+..+++|+++.||++
T Consensus        96 I~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~k  153 (822)
T KOG3609|consen   96 IAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTR  153 (822)
T ss_pred             HHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHc
Confidence            99999999999988765 1 1   1      123467999999999999999999988

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.36  E-value=1.1e-06  Score=83.62  Aligned_cols=89  Identities=22%  Similarity=0.203  Sum_probs=69.6

Q ss_pred             HHHHHHcCCHHHHHHHHHcCChhhHhc--hhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCc
Q 037666           26 LHVAAQANCIDFVKELLKMMSTEDLAK--KNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQ  103 (375)
Q Consensus        26 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~--~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~  103 (375)
                      |.-|+...++..+-.||.+.....+|.  .+.+|+|+||+||+.|++.+.++|+-++.|. ..+|.+|+|+|.+|-+.|.
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv-~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDV-MARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccc-eecccCCchhhhhHhhccc
Confidence            455666667777777887753344443  3567788899998888888888888888886 7888888888888888888


Q ss_pred             HHHHHHHHHhcc
Q 037666          104 RQTVVLLYEKTK  115 (375)
Q Consensus       104 ~~iv~~Ll~~~~  115 (375)
                      .+++..|+++|.
T Consensus       707 qec~d~llq~gc  718 (749)
T KOG0705|consen  707 QECIDVLLQYGC  718 (749)
T ss_pred             HHHHHHHHHcCC
Confidence            888888888876

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=98.25  E-value=8.5e-07  Score=90.14  Aligned_cols=147  Identities=10%  Similarity=-0.003  Sum_probs=108.3

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      ...|.|-||+++..++.-.++.+++.. +..-...|.+|...+|+ |..++.+..-+++.......+.+|.+|+||||+|
T Consensus       571 ~~r~~lllhL~a~~lyawLie~~~e~~-~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wA  648 (975)
T KOG0520|consen  571 NFRDMLLLHLLAELLYAWLIEKVIEWA-GSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWA  648 (975)
T ss_pred             CCcchHHHHHHHHHhHHHHHHHHhccc-ccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchH
Confidence            567999999999999999999999863 44555677888888888 5556677776666655544589999999999999


Q ss_pred             HHcCcHHHHHHHHHhcc-CC------cccchhhHHHHHHHhcCcHHHHHHHHhc----CCccc--ccccCCCCcHHHHHH
Q 037666           99 AALGQRQTVVLLYEKTK-GS------LTDDECIELLVKLIETDLYAVALRLLKD----RPQLA--TKRDRNEETALHVLA  165 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~------~~d~~g~t~Lh~A~~~~~~~~v~~LL~~----~~~~~--~~~d~~G~T~Lh~A~  165 (375)
                      +.+|+..++..|++.++ ..      .....|.|+-..|..+|+..+..+|-+.    .-.+.  ...+.-+++|..-|.
T Consensus       649 a~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~~~~~~~~~~~~~~s~~~~~~~~~  728 (975)
T KOG0520|consen  649 AFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALSAHLSNLELADPNLSADSEEDKAE  728 (975)
T ss_pred             hhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHHHHHhhccccccccCCCchhhhhh
Confidence            99999999999997776 21      2345688999999999988887666543    01111  111333667777666


Q ss_pred             Hh
Q 037666          166 RK  167 (375)
Q Consensus       166 ~~  167 (375)
                      +.
T Consensus       729 ~t  730 (975)
T KOG0520|consen  729 KT  730 (975)
T ss_pred             hc
Confidence            65

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.21  E-value=2.1e-06  Score=81.66  Aligned_cols=76  Identities=22%  Similarity=0.246  Sum_probs=64.5

Q ss_pred             HHHhhCccc--cc-cccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            5 DIYDKYEDE--IG-QEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         5 ~lL~~~~~~--~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      .+|..||..  +| ...+.+|+|+||+||+.|+..+.+.|+=+  +.|+..+|..|+|+|.||-+.|..+++..|+++|.
T Consensus       641 ~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWy--g~dv~~rda~g~t~l~yar~a~sqec~d~llq~gc  718 (749)
T KOG0705|consen  641 ILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWY--GVDVMARDAHGRTALFYARQAGSQECIDVLLQYGC  718 (749)
T ss_pred             HHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHh--CccceecccCCchhhhhHhhcccHHHHHHHHHcCC
Confidence            456667653  33 22366789999999999999999999966  89999999999999999999999999999999875


Q ss_pred             C
Q 037666           82 D   82 (375)
Q Consensus        82 ~   82 (375)
                      .
T Consensus       719 p  719 (749)
T KOG0705|consen  719 P  719 (749)
T ss_pred             C
Confidence            3

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.21  E-value=0.00068  Score=68.21  Aligned_cols=103  Identities=20%  Similarity=0.208  Sum_probs=83.7

Q ss_pred             HHHHHhhCc---cccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHcc
Q 037666            3 AKDIYDKYE---DEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG   79 (375)
Q Consensus         3 v~~lL~~~~---~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~   79 (375)
                      |++.|....   .++|+. |+-|+++||.|+.+.+.|+++.|+++  +...       ..+|-+|++.|.++.|+.++..
T Consensus        41 V~k~l~~~~~~~lninc~-d~lGr~al~iai~nenle~~eLLl~~--~~~~-------gdALL~aI~~~~v~~VE~ll~~  110 (822)
T KOG3609|consen   41 VAKALEYKAVSKLNINCR-DPLGRLALHIAIDNENLELQELLLDT--SSEE-------GDALLLAIAVGSVPLVELLLVH  110 (822)
T ss_pred             HHHHHHhccccccchhcc-ChHhhhceecccccccHHHHHHHhcC--cccc-------chHHHHHHHHHHHHHHHHHHhc
Confidence            566666554   477887 99999999999999999999999999  4433       4789999999999999999986


Q ss_pred             CCCCc---------cccCCCCChHHHHHHHcCcHHHHHHHHHhcc
Q 037666           80 NKDIA---------MVPGGDGTLPIVRAAALGQRQTVVLLYEKTK  115 (375)
Q Consensus        80 ~~~~~---------~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~  115 (375)
                      .....         ...-..+-|||.+||..++.|+++.|++++.
T Consensus       111 ~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~  155 (822)
T KOG3609|consen  111 FVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH  155 (822)
T ss_pred             ccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence            43321         1122346799999999999999999999887

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=98.17  E-value=1.6e-06  Score=88.61  Aligned_cols=84  Identities=23%  Similarity=0.297  Sum_probs=57.2

Q ss_pred             cCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhc
Q 037666           55 KIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIET  133 (375)
Q Consensus        55 ~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~  133 (375)
                      ..|.|+||.|+..|...++++|++.++++ +..|..|+||+|.+...|+...+..++++++ .+..+.+|.++|++|...
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~v-n~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGADV-NALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCcc-hhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence            34667777777777777777777777664 6677777777777777777777777777666 666667777777777665


Q ss_pred             CcHHHH
Q 037666          134 DLYAVA  139 (375)
Q Consensus       134 ~~~~~v  139 (375)
                      .+.+++
T Consensus       733 ~~~d~~  738 (785)
T KOG0521|consen  733 ANADIV  738 (785)
T ss_pred             ccccHH
Confidence            544444

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.99  E-value=1e-05  Score=73.56  Aligned_cols=77  Identities=16%  Similarity=0.129  Sum_probs=63.9

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcC
Q 037666           23 NTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALG  102 (375)
Q Consensus        23 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g  102 (375)
                      .--|..||+.|+.+.|++|++.  |.++|..|.-.++||.+|+-.||.++||+|+++|+-+ ..-.-+|.-. |+++.+.
T Consensus        37 f~elceacR~GD~d~v~~LVet--gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC-~rdtf~G~RC-~YgaLnd  112 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVET--GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC-SRDTFDGDRC-HYGALND  112 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHh--CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc-cccccCcchh-hhhhhhH
Confidence            4568999999999999999998  8999999999999999999999999999999999864 4333455444 5555554


Q ss_pred             c
Q 037666          103 Q  103 (375)
Q Consensus       103 ~  103 (375)
                      +
T Consensus       113 ~  113 (516)
T KOG0511|consen  113 R  113 (516)
T ss_pred             H
Confidence            4

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.96  E-value=1.1e-05  Score=66.52  Aligned_cols=69  Identities=22%  Similarity=0.211  Sum_probs=58.6

Q ss_pred             ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCh-hhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666           11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMST-EDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus        11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~-~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      +.++|.. |..|+|||+.|+..|..+.+.+|+++  + +.+...|..|.+++-+|-+.|..++++.|.+...+
T Consensus         2 e~~in~r-D~fgWTalmcaa~eg~~eavsyllgr--g~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen    2 EGNINAR-DAFGWTALMCAAMEGSNEAVSYLLGR--GVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE   71 (223)
T ss_pred             CCCccch-hhhcchHHHHHhhhcchhHHHHHhcc--CcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence            4567887 88899999999999999999999988  6 78888888999999999999999988888877554

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.94  E-value=9e-06  Score=83.14  Aligned_cols=132  Identities=20%  Similarity=0.080  Sum_probs=97.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHH
Q 037666           21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAA  100 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~  100 (375)
                      +|.+.+|+.+.    +..+.++.-  .......+.+|.+++-.|...-+-..+...         ..-..|.|+||.|+.
T Consensus       601 ~~~~~~h~e~~----~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~---------~~~~~~~s~lh~a~~  665 (785)
T KOG0521|consen  601 DGSTTLHYEIL----ECLKLLLFI--KELLVKASSDGECLPRIATALAHGCCENWP---------VVLCIGCSLLHVAVG  665 (785)
T ss_pred             ccccccchhhh----hccccccch--HHHHHHhccCccchhhhhhhhcchhhhccc---------hhhhcccchhhhhhc
Confidence            56777888764    111112211  233334445677777766654332222111         123468899999999


Q ss_pred             cCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhc
Q 037666          101 LGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKN  168 (375)
Q Consensus       101 ~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~  168 (375)
                      .|...++++|++.++ ++..|..|++|+|.+...|+...+..++++ +++.+..|.+|.+||++|....
T Consensus       666 ~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~-~a~~~a~~~~~~~~l~~a~~~~  733 (785)
T KOG0521|consen  666 TGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKR-GADPNAFDPDGKLPLDIAMEAA  733 (785)
T ss_pred             cchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccc-cccccccCccCcchhhHHhhhc
Confidence            999999999999999 999999999999999999999999888886 9999999999999999997763

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.88  E-value=2.2e-05  Score=64.84  Aligned_cols=69  Identities=20%  Similarity=0.190  Sum_probs=62.8

Q ss_pred             hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc
Q 037666           47 TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK  115 (375)
Q Consensus        47 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~  115 (375)
                      +.++|.+|..|+||++.|+..|+-+.+.+|++++.-.+...|..|.+.+.+|-+.|..++++.|.+...
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~   70 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDR   70 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence            457899999999999999999999999999999944358999999999999999999999999988754

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.72  E-value=6.8e-05  Score=68.30  Aligned_cols=58  Identities=19%  Similarity=0.162  Sum_probs=54.1

Q ss_pred             ChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhccC
Q 037666           58 CTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKG  116 (375)
Q Consensus        58 ~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~  116 (375)
                      .--|..||+.|.++.|+.|++.|.++ +.+|+-..+||.+|+..||.+++++|+++|++
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnV-N~vD~fD~spL~lAsLcGHe~vvklLLenGAi   94 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNV-NAVDRFDSSPLYLASLCGHEDVVKLLLENGAI   94 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCc-chhhcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence            34578999999999999999999997 89999999999999999999999999999993

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.71  E-value=3.9e-05  Score=78.36  Aligned_cols=118  Identities=11%  Similarity=-0.063  Sum_probs=92.4

Q ss_pred             HhchhcCCChHHHHHHHcCcHHHHHHHHcc-CCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc--CCcccchhhHH
Q 037666           50 LAKKNKIGCTAFFYAAGSGMVEIVEEAMKG-NKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK--GSLTDDECIEL  126 (375)
Q Consensus        50 ~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~--~~~~d~~g~t~  126 (375)
                      .......|++-+|+++..++.-.++.+++. +.. ...-|.+|...+|+ |..++.+..-+++....  ++++|.+|+||
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~-~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tp  644 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSG-DLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTP  644 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccC-chhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcc
Confidence            344556799999999999999999999996 433 46778899999999 44555666666655444  88899999999


Q ss_pred             HHHHHhcCcHHHHHHHHhcCCc------ccccccCCCCcHHHHHHHhcCC
Q 037666          127 LVKLIETDLYAVALRLLKDRPQ------LATKRDRNEETALHVLARKNLT  170 (375)
Q Consensus       127 Lh~A~~~~~~~~v~~LL~~~~~------~~~~~d~~G~T~Lh~A~~~~~~  170 (375)
                      ||+|...|+..++..|... +.      +....+-.|.|+-.+|..+|+.
T Consensus       645 L~wAa~~G~e~l~a~l~~l-ga~~~~~tdps~~~p~g~ta~~la~s~g~~  693 (975)
T KOG0520|consen  645 LHWAAFRGREKLVASLIEL-GADPGAVTDPSPETPGGKTAADLARANGHK  693 (975)
T ss_pred             cchHhhcCHHHHHHHHHHh-ccccccccCCCCCCCCCCchhhhhhccccc
Confidence            9999999999999998855 22      2233455699999999988766

>smart00248 ANK ankyrin repeats

Probab=96.62  E-value=0.0031  Score=34.78  Aligned_cols=25  Identities=28%  Similarity=0.397  Sum_probs=13.3

Q ss_pred             CChHHHHHHHcCcHHHHHHHHccCC
Q 037666           57 GCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus        57 g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      |.||+|+|+..|+.++++.|++.+.
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~   26 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGA   26 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            4455555555555555555555444

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>smart00248 ANK ankyrin repeats

Probab=96.53  E-value=0.0029  Score=34.91  Aligned_cols=24  Identities=42%  Similarity=0.540  Sum_probs=22.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHc
Q 037666           21 LGNTALHVAAQANCIDFVKELLKM   44 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~Ll~~   44 (375)
                      +|.||+|+|+..|+.++++.|++.
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~   24 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDK   24 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHc
Confidence            478999999999999999999988

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=96.42  E-value=0.0043  Score=58.87  Aligned_cols=62  Identities=21%  Similarity=0.201  Sum_probs=48.9

Q ss_pred             HHHHHHHHHcCChhhHh------chhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHH
Q 037666           35 IDFVKELLKMMSTEDLA------KKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAA   99 (375)
Q Consensus        35 ~~~v~~Ll~~~~~~~~~------~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa   99 (375)
                      .+.+++|.++  ..+.|      ..+.--.|+||+|+..|.-++|.+||+.++|. ..+|..|+||..++.
T Consensus       404 p~~ie~lken--~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp-~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKEN--LLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDP-STKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhc--CCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCc-hhcccCCCCcccccc
Confidence            5677777777  33332      23444679999999999999999999999884 889999999999887

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.83  E-value=0.0092  Score=56.68  Aligned_cols=61  Identities=16%  Similarity=-0.024  Sum_probs=44.7

Q ss_pred             HHHHHHHccCCCC-----ccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHH
Q 037666           71 EIVEEAMKGNKDI-----AMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLI  131 (375)
Q Consensus        71 ~iv~~Ll~~~~~~-----~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~  131 (375)
                      ..+++|.+.+.+.     +...+.--.|+||+|+..|..++|.++|+.+. +..+|..|+||..++.
T Consensus       405 ~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  405 DSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            4456666655433     12233345689999999999999999999887 7778889999988877

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=92.16  E-value=0.79  Score=39.62  Aligned_cols=43  Identities=9%  Similarity=-0.025  Sum_probs=23.4

Q ss_pred             cHHHHHHHHHhcc--CCc---ccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666          103 QRQTVVLLYEKTK--GSL---TDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus       103 ~~~iv~~Ll~~~~--~~~---~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      +..++++.+++|-  ++.   +-..|.|-|.-|++.++.+++..||+.
T Consensus       229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~  276 (284)
T PF06128_consen  229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKY  276 (284)
T ss_pred             cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHc
Confidence            3455555555554  221   334556666666666666666655555

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=88.70  E-value=0.91  Score=32.36  Aligned_cols=46  Identities=22%  Similarity=0.210  Sum_probs=21.8

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHcc
Q 037666           25 ALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG   79 (375)
Q Consensus        25 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~   79 (375)
                      -+..|+.+|+.|+++.+++.  +    ..+   ...+..|+...+-++++.|++.
T Consensus         9 tl~~Ai~GGN~eII~~c~~~--~----~~~---~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    9 TLEYAIIGGNFEIINICLKK--N----KPD---NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHhCCCHHHHHHHHHH--h----ccH---HHHHHHHHHHhhHHHHHHHHHh
Confidence            34555555555555555543  1    011   2345555555555555555543

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=88.07  E-value=3  Score=36.17  Aligned_cols=94  Identities=13%  Similarity=0.099  Sum_probs=65.0

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCC--hhhHhchhcCCChHHHHHHH--cCcHHHHHHHHccCC---CCccccCCCCCh
Q 037666           21 LGNTALHVAAQANCIDFVKELLKMMS--TEDLAKKNKIGCTAFFYAAG--SGMVEIVEEAMKGNK---DIAMVPGGDGTL   93 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~--~~~~~~~d~~g~tpLh~Aa~--~g~~~iv~~Ll~~~~---~~~~~~d~~g~t   93 (375)
                      +-.+++-+|..++..+++.+|+.+..  ..++-.. ..+.--+-|+.+  +.+..++++++++|-   +-.-.+-+.|.|
T Consensus       178 dA~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~-~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdt  256 (284)
T PF06128_consen  178 DAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASM-EKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDT  256 (284)
T ss_pred             HHHHHHHHHhcccHHHHHHHHHhhcceecchhhhc-CcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcch
Confidence            34678888888888889999987741  1111111 123345556554  456788888888873   222345677999


Q ss_pred             HHHHHHHcCcHHHHHHHHHhcc
Q 037666           94 PIVRAAALGQRQTVVLLYEKTK  115 (375)
Q Consensus        94 pLh~Aa~~g~~~iv~~Ll~~~~  115 (375)
                      -|.-|..+++.+++..|++.|+
T Consensus       257 MLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  257 MLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             HHHhHHhcCcHHHHHHHHHcCc
Confidence            9999999999999999999887

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=85.44  E-value=2.4  Score=30.10  Aligned_cols=47  Identities=21%  Similarity=0.152  Sum_probs=27.9

Q ss_pred             hHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHh
Q 037666           59 TAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK  113 (375)
Q Consensus        59 tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~  113 (375)
                      .-+..|+.+|+.|+++.+++.+ ..    +   ...+..|+..-+-+++++|++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~-~~----~---~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN-KP----D---NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh-cc----H---HHHHHHHHHHhhHHHHHHHHHh
Confidence            3456666666666666666543 21    1   3456666666666666666665

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=84.36  E-value=17  Score=30.67  Aligned_cols=130  Identities=16%  Similarity=0.039  Sum_probs=84.9

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcC
Q 037666           23 NTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALG  102 (375)
Q Consensus        23 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g  102 (375)
                      +..|..|++.+-.++.++.=+.     +...-..+++-.-.||+..+.|+|+.+-+.   + .  -.+-.+-.-.|..++
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~-----L~~~~~~~q~LFElAC~~qkydiV~WI~qn---L-~--i~~~~~iFdIA~~~k  115 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKED-----LENERYLNQELFELACEEQKYDIVKWIGQN---L-H--IYNPEDIFDIAFAKK  115 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHH-----hhcchhHHHHHHHHHHHHccccHHHHHhhc---c-C--CCCchhhhhhhhhcc
Confidence            3456778888888877666554     221123567788899999999999998432   2 1  123356677888888


Q ss_pred             cHHHHH----HHHHhccCC-ccc--chhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCC
Q 037666          103 QRQTVV----LLYEKTKGS-LTD--DECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLT  170 (375)
Q Consensus       103 ~~~iv~----~Ll~~~~~~-~~d--~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~  170 (375)
                      +.++..    +++++.... -.|  .--..-|..|+.+|....+...|++ |.+++      +++|-.|+..+++
T Consensus       116 DlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlky-gg~~~------~~vls~Av~ynhR  183 (192)
T PF03158_consen  116 DLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKY-GGNVD------IIVLSQAVKYNHR  183 (192)
T ss_pred             chhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHc-CCccc------HHHHHHHHHhhHH
Confidence            877532    233332211 111  1123467889999999999999988 55443      2899999998766

These proteins may be involved in promoting survival of infected macrophages [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=80.21  E-value=9.3  Score=32.15  Aligned_cols=125  Identities=15%  Similarity=0.084  Sum_probs=74.1

Q ss_pred             HHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHH----HHHccCC
Q 037666            6 IYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE----EAMKGNK   81 (375)
Q Consensus         6 lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~----~Ll~~~~   81 (375)
                      +|......+... -...++..-.||+..+.|+|+++-+..     ...  +-.+-+-.|....+.+...    .+.++..
T Consensus        61 ILqkyke~L~~~-~~~~q~LFElAC~~qkydiV~WI~qnL-----~i~--~~~~iFdIA~~~kDlsLyslGY~l~~~~~~  132 (192)
T PF03158_consen   61 ILQKYKEDLENE-RYLNQELFELACEEQKYDIVKWIGQNL-----HIY--NPEDIFDIAFAKKDLSLYSLGYKLLFNRMM  132 (192)
T ss_pred             HHHHHHHHhhcc-hhHHHHHHHHHHHHccccHHHHHhhcc-----CCC--CchhhhhhhhhccchhHHHHHHHHHHhhcc
Confidence            344444433321 235677888999999999999996652     111  1234455677777665421    2222211


Q ss_pred             CCccccCCC--CChHHHHHHHcCcHHHHHHHHHhccCCcccchhhHHHHHHHhcCcHHHHHHHHh
Q 037666           82 DIAMVPGGD--GTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLK  144 (375)
Q Consensus        82 ~~~~~~d~~--g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~  144 (375)
                      +. ...|..  -.--|..|+..|-.+.+...++.|.     .-..++|-.|+..++.+++.+++.
T Consensus       133 ~~-~~~d~~~ll~~hl~~a~~kgll~F~letlkygg-----~~~~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  133 SE-HNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGG-----NVDIIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             cc-cccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCC-----cccHHHHHHHHHhhHHHHHHHhhc
Confidence            10 001100  0123567888898888888888775     122378889999888888877654

These proteins may be involved in promoting survival of infected macrophages [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	375
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	6e-11
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	5e-10
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	6e-04
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-10
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	7e-07
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-06
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	7e-06
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-04
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	9e-10
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-07
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-07
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-07
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-06
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-09
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-07
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	7e-07
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	9e-09
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-08
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-07
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-06
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-08
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-08
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-06
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-05
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-08
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	7e-07
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-06
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-05
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	6e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-07
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-04
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-08
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-08
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	8e-07
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-06
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-08
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-08
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	5e-06
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-08
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	6e-06
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-08
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-07
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-05
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-04
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	5e-08
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	7e-04
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-08
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-07
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-07
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	8e-07
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	5e-05
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	6e-08
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-06
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-05
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	7e-08
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-07
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	9e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-04
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-08
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-07
3hra_A	201	Ankyrin repeat family protein; structural protein;	8e-08
3hra_A	201	Ankyrin repeat family protein; structural protein;	7e-06
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-05
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	8e-08
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-07
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	7e-07
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	9e-08
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	7e-07
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	9e-08
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-07
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-06
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-06
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-05
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-04
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-04
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-07
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-07
3v30_A	172	DNA-binding protein rfxank; structural genomics co	8e-07
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-07
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-07
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-06
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-06
2rfa_A	232	Transient receptor potential cation channel subfa	1e-07
2rfa_A	232	Transient receptor potential cation channel subfa	3e-07
2rfa_A	232	Transient receptor potential cation channel subfa	6e-07
2rfa_A	232	Transient receptor potential cation channel subfa	1e-06
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-07
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-07
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-07
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-06
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-07
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-07
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-06
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-06
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-07
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-07
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-07
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-06
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-07
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-07
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-06
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-06
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-06
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-06
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-07
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-06
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-05
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	8e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-07
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-07
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-07
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-07
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-06
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-06
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-06
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-06
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-07
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-07
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-07
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	9e-07
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-06
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-06
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-07
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-07
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	5e-07
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-07
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-06
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-06
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-07
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-07
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	8e-07
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-07
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	6e-07
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-07
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-07
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-06
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-05
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-07
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-06
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-06
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-06
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-04
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-07
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-06
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-05
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-05
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-04
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-04
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-07
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-06
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-05
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-05
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-05
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	6e-05
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-04
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	9e-07
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-05
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	7e-04
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-06
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-06
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-05
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-06
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-04
3jxi_A	260	Vanilloid receptor-related osmotically activated p	5e-04
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-06
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-04
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-06
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-05
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	9e-06
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-05
2pnn_A	273	Transient receptor potential cation channel subfa	2e-05
2pnn_A	273	Transient receptor potential cation channel subfa	3e-05
2etb_A	256	Transient receptor potential cation channel subfam	4e-05
2etb_A	256	Transient receptor potential cation channel subfam	5e-04
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	8e-05
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	8e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-05
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-04

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 61.0 bits (148), Expect = 6e-11
 Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 3/152 (1%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
                  TALH A  A   + V+ LL++     +  K+  G +    AA +G  EIV+  
Sbjct: 35  RTDQDSRTALHWACSAGHTEIVEFLLQLGV--PVNDKDDAGWSPLHIAASAGXDEIVKAL 92

Query: 77  MKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLY 136
           +     +      +G  P+  AA+  + +  V+L E        D      +        
Sbjct: 93  LVKGAHVN-AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGN 151

Query: 137 AVALRLLKDRPQLATKRDRNEETALHVLARKN 168
              + +L         +D    T LH+   + 
Sbjct: 152 LKMVHILLFYKASTNIQDTEGNTPLHLACDEE 183

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 59.6 bits (144), Expect = 5e-10
 Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 2/105 (1%)

Query: 11  EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMV 70
            DEI + I      A  +AA+   +  +  L ++  TE +A        AF  AA +G +
Sbjct: 117 SDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHL 176

Query: 71  EIVEE--AMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
            ++     +   +  AM+   +       A   G    +  L + 
Sbjct: 177 HVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC 221

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 40.7 bits (95), Expect = 6e-04
 Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 5/61 (8%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG 79
              N  L +A +         LL + S   L K N      ++     G +++   A++ 
Sbjct: 317 GDANELLRLALRLGNQGACALLLSIPSVLALTKAN-----NYYINETGGRLDLRAVALEH 371

Query: 80  N 80
           +
Sbjct: 372 H 372

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 58.7 bits (143), Expect = 5e-10
 Identities = 34/175 (19%), Positives = 49/175 (28%), Gaps = 32/175 (18%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKM-MSTEDLAKKNKIGCTAFFYAAGSGMVEIVEE 75
            +T  G+TALH+A       F+  LL      E L  +N +G TA   AA  G    VE+
Sbjct: 4   YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK 63

Query: 76  ----------------------AMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
                                         A V        +++      R        +
Sbjct: 64  LYAAGAGVLVAERGGHTALHLACRVRAHTCACV--------LLQPRPSHPRDASDTYLTQ 115

Query: 114 TKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKN 168
           ++    D       V            R    R QL    + +  T LHV     
Sbjct: 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL-EAENYDGHTPLHVAVIHK 169

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 49.1 bits (118), Expect = 7e-07
 Identities = 6/62 (9%), Positives = 12/62 (19%), Gaps = 8/62 (12%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTE---DLAKKNKIGCTAFFYAAGSGMVEIV 73
                G T L  A         + L             +      +    +      +  
Sbjct: 220 ARMYGGRTPLGSALLRPNPILARLLR-----AHGAPEPEDGGDKLSPCSSSGSDSDSDNR 274

Query: 74  EE 75
           +E
Sbjct: 275 DE 276

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 47.9 bits (115), Expect = 2e-06
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             G T LH+A +A     ++ LLK  +  D   +   G T    A       +  
Sbjct: 190 TCGRTPLHLAVEAQAASVLELLLK--AGADPTARMYGGRTPLGSALLRPNPILAR 242

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 46.0 bits (110), Expect = 7e-06
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDL-AKKNKIGCTAFFYAAGSGMVEIVE 74
                G+T LHVA      + V+ L    +  DL   +   G T    A  +    ++E
Sbjct: 153 AENYDGHTPLHVAVIHKDAEMVRLLRDAGA--DLNKPEPTCGRTPLHLAVEAQAASVLE 209

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 40.6 bits (96), Expect = 5e-04
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 1/73 (1%)

Query: 2   VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAF 61
             +D  D Y  +      +  +    V +Q N  +  +   +      L  +N  G T  
Sbjct: 104 HPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRL-QLEAENYDGHTPL 162

Query: 62  FYAAGSGMVEIVE 74
             A      E+V 
Sbjct: 163 HVAVIHKDAEMVR 175

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 57.3 bits (139), Expect = 9e-10
 Identities = 22/166 (13%), Positives = 41/166 (24%), Gaps = 45/166 (27%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81
           G   +  A          EL       D+     +  T ++     G   ++       +
Sbjct: 12  GQVKVFRALYTFEPRTPDELYI--EEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQ 69

Query: 82  DIAMVPGGDGTLPIVRAAALGQRQTVVLL------------YEKT-------KGSLTDDE 122
                       P+  AA  G    +                  T        G     +
Sbjct: 70  AE------SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHK---D 120

Query: 123 CIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKN 168
            +E+L      +L                ++++  +TALH  A K 
Sbjct: 121 IVEMLFTQPNIEL---------------NQQNKLGDTALHAAAWKG 151

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            LG+TALH AA     D V+ LL   +      +N     AF  A  +    +++
Sbjct: 138 KLGDTALHAAAWKGYADIVQLLLAKGA--RTDLRNIEKKLAFDMATNAACASLLK 190

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 12/102 (11%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE-- 74
            +   G+TAL+ A      D V+ L    +  +L ++NK+G TA   AA  G  +IV+  
Sbjct: 101 GLDKAGSTALYWACHGGHKDIVEMLFTQPNI-ELNQQNKLGDTALHAAAWKGYADIVQLL 159

Query: 75  ---EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
               A    ++I      +  L    A        +      
Sbjct: 160 LAKGARTDLRNI------EKKLAFDMATNAACASLLKKKQGT 195

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 16  QEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            E     +  LH AA+   + +++E L       +   +K G TA ++A   G  +IVE
Sbjct: 67  AEQAESIDNPLHEAAKRGNLSWLRECLDNRV--GVNGLDKAGSTALYWACHGGHKDIVE 123

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 7/58 (12%), Positives = 17/58 (29%), Gaps = 7/58 (12%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           IT++ +T             +           +A++ +        AA  G +  + 
Sbjct: 40 YITDMSDTNWWKGTSKGRTGLIPSN-------YVAEQAESIDNPLHEAAKRGNLSWLR 90

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 56.7 bits (138), Expect = 1e-09
 Identities = 33/180 (18%), Positives = 51/180 (28%), Gaps = 49/180 (27%)

Query: 14  IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIV 73
           +     + G T  H+A     ++ VK L       DL K    G T    A G    E+ 
Sbjct: 64  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 123

Query: 74  EE-----AMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLL-------------YEKT- 114
           +      A    KD          +P+ RAA++G  + + LL                T 
Sbjct: 124 QFLIENGASVRIKDK------FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTP 177

Query: 115 ------KGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKN 168
                 +G     +   LLV+    +                   D     A  V   + 
Sbjct: 178 LFHALAEGHG---DAAVLLVEKYGAEYDL---------------VDNKGAKAEDVALNEQ 219

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 3/98 (3%)

Query: 21  LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEE--AMK 78
           + N  LH A   N    V+ELL       L +K++ G     ++      EI     +  
Sbjct: 1   MSNYPLHQACMENEFFKVQELL-HSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 59

Query: 79  GNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKG 116
            N ++   P   G  P   A ++G  + V  LY++   
Sbjct: 60  ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLK 97

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 48.6 bits (117), Expect = 7e-07
 Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLKMMS-TEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          +    G   LH +      +    LL  M         +  G T F  A   G +E+V+
Sbjct: 31 QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVK 89

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 54.4 bits (132), Expect = 9e-09
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKM--MSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            +   G TA H+A +      ++ LL      T DL  +N  G TA   A  +   E V+
Sbjct: 74  ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQ 133

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 53.6 bits (130), Expect = 2e-08
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLKMMSTE--DLAKKNKIGCTAFFYAAGSGMVEIVE 74
               G+T LH+A     +  V  L+ +      +L   N +  T    A  + +  +V 
Sbjct: 4  RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVR 63

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 49.4 bits (119), Expect = 5e-07
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G++ALH A+    +  V+ L++  S  D + KN    T    A    +++I+ 
Sbjct: 178 AQMYSGSSALHSASGRGLLPLVRTLVR--SGADSSLKNCHNDTPLMVARSRRVIDILR 233

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 47.4 bits (114), Expect = 2e-06
 Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 2/58 (3%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             NL  T LH+A        V+ L+   +       ++ G TA   A        + 
Sbjct: 41 IYNNLRQTPLHLAVITTLPSVVRLLVTAGA--SPMALDRHGQTAAHLACEHRSPTCLR 96

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 44.4 bits (106), Expect = 2e-05
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G TALHVA    C + V+ LL+  +  D A   K G +   +A  +  + +V+
Sbjct: 111 ARNYDGLTALHVAVNTECQETVQLLLERGADID-AVDIKSGRSPLIHAVENNSLSMVQ 167

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 54.4 bits (132), Expect = 1e-08
 Identities = 33/150 (22%), Positives = 56/150 (37%), Gaps = 9/150 (6%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMK 78
              G TALH A   + +D VK L++  +  ++ + +  G      AA  G ++I E  + 
Sbjct: 70  NVDGLTALHQACIDDNVDMVKFLVENGA--NINQPDNEGWIPLHAAASCGYLDIAEYLIS 127

Query: 79  GNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAV 138
               +  V   +G  P+  A      + +     +          IE   K  E  +   
Sbjct: 128 QGAHVGAV-NSEGDTPLDIAEEEAMEELLQNEVNR------QGVDIEAARKEEERIMLRD 180

Query: 139 ALRLLKDRPQLATKRDRNEETALHVLARKN 168
           A + L        +  ++  TALHV A K 
Sbjct: 181 ARQWLNSGHINDVRHAKSGGTALHVAAAKG 210

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 53.3 bits (129), Expect = 4e-08
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
           +  N G   LH AA    +D  + L+   +   +   N  G T    A    M E+++  
Sbjct: 101 QPDNEGWIPLHAAASCGYLDIAEYLISQGA--HVGAVNSEGDTPLDIAEEEAMEELLQNE 158

Query: 77  M-KGNKDI 83
           + +   DI
Sbjct: 159 VNRQGVDI 166

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 46.7 bits (112), Expect = 5e-06
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMK 78
              G T LH AA     +  + L++ +   D+   NK+G TAF  A    +  + E   K
Sbjct: 229 DYDGWTPLHAAAHWGKEEACRILVENLC--DMEAVNKVGQTAFDVADEDILGYLEELQKK 286

Query: 79  GNKDIA 84
            N   +
Sbjct: 287 QNLLHS 292

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G TALHVAA     + +K L++     D+  K+  G T    AA  G  E   
Sbjct: 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARY--DVNIKDYDGWTPLHAAAHWGKEEACR 249

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 25/83 (30%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELL---------------KMMSTE----------DLA 51
            + + G+T L +A +    + ++  +               ++M  +          +  
Sbjct: 134 AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV 193

Query: 52  KKNKIGCTAFFYAAGSGMVEIVE 74
           +  K G TA   AA  G  E+++
Sbjct: 194 RHAKSGGTALHVAAAKGYTEVLK 216

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 52.4 bits (127), Expect = 2e-08
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 15 GQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          G    +  +  L  AA+A  ++ VK+L   + + +         T   +AAG   V +VE
Sbjct: 1  GAMGNSEADRQLLEAAKAGDVETVKKLCT-VQSVNCRDIEGRQSTPLHFAAGYNRVSVVE 59

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 47.8 bits (115), Expect = 7e-07
 Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G   LH A      +  + L+K  +   +   +    T    AA  G  EI +
Sbjct: 70  AKDKGGLVPLHNACSYGHYEVAELLVKHGA--VVNVADLWKFTPLHEAAAKGKYEICK 125

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 46.6 bits (112), Expect = 2e-06
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          +I    +T LH AA  N +  V+ LL+  +  D+  K+K G      A   G  E+ E
Sbjct: 37 DIEGRQSTPLHFAAGYNRVSVVEYLLQHGA--DVHAKDKGGLVPLHNACSYGHYEVAE 92

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 43.1 bits (103), Expect = 2e-05
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 3/58 (5%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                  T LH AA     +  K LL+  +  D  KKN+ G T        G  +I +
Sbjct: 103 VADLWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVK-DGDTDIQD 157

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 19/151 (12%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMK 78
            +     +HVAA+    D V+ L++         +N+ GCTA   A   G V+  +    
Sbjct: 17  DDENMEKIHVAARKGQTDEVRRLIETGV--SPTIQNRFGCTALHLACKFGCVDTAKYLAS 74

Query: 79  GNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAV 138
             +  ++     G  PI  A    +   VV L             +E   +  +     +
Sbjct: 75  VGEVHSLW---HGQKPIHLAVMANKTDLVVAL-------------VEGAKERGQMPESLL 118

Query: 139 ALRLLKDRPQL-ATKRDRNEETALHVLARKN 168
                ++  ++ +  +    +TALH      
Sbjct: 119 NECDEREVNEIGSHVKHCKGQTALHWCVGLG 149

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 54.1 bits (131), Expect = 3e-08
 Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE-- 74
                GN+ LH A   N  D     ++M    D+  ++       + +  + MV + +  
Sbjct: 206 YANKQGNSHLHWAILINWEDVAMRFVEMGI--DVNMEDNEHTVPLYLSVRAAMVLLTKEL 263

Query: 75  ----------EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
                          N    +         +  AA   +++ + LL EK
Sbjct: 264 LQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEK 312

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 52.9 bits (128), Expect = 6e-08
 Identities = 8/59 (13%), Positives = 20/59 (33%), Gaps = 3/59 (5%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTE---DLAKKNKIGCTAFFYAAGSGMVEIVE 74
                T L  A +    + +  ++  + ++    L   NK G +   +A      ++  
Sbjct: 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAM 228

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 49.5 bits (119), Expect = 7e-07
 Identities = 24/150 (16%), Positives = 37/150 (24%), Gaps = 52/150 (34%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81
           G   +H+A  AN  D V  L++           + G             E+  E     K
Sbjct: 84  GQKPIHLAVMANKTDLVVALVE--------GAKERGQMPESLLNECDEREVN-EIGSHVK 134

Query: 82  DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKL---IETDLYAV 138
                    G   +     LG                   E I++LV+L           
Sbjct: 135 HC------KGQTALHWCVGLGPEYL---------------EMIKILVQLGASPT------ 167

Query: 139 ALRLLKDRPQLATKRDRNEETALHVLARKN 168
                         +D+ +ET L       
Sbjct: 168 -------------AKDKADETPLMRAMEFR 184

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 4/58 (6%), Positives = 16/58 (27%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
               +    +  AA  +  + ++ L + +   ++ +    G              +  
Sbjct: 285 PDRVVWLDFVPAAADPSKQEVLQLLQEKLD--EVVRSLNTGAGGAVKRKKKAAPAVKR 340

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 4/58 (6%)

Query: 19  TNLGNTALHVAAQA--NCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              G TALH         ++ +K L+++ +      K+K   T    A      E ++
Sbjct: 135 HCKGQTALHWCVGLGPEYLEMIKILVQLGA--SPTAKDKADETPLMRAMEFRNREALD 190

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 52.4 bits (127), Expect = 2e-08
 Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            +   GN  LH A         ++L+   +   ++  NK G      A       + E
Sbjct: 100 AVNEHGNVPLHYACFWGQDQVAEDLVA--NGALVSICNKYGEMPVDKAKAPLRELLRE 155

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 51.7 bits (125), Expect = 4e-08
 Identities = 9/56 (16%), Positives = 19/56 (33%), Gaps = 1/56 (1%)

Query: 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          +      +    +      V+  L   +  DL + +  G +   +A   G   +VE
Sbjct: 2  SPEFMDDIFTQCREGNAVAVRLWLD-NTENDLNQGDDHGFSPLHWACREGRSAVVE 56

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 47.8 bits (115), Expect = 8e-07
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
               +T LH+AA     D V++LL+  +  D+   N+ G     YA   G  ++ E
Sbjct: 69  NRGDDTPLHLAASHGHRDIVQKLLQYKA--DINAVNEHGNVPLHYACFWGQDQVAE 122

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 46.7 bits (112), Expect = 2e-06
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          +  + G + LH A +      V+ L+   +   +   N+   T    AA  G  +IV+
Sbjct: 34 QGDDHGFSPLHWACREGRSAVVEMLIMRGA--RINVMNRGDDTPLHLAASHGHRDIVQ 89

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 50.7 bits (122), Expect = 3e-08
 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 3/98 (3%)

Query: 13  EIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEI 72
             G  + +     L  AA+A   D V+ L+   +  D+A K+K G T    AA +G +E+
Sbjct: 15  PRGSHMGSDLGKKLLEAARAGQDDEVRILMA--NGADVAAKDKNGSTPLHLAARNGHLEV 72

Query: 73  VEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLL 110
           V+  ++   D+       G      +   G      +L
Sbjct: 73  VKLLLEAGADV-XAQDKFGKTAFDISIDNGNEDLAEIL 109

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 31/179 (17%), Positives = 51/179 (28%), Gaps = 27/179 (15%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
           +    G TALH A        V  L+   +  ++   +  G T    AA      I    
Sbjct: 49  QPNEEGITALHNAICGANYSIVDFLITAGA--NVNSPDSHGWTPLHCAASCNDTVICMAL 106

Query: 77  MKGNKDIAMVPGGDGTLPIVRAAAL--GQRQTVVLLYEKTKGSLTDDECIELLVKLIETD 134
           ++    I      DG     +      G       L +        ++ + L+       
Sbjct: 107 VQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV-------EQSMGLMNSGAVYA 159

Query: 135 LYAVA------LRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKL 187
           L+  +      L   +       +RD  EET     A  +         G E  VP+  
Sbjct: 160 LWDYSAEFGDELSFREGESVTVLRRDGPEETDWW-WAALH---------GQEGYVPRNY 208

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              L  AA    ++ V++ +K M+  D ++ N+ G TA   A       IV+
Sbjct: 21 PLVLLLDAALTGELEVVQQAVKEMN--DPSQPNEEGITALHNAICGANYSIVD 71

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 20/132 (15%), Positives = 31/132 (23%), Gaps = 37/132 (28%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEE- 75
           +   L    L  ++     D V+ ++  +   D +  N  G TA   A  +G  EIV+  
Sbjct: 32  KFNPLPLALLLDSSLEGEFDLVQRIIYEVD--DPSLPNDEGITALHNAVCAGHTEIVKFL 89

Query: 76  ---------------------AMKGNKDIAMV-------------PGGDGTLPIVRAAAL 101
                                A   N  +                               
Sbjct: 90  VQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEE 149

Query: 102 GQRQTVVLLYEK 113
           G  Q    LY  
Sbjct: 150 GYTQCSQFLYGV 161

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 8/53 (15%), Positives = 18/53 (33%), Gaps = 3/53 (5%)

Query: 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          G  +L    + N      E +   +     K N +       ++  G  ++V+
Sbjct: 5  GQVSLPPGKRTNLRKTGSERI---AHGMRVKFNPLPLALLLDSSLEGEFDLVQ 54

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 51.2 bits (124), Expect = 4e-08
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              N GN  LH+AA+   +  V+ L+K  +  ++  +N  G TA   A   G  E+V 
Sbjct: 98  IEDNEGNLPLHLAAKEGHLRVVEFLVKHTA-SNVGHRNHKGDTACDLARLYGRNEVVS 154

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 47.4 bits (114), Expect = 9e-07
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G   +H AA+A  +D ++ LL+  +  D+  ++  G      AA  G + +VE
Sbjct: 65  LKDRTGFAVIHDAARAGFLDTLQTLLEFQA--DVNIEDNEGNLPLHLAAKEGHLRVVE 120

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 44.3 bits (106), Expect = 1e-05
 Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 3/57 (5%)

Query: 18 ITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          +       L  AA    ++ +  LL+  +  ++  +N  G TA       G  EI  
Sbjct: 1  MAEPWGNELASAAARGDLEQLTSLLQ--NNVNVNAQNGFGRTALQVMK-LGNPEIAR 54

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 40.8 bits (97), Expect = 1e-04
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 3/58 (5%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
               G TAL V       +  + LL   +  +   K++ G      AA +G ++ ++
Sbjct: 33 AQNGFGRTALQVMKL-GNPEIARRLLLRGA--NPDLKDRTGFAVIHDAARAGFLDTLQ 87

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 52.2 bits (126), Expect = 5e-08
 Identities = 24/178 (13%), Positives = 58/178 (32%), Gaps = 25/178 (14%)

Query: 13  EIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEI 72
            I  ++ +   T    AA+      + +LL+     D+   ++ G TA  + AG G  + 
Sbjct: 36  YIAADVVSEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKC 92

Query: 73  VEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLL-------YEKTKGSLT------ 119
           V    +   D+       G   +  AA   + + V  L         + +  LT      
Sbjct: 93  VRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 152

Query: 120 ---DDECIELLVK----LIETDLYAVALRLLKDRPQLA--TKRDRNEETALHVLARKN 168
                      ++    +    +  V    + +  ++    ++    +   +++  K+
Sbjct: 153 EILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKD 210

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 28/170 (16%), Positives = 46/170 (27%), Gaps = 48/170 (28%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG 79
             G     +  +                   A       T ++ AA     + + + ++ 
Sbjct: 13  GEGAMEYLIEWKDGHSPSWVPSS-----YIAADVVSEYETPWWTAARKADEQALSQLLED 67

Query: 80  -NKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK--------TKGSLT---------DD 121
            + D       +G   ++  A LG  + V LL E          +G LT           
Sbjct: 68  RDVDAV---DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRP 124

Query: 122 ECIELLVKL---IETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKN 168
           E +E LV+L   IE                     D    TAL +     
Sbjct: 125 EVVEALVELGADIE-------------------VEDERGLTALELAREIL 155

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 52.2 bits (126), Expect = 6e-08
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLK----MMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              GNT LH+A +  C+  V  L +          L   N  G T    A+  G + IVE
Sbjct: 75  DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVE 134

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 50.6 bits (122), Expect = 2e-07
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 16 QEITNLGNTALHVAAQANCIDFVKELLKMMSTE--DLAKKNKIGCTAFFYAAGSGMVEIV 73
          Q++T  G++ LH+A          E+++ +  +   L  +N +  T    A  +   EI 
Sbjct: 2  QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIA 61

Query: 74 E 74
          E
Sbjct: 62 E 62

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 48.7 bits (117), Expect = 7e-07
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          NL  T LH+A   N  +  + LL      D   ++  G T    A   G +  V 
Sbjct: 43 NLQQTPLHLAVITNQPEIAEALLGAGC--DPELRDFRGNTPLHLACEQGCLASVG 95

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 48.7 bits (117), Expect = 8e-07
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           G TALH+A      D V  LLK  +  D+ +    G + +    G     I +
Sbjct: 151 GRTALHLAVDLQNPDLVSLLLKCGA--DVNRVTYQGYSPYQLTWGRPSTRIQQ 201

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 42.9 bits (102), Expect = 5e-05
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G+T LH+A+    +  V+ L+ + +  + A++   G TA   A      ++V 
Sbjct: 112 ATNYNGHTCLHLASIHGYLGIVELLVSLGADVN-AQEPCNGRTALHLAVDLQNPDLVS 168

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 50.5 bits (122), Expect = 6e-08
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 3/58 (5%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G   +H+A Q      V  L    +  DL +++  G T    A   G  ++V+
Sbjct: 96  VPDGTGALPIHLAVQEGHTAVVSFLA---AESDLHRRDARGLTPLELALQRGAQDLVD 150

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 47.0 bits (113), Expect = 1e-06
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G + +H AA+   +D +K L++  +  D+   +  G      A   G   +V 
Sbjct: 63  VQDTSGTSPVHDAARTGFLDTLKVLVEHGA--DVNVPDGTGALPIHLAVQEGHTAVVS 118

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 42.0 bits (100), Expect = 5e-05
 Identities = 23/96 (23%), Positives = 32/96 (33%), Gaps = 14/96 (14%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE----- 74
             G TAL V           ELLK  +      ++  G +    AA +G ++ ++     
Sbjct: 34  RFGKTALQVMMF-GSTAIALELLKQGA--SPNVQDTSGTSPVHDAARTGFLDTLKVLVEH 90

Query: 75  EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLL 110
            A     D        G LPI  A   G    V  L
Sbjct: 91  GADVNVPDG------TGALPIHLAVQEGHTAVVSFL 120

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 52.1 bits (126), Expect = 7e-08
 Identities = 31/179 (17%), Positives = 54/179 (30%), Gaps = 56/179 (31%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEE- 75
              N+G T LH A  A+     + L++  +T DL  +   G T    AA   +  ++E+ 
Sbjct: 85  IQDNMGRTPLHAAVSADAQGVFQILIRNRAT-DLDARMHDGTTPLILAARLAVEGMLEDL 143

Query: 76  ----AMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLL------------YEKT----- 114
               A     D        G   +  AAA+      V+L             E+T     
Sbjct: 144 INSHADVNAVDD------LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLA 197

Query: 115 --KGSLTDDECIELLVKL---IETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKN 168
             +GS    E  ++L+      +                     D  +     +   + 
Sbjct: 198 AREGSY---ETAKVLLDHFANRD-------------------ITDHMDRLPRDIAQERM 234

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 50.2 bits (121), Expect = 3e-07
 Identities = 34/181 (18%), Positives = 62/181 (34%), Gaps = 52/181 (28%)

Query: 13  EIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEI 72
            +  +    G TALH+AA+ +  D  K LL+  +  D   ++ +G T    A  +    +
Sbjct: 48  SLHNQTDRTGETALHLAARYSRSDAAKRLLEASA--DANIQDNMGRTPLHAAVSADAQGV 105

Query: 73  VE---EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLL------------YEKT--- 114
            +        + D  M    DGT P++ AA L     +  L              K+   
Sbjct: 106 FQILIRNRATDLDARMH---DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH 162

Query: 115 ----KGSLTDDECIELLVKL---IETDLYAVALRLLKDRPQLATKRDRNEETALHVLARK 167
                 ++   +   +L+K     +                    ++  EET L + AR+
Sbjct: 163 WAAAVNNV---DAAVVLLKNGANKD-------------------MQNNREETPLFLAARE 200

Query: 168 N 168
            
Sbjct: 201 G 201

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 45.5 bits (109), Expect = 9e-06
 Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              N   T L +AA+    +  K LL   +  +    + +       A      +IV 
Sbjct: 185 MQNNREETPLFLAAREGSYETAKVLLDHFA--NRDITDHMDRLPRDIAQERMHHDIVR 240

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 40.5 bits (96), Expect = 4e-04
 Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 14/69 (20%)

Query: 19 TNLGNTALHVAA-------------QANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAA 65
             G T L +A+             + +    + + +         + ++ G TA   AA
Sbjct: 7  GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIY-QGASLHNQTDRTGETALHLAA 65

Query: 66 GSGMVEIVE 74
               +  +
Sbjct: 66 RYSRSDAAK 74

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 48.9 bits (118), Expect = 7e-08
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             G T LH+AA+   ++ VK LL+  +  D+  K+K G T    AA +G +E+V+
Sbjct: 32 DKNGRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTPLHLAARNGHLEVVK 85

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 47.3 bits (114), Expect = 2e-07
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          G T LH+AA+   ++ VK LL+  +  D+  K+K G T    AA +G +E+V+
Sbjct: 2  GRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTPLHLAARNGHLEVVK 52

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 51.3 bits (124), Expect = 8e-08
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 4/95 (4%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
           E+   GNT L++A   N I+  K L+   +  D+  +N I  + + YA   G  EI+   
Sbjct: 34  EVDTEGNTPLNIAVHNNDIEIAKALIDRGA--DINLQNSISDSPYLYAGAQGRTEILAYM 91

Query: 77  M-KGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLL 110
           +     D+       G   ++ AA  G    V LL
Sbjct: 92  LKHATPDLN-KHNRYGGNALIPAAEKGHIDNVKLL 125

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 45.5 bits (109), Expect = 7e-06
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 6/63 (9%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAA-----GSGMVE 71
           +    G  AL  AA+   ID VK LL+    ED+  +N  G TA   A           +
Sbjct: 101 KHNRYGGNALIPAAEKGHIDNVKLLLE-DGREDIDFQNDFGYTALIEAVGLREGNQLYQD 159

Query: 72  IVE 74
           IV+
Sbjct: 160 IVK 162

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 43.6 bits (104), Expect = 2e-05
 Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          T      L  A Q +     + L    +T  + + +  G T    A  +  +EI +
Sbjct: 3  TYEVGALLEAANQRDTKKVKEILQD--TTYQVDEVDTEGNTPLNIAVHNNDIEIAK 56

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 49.3 bits (119), Expect = 8e-08
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          ++ +     A +   +D VK+ +     ED+ +  + G     YAA  G +EI+E
Sbjct: 5  SMCDKEFMWALKNGDLDEVKDYVA--KGEDVNRTLEGGRKPLHYAADCGQLEILE 57

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 47.4 bits (114), Expect = 5e-07
 Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 2/55 (3%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
               T L  A     +  VK LL   +  D   K   G TAF       +  +++
Sbjct: 71  KHHITPLLSAVYEGHVSCVKLLLSKGA--DKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 47.0 bits (113), Expect = 7e-07
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            G   LH AA    ++ ++ LL   +  D+   +K   T    A   G V  V+
Sbjct: 38 EGGRKPLHYAADCGQLEILEFLLLKGA--DINAPDKHHITPLLSAVYEGHVSCVK 90

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 49.3 bits (119), Expect = 9e-08
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            GNT LH+AA+    + VK LL   +  D+  ++K G T    A  +G  EIV+
Sbjct: 40 KDGNTPLHLAAKNGHAEIVKLLLAKGA--DVNARSKDGNTPEHLAKKNGHHEIVK 92

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 46.6 bits (112), Expect = 7e-07
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          +  GNT LH AA+    + VK+LL      D+  ++K G T    AA +G  EIV+
Sbjct: 6  SKDGNTPLHNAAKNGHAEEVKKLLS--KGADVNARSKDGNTPLHLAAKNGHAEIVK 59

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 52.3 bits (126), Expect = 9e-08
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G TALH AAQ + +  VK L+    + +  K+++ G T    AA  G +E+V 
Sbjct: 274 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGS-NKDKQDEDGKTPIMLAAQEGRIEVVM 330

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 38/160 (23%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE-- 74
            +    NT L +A  A     V  L+K  +  D    NK   +A   AA +    ++   
Sbjct: 161 AMDCDENTPLMLAVLARRRRLVAYLMKAGA--DPTIYNKSERSALHQAAANRDFGMMVYM 218

Query: 75  ---EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKL- 130
                +KG+ +       +G   ++  A    R  V                 +LLV+  
Sbjct: 219 LNSTKLKGDIEELDR---NGMTALMIVAHNEGRDQV--------------ASAKLLVEKG 261

Query: 131 --IETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKN 168
             ++ D  A                     TALH  A+ +
Sbjct: 262 AKVDYDGAAR-----------KDSEKYKGRTALHYAAQVS 290

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 6/59 (10%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAK------KNKIGCTAFFYAAGSGMVEIVE 74
             T LH  A  +  +  ++L+   + E +A        +    T    A  +    +V 
Sbjct: 125 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVA 183

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 9/67 (13%)

Query: 17  EITNLGNTALHVAAQANCIDFVK--ELL-------KMMSTEDLAKKNKIGCTAFFYAAGS 67
           E+   G TAL + A     D V   +LL                 +   G TA  YAA  
Sbjct: 230 ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQV 289

Query: 68  GMVEIVE 74
             + IV+
Sbjct: 290 SNMPIVK 296

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           +    G T + +AAQ   I+ V  L++  +   +   +    TA   A  +    IV+
Sbjct: 308 KQDEDGKTPIMLAAQEGRIEVVMYLIQQGA--SVEAVDATDHTARQLAQANNHHNIVD 363

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 12/153 (7%), Positives = 26/153 (16%), Gaps = 32/153 (20%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
           E+ +                           +   +            A +G   I E  
Sbjct: 56  ELQHYSLYPNPQGYGNGNDFLGDFNHTN--LQIPTEPEPESPIKLHTEA-AGSYAITEPI 112

Query: 77  MKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDEC-IELLVKLIETDL 135
            + + +I           +   A+    +    L              +           
Sbjct: 113 TRESVNIID--PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVN---------- 160

Query: 136 YAVALRLLKDRPQLATKRDRNEETALHVLARKN 168
                             D +E T L +     
Sbjct: 161 ----------------AMDCDENTPLMLAVLAR 177

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 24/180 (13%), Positives = 46/180 (25%), Gaps = 50/180 (27%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
           E        LH  A        + + +   + ++        T   + A +   E  E+ 
Sbjct: 89  EPEPESPIKLHTEAA-GSYAITEPITR--ESVNIIDPRH-NRTVLHWIASNSSAEKSEDL 144

Query: 77  MKGNKDIAMVPGGD-------GTLPIVRAAALGQRQTVVLL------------YEKT--- 114
           +       +  G D          P++ A    +R+ V  L             E++   
Sbjct: 145 IVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALH 204

Query: 115 ----KGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLA--TKRDRNEETALHVLARKN 168
                        +                 +L          + DRN  TAL ++A   
Sbjct: 205 QAAANRDF---GMMVY---------------MLNSTKLKGDIEELDRNGMTALMIVAHNE 246

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 50.5 bits (122), Expect = 1e-07
 Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 7/99 (7%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEE- 75
            +     +AL +A+     D V  LL+     D+   +  G T   YA     V+ VE  
Sbjct: 64  ILAKERESALSLASTGGYTDIVGLLLERDV--DINIYDWNGGTPLLYAVRGNHVKCVEAL 121

Query: 76  -AMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
            A   +          G  P+  A ALG R+   ++   
Sbjct: 122 LARGADLTTEA---DSGYTPMDLAVALGYRKVQQVIENH 157

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 49.0 bits (118), Expect = 3e-07
 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 6/94 (6%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAM-KG- 79
            + ++H  A    +D +KE L+      + K ++ G T   +A+  G +E V   +  G 
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLR-KGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA 60

Query: 80  NKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
           +  I      +    +  A+  G    V LL E+
Sbjct: 61  DPHIL---AKERESALSLASTGGYTDIVGLLLER 91

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 47.8 bits (115), Expect = 8e-07
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            G T L  A+    I+ V+ LL+  +  D     K   +A   A+  G  +IV 
Sbjct: 34 ERGFTPLIWASAFGEIETVRFLLEWGA--DPHILAKERESALSLASTGGYTDIVG 86

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 50.9 bits (123), Expect = 1e-07
 Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              + G T L +AA+      +++L+   +  D+   + +G +A  +AA    V+   
Sbjct: 87  ARMHDGTTPLILAARLAVEGMLEDLINSHA--DVNAVDDLGKSALHWAAAVNNVDAAV 142

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 49.3 bits (119), Expect = 4e-07
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            + +LG +ALH AA  N +D    LLK  +  +   +N    T  F AA  G  E  +
Sbjct: 120 AVDDLGKSALHWAAAVNNVDAAVVLLKNGA--NKDMQNNREETPLFLAAREGSYETAK 175

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 48.2 bits (116), Expect = 1e-06
 Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 52/180 (28%)

Query: 14  IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIV 73
           +  +    G TALH+AA+ +  D  K LL+  ++ D   ++ +G T    A  +    + 
Sbjct: 17  LHNQTDRTGETALHLAARYSRSDAAKRLLE--ASADANIQDNMGRTPLHAAVSADAQGVF 74

Query: 74  E---EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLL------------YEKT---- 114
           +        + D  M    DGT P++ AA L     +  L              K+    
Sbjct: 75  QILIRNRATDLDARMH---DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHW 131

Query: 115 ---KGSLTDDECIELLVKL---IETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKN 168
                ++   +   +L+K     +                    ++  EET L + AR+ 
Sbjct: 132 AAAVNNV---DAAVVLLKNGANKD-------------------MQNNREETPLFLAAREG 169

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 47.4 bits (114), Expect = 2e-06
 Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              N   T L +AA+    +  K LL   +  +    + +       A      +IV 
Sbjct: 153 MQNNREETPLFLAAREGSYETAKVLLDHFA--NRDITDHMDRLPRDIAQERMHHDIVR 208

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 20/166 (12%)

Query: 21  LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGN 80
           +  + L +AA+ N +  + +LLK     ++ ++  +G TA   AA    +E     M+  
Sbjct: 2   IWESPLLLAAKENDVQALSKLLKFEGC-EVHQRGAMGETALHIAALYDNLEAAMVLMEAA 60

Query: 81  KDIAMVPG----GDGTLPIVRAAALGQRQTVVLL-------YEKTKGSLTDDECIELLVK 129
            ++   P      +G   +  A        V  L         +  GS+        L+ 
Sbjct: 61  PELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYR-PHNLIY 119

Query: 130 LIETDLYAVALRLLKDRPQL-------ATKRDRNEETALHVLARKN 168
             E  L   A    ++  +L          +D    T LH+L  + 
Sbjct: 120 YGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQP 165

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLK---MMSTEDLAKKNKIGCTAFFYAAGSGMVEIV 73
          +   +G TALH+AA  + ++    L++    +  E +  +   G TA   A  +  V +V
Sbjct: 32 QRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLV 91

Query: 74 E 74
           
Sbjct: 92 R 92

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 18/117 (15%), Positives = 32/117 (27%), Gaps = 12/117 (10%)

Query: 3   AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFF 62
           A+             +   G   L  AA     + V+ L++  +  D+  ++ +G T   
Sbjct: 103 ARAT-GSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA--DIRAQDSLGNTVLH 159

Query: 63  YAAGSGMVEIVEEAMK---------GNKDIAMVPGGDGTLPIVRAAALGQRQTVVLL 110
                       +              K + +VP   G  P   A   G       L
Sbjct: 160 ILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 16/69 (23%), Positives = 22/69 (31%), Gaps = 11/69 (15%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELL-----------KMMSTEDLAKKNKIGCTAFFYAA 65
                G TALH+A     ++ V+ LL             +           G     +AA
Sbjct: 70  SELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAA 129

Query: 66  GSGMVEIVE 74
             G  EIV 
Sbjct: 130 CVGSEEIVR 138

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 49.7 bits (120), Expect = 1e-07
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              L  AA+A   D V+ L+   +  D+  ++  G T    AA +G +EIVE
Sbjct: 14 LGKKLLEAARAGRDDEVRILMA--NGADVNAEDASGWTPLHLAAFNGHLEIVE 64

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 48.9 bits (118), Expect = 3e-07
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G+T LH+AA    ++ V+ LLK  +  D+  ++K G TAF  +  +G  ++ E
Sbjct: 108 ANDMEGHTPLHLAAMFGHLEIVEVLLKNGA--DVNAQDKFGKTAFDISIDNGNEDLAE 163

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 48.9 bits (118), Expect = 3e-07
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            + + G T L +AA    ++ V+ LLK  +  D+   +  G T    AA  G +EIVE
Sbjct: 75  AVDHAGMTPLRLAALFGHLEIVEVLLKNGA--DVNANDMEGHTPLHLAAMFGHLEIVE 130

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 46.6 bits (112), Expect = 2e-06
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
               G T LH+AA    ++ V+ LLK  +  D+   +  G T    AA  G +EIVE
Sbjct: 42 AEDASGWTPLHLAAFNGHLEIVEVLLKNGA--DVNAVDHAGMTPLRLAALFGHLEIVE 97

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 50.9 bits (123), Expect = 2e-07
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 7/66 (10%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE-----EA 76
            NTALH A  A     +  LL+  +  ++  +N  G +A   A     V ++        
Sbjct: 177 KNTALHWAVLAGNTTVISLLLEAGA--NVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234

Query: 77  MKGNKD 82
            KG  +
Sbjct: 235 AKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 49.7 bits (120), Expect = 3e-07
 Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 8/61 (13%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLKMMSTE---DLAKKNKIGCTAFFYAAGSGMVEIV 73
           I +     +  A Q    +  +EL+     E   D+ + +K   T   +AA +  +++V
Sbjct: 4  HIDDYSTWDIVKATQYGIYERCRELV-----EAGYDVRQPDKENVTLLHWAAINNRIDLV 58

Query: 74 E 74
          +
Sbjct: 59 K 59

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 46.7 bits (112), Expect = 3e-06
 Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 3/98 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG-MVEIVEE 75
            I   G + +H+AAQ      V  L+      D+   ++ G T   +AA     V+    
Sbjct: 104 LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ--DVDMMDQNGMTPLMWAAYRTHSVDPTRL 161

Query: 76  AMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
            +  N  + +         +  A   G    + LL E 
Sbjct: 162 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA 199

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 46.7 bits (112), Expect = 3e-06
 Identities = 26/102 (25%), Positives = 34/102 (33%), Gaps = 12/102 (11%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE-- 74
           +      T LH AA  N ID VK  +   +  D      +  T   +A   G + +V   
Sbjct: 37  QPDKENVTLLHWAAINNRIDLVKYYISKGAIVD-QLGGDLNSTPLHWATRQGHLSMVVQL 95

Query: 75  ---EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
               A     D      G+G   I  AA  G    V  L  K
Sbjct: 96  MKYGADPSLID------GEGCSCIHLAAQFGHTSIVAYLIAK 131

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 48.9 bits (118), Expect = 2e-07
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
               L  TALH A + N  + V+ L+K     D+  ++K   TAF  +  +G  ++ E
Sbjct: 95  AKDMLKMTALHWATEHNHQEVVELLIK--YGADVHTQSKFCKTAFDISIDNGNEDLAE 150

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 48.5 bits (117), Expect = 3e-07
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             T +  T LH+AA     + V+ LLK  +  D+  K+ +  TA  +A      E+VE
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGA--DVNAKDMLKMTALHWATEHNHQEVVE 117

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 47.8 bits (115), Expect = 6e-07
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           LG + LH+AAQ       + LL+         + K+  T    AA  G   IVE
Sbjct: 32 WLGTSPLHLAAQYGHFSTTEVLLRAGV--SRDARTKVDRTPLHMAASEGHANIVE 84

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 46.2 bits (111), Expect = 2e-06
 Identities = 12/58 (20%), Positives = 18/58 (31%), Gaps = 13/58 (22%)

Query: 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAK-----KNKIGCTAFFYAAGSGMVEIVE 74
              L  AA+A   D V+ L+                + +G +    AA  G     E
Sbjct: 2  LGKKLLEAARAGQDDEVRILMA--------NGAPFTTDWLGTSPLHLAAQYGHFSTTE 51

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 50.9 bits (123), Expect = 2e-07
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELL--------KMMSTEDLAKKNKIGCTAFFYAAGSG 68
           E    G TA   AA    +  +K L         +  + ED  +  K G TA   AA  G
Sbjct: 100 ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 159

Query: 69  MVEIVE 74
            VE+++
Sbjct: 160 HVEVLK 165

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 50.2 bits (121), Expect = 4e-07
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G T   +AA A  +  +K  L   +  D+ + +  G TAF  AA  G V+ ++
Sbjct: 67  LRKKNGATPFLLAAIAGSVKLLKLFLSKGA--DVNECDFYGFTAFMEAAVYGKVKALK 122

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 48.6 bits (117), Expect = 1e-06
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G T L +A +   +  V+ LL+     ++   +  G TA   A    + +I E
Sbjct: 214 VRGERGKTPLILAVEKKHLGLVQRLLEQEHI-EINDTDSDGKTALLLAVELKLKKIAE 270

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 48.2 bits (116), Expect = 1e-06
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            G T LH A Q +  D V+ LL+  +  D   + K G T F  AA +G V++++
Sbjct: 37 EGGWTPLHNAVQMSREDIVELLLRHGA--DPVLRKKNGATPFLLAAIAGSVKLLK 89

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 47.9 bits (115), Expect = 2e-06
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 5   DIYDKYEDEIGQE-ITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFY 63
           ++  + + +  QE +   G TAL  AA+   ++ +K LL  M   D+   + +G  A  +
Sbjct: 130 NVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA-DVNACDNMGRNALIH 188

Query: 64  AAGSGMVEIVEEAMK 78
           A  S     VE    
Sbjct: 189 ALLSSDDSDVEAITH 203

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 47.5 bits (114), Expect = 3e-06
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 22 GNTALHVAAQANCIDFVKELLKM-MSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           N  L  A Q   +D V++LL+   +     ++ + G T    A      +IVE
Sbjct: 5  DNHLLIKAVQNEDVDLVQQLLEGGANVN--FQEEEGGWTPLHNAVQMSREDIVE 56

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 49.4 bits (119), Expect = 2e-07
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 13 EIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEI 72
           I  ++ +   T    AA+      + +LL+     D+   ++ G TA  + AG G  + 
Sbjct: 35 YIAADVVSEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKC 91

Query: 73 VE 74
          V 
Sbjct: 92 VR 93

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 46.3 bits (111), Expect = 2e-06
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE---- 74
              G TALH+AA     + V+ L+++ +  D+  +++ G TA   A              
Sbjct: 107 MRGGLTALHMAAGYVRPEVVEALVELGA--DIEVEDERGLTALELAREILKTTPKGNPMQ 164

Query: 75  -EAMKGNKDIA 84
                G + + 
Sbjct: 165 FGRRIGLEKVI 175

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            +   G TAL   A       V+ L +  +  D  +  + G TA   AAG    E+VE
Sbjct: 71  AVDENGRTALLFVAGLGSDKCVRLLAEAGADLD-HRDMRGGLTALHMAAGYVRPEVVE 127

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 39.0 bits (92), Expect = 8e-04
 Identities = 14/98 (14%), Positives = 28/98 (28%), Gaps = 15/98 (15%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG 79
             G     +  +                   A       T ++ AA     + + + ++ 
Sbjct: 12  GEGAMEYLIEWKDGHSPSWVPSS-----YIAADVVSEYETPWWTAARKADEQALSQLLED 66

Query: 80  ---N-KDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
              +  D       +G   ++  A LG  + V LL E 
Sbjct: 67  RDVDAVD------ENGRTALLFVAGLGSDKCVRLLAEA 98

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 51.3 bits (124), Expect = 2e-07
 Identities = 28/127 (22%), Positives = 42/127 (33%), Gaps = 34/127 (26%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEE--- 75
              G T LHVA+    +  VK LL+  +       N    T    AA +G  E+ +    
Sbjct: 11  GESGLTPLHVASFMGHLPIVKNLLQRGA--SPNVSNVKVETPLHMAARAGHTEVAKYLLQ 68

Query: 76  -------------------AMKGNKDIAM----------VPGGDGTLPIVRAAALGQRQT 106
                              A  G+ ++            +    G  P+  AA  G  +T
Sbjct: 69  NKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVET 128

Query: 107 VVLLYEK 113
           V+ L EK
Sbjct: 129 VLALLEK 135

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 51.3 bits (124), Expect = 2e-07
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             T  G+T LH+AA+   ++ V  LL+  +    A   K G T    AA  G V + E
Sbjct: 108 LATTAGHTPLHIAAREGHVETVLALLEKEA--SQACMTKKGFTPLHVAAKYGKVRVAE 163

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 50.6 bits (122), Expect = 5e-07
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G T LH+AA+ N ++  + LL+         ++  G T    AA  G  E+V 
Sbjct: 207 SPAWNGYTPLHIAAKQNQVEVARSLLQYGG--SANAESVQGVTPLHLAAQEGHAEMVA 262

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 50.2 bits (121), Expect = 5e-07
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             +  G T LH+AAQ    + V  LL   +  +    NK G T     A  G V + +
Sbjct: 240 AESVQGVTPLHLAAQEGHAEMVALLLSKQA--NGNLGNKSGLTPLHLVAQEGHVPVAD 295

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 49.4 bits (119), Expect = 1e-06
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           T +G T LHVA+    I  VK LL+     D+  K K+G +    AA  G  +IV 
Sbjct: 308 TRMGYTPLHVASHYGNIKLVKFLLQ--HQADVNAKTKLGYSPLHQAAQQGHTDIVT 361

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 48.6 bits (117), Expect = 1e-06
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           T LG + LH AAQ    D V  LLK  +     + +  G T    A   G + + +
Sbjct: 341 TKLGYSPLHQAAQQGHTDIVTLLLKNGA--SPNEVSSDGTTPLAIAKRLGYISVTD 394

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                G T LHVA   N +D VK LL              G T    AA    VE+  
Sbjct: 174 AAGKNGLTPLHVAVHHNNLDIVKLLLPRGG--SPHSPAWNGYTPLHIAAKQNQVEVAR 229

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 47.5 bits (114), Expect = 4e-06
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              G T LH+ AQ   +     L+K      +    ++G T    A+  G +++V+
Sbjct: 275 NKSGLTPLHLVAQEGHVPVADVLIKHGV--MVDATTRMGYTPLHVASHYGNIKLVK 328

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 50.1 bits (121), Expect = 2e-07
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              N  N  LH AA + C+D  + LL      DL   N  G +    AA     + V 
Sbjct: 139 IRDNEENICLHWAAFSGCVDIAEILLAAKC--DLHAVNIHGDSPLHIAARENRYDCVV 194

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 50.1 bits (121), Expect = 3e-07
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              G+T LH+AA+    + V+ LL      D+  ++  G T   +A     V++V+
Sbjct: 74  DAEGSTCLHLAAKKGHYEVVQYLLSNGQM-DVNCQDDGGWTPMIWATEYKHVDLVK 128

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 49.7 bits (120), Expect = 4e-07
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            +    T L  AA+ N ++ VK L+K  +   +  K+  G T    AA  G  E+V+
Sbjct: 39 TCSEDQRTPLMEAAENNHLEAVKYLIKAGA--LVDPKDAEGSTCLHLAAKKGHYEVVQ 94

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 48.6 bits (117), Expect = 9e-07
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
            +   G++ LH+AA+ N  D V   L   S  D+  KNK G T    A+ +  V    + 
Sbjct: 172 AVNIHGDSPLHIAARENRYDCVVLFLSRDS--DVTLKNKEGETPLQCASLNSQVWSALQM 229

Query: 77  MKGNKDIA 84
            K  +D A
Sbjct: 230 SKALQDSA 237

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 47.4 bits (114), Expect = 2e-06
 Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
               + LH AA+A  +D    L++  +  ++   ++   T    AA +  +E V+
Sbjct: 8  HQNKRSPLHAAAEAGHVDICHMLVQ--AGANIDTCSEDQRTPLMEAAENNHLEAVK 61

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 47.0 bits (113), Expect = 3e-06
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 13/100 (13%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE---- 74
            + G T +  A +   +D VK LL   S  D+  ++        +AA SG V+I E    
Sbjct: 108 DDGGWTPMIWATEYKHVDLVKLLLSKGS--DINIRDNEENICLHWAAFSGCVDIAEILLA 165

Query: 75  -EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
            +      +I       G  P+  AA   +   VVL   +
Sbjct: 166 AKCDLHAVNI------HGDSPLHIAARENRYDCVVLFLSR 199

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 48.1 bits (116), Expect = 3e-07
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          G T LH+AA+   ++ VK LL+  +  D+  K+K G T    AA +G +E+V+
Sbjct: 2  GRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTPLHLAARNGHLEVVK 52

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 47.7 bits (115), Expect = 4e-07
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              G T LH+AA+   ++ VK LL+  +  D+  K+K G T    AA +G +E+V+
Sbjct: 65  DKNGRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTPLHLAARNGHLEVVK 118

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 47.3 bits (114), Expect = 5e-07
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             G T LH+AA+   ++ VK LL+  +  D+  K+K G T    AA +G +E+V+
Sbjct: 32 DKNGRTPLHLAARNGHLEVVKLLLE--AGADVNAKDKNGRTPLHLAARNGHLEVVK 85

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 48.2 bits (116), Expect = 3e-07
 Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG 79
              ++ LH AA+   +D VK LL           N  G     Y     M  ++    K 
Sbjct: 74  YQNDSPLHDAAKNGHVDIVKLLLS--YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 46.3 bits (111), Expect = 1e-06
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          + G T LH+A+    I  V+ LL+  S  D   K+  G T    A   G +++VE
Sbjct: 8  HRGETLLHIASIKGDIPSVEYLLQNGS--DPNVKDHAGWTPLHEACNHGHLKVVE 60

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 45.9 bits (110), Expect = 2e-06
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          + G T LH A     +  V+ LL+      +        +    AA +G V+IV+
Sbjct: 41 HAGWTPLHEACNHGHLKVVELLLQ--HKALVNTTGYQNDSPLHDAAKNGHVDIVK 93

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 48.2 bits (116), Expect = 3e-07
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            +  +G T LH+AA    ++  + LLK     D+  ++K G TAF  + G+G  ++ E
Sbjct: 75  AVDAIGFTPLHLAAFIGHLEIAEVLLK--HGADVNAQDKFGKTAFDISIGNGNEDLAE 130

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 47.8 bits (115), Expect = 4e-07
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 17 EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
               G T L++A     ++ V+ LLK  +  D+   + IG T    AA  G +EI E
Sbjct: 42 AKDEYGLTPLYLATAHGHLEIVEVLLKNGA--DVNAVDAIGFTPLHLAAFIGHLEIAE 97

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 47.0 bits (113), Expect = 8e-07
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              L  AA+A   D V+ L+   +  D+  K++ G T  + A   G +EIVE
Sbjct: 14 LGKKLLEAARAGQDDEVRILMA--NGADVNAKDEYGLTPLYLATAHGHLEIVE 64

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 48.9 bits (118), Expect = 3e-07
 Identities = 15/94 (15%), Positives = 36/94 (38%), Gaps = 7/94 (7%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAM-KG- 79
            + ++H  A    + ++   ++      +   ++ G T   +AA  G + +VE  +  G 
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIE--QENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA 60

Query: 80  NKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
           +  +    G      +  A + G    V +L + 
Sbjct: 61  DPQLL---GKGRESALSLACSKGYTDIVKMLLDC 91

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 47.8 bits (115), Expect = 6e-07
 Identities = 22/102 (21%), Positives = 34/102 (33%), Gaps = 13/102 (12%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE-- 74
            +     +AL +A      D VK LL      D+ + +  G T   YA     V+ V+  
Sbjct: 64  LLGKGRESALSLACSKGYTDIVKMLLD--CGVDVNEYDWNGGTPLLYAVHGNHVKCVKML 121

Query: 75  ---EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
               A    +         G   +  A ALG R    ++   
Sbjct: 122 LESGADPTIETD------SGYNSMDLAVALGYRSVQQVIESH 157

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 47.4 bits (114), Expect = 9e-07
 Identities = 23/99 (23%), Positives = 34/99 (34%), Gaps = 13/99 (13%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEE---- 75
             G T L  AA    I  V+ LL+  +  D     K   +A   A   G  +IV+     
Sbjct: 34  EEGFTPLMWAAAHGQIAVVEFLLQ--NGADPQLLGKGRESALSLACSKGYTDIVKMLLDC 91

Query: 76  -AMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
                  D       +G  P++ A      + V +L E 
Sbjct: 92  GVDVNEYDW------NGGTPLLYAVHGNHVKCVKMLLES 124

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 50.6 bits (122), Expect = 4e-07
 Identities = 35/184 (19%), Positives = 56/184 (30%), Gaps = 46/184 (25%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEE- 75
                 +T LH+AA  N +  V+ LL+  +  D+  K+K G      A   G  E+ E  
Sbjct: 53  ASDGRKSTPLHLAAGYNRVRIVQLLLQHGA--DVHAKDKGGLVPLHNACSYGHYEVTELL 110

Query: 76  ---------------------AMKGNKDIAMV----------PGGDGTLPIVRAAALGQR 104
                                A K   ++  +              G   +  A     R
Sbjct: 111 LKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELR 170

Query: 105 QTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVL 164
           + +   ++             LL    E DL  V   L  +      K+ ++ ETALH  
Sbjct: 171 ERLTYEFKGHS----------LLQAAREADLAKVKKTLALEII--NFKQPQSHETALHCA 218

Query: 165 ARKN 168
               
Sbjct: 219 VASL 222

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 46.7 bits (112), Expect = 5e-06
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           E      T LHVAA+    D ++ L K      +   + +G TA   AA +G ++   
Sbjct: 242 EKNKDFMTPLHVAAERAHNDVMEVLHK--HGAKMNALDSLGQTALHRAALAGHLQTCR 297

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
            + +LG TALH AA A  +   + LL   S  D +  +  G TA      +    + E  
Sbjct: 275 ALDSLGQTALHRAALAGHLQTCRLLLSYGS--DPSIISLQGFTAAQMGNEAVQQILSEST 332

Query: 77  MKGNKDI 83
                D+
Sbjct: 333 PMRTSDV 339

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 48.9 bits (118), Expect = 4e-07
 Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
          +   T L VA      + + +L++      L  K+  G TA  +A  +  + I E
Sbjct: 33 SYNRTPLMVACMLGMENAIDKLVENFD--KLEDKDIEGSTALIWAVKNNRLGIAE 85

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 47.4 bits (114), Expect = 1e-06
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             G T L  +      +    LL+  +  ++  +N  G T    A+  G  EIV+
Sbjct: 99  FSGKTPLMWSIIFGYSEMSYFLLEHGA--NVNDRNLEGETPLIVASKYGRSEIVK 151

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 47.4 bits (114), Expect = 1e-06
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             G+TAL  A + N +   ++LL   S  ++  K+  G T   ++   G  E+  
Sbjct: 66  IEGSTALIWAVKNNRLGIAEKLLSKGS--NVNTKDFSGKTPLMWSIIFGYSEMSY 118

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 45.8 bits (110), Expect = 5e-06
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             G T L VA++    + VK+LL++ +  D++ ++  G TA   A   G  E+++
Sbjct: 132 LEGETPLIVASKYGRSEIVKKLLELGA--DISARDLTGLTAEASARIFGRQEVIK 184

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 41.2 bits (98), Expect = 2e-04
 Identities = 8/63 (12%), Positives = 19/63 (30%), Gaps = 14/63 (22%)

Query: 15 GQEITNLGNTALHVAAQANC---IDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVE 71
          G  +   G     +  + +    +DF++             ++    T    A   GM  
Sbjct: 1  GSHMDKNGEIVEKIKDEKSINQNLDFLRN-----------YRDSYNRTPLMVACMLGMEN 49

Query: 72 IVE 74
           ++
Sbjct: 50 AID 52

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 49.8 bits (120), Expect = 5e-07
 Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            IT    + LH A     +  VK LLK  +   +        T  F A  SG  + V 
Sbjct: 87  IITADHVSPLHEACLGGHLSCVKILLKHGA--QVNGVTADWHTPLFNACVSGSWDCVN 142

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 48.3 bits (116), Expect = 1e-06
 Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           +  +   + +H AA+   ++ V  L+      ++  K     T  + A  +     V+
Sbjct: 152 QPESDLASPIHEAARRGHVECVNSLIAYGG--NIDHKISHLGTPLYLACENQQRACVK 207

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 7/60 (11%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAK--KNKIGCTAFFYAAGSGMVEIVE 74
              +   T L++A +      VK+LL     E  A   + K   +       +   E+  
Sbjct: 185 HKISHLGTPLYLACENQQRACVKKLL-----ESGADVNQGKGQDSPLHAVVRTASEELAC 239

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 7/53 (13%), Positives = 16/53 (30%), Gaps = 2/53 (3%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             + +H AA       ++ L+       +        +    A   G +  V+
Sbjct: 59  DWSPMHEAAIHGHQLSLRNLISQGW--AVNIITADHVSPLHEACLGGHLSCVK 109

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 7/54 (12%), Positives = 15/54 (27%), Gaps = 2/54 (3%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIV 73
              ++ LH   +    +    L+   +  D   KN  G            +  +
Sbjct: 220 KGQDSPLHAVVRTASEELACLLMDFGA--DTQAKNAEGKRPVELVPPESPLAQL 271

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 15/60 (25%), Positives = 20/60 (33%), Gaps = 7/60 (11%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKI--GCTAFFYAAGSGMVEIVE 74
            +T   +T L  A  +   D V  LL     +  A         +    AA  G VE V 
Sbjct: 120 GVTADWHTPLFNACVSGSWDCVNLLL-----QHGASVQPESDLASPIHEAARRGHVECVN 174

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 46.7 bits (112), Expect = 9e-07
 Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 3/92 (3%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81
            +  L  AA    ++ V++LL+  +  D    N+ G          G  ++ E  +    
Sbjct: 12  SDAGLATAAARGQVETVRQLLEAGA--DPNALNRFGRRPIQVMM-MGSAQVAELLLLHGA 68

Query: 82  DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
           +         T P+  AA  G   T+V+L+  
Sbjct: 69  EPNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 42.4 bits (101), Expect = 3e-05
 Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 3/57 (5%)

Query: 19  TNLGNT-ALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                T  +H AA+   +D +  L +  +   L   +  G      A   G  +I  
Sbjct: 74  DPATLTRPVHDAAREGFLDTLVVLHRAGA--RLDVCDAWGRLPVDLAEEQGHRDIAR 128

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 38.2 bits (90), Expect = 7e-04
 Identities = 17/100 (17%), Positives = 27/100 (27%), Gaps = 15/100 (15%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCT-AFFYAAGSGMVEIVE---- 74
             G   + V          + LL   +  +    +    T     AA  G ++ +     
Sbjct: 43  RFGRRPIQVMMM-GSAQVAELLLLHGA--EPNCADPATLTRPVHDAAREGFLDTLVVLHR 99

Query: 75  -EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
             A     D        G LP+  A   G R     L+  
Sbjct: 100 AGARLDVCD------AWGRLPVDLAEEQGHRDIARYLHAA 133

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 48.7 bits (117), Expect = 1e-06
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIG-CTAFFYAAGSGMVEIVEE 75
           +  + GNTAL+ A  +  +  VK  +K      L    K G  T+F++A     V IV  
Sbjct: 90  QFDDKGNTALYYAVDSGNMQTVKLFVKKNW--RLMFYGKTGWKTSFYHAVMLNDVSIVSY 147

Query: 76  AM-KGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
            + +      +         I      G    ++LL + 
Sbjct: 148 FLSEIPSTFDL---AILLSCIHITIKNGHVDMMILLLDY 183

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 47.9 bits (115), Expect = 2e-06
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
               LH AA       VK LL      D ++ +  G TA +YA  SG ++ V+
Sbjct: 62  NEFPLHQAATLEDTKIVKILLFSGL--DDSQFDDKGNTALYYAVDSGNMQTVK 112

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 6/57 (10%)

Query: 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKI-GCTAFFYAAGSGMVEIVE 74
             G++A + A   N +  V  LL        A KN +        AA     +IV+
Sbjct: 28 DVHGHSASYYAIADNNVRLVCTLLNA-----GALKNLLENEFPLHQAATLEDTKIVK 79

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 12/82 (14%)

Query: 5   DIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLK------------MMSTEDLAK 52
               ++ +   +++   G TALH+A +  C  +V+ L++                +D   
Sbjct: 76  GNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGG 135

Query: 53  KNKIGCTAFFYAAGSGMVEIVE 74
               G      AA +    IV 
Sbjct: 136 YFYFGELPLSLAACTNQPHIVH 157

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 1/67 (1%)

Query: 3   AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTE-DLAKKNKIGCTAF 61
           A+     ++ +        G   L +AA  N    V  L +    + DL +++  G T  
Sbjct: 121 AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVL 180

Query: 62  FYAAGSG 68
                  
Sbjct: 181 HALVAIA 187

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 14/69 (20%)

Query: 20  NLGNTALHVAAQA--NCIDFVKELLKMMS------------TEDLAKKNKIGCTAFFYAA 65
           + GNT LH       N  +  K + KM              T   A  N  G +    AA
Sbjct: 174 SRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAA 233

Query: 66  GSGMVEIVE 74
            +G + I +
Sbjct: 234 KTGKIGIFQ 242

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 47.3 bits (112), Expect = 3e-06
 Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 2/105 (1%)

Query: 22  GNTALHVAAQ-ANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGN 80
             TALH+A +  +          + ++ +L K+   G TA  Y   +   E ++  ++G 
Sbjct: 169 DETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK 228

Query: 81  KDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIE 125
             I +     G  P+  A  L       LL +   G       +E
Sbjct: 229 ASIEIAN-ESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVE 272

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 5/67 (7%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE---E 75
           T  G+TALH     +  + +K LL+      +   N+ G T    A         E   +
Sbjct: 202 TGKGSTALHYCCLTDNAECLKLLLR--GKASIEIANESGETPLDIAKRLKHEHCEELLTQ 259

Query: 76  AMKGNKD 82
           A+ G  +
Sbjct: 260 ALSGRFN 266

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 45.5 bits (109), Expect = 3e-06
 Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 3/95 (3%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMK 78
                  L  AA    ++ V+ LL+  +  +    N  G          G   + E  + 
Sbjct: 9   MEPSADWLATAAARGRVEEVRALLE--AGANPNAPNSYGRRPIQVMM-MGSARVAELLLL 65

Query: 79  GNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
              +         T P+  AA  G   T+V+L+  
Sbjct: 66  HGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 42.8 bits (102), Expect = 3e-05
 Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 3/57 (5%)

Query: 19  TNLGNT-ALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
                T  +H AA+   +D +  L +  +   L  ++  G      A   G  ++  
Sbjct: 74  DPATLTRPVHDAAREGFLDTLVVLHRAGA--RLDVRDAWGRLPVDLAEELGHRDVAR 128

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 46.2 bits (109), Expect = 9e-06
 Identities = 30/168 (17%), Positives = 54/168 (32%), Gaps = 21/168 (12%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG-------MVEI 72
             GNT LH       ++ VK L+K  S  +    + +G +    A  S           +
Sbjct: 129 EHGNTPLHWLTSIANLELVKHLVKHGS--NRLYGDNMGESCLVKAVKSVNNYDSGTFEAL 186

Query: 73  VEE--AMKGNKD---------IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDD 121
           ++        +D         I +  G  G     +         +V    +   S T++
Sbjct: 187 LDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNE 246

Query: 122 ECIELLVKLIETDLYAVALRLLKDRPQLAT-KRDRNEETALHVLARKN 168
           +  +   K  E     +    LK         +D N +T L++ AR  
Sbjct: 247 KESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLG 294

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 45.4 bits (107), Expect = 1e-05
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGS 67
           + G+T L++AA+   I  V  LL   +  D    NK G     + AG 
Sbjct: 281 SNGDTCLNIAARLGNISIVDALLDYGA--DPFIANKSGLRPVDFGAGL 326

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 16/127 (12%)

Query: 3   AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTE-DLAKKNKIGCTAF 61
           A    D ++   G+     G   L +AA  N +  VK LL+      D++ ++ +G T  
Sbjct: 129 AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVL 188

Query: 62  FYAAGSGMVEIVEEAMK---------------GNKDIAMVPGGDGTLPIVRAAALGQRQT 106
                     +                         +  +    G  P+  AA+ G+   
Sbjct: 189 HALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGV 248

Query: 107 VVLLYEK 113
           +  + ++
Sbjct: 249 LAYILQR 255

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 37/224 (16%), Positives = 57/224 (25%), Gaps = 47/224 (20%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMS------TEDLAKKNKIGCTAFFYA---AGSGMVEI 72
              ++  A   +    ++ LL  +       T+   K  + G T    A     +G  + 
Sbjct: 13  DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDT 72

Query: 73  VEEAMKGNKDIAMVP----------GGDGTLPIVRAAALGQRQTVVLLYE-------KTK 115
           +   +   +    +              G   +  A        V LL E          
Sbjct: 73  IALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAAN 132

Query: 116 GSLTDDECIELLVKLIETDLYAVALR--------LLKDRPQLA--TKRDRNEETALHVLA 165
           G               E  L   A          LL++  Q A  + RD    T LH L 
Sbjct: 133 GDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALV 192

Query: 166 RKNLTSSNQNPCGVENVVP-----------KKLAEAINTGGLTP 198
                + +                       KL E  N  GLTP
Sbjct: 193 EVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTP 236

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 39/204 (19%), Positives = 58/204 (28%), Gaps = 45/204 (22%)

Query: 20  NLGNTALHVAA---QANCIDFVKELL---------KMMSTEDLAKKNKIGCTAFFYAAGS 67
           + G T L  A    Q      +  LL         K +       +   G +A   A   
Sbjct: 41  STGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEK 100

Query: 68  GMVEIVE---------EAMKGNKDIAMVPGG---DGTLPIVRAAALGQRQTVVLLYEKTK 115
             ++ V+               +      G     G LP+  AA   Q   V  L E   
Sbjct: 101 RSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE--N 158

Query: 116 GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQN 175
                   +E    L  T L+A+ +             +  E +AL +     L      
Sbjct: 159 PHQPAS--LEATDSLGNTVLHALVMI----------ADNSPENSALVIHMYDGLLQM--- 203

Query: 176 PCGVENVVPK-KLAEAINTGGLTP 198
                 + P  +L E  N  GLTP
Sbjct: 204 ---GARLCPTVQLEEISNHQGLTP 224

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 18/115 (15%), Positives = 34/115 (29%), Gaps = 18/115 (15%)

Query: 16  QEITNLGNTALHVAAQANCIDFVKELLKMMSTE-DLAKKNKIGCT--------------- 59
                 G   L +AA     D V  LL+       L   + +G T               
Sbjct: 130 GTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPEN 189

Query: 60  -AFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
            A       G++++        +    +    G  P+  AA  G+ +    + ++
Sbjct: 190 SALVIHMYDGLLQMGARLCPTVQLEE-ISNHQGLTPLKLAAKEGKIEIFRHILQR 243

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 9/60 (15%), Positives = 20/60 (33%), Gaps = 5/60 (8%)

Query: 20  NLGNTALHVAAQANCIDFVK--ELLKMMSTE---DLAKKNKIGCTAFFYAAGSGMVEIVE 74
                 +        +D  +   L K++ ++    L  K+K G TA  +         ++
Sbjct: 112 KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALK 171

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 13/60 (21%), Positives = 18/60 (30%), Gaps = 4/60 (6%)

Query: 19  TNLGNTALHVAAQANCIDFVK--ELLKMMSTE--DLAKKNKIGCTAFFYAAGSGMVEIVE 74
           T  G T      Q    D     EL K+   +  D+    K      F    +  V+  E
Sbjct: 72  TKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENE 131

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 9e-05
 Identities = 26/215 (12%), Positives = 65/215 (30%), Gaps = 55/215 (25%)

Query: 121 DECIELLVKLIETDLYAVALRLLKD--RPQ-----------LATKRDRNEETALHVLARK 167
                 L +L+++  Y   L +L +    +           L T R +     L      
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287

Query: 168 NLTSSNQNPCGVE------------NVVPKKLAEAINTGGLTPTALFSEKHKELKRKGET 215
           ++ S + +   +             +  P+ L   + T      ++ +E  ++     + 
Sbjct: 288 HI-SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346

Query: 216 WMKDTASSCMIVATLIATIVFAAAITVPGGNKEDTGLPFFRQKASFKIFAV--SNVISLV 273
           W      +C  + T+I + +                L     +  F   +V   +    +
Sbjct: 347 WKH---VNCDKLTTIIESSL--------------NVLEPAEYRKMFDRLSVFPPSA--HI 387

Query: 274 ASSVSIVNFLSIV---APRYAEEDFLHLLPRKLLV 305
            + +     LS++     +      ++ L +  LV
Sbjct: 388 PTIL-----LSLIWFDVIKSDVMVVVNKLHKYSLV 417

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           GNTALH AA  N  D +K LLK      +   N+ G TA   A      E  E
Sbjct: 226 GNTALHYAALYNQPDCLKLLLK--GRALVGTVNEAGETALDIARKKHHKECEE 276

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	375
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.98
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.98
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.98
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.98
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.98
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.97
2rfa_A	232	Transient receptor potential cation channel subfa	99.97
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.97
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.97
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.97
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.97
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.97
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.97
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.97
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.97
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.97
2etb_A	256	Transient receptor potential cation channel subfam	99.97
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.97
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.97
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.97
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.97
2etb_A	256	Transient receptor potential cation channel subfam	99.97
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.97
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.97
2pnn_A	273	Transient receptor potential cation channel subfa	99.97
2pnn_A	273	Transient receptor potential cation channel subfa	99.97
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.97
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.96
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.96
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.96
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.96
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.96
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.96
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.96
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.96
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.96
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.96
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.96
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.96
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.96
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.96
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.95
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.95
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.95
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.95
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.95
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.94
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.94
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.94
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.94
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.94
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.94
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.94
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.94
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.94
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.94
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.94
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.94
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.92
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.92
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.92
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.92
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.91
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.91
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.91
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.9
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.9
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.9
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.9
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.9
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.9
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.89
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.89
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.89
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.89
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.89
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.88
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.88
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.86
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.86
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.85
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.84
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.84
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.83
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.83
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.82
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.82
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.81
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.8
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.78
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.73

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=2.8e-35  Score=259.91  Aligned_cols=196  Identities=18%  Similarity=0.147  Sum_probs=181.9

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      .+++++...+..++.. |.+|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus        21 ~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~   97 (231)
T 3aji_A           21 ELKERILADKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQL--GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGA   97 (231)
T ss_dssp             HHHHHHHHCGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             HHHHHHHhchhhhhcC-CCCCCCHHHHHHHcCcHHHHHHHHHh--CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCC
Confidence            4667777777777776 99999999999999999999999999  88999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      ++ +.+|.+|.||||+|+..|+.+++++|++.+. .+.+|..|.||||.|+..|+.+++++|++. +.+++.+|.+|+||
T Consensus        98 ~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~  175 (231)
T 3aji_A           98 HV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY-KASTNIQDTEGNTP  175 (231)
T ss_dssp             CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCH
T ss_pred             CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCCH
Confidence            96 8899999999999999999999999999998 888999999999999999999999999997 99999999999999


Q ss_pred             HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHHHH
Q 037666          161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHKEL  209 (375)
Q Consensus       161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~~l  209 (375)
                      ||+|++.++.       ++.++|  .+++++.+|.+|+||+++|.+.+...
T Consensus       176 L~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~  219 (231)
T 3aji_A          176 LHLACDEERV-------EEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLI  219 (231)
T ss_dssp             HHHHHHTTCH-------HHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHH
T ss_pred             HHHHHHCCCH-------HHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHH
Confidence            9999999987       788877  77889999999999999998766543

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=1.6e-35  Score=265.78  Aligned_cols=196  Identities=20%  Similarity=0.179  Sum_probs=170.4

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.+.|.++|.+++...|.+|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus        37 ~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~  114 (253)
T 1yyh_A           37 AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA  114 (253)
T ss_dssp             ---------------CCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred             HHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            4567788899998776689999999999999999999999999  89999999999999999999999999999999988


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      ...+.+|.+|.||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+..|+.+++++|++. |.+++.+|.+|+||
T Consensus       115 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tp  193 (253)
T 1yyh_A          115 TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETP  193 (253)
T ss_dssp             SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred             CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCH
Confidence            4358899999999999999999999999999998 888999999999999999999999999998 99999999999999


Q ss_pred             HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHH
Q 037666          161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHK  207 (375)
Q Consensus       161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~  207 (375)
                      ||+|++.++.       ++.++|  .+++++.+|..|+||+++|.+...
T Consensus       194 L~~A~~~~~~-------~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~  235 (253)
T 1yyh_A          194 LFLAAREGSY-------ETAKVLLDHFANRDITDHMDRLPRDIAQERMH  235 (253)
T ss_dssp             HHHHHHHTCH-------HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             HHHHHHCCCH-------HHHHHHHHcCCCccccccCCCCHHHHHHHcCC
Confidence            9999999988       888887  788999999999999999987643

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=1.9e-35  Score=268.45  Aligned_cols=196  Identities=17%  Similarity=0.087  Sum_probs=160.4

Q ss_pred             HHHHHHhhCccc---cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHc
Q 037666            2 VAKDIYDKYEDE---IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMK   78 (375)
Q Consensus         2 ~v~~lL~~~~~~---~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~   78 (375)
                      +++++|.++|.+   ++.. |..|+||||+|+..|+.+++++|+++  +++++.+|..|+||||+|+..|+.+++++|++
T Consensus        23 ~~v~~Ll~~g~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~   99 (282)
T 1oy3_D           23 PFLDFLLGFSAGHEYLDLQ-NDLGQTALHLAAILGEASTVEKLYAA--GAGVLVAERGGHTALHLACRVRAHTCACVLLQ   99 (282)
T ss_dssp             HHHHHHHHHHTTSGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSS
T ss_pred             HHHHHHHhcCCCccccccc-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCcchhHhhhc
Confidence            466778877777   7776 88999999999999999999999999  89999999999999999999999999999998


Q ss_pred             cCCCC----------------------------------------------ccccCCCCChHHHHHHHcCcHHHHHHHHH
Q 037666           79 GNKDI----------------------------------------------AMVPGGDGTLPIVRAAALGQRQTVVLLYE  112 (375)
Q Consensus        79 ~~~~~----------------------------------------------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~  112 (375)
                      .+++.                                              .+.+|..|.||||+|+..|+.+++++|++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  179 (282)
T 1oy3_D          100 PRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD  179 (282)
T ss_dssp             SCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             cCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence            77541                                              25678889999999999999999999999


Q ss_pred             hcc-CCcccc-hhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhH
Q 037666          113 KTK-GSLTDD-ECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLA  188 (375)
Q Consensus       113 ~~~-~~~~d~-~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~  188 (375)
                      .++ ++..+. .|+||||+|+++|+.+++++|+++ |.+++.+|.+|+||||+|++.++.       ++.++|  +++++
T Consensus       180 ~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~-------~~v~~Ll~~ga~~  251 (282)
T 1oy3_D          180 AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLRPNP-------ILARLLRAHGAPE  251 (282)
T ss_dssp             HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTSSCH-------HHHHHHHHTTCCC
T ss_pred             cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHHcCCc-------HHHHHHHHcCCCc
Confidence            998 777664 499999999999999999999998 999999999999999999999887       888887  78899


Q ss_pred             hhhcCCCCChhhhhHHHHHH
Q 037666          189 EAINTGGLTPTALFSEKHKE  208 (375)
Q Consensus       189 ~~~n~~g~tpl~~a~~~~~~  208 (375)
                      +.+|.+|.||++++.....+
T Consensus       252 ~~~~~~g~tpl~~a~~~~~~  271 (282)
T 1oy3_D          252 PEDGGDKLSPCSSSGSDSDS  271 (282)
T ss_dssp             CCCC----------------
T ss_pred             CcCCCcccccccccCCcccc
Confidence            99999999999998765543

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=1.3e-34  Score=256.63  Aligned_cols=195  Identities=21%  Similarity=0.145  Sum_probs=179.2

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.++|.++|.+++.. |.+|+||||+|+..|+.+++++|+++  +.+++.+|..|.||||+|+..|+.+++++|++.++
T Consensus        25 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~  101 (237)
T 3b7b_A           25 DICHMLVQAGANIDTC-SEDQRTPLMEAAENNHLEAVKYLIKA--GALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ  101 (237)
T ss_dssp             HHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTT--TCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred             HHHHHHHHcCCCcCcc-CCCCCCHHHHHHHhCCHHHHHHHHhC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence            4677888899999987 89999999999999999999999999  88999999999999999999999999999999984


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      ...+.+|..|.||||+|+..|+.+++++|++.++ ++.+|.+|+||||.|+..|+.+++++|++. +.+++.+|.+|+||
T Consensus       102 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~  180 (237)
T 3b7b_A          102 MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAA-KCDLHAVNIHGDSP  180 (237)
T ss_dssp             CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTT-TCCTTCCCTTCCCH
T ss_pred             CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCCH
Confidence            3348889999999999999999999999999998 888999999999999999999999999988 89999999999999


Q ss_pred             HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHH
Q 037666          161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHK  207 (375)
Q Consensus       161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~  207 (375)
                      ||+|++.+..       ++.++|  ++++++.+|++|+||+++|....+
T Consensus       181 L~~A~~~~~~-------~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~  222 (237)
T 3b7b_A          181 LHIAARENRY-------DCVVLFLSRDSDVTLKNKEGETPLQCASLNSQ  222 (237)
T ss_dssp             HHHHHHTTCH-------HHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCH
T ss_pred             HHHHHHhCCH-------hHHHHHHHcCCCCCccCCCCCCHHHHHHHHHH
Confidence            9999999987       777777  788899999999999999887654

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=4.1e-35  Score=257.45  Aligned_cols=195  Identities=20%  Similarity=0.180  Sum_probs=180.7

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      +.+.|.++|.+++...|.+|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.++.
T Consensus         6 ~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~   83 (223)
T 2f8y_A            6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT   83 (223)
T ss_dssp             CEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTS
T ss_pred             HHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            445677889999877689999999999999999999999999  899999999999999999999999999999999884


Q ss_pred             CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHH
Q 037666           83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETAL  161 (375)
Q Consensus        83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~L  161 (375)
                      ..+.+|.+|.||||+|+..|+.+++++|++.+. ++..|..|+||||+|+..++.+++++|+++ +.+++.+|.+|+|||
T Consensus        84 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L  162 (223)
T 2f8y_A           84 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPL  162 (223)
T ss_dssp             CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHH
T ss_pred             CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCcCHH
Confidence            458889999999999999999999999999998 888999999999999999999999999998 999999999999999


Q ss_pred             HHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHH
Q 037666          162 HVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHK  207 (375)
Q Consensus       162 h~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~  207 (375)
                      |+|++.++.       ++.++|  .+++++.+|..|.||+++|.+...
T Consensus       163 ~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~  203 (223)
T 2f8y_A          163 FLAAREGSY-------ETAKVLLDHFANRDITDHMDRLPRDIAQERMH  203 (223)
T ss_dssp             HHHHHHTCH-------HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             HHHHHcCCH-------HHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence            999999988       788877  778899999999999999887643

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=5.8e-34  Score=252.78  Aligned_cols=187  Identities=18%  Similarity=0.155  Sum_probs=173.8

Q ss_pred             hCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC----CCc
Q 037666            9 KYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK----DIA   84 (375)
Q Consensus         9 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~----~~~   84 (375)
                      +.|.+++.. |..|.||||+|+..|+.+++++|+++  +.+++.+|..|.||||+|+..|+.++++.|++.++    +. 
T Consensus        34 ~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-  109 (241)
T 1k1a_A           34 QGGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTA--GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-  109 (241)
T ss_dssp             HTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-
T ss_pred             hcCCCCCcc-cccCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-
Confidence            589999987 99999999999999999999999999  89999999999999999999999999999999987    54 


Q ss_pred             cccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCccc-chhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHH
Q 037666           85 MVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTD-DECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALH  162 (375)
Q Consensus        85 ~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d-~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh  162 (375)
                      +.+|.+|.||||+|+..|+.+++++|++.+. .+..+ ..|.||||+|+..|+.+++++|++. |.+++.+|.+|+||||
T Consensus       110 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~  188 (241)
T 1k1a_A          110 EARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH-GANVNAQMYSGSSALH  188 (241)
T ss_dssp             TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCBCTTSCBHHH
T ss_pred             cccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHH
Confidence            7789999999999999999999999999998 77777 7899999999999999999999998 9999999999999999


Q ss_pred             HHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHH
Q 037666          163 VLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHK  207 (375)
Q Consensus       163 ~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~  207 (375)
                      +|++.++.       ++.++|  .+++++.+|.+|+||+++|.+...
T Consensus       189 ~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~  228 (241)
T 1k1a_A          189 SASGRGLL-------PLVRTLVRSGADSSLKNCHNDTPLMVARSRRV  228 (241)
T ss_dssp             HHHHHTCH-------HHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHH
T ss_pred             HHHHcCCH-------HHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCc
Confidence            99999988       788877  788999999999999999876544

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=5.5e-34  Score=250.93  Aligned_cols=195  Identities=13%  Similarity=0.064  Sum_probs=172.6

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhc-hhcCCChHHHHHHHcCcHHHHHHHHccC-
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAK-KNKIGCTAFFYAAGSGMVEIVEEAMKGN-   80 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~-   80 (375)
                      +.+.|.+.+.+.+...|.+|+||||+|+..|+.+++++|+++....+++. .|..|+||||+|+..|+.++++.|++.+ 
T Consensus        17 ~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~   96 (228)
T 2dzn_A           17 KVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPL   96 (228)
T ss_dssp             HHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSS
T ss_pred             HHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence            44555555555554349999999999999999999999999932255666 8899999999999999999999999998 


Q ss_pred             -CCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCC
Q 037666           81 -KDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEE  158 (375)
Q Consensus        81 -~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~  158 (375)
                       ++. +.+|.+|.||||+|+..|+.+++++|++++. ++.+|..|+||||+|+..|+.++++.|++..+.+++.+|.+|+
T Consensus        97 ~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~  175 (228)
T 2dzn_A           97 KPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGW  175 (228)
T ss_dssp             CCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSC
T ss_pred             Cccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCC
Confidence             675 7889999999999999999999999999998 8889999999999999999999999999984499999999999


Q ss_pred             cHHHHHHHhcCCCCCCCccchhhcc---chhhHhhhcCCCCChhhhhHHH
Q 037666          159 TALHVLARKNLTSSNQNPCGVENVV---PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       159 T~Lh~A~~~~~~~~~~~~~~v~~~L---~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      ||||+|++.++.       ++.++|   .+++++.+|.+|+||+++|.+.
T Consensus       176 t~L~~A~~~~~~-------~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~  218 (228)
T 2dzn_A          176 TPLFHALAEGHG-------DAAVLLVEKYGAEYDLVDNKGAKAEDVALNE  218 (228)
T ss_dssp             CHHHHHHHTTCH-------HHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred             CHHHHHHHcCCH-------HHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence            999999999988       777776   4789999999999999998654

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=6.2e-34  Score=260.07  Aligned_cols=190  Identities=19%  Similarity=0.132  Sum_probs=173.8

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.+.|.++|.+++.. |.+|+||||+|+..|+.+++++|+++  +.+++.+|.+|+||||+|+..|+.+++++|++.++
T Consensus        73 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  149 (285)
T 3d9h_A           73 LSLRNLISQGWAVNII-TADHVSPLHEACLGGHLSCVKILLKH--GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA  149 (285)
T ss_dssp             HHHHHHHHTTCCSCEE-CTTCCCHHHHHHHTTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHCCCCCCCc-CCCCCCHHHHHHHCCcHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCC
Confidence            4677888899999987 99999999999999999999999999  89999999999999999999999999999999998


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      +. + .+.+|.||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+..|+.+++++|++. +.+++. |.+|+||
T Consensus       150 ~~-~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~-~~~g~t~  225 (285)
T 3d9h_A          150 SV-Q-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES-GADVNQ-GKGQDSP  225 (285)
T ss_dssp             CS-S-CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT-TCCTTC-CBTTBCH
T ss_pred             CC-C-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC-CCCCCC-CCCCCCH
Confidence            86 3 35569999999999999999999999998 888999999999999999999999999998 888884 8999999


Q ss_pred             HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      ||+|++.++.       ++.++|  .+++++.+|.+|+||+++|.+.
T Consensus       226 L~~A~~~~~~-------~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~  265 (285)
T 3d9h_A          226 LHAVVRTASE-------ELACLLMDFGADTQAKNAEGKRPVELVPPE  265 (285)
T ss_dssp             HHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred             HHHHHHcCCH-------HHHHHHHHCCCCCCCcCCCCCCHHHHhcCc
Confidence            9999999988       788877  7889999999999999999843

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=2.8e-34  Score=263.36  Aligned_cols=198  Identities=17%  Similarity=0.093  Sum_probs=176.6

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++++.|.++|+++|.. |.+|.||||+|+..|+.+++++|+++  +++++.+|..|+||||+|+..|+.+++++|++.++
T Consensus        54 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~  130 (299)
T 1s70_B           54 EEVLRLLERGADINYA-NVDGLTALHQACIDDNVDMVKFLVEN--GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGA  130 (299)
T ss_dssp             HHHHHHHHHCCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence            4567777889999987 99999999999999999999999998  89999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhccC----------------------------CcccchhhHHHHHHHhc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKG----------------------------SLTDDECIELLVKLIET  133 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~----------------------------~~~d~~g~t~Lh~A~~~  133 (375)
                      ++ +.+|.+|.||||+|+..|+.++++.++.....                            ...+..|.||||+|+..
T Consensus       131 ~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~  209 (299)
T 1s70_B          131 HV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK  209 (299)
T ss_dssp             CT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHH
T ss_pred             CC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHC
Confidence            86 88899999999999999999999887765431                            12456799999999999


Q ss_pred             CcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHHHHHH
Q 037666          134 DLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHKELKR  211 (375)
Q Consensus       134 ~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~~l~~  211 (375)
                      |+.++++.|++. |.++|.+|.+|+||||+|+..++.       ++.++|  .+++++.+|..|+||+++|.+...+.++
T Consensus       210 g~~~~v~~Ll~~-g~d~~~~d~~g~tpL~~A~~~~~~-------~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~  281 (299)
T 1s70_B          210 GYTEVLKLLIQA-RYDVNIKDYDGWTPLHAAAHWGKE-------EACRILVENLCDMEAVNKVGQTAFDVADEDILGYLE  281 (299)
T ss_dssp             TCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHH
T ss_pred             CcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHhcCCH-------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence            999999999987 999999999999999999999988       888887  7889999999999999999876544433

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.7e-34  Score=261.64  Aligned_cols=193  Identities=13%  Similarity=0.077  Sum_probs=150.7

Q ss_pred             HHHHHHhhCccc--------cccccCCCCCcHHHHHHHcCCH-HHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHH
Q 037666            2 VAKDIYDKYEDE--------IGQEITNLGNTALHVAAQANCI-DFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEI   72 (375)
Q Consensus         2 ~v~~lL~~~~~~--------~~~~~d~~g~tpLh~A~~~g~~-~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~i   72 (375)
                      +++++|++.+.+        ++.. |..|.||||.|+..++. ++++.|++.  |.++|.+|.+|+||||+|+..|+.++
T Consensus        25 ~~v~~LL~~~~~~~~~~~~~~~~~-~~~~~t~L~~a~~~~~~~~~v~~Ll~~--Gadvn~~d~~G~TpLh~A~~~g~~~~  101 (269)
T 4b93_B           25 EMVRYLLEWTEEDLEDAEDTVSAA-DPEFCHPLCQCPKCAPAQKRLAKVPAS--GLGVNVTSQDGSSPLHVAALHGRADL  101 (269)
T ss_dssp             HHHHHHHTCC-----------------------------------------C--CCCTTCCCTTSCCHHHHHHHTTCTTH
T ss_pred             HHHHHHHHCCCccccccccccccc-CccCCCHHHHHHHhCCHHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence            456777777664        3444 77899999999998875 478899998  89999999999999999999999999


Q ss_pred             HHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccc
Q 037666           73 VEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLAT  151 (375)
Q Consensus        73 v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~  151 (375)
                      +++|++.+++. +.++.+|.||+|.|+..++.+++++|++.++ ++.+|..|+||||+|+.+|+.++++.|++. |.++|
T Consensus       102 v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-gadvn  179 (269)
T 4b93_B          102 IPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQH-GASIN  179 (269)
T ss_dssp             HHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHT-TCCTT
T ss_pred             HHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCC
Confidence            99999999996 8899999999999999999999999999998 888999999999999999999999999998 99999


Q ss_pred             cccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          152 KRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       152 ~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      .+|.+|+||||+|+..|+.       +++++|  .|++++.+|++|+||+++|.++.
T Consensus       180 ~~~~~g~t~Lh~A~~~g~~-------~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~  229 (269)
T 4b93_B          180 ASNNKGNTALHEAVIEKHV-------FVVELLLLHGASVQVLNKRQRTAVDCAEQNS  229 (269)
T ss_dssp             CBCTTSCBHHHHHHHTTCH-------HHHHHHHHTTCCSCCCCTTSCCSGGGSCTTC
T ss_pred             ccccCCCcHHHHHHHcCCH-------HHHHHHHHCCCCCCCcCCCCCCHHHHHHhCC
Confidence            9999999999999999988       888887  78899999999999999997643

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=4.6e-33  Score=260.31  Aligned_cols=110  Identities=21%  Similarity=0.173  Sum_probs=86.8

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      .++++|.+.+.+++.. |..|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus        39 ~v~~ll~~~~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~  115 (351)
T 3utm_A           39 KLMALLTPLNVNCHAS-DGRKSTPLHLAAGYNRVRIVQLLLQH--GADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGA  115 (351)
T ss_dssp             HHHHHCCTTTTTCCCS-STTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHHHHHHhcCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCC
Confidence            3566777777777776 77888888888888888888888887  77788888888888888888888888888888877


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK  115 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~  115 (375)
                      ++ +.+|..|.||||+|+..|+.+++++|++++.
T Consensus       116 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  148 (351)
T 3utm_A          116 CV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGA  148 (351)
T ss_dssp             CT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            75 6777788888888888888888877777655

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.8e-34  Score=257.61  Aligned_cols=162  Identities=17%  Similarity=0.169  Sum_probs=149.1

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.++|.+.|+++|.. |.+|+||||+|+..|+.++|++|++.  +++++..+.+|.||+|+|+..++.++++.|++.++
T Consensus        67 ~~v~~Ll~~Gadvn~~-d~~G~TpLh~A~~~g~~~~v~~Ll~~--~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~  143 (269)
T 4b93_B           67 KRLAKVPASGLGVNVT-SQDGSSPLHVAALHGRADLIPLLLKH--GANAGARNADQAVPLHLACQQGHFQVVKCLLDSNA  143 (269)
T ss_dssp             --------CCCCTTCC-CTTSCCHHHHHHHTTCTTHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHCCCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHhc--CCCcCccCCCCCCccccccccChHHHHHHHHHCCC
Confidence            3567788899999998 99999999999999999999999999  89999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      ++ +.+|.+|+||||+|+..|+.+++++|++.++ ++.+|..|+||||+|+.+|+.++++.|+++ |.+++.+|.+|+||
T Consensus       144 ~~-n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~Tp  221 (269)
T 4b93_B          144 KP-NKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLH-GASVQVLNKRQRTA  221 (269)
T ss_dssp             CS-CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCS
T ss_pred             CC-CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCH
Confidence            96 8899999999999999999999999999999 889999999999999999999999999998 99999999999999


Q ss_pred             HHHHHHhc
Q 037666          161 LHVLARKN  168 (375)
Q Consensus       161 Lh~A~~~~  168 (375)
                      ||+|++++
T Consensus       222 L~~A~~~~  229 (269)
T 4b93_B          222 VDCAEQNS  229 (269)
T ss_dssp             GGGSCTTC
T ss_pred             HHHHHhCC
Confidence            99998766

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=3.5e-33  Score=253.44  Aligned_cols=180  Identities=21%  Similarity=0.176  Sum_probs=164.3

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhh---HhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCC
Q 037666           15 GQEITNLGNTALHVAAQANCIDFVKELLKMMSTED---LAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDG   91 (375)
Q Consensus        15 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~---~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g   91 (375)
                      +.. |.+|+||||+|+..|+.+++++|+++  +.+   ++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|
T Consensus         3 ~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g   78 (282)
T 1oy3_D            3 GYV-TEDGDTALHLAVIHQHEPFLDFLLGF--SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGG   78 (282)
T ss_dssp             CCC-CTTCCCHHHHHHHTTCHHHHHHHHHH--HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTS
T ss_pred             Ccc-CCCCCcHHHHHHHcCCHHHHHHHHhc--CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCC
Confidence            454 89999999999999999999999998  666   8899999999999999999999999999999996 8899999


Q ss_pred             ChHHHHHHHcCcHHHHHHHHHhcc------------------------------------------------CCcccchh
Q 037666           92 TLPIVRAAALGQRQTVVLLYEKTK------------------------------------------------GSLTDDEC  123 (375)
Q Consensus        92 ~tpLh~Aa~~g~~~iv~~Ll~~~~------------------------------------------------~~~~d~~g  123 (375)
                      .||||+|+..|+.+++++|++.++                                                .+.+|..|
T Consensus        79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  158 (282)
T 1oy3_D           79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG  158 (282)
T ss_dssp             CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred             CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence            999999999999999999998763                                                23467789


Q ss_pred             hHHHHHHHhcCcHHHHHHHHhcCCcccccccCC-CCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhh
Q 037666          124 IELLVKLIETDLYAVALRLLKDRPQLATKRDRN-EETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTA  200 (375)
Q Consensus       124 ~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~-G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~  200 (375)
                      +||||+|+..|+.+++++|+++ |.+++.+|.. |+||||+|++.++.       +++++|  .+++++.+|..|+||++
T Consensus       159 ~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~-------~~v~~Ll~~gad~~~~d~~g~tpL~  230 (282)
T 1oy3_D          159 HTPLHVAVIHKDAEMVRLLRDA-GADLNKPEPTCGRTPLHLAVEAQAA-------SVLELLLKAGADPTARMYGGRTPLG  230 (282)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             cCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcCHHHHHHHcCCH-------HHHHHHHHcCCCCcccccCCCCHHH
Confidence            9999999999999999999998 8999999865 99999999999988       888877  78899999999999999


Q ss_pred             hhHHHH
Q 037666          201 LFSEKH  206 (375)
Q Consensus       201 ~a~~~~  206 (375)
                      +|.+..
T Consensus       231 ~A~~~~  236 (282)
T 1oy3_D          231 SALLRP  236 (282)
T ss_dssp             HHHTSS
T ss_pred             HHHHcC
Confidence            987653

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=6.5e-33  Score=233.38  Aligned_cols=156  Identities=23%  Similarity=0.238  Sum_probs=144.4

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCc
Q 037666           24 TALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQ  103 (375)
Q Consensus        24 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~  103 (375)
                      ++|+.||+.|+.++|+.|+++  ++++|.+|.+|+||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~--Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~   82 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIEN--GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGH   82 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred             HHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCC
Confidence            479999999999999999999  8999999999999999999999999999999999996 8899999999999999999


Q ss_pred             HHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhc
Q 037666          104 RQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENV  182 (375)
Q Consensus       104 ~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~  182 (375)
                      .+++++|++.++ ++.+|.+|+||||+|+++|+.++++.|+++ |.+++.+|.+|+||||+|++.++.       +++++
T Consensus        83 ~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~g~~-------~iv~~  154 (169)
T 4gpm_A           83 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK-GADVNTSDSDGRTPLDLAREHGNE-------EVVKL  154 (169)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHH
T ss_pred             HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCH-------HHHHH
Confidence            999999999999 899999999999999999999999999998 999999999999999999999988       88888


Q ss_pred             c--chhhHhh
Q 037666          183 V--PKKLAEA  190 (375)
Q Consensus       183 L--~~~~~~~  190 (375)
                      |  +|++++.
T Consensus       155 Ll~~GA~ie~  164 (169)
T 4gpm_A          155 LEKQGGWLEH  164 (169)
T ss_dssp             HHTC------
T ss_pred             HHHCCCCcCC
Confidence            8  6666653

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=9.3e-33  Score=258.22  Aligned_cols=199  Identities=17%  Similarity=0.091  Sum_probs=181.1

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      +++++|.++|++++.. |.+|+||||+|+..|+.+++++|+++  +.+++..|..|.||||+|+..|+.+++++|++.++
T Consensus        72 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  148 (351)
T 3utm_A           72 RIVQLLLQHGADVHAK-DKGGLVPLHNACSYGHYEVTELLLKH--GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGA  148 (351)
T ss_dssp             HHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHcCCCCCcc-CCCCCcHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            5678889999999997 99999999999999999999999999  89999999999999999999999999999999988


Q ss_pred             CCccc------------------------------------------------------cCCCCChHHHHHHHc---CcH
Q 037666           82 DIAMV------------------------------------------------------PGGDGTLPIVRAAAL---GQR  104 (375)
Q Consensus        82 ~~~~~------------------------------------------------------~d~~g~tpLh~Aa~~---g~~  104 (375)
                      +. +.                                                      .+..|.||||+|+..   ++.
T Consensus       149 ~~-~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~  227 (351)
T 3utm_A          149 DP-TLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRK  227 (351)
T ss_dssp             CT-TCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHH
T ss_pred             CC-ccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHH
Confidence            74 33                                                      345678999999999   668


Q ss_pred             HHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          105 QTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       105 ~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      +++++|++.+. ++.+|.+|+||||+|+++|+.+++++|+++ |.++|.+|..|+||||+|++.++.       +++++|
T Consensus       228 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~t~L~~A~~~~~~-------~~v~~L  299 (351)
T 3utm_A          228 QVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKH-GAKMNALDSLGQTALHRAALAGHL-------QTCRLL  299 (351)
T ss_dssp             HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCH-------HHHHHH
T ss_pred             HHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcH-------HHHHHH
Confidence            99999999998 888999999999999999999999999988 999999999999999999999988       888887


Q ss_pred             --chhhHhhhcCCCCChhhhhHHHHHHHHHh
Q 037666          184 --PKKLAEAINTGGLTPTALFSEKHKELKRK  212 (375)
Q Consensus       184 --~~~~~~~~n~~g~tpl~~a~~~~~~l~~~  212 (375)
                        .+++++.+|..|+||++++.+...+.+.+
T Consensus       300 l~~gad~~~~~~~g~tal~~a~~~~~~~l~~  330 (351)
T 3utm_A          300 LSYGSDPSIISLQGFTAAQMGNEAVQQILSE  330 (351)
T ss_dssp             HHTTCCTTCCCTTSCCHHHHSCHHHHHHHHH
T ss_pred             HHcCCCCCCcCCCCCChhhhhhHHHHHHHHh
Confidence              78899999999999999997766655444

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=1.7e-32  Score=248.87  Aligned_cols=199  Identities=21%  Similarity=0.160  Sum_probs=176.5

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.+.|.++|.+++...+..|+||||+|+..|+.+++++|+++  +.+++.+|.+|.||||+|+..|+.+++++|++.++
T Consensus        19 ~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~   96 (285)
T 1wdy_A           19 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGA   96 (285)
T ss_dssp             HHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            4667788899999887688899999999999999999999999  88999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcc----------cchhhHHHHHHHhcCcHHHHHHHHhcCCccc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLT----------DDECIELLVKLIETDLYAVALRLLKDRPQLA  150 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~----------d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~  150 (375)
                      ++ +.+|.+|.||||+|+..|+.+++++|++.+. .+..          +..|.||||.|+..|+.+++++|+++.+.++
T Consensus        97 ~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~  175 (285)
T 1wdy_A           97 DV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV  175 (285)
T ss_dssp             CT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCT
T ss_pred             CC-CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCC
Confidence            86 8889999999999999999999999999988 6554          7789999999999999999999999889999


Q ss_pred             ccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          151 TKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       151 ~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      +.+|..|+||||+|+..+.....   .++.++|  .+++++.+|..|.||+++|.+..
T Consensus       176 ~~~~~~g~t~l~~a~~~~~~~~~---~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  230 (285)
T 1wdy_A          176 NACDNMGRNALIHALLSSDDSDV---EAITHLLLDHGADVNVRGERGKTPLILAVEKK  230 (285)
T ss_dssp             TCCCTTSCCHHHHHHHCSCTTTH---HHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTT
T ss_pred             CccCCCCCCHHHHHHHccccchH---HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence            99999999999999998863100   0566665  67888899999999999987653

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=6.7e-33  Score=262.87  Aligned_cols=191  Identities=18%  Similarity=0.108  Sum_probs=176.4

Q ss_pred             HHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccC---C
Q 037666            5 DIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGN---K   81 (375)
Q Consensus         5 ~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~---~   81 (375)
                      +.|.++|+++|.. |.+|.||||+|+..|+.++|++|+++  +++++.+|..|.||||+|+..|+.+++++|++.+   .
T Consensus       150 ~~ll~~ga~vn~~-d~~g~TpL~~A~~~g~~~iv~~Ll~~--ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~  226 (373)
T 2fo1_E          150 KECIAAGADVNAM-DCDENTPLMLAVLARRRRLVAYLMKA--GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKG  226 (373)
T ss_dssp             HHHHHTCCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred             HHHHhcCCCCcCC-CCCCCCHHHHHHHcChHHHHHHHHHC--CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCcccc
Confidence            4456899999997 99999999999999999999999999  8999999999999999999999999999999987   5


Q ss_pred             CCccccCCCCChHHHHHHHcC---cHHHHHHHHHhcc-CCc--------ccchhhHHHHHHHhcCcHHHHHHHHhcCCcc
Q 037666           82 DIAMVPGGDGTLPIVRAAALG---QRQTVVLLYEKTK-GSL--------TDDECIELLVKLIETDLYAVALRLLKDRPQL  149 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g---~~~iv~~Ll~~~~-~~~--------~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~  149 (375)
                      ++ +..|.+|.||||+|+..|   +.+++++|++.+. ++.        .|..|+||||+|+..|+.+++++|+++.+.+
T Consensus       227 ~~-~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~  305 (373)
T 2fo1_E          227 DI-EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN  305 (373)
T ss_dssp             TT-SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC
T ss_pred             Ch-hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC
Confidence            65 788999999999999998   8999999999998 554        5678999999999999999999999986799


Q ss_pred             cccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          150 ATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       150 ~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ++.+|.+|+||||+|+..|+.       +++++|  .+++++.+|.+|+||+++|.+..
T Consensus       306 ~n~~d~~g~TpL~~A~~~g~~-------~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g  357 (373)
T 2fo1_E          306 KDKQDEDGKTPIMLAAQEGRI-------EVVMYLIQQGASVEAVDATDHTARQLAQANN  357 (373)
T ss_dssp             TTCCCTTCCCHHHHHHHHTCH-------HHHHHHHHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred             ccCcCCCCCCHHHHHHHcCCH-------HHHHHHHHcCCCccCCCCCCCCHHHHHHHcC
Confidence            999999999999999999988       888887  78899999999999999998754

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=2.1e-32  Score=242.39  Aligned_cols=182  Identities=20%  Similarity=0.199  Sum_probs=170.2

Q ss_pred             ccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCC
Q 037666           13 EIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGT   92 (375)
Q Consensus        13 ~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~   92 (375)
                      +++.+ |.+|+||||+|+..|+.+++++|+++  +.+++..|.+|.||||+|+..|+.+++++|++.+.+. +.+|..|.
T Consensus         3 ~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~   78 (237)
T 3b7b_A            3 NFKME-HQNKRSPLHAAAEAGHVDICHMLVQA--GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGS   78 (237)
T ss_dssp             CCCCS-SCCSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSC
T ss_pred             Ccccc-cCCCCCHHHHHHHcCcHHHHHHHHHc--CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCC
Confidence            56666 89999999999999999999999999  8999999999999999999999999999999999986 88899999


Q ss_pred             hHHHHHHHcCcHHHHHHHHHhcc--CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCC
Q 037666           93 LPIVRAAALGQRQTVVLLYEKTK--GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLT  170 (375)
Q Consensus        93 tpLh~Aa~~g~~~iv~~Ll~~~~--~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~  170 (375)
                      ||||+|+..|+.+++++|++.++  .+..|..|.||||.|+..++.+++++|++. |.+++.+|.+|+||||+|+..++.
T Consensus        79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~  157 (237)
T 3b7b_A           79 TCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK-GSDINIRDNEENICLHWAAFSGCV  157 (237)
T ss_dssp             CHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCH
T ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHCCCH
Confidence            99999999999999999999985  777899999999999999999999999998 999999999999999999999987


Q ss_pred             CCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          171 SSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       171 ~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                             ++.++|  .+++++.+|..|.||+++|.+..
T Consensus       158 -------~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  188 (237)
T 3b7b_A          158 -------DIAEILLAAKCDLHAVNIHGDSPLHIAAREN  188 (237)
T ss_dssp             -------HHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             -------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC
Confidence                   788877  67889999999999999987653

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=3.7e-33  Score=250.29  Aligned_cols=182  Identities=15%  Similarity=0.143  Sum_probs=136.4

Q ss_pred             ccccccCCCCCcHHHHHHHcC-------------CHHHHHHHHHcCChhhHh-chhcCCChHHHHHHHcCcHHHHHHHHc
Q 037666           13 EIGQEITNLGNTALHVAAQAN-------------CIDFVKELLKMMSTEDLA-KKNKIGCTAFFYAAGSGMVEIVEEAMK   78 (375)
Q Consensus        13 ~~~~~~d~~g~tpLh~A~~~g-------------~~~~v~~Ll~~~~~~~~~-~~d~~g~tpLh~Aa~~g~~~iv~~Ll~   78 (375)
                      |+|.+ |.+|+||||+|+..|             +.+++++|+++  +.+++ ..|.+|+||||+|+..|+.+++++|++
T Consensus         2 dvn~~-d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~--g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~   78 (253)
T 1yyh_A            2 DVNVR-GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ--GASLHNQTDRTGETALHLAARYSRSDAAKRLLE   78 (253)
T ss_dssp             -----------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             CCCCC-CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc--cCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence            67887 999999999999987             89999999999  67764 468999999999999999999999999


Q ss_pred             cCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc--CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCC
Q 037666           79 GNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK--GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRN  156 (375)
Q Consensus        79 ~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~--~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~  156 (375)
                      .++++ +.+|.+|.||||+|+..|+.+++++|++.++  .+.+|.+|.||||+|+..++.++++.|++. +.+++.+|.+
T Consensus        79 ~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~  156 (253)
T 1yyh_A           79 ASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDL  156 (253)
T ss_dssp             TTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT-TCCTTCBCTT
T ss_pred             cCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCCCcCCC
Confidence            99996 8899999999999999999999999999987  677899999999999999999999999998 9999999999


Q ss_pred             CCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          157 EETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       157 G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      |+||||+|+..++.       ++.++|  .+++++.+|..|.||+++|.+..
T Consensus       157 g~t~L~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~  201 (253)
T 1yyh_A          157 GKSALHWAAAVNNV-------DAAVVLLKNGANKDMQNNREETPLFLAAREG  201 (253)
T ss_dssp             SCBHHHHHHHHTCH-------HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             CCCHHHHHHHcCCH-------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHCC
Confidence            99999999999987       788877  77899999999999999997654

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=3.2e-32  Score=246.97  Aligned_cols=193  Identities=19%  Similarity=0.182  Sum_probs=178.1

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.++|.++|++++.. |.+|.||||+|+..|+.+++++|+++  +.+++.+|..|.||||+|+..|+.+++++|++.+.
T Consensus        53 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~  129 (285)
T 1wdy_A           53 DIVELLLRHGADPVLR-KKNGATPFLLAAIAGSVKLLKLFLSK--GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGA  129 (285)
T ss_dssp             HHHHHHHHTTCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCC
Confidence            5778899999999987 99999999999999999999999999  89999999999999999999999999999999998


Q ss_pred             CCcccc----------CCCCChHHHHHHHcCcHHHHHHHHHh-cc-CCcccchhhHHHHHHHhcCc----HHHHHHHHhc
Q 037666           82 DIAMVP----------GGDGTLPIVRAAALGQRQTVVLLYEK-TK-GSLTDDECIELLVKLIETDL----YAVALRLLKD  145 (375)
Q Consensus        82 ~~~~~~----------d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~-~~~~d~~g~t~Lh~A~~~~~----~~~v~~LL~~  145 (375)
                      +. +.+          +..|.||||.|+..|+.+++++|++. +. ++..|..|+||||.|+..++    .++++.|++.
T Consensus       130 ~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~  208 (285)
T 1wdy_A          130 NV-NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH  208 (285)
T ss_dssp             CT-TCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT
T ss_pred             Cc-ccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc
Confidence            86 444          78899999999999999999999998 65 78889999999999999999    8999999988


Q ss_pred             CCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc---chhhHhhhcCCCCChhhhhHHHH
Q 037666          146 RPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV---PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       146 ~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L---~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                       |.+++.+|.+|+||||+|++.++.       ++.++|   .+.+++.+|.+|+||+++|.+..
T Consensus       209 -g~~~~~~~~~g~t~L~~A~~~~~~-------~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~  264 (285)
T 1wdy_A          209 -GADVNVRGERGKTPLILAVEKKHL-------GLVQRLLEQEHIEINDTDSDGKTALLLAVELK  264 (285)
T ss_dssp             -TCCSSCCCTTSCCHHHHHHHTTCH-------HHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred             -CCCCCCcCCCCCcHHHHHHHcCCH-------HHHHHHHhccCCCccccCCCCCcHHHHHHHcC
Confidence             999999999999999999999987       777776   46889999999999999998754

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=100.00  E-value=1.4e-32  Score=242.74  Aligned_cols=177  Identities=19%  Similarity=0.110  Sum_probs=156.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCc----cccCCCCChHHH
Q 037666           21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIA----MVPGGDGTLPIV   96 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~----~~~d~~g~tpLh   96 (375)
                      .|+||||+|+..|+.+++++|++.. +.+++.+|.+|+||||+|+..|+.+++++|++.+++..    +.+|.+|.||||
T Consensus         2 ~g~t~L~~A~~~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~   80 (232)
T 2rfa_A            2 IWESPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH   80 (232)
T ss_dssp             CTTCHHHHHHHTTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence            4899999999999999999999975 78899999999999999999999999999999988742    456778999999


Q ss_pred             HHHHcCcHHHHHHHHHhcc-CCcccc-------------hhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHH
Q 037666           97 RAAALGQRQTVVLLYEKTK-GSLTDD-------------ECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALH  162 (375)
Q Consensus        97 ~Aa~~g~~~iv~~Ll~~~~-~~~~d~-------------~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh  162 (375)
                      +|+..|+.+++++|++.++ .+.++.             +|+||||+|+..|+.+++++|+++ |.+++.+|.+|+||||
T Consensus        81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~  159 (232)
T 2rfa_A           81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-GADIRAQDSLGNTVLH  159 (232)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred             HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHH
Confidence            9999999999999999988 666544             799999999999999999999998 9999999999999999


Q ss_pred             HHHHhcCCCCCCCccchh----hcc--chhhH------hhhcCCCCChhhhhHHHH
Q 037666          163 VLARKNLTSSNQNPCGVE----NVV--PKKLA------EAINTGGLTPTALFSEKH  206 (375)
Q Consensus       163 ~A~~~~~~~~~~~~~~v~----~~L--~~~~~------~~~n~~g~tpl~~a~~~~  206 (375)
                      +|+..++.       ++.    ++|  .+++.      +.+|..|+||+++|.+..
T Consensus       160 ~A~~~~~~-------~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g  208 (232)
T 2rfa_A          160 ILILQPNK-------TFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG  208 (232)
T ss_dssp             HHHTCSCH-------HHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred             HHHHcCCh-------HHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence            99999876       555    555  44544      588999999999998764

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=1.2e-32  Score=251.45  Aligned_cols=187  Identities=14%  Similarity=0.040  Sum_probs=169.7

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      +++++|.+.  +++.+ |.+|+||||+|+..|+.+++++|+++  +.+++..|  |+||||+|+..|+.+++++|++.++
T Consensus        14 ~v~~lL~~~--~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga   86 (285)
T 3kea_A           14 QLKSFLSSK--DTFKA-DVHGHSASYYAIADNNVRLVCTLLNA--GALKNLLE--NEFPLHQAATLEDTKIVKILLFSGL   86 (285)
T ss_dssp             HHHHHHHST--TTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTC
T ss_pred             HHHHHHHhC--CCCcc-CCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCC
Confidence            578888876  46776 99999999999999999999999999  88888874  9999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchh-hHHHHHHHhcCcHHHHHHHHhcCCcccccccC-CCC
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDEC-IELLVKLIETDLYAVALRLLKDRPQLATKRDR-NEE  158 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g-~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~-~G~  158 (375)
                      ++ +.+|..|.||||+|+..|+.+++++|+++++ ++.+|..| +||||+|+..|+.+++++|+++ +.+.  .|. +|+
T Consensus        87 ~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-g~~~--~~~~~g~  162 (285)
T 3kea_A           87 DD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPST--FDLAILL  162 (285)
T ss_dssp             CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTT-SCTT--CCCSTHH
T ss_pred             CC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCcc--ccccCCc
Confidence            96 8899999999999999999999999999998 88889998 8999999999999999999998 5444  333 899


Q ss_pred             cHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCCh-hhhhHHHH
Q 037666          159 TALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTP-TALFSEKH  206 (375)
Q Consensus       159 T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tp-l~~a~~~~  206 (375)
                      ||||+|+..++.       ++.++|  .+++++.+|..|+|| +++|.+..
T Consensus       163 t~L~~A~~~g~~-------~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~  206 (285)
T 3kea_A          163 SCIHITIKNGHV-------DMMILLLDYMTSTNTNNSLLFIPDIKLAIDNK  206 (285)
T ss_dssp             HHHHHHHHTTCH-------HHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHT
T ss_pred             cHHHHHHHcChH-------HHHHHHHHcCCCCCcccCCCCChHHHHHHHcC
Confidence            999999999988       888877  789999999999998 99988654

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.98  E-value=1.3e-32  Score=259.61  Aligned_cols=191  Identities=15%  Similarity=0.077  Sum_probs=171.0

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHcc--
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG--   79 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~--   79 (375)
                      +++++|.++|++++.. |..|+||||+|+..|+.++|++|+++  +.+  ..+.+|.||||+|+..|+.+++++|++.  
T Consensus        34 ~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~  108 (364)
T 3ljn_A           34 DEVRRLIETGVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASV--GEV--HSLWHGQKPIHLAVMANKTDLVVALVEGAK  108 (364)
T ss_dssp             HHHHHHHHTTCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHH--CCC--CCCBTTBCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHC--CCC--ccccCCCCHHHHHHHcCCHHHHHHHHHhcc
Confidence            4677888899999987 99999999999999999999999999  553  3345799999999999999999999998  


Q ss_pred             --CCCCccc-----------------cCCCCChHHHHHHHcC--cHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHH
Q 037666           80 --NKDIAMV-----------------PGGDGTLPIVRAAALG--QRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYA  137 (375)
Q Consensus        80 --~~~~~~~-----------------~d~~g~tpLh~Aa~~g--~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~  137 (375)
                        +.+. +.                 +|.+|.||||+|+..|  +.+++++|++.+. ++.+|..|+||||+|+..|+.+
T Consensus       109 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~  187 (364)
T 3ljn_A          109 ERGQMP-ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNRE  187 (364)
T ss_dssp             HHTCCH-HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             ccCCCH-HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHH
Confidence              6553 44                 7889999999999999  9999999999998 8889999999999999999999


Q ss_pred             HHHHHHhcCCcc-----cccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          138 VALRLLKDRPQL-----ATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       138 ~v~~LL~~~~~~-----~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ++++|++. +.+     +|.+|.+|+||||+|+..++.       +++++|  .+++++.+|.+|.||+++|.+..
T Consensus       188 ~v~~Ll~~-g~~~~~~~~~~~~~~g~t~L~~A~~~g~~-------~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g  255 (364)
T 3ljn_A          188 ALDLMMDT-VPSKSSLRLDYANKQGNSHLHWAILINWE-------DVAMRFVEMGIDVNMEDNEHTVPLYLSVRAA  255 (364)
T ss_dssp             HHHHHHHH-CSCSSSCCTTCCCTTCCCTTHHHHTTTCH-------HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTC
T ss_pred             HHHHHHhc-ccccccccccccCCCCCcHHHHHHHcCCH-------HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC
Confidence            99999998 666     999999999999999999988       888877  78899999999999999998764

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.98  E-value=2.6e-32  Score=263.82  Aligned_cols=190  Identities=22%  Similarity=0.215  Sum_probs=108.9

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      +.++|.++|++++.. |..|.||||+|+..|+.+++++|+++  +.+++..+.+|.||||+|+..|+.++++.|++.+.+
T Consensus       161 ~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~  237 (437)
T 1n11_A          161 VAELLLERDAHPNAA-GKNGLTPLHVAVHHNNLDIVKLLLPR--GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS  237 (437)
T ss_dssp             HHHHHHHTTCCTTCC-CSSCCCHHHHHHHTTCHHHHHHHGGG--TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             HHHHHHhCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            455555666666654 55666666666666666666666665  455555555555666666666666666655555555


Q ss_pred             CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHH
Q 037666           83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETAL  161 (375)
Q Consensus        83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~L  161 (375)
                      . +.+|..|.||||+|+..|+.+++++|+++++ .+..|..|+||||+|++.|+.+++++|+++ +.+++.+|..|+|||
T Consensus       238 ~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L  315 (437)
T 1n11_A          238 A-NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH-GVMVDATTRMGYTPL  315 (437)
T ss_dssp             T-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCSSCCCHH
T ss_pred             C-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CccCCCCCCCCCCHH
Confidence            3 4555555555555555555555555555555 455555555555555555555555555555 555555555555555


Q ss_pred             HHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHH
Q 037666          162 HVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSE  204 (375)
Q Consensus       162 h~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~  204 (375)
                      |+|+..++.       +++++|  .+++++.+|..|.||+++|.+
T Consensus       316 ~~A~~~g~~-------~~v~~Ll~~gad~n~~~~~g~t~L~~A~~  353 (437)
T 1n11_A          316 HVASHYGNI-------KLVKFLLQHQADVNAKTKLGYSPLHQAAQ  353 (437)
T ss_dssp             HHHHHSSCS-------HHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             HHHHHcCcH-------HHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence            555555554       444444  445555555555555555544

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.98  E-value=6.3e-32  Score=233.18  Aligned_cols=184  Identities=17%  Similarity=0.089  Sum_probs=162.3

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      +..+.||||.|+..|+.+.++.|++.. +.+++..|.+|+||||+|++.|+.+++++|++.++++ +.+|..|.||||+|
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A   79 (201)
T 3hra_A            2 KTYEVGALLEAANQRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYA   79 (201)
T ss_dssp             -CCCTTHHHHHHHTTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred             CcccccHHHHHHHhccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence            457899999999999999999999985 5589999999999999999999999999999999996 88999999999999


Q ss_pred             HHcCcHHHHHHHHHhcc--CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCc
Q 037666           99 AALGQRQTVVLLYEKTK--GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNP  176 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~--~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~  176 (375)
                      +..|+.+++++|++.+.  .+..|..|.||||.|+..++.+++++|+++.+.+++.+|.+|+||||+|+..+.....  +
T Consensus        80 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~--~  157 (201)
T 3hra_A           80 GAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL--Y  157 (201)
T ss_dssp             HHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHH--H
T ss_pred             HHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhh--H
Confidence            99999999999996665  7778999999999999999999999999995599999999999999999988761000  0


Q ss_pred             cchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          177 CGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       177 ~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      .++.++|  .+++++.+|.+|+||+++|.+..
T Consensus       158 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~  189 (201)
T 3hra_A          158 QDIVKLLMENGADQSIKDNSGRTAMDYANQKG  189 (201)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC
Confidence            1677776  77899999999999999988764

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.98  E-value=8.1e-33  Score=257.65  Aligned_cols=186  Identities=14%  Similarity=0.152  Sum_probs=158.2

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCc---HHHHHHHHc
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGM---VEIVEEAMK   78 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~---~~iv~~Ll~   78 (375)
                      +++++|.+.|+++|...|.+|+||||+|+..|+.++|++|+++  +++++.+|.+|+||||+|+..|+   .++++.|++
T Consensus       111 ~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~--Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~  188 (327)
T 1sw6_A          111 EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKH--GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLD  188 (327)
T ss_dssp             HHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHH
T ss_pred             HHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHH
Confidence            5778899999999993399999999999999999999999999  89999999999999999999999   688888888


Q ss_pred             cCCCCccccCCCCChHHHHHHH----cCcHHHHHHHHHh--------------------cc-CCcccchhhHHHHHHHhc
Q 037666           79 GNKDIAMVPGGDGTLPIVRAAA----LGQRQTVVLLYEK--------------------TK-GSLTDDECIELLVKLIET  133 (375)
Q Consensus        79 ~~~~~~~~~d~~g~tpLh~Aa~----~g~~~iv~~Ll~~--------------------~~-~~~~d~~g~t~Lh~A~~~  133 (375)
                      .+....+.+|.+|+||||+|+.    .|+.+++++|++.                    +. ++.+|..|.||||.|+. 
T Consensus       189 ~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~-  267 (327)
T 1sw6_A          189 YLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD-  267 (327)
T ss_dssp             HHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS-
T ss_pred             hhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH-
Confidence            7633248899999999999999    8999999999987                    44 67788999999999996 


Q ss_pred             CcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          134 DLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       134 ~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                           +++|++.   ++|.+|.+|+||||+|++.++.       +++++|  .+++++.+|.+|+||+++|++.
T Consensus       268 -----~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~-------~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~  326 (327)
T 1sw6_A          268 -----LKWIIAN---MLNAQDSNGDTCLNIAARLGNI-------SIVDALLDYGADPFIANKSGLRPVDFGAGL  326 (327)
T ss_dssp             -----HHHHHHH---TTTCCCTTSCCHHHHHHHHCCH-------HHHHHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred             -----HHHHHHh---CCCCCCCCCCCHHHHHHHcCCH-------HHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence                 7788877   5899999999999999999988       888887  7899999999999999998653

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.97  E-value=1.2e-31  Score=237.77  Aligned_cols=181  Identities=14%  Similarity=0.108  Sum_probs=163.4

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHc---CChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCC
Q 037666           15 GQEITNLGNTALHVAAQANCIDFVKELLKM---MSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDG   91 (375)
Q Consensus        15 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~---~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g   91 (375)
                      +.+ |.+|+||||+|+..|+.+++++|++.   . +.+++.+|..|+||||+|+..|+.+++++|++.+.+. +.+|.+|
T Consensus         3 ~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g   79 (241)
T 1k1a_A            3 TRA-DEDGDTPLHIAVVQGNLPAVHRLVNLFQQG-GRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHG   79 (241)
T ss_dssp             -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred             ccc-CCCCCcHHHHHHHcCCHHHHHHHHHHHHhc-CCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCC
Confidence            444 89999999999999999999999982   2 7789999999999999999999999999999999986 8889999


Q ss_pred             ChHHHHHHHcCcHHHHHHHHHhcc-----CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCccccccc-CCCCcHHHHHH
Q 037666           92 TLPIVRAAALGQRQTVVLLYEKTK-----GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRD-RNEETALHVLA  165 (375)
Q Consensus        92 ~tpLh~Aa~~g~~~iv~~Ll~~~~-----~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d-~~G~T~Lh~A~  165 (375)
                      .||||+|+..|+.+++++|++.++     .+..|..|.||||.|+..++.+++++|++. +.+++.+| ..|+||||+|+
T Consensus        80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~g~t~L~~A~  158 (241)
T 1k1a_A           80 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER-GADIDAVDIKSGRSPLIHAV  158 (241)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc-CCCcccccccCCCcHHHHHH
Confidence            999999999999999999999985     445788999999999999999999999998 88999988 89999999999


Q ss_pred             HhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          166 RKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       166 ~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      +.++.       ++.++|  .+++++.+|.+|.||+++|....
T Consensus       159 ~~~~~-------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  194 (241)
T 1k1a_A          159 ENNSL-------SMVQLLLQHGANVNAQMYSGSSALHSASGRG  194 (241)
T ss_dssp             HTTCH-------HHHHHHHHTTCCTTCBCTTSCBHHHHHHHHT
T ss_pred             HcCCH-------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            99987       788877  67889999999999999987653

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.97  E-value=1.6e-31  Score=236.04  Aligned_cols=170  Identities=20%  Similarity=0.140  Sum_probs=151.6

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhH-----hchhcCCChHHHHHHHcCcHHHHHHHH
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDL-----AKKNKIGCTAFFYAAGSGMVEIVEEAM   77 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~-----~~~d~~g~tpLh~Aa~~g~~~iv~~Ll   77 (375)
                      ++.+|...|.+++.. |.+|+||||+|+..|+.+++++|+++  +.++     +..|.+|+||||+|+..|+.+++++|+
T Consensus        19 v~~Ll~~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll   95 (232)
T 2rfa_A           19 LSKLLKFEGCEVHQR-GAMGETALHIAALYDNLEAAMVLMEA--APELVFEPMTSELYEGQTALHIAVINQNVNLVRALL   95 (232)
T ss_dssp             HHHHHTTTCSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHH--CGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHhcCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHc--CchhccccccccCCCCcCHHHHHHHcCCHHHHHHHH
Confidence            344444459999998 99999999999999999999999999  6665     667889999999999999999999999


Q ss_pred             ccCCCCccccCC-------------CCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHH----
Q 037666           78 KGNKDIAMVPGG-------------DGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVA----  139 (375)
Q Consensus        78 ~~~~~~~~~~d~-------------~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v----  139 (375)
                      +.+++. +.++.             +|.||||+|+..|+.+++++|+++++ ++.+|.+|+||||+|+.+++.+++    
T Consensus        96 ~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~  174 (232)
T 2rfa_A           96 ARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMY  174 (232)
T ss_dssp             HTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHH
T ss_pred             hCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Confidence            999886 55544             79999999999999999999999998 888999999999999999999988    


Q ss_pred             HHHHhcCCccc------ccccCCCCcHHHHHHHhcCCCCCCCccchhhccc
Q 037666          140 LRLLKDRPQLA------TKRDRNEETALHVLARKNLTSSNQNPCGVENVVP  184 (375)
Q Consensus       140 ~~LL~~~~~~~------~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~  184 (375)
                      +.|++. +.+.      +.+|.+|+||||+|++.++.       ++.++|.
T Consensus       175 ~~Ll~~-g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~-------~~v~~Ll  217 (232)
T 2rfa_A          175 NLLLSY-DGGDHLKSLELVPNNQGLTPFKLAGVEGNI-------VMFQHLM  217 (232)
T ss_dssp             HHHHHT-TCSCSSCCGGGCCCTTSCCHHHHHHHHTCH-------HHHHHHH
T ss_pred             HHHHhc-CCchhhhhhhccCCCCCCCHHHHHHHcCCH-------HHHHHHH
Confidence            888877 6655      68999999999999999988       8888873

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.97  E-value=1.3e-31  Score=231.13  Aligned_cols=171  Identities=21%  Similarity=0.284  Sum_probs=156.9

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      .++++|.+.+.+++.. |.+|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.+.
T Consensus        20 ~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~   96 (201)
T 3hra_A           20 KVKEILQDTTYQVDEV-DTEGNTPLNIAVHNNDIEIAKALIDR--GADINLQNSISDSPYLYAGAQGRTEILAYMLKHAT   96 (201)
T ss_dssp             HHHHHHTCTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred             HHHHHHHcCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence            4667777777799987 99999999999999999999999999  89999999999999999999999999999996554


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhc-c-CCcccchhhHHHHHHHhcCc-----HHHHHHHHhcCCccccccc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKT-K-GSLTDDECIELLVKLIETDL-----YAVALRLLKDRPQLATKRD  154 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~-~-~~~~d~~g~t~Lh~A~~~~~-----~~~v~~LL~~~~~~~~~~d  154 (375)
                      ...+.+|..|.||||+|+..|+.+++++|++.+ . .+.+|..|+||||+|+..++     .+++++|+++ |.+++.+|
T Consensus        97 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~-ga~~~~~~  175 (201)
T 3hra_A           97 PDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN-GADQSIKD  175 (201)
T ss_dssp             CCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT-TCCTTCCC
T ss_pred             cccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC-CCCCCccC
Confidence            334889999999999999999999999999999 4 78899999999999999887     9999999998 99999999


Q ss_pred             CCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          155 RNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       155 ~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      .+|+||||+|++.++.       ++.++|
T Consensus       176 ~~g~t~l~~A~~~~~~-------~~~~~L  197 (201)
T 3hra_A          176 NSGRTAMDYANQKGYT-------EISKIL  197 (201)
T ss_dssp             TTSCCHHHHHHHHTCH-------HHHHHH
T ss_pred             CCCCCHHHHHHHcCCH-------hHHHHH
Confidence            9999999999999988       777766

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.97  E-value=2e-31  Score=234.53  Aligned_cols=176  Identities=18%  Similarity=0.184  Sum_probs=159.0

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccC--CCCccccCCCCChHHHHHH
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGN--KDIAMVPGGDGTLPIVRAA   99 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~--~~~~~~~d~~g~tpLh~Aa   99 (375)
                      |+||||+|+..|+.+++++|++.. +...+..|.+|+||||+|+..|+.+++++|++.+  ++....+|..|.||||+|+
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~   80 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSK-PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC   80 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHC-GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcC-ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence            789999999999999999999994 4445568999999999999999999999999999  5653338899999999999


Q ss_pred             HcCcHHHHHHHHHhc--c-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCc
Q 037666          100 ALGQRQTVVLLYEKT--K-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNP  176 (375)
Q Consensus       100 ~~g~~~iv~~Ll~~~--~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~  176 (375)
                      ..|+.+++++|++.+  + .+..|.+|.||||.|+..++.+++++|+++ |.+++.+|.+|+||||+|++.++.      
T Consensus        81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~------  153 (228)
T 2dzn_A           81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSL------  153 (228)
T ss_dssp             HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCH------
T ss_pred             HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCH------
Confidence            999999999999998  4 677899999999999999999999999998 999999999999999999999987      


Q ss_pred             cchhhcc--ch-hhHhhhcCCCCChhhhhHHHH
Q 037666          177 CGVENVV--PK-KLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       177 ~~v~~~L--~~-~~~~~~n~~g~tpl~~a~~~~  206 (375)
                       ++.++|  .+ .+++.+|.+|.||+++|.+..
T Consensus       154 -~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~  185 (228)
T 2dzn_A          154 -KLIELLCGLGKSAVNWQDKQGWTPLFHALAEG  185 (228)
T ss_dssp             -HHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTT
T ss_pred             -HHHHHHHhcCcccccCcCCCCCCHHHHHHHcC
Confidence             788877  55 788999999999999987654

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.97  E-value=2.3e-31  Score=257.19  Aligned_cols=191  Identities=20%  Similarity=0.158  Sum_probs=125.3

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      +++.|.+++.+.+.. +..|.||||+|+..|+.+++++|+++  +.+++..|..|.||||+|+..|+.+++++|++.+.+
T Consensus       128 ~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  204 (437)
T 1n11_A          128 TVLALLEKEASQACM-TKKGFTPLHVAAKYGKVRVAELLLER--DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS  204 (437)
T ss_dssp             HHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC
T ss_pred             HHHHHHhCCCCCcCC-CCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence            445555566666554 66666666666666666666666666  566666666666666666666666666666666666


Q ss_pred             CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHH
Q 037666           83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETAL  161 (375)
Q Consensus        83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~L  161 (375)
                      . +.++.+|.||||+|+..|+.+++++|++.+. .+..+..|.||||.|+..|+.+++++|+++ +.+++.+|..|+|||
T Consensus       205 ~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L  282 (437)
T 1n11_A          205 P-HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK-QANGNLGNKSGLTPL  282 (437)
T ss_dssp             S-CCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTCCCHH
T ss_pred             C-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhc-CCCCCCCCCCCCCHH
Confidence            4 5566666666666666666666666666666 555666666666666666666666666665 666666666666666


Q ss_pred             HHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          162 HVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       162 h~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      |+|++.++.       ++.++|  .+.+++.+|..|.||+++|...
T Consensus       283 ~~A~~~~~~-------~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~  321 (437)
T 1n11_A          283 HLVAQEGHV-------PVADVLIKHGVMVDATTRMGYTPLHVASHY  321 (437)
T ss_dssp             HHHHHHTCH-------HHHHHHHHHTCCTTCCCSSCCCHHHHHHHS
T ss_pred             HHHHHcCCH-------HHHHHHHhCCccCCCCCCCCCCHHHHHHHc
Confidence            666666655       555555  4556666666666666666543

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.97  E-value=2.2e-31  Score=235.52  Aligned_cols=193  Identities=22%  Similarity=0.177  Sum_probs=169.3

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchh-cCCChHHHHHHHcCcHHHHHHHHccC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKN-KIGCTAFFYAAGSGMVEIVEEAMKGN   80 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d-~~g~tpLh~Aa~~g~~~iv~~Ll~~~   80 (375)
                      ++.+.|.+.|.+++.. |..|.||||+|+..|+.+++++|+++  +.+++..+ ..|.||||+|+..|+.++++.|++.+
T Consensus        23 ~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g   99 (240)
T 3eu9_A           23 ERCRELVEAGYDVRQP-DKENVTLLHWAAINNRIDLVKYYISK--GAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYG   99 (240)
T ss_dssp             HHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTT
T ss_pred             HHHHHHHHcCCCcCCC-CCCCCCHHHHHHHhCCHHHHHHHHHc--CCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcC
Confidence            4567788899999887 89999999999999999999999999  66666444 55999999999999999999999999


Q ss_pred             CCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCc-HHHHHHHHhcCCcccccccC-CC
Q 037666           81 KDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDL-YAVALRLLKDRPQLATKRDR-NE  157 (375)
Q Consensus        81 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~-~~~v~~LL~~~~~~~~~~d~-~G  157 (375)
                      .+. +.+|..|.||||.|+..|+.+++++|++.+. ++..|.+|.||||.|+..++ .++++.|++. +.+++.++. +|
T Consensus       100 ~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~-~~~~~~~~~~~g  177 (240)
T 3eu9_A          100 ADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF-NVSVNLGDKYHK  177 (240)
T ss_dssp             CCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT-TCCTTCCCTTTC
T ss_pred             CCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhc-CCCcchhhccCC
Confidence            886 7889999999999999999999999999988 88889999999999997666 6777777776 888998887 89


Q ss_pred             CcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          158 ETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       158 ~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      +||||+|++.+..       ++.++|  .+++++.+|..|+||+++|.+..
T Consensus       178 ~t~L~~A~~~~~~-------~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~  221 (240)
T 3eu9_A          178 NTALHWAVLAGNT-------TVISLLLEAGANVDAQNIKGESALDLAKQRK  221 (240)
T ss_dssp             CCHHHHHHHHTCH-------HHHHHHHHHTCCTTCBCTTSCBHHHHHHHTT
T ss_pred             CcHHHHHHHcCCH-------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            9999999999987       788777  67889999999999999988764

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.97  E-value=2.7e-31  Score=242.55  Aligned_cols=179  Identities=11%  Similarity=0.037  Sum_probs=163.7

Q ss_pred             cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCCh
Q 037666           14 IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTL   93 (375)
Q Consensus        14 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t   93 (375)
                      ++.. |.+|+||||+|+..|+.+++++|++.  +.+++.+|.+|+||||+|+..|+.+++++|++.++++ +.+|.+|.|
T Consensus        52 ~~~~-~~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t  127 (285)
T 3d9h_A           52 LMGD-AVSDWSPMHEAAIHGHQLSLRNLISQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHT  127 (285)
T ss_dssp             TCSS-SCCSCCHHHHHHHTTCHHHHHHHHHT--TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCC
T ss_pred             ccCC-CccCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCC
Confidence            3444 88999999999999999999999999  8899999999999999999999999999999999996 889999999


Q ss_pred             HHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCC
Q 037666           94 PIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSS  172 (375)
Q Consensus        94 pLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~  172 (375)
                      |||+|+..|+.+++++|++.++ .+. +.+|.||||+|+..|+.+++++|++. +.+++.+|.+|+||||+|+..++.  
T Consensus       128 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~--  203 (285)
T 3d9h_A          128 PLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQR--  203 (285)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTSCHHHHHHHHTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCH--
T ss_pred             HHHHHHHcCHHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcH--
Confidence            9999999999999999999988 443 45599999999999999999999998 899999999999999999999988  


Q ss_pred             CCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          173 NQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       173 ~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                           +++++|  .+++++. |..|.||+++|.+..
T Consensus       204 -----~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~  233 (285)
T 3d9h_A          204 -----ACVKKLLESGADVNQ-GKGQDSPLHAVVRTA  233 (285)
T ss_dssp             -----HHHHHHHHTTCCTTC-CBTTBCHHHHHHHTT
T ss_pred             -----HHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC
Confidence                 788877  5677774 889999999987654

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.97  E-value=2.2e-31  Score=234.86  Aligned_cols=173  Identities=21%  Similarity=0.194  Sum_probs=162.8

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.++|.++|.+++.. |..|+||||+|+..|+.+++++|+++  +.+++.+|..|.||||+|+..|+.+++++|++.+.
T Consensus        54 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~  130 (231)
T 3aji_A           54 EIVEFLLQLGVPVNDK-DDAGWSPLHIAASAGXDEIVKALLVK--GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA  130 (231)
T ss_dssp             HHHHHHHHTTCCSCCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHhCCCCCCc-CCCCCCHHHHHHHcCHHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            4678888999999987 99999999999999999999999999  89999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      +. +.+|..|.||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+..++.+++++|+++ |.+++.+|.+|+||
T Consensus       131 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~  208 (231)
T 3aji_A          131 NP-DAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ-GASIYIENKEEKTP  208 (231)
T ss_dssp             CT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCH
T ss_pred             CC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCH
Confidence            86 8899999999999999999999999999998 888999999999999999999999999998 99999999999999


Q ss_pred             HHHHHHhcCCCCCCCccchhhccchh
Q 037666          161 LHVLARKNLTSSNQNPCGVENVVPKK  186 (375)
Q Consensus       161 Lh~A~~~~~~~~~~~~~~v~~~L~~~  186 (375)
                      ||+|++.+..       ++.++|.+.
T Consensus       209 l~~A~~~~~~-------~i~~lL~~~  227 (231)
T 3aji_A          209 LQVAKGGLGL-------ILKRLAEGE  227 (231)
T ss_dssp             HHHSCHHHHH-------HHHHHHHHH
T ss_pred             HHHHHhhHHH-------HHHHHHccc
Confidence            9999988877       888887543

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.97  E-value=8e-33  Score=245.26  Aligned_cols=178  Identities=17%  Similarity=0.123  Sum_probs=138.6

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCC--hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMS--TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIV   96 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~--~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh   96 (375)
                      |.+|+||||+|+..|+.+++++|++...  +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||
T Consensus         5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~   83 (236)
T 1ikn_D            5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLH   83 (236)
T ss_dssp             --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHH
T ss_pred             CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHH
Confidence            7788888888888888888888887631  1257778888888888888888888888888888775 777888888888


Q ss_pred             HHHHcCcHHHHHHHHHhcc-------CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccC-CCCcHHHHHHHhc
Q 037666           97 RAAALGQRQTVVLLYEKTK-------GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDR-NEETALHVLARKN  168 (375)
Q Consensus        97 ~Aa~~g~~~iv~~Ll~~~~-------~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~-~G~T~Lh~A~~~~  168 (375)
                      +|+..|+.+++++|++.++       .+..|..|.||||+|+..|+.+++++|+++ |.+++.+|. +|+||||+|+..+
T Consensus        84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~  162 (236)
T 1ikn_D           84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL-GADVNAQEPCNGRTALHLAVDLQ  162 (236)
T ss_dssp             HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTT
T ss_pred             HHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcC
Confidence            8888888888888888764       234667788888888888888888888887 788888887 8888888888887


Q ss_pred             CCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          169 LTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       169 ~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      +.       +++++|  .+++++.+|..|+||+++|.+.
T Consensus       163 ~~-------~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~  194 (236)
T 1ikn_D          163 NP-------DLVSLLLKCGADVNRVTYQGYSPYQLTWGR  194 (236)
T ss_dssp             CH-------HHHHHHHTTTCCSCCCCTTCCCGGGGCTTS
T ss_pred             CH-------HHHHHHHHcCCCCCcccCCCCCHHHHHHcc
Confidence            76       677766  6677888888888888887654

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.97  E-value=2.9e-31  Score=223.58  Aligned_cols=167  Identities=18%  Similarity=0.122  Sum_probs=149.1

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHc
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAAL  101 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~  101 (375)
                      +.||||.|+..|+.++++.|++.. +..++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~   79 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRKG-DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTG   79 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTTC-SGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHT
T ss_pred             chhhHHHHHHcCCHHHHHHHHHcC-cccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHC
Confidence            578999999999999999999995 5558999999999999999999999999999999996 88999999999999999


Q ss_pred             CcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchh
Q 037666          102 GQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVE  180 (375)
Q Consensus       102 g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~  180 (375)
                      |+.+++++|++.+. ++.+|.+|+||||+|+..++.+++++|+++ |.+++.+|.+|+||||+|++.++.       ++.
T Consensus        80 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~-------~~~  151 (172)
T 3v30_A           80 GYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR-GADLTTEADSGYTPMDLAVALGYR-------KVQ  151 (172)
T ss_dssp             TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCH-------HHH
T ss_pred             CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHhCcH-------HHH
Confidence            99999999999998 888999999999999999999999999998 999999999999999999999988       888


Q ss_pred             hcc--chhhHhhhcCCCCCh
Q 037666          181 NVV--PKKLAEAINTGGLTP  198 (375)
Q Consensus       181 ~~L--~~~~~~~~n~~g~tp  198 (375)
                      ++|  ++.+...+|..|.||
T Consensus       152 ~~L~~~~~~~~~~~~~~~~p  171 (172)
T 3v30_A          152 QVIENHILKLFQSNLVPADP  171 (172)
T ss_dssp             HHHHHHHHHHSCC-------
T ss_pred             HHHHHHHHHHhcccCCCCCC
Confidence            888  667777888888887

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.97  E-value=4.4e-31  Score=222.14  Aligned_cols=146  Identities=24%  Similarity=0.219  Sum_probs=135.0

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++++.|+++|+++|.+ |.+|+||||+|+..|+.++++.|++.  +.+++.+|.+|+||||+|++.|+.+++++|++.++
T Consensus        18 ~~v~~Ll~~Gadvn~~-d~~g~t~l~~a~~~~~~~~~~~ll~~--gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga   94 (169)
T 4gpm_A           18 DRVKDLIENGADVNAS-DSDGRTPLHHAAENGHKEVVKLLISK--GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA   94 (169)
T ss_dssp             HHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhc--ccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcC
Confidence            5678888899999998 99999999999999999999999999  89999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCccccc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATK  152 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~  152 (375)
                      ++ +.+|.+|+||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+++|+.+++++|+++ |++++.
T Consensus        95 dv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~-GA~ie~  164 (169)
T 4gpm_A           95 DV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQ-GGWLEH  164 (169)
T ss_dssp             CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-------
T ss_pred             CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCC
Confidence            96 8999999999999999999999999999999 889999999999999999999999999988 887754

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.97  E-value=1e-31  Score=241.03  Aligned_cols=177  Identities=20%  Similarity=0.128  Sum_probs=155.1

Q ss_pred             CCCcHHHHHHHcCCHH----HHHHHHHcCChhhHhc----hhcCCChHHHHHHHc---CcHHHHHHHHccCCCCcc----
Q 037666           21 LGNTALHVAAQANCID----FVKELLKMMSTEDLAK----KNKIGCTAFFYAAGS---GMVEIVEEAMKGNKDIAM----   85 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~----~v~~Ll~~~~~~~~~~----~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~----   85 (375)
                      .|+||||.|+..|+.+    ++++|++.  +.+++.    +|.+|+||||+|+..   |+.+++++|++.+++...    
T Consensus         1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~--g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~   78 (256)
T 2etb_A            1 FDRDRLFSVVSRGVPEELTGLLEYLRWN--SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL   78 (256)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHc--CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence            4899999999999997    55667777  788888    899999999999999   999999999998876421    


Q ss_pred             ------ccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccch-------------hhHHHHHHHhcCcHHHHHHHHhc
Q 037666           86 ------VPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDE-------------CIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        86 ------~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~-------------g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                            .+|.+|.||||+|+..|+.+++++|++.++ ++.+|..             |+||||+|+..|+.+++++|+++
T Consensus        79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~  158 (256)
T 2etb_A           79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN  158 (256)
T ss_dssp             GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred             cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence                  234779999999999999999999999998 7777765             99999999999999999999994


Q ss_pred             --CCcccccccCCCCcHHHHHHHh--cCCCCCCCccc-------hhhcc--chhhH-------hhhcCCCCChhhhhHHH
Q 037666          146 --RPQLATKRDRNEETALHVLARK--NLTSSNQNPCG-------VENVV--PKKLA-------EAINTGGLTPTALFSEK  205 (375)
Q Consensus       146 --~~~~~~~~d~~G~T~Lh~A~~~--~~~~~~~~~~~-------v~~~L--~~~~~-------~~~n~~g~tpl~~a~~~  205 (375)
                        .|.++|.+|.+|+||||+|+..  +..       +       +.++|  .++++       +.+|.+|+||+++|.+.
T Consensus       159 ~~~ga~~n~~d~~g~TpLh~A~~~~~~~~-------~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~  231 (256)
T 2etb_A          159 PHQPASLEATDSLGNTVLHALVMIADNSP-------ENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKE  231 (256)
T ss_dssp             SSCCCCTTCCCTTSCCHHHHHHHHCCSCH-------HHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred             cccCCCcCccCCCCCCHHHHHHHcccCCc-------hhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHh
Confidence              4999999999999999999994  433       4       77777  67888       88999999999999876


Q ss_pred             H
Q 037666          206 H  206 (375)
Q Consensus       206 ~  206 (375)
                      .
T Consensus       232 g  232 (256)
T 2etb_A          232 G  232 (256)
T ss_dssp             T
T ss_pred             C
Confidence            4

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.97  E-value=2e-32  Score=242.71  Aligned_cols=183  Identities=16%  Similarity=0.050  Sum_probs=165.4

Q ss_pred             ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC-----Ccc
Q 037666           11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD-----IAM   85 (375)
Q Consensus        11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~-----~~~   85 (375)
                      +.+++.. |..|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.+++     ..+
T Consensus        35 ~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~  111 (236)
T 1ikn_D           35 LAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGA--GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILK  111 (236)
T ss_dssp             CCCCCCC-CTTCCCHHHHHHHTTCHHHHHCCCSC--CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGG
T ss_pred             HHHhhcc-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhh
Confidence            3478887 89999999999999999999999999  899999999999999999999999999999998864     236


Q ss_pred             ccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccc-hhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHH
Q 037666           86 VPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDD-ECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHV  163 (375)
Q Consensus        86 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~-~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~  163 (375)
                      ..|..|.||||+|+..|+.+++++|++.++ ++.++. .|+||||+|+..|+.+++++|+++ |.+++.+|.+|+||||+
T Consensus       112 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~  190 (236)
T 1ikn_D          112 ATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC-GADVNRVTYQGYSPYQL  190 (236)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT-TCCSCCCCTTCCCGGGG
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcccCCCCCHHHH
Confidence            788899999999999999999999999999 888887 999999999999999999999998 99999999999999999


Q ss_pred             HHHhcCCCCCCCccchhhcc--chhhHh--hhcCCCCChhhhhHH
Q 037666          164 LARKNLTSSNQNPCGVENVV--PKKLAE--AINTGGLTPTALFSE  204 (375)
Q Consensus       164 A~~~~~~~~~~~~~~v~~~L--~~~~~~--~~n~~g~tpl~~a~~  204 (375)
                      |+.+++.       ++.++|  .+++..  ..+.+|.||.+...+
T Consensus       191 A~~~~~~-------~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~  228 (236)
T 1ikn_D          191 TWGRPST-------RIQQQLGQLTLENLQMLPESEDEESYDTESE  228 (236)
T ss_dssp             CTTSSCH-------HHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred             HHccCch-------HHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence            9999988       888887  556554  778999999987544

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.97  E-value=4.5e-31  Score=246.52  Aligned_cols=195  Identities=20%  Similarity=0.163  Sum_probs=148.2

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhh--------------------------------
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTED--------------------------------   49 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~--------------------------------   49 (375)
                      +++++|+++|+++|.+.+..|+||||+|+..|+.++|++|+++  +++                                
T Consensus        39 ~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (337)
T 4g8k_A           39 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGA  116 (337)
T ss_dssp             HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred             HHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHc--CCchhhhccCCCchhHHHHhcccchhhHHhhhccc
Confidence            4678888899999987445699999999999999999999998  443                                


Q ss_pred             -HhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCc---------cccCCCCChHHHHHHHcCcHHHHHHHHHh-cc-CC
Q 037666           50 -LAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIA---------MVPGGDGTLPIVRAAALGQRQTVVLLYEK-TK-GS  117 (375)
Q Consensus        50 -~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~---------~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~-~~  117 (375)
                       ++..|..|+||||+|+..|+.++++.|++.++++.         ...+..|.||||+|+.+|+.+++++|+++ +. ++
T Consensus       117 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n  196 (337)
T 4g8k_A          117 DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN  196 (337)
T ss_dssp             CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT
T ss_pred             hhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC
Confidence             45567778888888888888888888888776641         12345678888888888888888888865 44 67


Q ss_pred             cccchhhHHHHHHHhcCc----HHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc---chhhHhh
Q 037666          118 LTDDECIELLVKLIETDL----YAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV---PKKLAEA  190 (375)
Q Consensus       118 ~~d~~g~t~Lh~A~~~~~----~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L---~~~~~~~  190 (375)
                      .+|..|+|++|.++..++    .++++.|+++ |.++|.+|.+|+||||+|++.+..       ++++.|   .+.+++.
T Consensus       197 ~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~-gad~n~~d~~g~t~L~~a~~~~~~-------~~v~~Ll~~~~~~vn~  268 (337)
T 4g8k_A          197 ACDNMGRNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHL-------GLVQRLLEQEHIEIND  268 (337)
T ss_dssp             CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCH-------HHHHHHHTSTTCCTTC
T ss_pred             ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhhhh-------HHHHHHHHhcCCcccC
Confidence            778888888877665432    3455666665 888888888888888888888766       555544   3577888


Q ss_pred             hcCCCCChhhhhHHHH
Q 037666          191 INTGGLTPTALFSEKH  206 (375)
Q Consensus       191 ~n~~g~tpl~~a~~~~  206 (375)
                      +|.+|+||+++|++..
T Consensus       269 ~d~~G~TpL~~A~~~g  284 (337)
T 4g8k_A          269 TDSDGKTALLLAVELK  284 (337)
T ss_dssp             BCTTSCBHHHHHHHTT
T ss_pred             cCCCCCCHHHHHHHcC
Confidence            8888888888877653

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.97  E-value=2.9e-31  Score=227.75  Aligned_cols=161  Identities=17%  Similarity=0.126  Sum_probs=152.0

Q ss_pred             cccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCC
Q 037666           12 DEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDG   91 (375)
Q Consensus        12 ~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g   91 (375)
                      ..+|.+ |..|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|..|
T Consensus        26 ~~~n~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g  101 (192)
T 2rfm_A           26 FLRNYR-DSYNRTPLMVACMLGMENAIDKLVEN--FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSG  101 (192)
T ss_dssp             HHHTCC-CTTCCCHHHHHHHHTCGGGHHHHHHH--HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTS
T ss_pred             HHHhCc-CCCCCCHHHHHHHcCCHHHHHHHHHh--ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCC
Confidence            345666 99999999999999999999999999  8999999999999999999999999999999999996 8899999


Q ss_pred             ChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCC
Q 037666           92 TLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLT  170 (375)
Q Consensus        92 ~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~  170 (375)
                      .||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..|+.+++++|++. |.+++.+|.+|+||||+|+..++.
T Consensus       102 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~  180 (192)
T 2rfm_A          102 KTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL-GADISARDLTGLTAEASARIFGRQ  180 (192)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred             CcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhCcH
Confidence            999999999999999999999998 888999999999999999999999999998 999999999999999999999987


Q ss_pred             CCCCCccchhhccc
Q 037666          171 SSNQNPCGVENVVP  184 (375)
Q Consensus       171 ~~~~~~~~v~~~L~  184 (375)
                             ++.++|.
T Consensus       181 -------~~v~~Ll  187 (192)
T 2rfm_A          181 -------EVIKIFT  187 (192)
T ss_dssp             -------HHHHHHH
T ss_pred             -------HHHHHHH
Confidence                   7887763

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.97  E-value=9.2e-31  Score=229.60  Aligned_cols=172  Identities=17%  Similarity=0.192  Sum_probs=161.8

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.++|.++|++++.. |..|+||||+|+..|+.+++++|+++. +.+++..|..|.||||+|+..|+.++++.|++.++
T Consensus        39 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~  116 (223)
T 2f8y_A           39 DAAKRLLEASADANIQ-DNMGRTPLHAAVSADAQGVFQILIRNR-ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHA  116 (223)
T ss_dssp             HHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHBT-TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCC
Confidence            4678888899999987 999999999999999999999999994 44899999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      ++ +.+|.+|.||||+|+..|+.+++++|++.+. ++.+|..|+||||+|+++++.+++++|+++ +.+++.+|.+|+||
T Consensus       117 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~  194 (223)
T 2f8y_A          117 DV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH-FANRDITDHMDRLP  194 (223)
T ss_dssp             CT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCH
T ss_pred             CC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCccccccCCCH
Confidence            96 8899999999999999999999999999998 888999999999999999999999999998 99999999999999


Q ss_pred             HHHHHHhcCCCCCCCccchhhccc
Q 037666          161 LHVLARKNLTSSNQNPCGVENVVP  184 (375)
Q Consensus       161 Lh~A~~~~~~~~~~~~~~v~~~L~  184 (375)
                      ||+|+++++.       ++.++|.
T Consensus       195 l~~A~~~~~~-------~i~~~L~  211 (223)
T 2f8y_A          195 RDIAQERMHH-------DIVRLLD  211 (223)
T ss_dssp             HHHHHHTTCH-------HHHHHHH
T ss_pred             HHHHHHhcch-------HHHHHHH
Confidence            9999999988       8888873

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.97  E-value=3.1e-31  Score=237.92  Aligned_cols=169  Identities=18%  Similarity=0.156  Sum_probs=154.0

Q ss_pred             HHHHHhhCcccccc----ccCCCCCcHHHHHHHc---CCHHHHHHHHHcCChhhHhc-----------hhcCCChHHHHH
Q 037666            3 AKDIYDKYEDEIGQ----EITNLGNTALHVAAQA---NCIDFVKELLKMMSTEDLAK-----------KNKIGCTAFFYA   64 (375)
Q Consensus         3 v~~lL~~~~~~~~~----~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~-----------~d~~g~tpLh~A   64 (375)
                      +.++|.++|.+++.    . |.+|+||||+|+..   |+.+++++|++.  +.+++.           .|..|+||||+|
T Consensus        21 ll~~l~~~g~~i~~~~~~~-d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~--g~~~~~~~~~~~~~~~~~d~~g~t~L~~A   97 (256)
T 2etb_A           21 LLEYLRWNSKYLTDSAYTE-GSTGKTCLMKAVLNLQDGVNACIMPLLQI--DKDSGNPKPLVNAQCTDEFYQGHSALHIA   97 (256)
T ss_dssp             HHHHHHHHTCCTTSGGGSB-TTTTBCHHHHHHHTCBTTBCTTHHHHHHH--HHHTTCSSCGGGCCCCSTTTTTCCHHHHH
T ss_pred             HHHHHHHcCCCcccccccC-CCCCCCHHHHHHHccccchHHHHHHHHhc--CCcccchhhhcccccccccccCCCHHHHH
Confidence            55677789999998    5 99999999999999   999999999999  777663           347899999999


Q ss_pred             HHcCcHHHHHHHHccCCCCccccCCC-------------CChHHHHHHHcCcHHHHHHHHH---hcc-CCcccchhhHHH
Q 037666           65 AGSGMVEIVEEAMKGNKDIAMVPGGD-------------GTLPIVRAAALGQRQTVVLLYE---KTK-GSLTDDECIELL  127 (375)
Q Consensus        65 a~~g~~~iv~~Ll~~~~~~~~~~d~~-------------g~tpLh~Aa~~g~~~iv~~Ll~---~~~-~~~~d~~g~t~L  127 (375)
                      +..|+.+++++|++.++++ +.+|..             |.||||+|+..|+.+++++|++   .+. ++.+|.+|+|||
T Consensus        98 ~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpL  176 (256)
T 2etb_A           98 IEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVL  176 (256)
T ss_dssp             HHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred             HHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHH
Confidence            9999999999999999996 777776             9999999999999999999999   777 888999999999


Q ss_pred             HHHHh--cCcHH-------HHHHHHhcCCccc-------ccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          128 VKLIE--TDLYA-------VALRLLKDRPQLA-------TKRDRNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       128 h~A~~--~~~~~-------~v~~LL~~~~~~~-------~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      |+|+.  +++.+       +++.|+++ |.++       +.+|.+|+||||+|++.++.       ++.++|
T Consensus       177 h~A~~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~-------~~v~~L  240 (256)
T 2etb_A          177 HALVMIADNSPENSALVIHMYDGLLQM-GARLCPTVQLEEISNHQGLTPLKLAAKEGKI-------EIFRHI  240 (256)
T ss_dssp             HHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHSTTCCGGGCCCTTSCCHHHHHHHTTCH-------HHHHHH
T ss_pred             HHHHHcccCCchhhHHHHHHHHHHHHc-CCCcccccccccccCCCCCCHHHHHHHhCCH-------HHHHHH
Confidence            99999  78888       99999998 8888       89999999999999999988       888887

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.97  E-value=2.5e-30  Score=216.72  Aligned_cols=154  Identities=14%  Similarity=0.151  Sum_probs=146.7

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHH
Q 037666           21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAA  100 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~  100 (375)
                      +|.||||.|+..|+.+++++|++.  +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+.
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~   78 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQ--ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACS   78 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHH
Confidence            589999999999999999999999  7889999999999999999999999999999999986 8889999999999999


Q ss_pred             cCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccch
Q 037666          101 LGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGV  179 (375)
Q Consensus       101 ~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v  179 (375)
                      .|+.+++++|++.+. ++.+|.+|+||||+|+..++.+++++|+++ |.+++.+|.+|+||||+|++.++.       ++
T Consensus        79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~-------~~  150 (167)
T 3v31_A           79 KGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES-GADPTIETDSGYNSMDLAVALGYR-------SV  150 (167)
T ss_dssp             HTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCH-------HH
T ss_pred             cCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcH-------HH
Confidence            999999999999998 888999999999999999999999999997 999999999999999999999988       88


Q ss_pred             hhccch
Q 037666          180 ENVVPK  185 (375)
Q Consensus       180 ~~~L~~  185 (375)
                      .++|..
T Consensus       151 ~~~L~~  156 (167)
T 3v31_A          151 QQVIES  156 (167)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888743

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.97  E-value=6.9e-31  Score=239.86  Aligned_cols=178  Identities=16%  Similarity=0.072  Sum_probs=161.8

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      +++++|.++|++++..   +|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus        45 ~~v~~Ll~~g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga  119 (285)
T 3kea_A           45 RLVCTLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILLFS--GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNW  119 (285)
T ss_dssp             HHHHHHHHTTGGGSCC---TTCCHHHHHTTSSSCHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCG
T ss_pred             HHHHHHHhCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Confidence            4678888999999876   499999999999999999999999  89999999999999999999999999999999999


Q ss_pred             CCccccCCCC-ChHHHHHHHcCcHHHHHHHHHhccCCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDG-TLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g-~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      ++ +.+|..| .||||+|+..|+.+++++|++.++.......|+||||+|+..|+.+++++|+++ |.+++.+|.+|+||
T Consensus       120 ~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~  197 (285)
T 3kea_A          120 RL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDY-MTSTNTNNSLLFIP  197 (285)
T ss_dssp             GG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHH-HHHTCTTCCCBCCT
T ss_pred             CC-CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHc-CCCCCcccCCCCCh
Confidence            96 8899999 899999999999999999999998222223899999999999999999999998 99999999999998


Q ss_pred             -HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcC
Q 037666          161 -LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINT  193 (375)
Q Consensus       161 -Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~  193 (375)
                       ||+|++.++.       ++.++|  .+++++.+|.
T Consensus       198 ~L~~A~~~~~~-------~~v~~Ll~~gad~~~~~~  226 (285)
T 3kea_A          198 DIKLAIDNKDI-------EMLQALFKYDINIYSANL  226 (285)
T ss_dssp             THHHHHHHTCH-------HHHHHHTTSCBCSTTTTG
T ss_pred             HHHHHHHcCCH-------HHHHHHHHcCCCCCCCCh
Confidence             9999999987       788877  6777777763

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.97  E-value=3.8e-31  Score=239.73  Aligned_cols=195  Identities=18%  Similarity=0.131  Sum_probs=154.0

Q ss_pred             ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--ChhhHh----chhcCCChHHHHHHHc---CcHHHHHHHHccCC
Q 037666           11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMM--STEDLA----KKNKIGCTAFFYAAGS---GMVEIVEEAMKGNK   81 (375)
Q Consensus        11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~--~~~~~~----~~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~   81 (375)
                      ++..+.. |..|+||||.|++.|+.++|+.|++..  .+.+++    ..|..|+||||+|+..   |+.+++++|++.++
T Consensus         3 ~a~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga   81 (273)
T 2pnn_A            3 SAGEKPP-RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR   81 (273)
T ss_dssp             ---------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred             cccCCCC-CcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence            4444555 889999999999999999999999851  033343    4588999999999986   99999999999875


Q ss_pred             CCc----------cccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccc--------------hhhHHHHHHHhcCcH
Q 037666           82 DIA----------MVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDD--------------ECIELLVKLIETDLY  136 (375)
Q Consensus        82 ~~~----------~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~--------------~g~t~Lh~A~~~~~~  136 (375)
                      +..          ..+|.+|.||||+|+..|+.+++++|++.++ ++.++.              .|+||||+|+..|+.
T Consensus        82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~  161 (273)
T 2pnn_A           82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL  161 (273)
T ss_dssp             HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH
T ss_pred             cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCH
Confidence            421          2256789999999999999999999999998 777776              799999999999999


Q ss_pred             HHHHHHHhc--CCcccccccCCCCcHHHHHHHhcCCCCCCC--ccchhhcc--chhhHh-------hhcCCCCChhhhhH
Q 037666          137 AVALRLLKD--RPQLATKRDRNEETALHVLARKNLTSSNQN--PCGVENVV--PKKLAE-------AINTGGLTPTALFS  203 (375)
Q Consensus       137 ~~v~~LL~~--~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~--~~~v~~~L--~~~~~~-------~~n~~g~tpl~~a~  203 (375)
                      +++++|++.  .|.+++.+|.+|+||||+|+..++......  ..++.++|  .+++++       .+|.+|+||+++|.
T Consensus       162 ~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~  241 (273)
T 2pnn_A          162 AIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAA  241 (273)
T ss_dssp             HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHH
T ss_pred             HHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHH
Confidence            999999994  499999999999999999999876210000  00455555  667775       48999999999998


Q ss_pred             HHH
Q 037666          204 EKH  206 (375)
Q Consensus       204 ~~~  206 (375)
                      +..
T Consensus       242 ~~g  244 (273)
T 2pnn_A          242 SSG  244 (273)
T ss_dssp             HTT
T ss_pred             HhC
Confidence            654

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.97  E-value=4.4e-30  Score=232.67  Aligned_cols=180  Identities=19%  Similarity=0.147  Sum_probs=146.6

Q ss_pred             hCcccccc---ccCCCCCcHHHHHHHc---CCHHHHHHHHHcCChhh-------Hhc----hhcCCChHHHHHHHcCcHH
Q 037666            9 KYEDEIGQ---EITNLGNTALHVAAQA---NCIDFVKELLKMMSTED-------LAK----KNKIGCTAFFYAAGSGMVE   71 (375)
Q Consensus         9 ~~~~~~~~---~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~-------~~~----~d~~g~tpLh~Aa~~g~~~   71 (375)
                      +.+.+++.   ..|..|+||||+|+..   |+.+++++|+++  +++       ++.    .|..|+||||+|+..|+.+
T Consensus        38 ~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~--ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~  115 (273)
T 2pnn_A           38 RSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDV--ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMT  115 (273)
T ss_dssp             HSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHH--HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHH
T ss_pred             hcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHh--hccccchhHHhhcccccccCCCCCHHHHHHHcCCHH
Confidence            46666542   3378999999999987   999999999999  665       343    5678999999999999999


Q ss_pred             HHHHHHccCCCCccccCC--------------CCChHHHHHHHcCcHHHHHHHHH---hcc-CCcccchhhHHHHHHHhc
Q 037666           72 IVEEAMKGNKDIAMVPGG--------------DGTLPIVRAAALGQRQTVVLLYE---KTK-GSLTDDECIELLVKLIET  133 (375)
Q Consensus        72 iv~~Ll~~~~~~~~~~d~--------------~g~tpLh~Aa~~g~~~iv~~Ll~---~~~-~~~~d~~g~t~Lh~A~~~  133 (375)
                      ++++|++.++++ +.+|.              .|.||||+|+..|+.+++++|++   .+. ++.+|.+|+||||+|+..
T Consensus       116 ~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~  194 (273)
T 2pnn_A          116 LVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEV  194 (273)
T ss_dssp             HHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred             HHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHc
Confidence            999999999996 77776              79999999999999999999999   777 888999999999999998


Q ss_pred             Cc---------HHHHHHHHhcCCcccc-------cccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chh-hHhhhcCC
Q 037666          134 DL---------YAVALRLLKDRPQLAT-------KRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKK-LAEAINTG  194 (375)
Q Consensus       134 ~~---------~~~v~~LL~~~~~~~~-------~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~-~~~~~n~~  194 (375)
                      ++         .++++.|++. |.+++       .+|.+|+||||+|++.++.       +++++|  +++ ++......
T Consensus       195 ~~~~~~~~~~~~~~v~~Ll~~-ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~-------~iv~~Ll~~ga~dp~~~~~~  266 (273)
T 2pnn_A          195 ADNTVDNTKFVTSMYNEILIL-GAKLHPTLKLEEITNRKGLTPLALAASSGKI-------GVLAYILQREIHEPECRHAA  266 (273)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH-------HHHHHHHHHHTC--------
T ss_pred             cCcchhHHHHHHHHHHHHHHh-hhhcccccccccccCCCCCCHHHHHHHhChH-------HHHHHHHHCCCCCchhhhhh
Confidence            87         7899999988 77776       5899999999999999988       888887  455 55555555


Q ss_pred             CCChh
Q 037666          195 GLTPT  199 (375)
Q Consensus       195 g~tpl  199 (375)
                      +.+|.
T Consensus       267 ~~~~~  271 (273)
T 2pnn_A          267 AHHHH  271 (273)
T ss_dssp             -----
T ss_pred             hhhcc
Confidence            55543

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.97  E-value=1e-30  Score=239.57  Aligned_cols=178  Identities=20%  Similarity=0.153  Sum_probs=162.3

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      +.+|.||||.||..|+.+++++|+++  +.+++..|.+|.||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|
T Consensus        37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A  113 (299)
T 1s70_B           37 KFDDGAVFLAACSSGDTEEVLRLLER--GADINYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAA  113 (299)
T ss_dssp             EECHHHHHHHHHHHTCHHHHHHHHHH--CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred             ccCCccHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence            45678999999999999999999999  8899999999999999999999999999999999996 88999999999999


Q ss_pred             HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccc--------------------------
Q 037666           99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLAT--------------------------  151 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~--------------------------  151 (375)
                      +..|+.+++++|+++++ ++..|.+|.||||+|+..++.++++.++...+.+++                          
T Consensus       114 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  193 (299)
T 1s70_B          114 ASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV  193 (299)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             HHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchh
Confidence            99999999999999998 888999999999999999999999988876555443                          


Q ss_pred             cccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          152 KRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       152 ~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ..|..|.||||+|+..|+.       ++.++|  .+++++.+|.+|.||+++|.+..
T Consensus       194 ~~~~~g~t~L~~A~~~g~~-------~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~  243 (299)
T 1s70_B          194 RHAKSGGTALHVAAAKGYT-------EVLKLLIQARYDVNIKDYDGWTPLHAAAHWG  243 (299)
T ss_dssp             CCTTTCCCHHHHHHHHTCH-------HHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             hhcCCCCCHHHHHHHCCcH-------HHHHHHHHcCCCCCCcCCCCCcHHHHHHhcC
Confidence            3568899999999999988       788877  67899999999999999987653

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.96  E-value=1e-30  Score=246.67  Aligned_cols=182  Identities=18%  Similarity=0.105  Sum_probs=160.7

Q ss_pred             ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCC
Q 037666           11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGD   90 (375)
Q Consensus        11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~   90 (375)
                      +.+.+.. |.+|.||||+|+..|+.++|++|+++  +.+++.+|..|.||||+|+..|+.+++++|++.+++.   .+.+
T Consensus        10 ~~~~~~~-d~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~   83 (364)
T 3ljn_A           10 KLNRIKS-DDENMEKIHVAARKGQTDEVRRLIET--GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWH   83 (364)
T ss_dssp             ------C-CHHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBT
T ss_pred             CCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccC
Confidence            3455665 88999999999999999999999999  8999999999999999999999999999999999854   3458


Q ss_pred             CChHHHHHHHcCcHHHHHHHHHh----cc-CCc-----------------ccchhhHHHHHHHhcC--cHHHHHHHHhcC
Q 037666           91 GTLPIVRAAALGQRQTVVLLYEK----TK-GSL-----------------TDDECIELLVKLIETD--LYAVALRLLKDR  146 (375)
Q Consensus        91 g~tpLh~Aa~~g~~~iv~~Ll~~----~~-~~~-----------------~d~~g~t~Lh~A~~~~--~~~~v~~LL~~~  146 (375)
                      |.||||+|+..|+.+++++|++.    +. .+.                 .|.+|.||||+|+..|  +.+++++|++. 
T Consensus        84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-  162 (364)
T 3ljn_A           84 GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-  162 (364)
T ss_dssp             TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH-
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc-
Confidence            99999999999999999999998    44 333                 7778999999999999  99999999999 


Q ss_pred             CcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhh-----HhhhcCCCCChhhhhHHHH
Q 037666          147 PQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKL-----AEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       147 ~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~-----~~~~n~~g~tpl~~a~~~~  206 (375)
                      |.+++.+|.+|+||||+|+..++.       +++++|  .+++     ++.+|..|.||+++|+...
T Consensus       163 ga~~~~~d~~g~t~L~~A~~~g~~-------~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g  222 (364)
T 3ljn_A          163 GASPTAKDKADETPLMRAMEFRNR-------EALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN  222 (364)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT
T ss_pred             CCCCcccCCCCCCHHHHHHHcCCH-------HHHHHHHhcccccccccccccCCCCCcHHHHHHHcC
Confidence            999999999999999999999988       788877  5556     8899999999999998653

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.96  E-value=3.7e-30  Score=233.98  Aligned_cols=153  Identities=22%  Similarity=0.203  Sum_probs=98.5

Q ss_pred             cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChh-hHhchhcCCChHHHHHH-----HcCcHHHHHHHHccCCCCcccc
Q 037666           14 IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTE-DLAKKNKIGCTAFFYAA-----GSGMVEIVEEAMKGNKDIAMVP   87 (375)
Q Consensus        14 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~-~~~~~d~~g~tpLh~Aa-----~~g~~~iv~~Ll~~~~~~~~~~   87 (375)
                      +|.. |.+|+||||+|+..|+.+++++|++.  +. +++..|..|+||||+|+     ..|+.++++.|++.+.+. ...
T Consensus       104 ~n~~-d~~g~T~Lh~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~  179 (276)
T 4hbd_A          104 VNIA-DSNGNTALHYSVSHANFPVVQQLLDS--GVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKA  179 (276)
T ss_dssp             HTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--SCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCC
T ss_pred             CcCC-CCCCCCHHHHHHHCCCHHHHHHHHHC--CCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-ccc
Confidence            4554 66666666666666666666666666  44 56666666666666666     446666666666666543 555


Q ss_pred             CCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHH
Q 037666           88 GGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLAR  166 (375)
Q Consensus        88 d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~  166 (375)
                      |..|.||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..|+.++++.|++..|.+++.+|.+|+||||+|++
T Consensus       180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~  259 (276)
T 4hbd_A          180 SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALD  259 (276)
T ss_dssp             TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH
Confidence            6666666666666666666666666666 566666666666666666666666666664466666666666666666666


Q ss_pred             hcCC
Q 037666          167 KNLT  170 (375)
Q Consensus       167 ~~~~  170 (375)
                      .++.
T Consensus       260 ~g~~  263 (276)
T 4hbd_A          260 AGQS  263 (276)
T ss_dssp             HTCH
T ss_pred             cCCH
Confidence            6655

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.96  E-value=1.2e-29  Score=213.33  Aligned_cols=154  Identities=23%  Similarity=0.199  Sum_probs=145.1

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      ...+.||||.|++.|+.+++++|+++  +.+++.+|.+|+||||+|+..|+.+++++|++.+.++ +.+|.+|.||||+|
T Consensus        11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A   87 (169)
T 2y1l_E           11 GSDLGKKLLEAARAGRDDEVRILMAN--GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLA   87 (169)
T ss_dssp             --CHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred             CCcccchHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHH
Confidence            55678999999999999999999999  8999999999999999999999999999999999986 88999999999999


Q ss_pred             HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCcc
Q 037666           99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPC  177 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~  177 (375)
                      +..|+.+++++|++.+. .+.+|.+|+||||+|+..++.+++++|+++ +.+++.+|.+|+||||+|++.++.       
T Consensus        88 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~-------  159 (169)
T 2y1l_E           88 ALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQDKFGKTAFDISIDNGNE-------  159 (169)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------
T ss_pred             HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhCCH-------
Confidence            99999999999999998 888999999999999999999999999998 999999999999999999999977       


Q ss_pred             chhhcc
Q 037666          178 GVENVV  183 (375)
Q Consensus       178 ~v~~~L  183 (375)
                      ++.++|
T Consensus       160 ~~~~~L  165 (169)
T 2y1l_E          160 DLAEIL  165 (169)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777766

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.96  E-value=5.7e-30  Score=230.11  Aligned_cols=170  Identities=21%  Similarity=0.135  Sum_probs=148.4

Q ss_pred             HHHHHhhCcccccccc---CCCCCcHHHHHH---HcCCHHHHHHHHHcCChhh-----------HhchhcCCChHHHHHH
Q 037666            3 AKDIYDKYEDEIGQEI---TNLGNTALHVAA---QANCIDFVKELLKMMSTED-----------LAKKNKIGCTAFFYAA   65 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~---d~~g~tpLh~A~---~~g~~~~v~~Ll~~~~~~~-----------~~~~d~~g~tpLh~Aa   65 (375)
                      +.++|.++|.+++...   |.+|+||||+|+   ..|+.+++++|++.  +++           .+..|..|+||||+|+
T Consensus        24 ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~--g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~  101 (260)
T 3jxi_A           24 LLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDI--AEKTGNMREFINSPFRDVYYRGQTALHIAI  101 (260)
T ss_dssp             HHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHH--HHHTTCHHHHHTCCBCCSSEESBCHHHHHH
T ss_pred             HHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHh--cccccchHhhhcccccccccCCCCHHHHHH
Confidence            3455557888888651   377999999999   67999999999998  654           2334558999999999


Q ss_pred             HcCcHHHHHHHHccCCCCccccC--------------CCCChHHHHHHHcCcHHHHHHHHH---hcc-CCcccchhhHHH
Q 037666           66 GSGMVEIVEEAMKGNKDIAMVPG--------------GDGTLPIVRAAALGQRQTVVLLYE---KTK-GSLTDDECIELL  127 (375)
Q Consensus        66 ~~g~~~iv~~Ll~~~~~~~~~~d--------------~~g~tpLh~Aa~~g~~~iv~~Ll~---~~~-~~~~d~~g~t~L  127 (375)
                      ..|+.+++++|++.++++ +.+|              ..|.||||+|+..|+.+++++|++   .+. ++.+|.+|+|||
T Consensus       102 ~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpL  180 (260)
T 3jxi_A          102 ERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVL  180 (260)
T ss_dssp             HTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred             HcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHH
Confidence            999999999999999996 7777              689999999999999999999999   777 888999999999


Q ss_pred             HHHHhcCc---------HHHHHHHHhcCCccc-------ccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          128 VKLIETDL---------YAVALRLLKDRPQLA-------TKRDRNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       128 h~A~~~~~---------~~~v~~LL~~~~~~~-------~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      |+|+..++         .++++.|+++ |.++       +.+|.+|+||||+|++.|+.       +++++|
T Consensus       181 h~A~~~~~~~~~~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~-------~~v~~L  244 (260)
T 3jxi_A          181 HALVAIADNTRENTKFVTKMYDLLLIK-CAKLFPDTNLEALLNNDGLSPLMMAAKTGKI-------GIFQHI  244 (260)
T ss_dssp             HHHHHHCCSSHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH-------HHHHHH
T ss_pred             HHHHHhccCchhHHHHHHHHHHHHHHh-CcccccccchhhcccCCCCCHHHHHHHcCCH-------HHHHHH
Confidence            99998777         6899999988 7777       78999999999999999988       888877

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.96  E-value=1.1e-29  Score=209.75  Aligned_cols=150  Identities=17%  Similarity=0.111  Sum_probs=140.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHc
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAAL  101 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~  101 (375)
                      ..||||.|++.|+.+++++|++.  +.+++ .|..|.||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..
T Consensus         2 ~~~~L~~A~~~g~~~~v~~Ll~~--g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~   77 (153)
T 1awc_B            2 LGKKLLEAARAGQDDEVRILMAN--GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE   77 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHH--TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred             ccHHHHHHHHcCCHHHHHHHHHc--CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence            46899999999999999999999  66665 5889999999999999999999999999986 88999999999999999


Q ss_pred             CcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchh
Q 037666          102 GQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVE  180 (375)
Q Consensus       102 g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~  180 (375)
                      |+.+++++|+++++ ++.+|.+|+||||+|+.+|+.+++++|+++ |.+++.+|.+|+||||+|++.++.       ++.
T Consensus        78 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~-------~i~  149 (153)
T 1awc_B           78 GHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY-GADVHTQSKFCKTAFDISIDNGNE-------DLA  149 (153)
T ss_dssp             TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHH
T ss_pred             ChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCH-------HHH
Confidence            99999999999998 888999999999999999999999999998 999999999999999999999977       777


Q ss_pred             hcc
Q 037666          181 NVV  183 (375)
Q Consensus       181 ~~L  183 (375)
                      ++|
T Consensus       150 ~~L  152 (153)
T 1awc_B          150 EIL  152 (153)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            654

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.96  E-value=3.4e-30  Score=231.58  Aligned_cols=186  Identities=15%  Similarity=0.068  Sum_probs=153.4

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHH----cCChhhHhchh----cCCChHHHHHH---HcCcHHHHHHHHccCCCC----
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLK----MMSTEDLAKKN----KIGCTAFFYAA---GSGMVEIVEEAMKGNKDI----   83 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~----~~~~~~~~~~d----~~g~tpLh~Aa---~~g~~~iv~~Ll~~~~~~----   83 (375)
                      +..|+||||.|++.|+.+.++.|++    .  +.+++..+    .+|+||||+|+   +.|+.+++++|++.+.+.    
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~--~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~   79 (260)
T 3jxi_A            2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTH--KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR   79 (260)
T ss_dssp             CCCCHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH
T ss_pred             ccchHHHHHHHHHhCCHHHHHHHHHHHHhc--CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH
Confidence            5679999999999999996665555    6  67777666    67999999999   789999999999986431    


Q ss_pred             ------ccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCccc--------------chhhHHHHHHHhcCcHHHHHHH
Q 037666           84 ------AMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTD--------------DECIELLVKLIETDLYAVALRL  142 (375)
Q Consensus        84 ------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d--------------~~g~t~Lh~A~~~~~~~~v~~L  142 (375)
                            ...+|.+|+||||+|+..|+.+++++|++.++ ++.+|              ..|+||||+|+..|+.+++++|
T Consensus        80 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L  159 (260)
T 3jxi_A           80 EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL  159 (260)
T ss_dssp             HHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred             hhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence                  13445689999999999999999999999998 77777              5799999999999999999999


Q ss_pred             Hhc--CCcccccccCCCCcHHHHHHHhcCCCCC--CCccchhhcc--chhhH-------hhhcCCCCChhhhhHHHH
Q 037666          143 LKD--RPQLATKRDRNEETALHVLARKNLTSSN--QNPCGVENVV--PKKLA-------EAINTGGLTPTALFSEKH  206 (375)
Q Consensus       143 L~~--~~~~~~~~d~~G~T~Lh~A~~~~~~~~~--~~~~~v~~~L--~~~~~-------~~~n~~g~tpl~~a~~~~  206 (375)
                      ++.  .|.+++.+|.+|+||||+|++.+.....  +...++.++|  .++++       +.+|.+|+||+++|.+..
T Consensus       160 l~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g  236 (260)
T 3jxi_A          160 TENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG  236 (260)
T ss_dssp             HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred             HhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcC
Confidence            993  4999999999999999999987752100  0001455555  66777       679999999999998764

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.96  E-value=2.7e-29  Score=222.03  Aligned_cols=179  Identities=16%  Similarity=0.096  Sum_probs=164.2

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      |..|.||||.|+..|+.+++++|++.  +.+++.+|..|.||||+|+..|+.+++++|++.+++.....+..|.||||+|
T Consensus         6 d~~~~~~l~~A~~~g~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A   83 (240)
T 3eu9_A            6 DDYSTWDIVKATQYGIYERCRELVEA--GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA   83 (240)
T ss_dssp             SCGGGCCHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH
T ss_pred             ccccchHHHHHHHcCChHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH
Confidence            88899999999999999999999999  8899999999999999999999999999999999987666667799999999


Q ss_pred             HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCcc
Q 037666           99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPC  177 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~  177 (375)
                      +..|+.+++++|++.+. .+.+|..|.||||.|+..++.+++++|+++ +.+++.+|.+|.||||+|+..+...      
T Consensus        84 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~------  156 (240)
T 3eu9_A           84 TRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMDQNGMTPLMWAAYRTHSV------  156 (240)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCSS------
T ss_pred             HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccCCCCCcHHHHHHHhCChH------
Confidence            99999999999999998 888899999999999999999999999998 8999999999999999999877532      


Q ss_pred             chhhcc--chhhHhhhcC-CCCChhhhhHHHH
Q 037666          178 GVENVV--PKKLAEAINT-GGLTPTALFSEKH  206 (375)
Q Consensus       178 ~v~~~L--~~~~~~~~n~-~g~tpl~~a~~~~  206 (375)
                      ++.++|  .+.+++..+. .|.||+++|....
T Consensus       157 ~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~  188 (240)
T 3eu9_A          157 DPTRLLLTFNVSVNLGDKYHKNTALHWAVLAG  188 (240)
T ss_dssp             TTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHT
T ss_pred             HHHHHHHhcCCCcchhhccCCCcHHHHHHHcC
Confidence            677776  6778888887 8999999988654

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.96  E-value=6.8e-30  Score=212.81  Aligned_cols=153  Identities=20%  Similarity=0.124  Sum_probs=142.3

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHH
Q 037666           20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAA   99 (375)
Q Consensus        20 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa   99 (375)
                      +...||||.|+..|+.+++++|+++  +.+++.+|..|+||||+|+. |+.+++++|++.++++ +.+|..|.||||+|+
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~   78 (162)
T 1ihb_A            3 EPWGNELASAAARGDLEQLTSLLQN--NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAA   78 (162)
T ss_dssp             --CHHHHHHHHHHTCHHHHHHHTTS--CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred             chHhhHHHHHHHcCCHHHHHHHHhC--CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence            4578999999999999999999998  88999999999999999999 9999999999999986 889999999999999


Q ss_pred             HcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccc
Q 037666          100 ALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCG  178 (375)
Q Consensus       100 ~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~  178 (375)
                      ..|+.+++++|++.+. ++.+|.+|+||||+|++.|+.+++++|+++....++.+|.+|+||||+|++.++.       +
T Consensus        79 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~-------~  151 (162)
T 1ihb_A           79 RAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRN-------E  151 (162)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCH-------H
T ss_pred             HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCH-------H
Confidence            9999999999999998 8889999999999999999999999999994444799999999999999999987       7


Q ss_pred             hhhcc
Q 037666          179 VENVV  183 (375)
Q Consensus       179 v~~~L  183 (375)
                      +.++|
T Consensus       152 ~~~~L  156 (162)
T 1ihb_A          152 VVSLM  156 (162)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88776

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.96  E-value=7.1e-30  Score=216.66  Aligned_cols=166  Identities=15%  Similarity=0.066  Sum_probs=148.6

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      ++++.+|||.|+..|+.+++++|++.. +.+++..|..|+||||+|+..|+.+++++|++.+.++ +.+|.+|.||||+|
T Consensus         2 ~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A   79 (179)
T 3f6q_A            2 SPEFMDDIFTQCREGNAVAVRLWLDNT-ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLA   79 (179)
T ss_dssp             -----CCHHHHHHHTCHHHHHHHHHCT-TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred             CHHHHHHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence            356889999999999999999999996 7789999999999999999999999999999999996 88999999999999


Q ss_pred             HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCcc
Q 037666           99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPC  177 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~  177 (375)
                      +..|+.+++++|++.++ ++.+|.+|+||||+|+..++.++++.|+++ |.+++.+|.+|+||||+|+..+..       
T Consensus        80 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~-------  151 (179)
T 3f6q_A           80 ASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN-GALVSICNKYGEMPVDKAKAPLRE-------  151 (179)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSSBCCTTSCCGGGGSCHHHHH-------
T ss_pred             HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcchhccCCCCcHHHHHHHHHH-------
Confidence            99999999999999998 888999999999999999999999999998 999999999999999999998877       


Q ss_pred             chhhcc--chhhHhhhcCC
Q 037666          178 GVENVV--PKKLAEAINTG  194 (375)
Q Consensus       178 ~v~~~L--~~~~~~~~n~~  194 (375)
                      ++.++|  .+++++..+.+
T Consensus       152 ~~~~~L~~~g~~~~~~~~~  170 (179)
T 3f6q_A          152 LLRERAEKMGQNLNRIPYK  170 (179)
T ss_dssp             HHHHHHHHTTCCCSCBCCC
T ss_pred             HHHHHHHHhhcCcccCCcc
Confidence            777777  45555544433

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.96  E-value=3.4e-29  Score=237.39  Aligned_cols=173  Identities=15%  Similarity=0.138  Sum_probs=159.9

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCh---hhHhchhcCCChHHHHHHHcC---cHHHHHH
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMST---EDLAKKNKIGCTAFFYAAGSG---MVEIVEE   75 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~---~~~~~~d~~g~tpLh~Aa~~g---~~~iv~~   75 (375)
                      +++++|.++|++++.. |.+|.||||+|+..|+.+++++|+++  +   .+++..|..|.||||+|+..|   +.+++++
T Consensus       180 ~iv~~Ll~~ga~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~  256 (373)
T 2fo1_E          180 RLVAYLMKAGADPTIY-NKSERSALHQAAANRDFGMMVYMLNS--TKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKL  256 (373)
T ss_dssp             HHHHHHHHTTCCSCCC-CTTCCCHHHHHHHTTCHHHHHHHTTS--HHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHH
T ss_pred             HHHHHHHHCCCCCccc-CCCCCCHHHHHHHCCCHHHHHHHHhc--CccccChhhcCCCCCCHHHHHHHhCCcchHHHHHH
Confidence            5788999999999987 99999999999999999999999998  6   688999999999999999998   8999999


Q ss_pred             HHccCCCCcc-------ccCCCCChHHHHHHHcCcHHHHHHHHHhc-c-CCcccchhhHHHHHHHhcCcHHHHHHHHhcC
Q 037666           76 AMKGNKDIAM-------VPGGDGTLPIVRAAALGQRQTVVLLYEKT-K-GSLTDDECIELLVKLIETDLYAVALRLLKDR  146 (375)
Q Consensus        76 Ll~~~~~~~~-------~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~-~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~  146 (375)
                      |++.++++..       .+|..|.||||+|+..|+.+++++|++.+ . ++.+|.+|+||||+|+.+|+.+++++|+++ 
T Consensus       257 Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-  335 (373)
T 2fo1_E          257 LVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ-  335 (373)
T ss_dssp             HHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-
T ss_pred             HHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc-
Confidence            9999988621       26779999999999999999999999987 4 888999999999999999999999999998 


Q ss_pred             CcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccch
Q 037666          147 PQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPK  185 (375)
Q Consensus       147 ~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~  185 (375)
                      |.+++.+|.+|+||||+|+.+++.       +++++|..
T Consensus       336 gad~~~~d~~g~t~l~~A~~~g~~-------~iv~~Ll~  367 (373)
T 2fo1_E          336 GASVEAVDATDHTARQLAQANNHH-------NIVDIFDR  367 (373)
T ss_dssp             TCCSSCCCSSSCCHHHHHHHTTCH-------HHHHHHHT
T ss_pred             CCCccCCCCCCCCHHHHHHHcCCH-------HHHHHHHh
Confidence            999999999999999999999988       88888843

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.96  E-value=1.1e-29  Score=212.46  Aligned_cols=155  Identities=21%  Similarity=0.269  Sum_probs=143.5

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      |.+|.||||.|++.|+.++++.|++.. +.+++..|..|+||||+|+..|+.+++++|++.+.++ +.+|.+|.||||+|
T Consensus         5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A   82 (165)
T 3twr_A            5 NSEADRQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNA   82 (165)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHH
Confidence            678999999999999999999999975 6778888999999999999999999999999999996 88999999999999


Q ss_pred             HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCcc
Q 037666           99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPC  177 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~  177 (375)
                      +..|+.+++++|++.+. ++.+|..|+||||+|+..|+.+++++|+++ |.+++.+|.+|+||||+|++ ++.       
T Consensus        83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~a~~-~~~-------  153 (165)
T 3twr_A           83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH-GADPTKKNRDGNTPLDLVKD-GDT-------  153 (165)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTGGGSCT-TCH-------
T ss_pred             HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCChhHhHhc-CCh-------
Confidence            99999999999999998 888999999999999999999999999998 99999999999999999776 555       


Q ss_pred             chhhccc
Q 037666          178 GVENVVP  184 (375)
Q Consensus       178 ~v~~~L~  184 (375)
                      ++.++|.
T Consensus       154 ~i~~~L~  160 (165)
T 3twr_A          154 DIQDLLR  160 (165)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            7777763

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.96  E-value=3.9e-29  Score=206.98  Aligned_cols=150  Identities=21%  Similarity=0.173  Sum_probs=141.2

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHc
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAAL  101 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~  101 (375)
                      |.||||.|+..|+.+++++|++.. +.+++..|..|+||||+ +..|+.++++.|++.++++ +.+|.+|.||||+|+..
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~   78 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRE-LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAART   78 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTT-CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhh-CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHc
Confidence            579999999999999999999994 67899999999999999 9999999999999999996 88999999999999999


Q ss_pred             CcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchh
Q 037666          102 GQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVE  180 (375)
Q Consensus       102 g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~  180 (375)
                      |+.+++++|++.+. ++.+|.+|+||||+|+..|+.+++++|++.  .+++.+|.+|+||||+|++.++.       ++.
T Consensus        79 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~~-------~~v  149 (156)
T 1bd8_A           79 GFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGAQ-------DLV  149 (156)
T ss_dssp             TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCCH-------HHH
T ss_pred             CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCcH-------HHH
Confidence            99999999999998 888999999999999999999999999987  88999999999999999999977       777


Q ss_pred             hcc
Q 037666          181 NVV  183 (375)
Q Consensus       181 ~~L  183 (375)
                      ++|
T Consensus       150 ~~L  152 (156)
T 1bd8_A          150 DIL  152 (156)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            765

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.96  E-value=1.6e-30  Score=229.82  Aligned_cols=189  Identities=15%  Similarity=-0.001  Sum_probs=158.1

Q ss_pred             HHHhhCccccccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666            5 DIYDKYEDEIGQE--ITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus         5 ~lL~~~~~~~~~~--~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      +.|+++|.+.+..  .+.+|.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..|+.+++++|++.+++
T Consensus         2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~   79 (229)
T 2vge_A            2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKE--MNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN   79 (229)
T ss_dssp             --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence            3455567766533  255677899999999999999999999  889999999999999999999999999999999999


Q ss_pred             CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCccc-chhhHHHHHH--HhcCcHHHHHHHHhcCCcccccccCCCC
Q 037666           83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTD-DECIELLVKL--IETDLYAVALRLLKDRPQLATKRDRNEE  158 (375)
Q Consensus        83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d-~~g~t~Lh~A--~~~~~~~~v~~LL~~~~~~~~~~d~~G~  158 (375)
                      + +.+|.+|.||||+|+..|+.+++++|++.++ ++..+ .+|+||||+|  +..++.+++++|++. |.+++.+|..|.
T Consensus        80 ~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~-ga~~~~~~~~~~  157 (229)
T 2vge_A           80 V-NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV-EQSMGLMNSGAV  157 (229)
T ss_dssp             T-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH-HHHTTTSGGGEE
T ss_pred             C-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc-CCCcccccCCch
Confidence            6 8899999999999999999999999999998 77765 6999999999  999999999999998 999999999999


Q ss_pred             cHHHHHHHhcCCCCCCCccchhhcc-chhh--HhhhcCCCCChhhhhHHHH
Q 037666          159 TALHVLARKNLTSSNQNPCGVENVV-PKKL--AEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       159 T~Lh~A~~~~~~~~~~~~~~v~~~L-~~~~--~~~~n~~g~tpl~~a~~~~  206 (375)
                      ||+|.++....         ...++ .+++  ++.+|.+|+||+++|+...
T Consensus       158 ~~l~~~~~~~~---------~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g  199 (229)
T 2vge_A          158 YALWDYSAEFG---------DELSFREGESVTVLRRDGPEETDWWWAALHG  199 (229)
T ss_dssp             EESSCBCCSST---------TBCCBCTTCEEEEEESSCTTCSSEEEEEETT
T ss_pred             HHHHHHhhccc---------cccCccccccccccccCCCcccHHHHHHHcC
Confidence            99996554431         11222 4555  6788999999999987654

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.96  E-value=2.8e-28  Score=227.55  Aligned_cols=184  Identities=17%  Similarity=0.153  Sum_probs=158.2

Q ss_pred             HhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhc----------hhcCCChHHHHHHHcCcHHHHHHH
Q 037666            7 YDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAK----------KNKIGCTAFFYAAGSGMVEIVEEA   76 (375)
Q Consensus         7 L~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~----------~d~~g~tpLh~Aa~~g~~~iv~~L   76 (375)
                      +...+.+++.. |..|.||||+|+..|+.+++++|+++  +++++.          .+..|.||||+|++.|+.+++++|
T Consensus       111 ~~~~~~~~~~~-d~~g~t~l~~A~~~~~~~~~~~ll~~--ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~L  187 (337)
T 4g8k_A          111 FLSKGADVNEC-DFYGFTAFMEAAVYGKVKALKFLYKR--GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL  187 (337)
T ss_dssp             HHTTTCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHH
T ss_pred             hhhccchhhhh-ccCCCCHHHHHHHcCcHHHHHHHHHc--CCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHH
Confidence            33444556665 88999999999999999999999998  665543          456799999999999999999999


Q ss_pred             Hc-cCCCCccccCCCCChHHHHHHHcCc----HHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCccc
Q 037666           77 MK-GNKDIAMVPGGDGTLPIVRAAALGQ----RQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLA  150 (375)
Q Consensus        77 l~-~~~~~~~~~d~~g~tpLh~Aa~~g~----~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~  150 (375)
                      ++ .+.++ +.+|..|.||+|.++..++    .+++++|+++++ ++.+|.+|+||||+|+..|+.++++.|+...+.++
T Consensus       188 L~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~v  266 (337)
T 4g8k_A          188 LDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI  266 (337)
T ss_dssp             HHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCT
T ss_pred             HhccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcc
Confidence            96 47775 8899999999999887554    468899999998 89999999999999999999999999999889999


Q ss_pred             ccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          151 TKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       151 ~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      |.+|.+|+||||+|++.|+.       +++++|  .|++++     +++|+++|.+..
T Consensus       267 n~~d~~G~TpL~~A~~~g~~-------~iv~~Ll~~GAd~n-----~~~~L~~A~~~~  312 (337)
T 4g8k_A          267 NDTDSDGKTALLLAVELKLK-------KIAELLCKRGASTD-----CGDLVMTARRNY  312 (337)
T ss_dssp             TCBCTTSCBHHHHHHHTTCH-------HHHHHHHTTSCSST-----TCCHHHHHHHTT
T ss_pred             cCcCCCCCCHHHHHHHcCCH-------HHHHHHHHCCCCCC-----CCCHHHHHHHcC
Confidence            99999999999999999988       888887  555544     567999987653

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.95  E-value=4.8e-29  Score=226.57  Aligned_cols=180  Identities=13%  Similarity=0.110  Sum_probs=162.2

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHH
Q 037666           20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAA   99 (375)
Q Consensus        20 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa   99 (375)
                      ..+++++|.|+..|+.+.++.+++...+..+|.+|.+|+||||+|+..|+.+++++|++.++...+.+|..|.||||+|+
T Consensus        74 ~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~  153 (276)
T 4hbd_A           74 LACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTA  153 (276)
T ss_dssp             HHHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGG
T ss_pred             HHhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHH
Confidence            34678899999999999999999883122399999999999999999999999999999998334889999999999999


Q ss_pred             -----HcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCC
Q 037666          100 -----ALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSN  173 (375)
Q Consensus       100 -----~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~  173 (375)
                           ..++.+++++|++.+. .+..|..|+||||+|+.+|+.++++.|++. |.++|.+|.+|+||||+|+..++.   
T Consensus       154 ~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-gad~n~~d~~G~TpLh~A~~~g~~---  229 (276)
T 4hbd_A          154 LATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLAC-EADVNVQDDDGSTALMCACEHGHK---  229 (276)
T ss_dssp             GCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCH---
T ss_pred             HHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCH---
Confidence                 6789999999999998 777888999999999999999999999998 999999999999999999999988   


Q ss_pred             CCccchhhcc---chhhHhhhcCCCCChhhhhHHHHH
Q 037666          174 QNPCGVENVV---PKKLAEAINTGGLTPTALFSEKHK  207 (375)
Q Consensus       174 ~~~~~v~~~L---~~~~~~~~n~~g~tpl~~a~~~~~  207 (375)
                          +++++|   .+++++.+|.+|+||+++|.+..+
T Consensus       230 ----~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~  262 (276)
T 4hbd_A          230 ----EIAGLLLAVPSCDISLTDRDGSTALMVALDAGQ  262 (276)
T ss_dssp             ----HHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             ----HHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCC
Confidence                787776   578899999999999999987643

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.95  E-value=2.2e-28  Score=205.87  Aligned_cols=153  Identities=17%  Similarity=0.097  Sum_probs=135.2

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      ++.++...+.+++.. |..|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.+.+
T Consensus        18 v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~   94 (172)
T 3v30_A           18 LKEHLRKGDNLVNKP-DERGFTPLIWASAFGEIETVRFLLEW--GADPHILAKERESALSLASTGGYTDIVGLLLERDVD   94 (172)
T ss_dssp             HHHHHTTCSGGGGCC-CTTSCCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred             HHHHHHcCcccccCC-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            455555555557776 99999999999999999999999999  899999999999999999999999999999999999


Q ss_pred             CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      + +.+|.+|.||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..++.++++.|+++ +.+...++..|.||
T Consensus        95 ~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~-~~~~~~~~~~~~~p  171 (172)
T 3v30_A           95 I-NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH-ILKLFQSNLVPADP  171 (172)
T ss_dssp             T-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH-HHHHSCC-------
T ss_pred             C-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH-HHHHhcccCCCCCC
Confidence            6 8899999999999999999999999999998 888999999999999999999999999998 88888888888887

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.95  E-value=2.2e-28  Score=217.42  Aligned_cols=175  Identities=12%  Similarity=0.075  Sum_probs=124.1

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      +..|.||||.|++.|+.+.++.|+++  +.+++.. ..|.||||+|+..|+.++++.|++.++++ +.+|.+|.||||+|
T Consensus         2 ~~~g~t~L~~a~~~~~~~~~~~ll~~--g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A   77 (239)
T 1ycs_B            2 EITGQVSLPPGKRTNLRKTGSERIAH--GMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNA   77 (239)
T ss_dssp             --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHH
T ss_pred             CccccccCchhhhhhhHHHHHHHhcc--CCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence            35699999999999999999999999  8888854 78999999999999999999999999986 88999999999999


Q ss_pred             HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCC-cHHHHH--HHhcCCCCCC
Q 037666           99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEE-TALHVL--ARKNLTSSNQ  174 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~-T~Lh~A--~~~~~~~~~~  174 (375)
                      +..|+.+++++|+++++ ++.+|.+|+||||+|+..|+.++++.|+++ |.+++.+|.+|. ||||+|  +..++.    
T Consensus        78 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~t~l~~a~~~~~g~~----  152 (239)
T 1ycs_B           78 VCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVES-GAAVFAMTYSDMQTAADKCEEMEEGYT----  152 (239)
T ss_dssp             HHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHCCSSSTTCC----
T ss_pred             HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcceecCCCCcchHHHHHHhhhccH----
Confidence            99999999999999998 888999999999999999999999999998 999999998887 999999  666766    


Q ss_pred             Cccchhhcc--chhhHhhh---------cCCCCChhhhhHHH
Q 037666          175 NPCGVENVV--PKKLAEAI---------NTGGLTPTALFSEK  205 (375)
Q Consensus       175 ~~~~v~~~L--~~~~~~~~---------n~~g~tpl~~a~~~  205 (375)
                         ++.++|  .+++.+..         +..+.++.+++.+.
T Consensus       153 ---~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~  191 (239)
T 1ycs_B          153 ---QCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKE  191 (239)
T ss_dssp             ---CHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCS
T ss_pred             ---HHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccC
Confidence               788877  55666655         44567777766443

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.95  E-value=5.5e-27  Score=196.95  Aligned_cols=140  Identities=26%  Similarity=0.233  Sum_probs=133.3

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      +++++|.++|.+++.. |.+|.||||+|+..|+.+++++|+++  +.+++..|..|+||||+|+..|+.+++++|++.++
T Consensus        28 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~  104 (169)
T 2y1l_E           28 DEVRILMANGADVNAE-DASGWTPLHLAAFNGHLEIVEVLLKN--GADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGA  104 (169)
T ss_dssp             HHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            4678888899999987 99999999999999999999999999  89999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      ++ +.+|.+|.||||+|+..|+.+++++|++++. .+.+|..|+||||+|+.+++.+++++|++.
T Consensus       105 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~  168 (169)
T 2y1l_E          105 DV-NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL  168 (169)
T ss_dssp             CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred             CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence            96 8899999999999999999999999999998 888999999999999999999999999875

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.95  E-value=2.6e-27  Score=197.13  Aligned_cols=141  Identities=16%  Similarity=0.168  Sum_probs=132.3

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.+.|.++|.+++.. |..|+||||+|+. |+.+++++|+++  +.+++.+|..|+||||+|++.|+.+++++|++.++
T Consensus        19 ~~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~   94 (162)
T 1ihb_A           19 EQLTSLLQNNVNVNAQ-NGFGRTALQVMKL-GNPEIARRLLLR--GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQA   94 (162)
T ss_dssp             HHHHHHTTSCCCTTCC-CTTSCCHHHHCCS-SCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             HHHHHHHhCCCCcccc-CccCccHHHHHHc-CcHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            4567788899999987 9999999999999 999999999999  89999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc--CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK--GSLTDDECIELLVKLIETDLYAVALRLLKDRPQ  148 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~--~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~  148 (375)
                      ++ +.+|.+|.||||+|+..|+.+++++|++.++  .+.+|..|+||||+|+..|+.+++++|+++ |+
T Consensus        95 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-GA  161 (162)
T 1ihb_A           95 DV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN-GA  161 (162)
T ss_dssp             CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-C-
T ss_pred             CC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh-CC
Confidence            96 8899999999999999999999999999998  478999999999999999999999999987 54

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.94  E-value=9.9e-28  Score=198.84  Aligned_cols=141  Identities=16%  Similarity=0.030  Sum_probs=118.4

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCCh-HHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTL-PIVR   97 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t-pLh~   97 (375)
                      +..|.||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+ .|+.+++++|++.+.++ +.+|..|.| |||+
T Consensus         9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~   84 (156)
T 1bi7_B            9 MEPSADWLATAAARGRVEEVRALLEA--GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHD   84 (156)
T ss_dssp             -CCSTTHHHHHHHHTCHHHHHHHHTT--TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHH
T ss_pred             CccchHHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHH
Confidence            77899999999999999999999999  8999999999999999985 99999999999999996 889999999 9999


Q ss_pred             HHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHH
Q 037666           98 AAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVL  164 (375)
Q Consensus        98 Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A  164 (375)
                      |+..|+.+++++|+++++ ++.+|.+|+||||+|+..|+.+++++|+++ |.+++.+|..|.||.+-+
T Consensus        85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~~~~~  151 (156)
T 1bi7_B           85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA-AGGTRGSNHARIDAAEGP  151 (156)
T ss_dssp             HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC-C-----------------
T ss_pred             HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHc-CCCCCccCcCcCcccccC
Confidence            999999999999999998 888999999999999999999999999988 999999999999998744

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.94  E-value=2.9e-27  Score=202.68  Aligned_cols=151  Identities=15%  Similarity=0.049  Sum_probs=140.8

Q ss_pred             hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhH
Q 037666           47 TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIE  125 (375)
Q Consensus        47 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t  125 (375)
                      +..++.+|..|+||||+|+..|+.++++.|++.++++ +.+|.+|.||||+|+..|+.+++++|++.++ ++.+|..|+|
T Consensus        25 ~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  103 (192)
T 2rfm_A           25 DFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT  103 (192)
T ss_dssp             HHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred             HHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Confidence            3457889999999999999999999999999999886 8889999999999999999999999999998 8889999999


Q ss_pred             HHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhH
Q 037666          126 LLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFS  203 (375)
Q Consensus       126 ~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~  203 (375)
                      |||+|+..++.+++++|++. +.+++.+|.+|+||||+|+..++.       ++.++|  .+++++.+|..|.||+++|.
T Consensus       104 ~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~t~l~~A~  175 (192)
T 2rfm_A          104 PLMWSIIFGYSEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRS-------EIVKKLLELGADISARDLTGLTAEASAR  175 (192)
T ss_dssp             HHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCH-------HHHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCH-------HHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence            99999999999999999998 999999999999999999999988       788877  67889999999999999987


Q ss_pred             HHH
Q 037666          204 EKH  206 (375)
Q Consensus       204 ~~~  206 (375)
                      ...
T Consensus       176 ~~~  178 (192)
T 2rfm_A          176 IFG  178 (192)
T ss_dssp             HTT
T ss_pred             HhC
Confidence            654

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.94  E-value=3e-27  Score=200.43  Aligned_cols=150  Identities=20%  Similarity=0.144  Sum_probs=139.6

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      ++.+|...+.+++.. |..|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.+++
T Consensus        21 v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~   97 (179)
T 3f6q_A           21 VRLWLDNTENDLNQG-DDHGFSPLHWACREGRSAVVEMLIMR--GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD   97 (179)
T ss_dssp             HHHHHHCTTSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             HHHHHhcCccccccc-CCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            455666668889887 99999999999999999999999999  899999999999999999999999999999999999


Q ss_pred             CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCC
Q 037666           83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNE  157 (375)
Q Consensus        83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G  157 (375)
                      + +.+|.+|.||||+|+..|+.+++++|+++++ ++.+|.+|+||||+|+..++.++++.|++. +.+++..+.++
T Consensus        98 ~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~-g~~~~~~~~~~  171 (179)
T 3f6q_A           98 I-NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKM-GQNLNRIPYKD  171 (179)
T ss_dssp             T-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHT-TCCCSCBCCCC
T ss_pred             C-CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHh-hcCcccCCccc
Confidence            6 8899999999999999999999999999999 889999999999999999999999999988 88888777665

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.94  E-value=2.7e-27  Score=191.57  Aligned_cols=130  Identities=18%  Similarity=0.088  Sum_probs=123.9

Q ss_pred             ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCC
Q 037666           11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGD   90 (375)
Q Consensus        11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~   90 (375)
                      +.+++.. |..|.||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+. |+.+++++|++.++++ +.+|..
T Consensus         2 ~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~   76 (136)
T 1d9s_A            2 SPGIHML-GGSSDAGLATAAARGQVETVRQLLEA--GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPA   76 (136)
T ss_dssp             CCCCSCC-CCCCSCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTT
T ss_pred             CCCccCC-CCCCccHHHHHHHcCCHHHHHHHHHc--CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCC
Confidence            4577887 89999999999999999999999999  89999999999999999999 9999999999999996 888999


Q ss_pred             -CChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           91 -GTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        91 -g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                       |.||||+|+..|+.+++++|++.++ ++.+|..|+||||+|+.+++.+++++|+++
T Consensus        77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~  133 (136)
T 1d9s_A           77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA  133 (136)
T ss_dssp             TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence             9999999999999999999999998 888999999999999999999999999987

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.94  E-value=1.4e-28  Score=218.63  Aligned_cols=187  Identities=16%  Similarity=0.103  Sum_probs=145.6

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.+.|+++|++++.  ++.|.||||.|+..|+.++++.|++.  +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus        19 ~~~~~ll~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga   94 (239)
T 1ycs_B           19 KTGSERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYE--VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGV   94 (239)
T ss_dssp             --------------------CHHHHHHHHHHTCHHHHHHHTST--TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred             HHHHHHhccCCCccc--CchhhHHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            356778889999985  57899999999999999999999999  78999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhh-HHHHHH--HhcCcHHHHHHHHhcCCcccccc----
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECI-ELLVKL--IETDLYAVALRLLKDRPQLATKR----  153 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~-t~Lh~A--~~~~~~~~v~~LL~~~~~~~~~~----  153 (375)
                      ++ +.+|.+|+||||+|+..|+.+++++|+++++ ++..+..|. ||||+|  +.+|+.++++.|++. +.+++..    
T Consensus        95 ~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~-~a~~~~~~~~~  172 (239)
T 1ycs_B           95 NV-NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV-QEKMGIMNKGV  172 (239)
T ss_dssp             CT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH-HHHTTTTGGGE
T ss_pred             CC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh-hhcccccccce
Confidence            96 8899999999999999999999999999999 777777766 999999  788999999999988 6666554    


Q ss_pred             -----cCCCCcHHHHHHHhcCCCCCCCccchhhccchhh--------HhhhcCCCCChhhhhH
Q 037666          154 -----DRNEETALHVLARKNLTSSNQNPCGVENVVPKKL--------AEAINTGGLTPTALFS  203 (375)
Q Consensus       154 -----d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~~~--------~~~~n~~g~tpl~~a~  203 (375)
                           |..|.++++++.+.|         ++.+++...+        ....++.|.+|.++..
T Consensus       173 ~~al~d~~~~~~~eLa~~~G---------~~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~  226 (239)
T 1ycs_B          173 IYALWDYEPQNDDELPMKEG---------DCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLG  226 (239)
T ss_dssp             EEESSCBCCSSTTBCCBCSS---------CEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEE
T ss_pred             EEEEeccCCCCCCcccccCC---------CEEEEEEecCCCCCCEEEEEECCcEEEeehHHee
Confidence                 677889999888877         4444442211        1245667888887754

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.94  E-value=1.9e-27  Score=221.35  Aligned_cols=156  Identities=11%  Similarity=-0.015  Sum_probs=132.1

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCC---HHHHHHHHHcCChhhHhchhcCCChHHHHHHH----cCcHHHHH
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANC---IDFVKELLKMMSTEDLAKKNKIGCTAFFYAAG----SGMVEIVE   74 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~---~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~----~g~~~iv~   74 (375)
                      +++++|+++|++++.+ |.+|+||||+|+..|+   .++++.|++.. .++++.+|..|+||||+|++    .|+.++++
T Consensus       145 ~~v~~Ll~~Gad~n~~-d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~-~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~  222 (327)
T 1sw6_A          145 ELVKHLVKHGSNRLYG-DNMGESCLVKAVKSVNNYDSGTFEALLDYL-YPCLILEDSMNRTILHHIIITSGMTGCSAAAK  222 (327)
T ss_dssp             HHHHHHHHTTCCTTBC-CTTCCCHHHHHHHSSHHHHTTCHHHHHHHH-GGGGGEECTTCCCHHHHHHHHHTSTTCHHHHH
T ss_pred             HHHHHHHHcCCCCCCc-CCCCCCHHHHHHHhcccccHHHHHHHHHhh-hccccCCCCCCCCHHHHHHHHccccccHHHHH
Confidence            5788999999999987 9999999999999998   78899999984 47899999999999999999    99999999


Q ss_pred             HHHcc--------------------CCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhccCCcccchhhHHHHHHHhcC
Q 037666           75 EAMKG--------------------NKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETD  134 (375)
Q Consensus        75 ~Ll~~--------------------~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~d~~g~t~Lh~A~~~~  134 (375)
                      .|++.                    +.++ +.+|.+|.||||.|+.      +++|++.+ ++.+|.+|+||||+|+++|
T Consensus       223 ~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~~~~g~t~L~~a~~------~~~Ll~~~-~n~~d~~G~TpLh~A~~~g  294 (327)
T 1sw6_A          223 YYLDILMGWIVKKQNRPIQSGTNEKESKP-NDKNGERKDSILENLD------LKWIIANM-LNAQDSNGDTCLNIAARLG  294 (327)
T ss_dssp             HHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHHT-TTCCCTTSCCHHHHHHHHC
T ss_pred             HHHHHHHHHHhcccchHHHhhhhcccCCc-ccccccCCChhHHHHH------HHHHHHhC-CCCCCCCCCCHHHHHHHcC
Confidence            99987                    6665 7889999999999986      88999885 6888999999999999999


Q ss_pred             cHHHHHHHHhcCCcccccccCCCCcHHHHHHHhc
Q 037666          135 LYAVALRLLKDRPQLATKRDRNEETALHVLARKN  168 (375)
Q Consensus       135 ~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~  168 (375)
                      +.++++.|+++ |.+++.+|.+|+||||+|+++|
T Consensus       295 ~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~g  327 (327)
T 1sw6_A          295 NISIVDALLDY-GADPFIANKSGLRPVDFGAGLE  327 (327)
T ss_dssp             CHHHHHHHHHT-TCCTTCCCTTSCCGGGGTCC--
T ss_pred             CHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcC
Confidence            99999999988 9999999999999999998764

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.94  E-value=2e-26  Score=192.86  Aligned_cols=140  Identities=19%  Similarity=0.132  Sum_probs=132.3

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.+.|.+.|.+++.. |..|.||||+|+..|+.+++++|+++  +.+++..|..|.||||+|+..|+.+++++|++.++
T Consensus        17 ~~v~~ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~   93 (167)
T 3v31_A           17 LYLATRIEQENVINHT-DEEGFTPLMWAAAHGQIAVVEFLLQN--GADPQLLGKGRESALSLACSKGYTDIVKMLLDCGV   93 (167)
T ss_dssp             HHHHHHHHHSSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred             HHHHHHHHcCCCcCCC-CCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence            3566677788999987 99999999999999999999999999  89999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      ++ +.+|.+|.||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+..|+.+++++|+++
T Consensus        94 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~  157 (167)
T 3v31_A           94 DV-NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH  157 (167)
T ss_dssp             CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred             CC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence            96 8899999999999999999999999999998 888999999999999999999999999987

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.94  E-value=2.4e-26  Score=189.67  Aligned_cols=136  Identities=21%  Similarity=0.156  Sum_probs=126.9

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.+.|.++|.+++  .|..|.||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus        16 ~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~   91 (153)
T 1awc_B           16 DEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRA--GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGA   91 (153)
T ss_dssp             HHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred             HHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCC
Confidence            45677777888776  388999999999999999999999998  89999999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRL  142 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~L  142 (375)
                      ++ +.+|.+|.||||+|+..|+.+++++|+++++ ++.+|.+|+||||+|+.+|+.+++++|
T Consensus        92 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           92 DV-NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            96 8899999999999999999999999999998 888999999999999999999999875

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.94  E-value=4e-27  Score=201.11  Aligned_cols=151  Identities=12%  Similarity=0.060  Sum_probs=134.6

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchh-cCCChHHHHHHHcCcH----HHHHHHHccCCCCccccCCCCChHHH
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKN-KIGCTAFFYAAGSGMV----EIVEEAMKGNKDIAMVPGGDGTLPIV   96 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d-~~g~tpLh~Aa~~g~~----~iv~~Ll~~~~~~~~~~d~~g~tpLh   96 (375)
                      +.++||.|++.|+.+.++.+++.  +  ++..+ ..|+||||+|+..|+.    +++++|++.|+++ +.+|.+|+||||
T Consensus         6 ~~~~l~~Aa~~g~~~~~~~l~~~--~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh   80 (186)
T 3t8k_A            6 EYRTVSAAAMLGTYEDFLELFEK--G--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFF   80 (186)
T ss_dssp             HCSSHHHHHHHSCHHHHHHHHHH--S--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHH
T ss_pred             cccHHHHHHHcCCHHHHHHHHhc--C--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHH
Confidence            56899999999999999999976  2  45555 7899999999999975    5999999999997 899999999999


Q ss_pred             HHHHcCc------HHHHHHHHHhcc-CCcccchhh-HHHHHHHhc-----CcHHHHHHHHhcCCcccccccCCCCcHHHH
Q 037666           97 RAAALGQ------RQTVVLLYEKTK-GSLTDDECI-ELLVKLIET-----DLYAVALRLLKDRPQLATKRDRNEETALHV  163 (375)
Q Consensus        97 ~Aa~~g~------~~iv~~Ll~~~~-~~~~d~~g~-t~Lh~A~~~-----~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~  163 (375)
                      +|+..|+      .+++++|+++|+ ++.+|.+|+ ||||+|+..     ++.++++.|++..|.+++.+|.+|+||||+
T Consensus        81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~  160 (186)
T 3t8k_A           81 PLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEF  160 (186)
T ss_dssp             HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHH
T ss_pred             HHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHH
Confidence            9999987      688999999999 999999999 999999994     346788999984599999999999999999


Q ss_pred             HHHhcCCCCCCCccchhhccc
Q 037666          164 LARKNLTSSNQNPCGVENVVP  184 (375)
Q Consensus       164 A~~~~~~~~~~~~~~v~~~L~  184 (375)
                      |++.+++       +++++|.
T Consensus       161 A~~~~~~-------~~v~~L~  174 (186)
T 3t8k_A          161 VKRCQKP-------IALKMME  174 (186)
T ss_dssp             HHTTTCH-------HHHHHHH
T ss_pred             HHHcCCH-------HHHHHHH
Confidence            9999988       8888873

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.94  E-value=9e-27  Score=194.62  Aligned_cols=151  Identities=21%  Similarity=0.144  Sum_probs=136.7

Q ss_pred             hhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHH
Q 037666           53 KNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLI  131 (375)
Q Consensus        53 ~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~  131 (375)
                      .|.+|.||||.|++.|+.++++.|++.++......|..|.||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+
T Consensus         4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~   83 (165)
T 3twr_A            4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC   83 (165)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence            567899999999999999999999997665557788899999999999999999999999998 8889999999999999


Q ss_pred             hcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHHHH
Q 037666          132 ETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHKEL  209 (375)
Q Consensus       132 ~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~~l  209 (375)
                      ..++.+++++|++. +.+++.+|.+|+||||+|+..++.       ++.++|  .+++++.+|.+|+||++++.+.+.++
T Consensus        84 ~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~i  155 (165)
T 3twr_A           84 SYGHYEVAELLVKH-GAVVNVADLWKFTPLHEAAAKGKY-------EICKLLLQHGADPTKKNRDGNTPLDLVKDGDTDI  155 (165)
T ss_dssp             HTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTSCCTGGGSCTTCHHH
T ss_pred             HcCcHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCH-------HHHHHHHHcCCCCcccCCCCCChhHhHhcCChHH
Confidence            99999999999998 999999999999999999999988       788877  77889999999999999998876654


Q ss_pred             HH
Q 037666          210 KR  211 (375)
Q Consensus       210 ~~  211 (375)
                      ++
T Consensus       156 ~~  157 (165)
T 3twr_A          156 QD  157 (165)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.94  E-value=7.3e-29  Score=219.16  Aligned_cols=161  Identities=17%  Similarity=0.108  Sum_probs=143.8

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      +++++|.++|++++.. |.+|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus        35 ~~v~~Ll~~g~~~~~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~--ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga  111 (229)
T 2vge_A           35 EVVQQAVKEMNDPSQP-NEEGITALHNAICGANYSIVDFLITA--GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGA  111 (229)
T ss_dssp             HHHHHHHHHSSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred             HHHHHHHhcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            4667788899999997 99999999999999999999999999  89999999999999999999999999999999999


Q ss_pred             CCccccC-CCCChHHHHH--HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcc--cccccC
Q 037666           82 DIAMVPG-GDGTLPIVRA--AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQL--ATKRDR  155 (375)
Q Consensus        82 ~~~~~~d-~~g~tpLh~A--a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~--~~~~d~  155 (375)
                      ++ +.++ .+|.||||+|  +..|+.+++++|++.++ ++.+|..|.+++|.++..+..   +.+++. |.+  ++.+|.
T Consensus       112 ~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~---~~ll~~-ga~~~~~~~d~  186 (229)
T 2vge_A          112 AI-FATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGD---ELSFRE-GESVTVLRRDG  186 (229)
T ss_dssp             CT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTT---BCCBCT-TCEEEEEESSC
T ss_pred             Cc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhcccc---ccCccc-cccccccccCC
Confidence            97 5554 6999999999  99999999999999999 888999999999976655433   344444 776  778999


Q ss_pred             CCCcHHHHHHHhcCC
Q 037666          156 NEETALHVLARKNLT  170 (375)
Q Consensus       156 ~G~T~Lh~A~~~~~~  170 (375)
                      +|+||||+|+++|+.
T Consensus       187 ~G~TpL~~A~~~g~~  201 (229)
T 2vge_A          187 PEETDWWWAALHGQE  201 (229)
T ss_dssp             TTCSSEEEEEETTEE
T ss_pred             CcccHHHHHHHcCCc
Confidence            999999999999877

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.94  E-value=2.5e-26  Score=189.97  Aligned_cols=137  Identities=20%  Similarity=0.239  Sum_probs=126.9

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      ++.++...+.+++.. |..|+||||+ +..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.+++
T Consensus        18 v~~ll~~~~~~~~~~-~~~g~t~L~~-~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~   93 (156)
T 1bd8_A           18 VRRLLHRELVHPDAL-NRFGKTALQV-MMFGSTAIALELLKQ--GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD   93 (156)
T ss_dssp             HHHHHHTTCCCTTCC-CTTSCCHHHH-SCTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             HHHHHHhhCcCcccc-CCCCCcHHHH-HHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            455555545688887 9999999999 999999999999999  899999999999999999999999999999999999


Q ss_pred             CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      + +.+|.+|.||||+|+..|+.+++++|++. . .+.+|.+|+||||+|+..|+.++++.|+++
T Consensus        94 ~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A           94 V-NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             S-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             C-CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            6 88999999999999999999999999999 6 888999999999999999999999999875

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.92  E-value=1.8e-25  Score=180.83  Aligned_cols=124  Identities=24%  Similarity=0.187  Sum_probs=118.0

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      ...|.||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|
T Consensus        11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A   87 (136)
T 2jab_A           11 GSDLGKKLLEAARAGQDDEVRILMAN--GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLA   87 (136)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred             cccccHHHHHHHHhCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHH
Confidence            56789999999999999999999999  8999999999999999999999999999999999996 88999999999999


Q ss_pred             HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      +..|+.+++++|+++++ .+.+|.+|+||||+|+.+++.+++++|++.
T Consensus        88 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~  135 (136)
T 2jab_A           88 AFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL  135 (136)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred             HHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence            99999999999999998 888999999999999999999999999875

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.92  E-value=5.3e-25  Score=174.70  Aligned_cols=124  Identities=28%  Similarity=0.328  Sum_probs=118.4

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHH
Q 037666           21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAA  100 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~  100 (375)
                      +|+||||+|+..|+.+++++|+++  +.+++..|..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+.
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~   77 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR   77 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHH
Confidence            589999999999999999999999  8899999999999999999999999999999999986 8899999999999999


Q ss_pred             cCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCc
Q 037666          101 LGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQ  148 (375)
Q Consensus       101 ~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~  148 (375)
                      .|+.+++++|++++. .+.+|.+|+||||+|+..++.+++++|+++ |+
T Consensus        78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-Ga  125 (126)
T 1n0r_A           78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GA  125 (126)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TC
T ss_pred             cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc-CC
Confidence            999999999999998 888999999999999999999999999987 54

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.92  E-value=6.4e-26  Score=187.90  Aligned_cols=143  Identities=13%  Similarity=0.100  Sum_probs=114.8

Q ss_pred             hHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhH-H
Q 037666           49 DLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIE-L  126 (375)
Q Consensus        49 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t-~  126 (375)
                      ..+..+..|.||||+|++.|+.+++++|++.+.++ +.+|..|+||||+|+ .|+.+++++|++.+. ++.+|..|+| |
T Consensus         4 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttp   81 (156)
T 1bi7_B            4 AAGSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRP   81 (156)
T ss_dssp             ------CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCH
T ss_pred             CccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence            34567888999999999999999999999999986 889999999999985 999999999999998 8889999999 9


Q ss_pred             HHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhh
Q 037666          127 LVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTAL  201 (375)
Q Consensus       127 Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~  201 (375)
                      ||+|+..|+.+++++|+++ |.+++.+|.+|+||||+|+..++.       ++.++|  .+++++.+|..|.||.+-
T Consensus        82 L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~t~~~~  150 (156)
T 1bi7_B           82 VHDAAREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHR-------DVARYLRAAAGGTRGSNHARIDAAEG  150 (156)
T ss_dssp             HHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCH-------HHHHHHSSCC----------------
T ss_pred             HHHHHHCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCHH-------HHHHHHHHcCCCCCccCcCcCccccc
Confidence            9999999999999999998 999999999999999999999988       788877  789999999999999763

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.92  E-value=1.6e-25  Score=181.03  Aligned_cols=127  Identities=13%  Similarity=0.087  Sum_probs=119.7

Q ss_pred             hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccch-hh
Q 037666           47 TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDE-CI  124 (375)
Q Consensus        47 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~-g~  124 (375)
                      +.+++.+|..|.||||+|++.|+.+++++|++.+.++ +.+|..|+||||+|+. |+.+++++|+++++ ++.+|.. |+
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~   79 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT   79 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            3568889999999999999999999999999999986 8899999999999999 99999999999998 8889999 99


Q ss_pred             HHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          125 ELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       125 t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      ||||+|+..|+.+++++|++. +.+++.+|.+|+||||+|++.++.       ++.++|
T Consensus        80 t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~-------~~~~~L  130 (136)
T 1d9s_A           80 RPVHDAAREGFLDTLVVLHRA-GARLDVCDAWGRLPVDLAEEQGHR-------DIARYL  130 (136)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT-CCCCCCCSSSSSCHHHHHHHHTCH-------HHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCH-------HHHHHH
Confidence            999999999999999999988 899999999999999999999977       787776

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.91  E-value=1.4e-25  Score=181.63  Aligned_cols=129  Identities=21%  Similarity=0.169  Sum_probs=111.7

Q ss_pred             ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCC
Q 037666           11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGD   90 (375)
Q Consensus        11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~   90 (375)
                      |+|+ . .|.+|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.+.++ +.+|.+
T Consensus         1 G~d~-~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~   75 (137)
T 3c5r_A            1 GIDP-F-TNHRGETLLHIASIKGDIPSVEYLLQN--GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQ   75 (137)
T ss_dssp             ---C-C-CCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGG
T ss_pred             CCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCC
Confidence            4455 3 388999999999999999999999998  8889999999999999999999999999999999886 788999


Q ss_pred             CChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHh
Q 037666           91 GTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLK  144 (375)
Q Consensus        91 g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~  144 (375)
                      |.||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..+..++++.+.+
T Consensus        76 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~  130 (137)
T 3c5r_A           76 NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK  130 (137)
T ss_dssp             GCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence            9999999999999999999999988 88889999999999998888777755544

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.91  E-value=1.4e-24  Score=175.55  Aligned_cols=125  Identities=17%  Similarity=0.084  Sum_probs=116.1

Q ss_pred             hHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHH
Q 037666           49 DLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELL  127 (375)
Q Consensus        49 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~L  127 (375)
                      ++ .+|.+|+||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|++.+. ++.+|..|+|||
T Consensus         3 d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L   80 (137)
T 3c5r_A            3 DP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPL   80 (137)
T ss_dssp             -C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHH
T ss_pred             CC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHH
Confidence            44 67899999999999999999999999999986 8899999999999999999999999999998 888999999999


Q ss_pred             HHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          128 VKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       128 h~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      |+|+..++.+++++|++. |.+++.+|.+|+||||+|+..+..       ++.+++
T Consensus        81 ~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~-------~~l~~l  128 (137)
T 3c5r_A           81 HDAAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDDESMK-------SLLLLP  128 (137)
T ss_dssp             HHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGCCCHHHH-------HHHSCC
T ss_pred             HHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHhhccHH-------HHHhhc
Confidence            999999999999999988 999999999999999999988766       666666

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.91  E-value=8.8e-25  Score=191.67  Aligned_cols=135  Identities=20%  Similarity=0.197  Sum_probs=111.8

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHcc-CCCCccccCCCCChHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG-NKDIAMVPGGDGTLPIVR   97 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~tpLh~   97 (375)
                      |.+|.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..|+.+++++|++. +.++ +.+|.+|.||||+
T Consensus        70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~  146 (222)
T 3ehr_A           70 AESIDNPLHEAAKRGNLSWLRECLDN--RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHA  146 (222)
T ss_dssp             EEEESCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHH
T ss_pred             ccccccccccccccCcHHHHHHHHhC--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHH
Confidence            66789999999999999999999998  889999999999999999999999999999998 7775 8899999999999


Q ss_pred             HHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCC
Q 037666           98 AAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNE  157 (375)
Q Consensus        98 Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G  157 (375)
                      |+..|+.+++++|+++++ ++.+|.+|+||||+|+..++.++++.++.. +...+.+|.+|
T Consensus       147 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~-~~~~~~~~~~~  206 (222)
T 3ehr_A          147 AAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGT-DAVRTLSNAED  206 (222)
T ss_dssp             HHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred             HHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhcc-chhhhccchhh
Confidence            999999999999999998 888999999999999999999999988887 66666555543

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.90  E-value=2.4e-24  Score=170.90  Aligned_cols=116  Identities=22%  Similarity=0.267  Sum_probs=99.7

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      +..|.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|+||||+|
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A   80 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAK--GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSA   80 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHc--CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHH
Confidence            56788999999999999999999998  7889999999999999999999999999999999886 88899999999999


Q ss_pred             HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHH
Q 037666           99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYA  137 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~  137 (375)
                      +..|+.+++++|+++++ ++.+|.+|+||||+|...+..+
T Consensus        81 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~  120 (123)
T 3aaa_C           81 VYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA  120 (123)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred             HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence            99999999999999888 7778888888888885544433

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.90  E-value=1.3e-24  Score=184.87  Aligned_cols=136  Identities=21%  Similarity=0.163  Sum_probs=99.3

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccC-CCCChHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPG-GDGTLPIVR   97 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpLh~   97 (375)
                      +.+|+||||+|+..|+.++++.|++   +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+| .+|.||||+
T Consensus        41 ~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~  116 (183)
T 3deo_A           41 VSEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHM  116 (183)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHTT---TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHh---cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHH
Confidence            4467788888888888888888776   3567777777888888888888888888888877775 5555 777888888


Q ss_pred             HHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCc
Q 037666           98 AAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNP  176 (375)
Q Consensus        98 Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~  176 (375)
                      |+..|+.+++++|+++++ ++.+|.+|+||||+|++.++                  ...+.|+|++|++.+..      
T Consensus       117 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~~~~~~------  172 (183)
T 3deo_A          117 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLE------  172 (183)
T ss_dssp             HHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHHHHHHH------
T ss_pred             HHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc------------------CcccccHHHHHHHcCHH------
Confidence            888888888888877777 66777777777777776431                  13556777777777665      


Q ss_pred             cchhhcc
Q 037666          177 CGVENVV  183 (375)
Q Consensus       177 ~~v~~~L  183 (375)
                       ++.++|
T Consensus       173 -~i~~~L  178 (183)
T 3deo_A          173 -KVINVL  178 (183)
T ss_dssp             -HHHHHH
T ss_pred             -HHHHHH
Confidence             566555

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.90  E-value=6.2e-25  Score=187.52  Aligned_cols=137  Identities=12%  Similarity=0.007  Sum_probs=119.6

Q ss_pred             cccccCCCCCcHHHHHHHcCCH----HHHHHHHHcCChhhHhchhcCCChHHHHHHHcCc------HHHHHHHHccCCCC
Q 037666           14 IGQEITNLGNTALHVAAQANCI----DFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGM------VEIVEEAMKGNKDI   83 (375)
Q Consensus        14 ~~~~~d~~g~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~------~~iv~~Ll~~~~~~   83 (375)
                      ++...|..|+||||+|+..|+.    +++++|+++  |++++.+|.+|+||||+|+..|+      .+++++|++.|+++
T Consensus        30 ~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~--Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi  107 (186)
T 3t8k_A           30 YEDKESVLKSNILYDVLRNNNDEARYKISMFLINK--GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI  107 (186)
T ss_dssp             SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT--TCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS
T ss_pred             cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC
Confidence            4444237799999999999985    599999999  89999999999999999999887      68899999999997


Q ss_pred             ccccCCCCC-hHHHHHHHcC-----cHHHHHHHHH-hcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCccccccc
Q 037666           84 AMVPGGDGT-LPIVRAAALG-----QRQTVVLLYE-KTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRD  154 (375)
Q Consensus        84 ~~~~d~~g~-tpLh~Aa~~g-----~~~iv~~Ll~-~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d  154 (375)
                       +.+|.+|. ||||+|+..+     +.+++++|++ .++ ++.+|..|+||||+|++.++.++++.|+.. ....+.+|
T Consensus       108 -n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~-~~~~~~~~  184 (186)
T 3t8k_A          108 -TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY-IKKYNLKE  184 (186)
T ss_dssp             -SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH-HHHHTCCC
T ss_pred             -CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH-HHHHhccc
Confidence             89999999 9999999944     4679999999 888 999999999999999999999999998876 33344443

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.90  E-value=4.5e-25  Score=208.37  Aligned_cols=158  Identities=15%  Similarity=0.033  Sum_probs=130.6

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhh---HhchhcCCChHHHHHHHcCcHHHHHHHHccCCCC--ccccCCCCCh
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTED---LAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDI--AMVPGGDGTL   93 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~---~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~--~~~~d~~g~t   93 (375)
                      +.+++||||+|++.|+.++|++|+++  +..   .+..|..|.||||+|++.|+.++|++|++.+++.  .+..+.+ .|
T Consensus        89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~--ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~T  165 (376)
T 2aja_A           89 GIKSEVICFVAAITGCSSALDTLCLL--LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YH  165 (376)
T ss_dssp             TCCHHHHHHHHHHHCCHHHHHHHTTC----CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HH
T ss_pred             CCCcCCHHHHHHHcCCHHHHHHHHHc--CCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CC
Confidence            55678999999999999999999998  541   2234556789999999999999999999999752  1223333 99


Q ss_pred             HHHHHHHcCcHHHHHHHHHhcc-CCc--ccchhhHHHHHHH-hcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcC
Q 037666           94 PIVRAAALGQRQTVVLLYEKTK-GSL--TDDECIELLVKLI-ETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNL  169 (375)
Q Consensus        94 pLh~Aa~~g~~~iv~~Ll~~~~-~~~--~d~~g~t~Lh~A~-~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~  169 (375)
                      |||+|+.+|+.+++++|+++++ .+.  .|.+|.||||+|+ .+|+.+++++|++. |.       +|+||||+|+++|+
T Consensus       166 pLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~-ga-------~~~taL~~Aa~~g~  237 (376)
T 2aja_A          166 AFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC-PV-------MLAYAEIHEFEYGE  237 (376)
T ss_dssp             HHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS-HH-------HHHHHHHCTTTTTT
T ss_pred             HHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC-CC-------ccchHHHHHHHCCC
Confidence            9999999999999999999998 555  8889999999999 99999999999985 43       38999999999998


Q ss_pred             CCCCCCccchhhcc--chhhHhhhcCC
Q 037666          170 TSSNQNPCGVENVV--PKKLAEAINTG  194 (375)
Q Consensus       170 ~~~~~~~~~v~~~L--~~~~~~~~n~~  194 (375)
                      .       +++++|  .+++++.++..
T Consensus       238 ~-------evv~lL~~~ga~~~~~~~~  257 (376)
T 2aja_A          238 K-------YVNPFIARHVNRLKEMHDA  257 (376)
T ss_dssp             T-------THHHHHHHHHHHHHHHHTT
T ss_pred             H-------HHHHHHHhcCcccccccHH
Confidence            8       888888  56666666543

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.90  E-value=6.4e-24  Score=195.07  Aligned_cols=139  Identities=14%  Similarity=0.034  Sum_probs=121.5

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhc------hhcCCChHHHHHHHc---CcHHHHHHHHccCCCCccccCCCCC
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAK------KNKIGCTAFFYAAGS---GMVEIVEEAMKGNKDIAMVPGGDGT   92 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~------~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~g~   92 (375)
                      +.++||.|+..|+.+.++.|++.  +.+++.      .|..|+||||+|+..   |+.+++++|++.++++ +.+|.+|+
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~  227 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGN  227 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCC
T ss_pred             hHHHHhhhhhccCHHHHHHHHhc--CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCC
Confidence            45789999999999999999988  788887      688999999999997   8999999999999996 88999999


Q ss_pred             hHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCC
Q 037666           93 LPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLT  170 (375)
Q Consensus        93 tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~  170 (375)
                      ||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..++.+++++|++. +.+      .|.||||+|++.|+.
T Consensus       228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~-ga~------~g~tpLh~A~~~g~~  299 (301)
T 2b0o_E          228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA-QAG------TFAFPLHVDYSWVIS  299 (301)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHH-HHH------TTSSCCC--------
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh-cCC------CCCChhHHHHhcCCc
Confidence            99999999999999999999999 889999999999999999999999999987 432      689999999998864

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.90  E-value=1e-23  Score=170.41  Aligned_cols=123  Identities=18%  Similarity=0.128  Sum_probs=113.6

Q ss_pred             chhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHH
Q 037666           52 KKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKL  130 (375)
Q Consensus        52 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A  130 (375)
                      .....|.||||+|++.|+.++++.|++.++++ +.+|.+|.||||+|+..|+.+++++|++.++ ++..|.+|+||||+|
T Consensus         9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A   87 (136)
T 2jab_A            9 HHGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLA   87 (136)
T ss_dssp             ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred             cccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence            34567899999999999999999999999996 8899999999999999999999999999998 888999999999999


Q ss_pred             HhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          131 IETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       131 ~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      +..++.+++++|+++ +.+++.+|.+|+||||+|++.++.       ++.++|
T Consensus        88 ~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~~~~~-------~~~~~L  132 (136)
T 2jab_A           88 AFIGHLEIAEVLLKH-GADVNAQDKFGKTAFDISIGNGNE-------DLAEIL  132 (136)
T ss_dssp             HHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHHH
T ss_pred             HHcCCHHHHHHHHHc-CCCCcCcCCCCCCHHHHHHHCCCH-------HHHHHH
Confidence            999999999999998 999999999999999999999977       777765

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.89  E-value=9.5e-25  Score=206.14  Aligned_cols=186  Identities=11%  Similarity=0.032  Sum_probs=133.3

Q ss_pred             HHHHHHhhCccccc--cccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhh---HhchhcCCChHHHHHHHcCcHHHHHHH
Q 037666            2 VAKDIYDKYEDEIG--QEITNLGNTALHVAAQANCIDFVKELLKMMSTED---LAKKNKIGCTAFFYAAGSGMVEIVEEA   76 (375)
Q Consensus         2 ~v~~lL~~~~~~~~--~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~---~~~~d~~g~tpLh~Aa~~g~~~iv~~L   76 (375)
                      +++++|.++|....  ...|..|+||||+|+..|+.++|++|+++  +++   .+..+.+ .||||+|++.|+.+++++|
T Consensus       106 e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~--gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~L  182 (376)
T 2aja_A          106 SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL--APTEIMAMIQAEN-YHAFRLAAENGHLHVLNRL  182 (376)
T ss_dssp             HHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS--CTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhC--CCCccccccCCCC-CCHHHHHHHCCCHHHHHHH
Confidence            46777888887211  01245688999999999999999999999  543   2333333 9999999999999999999


Q ss_pred             HccCCCCccc--cCCCCChHHHHHH-HcCcHHHHHHHHHhccCCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccc--
Q 037666           77 MKGNKDIAMV--PGGDGTLPIVRAA-ALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLAT--  151 (375)
Q Consensus        77 l~~~~~~~~~--~d~~g~tpLh~Aa-~~g~~~iv~~Ll~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~--  151 (375)
                      ++.+++. +.  +|.+|.||||+|+ .+|+.+++++|++.+      ..|+||||.|+++|+.+++++|++. +.+++  
T Consensus       183 l~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g------a~~~taL~~Aa~~g~~evv~lL~~~-ga~~~~~  254 (376)
T 2aja_A          183 CELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP------VMLAYAEIHEFEYGEKYVNPFIARH-VNRLKEM  254 (376)
T ss_dssp             HHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH------HHHHHHHHCTTTTTTTTHHHHHHHH-HHHHHHH
T ss_pred             HHcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC------CccchHHHHHHHCCCHHHHHHHHhc-Ccccccc
Confidence            9999986 55  7888999999999 999999999999865      3589999999999999999888875 22221  


Q ss_pred             -----------------------------------------------------------cccCCCCcHHHHHHHhcCCCC
Q 037666          152 -----------------------------------------------------------KRDRNEETALHVLARKNLTSS  172 (375)
Q Consensus       152 -----------------------------------------------------------~~d~~G~T~Lh~A~~~~~~~~  172 (375)
                                                                                 ..++.++||||+|++.|+.  
T Consensus       255 ~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~--  332 (376)
T 2aja_A          255 HDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQ--  332 (376)
T ss_dssp             HTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCT--
T ss_pred             cHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcH--
Confidence                                                                       1224566778888888777  


Q ss_pred             CCCccchhhccchhhHhhhcCCCCChhhhhHHHH
Q 037666          173 NQNPCGVENVVPKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       173 ~~~~~~v~~~L~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                           +++++|.+. ...++..|+||++++..++
T Consensus       333 -----e~v~lLl~~-~~v~~~~~~~~~~~~~~~~  360 (376)
T 2aja_A          333 -----GACALLLSI-PSVLALTKANNYYINETGG  360 (376)
T ss_dssp             -----THHHHHTTS-HHHHHSCC-----------
T ss_pred             -----HHHHHHHcC-hHHHHHHHHhccccccccc
Confidence                 677766332 3556677778877765543

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.89  E-value=3.4e-24  Score=190.98  Aligned_cols=137  Identities=20%  Similarity=0.172  Sum_probs=115.0

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccC-CCCChHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPG-GDGTLPIVR   97 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpLh~   97 (375)
                      +.+|+||||+|+..|+.++++.|++   +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+| ..|.||||+
T Consensus        42 ~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~  117 (244)
T 3ui2_A           42 VSEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHM  117 (244)
T ss_dssp             HHHHHHHHHHHHTTTCHHHHHHTTT---TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHH
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHH
Confidence            3468899999999999999999997   3678888999999999999999999999999998886 5666 779999999


Q ss_pred             HHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCc
Q 037666           98 AAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNP  176 (375)
Q Consensus        98 Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~  176 (375)
                      |+..|+.+++++|+++++ ++.+|.+|+||||+|+..+                  .+..|.||||+|++.|+.      
T Consensus       118 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~------------------~~~~~~~~l~~a~~~g~~------  173 (244)
T 3ui2_A          118 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL------------------KTTPKGNPMQFGRRIGLE------  173 (244)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH------------------TTCCCSSHHHHHHHHHHH------
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH------------------hccCCCCHHHHHHHcChH------
Confidence            999999999999999888 8888899999999988632                  235778999999988877      


Q ss_pred             cchhhccc
Q 037666          177 CGVENVVP  184 (375)
Q Consensus       177 ~~v~~~L~  184 (375)
                       ++.++|.
T Consensus       174 -~iv~~L~  180 (244)
T 3ui2_A          174 -KVINVLE  180 (244)
T ss_dssp             -HHHHHHH
T ss_pred             -HHHHHHH
Confidence             7777763

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.89  E-value=3.4e-23  Score=164.16  Aligned_cols=119  Identities=25%  Similarity=0.281  Sum_probs=112.7

Q ss_pred             CCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcC
Q 037666           56 IGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETD  134 (375)
Q Consensus        56 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~  134 (375)
                      +|+||||+|++.|+.++++.|++.++++ +.+|..|.||||+|+..|+.+++++|++.+. ++.+|..|+||||+|+..+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~   79 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG   79 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence            5899999999999999999999999986 8889999999999999999999999999998 8889999999999999999


Q ss_pred             cHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          135 LYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       135 ~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      +.+++++|+++ +.+++.+|.+|+||||+|++.++.       ++.++|
T Consensus        80 ~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~-------~~~~~L  120 (126)
T 1n0r_A           80 HLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHL-------EVVKLL  120 (126)
T ss_dssp             CHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHHH
T ss_pred             hHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCcH-------HHHHHH
Confidence            99999999998 999999999999999999999877       777776

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.89  E-value=2.6e-24  Score=191.70  Aligned_cols=160  Identities=16%  Similarity=0.042  Sum_probs=136.4

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      ...+.+++.+++..|+.+.++.+...  +.+   .+.+|.||||+|++.|+.++++.|++ +.++ +.+|.+|+||||+|
T Consensus        12 ~~~~~~~~l~~~~~g~~~~~~~~~~~--~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A   84 (244)
T 3ui2_A           12 AGEGAMEYLIEWKDGHSPSWVPSSYI--AAD---VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFV   84 (244)
T ss_dssp             ETTTEEEEEEEESSCCCCEEEEGGGS--CHH---HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHH
T ss_pred             cCCCccHHHHHHHcCCCccccccccc--ccc---cccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHH
Confidence            34567777788888876665554444  333   34678999999999999999999999 8875 88999999999999


Q ss_pred             HHcCcHHHHHHHHHhcc-CCccc-chhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCc
Q 037666           99 AALGQRQTVVLLYEKTK-GSLTD-DECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNP  176 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~~~d-~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~  176 (375)
                      +..|+.+++++|+++++ ++.+| ..|+||||+|+.+|+.++++.|+++ |.+++.+|.+|+||||+|++.+..      
T Consensus        85 ~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~~------  157 (244)
T 3ui2_A           85 AGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILKT------  157 (244)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHHTT------
T ss_pred             HHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHHHhc------
Confidence            99999999999999999 77777 8899999999999999999999998 999999999999999999987532      


Q ss_pred             cchhhccchhhHhhhcCCCCChhhhhHHHHHH
Q 037666          177 CGVENVVPKKLAEAINTGGLTPTALFSEKHKE  208 (375)
Q Consensus       177 ~~v~~~L~~~~~~~~n~~g~tpl~~a~~~~~~  208 (375)
                                      ..+.||++++.+....
T Consensus       158 ----------------~~~~~~l~~a~~~g~~  173 (244)
T 3ui2_A          158 ----------------TPKGNPMQFGRRIGLE  173 (244)
T ss_dssp             ----------------CCCSSHHHHHHHHHHH
T ss_pred             ----------------cCCCCHHHHHHHcChH
Confidence                            4678999998776543

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.89  E-value=2.5e-23  Score=165.03  Aligned_cols=113  Identities=19%  Similarity=0.175  Sum_probs=104.2

Q ss_pred             hhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHH
Q 037666           53 KNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLI  131 (375)
Q Consensus        53 ~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~  131 (375)
                      .+..|.||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+
T Consensus         3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~   81 (123)
T 3aaa_C            3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV   81 (123)
T ss_dssp             ----CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred             cccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence            3567899999999999999999999999986 8899999999999999999999999999998 8889999999999999


Q ss_pred             hcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHh
Q 037666          132 ETDLYAVALRLLKDRPQLATKRDRNEETALHVLARK  167 (375)
Q Consensus       132 ~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~  167 (375)
                      ..++.++++.|+++ +.+++.+|.+|+||||+|...
T Consensus        82 ~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~  116 (123)
T 3aaa_C           82 YEGHVSCVKLLLSK-GADKTVKGPDGLTAFEATDNQ  116 (123)
T ss_dssp             HHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCCCH
T ss_pred             HcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHhCCH
Confidence            99999999999998 999999999999999999544

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.88  E-value=9.8e-23  Score=173.26  Aligned_cols=130  Identities=18%  Similarity=0.059  Sum_probs=117.6

Q ss_pred             hhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCccc-chhhHHHHHH
Q 037666           53 KNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTD-DECIELLVKL  130 (375)
Q Consensus        53 ~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d-~~g~t~Lh~A  130 (375)
                      .|.+|.||||+|++.|+.++++.|++ +.++ +.+|.+|+||||+|+..|+.+++++|++.++ ++.+| .+|+||||+|
T Consensus        40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A  117 (183)
T 3deo_A           40 VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA  117 (183)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHH
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence            46789999999999999999999999 8775 8899999999999999999999999999998 77777 8899999999


Q ss_pred             HhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccchhhHhhhcCCCCChhhhhHHHHH
Q 037666          131 IETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEKHK  207 (375)
Q Consensus       131 ~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~~~~~~~n~~g~tpl~~a~~~~~  207 (375)
                      +..|+.++++.|+++ |.+++.+|.+|+||||+|++.+..                      ..+.+|++++.+...
T Consensus       118 ~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~----------------------~~~~~~l~~a~~~~~  171 (183)
T 3deo_A          118 AGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILKT----------------------TPKGNPMQFGRRIGL  171 (183)
T ss_dssp             HHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHHHT----------------------CCCCSHHHHHHHHHH
T ss_pred             HhcCcHHHHHHHHHc-CCCCcCCCCCCCCHHHHHHHhccC----------------------cccccHHHHHHHcCH
Confidence            999999999999998 999999999999999999988633                      356788888776643

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.88  E-value=1.9e-23  Score=183.20  Aligned_cols=168  Identities=11%  Similarity=0.066  Sum_probs=130.3

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcC-------------ChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCcc
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMM-------------STEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAM   85 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~-------------~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~   85 (375)
                      |.+++++.+++.+.|+...+..+.+..             +...++..|.+|.||||+|+..|+.++++.|++.+.++ +
T Consensus        22 d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~  100 (222)
T 3ehr_A           22 TFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-N  100 (222)
T ss_dssp             CCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-T
T ss_pred             CcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCCCCc-c
Confidence            556677777777666643332221110             01235667888999999999999999999999999996 8


Q ss_pred             ccCCCCChHHHHHHHcCcHHHHHHHHHh-cc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHH
Q 037666           86 VPGGDGTLPIVRAAALGQRQTVVLLYEK-TK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHV  163 (375)
Q Consensus        86 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~  163 (375)
                      .+|..|.||||+|+..|+.+++++|++. +. ++.+|.+|+||||+|+..|+.+++++|+++ |.+++.+|.+|+||||+
T Consensus       101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~  179 (222)
T 3ehr_A          101 GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAK-GARTDLRNIEKKLAFDM  179 (222)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCSCCCCTTSCCHHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCCHHHH
Confidence            8999999999999999999999999998 66 888999999999999999999999999999 99999999999999999


Q ss_pred             HHHhcCCCCCCCccchhhcc--chhhHhhhcCCC
Q 037666          164 LARKNLTSSNQNPCGVENVV--PKKLAEAINTGG  195 (375)
Q Consensus       164 A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g  195 (375)
                      |+..+..       ++.+.+  .++..+.+|.+|
T Consensus       180 A~~~~~~-------~~l~~l~~~~~~~~~~~~~~  206 (222)
T 3ehr_A          180 ATNAACA-------SLLKKKQGTDAVRTLSNAED  206 (222)
T ss_dssp             CCSHHHH-------HHHC----------------
T ss_pred             hcchhHH-------HHHHHHhccchhhhccchhh
Confidence            9998876       676666  445555555444

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.86  E-value=6.8e-22  Score=148.71  Aligned_cols=92  Identities=33%  Similarity=0.444  Sum_probs=85.5

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHH
Q 037666           21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAA  100 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~  100 (375)
                      +|+||||+|+..|+.+++++|+++  +.+++.+|.+|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+.
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~   77 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR   77 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHH
Confidence            489999999999999999999999  8999999999999999999999999999999999996 8899999999999999


Q ss_pred             cCcHHHHHHHHHhcc
Q 037666          101 LGQRQTVVLLYEKTK  115 (375)
Q Consensus       101 ~g~~~iv~~Ll~~~~  115 (375)
                      .|+.+++++|++.++
T Consensus        78 ~~~~~~~~~Ll~~ga   92 (93)
T 1n0q_A           78 NGHLEVVKLLLEAGA   92 (93)
T ss_dssp             TTCHHHHHHHHHTTC
T ss_pred             cCCHHHHHHHHHcCC
Confidence            999999999998874

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.86  E-value=4.7e-22  Score=187.08  Aligned_cols=145  Identities=17%  Similarity=0.151  Sum_probs=116.4

Q ss_pred             CCCCcHHHHHHHc-CCHHHHHHHHHcCChhhHhchh--cCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHH
Q 037666           20 NLGNTALHVAAQA-NCIDFVKELLKMMSTEDLAKKN--KIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIV   96 (375)
Q Consensus        20 ~~g~tpLh~A~~~-g~~~~v~~Ll~~~~~~~~~~~d--~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh   96 (375)
                      ..+.||||.|+.. |+.++++.|+++  +.+++..|  ..|.||||+|+..|+.+++++|++.++++ +.+|.+|+||||
T Consensus       197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~--Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh  273 (368)
T 3jue_A          197 LHPGALLFRASGHPPSLPTMADALAH--GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLH  273 (368)
T ss_dssp             CCHHHHHHHHTSSSCCHHHHHHHHHT--TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred             CCCCcHHHHHHHccCCHHHHHHHHHc--CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHH
Confidence            3456899999999 999999999999  89999888  89999999999999999999999999997 889999999999


Q ss_pred             HHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc--CCcccccccCCCCcHHHHHHHh
Q 037666           97 RAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD--RPQLATKRDRNEETALHVLARK  167 (375)
Q Consensus        97 ~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~--~~~~~~~~d~~G~T~Lh~A~~~  167 (375)
                      +|+..|+.+++++|+++++ ++.+|.+|+||||+|+..++.+++++|+..  .+......+..+.|+++++...
T Consensus       274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~  347 (368)
T 3jue_A          274 HATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF  347 (368)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred             HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence            9999999999999999999 889999999999999999999999999876  2334445677888999887665

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.85  E-value=3.8e-21  Score=176.50  Aligned_cols=137  Identities=15%  Similarity=0.028  Sum_probs=118.9

Q ss_pred             CChHHHHHHHcCcHHHHHHHHccCCCCccc------cCCCCChHHHHHHHc---CcHHHHHHHHHhcc-CCcccchhhHH
Q 037666           57 GCTAFFYAAGSGMVEIVEEAMKGNKDIAMV------PGGDGTLPIVRAAAL---GQRQTVVLLYEKTK-GSLTDDECIEL  126 (375)
Q Consensus        57 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~------~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~-~~~~d~~g~t~  126 (375)
                      +.++||.|+..|+.+.++.|++.++++ +.      .|..|+||||+|+..   |+.+++++|++.++ ++.+|.+|+||
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp  229 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA  229 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred             hHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence            446799999999999999999999986 44      688999999999997   89999999999999 88899999999


Q ss_pred             HHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccchhhHhhhcCCCCChhhhhHHHH
Q 037666          127 LVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       127 Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ||+|+..|+.++++.|++. |.+++.+|.+|+||||+|+..++.       +++++|.....+    .|.||+++|.+..
T Consensus       230 Lh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~~~~-------~iv~~Ll~~ga~----~g~tpLh~A~~~g  297 (301)
T 2b0o_E          230 LHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARKKHHK-------ECEELLEQAQAG----TFAFPLHVDYSWV  297 (301)
T ss_dssp             HHHHHHTTCHHHHHHHHHT-TCCCSCCCTTSCCHHHHHHHHTCH-------HHHHHHHHHHHH----TTSSCCC------
T ss_pred             HHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCH-------HHHHHHHHhcCC----CCCChhHHHHhcC
Confidence            9999999999999999998 999999999999999999999988       888888443322    6899999987653

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.84  E-value=2.4e-21  Score=175.81  Aligned_cols=120  Identities=15%  Similarity=0.057  Sum_probs=107.8

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCChhh------HhchhcCCChHHHHHHHc---CcHHHHHHHHccCCCCccccCCCCCh
Q 037666           23 NTALHVAAQANCIDFVKELLKMMSTED------LAKKNKIGCTAFFYAAGS---GMVEIVEEAMKGNKDIAMVPGGDGTL   93 (375)
Q Consensus        23 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~------~~~~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~g~t   93 (375)
                      .++||.|+..|+.+.++.+++.  +.+      ++..|..|+||||+|+..   |+.+++++|++.++++ +.+|.+|+|
T Consensus       131 l~~l~~a~~~~d~~~~~~ll~~--g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~T  207 (278)
T 1dcq_A          131 LHSLCEAVKTRDIFGLLQAYAD--GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGST  207 (278)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHT--TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCC
T ss_pred             hhhhhhHhhhcccHHHHHHHHh--hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCC
Confidence            4689999999999999999988  666      444578899999999998   8999999999999986 888999999


Q ss_pred             HHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           94 PIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        94 pLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      |||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..|+.++++.|++.
T Consensus       208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~  260 (278)
T 1dcq_A          208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA  260 (278)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            9999999999999999999998 888999999999999999999999999887

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.83  E-value=2.2e-21  Score=151.79  Aligned_cols=104  Identities=30%  Similarity=0.306  Sum_probs=71.7

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666           19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA   98 (375)
Q Consensus        19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A   98 (375)
                      |.+|+||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|
T Consensus         6 d~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A   82 (115)
T 2l6b_A            6 SKDGNTPLHNAAKNGHAEEVKKLLSK--GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLA   82 (115)
T ss_dssp             SCSSCCHHHHHHHHTCHHHHHHHTTT--TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHH
Confidence            66777777777777777777777776  6667777777777777777777777777777777765 66677777777777


Q ss_pred             HHcCcHHHHHHHHHhcc-CCcccchhhH
Q 037666           99 AALGQRQTVVLLYEKTK-GSLTDDECIE  125 (375)
Q Consensus        99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t  125 (375)
                      +..|+.+++++|+++++ ++.++..|.+
T Consensus        83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~  110 (115)
T 2l6b_A           83 KKNGHHEIVKLLDAKGADVNARSWGSSH  110 (115)
T ss_dssp             HTTTCHHHHHHHHTTSSSHHHHSCCCC-
T ss_pred             HHCCCHHHHHHHHHcCCCCCcCCccccc
Confidence            77777777777766665 4444444443

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.83  E-value=8e-21  Score=178.67  Aligned_cols=144  Identities=15%  Similarity=0.120  Sum_probs=113.7

Q ss_pred             hhcCCChHHHHHHHc-CcHHHHHHHHccCCCCccccC--CCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHH
Q 037666           53 KNKIGCTAFFYAAGS-GMVEIVEEAMKGNKDIAMVPG--GDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLV  128 (375)
Q Consensus        53 ~d~~g~tpLh~Aa~~-g~~~iv~~Ll~~~~~~~~~~d--~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh  128 (375)
                      .+..+.||||.|+.. |+.++++.|++.++++ +..|  .+|.||||+|+..|+.+++++|+++++ ++..|.+|+||||
T Consensus       195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh  273 (368)
T 3jue_A          195 GSLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLH  273 (368)
T ss_dssp             --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence            344567899999999 9999999999999997 7777  889999999999999999999999999 8899999999999


Q ss_pred             HHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccch-----hhHhhhcCCCCChhhhhH
Q 037666          129 KLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPK-----KLAEAINTGGLTPTALFS  203 (375)
Q Consensus       129 ~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~-----~~~~~~n~~g~tpl~~a~  203 (375)
                      +|+..|+.+++++|+++ |.+++.+|.+|+||||+|+..++.       +++++|..     .+....+..+.|+++++.
T Consensus       274 ~A~~~g~~~~v~~LL~~-Gad~~~~d~~G~TpL~~A~~~g~~-------~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~  345 (368)
T 3jue_A          274 HATILGHTGLACLFLKR-GADLGARDSEGRDPLTIAMETANA-------DIVTLLRLAKMREAEAAQGQAGDETYLDIFR  345 (368)
T ss_dssp             HHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHHHHHHHC--------------------
T ss_pred             HHHHcCcHHHHHHHHHC-cCCCCCcCCCCCCHHHHHHHCCCH-------HHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence            99999999999999998 999999999999999999999988       88888732     333455677888888865


Q ss_pred             HH
Q 037666          204 EK  205 (375)
Q Consensus       204 ~~  205 (375)
                      ..
T Consensus       346 ~~  347 (368)
T 3jue_A          346 DF  347 (368)
T ss_dssp             --
T ss_pred             HH
Confidence            43

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.82  E-value=8.4e-21  Score=148.44  Aligned_cols=108  Identities=19%  Similarity=0.120  Sum_probs=100.5

Q ss_pred             chhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHH
Q 037666           52 KKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKL  130 (375)
Q Consensus        52 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A  130 (375)
                      .+|.+|+||||+|+..|+.++++.|++.++++ +.+|..|.||||+|+..|+.+++++|++.++ .+.+|.+|+||||+|
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A   82 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA   82 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence            57889999999999999999999999999996 8899999999999999999999999999998 888999999999999


Q ss_pred             HhcCcHHHHHHHHhcCCcccccccCCCCcHH
Q 037666          131 IETDLYAVALRLLKDRPQLATKRDRNEETAL  161 (375)
Q Consensus       131 ~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~L  161 (375)
                      +..++.+++++|+++ |.++|.+|..|.||-
T Consensus        83 ~~~~~~~~~~~Ll~~-ga~~n~~~~~~~~~~  112 (115)
T 2l6b_A           83 KKNGHHEIVKLLDAK-GADVNARSWGSSHHH  112 (115)
T ss_dssp             HTTTCHHHHHHHHTT-SSSHHHHSCCCC---
T ss_pred             HHCCCHHHHHHHHHc-CCCCCcCCccccccc
Confidence            999999999999988 999999999999873

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.82  E-value=3.9e-20  Score=138.98  Aligned_cols=89  Identities=25%  Similarity=0.257  Sum_probs=84.3

Q ss_pred             CCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcC
Q 037666           56 IGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETD  134 (375)
Q Consensus        56 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~  134 (375)
                      +|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~   79 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG   79 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            4899999999999999999999999996 8899999999999999999999999999999 8889999999999999999


Q ss_pred             cHHHHHHHHhc
Q 037666          135 LYAVALRLLKD  145 (375)
Q Consensus       135 ~~~~v~~LL~~  145 (375)
                      +.+++++|++.
T Consensus        80 ~~~~~~~Ll~~   90 (93)
T 1n0q_A           80 HLEVVKLLLEA   90 (93)
T ss_dssp             CHHHHHHHHHT
T ss_pred             CHHHHHHHHHc
Confidence            99999999987

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.81  E-value=8e-20  Score=165.82  Aligned_cols=160  Identities=14%  Similarity=0.073  Sum_probs=132.5

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHcCC------hh---h-------Hh-------------chhcCCChHHHHHHHcC
Q 037666           18 ITNLGNTALHVAAQANCIDFVKELLKMMS------TE---D-------LA-------------KKNKIGCTAFFYAAGSG   68 (375)
Q Consensus        18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~------~~---~-------~~-------------~~d~~g~tpLh~Aa~~g   68 (375)
                      .|..+.++|+.+...|+..+.+.+....+      |.   +       +.             ..+....++||.|+..|
T Consensus        62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~  141 (278)
T 1dcq_A           62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR  141 (278)
T ss_dssp             TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred             cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence            47788999999999999766655542210      00   0       00             00112347899999999


Q ss_pred             cHHHHHHHHccCCCCc-----cccCCCCChHHHHHHHc---CcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHH
Q 037666           69 MVEIVEEAMKGNKDIA-----MVPGGDGTLPIVRAAAL---GQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVA  139 (375)
Q Consensus        69 ~~~iv~~Ll~~~~~~~-----~~~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v  139 (375)
                      +.+.++.+++.+.+..     +..|..|+||||+|+..   |+.+++++|+++++ ++.+|.+|+||||+|+..|+.+++
T Consensus       142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v  221 (278)
T 1dcq_A          142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECL  221 (278)
T ss_dssp             CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred             ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence            9999999999998852     34588999999999999   89999999999999 889999999999999999999999


Q ss_pred             HHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccch
Q 037666          140 LRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPK  185 (375)
Q Consensus       140 ~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~  185 (375)
                      +.|+++ |.+++.+|.+|+||||+|+..++.       +++++|..
T Consensus       222 ~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~-------~~v~~Ll~  259 (278)
T 1dcq_A          222 KLLLRG-KASIEIANESGETPLDIAKRLKHE-------HCEELLTQ  259 (278)
T ss_dssp             HHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHHHHH
T ss_pred             HHHHHc-CCCCCCccCCCCCHHHHHHHcCCH-------HHHHHHHH
Confidence            999997 999999999999999999999988       88888843

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.78  E-value=4.3e-19  Score=137.75  Aligned_cols=90  Identities=24%  Similarity=0.240  Sum_probs=81.0

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHH
Q 037666           18 ITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVR   97 (375)
Q Consensus        18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~   97 (375)
                      .|.+|.||||+|+..|+.+++++|+++  +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+
T Consensus        20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~   96 (110)
T 2zgd_A           20 MGSDLGKKLLEAARAGQDDEVRILMAN--GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFDI   96 (110)
T ss_dssp             --CCHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred             cCCccchHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHHH
Confidence            378899999999999999999999998  7889999999999999999999999999999999886 7889999999999


Q ss_pred             HHHcCcHHHHHHH
Q 037666           98 AAALGQRQTVVLL  110 (375)
Q Consensus        98 Aa~~g~~~iv~~L  110 (375)
                      |+..|+.+++++|
T Consensus        97 A~~~~~~~~~~~L  109 (110)
T 2zgd_A           97 SIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHTCHHHHHHH
T ss_pred             HHHcCCHHHHHHh
Confidence            9999999998876

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.73  E-value=6.5e-18  Score=131.00  Aligned_cols=95  Identities=20%  Similarity=0.108  Sum_probs=82.4

Q ss_pred             hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhH
Q 037666           47 TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIE  125 (375)
Q Consensus        47 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t  125 (375)
                      +......|.+|.||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..|+.+++++|+++++ ++.+|..|+|
T Consensus        14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t   92 (110)
T 2zgd_A           14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKT   92 (110)
T ss_dssp             --------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCc
Confidence            3456678899999999999999999999999999986 8889999999999999999999999999998 8889999999


Q ss_pred             HHHHHHhcCcHHHHHHH
Q 037666          126 LLVKLIETDLYAVALRL  142 (375)
Q Consensus       126 ~Lh~A~~~~~~~~v~~L  142 (375)
                      |||+|+..|+.+++++|
T Consensus        93 pl~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           93 AFDISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHHHHHTCHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHh
Confidence            99999999999998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	375
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-09
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-08
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-07
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-04
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	7e-04
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-08
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-04
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-04
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	4e-04
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	6e-08
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-07
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	6e-06
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	7e-05
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-04
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-07
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.001
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	7e-07
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	6e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	9e-04
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	8e-07
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	7e-06
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-04
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	7e-04
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-06
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-05
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	6e-06
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	3e-04
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	0.001
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-05
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	7e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	0.001
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	0.002

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (132), Expect = 4e-09
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 3/90 (3%)

Query: 24  TALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDI 83
           T LHVA+    +  VK LL+  +       N    T    AA +G  E+ +  ++    +
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGA--SPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 59

Query: 84  AMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
                 D   P+  AA +G    V LL E 
Sbjct: 60  -NAKAKDDQTPLHCAARIGHTNMVKLLLEN 88

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 2e-08
 Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 3/150 (2%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMK 78
                T LH+AA+A   +  K LL+  +   +  K K   T    AA  G   +V+  ++
Sbjct: 30  NVKVETPLHMAARAGHTEVAKYLLQNKA--KVNAKAKDDQTPLHCAARIGHTNMVKLLLE 87

Query: 79  GNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAV 138
            N +  +      T   + A        + LL ++   +    +    L    +     V
Sbjct: 88  NNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRV 147

Query: 139 ALRLLKDRPQLATKRDRNEETALHVLARKN 168
           A  LL +R        +N  T LHV    N
Sbjct: 148 A-ELLLERDAHPNAAGKNGLTPLHVAVHHN 176

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (117), Expect = 3e-07
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           T LG + LH AAQ    D V  LLK  +     + +  G T    A   G + + +
Sbjct: 327 TKLGYSPLHQAAQQGHTDIVTLLLKNGA--SPNEVSSDGTTPLAIAKRLGYISVTD 380

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (101), Expect = 2e-05
 Identities = 35/160 (21%), Positives = 54/160 (33%), Gaps = 17/160 (10%)

Query: 16  QEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEE 75
              +  G T LH+AAQ    + V  LL   +  +L   NK G T     A  G V + + 
Sbjct: 225 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL--GNKSGLTPLHLVAQEGHVPVADV 282

Query: 76  AMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDL 135
            +K    +        T P+  A+  G  + V       K  L     +    KL  + L
Sbjct: 283 LIKHGVMVDATTRMGYT-PLHVASHYGNIKLV-------KFLLQHQADVNAKTKLGYSPL 334

Query: 136 YAVA-------LRLLKDRPQLATKRDRNEETALHVLARKN 168
           +  A       + LL        +   +  T L +  R  
Sbjct: 335 HQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLG 374

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 1e-04
 Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 3/151 (1%)

Query: 18  ITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAM 77
           +T  G T LHVAA+   +   + LL+  +        K G T    A     ++IV+  +
Sbjct: 128 MTKKGFTPLHVAAKYGKVRVAELLLERDA--HPNAAGKNGLTPLHVAVHHNNLDIVKLLL 185

Query: 78  KGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYA 137
                    P  +G  P+  AA   Q +    L +    +  +       + L   + +A
Sbjct: 186 PRGGSPH-SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHA 244

Query: 138 VALRLLKDRPQLATKRDRNEETALHVLARKN 168
             + LL  +       +++  T LH++A++ 
Sbjct: 245 EMVALLLSKQANGNLGNKSGLTPLHLVAQEG 275

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 7e-04
 Identities = 28/181 (15%), Positives = 48/181 (26%), Gaps = 32/181 (17%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLK-------------------------------MMST 47
              G T LHVA   N +D VK LL                                +   
Sbjct: 162 GKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG 221

Query: 48  EDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTV 107
                ++  G T    AA  G  E+V   +    +   +    G  P+   A  G     
Sbjct: 222 GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVA 280

Query: 108 VLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARK 167
            +L +               + +         ++ L         + +   + LH  A++
Sbjct: 281 DVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQ 340

Query: 168 N 168
            
Sbjct: 341 G 341

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 51.3 bits (121), Expect = 5e-08
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              G T + +AAQ   I+ V  L++  +   +   +    TA   A  +    IV+
Sbjct: 218 DEDGKTPIMLAAQEGRIEVVMYLIQQGA--SVEAVDATDHTARQLAQANNHHNIVD 271

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 40.9 bits (94), Expect = 1e-04
 Identities = 9/59 (15%), Positives = 18/59 (30%), Gaps = 6/59 (10%)

Query: 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAK------KNKIGCTAFFYAAGSGMVE 71
               T LH  A  +  +  ++L+   + E +A        +    T    A  +    
Sbjct: 30 PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRR 88

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 39.7 bits (91), Expect = 3e-04
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81
           G TALH AAQ + +  VK L+    +    K+++ G T    AA  G +E+V   ++   
Sbjct: 187 GRTALHYAAQVSNMPIVKYLVGEKGSNK-DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA 245

Query: 82  DIAMVPGGDGTLPIVRAAALGQRQTVVLL 110
            +  V           A A      V + 
Sbjct: 246 SVEAV-DATDHTARQLAQANNHHNIVDIF 273

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 39.3 bits (90), Expect = 4e-04
 Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 2/67 (2%)

Query: 24 TALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDI 83
          + + +  +A     + E +   S        +   T   + A +   E  E+ +      
Sbjct: 2  SPIKLHTEAAGSYAITEPITRESVN--IIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59

Query: 84 AMVPGGD 90
           +  G D
Sbjct: 60 CIAAGAD 66

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.9 bits (120), Expect = 6e-08
 Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 2/97 (2%)

Query: 18  ITNLGNTALHVAAQANCIDFVKELLKMM-STEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
           +T  G+TALH+A       F+  LL      E L  +N +G TA   AA  G    VE+ 
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64

Query: 77  MKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
                 + +   G  T   + A  +       +L + 
Sbjct: 65  YAAGAGVLVAERGGHTALHL-ACRVRAHTCACVLLQP 100

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 49.9 bits (118), Expect = 2e-07
 Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 17  EITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEA 76
            I      A  +AA+   +  +  L ++  TE +A        AF  AA +G + ++   
Sbjct: 121 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRL 180

Query: 77  MK--GNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
            +    +  AM+   +       A   G    +  L + 
Sbjct: 181 CELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC 219

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 45.3 bits (106), Expect = 6e-06
 Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 2/94 (2%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMS-TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAM-KG 79
                 VAA   C   +  L  +++  E +         AF  AA +G + ++       
Sbjct: 90  SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELA 149

Query: 80  NKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK 113
             +I  +   +       AA  G    +  L E 
Sbjct: 150 PTEIMAMIQAENYHAFRLAAENGHLHVLNRLCEL 183

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 42.2 bits (98), Expect = 7e-05
 Identities = 23/188 (12%), Positives = 49/188 (26%), Gaps = 21/188 (11%)

Query: 2   VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKM-MSTEDLAKKNKIGCTA 60
           V   + +    EI   I      A  +AA+   +  +  L ++  +      + +     
Sbjct: 141 VLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAF 200

Query: 61  FFYAAGSGMVEIVEEAMKGNKDI------AMVPGGDGTLPIVRAAALGQRQTVVLLYEKT 114
            + A G G   ++   +     +          G     P +       ++         
Sbjct: 201 RWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSN 260

Query: 115 KGSLTD----DEC------IELLVKLIETDLYAVALRLLKDRPQLATK----RDRNEETA 160
              + D     EC      +  L++  +  L      LL      A         +    
Sbjct: 261 PDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANEL 320

Query: 161 LHVLARKN 168
           L +  R  
Sbjct: 321 LRLALRLG 328

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 41.4 bits (96), Expect = 1e-04
 Identities = 10/75 (13%), Positives = 16/75 (21%), Gaps = 3/75 (4%)

Query: 3   AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKI---GCT 59
             D       +            L        +D ++ LL +   + LA    I      
Sbjct: 260 NPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANE 319

Query: 60  AFFYAAGSGMVEIVE 74
               A   G      
Sbjct: 320 LLRLALRLGNQGACA 334

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.5 bits (111), Expect = 6e-07
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 23 NTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSG 68
          N  LH A   N    V+ELL       L +K++ G     ++    
Sbjct: 1  NYPLHQACMENEFFKVQELLHSKP-SLLLQKDQDGRIPLHWSVSFQ 45

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.5 bits (85), Expect = 0.001
 Identities = 9/54 (16%), Positives = 15/54 (27%), Gaps = 1/54 (1%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEI 72
              G T L  A      D    L++     +    +  G  A   A    + + 
Sbjct: 169 DKQGWTPLFHALAEGHGDAAVLLVEKYGA-EYDLVDNKGAKAEDVALNEQVKKF 221

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.1 bits (113), Expect = 7e-07
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAG 66
           + G+T L++AA+   I  V  LL   +  D    NK G     + AG
Sbjct: 257 SNGDTCLNIAARLGNISIVDALLDYGA--DPFIANKSGLRPVDFGAG 301

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.0 bits (97), Expect = 6e-05
 Identities = 30/184 (16%), Positives = 55/184 (29%), Gaps = 21/184 (11%)

Query: 4   KDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFY 63
            D +   +  +   +   GNT LH       ++ VK L+K  S  +    + +G +    
Sbjct: 89  NDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS--NRLYGDNMGESCLVK 146

Query: 64  AAGSGMVEIVEEAMKGNKD------------------IAMVPGGDGTLPIVRAAALGQRQ 105
           A  S                                 I +  G  G     +        
Sbjct: 147 AVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMG 206

Query: 106 TVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDR-PQLATKRDRNEETALHVL 164
            +V    +   S T+++  +   K  E     +    LK     +   +D N +T L++ 
Sbjct: 207 WIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIA 266

Query: 165 ARKN 168
           AR  
Sbjct: 267 ARLG 270

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.5 bits (88), Expect = 9e-04
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 8   DKYEDEIGQEITNLGNTALHVAAQANCIDFVKEL-LKMMSTEDLAKKNKIGCTAFFYAAG 66
            K ++   Q  TN   +  +          ++ L LK +    L  ++  G T    AA 
Sbjct: 209 VKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAAR 268

Query: 67  SGMVEIVE 74
            G + IV+
Sbjct: 269 LGNISIVD 276

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 8e-07
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              G T L +A +   +  V+ LL+     ++   +  G TA   A    + +I E
Sbjct: 216 GERGKTPLILAVEKKHLGLVQRLLEQEHI-EINDTDSDGKTALLLAVELKLKKIAE 270

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 7e-06
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
           N  L  A Q   +D V++LL+  +  +  ++ + G T    A      +IVE
Sbjct: 5  DNHLLIKAVQNEDVDLVQQLLEGGANVN-FQEEEGGWTPLHNAVQMSREDIVE 56

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 3e-04
 Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 36/147 (24%)

Query: 3   AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTE-------------- 48
           A     +   E  + +   G TAL  AA+   ++ +K LL  M  +              
Sbjct: 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 188

Query: 49  ----------------------DLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMV 86
                                 D+  + + G T    A     + +V+  ++        
Sbjct: 189 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND 248

Query: 87  PGGDGTLPIVRAAALGQRQTVVLLYEK 113
              DG   ++ A  L  ++   LL ++
Sbjct: 249 TDSDGKTALLLAVELKLKKIAELLCKR 275

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 7e-04
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 13/160 (8%)

Query: 22  GNTALHVAAQANCIDFVKELL--------KMMSTEDLAKKNKIGCTAFFYAAGSGMVEIV 73
           G TA   AA    +  +K L         +  + ED  +  K G TA   AA  G VE++
Sbjct: 105 GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 164

Query: 74  E---EAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVV--LLYEKTKGSLTDDECIELLV 128
           +   + M  + +     G +  +  + ++     + +   LL      ++  +     L+
Sbjct: 165 KILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 224

Query: 129 KLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKN 168
             +E     +  RLL+         D + +TAL +     
Sbjct: 225 LAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK 264

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (108), Expect = 2e-06
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 22 GNTALHVAAQANCIDFVKELLKMMSTE--DLAKKNKIGCTAFFYA 64
          G+T LH+A     +  V  L+ +      +L   N +  T    A
Sbjct: 3  GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA 47

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (99), Expect = 3e-05
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIV 73
           G++ALH A+    +  V+ L++  +  D + KN    T    A    +++I+
Sbjct: 177 GSSALHSASGRGLLPLVRTLVRSGA--DSSLKNCHNDTPLMVARSRRVIDIL 226

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (107), Expect = 2e-06
 Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 22 GNTALHVAAQANCIDFVKELLKMMSTE--DLAKKNKIGCTAFFYA 64
          G++ LH+A          E+++ +  +   L  +N +  T    A
Sbjct: 2  GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA 46

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (99), Expect = 2e-05
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEE-AMKGN 80
           G TALH+A      D V  LLK  +  D+ +    G + +    G     I ++      
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCGA--DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 202

Query: 81  KDIAMVP 87
           +++ M+P
Sbjct: 203 ENLQMLP 209

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 45.1 bits (105), Expect = 6e-06
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMK 78
             G T LH AA     +  + L++ +   D+   NK+G TAF  A    ++  +EE  K
Sbjct: 230 YDGWTPLHAAAHWGKEEACRILVENLC--DMEAVNKVGQTAFDVAD-EDILGYLEELQK 285

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 39.7 bits (91), Expect = 3e-04
 Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 2/55 (3%)

Query: 18 ITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEI 72
          +          A  +   + V  LL+  +  D+   N  G TA   A     V++
Sbjct: 36 VKFDDGAVFLAACSSGDTEEVLRLLERGA--DINYANVDGLTALHQACIDDNVDM 88

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 37.8 bits (86), Expect = 0.001
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 19  TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
              G TALHVAA     + +K L++     D+  K+  G T    AA  G  E   
Sbjct: 196 AKSGGTALHVAAAKGYTEVLKLLIQARY--DVNIKDYDGWTPLHAAAHWGKEEACR 249

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 4e-05
 Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 2/164 (1%)

Query: 23  NTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD 82
           N  +   A +  ++ +KE +         + ++   TA  +A  +G  EIVE  ++    
Sbjct: 4   NLMVCNLAYSGKLEELKESILADK-SLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 62

Query: 83  IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRL 142
           +        +   + A+A        LL +  + +  +      L      + + +A+ L
Sbjct: 63  VNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVML 122

Query: 143 LKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKK 186
           L+        +D  E TA+H  A K            +     +
Sbjct: 123 LEGGANP-DAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQ 165

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 7e-04
 Identities = 37/182 (20%), Positives = 61/182 (33%), Gaps = 33/182 (18%)

Query: 20  NLGNTALHVAAQANCIDFVKELLKMMSTED------------------------------ 49
               TALH A  A   + V+ LL++    +                              
Sbjct: 35  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 94

Query: 50  -LAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVV 108
            +   N+ GCT   YAA     EI    ++G  +       + T     AA    +   +
Sbjct: 95  QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHI 154

Query: 109 LLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKN 168
           LLY K   ++ D E    L    + +    A +LL  +       ++ E+T L  +A+  
Sbjct: 155 LLYYKASTNIQDTEGNTPLHLACDEERVEEA-KLLVSQGASIYIENKEEKTPLQ-VAKGG 212

Query: 169 LT 170
           L 
Sbjct: 213 LG 214

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.8 bits (83), Expect = 0.001
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 22  GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
             TALH A + N  + V+  L +    D+  ++K   TAF  +  +G  ++ E
Sbjct: 100 KMTALHWATEHNHQEVVE--LLIKYGADVHTQSKFCKTAFDISIDNGNEDLAE 150

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 23  NTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVE 74
            T L +AA+    +  K LL   +  +    + +       A+     +IV 
Sbjct: 157 ETPLFLAAREGSYEASKALLDNFA--NREITDHMDRLPRDVASERLHHDIVR 206

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	375
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.97
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.97
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.97
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.96
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.96
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.96
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.95
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.95
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.95
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.95
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.95
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.94
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.94
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.94
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.94
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.93
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.92
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.92
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.92
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.91
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.91
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.91
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.91
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.9
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.89
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.88
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.88
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.88
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.85
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.84
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.82

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-35  Score=257.06  Aligned_cols=200  Identities=18%  Similarity=0.157  Sum_probs=185.4

Q ss_pred             CHHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccC
Q 037666            1 AVAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGN   80 (375)
Q Consensus         1 e~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~   80 (375)
                      |+++++|.+++.+++.+ |.+|+||||+|+..|+.+++++|++.  +......+..+.++++.|+..|+.+++++|++.+
T Consensus        17 ~~v~~~l~~~~~~~~~~-D~~G~TpLh~Aa~~g~~e~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~   93 (223)
T d1uoha_          17 EELKESILADKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQL--GVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKG   93 (223)
T ss_dssp             HHHHHHHHHCGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHH--TCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCcCcCc-CCCCCCHHHHHHHhhhhccccccccc--ccccccccccccccccccccccccchhHHHhccC
Confidence            46789999999999987 99999999999999999999999999  6777788889999999999999999999999999


Q ss_pred             CCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCc
Q 037666           81 KDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEET  159 (375)
Q Consensus        81 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T  159 (375)
                      +++ +.+|.+|.||||+|+.+|+.+++++|++++. ++.+|..|.||||+|+..++.++++.|+.. +.+++.+|.+|+|
T Consensus        94 ~d~-~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~-~~~i~~~d~~g~T  171 (223)
T d1uoha_          94 AQV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYY-KASTNIQDTEGNT  171 (223)
T ss_dssp             CCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTCCC
T ss_pred             cee-EeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhccc-cceeeeccCCCCc
Confidence            986 8899999999999999999999999999998 888999999999999999999999988877 8999999999999


Q ss_pred             HHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHHHHHHh
Q 037666          160 ALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHKELKRK  212 (375)
Q Consensus       160 ~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~~l~~~  212 (375)
                      |||+|++.++.       +++++|  .|++++.+|++|+||+++|...+.+.++.
T Consensus       172 pL~~Aa~~g~~-------~~v~~LL~~Gad~~~~d~~g~tpl~~A~~~~~~i~~~  219 (223)
T d1uoha_         172 PLHLACDEERV-------EEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKR  219 (223)
T ss_dssp             HHHHHHHTTCH-------HHHHHHHHTTCCSCCCCTTSCCHHHHCCTTHHHHHHH
T ss_pred             eeccccccCcH-------HHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHhc
Confidence            99999999988       788877  78999999999999999998777776543

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=2.3e-32  Score=242.73  Aligned_cols=179  Identities=20%  Similarity=0.183  Sum_probs=156.8

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHcCChhh---HhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChH
Q 037666           18 ITNLGNTALHVAAQANCIDFVKELLKMMSTED---LAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLP   94 (375)
Q Consensus        18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~---~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tp   94 (375)
                      +|++|+||||+||+.|+.+++++|+++  +++   ++.+|..|+||||+|+..|+.+++++|++.|+++ +.+|.+|.||
T Consensus         5 i~~~G~t~Lh~A~~~~~~~~v~~Ll~~--~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i-~~~d~~g~tp   81 (255)
T d1oy3d_           5 VTEDGDTALHLAVIHQHEPFLDFLLGF--SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTA   81 (255)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHH--HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCH
T ss_pred             CCcCCCCHHHHHHHcCCHHHHHHHHHc--CCCcccccCcCCCCCCccchHHhhcccccccccccccccc-cccccccchh
Confidence            488999999999999999999999998  655   7788899999999999999999999999999996 8899999999


Q ss_pred             HHHHHHcCcHHHHHHHHHhcc------------------------------------------------CCcccchhhHH
Q 037666           95 IVRAAALGQRQTVVLLYEKTK------------------------------------------------GSLTDDECIEL  126 (375)
Q Consensus        95 Lh~Aa~~g~~~iv~~Ll~~~~------------------------------------------------~~~~d~~g~t~  126 (375)
                      ||+|+..|+.+++++|++...                                                .+.+|.+|+||
T Consensus        82 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~Tp  161 (255)
T d1oy3d_          82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP  161 (255)
T ss_dssp             HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred             hhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCccc
Confidence            999999999999999865432                                                11234578999


Q ss_pred             HHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHH
Q 037666          127 LVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSE  204 (375)
Q Consensus       127 Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~  204 (375)
                      ||+|++.++.+++++|++......+.++..|+||||+|++.++.       +++++|  ++++++.+|++|+||+++|.+
T Consensus       162 Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~-------~~v~~Ll~~gadin~~d~~g~t~L~~A~~  234 (255)
T d1oy3d_         162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAA-------SVLELLLKAGADPTARMYGGRTPLGSALL  234 (255)
T ss_dssp             HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred             ccccccccccccccchhcccccccccccccccccccccccccHH-------HHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            99999999999999999984444445678999999999999987       888887  678999999999999999876


Q ss_pred             HH
Q 037666          205 KH  206 (375)
Q Consensus       205 ~~  206 (375)
                      ..
T Consensus       235 ~~  236 (255)
T d1oy3d_         235 RP  236 (255)
T ss_dssp             SS
T ss_pred             CC
Confidence            54

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.1e-31  Score=238.21  Aligned_cols=175  Identities=18%  Similarity=0.083  Sum_probs=154.8

Q ss_pred             HHHHHHhhCccc---cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHc
Q 037666            2 VAKDIYDKYEDE---IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMK   78 (375)
Q Consensus         2 ~v~~lL~~~~~~---~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~   78 (375)
                      ++.++|+++|++   ++.+ |..|+||||+|+..|+.+++++|+++  +++++.+|.+|+||||+|+..|+.++++.|++
T Consensus        23 ~~v~~Ll~~~a~~~~i~~~-~~~g~TpL~~A~~~g~~~iv~~Ll~~--ga~i~~~d~~g~tpL~~A~~~~~~~~~~~Ll~   99 (255)
T d1oy3d_          23 PFLDFLLGFSAGHEYLDLQ-NDLGQTALHLAAILGEASTVEKLYAA--GAGVLVAERGGHTALHLACRVRAHTCACVLLQ   99 (255)
T ss_dssp             HHHHHHHHHHTTSGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSS
T ss_pred             HHHHHHHHcCCCcccccCc-CCCCCCccchHHhhcccccccccccc--cccccccccccchhhhhhhccCchHHHHHHHh
Confidence            467788888876   5665 88999999999999999999999999  89999999999999999999999999999986


Q ss_pred             cCCCC----------------------------------------------ccccCCCCChHHHHHHHcCcHHHHHHHHH
Q 037666           79 GNKDI----------------------------------------------AMVPGGDGTLPIVRAAALGQRQTVVLLYE  112 (375)
Q Consensus        79 ~~~~~----------------------------------------------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~  112 (375)
                      .....                                              .+.+|.+|+||||+|+++|+.+++++|++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~  179 (255)
T d1oy3d_         100 PRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD  179 (255)
T ss_dssp             SCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             hccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhc
Confidence            53210                                              24578889999999999999999999999


Q ss_pred             hcc-CC-cccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhh
Q 037666          113 KTK-GS-LTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKL  187 (375)
Q Consensus       113 ~~~-~~-~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~  187 (375)
                      .+. .+ .++..|.||||+|++.++.+++++|+++ |.+++.+|++|+||||+|++.++.       ++.++|  +|++
T Consensus       180 ~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~-gadin~~d~~g~t~L~~A~~~~~~-------~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         180 AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLRPNP-------ILARLLRAHGAP  250 (255)
T ss_dssp             HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTSSCH-------HHHHHHHHTTCC
T ss_pred             ccccccccccccccccccccccccHHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCH-------HHHHHHHHcCCC
Confidence            998 44 4678899999999999999999999987 899999999999999999999988       888888  5653

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2.6e-30  Score=225.55  Aligned_cols=194  Identities=13%  Similarity=0.061  Sum_probs=173.3

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHh---chhcCCChHHHHHHHcCcHHHHHHHHc
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLA---KKNKIGCTAFFYAAGSGMVEIVEEAMK   78 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~---~~d~~g~tpLh~Aa~~g~~~iv~~Ll~   78 (375)
                      .++++|...|.+++.+ |.+|+||||+|+..|+.+++++|+++  +++++   ..|..|.+|+|+|+..+..++++.++.
T Consensus        15 ~v~~Ll~~~~~~~~~~-d~~G~TpL~~A~~~g~~~iv~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (229)
T d1ixva_          15 KVQELLHSKPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLSK--MENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD   91 (229)
T ss_dssp             HHHHHHHHCGGGTTCC-CTTSCCHHHHHHHTTCHHHHHHHHTT--CTTCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHS
T ss_pred             HHHHHHHcCCCccccc-CCCCCCHHHHHHHcCCccccchhhhh--hcccccccccccccccccccccccccccccccccc
Confidence            4677888889999987 99999999999999999999999998  66654   567789999999999999999999988


Q ss_pred             cCCCC-ccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCC
Q 037666           79 GNKDI-AMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRN  156 (375)
Q Consensus        79 ~~~~~-~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~  156 (375)
                      .+... ....+..+.||++.++..++.+++++|++.+. ....|.+|+||||.|+..|+.++++.|++..+.+++.+|.+
T Consensus        92 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~  171 (229)
T d1ixva_          92 RPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQ  171 (229)
T ss_dssp             SSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTT
T ss_pred             ccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccccccccccccccccc
Confidence            87643 24567789999999999999999999999998 77789999999999999999999999999867899999999


Q ss_pred             CCcHHHHHHHhcCCCCCCCccchhhcc---chhhHhhhcCCCCChhhhhHHH
Q 037666          157 EETALHVLARKNLTSSNQNPCGVENVV---PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       157 G~T~Lh~A~~~~~~~~~~~~~~v~~~L---~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      |+||||+|+++++.       +++++|   .|++++.+|++|+||+++|.+.
T Consensus       172 g~TpLh~A~~~~~~-------~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~~  216 (229)
T d1ixva_         172 GWTPLFHALAEGHG-------DAAVLLVEKYGAEYDLVDNKGAKAEDVALNE  216 (229)
T ss_dssp             SCCHHHHHHHTTCH-------HHHHHHHHHHCCCSCCCCTTSCCTGGGCSCH
T ss_pred             cCCchhhhcccccH-------HHHHHHHHhcCCCCCCcCCCCCCHHHHHhhH
Confidence            99999999999988       788876   3689999999999999998754

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.96  E-value=2.6e-30  Score=233.82  Aligned_cols=198  Identities=17%  Similarity=0.104  Sum_probs=147.1

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      +++.|+++|+++|.. |.+|.||||+|+..|+.++|++|+++  +.+....+..+.||||+|+..|+.++++.|++.+..
T Consensus        55 ~v~~Ll~~Gadvn~~-d~~G~T~L~~A~~~g~~eiv~~Ll~~--~~~~~~~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~  131 (291)
T d1s70b_          55 EVLRLLERGADINYA-NVDGLTALHQACIDDNVDMVKFLVEN--GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAH  131 (291)
T ss_dssp             HHHHHHHHCCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             HHHHHHHCCCCCCcc-CCCCCcHHHHHHhcCCceeeeeeccc--ccccccccccccccccccccccccchhhcccccCcc
Confidence            445555666666665 66677777777777777777777766  555566666666777777777777777777666655


Q ss_pred             CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc----------------------------CCcccchhhHHHHHHHhcC
Q 037666           83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK----------------------------GSLTDDECIELLVKLIETD  134 (375)
Q Consensus        83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~----------------------------~~~~d~~g~t~Lh~A~~~~  134 (375)
                      . ...|.+|.+|+++|+..+..+.++.++....                            ....+..|.||||.|+..|
T Consensus       132 ~-~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~  210 (291)
T d1s70b_         132 V-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKG  210 (291)
T ss_dssp             T-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred             c-ccccccCccccccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcC
Confidence            4 5566666777777666666666666554321                            1124457889999999999


Q ss_pred             cHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHHHHHHh
Q 037666          135 LYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHKELKRK  212 (375)
Q Consensus       135 ~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~~l~~~  212 (375)
                      +.++++.|++. |.++|.+|.+|+||||+|++.|+.       +++++|  +|++++.+|++|+||+++|.+...+++++
T Consensus       211 ~~~~~~~Ll~~-g~din~~~~~g~TpL~~A~~~g~~-------~iv~lLl~~Gadv~~~d~~G~TaL~~A~e~~~~~L~~  282 (291)
T d1s70b_         211 YTEVLKLLIQA-RYDVNIKDYDGWTPLHAAAHWGKE-------EACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEE  282 (291)
T ss_dssp             CHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHHH
T ss_pred             Chhhhcccccc-eecccccccCCCCHHHHHHHcCCH-------HHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999987 899999999999999999999988       888887  78899999999999999998755454443

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=3.8e-31  Score=237.21  Aligned_cols=195  Identities=15%  Similarity=0.098  Sum_probs=163.3

Q ss_pred             HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC------ChhhHhchhcCCChHHHHHHHcCcHHHHHHH
Q 037666            3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMM------STEDLAKKNKIGCTAFFYAAGSGMVEIVEEA   76 (375)
Q Consensus         3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~------~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L   76 (375)
                      +++.|.+.+.++..  +++|+||||+||..|+.++|++|+.+.      .|+++|.+|.+|+||||+|++.|+.+++++|
T Consensus        16 ~~~~l~~~~~n~~~--~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~L   93 (277)
T d2fo1e1          16 ITEPITRESVNIID--PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYL   93 (277)
T ss_dssp             CCSCCSTTTTTTCC--CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             HHHHHHhcCCCcCC--CCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeeccccccccccccccc
Confidence            44556666655432  356999999999999999998876541      1568999999999999999999999999999


Q ss_pred             HccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc----C------------------------------------
Q 037666           77 MKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK----G------------------------------------  116 (375)
Q Consensus        77 l~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~----~------------------------------------  116 (375)
                      +++|+++ +.+|.+|.||+|+|...++.++++.+.....    .                                    
T Consensus        94 l~~Gad~-n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (277)
T d2fo1e1          94 MKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKV  172 (277)
T ss_dssp             HHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCS
T ss_pred             ccccccc-ccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccc
Confidence            9999996 8899999999999999999887777654321    1                                    


Q ss_pred             --------CcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chh
Q 037666          117 --------SLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKK  186 (375)
Q Consensus       117 --------~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~  186 (375)
                              +..+..|.||||.++..++.++++.++...+.+.+.+|..|+||||+|++.+..       +++++|  .++
T Consensus       173 ~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~-------~iv~~Ll~~ga  245 (277)
T d2fo1e1         173 DYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI-------EVVMYLIQQGA  245 (277)
T ss_dssp             SCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCH-------HHHHHHHHTTC
T ss_pred             cccccccccccccCCCCccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCH-------HHHHHHHHCcC
Confidence                    112236789999999999999999988877999999999999999999999988       888887  788


Q ss_pred             hHhhhcCCCCChhhhhHHHHH
Q 037666          187 LAEAINTGGLTPTALFSEKHK  207 (375)
Q Consensus       187 ~~~~~n~~g~tpl~~a~~~~~  207 (375)
                      +++.+|++|+||+++|.+..+
T Consensus       246 din~~d~~G~T~L~~A~~~~~  266 (277)
T d2fo1e1         246 SVEAVDATDHTARQLAQANNH  266 (277)
T ss_dssp             CSSCCCSSSCCHHHHHHHTTC
T ss_pred             CCCCcCCCCCCHHHHHHHcCC
Confidence            999999999999999987653

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.8e-30  Score=223.17  Aligned_cols=175  Identities=17%  Similarity=0.089  Sum_probs=141.4

Q ss_pred             CCCcHHHHHHHcCCHHHHHH----HHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHH
Q 037666           21 LGNTALHVAAQANCIDFVKE----LLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIV   96 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~----Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh   96 (375)
                      +|+||||+|+..|+.+++++    +...  +.++|.+|.+|+||||+|+..|+.+++++|++.+++. +.+|.+|.||||
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~--~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~-~~~d~~g~t~l~   77 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGD--LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLH   77 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhC--CCCcccCCCCCCccccccccccccccccccccccccc-cccccccccccc
Confidence            58999999999998655444    4444  6778889999999999999999999999999999886 788999999999


Q ss_pred             HHHHcCcHHHHHHHHHhcc-C------CcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccc-cCCCCcHHHHHHHhc
Q 037666           97 RAAALGQRQTVVLLYEKTK-G------SLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKR-DRNEETALHVLARKN  168 (375)
Q Consensus        97 ~Aa~~g~~~iv~~Ll~~~~-~------~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~-d~~G~T~Lh~A~~~~  168 (375)
                      .|+.+|+.++++.|++.+. .      .....+|.||||.|+..++.+.+++++.. +..++.+ |.+|+||||+|++.|
T Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~G~T~L~~A~~~g  156 (221)
T d1iknd_          78 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL-GADVNAQEPCNGRTALHLAVDLQ  156 (221)
T ss_dssp             HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTT
T ss_pred             cccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeeccc-CcccccccccCCCCccccccccc
Confidence            9999999999999988765 1      12445678999999999999999888887 5555554 567999999999998


Q ss_pred             CCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          169 LTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       169 ~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ..       ++.++|  ++++++.+|.+|+||+++|.+..
T Consensus       157 ~~-------~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~  189 (221)
T d1iknd_         157 NP-------DLVSLLLKCGADVNRVTYQGYSPYQLTWGRP  189 (221)
T ss_dssp             CH-------HHHHHHHTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred             cH-------HHHHHHHhcCCcccccCCCCCCHHHHHHHCC
Confidence            87       777777  77888999999999999987543

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.95  E-value=1.2e-28  Score=211.72  Aligned_cols=195  Identities=19%  Similarity=0.157  Sum_probs=167.0

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      |++++|+++|+|+|.+.|.+|+||||+||..|+.|++++|++.  +.+++.+|..+.++++.++..++............
T Consensus         3 ~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~--g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (209)
T d1ot8a_           3 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDA--GADANSQDNTGRTPLHAAVAADAMGVFQILLRNRA   80 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTT
T ss_pred             HHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhh--ccccccccccccccccccccccccccccccccccc
Confidence            6889999999999986689999999999999999999999999  88999999999999999999999887777766655


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      .........|.++.+.+.........+.|.+.+. .+.++..|+||||.++.++..++++.++.. +.+++.+|.+|+||
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~-~~~~~~~d~~g~Tp  159 (209)
T d1ot8a_          81 TNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMH-HANRDAQDDKDETP  159 (209)
T ss_dssp             CCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCH
T ss_pred             cccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccc-cccccccccccccc
Confidence            5445566678888888888888888888888877 777888888899998888888888888887 77788888888999


Q ss_pred             HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ||+|+..|+.       +++++|  .+++++.+|.+|+||+++|.++.
T Consensus       160 L~~A~~~g~~-------~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~  200 (209)
T d1ot8a_         160 LFLAAREGSY-------EASKALLDNFANREITDHMDRLPRDVASERL  200 (209)
T ss_dssp             HHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             cchhccccHH-------HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence            9998888877       777776  67788888888899988887654

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.3e-28  Score=211.12  Aligned_cols=175  Identities=21%  Similarity=0.185  Sum_probs=161.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHc
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAAL  101 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~  101 (375)
                      +++.||.+|..|+.+.++.+++.. +.+++.+|.+|+||||+|+..|+.+++++|++.+.+. ...+..+.++++.++..
T Consensus         3 ~~~~~~~~a~~G~~~~v~~~l~~~-~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~   80 (223)
T d1uoha_           3 SNLMVCNLAYSGKLEELKESILAD-KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASA   80 (223)
T ss_dssp             SSSHHHHHHHTTCHHHHHHHHHHC-GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTCCCHHHHHHHH
T ss_pred             CHHHHHHHHHhCCHHHHHHHHHhC-CCcCcCcCCCCCCHHHHHHHhhhhccccccccccccc-ccccccccccccccccc
Confidence            578999999999999999988876 8899999999999999999999999999999998875 67788899999999999


Q ss_pred             CcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchh
Q 037666          102 GQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVE  180 (375)
Q Consensus       102 g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~  180 (375)
                      |+.+++++|++++. ++.+|.+|+||||+|+.+++.++++.|+++ |.+++.+|.+|.||||+|+..+..       ++.
T Consensus        81 ~~~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~-g~d~~~~~~~~~t~L~~a~~~~~~-------~~~  152 (223)
T d1uoha_          81 GRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG-GANPDAKDHYEATAMHRAAAKGNL-------KMI  152 (223)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHH
T ss_pred             cccchhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCccchhhhhcCCc-------chh
Confidence            99999999999998 888999999999999999999999999987 899999999999999999999877       777


Q ss_pred             hcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          181 NVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       181 ~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      +++  .+.+++.+|.+|+||+++|+...
T Consensus       153 ~~L~~~~~~i~~~d~~g~TpL~~Aa~~g  180 (223)
T d1uoha_         153 HILLYYKASTNIQDTEGNTPLHLACDEE  180 (223)
T ss_dssp             HHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred             hhhccccceeeeccCCCCceeccccccC
Confidence            776  67788999999999999987653

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-27  Score=205.19  Aligned_cols=178  Identities=15%  Similarity=0.160  Sum_probs=151.0

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcC--ChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHH
Q 037666           20 NLGNTALHVAAQANCIDFVKELLKMM--STEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVR   97 (375)
Q Consensus        20 ~~g~tpLh~A~~~g~~~~v~~Ll~~~--~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~   97 (375)
                      .+|+||||+||..|+.++++.|++..  .+.+++.+|.+|+||||+|+..|+.++++.|++.+++. +..+.+|.++++.
T Consensus         1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~-~~~~~~~~~~~~~   79 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHL   79 (228)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhcccccccccccccccccc-ccccccccccccc
Confidence            36999999999999999999998631  16789999999999999999999999999999998885 7788888899998


Q ss_pred             HHHcCcHHHHHHHHHhcc---------------------------------------CCcccchhhHHHHHHHhcCcHHH
Q 037666           98 AAALGQRQTVVLLYEKTK---------------------------------------GSLTDDECIELLVKLIETDLYAV  138 (375)
Q Consensus        98 Aa~~g~~~iv~~Ll~~~~---------------------------------------~~~~d~~g~t~Lh~A~~~~~~~~  138 (375)
                      |...++.++++.......                                       ....+..|.++|+.|+..+..++
T Consensus        80 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~  159 (228)
T d1k1aa_          80 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSM  159 (228)
T ss_dssp             HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred             ccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhh
Confidence            888888777666544322                                       11122367899999999999999


Q ss_pred             HHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          139 ALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       139 v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ++.+++. +...+.+|.+|+||||+|+..|+.       ++.++|  .|++++.+|.+|+||+++|.+..
T Consensus       160 ~~~~~~~-~~~~~~~d~~g~t~L~~A~~~g~~-------~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~  221 (228)
T d1k1aa_         160 VQLLLQH-GANVNAQMYSGSSALHSASGRGLL-------PLVRTLVRSGADSSLKNCHNDTPLMVARSRR  221 (228)
T ss_dssp             HHHHHHT-TCCTTCBCTTSCBHHHHHHHHTCH-------HHHHHHHHTTCCTTCCCTTSCCTTTTCSSHH
T ss_pred             hhhhhhh-ccccccccccCcchHHHHHHcCCH-------HHHHHHHHCCCCCCCCCCCCCCHHHHHHhCC
Confidence            9999987 888999999999999999999988       888887  77899999999999999997654

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-28  Score=214.43  Aligned_cols=169  Identities=15%  Similarity=0.044  Sum_probs=147.2

Q ss_pred             HHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCC
Q 037666            4 KDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDI   83 (375)
Q Consensus         4 ~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~   83 (375)
                      .+.+..+|.++|.+ |.+|+||||+|+..|+.+++++|++.  +++++.+|..|.||||+|+..|+.++++.|++.+...
T Consensus        22 i~~~~~~~~~in~~-d~~g~TpLh~A~~~~~~~iv~~L~~~--g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~   98 (221)
T d1iknd_          22 IRQVKGDLAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGA--GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTP   98 (221)
T ss_dssp             CC-----CCCCCCC-CTTCCCHHHHHHHTTCHHHHHCCCSC--CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTT
T ss_pred             HHHHHhCCCCcccC-CCCCCccccccccccccccccccccc--cccccccccccccccccccccccccccchhhhhcccc
Confidence            34566789999987 99999999999999999999999999  8999999999999999999999999999999875432


Q ss_pred             -----ccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCc-ccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCC
Q 037666           84 -----AMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSL-TDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRN  156 (375)
Q Consensus        84 -----~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~-~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~  156 (375)
                           ......+|.||||.|+..|+.++++++++.+. .+. .+.+|.||||.|++.|+.+++++|++. |.+++.+|.+
T Consensus        99 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~-gad~~~~~~~  177 (221)
T d1iknd_          99 HLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC-GADVNRVTYQ  177 (221)
T ss_dssp             SSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT-TCCSCCCCTT
T ss_pred             cccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhc-CCcccccCCC
Confidence                 23455678999999999999999999999988 544 557899999999999999999999987 9999999999


Q ss_pred             CCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666          157 EETALHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       157 G~T~Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      |+||||+|++.++.       ++.+.|
T Consensus       178 G~tpl~~A~~~~~~-------~~~~~l  197 (221)
T d1iknd_         178 GYSPYQLTWGRPST-------RIQQQL  197 (221)
T ss_dssp             CCCGGGGCTTSSCH-------HHHHHH
T ss_pred             CCCHHHHHHHCCCH-------HHHHHH
Confidence            99999999999877       677665

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.95  E-value=1.2e-27  Score=214.17  Aligned_cols=170  Identities=16%  Similarity=0.104  Sum_probs=149.1

Q ss_pred             HHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC---
Q 037666            5 DIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK---   81 (375)
Q Consensus         5 ~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~---   81 (375)
                      +.+++.|+|+|.+ |.+|+||||+|+..|+.++|++|+++  |++++.+|.+|.||||+|+..|+.++++.+.....   
T Consensus        58 ~~~l~~Gadvn~~-d~~G~TpLh~A~~~g~~~iv~~Ll~~--Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~  134 (277)
T d2fo1e1          58 KECIAAGADVNAM-DCDENTPLMLAVLARRRRLVAYLMKA--GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKG  134 (277)
T ss_dssp             HHHHHTCCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred             hHHHHcCCCcccc-CCCCCeeecccccccccccccccccc--ccccccccccccccccchhhhcchhhhhhhhhcccccc
Confidence            3446789999997 99999999999999999999999999  89999999999999999999999988888765310   


Q ss_pred             -------------------------------------------CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc--C
Q 037666           82 -------------------------------------------DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK--G  116 (375)
Q Consensus        82 -------------------------------------------~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~--~  116 (375)
                                                                 ......+.+|.||||.++..++.+++++++....  .
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~  214 (277)
T d2fo1e1         135 DIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK  214 (277)
T ss_dssp             TTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT
T ss_pred             cccccccccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCccccccccccccccccccccccccc
Confidence                                                       0013456679999999999999999998776665  6


Q ss_pred             CcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccch
Q 037666          117 SLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPK  185 (375)
Q Consensus       117 ~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~  185 (375)
                      +.+|..|+||||+|++.|+.+++++|++. |.++|.+|.+|+||||+|+++|+.       +++++|.+
T Consensus       215 ~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~-gadin~~d~~G~T~L~~A~~~~~~-------~iv~lL~~  275 (277)
T d2fo1e1         215 DKQDEDGKTPIMLAAQEGRIEVVMYLIQQ-GASVEAVDATDHTARQLAQANNHH-------NIVDIFDR  275 (277)
T ss_dssp             TCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCSSSCCHHHHHHHTTCH-------HHHHHHHT
T ss_pred             cccCCCCCCHHHHHHHcCCHHHHHHHHHC-cCCCCCcCCCCCCHHHHHHHcCCH-------HHHHHHHH
Confidence            66899999999999999999999999997 999999999999999999999988       88887743

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.9e-28  Score=197.51  Aligned_cols=149  Identities=20%  Similarity=0.143  Sum_probs=141.2

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCc
Q 037666           24 TALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQ  103 (375)
Q Consensus        24 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~  103 (375)
                      +|||+||..|+.++|+.|+++  +.+++.+|.+|+||||+|+ .|+.+++++|++.+++. +.++.+|.+|++.++..++
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~--g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~-~~~~~~~~~~l~~~~~~~~   78 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQN--NVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGF   78 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTS--CCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC
T ss_pred             HHHHHHHHcCCHHHHHHHHHC--CCCcCccCCcccccccccc-ccccccccccccccccc-ccccccCcccccccccccc
Confidence            899999999999999999999  8999999999999999886 79999999999999996 8899999999999999999


Q ss_pred             HHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhc
Q 037666          104 RQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENV  182 (375)
Q Consensus       104 ~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~  182 (375)
                      .+.++.+++.+. .+..|..|.+|+|.|+..++.++++.|+++.+.+.+.+|.+|+||||+|++.++.       +++++
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~-------~iv~~  151 (156)
T d1ihba_          79 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRN-------EVVSL  151 (156)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCH-------HHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCH-------HHHHH
Confidence            999999999988 8889999999999999999999999999997779999999999999999999987       88877


Q ss_pred             c
Q 037666          183 V  183 (375)
Q Consensus       183 L  183 (375)
                      |
T Consensus       152 L  152 (156)
T d1ihba_         152 M  152 (156)
T ss_dssp             H
T ss_pred             H
Confidence            6

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=3.7e-27  Score=192.48  Aligned_cols=150  Identities=17%  Similarity=0.111  Sum_probs=138.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHc
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAAL  101 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~  101 (375)
                      ..||||.||+.|+.++|+.||++  +++++ .|..|+||||+|+..++.++++.++...... ...+..+.++++.++..
T Consensus         2 ~~t~L~~Aa~~g~~~~v~~LL~~--ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   77 (153)
T d1awcb_           2 LGKKLLEAARAGQDDEVRILMAN--GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE   77 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHH--TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHc--CCCcc-cccCCCccccccccccccccccccccccccc-ccccccccccccccccc
Confidence            34999999999999999999999  67766 6899999999999999999999999988775 66778889999999999


Q ss_pred             CcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchh
Q 037666          102 GQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVE  180 (375)
Q Consensus       102 g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~  180 (375)
                      .+.+.++++++.+. .+.+|.+|.||||+|+..|+.+++++|++. |.+++.+|.+|+||||+|+++|+.       ++.
T Consensus        78 ~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~-gad~~~~d~~g~Tpl~~A~~~g~~-------eiv  149 (153)
T d1awcb_          78 GHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY-GADVHTQSKFCKTAFDISIDNGNE-------DLA  149 (153)
T ss_dssp             TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHH
T ss_pred             ccceeeecccccCCccccccccCchHHHhhhhcchhheeeecccc-ccCCcccCCCCCCHHHHHHHcCCH-------HHH
Confidence            99999999999988 778999999999999999999999999888 999999999999999999999988       888


Q ss_pred             hcc
Q 037666          181 NVV  183 (375)
Q Consensus       181 ~~L  183 (375)
                      ++|
T Consensus       150 ~lL  152 (153)
T d1awcb_         150 EIL  152 (153)
T ss_dssp             HHH
T ss_pred             HhC
Confidence            765

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.5e-27  Score=209.09  Aligned_cols=197  Identities=20%  Similarity=0.174  Sum_probs=151.0

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-------------------------------hhhH
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMS-------------------------------TEDL   50 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~-------------------------------~~~~   50 (375)
                      +++++|+++|+++|.+.+..|+||||+|+..|+.++++.|++...                               ..+.
T Consensus        19 e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (285)
T d1wdya_          19 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV   98 (285)
T ss_dssp             HHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred             HHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcCCccccchhhhhcccc
Confidence            467888899999998867789999999999999999999998641                               0011


Q ss_pred             hchhcCCChHHHHHHHcCcHHHHHHHHccCCCC---------ccccCCCCChHHHHHHHcCcHHHHHHHHHhcc--CCcc
Q 037666           51 AKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDI---------AMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK--GSLT  119 (375)
Q Consensus        51 ~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~---------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~--~~~~  119 (375)
                      ...+..|.|+++.|+..|+...++.+++...+.         ....+..|.||||+|+++|+.+++++|+++..  ++..
T Consensus        99 ~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~  178 (285)
T d1wdya_          99 NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC  178 (285)
T ss_dssp             TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCC
T ss_pred             cccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccc
Confidence            123456778888888888888888777654332         23467788999999999999999999987644  6667


Q ss_pred             cchhhHHHHHHHh----cCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc---chhhHhhhc
Q 037666          120 DDECIELLVKLIE----TDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV---PKKLAEAIN  192 (375)
Q Consensus       120 d~~g~t~Lh~A~~----~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L---~~~~~~~~n  192 (375)
                      +..|.++++.+..    .+..+++++|+++ |.+++.+|.+|+||||.|++.++.       ++++++   .+.+++.+|
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~-ga~~n~~~~~g~t~L~~a~~~~~~-------~~v~~lL~~~g~din~~d  250 (285)
T d1wdya_         179 DNMGRNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHL-------GLVQRLLEQEHIEINDTD  250 (285)
T ss_dssp             CTTSCCHHHHHHHCSCTTTHHHHHHHHHHT-TCCSSCCCTTSCCHHHHHHHTTCH-------HHHHHHHHSSSCCTTCCC
T ss_pred             cCCCCcccccccccccchHHHHHHHHHHHC-CCCCCccCCCCCCccchhhhcCcH-------HHHHHHHHcCCCCCcCCC
Confidence            7777776665543    3445677888877 888888888999999999988876       666655   467888888


Q ss_pred             CCCCChhhhhHHHH
Q 037666          193 TGGLTPTALFSEKH  206 (375)
Q Consensus       193 ~~g~tpl~~a~~~~  206 (375)
                      .+|.||+++|.+..
T Consensus       251 ~~G~TpL~~A~~~~  264 (285)
T d1wdya_         251 SDGKTALLLAVELK  264 (285)
T ss_dssp             TTSCCHHHHHHHTT
T ss_pred             CCCCCHHHHHHHcC
Confidence            89999999888654

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.9e-27  Score=192.24  Aligned_cols=149  Identities=21%  Similarity=0.166  Sum_probs=137.3

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCc
Q 037666           24 TALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQ  103 (375)
Q Consensus        24 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~  103 (375)
                      +.||.||..|+.++|++|++.. +.+++.+|..|+||||+|+. |+.++++.|++.+.++ +.++..|.+|++.++..++
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~-~~~~n~~d~~g~t~L~~A~~-~~~~~v~~Ll~~~~~~-~~~~~~~~~~l~~~~~~~~   80 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRE-LVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGF   80 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTT-CCCTTCCCTTSCCHHHHSCT-TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred             HHHHHHHHcCCHHHHHHHHHhC-CCCCCccCCCCCcccccccc-cccccccccccccccc-ccccccccccccccccccc
Confidence            4599999999999999999986 78899999999999999875 8899999999999986 8889999999999999999


Q ss_pred             HHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhc
Q 037666          104 RQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENV  182 (375)
Q Consensus       104 ~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~  182 (375)
                      .++++.+++.++ ++.+|.+|+||||+|++.|+.+++++|+ . +.+++.+|.+|+||||+|++.|+.       +++++
T Consensus        81 ~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~-~~~~~~~d~~G~TpL~~A~~~g~~-------~iv~~  151 (156)
T d1bd8a_          81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-A-ESDLHRRDARGLTPLELALQRGAQ-------DLVDI  151 (156)
T ss_dssp             HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-T-TSCTTCCCTTSCCHHHHHHHSCCH-------HHHHH
T ss_pred             ccccccccccccccccccCCCCeeecccccccccccccccc-c-cccccccCCCCCCHHHHHHHcCCH-------HHHHH
Confidence            999999999998 8889999999999999999999998776 4 788999999999999999999988       88877


Q ss_pred             cc
Q 037666          183 VP  184 (375)
Q Consensus       183 L~  184 (375)
                      |.
T Consensus       152 Ll  153 (156)
T d1bd8a_         152 LQ  153 (156)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.4e-26  Score=201.50  Aligned_cols=175  Identities=19%  Similarity=0.195  Sum_probs=155.9

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCC--ccccCCCCChHHHHHHH
Q 037666           23 NTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDI--AMVPGGDGTLPIVRAAA  100 (375)
Q Consensus        23 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~--~~~~d~~g~tpLh~Aa~  100 (375)
                      +||||+||+.|+.+.++.|++.. +.+++.+|.+|+||||+|+..|+.+++++|++.++++  ....|..|.+|+|+++.
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~-~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~   79 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSK-PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS   79 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHC-GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CHhHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCCCHHHHHHHcCCccccchhhhhhcccccccccccccccccccccc
Confidence            58999999999999999999976 8899999999999999999999999999999998764  24567889999999999


Q ss_pred             cCcHHHHHHHHHhcc---CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCcc
Q 037666          101 LGQRQTVVLLYEKTK---GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPC  177 (375)
Q Consensus       101 ~g~~~iv~~Ll~~~~---~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~  177 (375)
                      .+..++++.++..+.   ....+..+.++++.++..++.++++.++.. +...+.+|.+|+||||+|+..++.       
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-~~~~~~~~~~g~t~l~~a~~~~~~-------  151 (229)
T d1ixva_          80 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSL-------  151 (229)
T ss_dssp             HTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCH-------
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhhhhhhhhh-cccccccCCCCCCccchhhhcccc-------
Confidence            999999999988876   334677899999999999999999999887 888899999999999999999977       


Q ss_pred             chhhcc--c-hhhHhhhcCCCCChhhhhHHHH
Q 037666          178 GVENVV--P-KKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       178 ~v~~~L--~-~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      ++.+.|  . +.+++.+|.+|+||+++|.+..
T Consensus       152 ~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~  183 (229)
T d1ixva_         152 KLIELLCGLGKSAVNWQDKQGWTPLFHALAEG  183 (229)
T ss_dssp             HHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTT
T ss_pred             cccccccccccccccccccccCCchhhhcccc
Confidence            777666  2 3677899999999999998764

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-26  Score=218.76  Aligned_cols=193  Identities=19%  Similarity=0.165  Sum_probs=165.6

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhc-----------------------------
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAK-----------------------------   52 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-----------------------------   52 (375)
                      ++.+.|.+++.+++.. +.+|.+|||+|+..|+.+++++|+++  +.+++.                             
T Consensus       146 ~~v~~ll~~~~~~~~~-~~~~~~~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~  222 (408)
T d1n11a_         146 RVAELLLERDAHPNAA-GKNGLTPLHVAVHHNNLDIVKLLLPR--GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG  222 (408)
T ss_dssp             HHHHHHHHTTCCTTCC-CSSCCCHHHHHHHTTCHHHHHHHGGG--TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHcCCCCCcC-CCcCchHHHHHHHcCCHHHHHHHHhc--CCcccccCCCCCCcchhhhccchhhhhhhhhhccc
Confidence            4567788889999887 88999999999999999999999987  444443                             


Q ss_pred             ----hhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHH
Q 037666           53 ----KNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELL  127 (375)
Q Consensus        53 ----~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~L  127 (375)
                          .+..|.||||+|+..++.++++.+++..... +..|..|.||+|.|+..++.+++++|++++. .+..+..+.|||
T Consensus       223 ~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L  301 (408)
T d1n11a_         223 SANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPL  301 (408)
T ss_dssp             CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHH
T ss_pred             cccccCCCCCCHHHHHHHhCcHhHhhhhhcccccc-ccccCCCCChhhhhhhcCcHHHHHHHHHCCCccccccccccccc
Confidence                3445666777777777788888888777765 6778889999999999999999999999888 777888899999


Q ss_pred             HHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666          128 VKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK  205 (375)
Q Consensus       128 h~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~  205 (375)
                      |.++..++.++++.+++. |.++|.+|.+|+||||+|+++|+.       +++++|  +|++++.+|++|+||+++|.+.
T Consensus       302 ~~~~~~~~~~~~~~ll~~-g~~in~~d~~G~T~Lh~A~~~g~~-------~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~  373 (408)
T d1n11a_         302 HVASHYGNIKLVKFLLQH-QADVNAKTKLGYSPLHQAAQQGHT-------DIVTLLLKNGASPNEVSSDGTTPLAIAKRL  373 (408)
T ss_dssp             HHHHHSSCSHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHHHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred             hhhcccCcceeeeeeccc-cccccccCCCCCCHHHHHHHcCCH-------HHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence            999999999999999987 899999999999999999999988       888877  8899999999999999999876


Q ss_pred             H
Q 037666          206 H  206 (375)
Q Consensus       206 ~  206 (375)
                      .
T Consensus       374 ~  374 (408)
T d1n11a_         374 G  374 (408)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=2.8e-27  Score=215.42  Aligned_cols=182  Identities=14%  Similarity=0.082  Sum_probs=127.3

Q ss_pred             hCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcH-------HHHHHHHccCC
Q 037666            9 KYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMV-------EIVEEAMKGNK   81 (375)
Q Consensus         9 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~-------~iv~~Ll~~~~   81 (375)
                      ..+.++|..+|.+|+||||+||..|+.++|+.|+++  +++++.+|..|+||||.|+..++.       ++++.+..   
T Consensus        94 ~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~--gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~---  168 (301)
T d1sw6a_          94 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKH--GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---  168 (301)
T ss_dssp             TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---
T ss_pred             ccCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhh---
Confidence            356788877799999999999999999999999999  899999999999999999987763       44444433   


Q ss_pred             CCccccCCCCChHHHHHHHcCc----HH--------HHHHHHHhcc--CCcccchhhHHHHHHHhcCcHHHHHHHHh--c
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQ----RQ--------TVVLLYEKTK--GSLTDDECIELLVKLIETDLYAVALRLLK--D  145 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~----~~--------iv~~Ll~~~~--~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~--~  145 (375)
                      . ...+|..|+||||.++..+.    .+        +++++.+.+.  .......+.++++.+........+..+..  .
T Consensus       169 ~-~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (301)
T d1sw6a_         169 C-LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI  247 (301)
T ss_dssp             G-GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHH
T ss_pred             h-hhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHH
Confidence            2 36678999999999887554    22        3344445444  22244556666666655443333322111  0


Q ss_pred             CCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhH
Q 037666          146 RPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFS  203 (375)
Q Consensus       146 ~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~  203 (375)
                      .+..+|.+|.+|+||||+|+++|+.       +++++|  .|++++.+|++|+||+++|+
T Consensus       248 ~~~~in~~D~~G~TpLh~A~~~g~~-------~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         248 IANMLNAQDSNGDTCLNIAARLGNI-------SIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             HHHTTTCCCTTSCCHHHHHHHHCCH-------HHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             HhcCccCCCCCCCCHHHHHHHcCCH-------HHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence            1234789999999999999999988       888887  78999999999999999874

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.3e-25  Score=211.93  Aligned_cols=192  Identities=21%  Similarity=0.186  Sum_probs=153.1

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++++.|+++|+++|.. |.+|+||||+|++.|+.+++++|+++  |++++.+|.+|+||||+|+..|+.++++.|++..+
T Consensus        14 ~~v~~Ll~~g~~in~~-d~~g~TpL~~A~~~g~~~iv~~Ll~~--gadi~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~   90 (408)
T d1n11a_          14 PIVKNLLQRGASPNVS-NVKVETPLHMAARAGHTEVAKYLLQN--KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNA   90 (408)
T ss_dssp             HHHHHHHHTTCCSCCS-SSCCCCHHHHHHHHTCHHHHHHHHHH--TCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred             HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC--cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Confidence            4677778889999987 88999999999999999999999998  78899999999999999999999999998886544


Q ss_pred             CC--------------------------------ccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHH
Q 037666           82 DI--------------------------------AMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLV  128 (375)
Q Consensus        82 ~~--------------------------------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh  128 (375)
                      +.                                ...+|.++.++++.|+..++.++++.|++.+. ++..+.+|.+|||
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~L~  170 (408)
T d1n11a_          91 NPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLH  170 (408)
T ss_dssp             CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHH
T ss_pred             ccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCcCchHHH
Confidence            32                                13456778899999999999999999998888 7778888999999


Q ss_pred             HHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHH
Q 037666          129 KLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSE  204 (375)
Q Consensus       129 ~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~  204 (375)
                      .|+..++.++++.|+.+ |.+++..|.+|.||+|.+......       +....+  ........+.+|.||++++.+
T Consensus       171 ~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~t~l~~a~~  240 (408)
T d1n11a_         171 VAVHHNNLDIVKLLLPR-GGSPHSPAWNGYTPLHIAAKQNQV-------EVARSLLQYGGSANAESVQGVTPLHLAAQ  240 (408)
T ss_dssp             HHHHTTCHHHHHHHGGG-TCCSCCCCTTCCCHHHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHhc-CCcccccCCCCCCcchhhhccchh-------hhhhhhhhccccccccCCCCCCHHHHHHH
Confidence            99999999999888887 788888888999999988877654       333333  223334445556666666543

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.3e-25  Score=182.68  Aligned_cols=139  Identities=20%  Similarity=0.237  Sum_probs=127.6

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      .|+++|.+++.++|.. |..|+||||+|+ .|+.+++++|+++  +.+++..+..|.+|++.++..++.++++.+++.++
T Consensus        17 ~vk~lL~~~~~~~n~~-d~~g~t~L~~A~-~~~~~~v~~Ll~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~   92 (156)
T d1bd8a_          17 EVRRLLHRELVHPDAL-NRFGKTALQVMM-FGSTAIALELLKQ--GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGA   92 (156)
T ss_dssp             HHHHHHHTTCCCTTCC-CTTSCCHHHHSC-TTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHHHHHHhCCCCCCcc-CCCCCccccccc-ccccccccccccc--ccccccccccccccccccccccccccccccccccc
Confidence            5677888889999997 999999999987 4889999999999  78899999999999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhccCCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      ++ +.+|.+|.||||+|++.|+.+++++|++....+.+|.+|+||||+|++.|+.++++.|+++
T Consensus        93 ~~-n~~~~~~~t~L~~A~~~~~~~i~~~L~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          93 DV-NVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             CS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             cc-ccccCCCCeeeccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            86 7899999999999999999999998885333888999999999999999999999999875

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.92  E-value=8.2e-26  Score=203.90  Aligned_cols=177  Identities=20%  Similarity=0.157  Sum_probs=158.1

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHH
Q 037666           20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAA   99 (375)
Q Consensus        20 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa   99 (375)
                      .+|.||||.||..|+.++|++|+++  |+++|.+|.+|+||||+|+..|+.+++++|++.+.+. ...+..+.+|||.|+
T Consensus        38 ~~~~t~l~~A~~~G~~~~v~~Ll~~--Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~-~~~~~~~~~~L~~a~  114 (291)
T d1s70b_          38 FDDGAVFLAACSSGDTEEVLRLLER--GADINYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAA  114 (291)
T ss_dssp             ECHHHHHHHHHHHTCHHHHHHHHHH--CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred             CCCchHHHHHHHcCCHHHHHHHHHC--CCCCCccCCCCCcHHHHHHhcCCceeeeeeccccccc-ccccccccccccccc
Confidence            3456999999999999999999999  8999999999999999999999999999999999885 778899999999999


Q ss_pred             HcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCc--------------------------cccc
Q 037666          100 ALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQ--------------------------LATK  152 (375)
Q Consensus       100 ~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~--------------------------~~~~  152 (375)
                      ..++.++++.|++.+. .+..|.++.+++++|+..++.+.++.++...+.                          ....
T Consensus       115 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (291)
T d1s70b_         115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR  194 (291)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred             cccccchhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhccccccccc
Confidence            9999999999999998 778899999999999999988888887754222                          2345


Q ss_pred             ccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          153 RDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       153 ~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      .+.+|.||||.|+..++.       ++.+.|  .+++++.++.+|.||+++|++..
T Consensus       195 ~~~~g~t~L~~a~~~~~~-------~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g  243 (291)
T d1s70b_         195 HAKSGGTALHVAAAKGYT-------EVLKLLIQARYDVNIKDYDGWTPLHAAAHWG  243 (291)
T ss_dssp             CTTTCCCHHHHHHHHTCH-------HHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             ccCCCCChhhHHHHcCCh-------hhhcccccceecccccccCCCCHHHHHHHcC
Confidence            688999999999999987       777776  67889999999999999998753

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.8e-25  Score=199.36  Aligned_cols=181  Identities=20%  Similarity=0.150  Sum_probs=147.0

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchh-cCCChHHHHHHHcCcHHHHHHHHccCCCC----------------
Q 037666           21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKN-KIGCTAFFYAAGSGMVEIVEEAMKGNKDI----------------   83 (375)
Q Consensus        21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d-~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~----------------   83 (375)
                      +++|+||.|++.|+.|+|++|+++  |++++.++ ..|+||||+|+..|+.+++++|++.++..                
T Consensus         4 ~~~~~L~~Ai~~~~~e~vk~Ll~~--G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~   81 (285)
T d1wdya_           4 EDNHLLIKAVQNEDVDLVQQLLEG--GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAI   81 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCcHHHHHHHHcCCHHHHHHHHHC--CCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhh
Confidence            368999999999999999999999  89998765 57999999999999999999999876543                


Q ss_pred             ----------------ccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCc----------ccchhhHHHHHHHhcCcH
Q 037666           84 ----------------AMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSL----------TDDECIELLVKLIETDLY  136 (375)
Q Consensus        84 ----------------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~----------~d~~g~t~Lh~A~~~~~~  136 (375)
                                      ....+..|.++++.|+..|+...++.++.... .+.          .+..|.||||.|+++|+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~  161 (285)
T d1wdya_          82 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV  161 (285)
T ss_dssp             HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred             cCCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCH
Confidence                            12345567788888888888888877776654 222          345689999999999999


Q ss_pred             HHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666          137 AVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH  206 (375)
Q Consensus       137 ~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~  206 (375)
                      +++++|+++.+.+++.+|..|.++++.+...+.....   .++.+.|  ++++++.+|.+|.||++.+.+..
T Consensus       162 ~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~  230 (285)
T d1wdya_         162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV---EAITHLLLDHGADVNVRGERGKTPLILAVEKK  230 (285)
T ss_dssp             HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTH---HHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTT
T ss_pred             HHHHHHHhccCCCcccccCCCCcccccccccccchHH---HHHHHHHHHCCCCCCccCCCCCCccchhhhcC
Confidence            9999999988999999999999999988776533110   1455555  67889999999999999988754

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1e-24  Score=187.19  Aligned_cols=160  Identities=18%  Similarity=0.169  Sum_probs=140.1

Q ss_pred             HhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHcc-------
Q 037666            7 YDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG-------   79 (375)
Q Consensus         7 L~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-------   79 (375)
                      +.+.|+++|.+ |.+|+||||+|+..|+.+++++|+++  +++.+..+..|.++++.|...++.++++.+...       
T Consensus        26 ~~~~g~~in~~-d~~g~TpL~~A~~~~~~~iv~~Ll~~--ga~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  102 (228)
T d1k1aa_          26 FQQGGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTA--GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD  102 (228)
T ss_dssp             HHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCC
T ss_pred             HHHCCCCCCcc-CCCCCccceehhcccccccccccccc--cccccccccccccccccccccccccchhhhhhcccccccc
Confidence            44689999997 99999999999999999999999998  788888888899999999888887777766543       


Q ss_pred             ------------------------------CCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHH
Q 037666           80 ------------------------------NKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLV  128 (375)
Q Consensus        80 ------------------------------~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh  128 (375)
                                                    ..+.....+..|.+|||.|+..+..++++.+++.+. .+.+|.+|+||||
T Consensus       103 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~  182 (228)
T d1k1aa_         103 LEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH  182 (228)
T ss_dssp             TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred             ccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccccccccccCcchHH
Confidence                                          222223455678999999999999999999999988 7788999999999


Q ss_pred             HHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCC
Q 037666          129 KLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLT  170 (375)
Q Consensus       129 ~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~  170 (375)
                      +|+.+|+.+++++|+++ |.++|.+|.+|+||||+|+++++.
T Consensus       183 ~A~~~g~~~~v~~Ll~~-Gad~n~~d~~G~TpL~~A~~~~~~  223 (228)
T d1k1aa_         183 SASGRGLLPLVRTLVRS-GADSSLKNCHNDTPLMVARSRRVI  223 (228)
T ss_dssp             HHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCTTTTCSSHHHH
T ss_pred             HHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHhCCCc
Confidence            99999999999999988 999999999999999999988754

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.1e-25  Score=173.72  Aligned_cols=119  Identities=18%  Similarity=0.066  Sum_probs=110.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCC-hHHHHHHH
Q 037666           22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGT-LPIVRAAA  100 (375)
Q Consensus        22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~-tpLh~Aa~  100 (375)
                      +.++||+|+..|+.++|++|+++  +.+++.+|.+|.||||+|+ .|+.+++++|++.++++ +.+|..|. ||||+|++
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~--gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~L~~A~~   78 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEA--GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAAR   78 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTT--TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHHH
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHc--CCccccccccccccccccc-ccccccccccccccccc-ccccccccccccccccc
Confidence            57899999999999999999998  8999999999999999775 79999999999999996 77777765 69999999


Q ss_pred             cCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHh
Q 037666          101 LGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLK  144 (375)
Q Consensus       101 ~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~  144 (375)
                      +|+.+++++|++.+. ++.+|.+|+||||+|+++|+.+++++|+.
T Consensus        79 ~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          79 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             cccccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999998 88999999999999999999999998875

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.91  E-value=1.2e-26  Score=215.18  Aligned_cols=135  Identities=16%  Similarity=0.102  Sum_probs=112.5

Q ss_pred             cccccCCCCCcHHHHHHHcCCHHHHHH---HHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccC--
Q 037666           14 IGQEITNLGNTALHVAAQANCIDFVKE---LLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPG--   88 (375)
Q Consensus        14 ~~~~~d~~g~tpLh~A~~~g~~~~v~~---Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d--   88 (375)
                      ++.+ |..|+||||+||++||.+++++   |++.  +++++.+|.+|+||||+||+.||.++|++|++.+++. +..+  
T Consensus        83 ~~~~-~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~--~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~-~~~~~~  158 (346)
T d2ajaa1          83 AHKK-GIKSEVICFVAAITGCSSALDTLCLLLTS--DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTE-IMAMIQ  158 (346)
T ss_dssp             HHHH-TCCHHHHHHHHHHHCCHHHHHHHTTC--C--CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTT-HHHHHS
T ss_pred             HHhc-cCCCCcHHHHHHHhCCHHHHHHHHHHHhC--CCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc-cccccc
Confidence            3444 7789999999999999887776   6777  8999999999999999999999999999999999986 5544  


Q ss_pred             CCCChHHHHHHHcCcHHHHHHHHHhcc-C---CcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccc
Q 037666           89 GDGTLPIVRAAALGQRQTVVLLYEKTK-G---SLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKR  153 (375)
Q Consensus        89 ~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~---~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~  153 (375)
                      .+|.||||+|+.+|+.+++++|++.++ .   +..+.+|.||+|.|+++|+.+++++|++. |.+++..
T Consensus       159 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~-ga~~~~~  226 (346)
T d2ajaa1         159 AENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC-PVMLAYA  226 (346)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS-HHHHHHH
T ss_pred             cCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhC-CCCcchH
Confidence            469999999999999999999999987 2   33556788999999999999999999987 5555443

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.91  E-value=2.9e-26  Score=212.72  Aligned_cols=170  Identities=13%  Similarity=0.066  Sum_probs=133.8

Q ss_pred             HHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchh--cCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666            5 DIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKN--KIGCTAFFYAAGSGMVEIVEEAMKGNKD   82 (375)
Q Consensus         5 ~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d--~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~   82 (375)
                      ++|.+.|+++|.. |.+|.||||+||+.||.++|++|+++  +++++..|  .+|+||||+|++.|+.++|++|++.+++
T Consensus       110 ~~L~~~~~~in~~-~~~g~taL~~Aa~~G~~~~v~~Ll~~--g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~  186 (346)
T d2ajaa1         110 CLLLTSDEIVKVI-QAENYQAFRLAAENGHLHVLNRLCEL--APTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPT  186 (346)
T ss_dssp             TTC--CCSSCC---CHHHHHHHHHHHHTTCHHHHHHHHHS--CTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGG
T ss_pred             HHHHhCCCccccc-CCCCCCHHHHHHHCCCHHHHHHHHHc--CCCccccccccCCCChhHHHHHHhhHHHHHHHHHcCCc
Confidence            3478899999997 99999999999999999999999999  77777765  4699999999999999999999999876


Q ss_pred             Cc--cccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CC------------------------------------------
Q 037666           83 IA--MVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GS------------------------------------------  117 (375)
Q Consensus        83 ~~--~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~------------------------------------------  117 (375)
                      ..  +..+.+|.||+|.|+++|+.+++++|++.++ .+                                          
T Consensus       187 ~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~  266 (346)
T d2ajaa1         187 EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFD  266 (346)
T ss_dssp             GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCC
T ss_pred             ccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHh
Confidence            42  3345667889999999999999999987653 10                                          


Q ss_pred             cccc-------hhhHHHHHHHhcCcHHHHHHHHhcCCc----ccccccCCCCcHHHHHHHhcCCCCCCCccchhhccc
Q 037666          118 LTDD-------ECIELLVKLIETDLYAVALRLLKDRPQ----LATKRDRNEETALHVLARKNLTSSNQNPCGVENVVP  184 (375)
Q Consensus       118 ~~d~-------~g~t~Lh~A~~~~~~~~v~~LL~~~~~----~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~  184 (375)
                      ..+.       .+.++++.|...++.+++++|++....    ..+..+.+|+||||+|++.|+.       +++++|.
T Consensus       267 ~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~-------e~v~lLL  337 (346)
T d2ajaa1         267 LVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQ-------GACALLL  337 (346)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCT-------THHHHHT
T ss_pred             HHhcccccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcH-------HHHHHHh
Confidence            0000       134678888888999999999976221    2334567899999999999988       8888773

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.7e-24  Score=175.74  Aligned_cols=139  Identities=17%  Similarity=0.175  Sum_probs=130.5

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++++.|.++|+++|.+ |.+|.||||+|+ .|+.|++++|+++  +++++..+..|.+|++.++..++.+.++.|++.+.
T Consensus        15 ~~v~~Ll~~g~d~n~~-d~~g~TpL~~A~-~~~~ei~~~Ll~~--~a~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~   90 (156)
T d1ihba_          15 EQLTSLLQNNVNVNAQ-NGFGRTALQVMK-LGNPEIARRLLLR--GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQA   90 (156)
T ss_dssp             HHHHHHTTSCCCTTCC-CTTSCCHHHHCC-SSCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHCCCCcCcc-CCcccccccccc-ccccccccccccc--ccccccccccCcccccccccccccccccccccccc
Confidence            5678888899999997 999999999886 7899999999999  89999999999999999999999999999999998


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc--CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK--GSLTDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~--~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      +. +..|..|.+|+|+|+..++.+++++|+++++  .+.+|.+|+||||+|+++++.+++++|+++
T Consensus        91 ~~-~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~  155 (156)
T d1ihba_          91 DV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN  155 (156)
T ss_dssp             CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             cc-cccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            86 8889999999999999999999999999997  667899999999999999999999999876

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.3e-25  Score=175.25  Aligned_cols=104  Identities=21%  Similarity=0.205  Sum_probs=57.7

Q ss_pred             hHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHH
Q 037666           59 TAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYA  137 (375)
Q Consensus        59 tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~  137 (375)
                      |||++|++.|+.++++.|++.|+++ +.+|.+|+||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+.+|+.+
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g~d~-n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~   82 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS   82 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTTCCC-CCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCH
T ss_pred             hHHHHHHHCCCHHHHHHHHHhhhcc-ccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchh
Confidence            4555555555555555555555443 4445555555555555555555555555544 4445555555555555555555


Q ss_pred             HHHHHHhcCCcccccccCCCCcHHHHH
Q 037666          138 VALRLLKDRPQLATKRDRNEETALHVL  164 (375)
Q Consensus       138 ~v~~LL~~~~~~~~~~d~~G~T~Lh~A  164 (375)
                      ++++|+++ |.+++.+|++|+||||+|
T Consensus        83 ~v~~Ll~~-Gad~~~~d~~G~t~l~~a  108 (118)
T d1myoa_          83 CVKLLLSK-GADKTVKGPDGLTALEAT  108 (118)
T ss_dssp             HHHHHHTT-CCCSSSSSSSTCCCCCTC
T ss_pred             hhhhhhcc-cccceeeCCCCCCHHHHH
Confidence            55555555 666777777777777766

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=2.3e-24  Score=168.13  Aligned_cols=107  Identities=23%  Similarity=0.284  Sum_probs=102.3

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcC
Q 037666           23 NTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALG  102 (375)
Q Consensus        23 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g  102 (375)
                      +|||++|++.|+.++|++|+++  +.+++.+|.+|+||||+|+..|+.+++++|++.++++ +.+|.+|+||||+|+.+|
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~--g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~di-n~~d~~g~tpLh~A~~~~   79 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAK--GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYEG   79 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTT--TCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTT-TCCSSSCSCHHHHHHTTT
T ss_pred             ChHHHHHHHCCCHHHHHHHHHh--hhcccccccccccccccccccccccccccccccccee-eecccccccchhhhhhcC
Confidence            5899999999999999999998  8999999999999999999999999999999999997 889999999999999999


Q ss_pred             cHHHHHHHHHhcc-CCcccchhhHHHHHHHh
Q 037666          103 QRQTVVLLYEKTK-GSLTDDECIELLVKLIE  132 (375)
Q Consensus       103 ~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~  132 (375)
                      +.+++++|+++|+ ++.+|.+|+||||+|..
T Consensus        80 ~~~~v~~Ll~~Gad~~~~d~~G~t~l~~a~~  110 (118)
T d1myoa_          80 HVSCVKLLLSKGADKTVKGPDGLTALEATDN  110 (118)
T ss_dssp             CCHHHHHHHTTCCCSSSSSSSTCCCCCTCSS
T ss_pred             chhhhhhhhcccccceeeCCCCCCHHHHHhH
Confidence            9999999999998 88999999999999843

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.5e-23  Score=166.32  Aligned_cols=119  Identities=20%  Similarity=0.156  Sum_probs=107.0

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCc
Q 037666           24 TALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQ  103 (375)
Q Consensus        24 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~  103 (375)
                      ++||.||..|+.++|+.|+++  +.+++.+|.+|+||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+.+|+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~--g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~-~~~d~~g~tpLh~A~~~g~   79 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYE--VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNN   79 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTST--TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTC
T ss_pred             HHHHHHHHcCCHHHHHHHHHc--CCCcccccccccccccccccccccccccccccccccc-ccccccCcccccccchhhH
Confidence            689999999999999999999  8999999999999999999999999999999999986 8899999999999999999


Q ss_pred             HHHHHHHHHhcc-CCccc-chhhHHHHHH--HhcCcHHHHHHHHhc
Q 037666          104 RQTVVLLYEKTK-GSLTD-DECIELLVKL--IETDLYAVALRLLKD  145 (375)
Q Consensus       104 ~~iv~~Ll~~~~-~~~~d-~~g~t~Lh~A--~~~~~~~~v~~LL~~  145 (375)
                      .+++++|+++++ ++..+ .+|+|+++.+  .++|+.+++++|+..
T Consensus        80 ~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          80 VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence            999999999998 66544 4577776655  577889999998864

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=1.5e-22  Score=164.75  Aligned_cols=136  Identities=21%  Similarity=0.157  Sum_probs=125.0

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      +++++|+++|++++ . |..|+||||+|+..++.++++.++..  +......+..+.++++.++...+.+.++.+.+.+.
T Consensus        16 ~~v~~LL~~ga~~~-~-~~~g~t~L~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   91 (153)
T d1awcb_          16 DEVRILMANGAPFT-T-DWLGTSPLHLAAQYGHFSTTEVLLRA--GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGA   91 (153)
T ss_dssp             HHHHHHHHHTCCCC-C-CTTCCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred             HHHHHHHHcCCCcc-c-ccCCCccccccccccccccccccccc--cccccccccccccccccccccccceeeecccccCC
Confidence            56778888999877 3 89999999999999999999999988  56666778889999999999999999999999999


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRL  142 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~L  142 (375)
                      +. ..+|.+|.||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+.+|+.++++.|
T Consensus        92 ~~-~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          92 DV-NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             cc-ccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            86 7899999999999999999999999999999 888999999999999999999999754

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.9e-23  Score=164.61  Aligned_cols=118  Identities=15%  Similarity=0.143  Sum_probs=108.7

Q ss_pred             CChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhh-HHHHHHHhcC
Q 037666           57 GCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECI-ELLVKLIETD  134 (375)
Q Consensus        57 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~-t~Lh~A~~~~  134 (375)
                      +.++||+|++.|+.+++++|++.|+++ +.+|.+|.||+|.|+ .|+.+++++|+++++ ++.+|..+. ||||+|+++|
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~-n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g   80 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREG   80 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCcc-ccccccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence            569999999999999999999999996 889999999999775 799999999999998 888877765 6999999999


Q ss_pred             cHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccc
Q 037666          135 LYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVP  184 (375)
Q Consensus       135 ~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~  184 (375)
                      +.++++.|+++ |.+++.+|.+|+||||+|+++|+.       ++.++|.
T Consensus        81 ~~~~v~~Ll~~-ga~~~~~d~~G~T~l~~A~~~g~~-------~~v~~Ll  122 (125)
T d1bi7b_          81 FLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHR-------DVARYLR  122 (125)
T ss_dssp             CHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCH-------HHHHHHS
T ss_pred             ccccccccccc-ccccccccCCCCCHHHHHHHcCCH-------HHHHHHH
Confidence            99999999998 999999999999999999999988       8888764

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.88  E-value=3.3e-22  Score=170.99  Aligned_cols=171  Identities=19%  Similarity=0.221  Sum_probs=154.6

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK   81 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~   81 (375)
                      ++.++|.+.|.+++.+ +..+.++++.++..++.+......... .......+..|.++.+.+.........+.|.+.+.
T Consensus        37 e~v~~Ll~~g~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~  114 (209)
T d1ot8a_          37 DAAKRLLDAGADANSQ-DNTGRTPLHAAVAADAMGVFQILLRNR-ATNLNARMHDGTTPLILAARLAIEGMVEDLITADA  114 (209)
T ss_dssp             HHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHTCT-TCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTC
T ss_pred             HHHHHHHhhccccccc-ccccccccccccccccccccccccccc-ccccccccccccccccccccccchhhhhhhhhhcc
Confidence            5788899999999987 999999999999999988877777663 34455566779999999999999999999999998


Q ss_pred             CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666           82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA  160 (375)
Q Consensus        82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~  160 (375)
                      ++ +.+|..|+||||.++.+|..++++.+++.+. .+..|.+|.||||.|+.+|+.++++.|++. |.+++.+|.+|+||
T Consensus       115 ~~-~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-gad~n~~d~~g~Tp  192 (209)
T d1ot8a_         115 DI-NAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDN-FANREITDHMDRLP  192 (209)
T ss_dssp             CT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred             cc-cccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccchhccccHHHHHHHHHHC-CCCCCCcCCCCCCH
Confidence            86 7889999999999999999999999999998 888999999999999999999999999988 89999999999999


Q ss_pred             HHHHHHhcCCCCCCCccchhhcc
Q 037666          161 LHVLARKNLTSSNQNPCGVENVV  183 (375)
Q Consensus       161 Lh~A~~~~~~~~~~~~~~v~~~L  183 (375)
                      ||+|+++|+.       +++++|
T Consensus       193 l~~A~~~~~~-------~iv~lL  208 (209)
T d1ot8a_         193 RDVASERLHH-------DIVRLL  208 (209)
T ss_dssp             HHHHHHTTCH-------HHHHHH
T ss_pred             HHHHHHcCCH-------HHHhhc
Confidence            9999999988       888765

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.2e-22  Score=156.85  Aligned_cols=118  Identities=14%  Similarity=0.117  Sum_probs=107.0

Q ss_pred             hHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHH
Q 037666           59 TAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYA  137 (375)
Q Consensus        59 tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~  137 (375)
                      ++||.|+..|+.++++.|++.++++ +.+|++|+||||+|+..|+.+++++|++.+. .+.+|.+|+||||+|+.+|+.+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~-n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~   81 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQ   81 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCc-cccccccccccccccccccccccccccccccccccccccCcccccccchhhHHH
Confidence            6899999999999999999999996 8999999999999999999999999999998 8889999999999999999999


Q ss_pred             HHHHHHhcCCccccccc-CCCCcHHHHHH--HhcCCCCCCCccchhhccch
Q 037666          138 VALRLLKDRPQLATKRD-RNEETALHVLA--RKNLTSSNQNPCGVENVVPK  185 (375)
Q Consensus       138 ~v~~LL~~~~~~~~~~d-~~G~T~Lh~A~--~~~~~~~~~~~~~v~~~L~~  185 (375)
                      +++.|+++ |.+++.+| .+|+||++++.  ++|+.       +++++|.+
T Consensus        82 ~v~~Ll~~-ga~v~~~~~~~~~~~~~~~~a~~~g~~-------eiv~~L~~  124 (130)
T d1ycsb1          82 VCKFLVES-GAAVFAMTYSDMQTAADKCEEMEEGYT-------QCSQFLYG  124 (130)
T ss_dssp             HHHHHHHT-TCCTTCCCSSSCCCHHHHCCSSSTTCC-------CHHHHHHH
T ss_pred             HHHHHHHc-CCCcccccCCCCCCHHHHHHHHHcChH-------HHHHHHHh
Confidence            99999998 99999876 46899988764  45666       88888754

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=2.5e-21  Score=157.62  Aligned_cols=118  Identities=15%  Similarity=0.075  Sum_probs=102.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCChhhHhch------hcCCChHHHHHHHc---CcHHHHHHHHccCCCCccccCCCCChHH
Q 037666           25 ALHVAAQANCIDFVKELLKMMSTEDLAKK------NKIGCTAFFYAAGS---GMVEIVEEAMKGNKDIAMVPGGDGTLPI   95 (375)
Q Consensus        25 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~------d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~g~tpL   95 (375)
                      .|+.|++.++.+.+..++..  +.+++.+      +..|+||||+|++.   |+.+++++|++.|+++ +.+|.+|+|||
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadi-n~~d~~g~TpL   85 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYAD--GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTAL   85 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHT--TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHH
T ss_pred             HHHHHHHhCCHHHHHHHHHc--CCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCCh-hhhhhhhcccc
Confidence            45577889999888888887  5555543      67799999999974   6789999999999986 88999999999


Q ss_pred             HHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666           96 VRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD  145 (375)
Q Consensus        96 h~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~  145 (375)
                      |+|+..|+.+++++|+++++ ++.+|.+|+||||+|+++|+.++++.|++.
T Consensus        86 h~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~  136 (154)
T d1dcqa1          86 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA  136 (154)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             ccccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence            99999999999999999988 888999999999999999999999988876

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=6.1e-21  Score=155.33  Aligned_cols=105  Identities=21%  Similarity=0.285  Sum_probs=94.3

Q ss_pred             hhCccccccc-----cCCCCCcHHHHHHHc---CCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHcc
Q 037666            8 DKYEDEIGQE-----ITNLGNTALHVAAQA---NCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG   79 (375)
Q Consensus         8 ~~~~~~~~~~-----~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~   79 (375)
                      ...|.+++..     .+..|+||||+|++.   |+.+++++|+++  |.+++.+|.+|+||||+|++.|+.+++++|++.
T Consensus        26 ~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~--gadin~~d~~g~TpLh~A~~~~~~~~v~~Ll~~  103 (154)
T d1dcqa1          26 YADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN--SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG  103 (154)
T ss_dssp             HHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH--CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             HHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHc--CCChhhhhhhhcccccccccccccccccccccc
Confidence            3456665533     266799999999975   678999999999  899999999999999999999999999999999


Q ss_pred             CCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc
Q 037666           80 NKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK  115 (375)
Q Consensus        80 ~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~  115 (375)
                      |+++ +.+|.+|+||||+|+++|+.+++++|++.+.
T Consensus       104 gad~-~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~  138 (154)
T d1dcqa1         104 KASI-EIANESGETPLDIAKRLKHEHCEELLTQALS  138 (154)
T ss_dssp             TCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             Cccc-cccCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence            9997 8999999999999999999999999999776

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=2.5e-21  Score=175.61  Aligned_cols=161  Identities=11%  Similarity=-0.057  Sum_probs=110.4

Q ss_pred             HHHHHHhhCccccccccCCCCCcHHHHHHHcCCH---HHHHHHHHcCChhhHhchhcCCChHHHHHHHcCc----HH---
Q 037666            2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCI---DFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGM----VE---   71 (375)
Q Consensus         2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~---~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~----~~---   71 (375)
                      +++++|+++|++++.+ |..|+||||.||..++.   +.++.+++.. ...++.+|..|+||||+++..+.    ..   
T Consensus       121 ~~v~~Ll~~gad~~~~-d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l-~~~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~  198 (301)
T d1sw6a_         121 ELVKHLVKHGSNRLYG-DNMGESCLVKAVKSVNNYDSGTFEALLDYL-YPCLILEDSMNRTILHHIIITSGMTGCSAAAK  198 (301)
T ss_dssp             HHHHHHHHTTCCTTBC-CTTCCCHHHHHHHSSHHHHTTCHHHHHHHH-GGGGGEECTTCCCHHHHHHHHHTSTTCHHHHH
T ss_pred             HHHHHHHHCCCCCCcC-CcccccHHHHhhhcccchhhhhHHHHHHHH-hhhhhhcccccCCHHHHHHHHhCccccHHHHH
Confidence            5788999999999987 99999999999987752   2334444443 44577889999999999886543    22   


Q ss_pred             -----HHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHh---cc-CCcccchhhHHHHHHHhcCcHHHHHHH
Q 037666           72 -----IVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEK---TK-GSLTDDECIELLVKLIETDLYAVALRL  142 (375)
Q Consensus        72 -----iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~---~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~L  142 (375)
                           +++.+.+.+.......+..+.++++.+........+..+...   .. ++.+|.+|+||||+|+++|+.+++++|
T Consensus       199 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~L  278 (301)
T d1sw6a_         199 YYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDAL  278 (301)
T ss_dssp             HHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence                 344555555544455666777888877666655544433211   11 677899999999999999999999999


Q ss_pred             HhcCCcccccccCCCCcHHHHHH
Q 037666          143 LKDRPQLATKRDRNEETALHVLA  165 (375)
Q Consensus       143 L~~~~~~~~~~d~~G~T~Lh~A~  165 (375)
                      ++. |++++.+|++|.||||+|+
T Consensus       279 l~~-GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         279 LDY-GADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             HHT-TCCTTCCCTTSCCGGGGTC
T ss_pred             HHC-CCCCCCCCCCCCCHHHHcC
Confidence            998 9999999999999999985