Citrus Sinensis ID: 037670

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
SADGKPAPVLPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccccccccEEcccccccccHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccEEEccccccccccHEccccccccHHHHHHHHHHHHHHccccccccccccEcEEEEEEEEEccEEEEEEEEEEccccEEEEEEEccccccccccccc
Coil and Loop (DISEMBL)
sadgkpapvlPAAAREFLEAHNLARAAVGvaplkwseklgngtNRVVRFQRnkmgcqfanltsgkyganqlwgsgmavtprmAVDAWVNEKtfynhadnscapnhrcgvyKQVVWRKSLELGCAQATCVKQQVTLTvcfydppgniigespy
Flexible Loop (DISEMBL)
sadgkpapvLPAAAREFLEAHNLARAAVGvaplkwseklgngTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYnhadnscapnhRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDppgniigespy
Low Complexity Region (SEG)
SADGKPAPVLPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY
Disordered region (IsUnstruct)
*************AREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNI******
Disordered Region (DISOPRED)
******A****AAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIG*SPY
Disordered Region (DISEMBL)
SADGKPAPVLPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY
Disordered Region (DISPRO)
************AAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGES**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
SADGKPAPVLPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
Q41495	214	STS14 protein OS=Solanum	N/A	no	0.921	0.654	0.642	2e-52
Q40374	173	Pathogenesis-related prot	N/A	no	0.881	0.774	0.452	1e-28
P09042	168	Pathogenesis-related prot	N/A	no	0.881	0.797	0.434	4e-27
P07053	168	Pathogenesis-related prot	N/A	no	0.861	0.779	0.420	7e-26
P08299	168	Pathogenesis-related prot	N/A	no	0.881	0.797	0.420	8e-25
Q41359	167	Pathogenesis-related prot	N/A	no	0.888	0.808	0.405	1e-23
P33154	161	Pathogenesis-related prot	no	no	0.914	0.863	0.426	4e-23
Q00008	167	Pathogenesis-related prot	N/A	no	0.888	0.808	0.410	6e-23
P35792	164	Pathogenesis-related prot	N/A	no	0.888	0.823	0.402	7e-23
Q05968	164	Pathogenesis-related prot	N/A	no	0.888	0.823	0.395	4e-22

>sp|Q41495|ST14_SOLTU STS14 protein OS=Solanum tuberosum GN=STS14 PE=2 SV=1

 Score =  204 bits (519), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 90/140 (64%), Positives = 110/140 (78%)

Query: 13  AAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLW 72
           AA+EFL+AHN AR+ VGV PL WS  L   T+ +VR+QR+K  C FANL++GKYG NQLW
Sbjct: 75  AAQEFLDAHNKARSEVGVGPLTWSPMLAKETSLLVRYQRDKQNCSFANLSNGKYGGNQLW 134

Query: 73  GSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQ 132
            SG  VTPRMAVD+WV EK FYN+ +NSC  + +CGVY Q+VW+KS+ELGCAQ TC +  
Sbjct: 135 ASGTVVTPRMAVDSWVAEKKFYNYENNSCTGDDKCGVYTQIVWKKSIELGCAQRTCYEGP 194

Query: 133 VTLTVCFYDPPGNIIGESPY 152
            TLTVCFY+PPGN+IGE PY
Sbjct: 195 ATLTVCFYNPPGNVIGEKPY 214

May protect the outer tissues of the pistil from pathogen attack.
Solanum tuberosum (taxid: 4113)

>sp|Q40374|PR1_MEDTR Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1

 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 77/137 (56%), Gaps = 3/137 (2%)

Query: 16  EFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSG 75
           +FL   N+ARAAVG+ PL W +KL +        +RN    + +N   G YG N  WGSG
Sbjct: 40  QFLIPQNIARAAVGLRPLVWDDKLTHYAQWYANQRRNDCALEHSN---GPYGENIFWGSG 96

Query: 76  MAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTL 135
           +   P  AV AWV+EK FYN+  NSC     CG Y QVVW  + ++GCA   C   + T 
Sbjct: 97  VGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHYTQVVWGSTTKVGCASVVCSDDKGTF 156

Query: 136 TVCFYDPPGNIIGESPY 152
             C YDPPGN  GE PY
Sbjct: 157 MTCNYDPPGNYYGERPY 173

Probably involved in the defense reaction of plants against pathogens.

Medicago truncatula (taxid: 3880)

>sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3

 Score =  120 bits (300), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/138 (43%), Positives = 82/138 (59%), Gaps = 4/138 (2%)

Query: 15  REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
           +++L+AHN ARA VGV PL W +++           +    C   + + G+YG N  WGS
Sbjct: 35  QDYLDAHNTARADVGVEPLTWDDQVAAYAQNYAS--QLAADCNLVH-SHGQYGENLAWGS 91

Query: 75  GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT 134
           G  +T   AV+ WVNEK +Y H  N+CA    CG Y QVVWR S+ +GCA+  C      
Sbjct: 92  GDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGYI 151

Query: 135 LTVCFYDPPGNIIGESPY 152
           ++ C YDPPGN+IG+SPY
Sbjct: 152 VS-CNYDPPGNVIGKSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1

 Score =  115 bits (289), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 85/145 (58%), Gaps = 14/145 (9%)

Query: 13  AAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMG-----CQFANLTSGKYG 67
           + +++L+AHN ARA VGV PL W        N V  + +N +      C   + + G+YG
Sbjct: 33  SQQDYLDAHNTARADVGVEPLTWD-------NGVAAYAQNYVSQLAADCNLVH-SHGQYG 84

Query: 68  ANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQAT 127
            N   GSG  +T   AV+ WV+EK +Y+H  N+CA    CG Y QVVWR S+ +GCA+  
Sbjct: 85  ENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVK 144

Query: 128 CVKQQVTLTVCFYDPPGNIIGESPY 152
           C      ++ C YDPPGN+IG+SPY
Sbjct: 145 CNNGGYVVS-CNYDPPGNVIGQSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1

 Score =  112 bits (280), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 58/138 (42%), Positives = 80/138 (57%), Gaps = 4/138 (2%)

Query: 15  REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
           +++L+AHN ARA VGV PL W +++           +    C   + + G+YG N   GS
Sbjct: 35  QDYLDAHNTARADVGVEPLTWDDQVAAYAQNYAS--QLAADCNLVH-SHGQYGENLAEGS 91

Query: 75  GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT 134
           G  +T   AV+ WV+EK +Y+H  N+CA    CG Y QVVWR S+ +GCA+  C      
Sbjct: 92  GDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGYV 151

Query: 135 LTVCFYDPPGNIIGESPY 152
           ++ C YDPPGN  GESPY
Sbjct: 152 VS-CNYDPPGNYRGESPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|Q41359|PR1_SAMNI Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 3/138 (2%)

Query: 15  REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
           +++++AHN AR+AV V P+ W E +     +    Q     C+  +    +YG N  +GS
Sbjct: 33  QDYVDAHNAARSAVNVGPVTWDESVAAFARQYA--QSRAGDCRLVHSGDPRYGENLAFGS 90

Query: 75  GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT 134
           G  +T R AVD WV E+  YN   N+CAP   CG Y QVVWR S+ +GCA+  C      
Sbjct: 91  GFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNSVRIGCARVRCNNGAWF 150

Query: 135 LTVCFYDPPGNIIGESPY 152
           +T C Y PPGN  G+ PY
Sbjct: 151 IT-CNYSPPGNYAGQRPY 167

Probably involved in the defense reaction of plants against pathogens.

Sambucus nigra (taxid: 4202)

>sp|P33154|PR1_ARATH Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1

 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 85/150 (56%), Gaps = 11/150 (7%)

Query: 7   APVLPAAARE----FLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLT 62
           A VLP+ A++    +L  HN AR AVGV P++W E++           R    C+  + +
Sbjct: 19  ALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN--CRLIH-S 75

Query: 63  SGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELG 122
            G YG N  WGSG  ++   AV+ WV+EK  YN+A N+C  N  CG Y QVVWRKS+ LG
Sbjct: 76  GGPYGENLAWGSG-DLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRKSVRLG 132

Query: 123 CAQATCVKQQVTLTVCFYDPPGNIIGESPY 152
           CA+  C     T+  C YDP GN + E PY
Sbjct: 133 CAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

Partially responsible for acquired pathogen resistance.

Arabidopsis thaliana (taxid: 3702)

>sp|Q00008|PRMS_MAIZE Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1

 Score =  106 bits (264), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 75/139 (53%), Gaps = 4/139 (2%)

Query: 15  REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
           +++L   N ARAAVGV P+ WS KL     +   +   + G      + G YG N  WGS
Sbjct: 32  QDYLTPQNSARAAVGVGPVTWSTKLQQFAEK---YAAQRAGDCRLQHSGGPYGENIFWGS 88

Query: 75  -GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQV 133
            G       AV +WV+EK +YN+A NSCA    CG Y QVVWR +  +GCA+  C   + 
Sbjct: 89  AGFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHYTQVVWRATTSIGCARVVCRDNRG 148

Query: 134 TLTVCFYDPPGNIIGESPY 152
              +C Y+P GNI G  PY
Sbjct: 149 VFIICNYEPRGNIAGMKPY 167

Probably involved in the defense reaction of plants against pathogens.

Zea mays (taxid: 4577)

>sp|P35792|PR12_HORVU Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1

 Score =  105 bits (263), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 74/139 (53%), Gaps = 4/139 (2%)

Query: 15  REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
           ++++  HN AR+AVGV  + WS KL          + N    Q    + G YG N  WGS
Sbjct: 29  QDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQH---SGGPYGENIFWGS 85

Query: 75  -GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQV 133
            G       AV++WVNEK  YN+  N+CA    CG Y QVVWR S  +GCA+  C   + 
Sbjct: 86  AGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRG 145

Query: 134 TLTVCFYDPPGNIIGESPY 152
               C Y+P GNI+G+ PY
Sbjct: 146 VFITCNYEPRGNIVGQKPY 164

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|Q05968|PR1_HORVU Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1

 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 74/139 (53%), Gaps = 4/139 (2%)

Query: 15  REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
           ++++  HN AR+AVGV  + WS KL          + N    Q    + G YG N  WGS
Sbjct: 29  QDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQH---SGGPYGENIFWGS 85

Query: 75  -GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQV 133
            G       AV++WV+EK  Y++  N+CA    CG Y QVVWR S  +GCA+  C   + 
Sbjct: 86  AGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRG 145

Query: 134 TLTVCFYDPPGNIIGESPY 152
               C Y+P GNIIG+ PY
Sbjct: 146 VFITCNYEPRGNIIGQKPY 164

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
255562771	173	STS14 protein precursor, putative [Ricin	1.0	0.878	0.756	2e-65
224084185	182	predicted protein [Populus trichocarpa]	0.960	0.802	0.782	8e-65
224094644	183	predicted protein [Populus trichocarpa]	0.960	0.797	0.770	1e-63
356502210	172	PREDICTED: STS14 protein-like [Glycine m	0.993	0.877	0.730	4e-62
356559434	176	PREDICTED: STS14 protein-like [Glycine m	0.907	0.784	0.755	8e-59
358346402	172	Pathogenesis-related maize seed protein	0.940	0.831	0.678	8e-56
225468210	184	PREDICTED: STS14 protein [Vitis vinifera	0.934	0.771	0.654	3e-54
147843032	169	hypothetical protein VITISV_023017 [Viti	0.934	0.840	0.654	3e-54
356496820	178	PREDICTED: STS14 protein-like [Glycine m	1.0	0.853	0.631	1e-52
359495782	171	PREDICTED: STS14 protein-like [Vitis vin	0.934	0.830	0.631	1e-51

>gi|255562771|ref|XP_002522391.1| STS14 protein precursor, putative [Ricinus communis] gi|223538469|gb|EEF40075.1| STS14 protein precursor, putative [Ricinus communis]

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 115/152 (75%), Positives = 130/152 (85%)

Query: 1   SADGKPAPVLPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFAN 60
           +A   P P LP+AAR+FL AHN ARAAVGV+PLKWSE L N T+R+VR+QRNKMGCQFAN
Sbjct: 22  AAAQAPTPPLPSAARDFLSAHNQARAAVGVSPLKWSEMLANATSRLVRYQRNKMGCQFAN 81

Query: 61  LTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLE 120
           LT+ KYG NQLW SGMAVTP MAVD WV EK +YN  DNSC PNH+CGVY QVVW+KSLE
Sbjct: 82  LTNSKYGGNQLWASGMAVTPLMAVDNWVQEKAYYNRTDNSCEPNHQCGVYTQVVWKKSLE 141

Query: 121 LGCAQATCVKQQVTLTVCFYDPPGNIIGESPY 152
           LGCAQA+CVK+Q +LTVCFY+PPGNIIGESPY
Sbjct: 142 LGCAQASCVKEQASLTVCFYNPPGNIIGESPY 173

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084185|ref|XP_002307231.1| predicted protein [Populus trichocarpa] gi|222856680|gb|EEE94227.1| predicted protein [Populus trichocarpa]

 Score =  251 bits (641), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 115/147 (78%), Positives = 129/147 (87%), Gaps = 1/147 (0%)

Query: 7   APV-LPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGK 65
           APV LP  A+EFL++HN ARAAVGV PLKWSE L N T+R+VR+QRNKMGCQFANL++ K
Sbjct: 36  APVPLPNVAKEFLQSHNQARAAVGVGPLKWSEMLANATSRLVRYQRNKMGCQFANLSNSK 95

Query: 66  YGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQ 125
           YGANQLW SGMAVTP MAVD WV EK +YNH +NSCAP+HRCGVY QVVWRKSLELGCAQ
Sbjct: 96  YGANQLWASGMAVTPLMAVDHWVQEKNYYNHTNNSCAPSHRCGVYTQVVWRKSLELGCAQ 155

Query: 126 ATCVKQQVTLTVCFYDPPGNIIGESPY 152
           ATCVK Q +LT+CFY+PPGNIIGESPY
Sbjct: 156 ATCVKDQASLTICFYNPPGNIIGESPY 182

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094644|ref|XP_002310192.1| predicted protein [Populus trichocarpa] gi|222853095|gb|EEE90642.1| predicted protein [Populus trichocarpa]

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/148 (77%), Positives = 125/148 (84%), Gaps = 2/148 (1%)

Query: 6   PAPVLPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGK 65
           P P LP  A EFL++HN ARAAVGV PLKWSE L N T+R+VR+QRNKMGCQFANL+  K
Sbjct: 37  PIP-LPNVANEFLQSHNQARAAVGVGPLKWSEMLANATSRIVRYQRNKMGCQFANLSDSK 95

Query: 66  YGANQLWGS-GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCA 124
           YG NQLW S GMAVTPRMAVD WV EK +YNH  NSCAPNH CGVY QVVWRKSLELGCA
Sbjct: 96  YGGNQLWSSTGMAVTPRMAVDNWVQEKNYYNHTGNSCAPNHSCGVYTQVVWRKSLELGCA 155

Query: 125 QATCVKQQVTLTVCFYDPPGNIIGESPY 152
           QATCVK+Q +LT+C+YDPPGNIIGESPY
Sbjct: 156 QATCVKEQASLTICYYDPPGNIIGESPY 183

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502210|ref|XP_003519913.1| PREDICTED: STS14 protein-like [Glycine max]

 Score =  242 bits (617), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 111/152 (73%), Positives = 130/152 (85%), Gaps = 1/152 (0%)

Query: 2   ADGKP-APVLPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFAN 60
           A+  P AP L A AREFLEAHN ARAAVGV PL+WSE+L N T+++ R+QR+K+GC+FAN
Sbjct: 21  AEAPPLAPELSAEAREFLEAHNQARAAVGVEPLRWSEQLANVTSKLARYQRDKLGCEFAN 80

Query: 61  LTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLE 120
           L++GKYGANQL   G AVTPRMAV+ WV +K FYNHADNSC PNHRCGVY QVVWRKSLE
Sbjct: 81  LSTGKYGANQLLAWGTAVTPRMAVEEWVKQKQFYNHADNSCVPNHRCGVYTQVVWRKSLE 140

Query: 121 LGCAQATCVKQQVTLTVCFYDPPGNIIGESPY 152
           LGCA+ATCVK+Q +LT+CFY+PPGN IGESPY
Sbjct: 141 LGCARATCVKEQASLTICFYNPPGNYIGESPY 172

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559434|ref|XP_003548004.1| PREDICTED: STS14 protein-like [Glycine max]

 Score =  231 bits (589), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 105/139 (75%), Positives = 121/139 (87%), Gaps = 1/139 (0%)

Query: 15  REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
           REFLEAHN ARAAVGV PL+WSE++ N T+++ R+QR K GCQFANLT+GKYGANQL   
Sbjct: 38  REFLEAHNQARAAVGVEPLRWSEQVANVTSKLARYQRVKTGCQFANLTAGKYGANQLLAR 97

Query: 75  G-MAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQV 133
           G  AVTPRMAV+ WV +K FYNHADNSCAPNHRCGVY QVVWRKS+ELGCAQATCVK+Q 
Sbjct: 98  GSAAVTPRMAVEEWVKQKQFYNHADNSCAPNHRCGVYTQVVWRKSVELGCAQATCVKEQA 157

Query: 134 TLTVCFYDPPGNIIGESPY 152
           +LT+CFY+PPGN +GESPY
Sbjct: 158 SLTICFYNPPGNYVGESPY 176

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346402|ref|XP_003637257.1| Pathogenesis-related maize seed protein [Medicago truncatula] gi|355503192|gb|AES84395.1| Pathogenesis-related maize seed protein [Medicago truncatula]

 Score =  221 bits (563), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 97/143 (67%), Positives = 116/143 (81%)

Query: 10  LPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGAN 69
           L A AREFL+ HN ARA+VGV PL WSE+L N T+++VR+QR+K+ CQFANLT+GKYGAN
Sbjct: 30  LSATAREFLQTHNQARASVGVEPLTWSEQLANTTSKLVRYQRDKLSCQFANLTAGKYGAN 89

Query: 70  QLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCV 129
           QL   G AVTPRM V+ WV EK F NH+DN+C  NHRCGVY QVVWRKS+ELGCAQ TC 
Sbjct: 90  QLMARGAAVTPRMVVEEWVKEKEFLNHSDNTCVVNHRCGVYTQVVWRKSVELGCAQTTCG 149

Query: 130 KQQVTLTVCFYDPPGNIIGESPY 152
           K+  +L++CFY PPGN +GESPY
Sbjct: 150 KEDTSLSICFYYPPGNYVGESPY 172

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225468210|ref|XP_002262744.1| PREDICTED: STS14 protein [Vitis vinifera] gi|298205058|emb|CBI38354.3| unnamed protein product [Vitis vinifera]

 Score =  216 bits (550), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 114/142 (80%)

Query: 11  PAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQ 70
           P +  EFLEAHN ARA VGV P +WSE+L + T+ +VR+QR+K GCQFANL++ KYG NQ
Sbjct: 43  PNSTEEFLEAHNQARAEVGVGPFQWSEQLAHATSLLVRYQRDKHGCQFANLSNSKYGGNQ 102

Query: 71  LWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVK 130
           LW SG  +T R+AV+ WV EK +YNH+DNSC  NH CGVY QVVWRKSLELGCA+A C K
Sbjct: 103 LWASGSGMTARLAVEEWVGEKKYYNHSDNSCVANHECGVYTQVVWRKSLELGCAKAVCAK 162

Query: 131 QQVTLTVCFYDPPGNIIGESPY 152
           +  +LT+CFY+PPGN+IGESPY
Sbjct: 163 EDASLTICFYNPPGNVIGESPY 184

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147843032|emb|CAN83306.1| hypothetical protein VITISV_023017 [Vitis vinifera]

 Score =  216 bits (550), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 114/142 (80%)

Query: 11  PAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQ 70
           P +  EFLEAHN ARA VGV P +WSE+L + T+ +VR+QR+K GCQFANL++ KYG NQ
Sbjct: 28  PNSTEEFLEAHNQARAEVGVGPFQWSEQLAHATSLLVRYQRDKHGCQFANLSNSKYGGNQ 87

Query: 71  LWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVK 130
           LW SG  +T R+AV+ WV EK +YNH+DNSC  NH CGVY QVVWRKSLELGCA+A C K
Sbjct: 88  LWASGSGMTARLAVEEWVGEKKYYNHSDNSCVANHECGVYTQVVWRKSLELGCAKAVCAK 147

Query: 131 QQVTLTVCFYDPPGNIIGESPY 152
           +  +LT+CFY+PPGN+IGESPY
Sbjct: 148 EDASLTICFYNPPGNVIGESPY 169

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496820|ref|XP_003517263.1| PREDICTED: STS14 protein-like [Glycine max]

 Score =  210 bits (535), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 96/152 (63%), Positives = 113/152 (74%)

Query: 1   SADGKPAPVLPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFAN 60
           +A   P P L AAAREFLEAHN ARA VGV  L WSEKLGN ++ +VR+QRNK GC+FAN
Sbjct: 27  TAPENPPPPLTAAAREFLEAHNQARAEVGVEALSWSEKLGNVSSLMVRYQRNKKGCEFAN 86

Query: 61  LTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLE 120
           LT+ +YG NQLW     V PR+ V+ WV EK FY   +N+C   H CGVY QVVWR S E
Sbjct: 87  LTASRYGGNQLWAGVTEVAPRVVVEEWVKEKKFYVRENNTCVGKHECGVYTQVVWRNSTE 146

Query: 121 LGCAQATCVKQQVTLTVCFYDPPGNIIGESPY 152
           +GCAQA CVK+Q +LT+CFYDPPGN+IGE PY
Sbjct: 147 VGCAQAVCVKEQASLTICFYDPPGNVIGEIPY 178

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495782|ref|XP_003635089.1| PREDICTED: STS14 protein-like [Vitis vinifera]

 Score =  207 bits (526), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 91/144 (63%), Positives = 114/144 (79%), Gaps = 2/144 (1%)

Query: 11  PAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQ 70
           P   +E+L+AHN ARA VGV PL+WSE+L + T+ +VR+QR+  GC+FANL  G+YGANQ
Sbjct: 28  PNPTQEYLDAHNQARAQVGVGPLQWSEQLAHETSLLVRYQRDNQGCEFANLKRGQYGANQ 87

Query: 71  L--WGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATC 128
           L  W SG  +T R+AV+ WV EK +YNH+DNSC  NH CGVY QVVWRKSLELGCA+A C
Sbjct: 88  LRLWASGSGMTARLAVEEWVGEKKYYNHSDNSCVANHECGVYTQVVWRKSLELGCAKAVC 147

Query: 129 VKQQVTLTVCFYDPPGNIIGESPY 152
            K+  +LT+CFY+PPGN+IGESPY
Sbjct: 148 AKEDASLTICFYNPPGNVIGESPY 171

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
TAIR|locus:2154835	185	AT5G66590 "AT5G66590" [Arabido	1.0	0.821	0.594	5.8e-50
TAIR|locus:2134178	163	AT4G33720 "AT4G33720" [Arabido	0.875	0.815	0.471	2.2e-27
TAIR|locus:504954862	207	AT5G57625 "AT5G57625" [Arabido	0.934	0.685	0.428	4.5e-27
TAIR|locus:2125244	185	AT4G31470 "AT4G31470" [Arabido	0.881	0.724	0.420	3.2e-26
TAIR|locus:2117547	210	AT4G25790 "AT4G25790" [Arabido	0.888	0.642	0.398	1.1e-25
TAIR|locus:2064294	161	PR1 "AT2G14610" [Arabidopsis t	0.914	0.863	0.426	1.8e-25
TAIR|locus:2035317	241	AT1G01310 "AT1G01310" [Arabido	0.888	0.560	0.418	4.6e-25
TAIR|locus:2117537	190	AT4G25780 "AT4G25780" [Arabido	0.888	0.710	0.381	1e-22
TAIR|locus:2055240	161	PRB1 "AT2G14580" [Arabidopsis	0.861	0.813	0.405	3.4e-22
TAIR|locus:2005537	176	PR-1-LIKE "AT2G19990" [Arabido	0.881	0.761	0.384	4.3e-22

TAIR|locus:2154835 AT5G66590 "AT5G66590" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 91/153 (59%), Positives = 112/153 (73%)

Query:     1 SADGKPAPVLPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFAN 60
             S    P P + AAA+ F +AHN ARA VGV PL WS+ L    +R+ R+QRN+  C+FA+
Sbjct:    33 STSPPPPPTISAAAKAFTDAHNKARAMVGVPPLVWSQTLEAAASRLARYQRNQKKCEFAS 92

Query:    61 LTSGKYGANQLWGSGM-AVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSL 119
             L  GKYGANQLW  G+ AVTP +AV+ WV EK FYN+  ++CA NH CGVYKQVVWR S 
Sbjct:    93 LNPGKYGANQLWAKGLVAVTPSLAVETWVKEKPFYNYKSDTCAANHTCGVYKQVVWRNSK 152

Query:   120 ELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY 152
             ELGCAQATC K+   LT+CFY+PPGN+IG+ PY
Sbjct:   153 ELGCAQATCTKESTVLTICFYNPPGNVIGQKPY 185

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134178 AT4G33720 "AT4G33720" [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 65/138 (47%), Positives = 83/138 (60%)

Query:    15 REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
             ++FL  HN ARA VGV PL+W EK+          QR K  C   + +SG YG N  W S
Sbjct:    31 QDFLAVHNRARAEVGVGPLRWDEKVAAYARNYAN-QR-KGDCAMKH-SSGSYGENIAWSS 87

Query:    75 GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT 134
             G ++T   AVD WV+E+  Y++  N+CA + +CG Y QVVWR S  LGCA+  C   Q  
Sbjct:    88 G-SMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRCNNGQTF 146

Query:   135 LTVCFYDPPGNIIGESPY 152
             +T C YDPPGN +GE PY
Sbjct:   147 IT-CNYDPPGNWVGEWPY 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504954862 AT5G57625 "AT5G57625" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 63/147 (42%), Positives = 78/147 (53%)

Query:     8 PVLPAA--AREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGK 65
             P LPA   AR FL+ HN  R+ +G+ PL W  KL +        QR +  C   + T G 
Sbjct:    64 PSLPAGSIARLFLDPHNALRSGLGLPPLIWDGKLASYATWWAN-QR-RYDCSLTHST-GP 120

Query:    66 YGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQ 125
             YG N  WGSG +  P  AV +W+ E   YNH  NSC  +  CG Y Q+VWR +  LGCA+
Sbjct:   121 YGENLFWGSGSSWAPGFAVQSWIVEGRSYNHNTNSCDGSGMCGHYTQMVWRDTKRLGCAR 180

Query:   126 ATCVKQQVTLTVCFYDPPGNIIGESPY 152
               C         C YDPPGN +GE PY
Sbjct:   181 VVCENGAGVFITCNYDPPGNYVGEKPY 207

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2125244 AT4G31470 "AT4G31470" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 58/138 (42%), Positives = 80/138 (57%)

Query:    15 REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
             ++FL  HN+ RA + + PLKWS  L    +R  R +R    C+  + + G YG N  WGS
Sbjct:    52 QQFLRPHNILRAKLRLPPLKWSNSLALYASRWARTRRGD--CKLIH-SGGPYGENLFWGS 108

Query:    75 GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT 134
             G   TPR AV AW +E  +Y+   + C  N  C  Y Q+VW+KS  +GCA + C K   T
Sbjct:   109 GKGWTPRDAVAAWASEMKYYDRRTSHCKANGDCLHYTQLVWKKSSRIGCAISFC-KTGDT 167

Query:   135 LTVCFYDPPGNIIGESPY 152
               +C YDPPGNI+G+ P+
Sbjct:   168 FIICNYDPPGNIVGQPPF 185

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117547 AT4G25790 "AT4G25790" [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 55/138 (39%), Positives = 73/138 (52%)

Query:    15 REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
             ++FL+ HN  R  +G+ PL W  K+ +        QR +  C   + T G YG N  WGS
Sbjct:    76 QQFLDPHNTVRGGLGLPPLVWDVKIASYATWWAN-QR-RYDCSLTHST-GPYGENLFWGS 132

Query:    75 GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT 134
             G   T   AV++W  E   YNH  N+C  +  CG Y Q+VWR++  LGCA+  C      
Sbjct:   133 GSDFTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGCARVVCENGAGV 192

Query:   135 LTVCFYDPPGNIIGESPY 152
                C YDPPGN +GE PY
Sbjct:   193 FITCNYDPPGNYVGEKPY 210

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:2064294 PR1 "AT2G14610" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 64/150 (42%), Positives = 85/150 (56%)

Query:     7 APVLPAAARE----FLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLT 62
             A VLP+ A++    +L  HN AR AVGV P++W E++           R    C+  + +
Sbjct:    19 ALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN--CRLIH-S 75

Query:    63 SGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELG 122
              G YG N  WGSG  ++   AV+ WV+EK  YN+A N+C  N  CG Y QVVWRKS+ LG
Sbjct:    76 GGPYGENLAWGSG-DLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRKSVRLG 132

Query:   123 CAQATCVKQQVTLTVCFYDPPGNIIGESPY 152
             CA+  C     T+  C YDP GN + E PY
Sbjct:   133 CAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0009627 "systemic acquired resistance" evidence=IEP;RCA

GO:0005618 "cell wall" evidence=IDA

GO:0010266 "response to vitamin B1" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0006952 "defense response" evidence=TAS

TAIR|locus:2035317 AT1G01310 "AT1G01310" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 59/141 (41%), Positives = 79/141 (56%)

Query:    13 AAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMG-CQFANLTSGKYGANQL 71
             A+REFL AHNL RA VG  P +W  +L     R    QR  +G C+  + ++G YG N  
Sbjct:    84 ASREFLIAHNLVRARVGEPPFQWDGRLA-AYARTWANQR--VGDCRLVH-SNGPYGENIF 139

Query:    72 WGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQ 131
             W      +PR  V+ W +E  FY+   N+C P H CG Y Q+VWR S ++GCA   C   
Sbjct:   140 WAGKNNWSPRDIVNVWADEDKFYDVKGNTCEPQHMCGHYTQIVWRDSTKVGCASVDCSNG 199

Query:   132 QVTLTVCFYDPPGNIIGESPY 152
              V   +C Y+PPGN  GE+P+
Sbjct:   200 GV-YAICVYNPPGNYEGENPF 219

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117537 AT4G25780 "AT4G25780" [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 53/139 (38%), Positives = 76/139 (54%)

Query:    16 EFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKY--GANQLWG 73
             +FL  HNL RAA    PL W  +L N        +R     + + +++G++  G N  WG
Sbjct:    54 QFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHS-VSNGEFNLGENIYWG 112

Query:    74 SGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQV 133
              G   +P  AV AW +EK FY++  N+C     CG Y Q+VW+ +  +GCA+  C    +
Sbjct:   113 YGANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVCDNGGI 172

Query:   134 TLTVCFYDPPGNIIGESPY 152
              +T C YDPPGN IG+ PY
Sbjct:   173 FMT-CNYDPPGNYIGQKPY 190

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2055240 PRB1 "AT2G14580" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 56/138 (40%), Positives = 77/138 (55%)

Query:    15 REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
             ++++ AHN AR+ +GV P++W E L           + K  C+  + + G YG N L  S
Sbjct:    31 QDYVNAHNQARSQIGVGPMQWDEGLAAYARNYAN--QLKGDCRLVH-SRGPYGEN-LAKS 86

Query:    75 GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT 134
             G  ++   AV+ WVNEK  YN+  N+C  N  CG Y QVVWR S+ LGCA+  C     T
Sbjct:    87 GGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRC-NNGGT 143

Query:   135 LTVCFYDPPGNIIGESPY 152
             +  C YDPPGN   + PY
Sbjct:   144 IISCNYDPPGNYANQKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0009723 "response to ethylene stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

TAIR|locus:2005537 PR-1-LIKE "AT2G19990" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 53/138 (38%), Positives = 73/138 (52%)

Query:    15 REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
             +E L  HN ARA VGV P+ W+E L          +R +  C   + + G +G N   G 
Sbjct:    43 QETLVVHNKARAMVGVGPMVWNETLATYAQSYAH-ERAR-DCAMKH-SLGPFGENLAAGW 99

Query:    75 GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT 134
             G    P +A + W+ EK  Y++  N+C  +  CG Y Q+VWR S+ LGCA   C   +  
Sbjct:   100 GTMSGP-VATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYI 158

Query:   135 LTVCFYDPPGNIIGESPY 152
               +C YDPPGN IG+ PY
Sbjct:   159 WVICSYDPPGNYIGQRPY 176

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0042742 "defense response to bacterium" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00050427 hypothetical protein (183 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	152
cd05381	136	cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like ex	1e-60
smart00198	144	smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 fa	3e-23
cd05382	132	cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-lik	3e-20
cd05384	129	cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like ex	4e-20
cd00168	122	cd00168, SCP, SCP: SCP-like extracellular protein	3e-16
cd05380	144	cd05380, SCP_euk, SCP_euk: SCP-like extracellular	2e-15
cd05559	136	cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracel	2e-15
cd05385	144	cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-l	5e-14
pfam00188	121	pfam00188, CAP, Cysteine-rich secretory protein fa	7e-13
cd05383	138	cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellu	2e-05

>gnl|CDD|240181 cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

 Score =  183 bits (466), Expect = 1e-60
 Identities = 61/139 (43%), Positives = 79/139 (56%), Gaps = 3/139 (2%)

Query: 14  AREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWG 73
            ++FL+AHN ARAAVGV PLKW + L     R    +R    C   +     YG N  WG
Sbjct: 1   PQDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRR--GDCALVHSNGP-YGENLFWG 57

Query: 74  SGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQV 133
           SG   +   AV +WV+EK +Y++  N+CA    CG Y QVVWR +  +GCA+ TC     
Sbjct: 58  SGGNWSAADAVASWVSEKKYYDYDSNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGG 117

Query: 134 TLTVCFYDPPGNIIGESPY 152
              +C YDPPGN IG+ PY
Sbjct: 118 VFIICNYDPPGNYIGQRPY 136

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|214553 smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

 Score = 88.6 bits (220), Expect = 3e-23
 Identities = 45/150 (30%), Positives = 61/150 (40%), Gaps = 25/150 (16%)

Query: 12  AAAREFLEAHNLARAAVG-----------VAPLKWSEKLGNGTNRVVRFQRNKMGCQFAN 60
           A  +E L+AHN  R+ V            +  L W  +L +        Q     C F +
Sbjct: 1   AQQQEILDAHNKLRSQVAGGFLAAPAASNMLKLTWDCELASSA------QNWANQCPFGH 54

Query: 61  LTS-GKYGANQLWGSGMA----VTPRMAVDAWVNEKTFYNHADNSCAP-NHRCGVYKQVV 114
            T    YG N  W S            AV  W +E   Y ++ N+C   N + G Y QVV
Sbjct: 55  STPRPGYGENLAWWSSSTALPDTYASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVV 114

Query: 115 WRKSLELGCAQATCVKQQV--TLTVCFYDP 142
           W K+ ++GC  A C       T+ VC YDP
Sbjct: 115 WAKTYKVGCGVANCPDGTKKKTVVVCNYDP 144

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function. Length = 144

>gnl|CDD|240182 cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

 Score = 80.3 bits (199), Expect = 3e-20
 Identities = 44/145 (30%), Positives = 60/145 (41%), Gaps = 27/145 (18%)

Query: 14  AREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFAN----------LTS 63
            +E L+AHN  RA  G  PLK  ++L             K   ++A            + 
Sbjct: 3   QKECLDAHNEYRALHGAPPLKLDKEL------------AKEAQKWAEKLASSGKLQHSSP 50

Query: 64  GKYGAN--QLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLEL 121
             YG N     GSG  +T   AVD+W NE   Y+        + + G + QVVW+ S EL
Sbjct: 51  SGYGENLAYASGSGPDLTGEEAVDSWYNEIKKYDFNKPG--FSSKTGHFTQVVWKSSTEL 108

Query: 122 GCAQATCVKQQVTLTVCFYDPPGNI 146
           G   A   K+     V  Y P GN+
Sbjct: 109 GVGVAK-SKKGCVYVVARYRPAGNV 132

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms. Length = 132

>gnl|CDD|240184 cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

 Score = 80.0 bits (198), Expect = 4e-20
 Identities = 45/140 (32%), Positives = 61/140 (43%), Gaps = 18/140 (12%)

Query: 14  AREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWG 73
           A   L+AHN  RA  GV PL W+  L                   A+ + G YG N    
Sbjct: 3   ASSILDAHNSKRALHGVQPLTWNNTLAEYAQDYA--NSYDCSGNLAH-SGGPYGEN---- 55

Query: 74  SGMAV---TPRMAVDAWVNEKTFY--NHADNSCAPNHRCGVYKQVVWRKSLELGCAQATC 128
             +A    +   AVDAW +E   Y  ++   S A  H    + Q+VW+ + ++GCA   C
Sbjct: 56  --LAAGYPSGTSAVDAWYDEIEDYDYSNPGFSEATGH----FTQLVWKSTTQVGCAYKDC 109

Query: 129 VKQQVTLTVCFYDPPGNIIG 148
                   VC YDP GN+IG
Sbjct: 110 GGAWGWYIVCEYDPAGNVIG 129

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune. Length = 129

>gnl|CDD|238097 cd00168, SCP, SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

 Score = 69.8 bits (171), Expect = 3e-16
 Identities = 38/119 (31%), Positives = 50/119 (42%), Gaps = 13/119 (10%)

Query: 14  AREFLEAHNLARAAV-GVAPLKWSEKLGNGTNRVVRFQRNKMGCQFAN---LTSGKYGAN 69
           A+E +  HN  RA V G+ P+ W  +L          Q     C F +      G  G N
Sbjct: 1   AQEVVRLHNSYRAKVNGMLPMSWDAELAK------TAQNYANRCIFKHSGEDGRGFVGEN 54

Query: 70  QLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATC 128
              GS   +T   AV AW NE   YN        +   G Y QVVW+ + ++GC  A C
Sbjct: 55  LAAGSY-DMTGPAAVQAWYNEIKNYNFG--QPGFSSGTGHYTQVVWKNTTKIGCGVAFC 110

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

>gnl|CDD|240180 cd05380, SCP_euk, SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

 Score = 68.7 bits (168), Expect = 2e-15
 Identities = 42/150 (28%), Positives = 57/150 (38%), Gaps = 30/150 (20%)

Query: 15  REFLEAHNLAR------------AAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLT 62
           +  L+AHN  R             A  +  LKW ++L          Q     C F +  
Sbjct: 2   QAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALA------QNWAKTCVFEHSP 55

Query: 63  ---SGKYGANQLW-----GSGMAVTPRMAVDAWVNEKTFYNHADNS-CAPNHRCGVYKQV 113
              +G  G N L      GS +      AV+AW NE   Y    N     N   G + Q+
Sbjct: 56  CRNTGGVGQN-LAAGSSTGSTVEELAEDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQM 114

Query: 114 VWRKSLELGCAQATC--VKQQVTLTVCFYD 141
           VW K+ ++GCA A C       T+ VC Y 
Sbjct: 115 VWAKTTKVGCAVARCGKDGGNKTVVVCNYS 144

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240186 cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

 Score = 67.9 bits (166), Expect = 2e-15
 Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 67  GANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQA 126
           G N    +G       AV+ W NEK  YN+  N+CAPN  CG Y QVVW  + ++GC   
Sbjct: 56  GENLFISTGPPFDATKAVEDWNNEKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSY 115

Query: 127 TCVKQQV------TLTVCFY 140
            C   +V      TL VC Y
Sbjct: 116 FCETLEVLRWENATLLVCNY 135

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240185 cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

 Score = 64.3 bits (157), Expect = 5e-14
 Identities = 45/149 (30%), Positives = 61/149 (40%), Gaps = 28/149 (18%)

Query: 15  REFLEAHNLARAAV-----GVAPLKWSEKLGNGTNRVVRFQRNKMGCQFA-NLTSGKYGA 68
            E +  HN  R+ V      +  + W   L     +  R    K  C+F  N+  GK   
Sbjct: 4   DECVRIHNELRSKVSPPAANMRYMTWDAALA----KTARAWAKK--CKFKHNIYLGKRYK 57

Query: 69  ---------NQLW-GSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKS 118
                      +W GS    +P+ AV +W NE  FY+   NSC  +  CG Y QVVW  S
Sbjct: 58  CHPKFTSVGENIWLGSIYIFSPKNAVTSWYNEGKFYDFDTNSC--SRVCGHYTQVVWATS 115

Query: 119 LELGCAQATCVK----QQVTLTVCFYDPP 143
            ++GCA A C          + VC Y P 
Sbjct: 116 YKVGCAVAFCPNLGGIPNAAIFVCNYAPA 144

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|215778 pfam00188, CAP, Cysteine-rich secretory protein family

 Score = 61.1 bits (148), Expect = 7e-13
 Identities = 36/127 (28%), Positives = 45/127 (35%), Gaps = 10/127 (7%)

Query: 18  LEAHNLARAAVGVAP-LKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGM 76
           L  HN  R+A G AP L W   L          Q +   C         YG N    S  
Sbjct: 1   LNLHNELRSAAGGAPPLSWDPTLAAAA------QDHAAYCADNGYFGHDYGENLALVSVA 54

Query: 77  AVTPRM---AVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQV 133
                    AV+ W +E   Y+ A    A     G    ++W KS ++GCA A C     
Sbjct: 55  GKADDPGVAAVENWYDEAKDYDAAVGINAWMSSPGHRTNLLWPKSTKVGCAVAKCGDGSS 114

Query: 134 TLTVCFY 140
              VC Y
Sbjct: 115 YYVVCNY 121

This is a large family of cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) that are found in a wide range of organisms, including prokaryotes and non-vertebrate eukaryotes, The nine subfamilies of the mammalian CAP 'super'family include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins. Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP 'super'family results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences. The Ca++-chelating function would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine from Heloderma horridum horridum blocks the Ca++ transporting ryanodine receptors. Length = 121

>gnl|CDD|240183 cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 83  AVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT-LTVCFYD 141
            + AW +E   + +   +  P    G Y Q+VW KS  +GCA A C   +     VC Y 
Sbjct: 77  VIQAWYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYC 136

Query: 142 PP 143
           P 
Sbjct: 137 PA 138

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. One member, DE or CRISP-1, has been shown to mediate gamete fusion by binding to the egg surface; a sequence motif in the SCP domain plays a role in that binding. Length = 138

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
cd05381	136	SCP_PR-1_like SCP_PR-1_like: SCP-like extracellula	100.0
cd05384	129	SCP_PRY1_like SCP_PRY1_like: SCP-like extracellula	100.0
cd05382	132	SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracel	100.0
cd05383	138	SCP_CRISP SCP_CRISP: SCP-like extracellular protei	100.0
cd05385	144	SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extrac	100.0
smart00198	144	SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extra	100.0
cd05559	136	SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular prot	100.0
KOG3017	225	consensus Defense-related protein containing SCP d	100.0
cd00168	122	SCP SCP: SCP-like extracellular protein domain, fo	100.0
cd05380	144	SCP_euk SCP_euk: SCP-like extracellular protein do	100.0
PF00188	124	CAP: Cysteine-rich secretory protein family; Inter	99.9
TIGR02909	127	spore_YkwD uncharacterized protein, YkwD family. M	99.85
cd05379	122	SCP_bacterial SCP_bacterial: SCP-like extracellula	99.73
COG2340	207	Uncharacterized protein with SCP/PR1 domains [Func	99.43

>cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

Probab=100.00  E-value=1.5e-44  Score=245.40  Aligned_cols=135  Identities=46%  Similarity=0.930  Sum_probs=121.0

Q ss_pred             HHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCCCCCcceEEeccCCCCCHHHHHHHHHhhhhcC
Q 037670           15 REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFY   94 (152)
Q Consensus        15 ~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~~~~Gen~~~~~~~~~~~~~~v~~W~~e~~~y   94 (152)
                      ++||+.||.+|+.++|++|+||++|+..||.||++|+.  +|. ..++...+||||++.......+.++|+.|++|...|
T Consensus         2 ~~il~~hN~~R~~~~~~~L~Wd~~La~~A~~~a~~~~~--~c~-~~~~~~~~GeNi~~~~~~~~~~~~~v~~W~~e~~~y   78 (136)
T cd05381           2 QDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRG--DCA-LVHSNGPYGENLFWGSGGNWSAADAVASWVSEKKYY   78 (136)
T ss_pred             hHHHHHHHHHHHhcCCCcceECHHHHHHHHHHHHHhcC--CCC-cccCCCCCCceEEEecCCCCCHHHHHHHHHhccccC
Confidence            68999999999999999999999999999999999883  484 456666699999987654567889999999999999


Q ss_pred             CCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEecCCCCCCCCCCC
Q 037670           95 NHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY  152 (152)
Q Consensus        95 ~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  152 (152)
                      ++..+.+..+..++|||||||+++++||||++.|.++...+|||+|+|+||+.|++||
T Consensus        79 ~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vvC~Y~p~gn~~g~~~Y  136 (136)
T cd05381          79 DYDSNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVFIICNYDPPGNYIGQRPY  136 (136)
T ss_pred             CCCCCCcCCCccchHHHHHHHHhcCEeceEEEEeCCCCcEEEEEEeeCCCCCCCCCCC
Confidence            9988877766789999999999999999999999875568999999999999999999

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

Probab=100.00  E-value=2e-40  Score=223.26  Aligned_cols=129  Identities=33%  Similarity=0.549  Sum_probs=111.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCCCCCcceEEeccCCCCCHHHHHHHHHhhh
Q 037670           12 AAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEK   91 (152)
Q Consensus        12 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~~~~Gen~~~~~~~~~~~~~~v~~W~~e~   91 (152)
                      ++++.||+.||.+|+.++|++|+||.+|+..||.||++|+..  | ...|....+|||++.+.   .++.++|+.|++|.
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~~L~w~~~La~~A~~~a~~c~~~--~-~~~~~~~~~geNi~~~~---~~~~~~v~~W~~e~   74 (129)
T cd05384           1 SFASSILDAHNSKRALHGVQPLTWNNTLAEYAQDYANSYDCS--G-NLAHSGGPYGENLAAGY---PSGTSAVDAWYDEI   74 (129)
T ss_pred             CHHHHHHHHHHHHHHHcCCCcCccCHHHHHHHHHHHHHhccC--C-ceecCCCCCCcEEEEec---CCHHHHHHHHHhhh
Confidence            378999999999999999999999999999999999997633  2 24556667999998754   26889999999999


Q ss_pred             hcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEecCCCCCCC
Q 037670           92 TFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIG  148 (152)
Q Consensus        92 ~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g  148 (152)
                      ..|++..+.+.  ..++|||||||+++++||||++.|......++||+|+|+||+.|
T Consensus        75 ~~y~~~~~~~~--~~~~h~tqmvw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~Gn~~g  129 (129)
T cd05384          75 EDYDYSNPGFS--EATGHFTQLVWKSTTQVGCAYKDCGGAWGWYIVCEYDPAGNVIG  129 (129)
T ss_pred             hhCCCCCCCCC--CcccchhhhhhhccceeeeEEEEeCCCCeEEEEEEEECCCCCCc
Confidence            99999876543  67999999999999999999999987545789999999999875

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune.

>cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

Probab=100.00  E-value=2.8e-40  Score=223.10  Aligned_cols=130  Identities=32%  Similarity=0.495  Sum_probs=111.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCCCCCcceEEeccC--CCCCHHHHHHHHHh
Q 037670           12 AAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSG--MAVTPRMAVDAWVN   89 (152)
Q Consensus        12 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~~~~Gen~~~~~~--~~~~~~~~v~~W~~   89 (152)
                      ++++.||+.||.+|+.++|++|+||++|+..||.||++|+..++  ..+.+...+|||+++...  ....+.++|+.|++
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~~L~wd~~La~~A~~~a~~c~~~~~--~~h~~~~~~GeN~~~~~~~~~~~~~~~~v~~W~~   78 (132)
T cd05382           1 DFQKECLDAHNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGK--LQHSSPSGYGENLAYASGSGPDLTGEEAVDSWYN   78 (132)
T ss_pred             CHHHHHHHHHHHHHHHcCCCcCeeCHHHHHHHHHHHHHhhhcCc--eeCCCCCCCCceeEEecCCCCCCCHHHHHHHHHh
Confidence            37899999999999999999999999999999999999877654  223333368999998764  45688999999999


Q ss_pred             hhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEecCCCCC
Q 037670           90 EKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNI  146 (152)
Q Consensus        90 e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~gn~  146 (152)
                      |...|++..+...  ..++||+||||+++++||||++.|..+ .+++||+|+|+||+
T Consensus        79 e~~~y~~~~~~~~--~~~gh~tqmvw~~t~~vGCa~~~~~~~-~~~~vC~Y~p~Gn~  132 (132)
T cd05382          79 EIKKYDFNKPGFS--SKTGHFTQVVWKSSTELGVGVAKSKKG-CVYVVARYRPAGNV  132 (132)
T ss_pred             ccccCCCCCCCCC--CCCCCeEEeEecCCCceeeEEEEcCCC-CEEEEEEEeCCCCC
Confidence            9999998755433  579999999999999999999999875 47899999999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms.

>cd05383 SCP_CRISP SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

Probab=100.00  E-value=4.9e-38  Score=213.92  Aligned_cols=130  Identities=23%  Similarity=0.386  Sum_probs=107.4

Q ss_pred             HHHHHHHHHHHHHhhC-----CCCCCccCHHHHHHHHHHHHhhhhcCC-CccccCCCCCCcceEEeccCCCCCHHHHHHH
Q 037670           13 AAREFLEAHNLARAAV-----GVAPLKWSEKLGNGTNRVVRFQRNKMG-CQFANLTSGKYGANQLWGSGMAVTPRMAVDA   86 (152)
Q Consensus        13 ~~~~il~~hN~~R~~~-----~m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~~~~~~~~Gen~~~~~~~~~~~~~~v~~   86 (152)
                      .++.||+.||.+|+.+     +|++|+||++||..||.||++|...++ |.........+|||++.... ...+.++|+.
T Consensus         2 ~~~~il~~HN~~R~~~~p~a~~M~~l~Wd~~La~~A~~~a~~C~~~~~~~~~~~~~~~~~GeNl~~~~~-~~~~~~av~~   80 (138)
T cd05383           2 VQKEIVDLHNELRRSVNPTASNMLKMEWNEEAAQNAKKWANTCNLTHSPPNGRTIGGITCGENIFMSSY-PRSWSDVIQA   80 (138)
T ss_pred             HHHHHHHHHHHHhccCCCCcccCcccEeCHHHHHHHHHHHhcCCCcCCchhhcccCCCCcceeeeccCC-CCCHHHHHHH
Confidence            5789999999999998     477899999999999999999654443 21111123458999997653 3577899999


Q ss_pred             HHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCC-CcEEEEEEecCC
Q 037670           87 WVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQ-QVTLTVCFYDPP  143 (152)
Q Consensus        87 W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~-~~~~~vC~Y~p~  143 (152)
                      ||+|...|+|..+.+..+..++|||||||++|++||||++.|..+ ..+++||+|+|+
T Consensus        81 W~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~vC~Y~P~  138 (138)
T cd05383          81 WYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYCPA  138 (138)
T ss_pred             HHHHHHhCCCCCCCCCCCCchhhHHHHHHHhccccceEEEECCCCCcCEEEEEecCCC
Confidence            999999999988776666889999999999999999999999875 257899999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ t

>cd05385 SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

Probab=100.00  E-value=7.4e-38  Score=214.45  Aligned_cols=129  Identities=31%  Similarity=0.558  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHHhhC-----CCCCCccCHHHHHHHHHHHHhhhhcCC-Ccccc-----CCCCCCcceEEeccCCCCCH
Q 037670           12 AAAREFLEAHNLARAAV-----GVAPLKWSEKLGNGTNRVVRFQRNKMG-CQFAN-----LTSGKYGANQLWGSGMAVTP   80 (152)
Q Consensus        12 ~~~~~il~~hN~~R~~~-----~m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~~-----~~~~~~Gen~~~~~~~~~~~   80 (152)
                      +|+++||+.||.+|+.+     +|++|+||++|+..||.||++|...++ | ...     .....+||||++.......+
T Consensus         1 ~f~~~~L~~HN~~R~~~~p~a~~m~~l~Wd~~La~~Aq~~a~~C~~~~~~~-~~~~~~~~~~~~~~GeNi~~~~~~~~~~   79 (144)
T cd05385           1 EFIDECVRIHNELRSKVSPPAANMRYMTWDAALAKTARAWAKKCKFKHNIY-LGKRYKCHPKFTSVGENIWLGSIYIFSP   79 (144)
T ss_pred             CHHHHHHHHHHHHHhhCCCCcccCcccccCHHHHHHHHHHHhcCCCCCCch-hhcccccccccCcccceeeecccCCCCH
Confidence            47899999999999999     699999999999999999999765544 3 111     11246899998776555688


Q ss_pred             HHHHHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCC----cEEEEEEecCC
Q 037670           81 RMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQ----VTLTVCFYDPP  143 (152)
Q Consensus        81 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~----~~~~vC~Y~p~  143 (152)
                      .++|+.||+|...|+|..+.+.  ..++|||||||++|++||||++.|.+++    ..+|||+|+|+
T Consensus        80 ~~av~~W~~e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCa~~~c~~~~~~~~~~~vVC~Y~p~  144 (144)
T cd05385          80 KNAVTSWYNEGKFYDFDTNSCS--RVCGHYTQVVWATSYKVGCAVAFCPNLGGIPNAAIFVCNYAPA  144 (144)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC--CcccCHHHHHHhhccccceEEEECCCCCCccccEEEEEeCCCC
Confidence            9999999999999999877665  5899999999999999999999998753    36899999984

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

Probab=100.00  E-value=1.9e-37  Score=212.05  Aligned_cols=125  Identities=34%  Similarity=0.663  Sum_probs=106.6

Q ss_pred             HHHHHHHHHHHHHhhCC-----------CCCCccCHHHHHHHHHHHHhhhhcCCCccccCCCCCCcceEEeccC----CC
Q 037670           13 AAREFLEAHNLARAAVG-----------VAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSG----MA   77 (152)
Q Consensus        13 ~~~~il~~hN~~R~~~~-----------m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~~~~Gen~~~~~~----~~   77 (152)
                      .++.||+.||.+|+.++           |++|+||++||..|+.||++      |...+.....+|||+++...    ..
T Consensus         2 ~~~~iL~~HN~~R~~~a~G~~~~p~a~~m~~l~Wd~~La~~A~~~a~~------C~~~~~~~~~~GeNi~~~~~~~~~~~   75 (144)
T smart00198        2 QQQEILDAHNKLRSQVAKGLLANPAASNMLKLTWDCELASSAQNWANQ------CPFGHSTPRGYGENLAWWSSSTDLPI   75 (144)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccccccccCCHHHHHHHHHHHHh------CCCcCCCcCCcCcceEEecccCcccc
Confidence            58899999999999998           99999999999999999999      53222222378999998653    33


Q ss_pred             CCHHHHHHHHHhhhhcCCCCCCCCCC-CCCcchHHHHHHhhcceeeEEEEEeCCCCc--EEEEEEecCC
Q 037670           78 VTPRMAVDAWVNEKTFYNHADNSCAP-NHRCGVYKQVVWRKSLELGCAQATCVKQQV--TLTVCFYDPP  143 (152)
Q Consensus        78 ~~~~~~v~~W~~e~~~y~~~~~~~~~-~~~~~hftq~vw~~t~~vGCa~~~c~~~~~--~~~vC~Y~p~  143 (152)
                      ..+..+|+.||+|...|++..+.+.. +..++|||||||+++++||||++.|.++..  .++||+|+|+
T Consensus        76 ~~~~~av~~W~~e~~~y~~~~~~~~~~~~~~~hftqmvw~~s~~vGCa~~~c~~~~~~~~~~vC~Y~P~  144 (144)
T smart00198       76 TYASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKTYKVGCGVSNCPDGTKKKTVVVCNYDPP  144 (144)
T ss_pred             hhHHHHHHHHHHHHHHcCCCCCccccCccchhHHHHHHHHhcCCcceEEEECCCCCcceEEEEEecCCC
Confidence            57788999999999999998877654 578999999999999999999999987742  6899999995

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.

>cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

Probab=100.00  E-value=1.8e-36  Score=205.74  Aligned_cols=124  Identities=31%  Similarity=0.552  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHHhhCC-----CCCCccCHHHHHHHHHHHHhhhhcCC-CccccCCCCCCcceEEeccCCCCCHHHHHHHH
Q 037670           14 AREFLEAHNLARAAVG-----VAPLKWSEKLGNGTNRVVRFQRNKMG-CQFANLTSGKYGANQLWGSGMAVTPRMAVDAW   87 (152)
Q Consensus        14 ~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~~~~~~~~Gen~~~~~~~~~~~~~~v~~W   87 (152)
                      |+.||+.||.+|+.++     |.+|+||++||..||.||++|...++ |    .....+||||+...+....+.++|+.|
T Consensus         1 r~~il~~HN~~R~~~~p~a~~m~~L~Wd~~La~~A~~~a~~C~~~~~~~----~~~~~~GeNl~~~~~~~~~~~~~v~~W   76 (136)
T cd05559           1 RLNLVDLHNQYRSQVSPPAANMLKMTWDEELAALAEAYARKCIWDHNPD----RGHLRVGENLFISTGPPFDATKAVEDW   76 (136)
T ss_pred             CcHHHHHHHHHHhhCCCccccCcccccCHHHHHHHHHHHHhccccCCCc----ccCCCceeeeeecCCCCCCHHHHHHHH
Confidence            4789999999999984     77899999999999999999443322 1    011368999998765556789999999


Q ss_pred             HhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCC------CcEEEEEEec
Q 037670           88 VNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQ------QVTLTVCFYD  141 (152)
Q Consensus        88 ~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~------~~~~~vC~Y~  141 (152)
                      ++|...|++..+.+..+..++|||||||++|++||||++.|.+.      ...++||+|+
T Consensus        77 ~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~~~~~~vC~Y~  136 (136)
T cd05559          77 NNEKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCETLEVLRWENATLLVCNYG  136 (136)
T ss_pred             HHHHHhcCCCCCCCCCCCcccchHHHHHhccCccceEEEECCCCCCCCcccCEEEEecCC
Confidence            99999999988877766789999999999999999999999753      2478999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>KOG3017 consensus Defense-related protein containing SCP domain [Function unknown]

Probab=100.00  E-value=4e-36  Score=219.54  Aligned_cols=139  Identities=36%  Similarity=0.673  Sum_probs=119.9

Q ss_pred             hHHHHHHHHHHHHHHhhCC-----CCCCccCHHHHHHHHHHHHhhhhcCC-CccccC-CCCCCcceEEeccCC------C
Q 037670           11 PAAAREFLEAHNLARAAVG-----VAPLKWSEKLGNGTNRVVRFQRNKMG-CQFANL-TSGKYGANQLWGSGM------A   77 (152)
Q Consensus        11 ~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~~~-~~~~~Gen~~~~~~~------~   77 (152)
                      .+++++|++.||.+|..+.     |++|+||++||..||.||++|...++ |   .+ ....+||||++....      .
T Consensus        39 ~~~~~~~~~~hn~~r~~~~~~as~m~~m~Wd~~La~~Aq~~a~~c~~~~~~~---~~~~~~~~GeNl~~~~~~~~~~~~~  115 (225)
T KOG3017|consen   39 NNLRSEILNGHNVARGAVGPPASNMMKLKWDDELAALAQNWANTCPFGHDKC---VHTSFGPYGENLAWGWSSNPPLSLD  115 (225)
T ss_pred             HHHHHHHHhhhHHhcCccCCchHhCccccCCHHHHHHHHHHHhhCCcccCcc---ccccCCCCcccceeeccCCCCcccc
Confidence            4899999999999999998     99999999999999999999877654 3   22 356679999986643      1


Q ss_pred             CCHHHHHHHHHhhhhcCCCCCCCCCC---CCCcchHHHHHHhhcceeeEEEEEeCCCC----cEEEEEEecCCCCCCC-C
Q 037670           78 VTPRMAVDAWVNEKTFYNHADNSCAP---NHRCGVYKQVVWRKSLELGCAQATCVKQQ----VTLTVCFYDPPGNIIG-E  149 (152)
Q Consensus        78 ~~~~~~v~~W~~e~~~y~~~~~~~~~---~~~~~hftq~vw~~t~~vGCa~~~c~~~~----~~~~vC~Y~p~gn~~g-~  149 (152)
                      .....++..|+.|...|++..+.+..   +..+||||||||++|++||||++.|.++.    .+++||+|+|+||..+ +
T Consensus       116 ~~~~~a~~~w~~e~~~~~~~~~~~~~~~~~~~~gHyTQ~vw~~s~~vGCgv~~c~~~~~~~~~~~~vC~Y~p~g~~~~~~  195 (225)
T KOG3017|consen  116 TSGALAVEAWESEFQEYDWSSNTCSSADFGEGIGHYTQMVWAKSTKVGCGVVRCGNGSNGYNTVAVVCNYDPPGNNINGE  195 (225)
T ss_pred             ccHHHHHHHHHHHHHHccCcccccCcccCCCcceEEEEEEEeCCceeceeeccCCCCCCCcceEEEEEEeecCCCCcCCC
Confidence            56778999999999999999998874   67899999999999999999999999885    6899999999966555 5


Q ss_pred             CCC
Q 037670          150 SPY  152 (152)
Q Consensus       150 ~~Y  152 (152)
                      .||
T Consensus       196 ~~y  198 (225)
T KOG3017|consen  196 IPY  198 (225)
T ss_pred             CcC
Confidence            776

>cd00168 SCP SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

Probab=100.00  E-value=6.5e-35  Score=194.48  Aligned_cols=119  Identities=32%  Similarity=0.490  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHhhC-CCCCCccCHHHHHHHHHHHHhhhhcCC-CccccCCCCCCcceEEeccCCCCCHHHHHHHHHhhhh
Q 037670           15 REFLEAHNLARAAV-GVAPLKWSEKLGNGTNRVVRFQRNKMG-CQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKT   92 (152)
Q Consensus        15 ~~il~~hN~~R~~~-~m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~~~~~~~~Gen~~~~~~~~~~~~~~v~~W~~e~~   92 (152)
                      ++||+.||.+|+.+ +|++|+||++|+..|+.||++|...++ |    .....+|||++++... .++..+|+.|++|..
T Consensus         2 ~~il~~hN~~R~~~a~~~~L~wd~~La~~A~~~a~~c~~~h~~~----~~~~~~geNi~~~~~~-~~~~~~v~~W~~e~~   76 (122)
T cd00168           2 QEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYANRCIFKHSGE----DGRGFVGENLAAGSYD-MTGPAAVQAWYNEIK   76 (122)
T ss_pred             cHHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhhccccCCCc----ccCCCCCceeEEecCC-CCHHHHHHHHHHHHH
Confidence            57999999999999 999999999999999999999433222 1    0113689999987643 678999999999999


Q ss_pred             cCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEec
Q 037670           93 FYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYD  141 (152)
Q Consensus        93 ~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~  141 (152)
                      .|+|..+...  ..++||+||||+++++||||++.|..+ ..++||+|+
T Consensus        77 ~y~~~~~~~~--~~~~h~~qmvw~~s~~vGca~~~~~~~-~~~~vC~Y~  122 (122)
T cd00168          77 NYNFGQPGFS--SGTGHYTQVVWKNTTKIGCGVAFCGSN-SYYVVCNYG  122 (122)
T ss_pred             hCCCCCCCCC--CCccchhhhhcccCCeeeeEEEEcCCC-CEEEEEeCc
Confidence            9999855443  679999999999999999999999975 478999995

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as

>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

Probab=100.00  E-value=2.5e-34  Score=196.13  Aligned_cols=124  Identities=32%  Similarity=0.539  Sum_probs=101.8

Q ss_pred             HHHHHHHHHHHHhhC------------CCCCCccCHHHHHHHHHHHHhhhhcCC-CccccCCCCCCcceEEeccCC----
Q 037670           14 AREFLEAHNLARAAV------------GVAPLKWSEKLGNGTNRVVRFQRNKMG-CQFANLTSGKYGANQLWGSGM----   76 (152)
Q Consensus        14 ~~~il~~hN~~R~~~------------~m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~~~~~~~~Gen~~~~~~~----   76 (152)
                      ++.||+.||.+|+.+            +|++|+||.+|+..|+.||++|...++ |.    ....+|||++.....    
T Consensus         1 ~~~il~~HN~~R~~~a~g~~~~~p~a~~m~~l~Wd~~La~~A~~~a~~C~~~~~~~~----~~~~~GeNl~~~~~~~~~~   76 (144)
T cd05380           1 RQAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALAQNWAKTCVFEHSPCR----NTGGVGQNLAAGSSTGSTV   76 (144)
T ss_pred             CcHHHHHHHHHHHHhhcCCCCCCCchhcCCcceeCHHHHHHHHHHHhcCCCcCCccc----CCCCCCcEEEEeccCCCCH
Confidence            468999999999999            899999999999999999999532222 10    013689999987643    


Q ss_pred             CCCHHHHHHHHHhhhhcCCCCCC-CCCCCCCcchHHHHHHhhcceeeEEEEEeCCC--CcEEEEEEec
Q 037670           77 AVTPRMAVDAWVNEKTFYNHADN-SCAPNHRCGVYKQVVWRKSLELGCAQATCVKQ--QVTLTVCFYD  141 (152)
Q Consensus        77 ~~~~~~~v~~W~~e~~~y~~~~~-~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~--~~~~~vC~Y~  141 (152)
                      ...+.++|+.||+|...|++... .+.....++|||||||+++++||||++.|...  ...++||+|+
T Consensus        77 ~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~~~~~~~~~~~~vC~Y~  144 (144)
T cd05380          77 EELAEDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVCNYS  144 (144)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcCcccccccchhHHHHHHHHhcCccceEEEEeecCCceEEEEEecCC
Confidence            23678999999999999999875 34455789999999999999999999999864  4589999995

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>PF00188 CAP: Cysteine-rich secretory protein family; InterPro: IPR014044 The cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) superfamily proteins are found in a wide range of organisms, including prokaryotes [] and non-vertebrate eukaryotes [], The nine subfamilies of the mammalian CAP superfamily include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins

Probab=99.90  E-value=8.6e-24  Score=138.21  Aligned_cols=117  Identities=29%  Similarity=0.509  Sum_probs=83.7

Q ss_pred             HHHHHHHH-hhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCCCCCcceEEeccCCCCCH---HHHHHHHHhhhhc
Q 037670           18 LEAHNLAR-AAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTP---RMAVDAWVNEKTF   93 (152)
Q Consensus        18 l~~hN~~R-~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~~~~Gen~~~~~~~~~~~---~~~v~~W~~e~~~   93 (152)
                      |+.||.+| ...++++|+||++|+..|+.+|+.      |..........|+++.+........   ...+..|+.+...
T Consensus         1 L~~~N~~R~~~~~~~~L~~d~~L~~~A~~~a~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (124)
T PF00188_consen    1 LDLHNEYRSAANGLPPLKWDPELAKAAQAHAKY------CANSNSLSHDSGENGSQSSRFGSYSDAQVTAVENWYSESKN   74 (124)
T ss_dssp             HHHHHHHHHBSSTBB--EE-HHHHHHHHHHHTT------TCSSEETTEESEEEEEEESSTTSHHHHHHHHHHHHHGGGGG
T ss_pred             CHHHHHHHHHhCCCCCCeeCHHHHHHHHHhhHH------hhhhcccccccCCCCccccccccccchhhHHHHHHHhcccc
Confidence            78999999 888888899999999999999999      5321222344678887655322211   1128999999988


Q ss_pred             CCCCC--CCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCc-EEEEEEe
Q 037670           94 YNHAD--NSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQV-TLTVCFY  140 (152)
Q Consensus        94 y~~~~--~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~-~~~vC~Y  140 (152)
                      +....  ........++||+||+|..+++||||++.|..+.. +++||.|
T Consensus        75 ~~~~~~~~~~~~~~~~~h~~~ll~~~~~~iGca~~~~~~~~~~~~~vc~y  124 (124)
T PF00188_consen   75 YNFQNQSIFNSWMNSPGHFTNLLWPNTTRIGCAVANCPNGKNNYYWVCNY  124 (124)
T ss_dssp             EETTCSTEESSTTSTCHHHHHHT-TT--EEEEEEEEETTSSSEEEEEEEE
T ss_pred             cccccchhhhccCCchhhhhhhhcCCCCEEEEEEEEeCCCCeeEEEEEEC
Confidence            87762  12223367899999999999999999999998865 8999998

Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP superfamily results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences []. The Ca++-chelating function [] would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how Q91055 from SWISSPROT blocks the Ca++ transporting ryanodine receptors. This entry represents the CAP domain common to all members of the CAP superfamily. The CAP domain forms a unique 3 layer alpha-beta-alpha fold with some, though not all, of the structural elements found in proteases [].; PDB: 3U3N_C 3U3U_C 3U3L_C 1U53_A 1RC9_A 1SMB_A 3NT8_B 1QNX_A 1WVR_A 3Q2U_A ....

>TIGR02909 spore_YkwD uncharacterized protein, YkwD family

Probab=99.85  E-value=2e-20  Score=125.52  Aligned_cols=108  Identities=21%  Similarity=0.250  Sum_probs=88.4

Q ss_pred             hHHHHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCC----------------CCCcceEEecc
Q 037670           11 PAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTS----------------GKYGANQLWGS   74 (152)
Q Consensus        11 ~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~----------------~~~Gen~~~~~   74 (152)
                      .++.+++|+.||.+|..+|++||+||+.|++.|+.||+.|+....  +.+..+                ..+||||+.+.
T Consensus         2 ~~~e~~~l~~iN~~R~~~Gl~pL~~~~~L~~~A~~hA~~ma~~~~--~~H~~~~~~~~~~r~~~~g~~~~~~gENi~~g~   79 (127)
T TIGR02909         2 TAEEKRVVELVNAERAKNGLKPLKADPELSKVARLKSEDMRDKNY--FSHTSPTYGSPFDMMKKFGISYRMAGENIAYGN   79 (127)
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHHhCCc--ccccCCCCCCHHHHHHHcCCCcccceeeeeccC
Confidence            467899999999999999999999999999999999999987643  222111                13599998654


Q ss_pred             CCCCCHHHHHHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEe
Q 037670           75 GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFY  140 (152)
Q Consensus        75 ~~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y  140 (152)
                         .++..+|+.|++                +.+|+++|+|++.++||||++.+.++. .|+|-.|
T Consensus        80 ---~~~~~~v~~W~~----------------S~gH~~nil~~~~~~~Gvg~~~~~~g~-~y~~q~F  125 (127)
T TIGR02909        80 ---STVEAVHNAWMN----------------SPGHRANILNPNYTEIGVGYVEGGSGG-IYWTQMF  125 (127)
T ss_pred             ---CCHHHHHHHHHc----------------CHhHHHHHcCCCcCeEeEEEEeCCCCC-eEEEEEe
Confidence               468899999986                468999999999999999999888764 5555544

Members of this protein family represent a subset of those belonging to Pfam family pfam00188 (SCP-like extracellular protein). Based on currently cuttoffs for this model, all member proteins are found in Bacteria capable of endospore formation. Members include a named but uncharacterized protein, YkwD of Bacillus subtilis. Only the C-terminal region is well-conserved and is included in the seed alignment for this model. Three members of this family have an N-terminal domain homologous to the spore coat assembly protein SafA.

>cd05379 SCP_bacterial SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

Probab=99.73  E-value=7.9e-17  Score=106.45  Aligned_cols=104  Identities=26%  Similarity=0.321  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCC----------------CCCcceEEeccCCCC
Q 037670           15 REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTS----------------GKYGANQLWGSGMAV   78 (152)
Q Consensus        15 ~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~----------------~~~Gen~~~~~~~~~   78 (152)
                      +.+++.+|.+|..++++||+||.+|+..|+.+|..|+..+.  ..+...                ..+|||++....   
T Consensus         2 ~~~~~~iN~~R~~~gl~pl~~~~~l~~~A~~~a~~~~~~~~--~~h~~~~~~~~~~~~~~~g~~~~~~~eni~~~~~---   76 (122)
T cd05379           2 QEALELINAYRAQNGLPPLTWDPALAAAAQAHARDMAANGY--FSHTGPDGSSPFDRARAAGYPYSSAGENIAYGYS---   76 (122)
T ss_pred             hHHHHHHHHHHHHcCCCCCccChHHHHHHHHHHHHHHhcCc--cCCcCCCCCCHHHHHHHcCCCcCccchhhcccCC---
Confidence            57899999999999999999999999999999999986542  222111                113899986552   


Q ss_pred             CHHHHHHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEe
Q 037670           79 TPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFY  140 (152)
Q Consensus        79 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y  140 (152)
                      .+.++|+.|++                ..+|+.+|+++..++||||++...++. .|+|..|
T Consensus        77 ~~~~~~~~w~~----------------~~~H~~~ll~~~~~~~Gvg~~~~~~~~-~y~~~~f  121 (122)
T cd05379          77 TAEAAVDGWMN----------------SPGHRANILNPDYTEVGVGVAYGGDGG-YYWVQVF  121 (122)
T ss_pred             CHHHHHHHHhC----------------CHhHHHHHcCCCcceeeEEEEeCCCCC-eEEEEec
Confidence            78999999986                367999999999999999999887653 5666654

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains.

>COG2340 Uncharacterized protein with SCP/PR1 domains [Function unknown]

Probab=99.43  E-value=1.3e-12  Score=94.52  Aligned_cols=100  Identities=26%  Similarity=0.396  Sum_probs=82.3

Q ss_pred             ChHHHHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCC----------------CCCcceEEec
Q 037670           10 LPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTS----------------GKYGANQLWG   73 (152)
Q Consensus        10 ~~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~----------------~~~Gen~~~~   73 (152)
                      ..++.+.+++.+|++|..+++++|+||.+|+..|+.++..|+..+.  +.+..+                ..+||||+.+
T Consensus        77 ~~~~~~~~~~~~N~~R~~~~l~~L~~n~~L~~~A~~~a~~m~~~g~--~sH~~~~g~~~~~r~~~~g~~~~~agENIa~g  154 (207)
T COG2340          77 LAQFEKAVVAETNQERAKHGLPPLAWNATLAKAARNHARDMAKNGY--FSHTSPTGETPADRLKKYGISGATAGENIAYG  154 (207)
T ss_pred             cchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHHHHHcCC--ccccCCCCCCHHHHHHhCCcccccccceeecC
Confidence            4678899999999999999999999999999999999999998664  222221                1379999977


Q ss_pred             cCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeC
Q 037670           74 SGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCV  129 (152)
Q Consensus        74 ~~~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~  129 (152)
                      ...  ....+|+.|++                +.||-.+|+-...+.+|.|++.-.
T Consensus       155 ~~~--~~~~~v~~Wl~----------------S~gH~~nll~~~~~~~Gv~~~~~~  192 (207)
T COG2340         155 SND--PPEAAVDGWLN----------------SPGHRKNLLNPAYTEIGVGVAYDA  192 (207)
T ss_pred             CCC--chHHHHHHhcC----------------ChhhhhhccCcchhheeEEEEecC
Confidence            531  22799999986                568999999999999999998643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	152
1cfe_A	135	P14a, Nmr, 20 Structures Length = 135		8e-19
1rc9_A	221	Crystal Structure Of Stecrisp, A Member Of Crisp Fa		7e-07
2dda_A	211	Crystal Structure Of Pseudechetoxin From Pseudechis		2e-06
2ddb_A	210	Crystal Structure Of Pseudecin From Pseudechis Porp		1e-05
1wvr_A	221	Crystal Structure Of A Crisp Family Ca-Channel Bloc		2e-05
1smb_A	154	Crystal Structure Of Golgi-Associated Pr-1 Protein		8e-05
4aiw_A	154	Gapr-1 With Bound Inositol Hexakisphosphate Length		2e-04
3nt8_A	424	Crystal Structure Of Na-Asp-1 Length = 424		5e-04
1u53_A	196	Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein F		8e-04

>pdb|1CFE|A Chain A, P14a, Nmr, 20 Structures Length = 135

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 15  REFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGS 74
           +++L  HN ARA VGV P+ W   L    +R   +  ++ G    NL     G N   G 
Sbjct: 5   QDYLAVHNDARAQVGVGPMSWDANL---ASRAQNYANSRAG--DCNLIHSGAGENLAKGG 59
Query: 75  GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT 134
           G   T R AV  WV+E+  YN+A N C    +C  Y QVVWR S+ LGC +A C      
Sbjct: 60  G-DFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWF 118
Query: 135 LTVCFYDPPGNIIGESP 151
           ++ C YDP GN IG+ P
Sbjct: 119 IS-CNYDPVGNWIGQRP 134

>pdb|1RC9|A Chain A, Crystal Structure Of Stecrisp, A Member Of Crisp Family From Trimeresurus Stejnegeri Refined At 1.6 Angstroms Resolution: Structual Relationship Of The Two Domains Length = 221

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Query: 7   APVLPAAAREFLEAHNLARAAVG-----VAPLKWSEKLGNGTNRVVRFQRNKMGCQFANL 61
           +P  P    E ++ HN  R +V      +  ++W  +  +   R             + +
Sbjct: 8   SPRKPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYESRV 67
Query: 62  TSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLEL 121
             G      ++ S   +     + AW +E   + +   +  PN   G Y Q+VW KS  +
Sbjct: 68  IEGIKCGENIYMSPYPMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRI 127
Query: 122 GCAQATCVKQQVT-LTVCFYDPPGNIIGES 150
           GCA A C     +   VC Y P GN IG++
Sbjct: 128 GCAAAYCPSSPYSYFFVCQYCPAGNFIGKT 157

>pdb|2DDA|A Chain A, Crystal Structure Of Pseudechetoxin From Pseudechis Australis Length = 211

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 20/151 (13%)
Query: 15  REFLEAHNLARAAV-----GVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGAN 69
           +E ++ HN  R +V      +  +KW+ +      R          C FA+    K    
Sbjct: 8   KEIVDKHNALRRSVKPTARNMLQMKWNSRAAQNAKRWAN------RCTFAHSPPNKRTVG 61
Query: 70  QL-WGSGMAVTPRM-----AVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGC 123
           +L  G  + ++ +       V AW +E   + +   +  P    G Y QVVW KS  +GC
Sbjct: 62  KLRCGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSYLIGC 121
Query: 124 AQATCVKQQVTLTVCFYDPPGNIIGE--SPY 152
           A A C   +  L VC Y P GNI G   +PY
Sbjct: 122 ASAKCSSSKY-LYVCQYCPAGNIRGSIATPY 151

>pdb|2DDB|A Chain A, Crystal Structure Of Pseudecin From Pseudechis Porphyriacus Length = 210

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 15  REFLEAHNLARAAV-----GVAPLKWSEKLGNGTNRVVRFQRNKMGCQFAN-----LTSG 64
           +E ++ HN  R +V      +  +KW+        R          C FA+      T G
Sbjct: 7   KEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWAD------RCTFAHSPPNTRTVG 60
Query: 65  KYGANQ-LWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGC 123
           K    + ++ S         V AW +E   + +   +  P    G Y QVVW KS  +GC
Sbjct: 61  KLRCGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGC 120
Query: 124 AQATCVKQQVTLTVCFYDPPGNIIGE--SPY 152
           A A C   +  L VC Y P GNI G   +PY
Sbjct: 121 ASAKCSSSKY-LYVCQYCPAGNIRGSIATPY 150

>pdb|1WVR|A Chain A, Crystal Structure Of A Crisp Family Ca-Channel Blocker Derived From Snake Venom Length = 221

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 14/157 (8%)
Query: 7   APVLPAAAREFLEAHNLARAAVG-----VAPLKWSEKLGNGTNRVVRFQRNKMGCQFANL 61
           +P  P    E ++ HN  R +V      +  ++W  +      R           + + +
Sbjct: 8   SPRKPEIQNEIIDLHNSLRRSVNPTASNMLKMEWYPEAAANAERWAYRCIESHSSRDSRV 67
Query: 62  TSGKYGANQLWGSGMAVTPRMAVD---AWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKS 118
             G      ++   MA  P    D   AW  E   + +   +   +   G Y Q+VW KS
Sbjct: 68  IGGIKCGENIY---MATYPAKWTDIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIVWYKS 124
Query: 119 LELGCAQATCVKQQVT-LTVCFYDPPGNIIGE--SPY 152
              GCA A C   + +   VC Y P GNIIG+  +PY
Sbjct: 125 YRAGCAAAYCPSSKYSYFYVCQYCPAGNIIGKTATPY 161

>pdb|1SMB|A Chain A, Crystal Structure Of Golgi-Associated Pr-1 Protein Length = 154

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 5/135 (3%)
Query: 16  EFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVR-FQRNKMGCQFANLTSGKYGANQLWGS 74
           E L+AHN  R   GV PLK  + L     +        ++       + G+ G N  W S
Sbjct: 12  EVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQXGENLAWAS 71
Query: 75  GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT 134
               T +   D W +E   YN            G +  +VW+ + ++G  +A+      +
Sbjct: 72  -YDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASA-SDGSS 127
Query: 135 LTVCFYDPPGNIIGE 149
             V  Y P GN++ E
Sbjct: 128 FVVARYFPAGNVVNE 142

>pdb|4AIW|A Chain A, Gapr-1 With Bound Inositol Hexakisphosphate Length = 154

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 5/135 (3%)
Query: 16  EFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVR-FQRNKMGCQFANLTSGKYGANQLWGS 74
           E L+AHN  R   GV PLK  + L     +        ++       + G+ G N  W S
Sbjct: 12  EVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS 71
Query: 75  GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVT 134
               T +   D W +E   YN            G +  +VW+ + ++G  +A+      +
Sbjct: 72  -YDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASA-SDGSS 127
Query: 135 LTVCFYDPPGNIIGE 149
             V  Y P GN++ E
Sbjct: 128 FVVARYFPAGNVVNE 142

>pdb|3NT8|A Chain A, Crystal Structure Of Na-Asp-1 Length = 424

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 103 PNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY 152
           PN + G Y Q+ W  + +LGCA   C     T  VC Y P GN +G   Y
Sbjct: 352 PNMQIGHYTQMAWDTTYKLGCAVVFC--NDFTFGVCQYGPGGNYMGHVIY 399

>pdb|1U53|A Chain A, Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein From The Nematode Parasite Necator Americanus And A Vaccine Antigen For Human Hookworm Infection Length = 196

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 108 GVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY 152
           G Y Q+VW+++++LGC    C    +   VC Y P GN++G+  Y
Sbjct: 133 GHYTQMVWQETVKLGCYVEAC--SNMCYVVCQYGPAGNMMGKDIY 175

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	4e-46
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	1e-41
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	1e-31
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	2e-31
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	7e-29
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	4e-27
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	1e-26
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	2e-25
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	2e-23
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	3e-22
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	2e-13
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	1e-09

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1 Length = 135

 Score =  145 bits (369), Expect = 4e-46
 Identities = 54/140 (38%), Positives = 66/140 (47%), Gaps = 9/140 (6%)

Query: 14  AREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFA-NLTSGKYGANQLW 72
            +++L  HN ARA VGV P+ W   L +        Q          NL     G N   
Sbjct: 4   PQDYLAVHNDARAQVGVGPMSWDANLASRA------QNYANSRAGDCNLIHSGAGENLAK 57

Query: 73  GSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQ 132
           G G   T R AV  WV+E+  YN+A N C    +C  Y QVVWR S+ LGC +A C    
Sbjct: 58  GGG-DFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARC-NNG 115

Query: 133 VTLTVCFYDPPGNIIGESPY 152
                C YDP GN IG+ PY
Sbjct: 116 WWFISCNYDPVGNWIGQRPY 135

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A* Length = 154

 Score =  135 bits (341), Expect = 1e-41
 Identities = 34/142 (23%), Positives = 54/142 (38%), Gaps = 9/142 (6%)

Query: 14  AREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFA---NLTSGKYGANQ 70
             E L+AHN  R   GV PLK  + L     +      +            + G+ G N 
Sbjct: 10  HNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALAST--RILKHSPESSRGQCGENL 67

Query: 71  LWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVK 130
            W S    T +   D W +E   YN            G +  +VW+ + ++G  +A+   
Sbjct: 68  AWASYD-QTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASA-S 123

Query: 131 QQVTLTVCFYDPPGNIIGESPY 152
              +  V  Y P GN++ E  +
Sbjct: 124 DGSSFVVARYFPAGNVVNEGFF 145

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A Length = 221

 Score =  111 bits (279), Expect = 1e-31
 Identities = 33/163 (20%), Positives = 55/163 (33%), Gaps = 22/163 (13%)

Query: 5   KPAPVLPAAAREFLEAHNLARAAVGVA-----PLKWSEKLGNGTNRVVRFQRNKMGCQFA 59
             +       +E ++ HN  R  V         ++W  +  +        +R    C   
Sbjct: 6   SESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNA------ERWANTCSLN 59

Query: 60  -------NLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQ 112
                   L   + G +    S    T    +  W +E   + +   +  P    G Y Q
Sbjct: 60  HSPDNLRVLEGIQCGESIYMSSNAR-TWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQ 118

Query: 113 VVWRKSLELGCAQATCVKQ-QVTLTVCFYDPPGNIIGE--SPY 152
           +VW ++   GCA + C         VC Y P GN  G+  +PY
Sbjct: 119 IVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY 161

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A Length = 210

 Score =  110 bits (277), Expect = 2e-31
 Identities = 43/153 (28%), Positives = 60/153 (39%), Gaps = 22/153 (14%)

Query: 14  AREFLEAHNLARAAV-----GVAPLKWSEKLGNGTNRVVRFQRNKMGCQFA-------NL 61
            +E ++ HN  R +V      +  +KW+             +R    C FA        +
Sbjct: 6   QKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNA------KRWADRCTFAHSPPNTRTV 59

Query: 62  TSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLEL 121
              + G N    S         V AW +E   + +   +  P    G Y QVVW KS  +
Sbjct: 60  GKLRCGENIFMSSQ-PFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLI 118

Query: 122 GCAQATCVKQQVTLTVCFYDPPGNIIGE--SPY 152
           GCA A C   +  L VC Y P GNI G   +PY
Sbjct: 119 GCASAKCSSSK-YLYVCQYCPAGNIRGSIATPY 150

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A Length = 205

 Score =  104 bits (260), Expect = 7e-29
 Identities = 36/156 (23%), Positives = 50/156 (32%), Gaps = 20/156 (12%)

Query: 14  AREFLEAHNLARAAVGVAP-----LKWSEKL-----GNGTNRVVRFQRNKMGCQFANLTS 63
            ++ +  HN  R+ V         + W   L        +N               +   
Sbjct: 19  IKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNF 78

Query: 64  GKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGC 123
              G N   GS    +   A+  W +E   Y+     C     CG Y QVVW  S ++GC
Sbjct: 79  TSLGENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRIC--KKVCGHYTQVVWADSYKVGC 136

Query: 124 AQATCVKQQV-------TLTVCFYDPPGNIIGESPY 152
           A   C K             +C Y P GN     PY
Sbjct: 137 AVQFCPKVSGFDALSNGAHFICNYGPGGN-YPTWPY 171

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1 Length = 209

 Score =   99 bits (249), Expect = 4e-27
 Identities = 35/176 (19%), Positives = 56/176 (31%), Gaps = 34/176 (19%)

Query: 5   KPAPVLPAAAREFLEAHNLARAAVGV-----------------APLKWSEKLGNGTNRVV 47
               +     ++ L+ HN  R  +                     L W+++L        
Sbjct: 37  VSYGLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVA---- 92

Query: 48  RFQRNKMGCQFA-----NLTSGKYGANQLWGSGMA---VTPRMAVDAWVNEKTFYNHADN 99
             Q     CQ+      ++   + G N       A     P   V  W +E   YN    
Sbjct: 93  --QVWANQCQYGHDTCRDVAKYQVGQNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKK 150

Query: 100 SCAPNHR-CGVYKQVVWRKSLELGCAQATCVKQQ--VTLTVCFYDPPGNIIGESPY 152
               +    G Y Q+VW  + E+GC     ++++      VC Y P GN   E  Y
Sbjct: 151 FSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus} Length = 196

 Score = 98.0 bits (244), Expect = 1e-26
 Identities = 36/170 (21%), Positives = 55/170 (32%), Gaps = 36/170 (21%)

Query: 11  PAAAREFLEAHNLARAAVGV-----------------APLKWSEKLGNGTNRVVRFQRNK 53
             A ++FLE HN  R++V +                   + +  ++            N 
Sbjct: 14  EEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTA------MNNA 67

Query: 54  MGCQFA---NLTSGKYGANQLWGSGMAVTP----RMAVDAWVNEKTFYNHADNSCAPNHR 106
             C F           G N    S   +        A  AW  E        N       
Sbjct: 68  KQCVFKHSQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGL 127

Query: 107 ----CGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY 152
                G Y Q+VW+++++LGC    C        VC Y P GN++G+  Y
Sbjct: 128 FSRGVGHYTQMVWQETVKLGCYVEACSNM--CYVVCQYGPAGNMMGKDIY 175

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta} Length = 218

 Score = 95.7 bits (238), Expect = 2e-25
 Identities = 39/185 (21%), Positives = 57/185 (30%), Gaps = 39/185 (21%)

Query: 1   SADGKPAPVLPAAAREFLEAHNLARAAVG-----------------VAPLKWSEKLGNGT 43
             +        A     +  HN  R  V                  +  L W  +L    
Sbjct: 30  CLEYSNVGFTDAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIA 89

Query: 44  NRVVRFQRNKMGCQFA-----NLTSGKYGANQLWGSGMA---VTPRMAVDAWVNEKTFYN 95
                 QR    C F      N+     G N    S       TP   +  W NE   ++
Sbjct: 90  ------QRWANQCTFEHDACRNVERFAVGQNIAATSSSGKNKSTPNEMILLWYNEVKDFD 143

Query: 96  HADNSCAP-----NHRCGVYKQVVWRKSLELGCAQATCVKQQV---TLTVCFYDPPGNII 147
           +   S  P       + G Y Q+VW K+ ++GC +    +         VC Y P GN++
Sbjct: 144 NRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVL 203

Query: 148 GESPY 152
           G   Y
Sbjct: 204 GAPIY 208

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 93.2 bits (231), Expect = 2e-23
 Identities = 25/159 (15%), Positives = 42/159 (26%), Gaps = 30/159 (18%)

Query: 16  EFLEAHNLARAAVGV----------------APLKWSEKLGNGTNRVVRFQRNKMGCQFA 59
            FL+ HN AR  V                    L W   +          Q     C   
Sbjct: 39  AFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQL------QDAIQSCPSG 92

Query: 60  NLTSGKYGANQLWGSGMAVTP------RMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQV 113
                    N +  S     P         +  W +         ++         +  +
Sbjct: 93  FAGIQGVAQNTMSWSSSGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNM 152

Query: 114 VWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY 152
           V+ ++ +LGCA   C  +      C Y+  G I  +  +
Sbjct: 153 VYSETTKLGCAYKVCGTK--LAVSCIYNGVGYITNQPMW 189

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 90.2 bits (223), Expect = 3e-22
 Identities = 36/169 (21%), Positives = 53/169 (31%), Gaps = 39/169 (23%)

Query: 15  REFLEAHNLARAAVGV-----------------APLKWSEKLGNGTNRVVRFQRNKMGCQ 57
             FL  HN  R++V                     + +  ++           R+   C 
Sbjct: 239 DTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASA------IRHGNKCV 292

Query: 58  FA---NLTSGKYGANQLWGSGMAVT----PRMAVDAWVNEKTFYNHADNSCA-------P 103
           +           G N    S +        + A   W NE   Y    ++         P
Sbjct: 293 YQHSHGEDRPGLGENIYKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRP 352

Query: 104 NHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY 152
           N + G Y Q+ W  + +LGCA   C     T  VC Y P GN +G   Y
Sbjct: 353 NMQIGHYTQMAWDTTYKLGCAVVFCNDF--TFGVCQYGPGGNYMGHVIY 399

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C* Length = 233

 Score = 64.0 bits (155), Expect = 2e-13
 Identities = 26/180 (14%), Positives = 38/180 (21%), Gaps = 35/180 (19%)

Query: 1   SADGKPAPVLPAAAREFLEAHNLARAAVGV-----------APLKWSEKLGNGTNRVVRF 49
               +   +L     E L   N  R  V               + W  +L          
Sbjct: 28  GQSPRTRELLKEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLA------ 81

Query: 50  QRNKMGCQFA-----NLTSGKYGANQLWGSGMAVTP------RMAVDAWVNEKTFYNHAD 98
           +R+  GC        N           +       P        AV     +K       
Sbjct: 82  KRHTKGCVGETHACRNTERFWLPGQLNFKYSGDKLPRIKELIDDAVKKGHLQKHNITREI 141

Query: 99  ----NSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQ--VTLTVCFYDPPGNIIGESPY 152
                   PN         +  +   +GC   T         L  C +    N  G   Y
Sbjct: 142 IENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFS-SQNTRGRPVY 200

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A Length = 206

 Score = 53.5 bits (128), Expect = 1e-09
 Identities = 21/161 (13%), Positives = 36/161 (22%), Gaps = 39/161 (24%)

Query: 8   PVLPAAAREFLEAHNLARA------------AVGVAPLKWSEKLGNGTNRVVRFQRNKMG 55
            V           HN  R             A  +  L +   L          ++    
Sbjct: 13  MVDRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEA------RKEIKL 66

Query: 56  CQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVW 115
             +A+      G  +  G           +         N               +QVV+
Sbjct: 67  PGYAD--LHHRGVTRFSGDYEGSAISALKEILETFSADKNS-------------MRQVVY 111

Query: 116 RKSLELGCAQATCVKQQV----TLTVCFYDPPGNIIGESPY 152
            K+   GC+      ++        VC YD          +
Sbjct: 112 PKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKPK--DGESF 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	100.0
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	100.0
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	100.0
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	100.0
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	100.0
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	100.0
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	100.0
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	100.0
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	100.0
4ifa_A	339	Extracellular protein containing A SCP domain; vac	99.71
4h0a_A	323	Uncharacterized protein; CAP protein family, cyste	99.56
3plv_C	21	66 kDa U4/U6.U5 small nuclear ribonucleoprotein C;	86.88

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*

Probab=100.00  E-value=4.7e-47  Score=261.65  Aligned_cols=136  Identities=25%  Similarity=0.446  Sum_probs=120.4

Q ss_pred             ChHHHHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCC----CCCCcceEEeccCCCCCHHHHHH
Q 037670           10 LPAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLT----SGKYGANQLWGSGMAVTPRMAVD   85 (152)
Q Consensus        10 ~~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~----~~~~Gen~~~~~~~~~~~~~~v~   85 (152)
                      .++|+++||++||.+|+.|++++|+||++|+..||+||++|+..  | ...|+    ...+||||+++. ...++.++|+
T Consensus         6 ~~~f~~~iL~~HN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~--~-~~~hs~~~~~~~~GeNl~~~~-~~~~~~~~v~   81 (154)
T 4aiw_A            6 SKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALAST--R-ILKHSPESSRGQCGENLAWAS-YDQTGKEVAD   81 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHH--T-CCCCCHHHHTTSSEEEEEEES-SCCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhhhc--c-cccccccCCCCCCCeeeEecC-CCCCHHHHHH
Confidence            36799999999999999999999999999999999999998865  4 23343    357899999865 3457899999


Q ss_pred             HHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEecCCCCCCCCCCC
Q 037670           86 AWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY  152 (152)
Q Consensus        86 ~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  152 (152)
                      .||+|..+|+|..+.+.  ..+||||||||++|++||||++.|.++. .++||+|+|+||+.|+.||
T Consensus        82 ~W~~E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCg~a~c~~~~-~~vVC~Y~P~GN~~g~~~y  145 (154)
T 4aiw_A           82 RWYSEIKNYNFQQPGFT--SGTGHFTAMVWKNTKKMGVGKASASDGS-SFVVARYFPAGNVVNEGFF  145 (154)
T ss_dssp             HHHGGGGGCCTTSCSCC--TTTHHHHHHHCTTCCEEEEEEEECTTSC-EEEEEEEESCCCCCSTTHH
T ss_pred             HHHHHhhhcccCCCCcC--CCcCCeeeeehhhhceeeeEEEEcCCCC-EEEEEEEeCCCccCCccch
Confidence            99999999999998886  4699999999999999999999999874 7999999999999999776

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1

Probab=100.00  E-value=2.2e-47  Score=258.07  Aligned_cols=133  Identities=38%  Similarity=0.738  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCCCCCcceEEeccCCCCCHHHHHHHHHhhhh
Q 037670           13 AAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKT   92 (152)
Q Consensus        13 ~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~~~~Gen~~~~~~~~~~~~~~v~~W~~e~~   92 (152)
                      ++++||+.||.+|+.++|++|+||++|+..||.||++|+.  .|. ..|+..  ||||+++. ...++.++|+.||+|..
T Consensus         3 ~~~~iL~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~a~--~c~-~~hs~~--GENla~~~-~~~~~~~~v~~W~~E~~   76 (135)
T 1cfe_A            3 SPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG--DCN-LIHSGA--GENLAKGG-GDFTGRAAVQLWVSERP   76 (135)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTT--TCC-SCSCSS--SBCCEECS-SSCCHHHHHHHHHTTGG
T ss_pred             HHHHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHHHhc--CCC-cccCCC--CeEEEEec-CCCCHHHHHHHHHhHHh
Confidence            5789999999999999999999999999999999998763  384 555544  99999876 45689999999999999


Q ss_pred             cCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEecCCCCCCCCCCC
Q 037670           93 FYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY  152 (152)
Q Consensus        93 ~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  152 (152)
                      .|+|..+.+..+..+||||||||++|++||||++.|.++ .+++||+|+|+||+.|++||
T Consensus        77 ~y~~~~~~~~~~~~~gHfTQ~vW~~t~~vGCa~~~c~~~-~~~~VC~Y~p~GN~~g~~pY  135 (135)
T 1cfe_A           77 SYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNG-WWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             GEEGGGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTS-SEEEEEECSSCCSCTTSCCC
T ss_pred             hCCCCCCCcCCCCcccceeeeEEccCcEEeEEEEEeCCC-CEEEEEEEeCCCCCCCCCCC
Confidence            999998887766789999999999999999999999876 58999999999999999999

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A

Probab=100.00  E-value=4.7e-43  Score=251.93  Aligned_cols=147  Identities=24%  Similarity=0.375  Sum_probs=125.2

Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhCC-----CCCCccCHHHHHHHHHHHHhhhhcCC-Cccc----cCCCCCCcceEEe
Q 037670            3 DGKPAPVLPAAAREFLEAHNLARAAVG-----VAPLKWSEKLGNGTNRVVRFQRNKMG-CQFA----NLTSGKYGANQLW   72 (152)
Q Consensus         3 ~~~p~~~~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~----~~~~~~~Gen~~~   72 (152)
                      +..|.+..++++++||+.||.+|+.|+     |.+|+||++||..||.||++|...++ |...    +.....+||||++
T Consensus         8 ~~~p~~~~~~f~~~~L~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~h~~~~~~~~~~~~~~~~~GeNl~~   87 (205)
T 3q2u_A            8 NILPDIENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNFTSLGENIWT   87 (205)
T ss_dssp             CCCCCTTCHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTTCBSSCCTTSSTTCCSSTTCSSCEEEEEE
T ss_pred             ccCCCCCCHHHHHHHHHHHHHHHHhcCCCcccCccCccCHHHHHHHHHHHHhCCCCCCccccccccccCCCCCCceEEEE
Confidence            467888889999999999999999994     78999999999999999999766654 3110    1123578999998


Q ss_pred             ccCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCC-------CcEEEEEEecCCCC
Q 037670           73 GSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQ-------QVTLTVCFYDPPGN  145 (152)
Q Consensus        73 ~~~~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~-------~~~~~vC~Y~p~gn  145 (152)
                      +......+.++|+.||+|...|+|..+.+.  ..+||||||||+.|++||||++.|...       ...++||+|+|+||
T Consensus        88 ~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~VC~Y~P~GN  165 (205)
T 3q2u_A           88 GSVPIFSVSSAITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGN  165 (205)
T ss_dssp             EETTTCCHHHHHHHHHGGGGGEETTTTEES--SCCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEEEEEEESCCC
T ss_pred             ccCCCCCHHHHHHHHHhHHHhcCCCCCCcc--chhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEEEEEEECCCC
Confidence            765567889999999999999999887665  679999999999999999999999852       35789999999999


Q ss_pred             CCCCCCC
Q 037670          146 IIGESPY  152 (152)
Q Consensus       146 ~~g~~~Y  152 (152)
                      + +++||
T Consensus       166 ~-~~~pY  171 (205)
T 3q2u_A          166 Y-PTWPY  171 (205)
T ss_dssp             C-SSCSS
T ss_pred             c-CCCCC
Confidence            8 88888

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=100.00  E-value=1.9e-42  Score=249.44  Aligned_cols=140  Identities=23%  Similarity=0.421  Sum_probs=114.5

Q ss_pred             hHHHHHHHHHHHHHHhhCC-----------------CCCCccCHHHHHHHHHHHHhhhhcCC-CccccCCCCCCcceEEe
Q 037670           11 PAAAREFLEAHNLARAAVG-----------------VAPLKWSEKLGNGTNRVVRFQRNKMG-CQFANLTSGKYGANQLW   72 (152)
Q Consensus        11 ~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~~~~~~~~Gen~~~   72 (152)
                      +++++.||+.||.+|+.|+                 |++|+||++||..||.||++|...++ |. . .....+||||++
T Consensus        43 ~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~~C~~~h~~~~-~-~~~~~~GeNl~~  120 (209)
T 1qnx_A           43 KQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTCR-D-VAKYQVGQNVAL  120 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHTTCCCSCCSCC-C-CSSSCCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccCCCCCCCccccccccccCHHHHHHHHHHHhcCcccCCCcc-C-CCCCCCccEEEE
Confidence            5789999999999999982                 88999999999999999999665544 31 1 111248999998


Q ss_pred             ccCC---CCCHHHHHHHHHhhhhcCCCCCCCCC-CCCCcchHHHHHHhhcceeeEEEEEeCCCC--cEEEEEEecCCCCC
Q 037670           73 GSGM---AVTPRMAVDAWVNEKTFYNHADNSCA-PNHRCGVYKQVVWRKSLELGCAQATCVKQQ--VTLTVCFYDPPGNI  146 (152)
Q Consensus        73 ~~~~---~~~~~~~v~~W~~e~~~y~~~~~~~~-~~~~~~hftq~vw~~t~~vGCa~~~c~~~~--~~~~vC~Y~p~gn~  146 (152)
                      ....   ...+.++|+.||+|...|++..+... ....+||||||||++|++||||++.|..+.  ..++||+|+|+||+
T Consensus       121 ~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~P~GN~  200 (209)
T 1qnx_A          121 TGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNF  200 (209)
T ss_dssp             EEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESCCCC
T ss_pred             ecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeEEEEEeCCCceeEEEEEEeCCCCCC
Confidence            6532   34688999999999999999854211 124689999999999999999999998653  36899999999999


Q ss_pred             CCCCCC
Q 037670          147 IGESPY  152 (152)
Q Consensus       147 ~g~~~Y  152 (152)
                      .|++||
T Consensus       201 ~g~~~Y  206 (209)
T 1qnx_A          201 KNEELY  206 (209)
T ss_dssp             TTSCSS
T ss_pred             CCCCCC
Confidence            999998

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A

Probab=100.00  E-value=1.1e-41  Score=247.12  Aligned_cols=145  Identities=23%  Similarity=0.386  Sum_probs=118.7

Q ss_pred             CCCChHHHHHHHHHHHHHHhhCC-----CCCCccCHHHHHHHHHHHHhhhhcCCCcc-ccCCCCCCcceEEeccCCCCCH
Q 037670            7 APVLPAAAREFLEAHNLARAAVG-----VAPLKWSEKLGNGTNRVVRFQRNKMGCQF-ANLTSGKYGANQLWGSGMAVTP   80 (152)
Q Consensus         7 ~~~~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~~~C~~-~~~~~~~~Gen~~~~~~~~~~~   80 (152)
                      .+..++++++||+.||.+|+.|+     |++|+||++||..||.||++|...++-.. .......+||||+++.. ...+
T Consensus         8 ~~~~~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~Hs~~~~r~~~~~~~GENl~~~~~-~~~~   86 (221)
T 1xta_A            8 STRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNLRVLEGIQCGESIYMSSN-ARTW   86 (221)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTTTCCSCCCGGGCEETTEECEEEEEEESS-CCCH
T ss_pred             cCCCHHHHHHHHHHHHHHHHhcCCccccCccCccCHHHHHHHHHHHhcCCCCCcCccccccCCCCCceEEEeecC-CCCH
Confidence            34557899999999999999995     77999999999999999999443332000 00001158999998763 2468


Q ss_pred             HHHHHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCC-CcEEEEEEecCCCCCCCC--CCC
Q 037670           81 RMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQ-QVTLTVCFYDPPGNIIGE--SPY  152 (152)
Q Consensus        81 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~-~~~~~vC~Y~p~gn~~g~--~~Y  152 (152)
                      .++|+.||+|...|+|..+.+..+..+||||||||++|++||||++.|..+ ..+++||+|+|+||+.|+  +||
T Consensus        87 ~~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~VC~Y~P~GN~~g~~~~pY  161 (221)
T 1xta_A           87 TEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY  161 (221)
T ss_dssp             HHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTTTTCSS
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCchhHHHHHHHHhcCEeeEEEEEcCCCCccEEEEEEEeCCcCCCCCcCCCc
Confidence            999999999999999988766556789999999999999999999999875 358999999999999999  898

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A

Probab=100.00  E-value=5.6e-42  Score=246.99  Aligned_cols=141  Identities=28%  Similarity=0.436  Sum_probs=115.8

Q ss_pred             ChHHHHHHHHHHHHHHhhCC-----CCCCccCHHHHHHHHHHHHhhhhcCCCcc-ccCCCCCCcceEEeccCCCCCHHHH
Q 037670           10 LPAAAREFLEAHNLARAAVG-----VAPLKWSEKLGNGTNRVVRFQRNKMGCQF-ANLTSGKYGANQLWGSGMAVTPRMA   83 (152)
Q Consensus        10 ~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~~~C~~-~~~~~~~~Gen~~~~~~~~~~~~~~   83 (152)
                      +++++++||+.||.+|+.|+     |.+|+||++||..||.||++|...++-.. .......+||||+++.. ..++.++
T Consensus         2 ~~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~Hs~~~~r~~~~~~~GENl~~~~~-~~~~~~a   80 (210)
T 2ddb_A            2 KKNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRTVGKLRCGENIFMSSQ-PFPWSGV   80 (210)
T ss_dssp             --CHHHHHHHHHHHHHTTCSSCBSSCBCCEECHHHHHHHHHHHTTTCCSCCCGGGSEETTEECEEEEEEESS-CCCHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCccccCcccccCHHHHHHHHHHHhcCCCCCCCccccccCCCCCcceEEEEcC-CCCHHHH
Confidence            35789999999999999994     77999999999999999999443332000 00001148999998763 3468999


Q ss_pred             HHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEecCCCCCCCC--CCC
Q 037670           84 VDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGE--SPY  152 (152)
Q Consensus        84 v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~--~~Y  152 (152)
                      |+.||+|..+|+|..+.+..+..+||||||||++|++||||++.|..+ .+++||+|+|+||+.|+  +||
T Consensus        81 v~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~-~~~~VC~Y~P~GN~~g~~~~pY  150 (210)
T 2ddb_A           81 VQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKCSSS-KYLYVCQYCPAGNIRGSIATPY  150 (210)
T ss_dssp             HHHHHGGGGGEETTTEESSTTSCCHHHHHHTCTTCCEEEEEEEEEETT-EEEEEEEEESCSSSTTCTTCSS
T ss_pred             HHHHHHHhhhCCCCCCCCCCCCcccchhhhhhhhccEeeEEEEEcCCC-CEEEEEEeeCCCCCCCCccCCC
Confidence            999999999999988766556789999999999999999999999877 58999999999999999  898

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}

Probab=100.00  E-value=1.3e-41  Score=242.83  Aligned_cols=137  Identities=24%  Similarity=0.430  Sum_probs=114.4

Q ss_pred             ChHHHHHHHHHHHHHHhhC-----------------CCCCCccCHHHHHHHHHHHHhhhhcCC-CccccCCCCCCcceEE
Q 037670           10 LPAAAREFLEAHNLARAAV-----------------GVAPLKWSEKLGNGTNRVVRFQRNKMG-CQFANLTSGKYGANQL   71 (152)
Q Consensus        10 ~~~~~~~il~~hN~~R~~~-----------------~m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~~~~~~~~Gen~~   71 (152)
                      .+++++.||+.||.+|+.|                 +|++|+||++||..||.||++|...++ |.    ....+||||+
T Consensus        13 t~~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~~L~Wd~~La~~Aq~~A~~C~~~h~~~~----~~~~~GeNl~   88 (196)
T 1u53_A           13 SEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQCVFKHSQPN----QRKGLGENIF   88 (196)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHTTCCCCCCCGG----GSTTCEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccchhcccCHHHHHHHHHHHHhCccCCCccc----cCCCCCeEEE
Confidence            3578999999999999998                 367999999999999999999544433 21    1236899999


Q ss_pred             eccCCCC----CHHHHHHHHHhhhhcCCCCC-CCCC---CCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEecCC
Q 037670           72 WGSGMAV----TPRMAVDAWVNEKTFYNHAD-NSCA---PNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPP  143 (152)
Q Consensus        72 ~~~~~~~----~~~~~v~~W~~e~~~y~~~~-~~~~---~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~  143 (152)
                      +..+...    .+.++|+.||+|...|++.. +.+.   ....+||||||||++|++||||++.|..  .+++||+|+|+
T Consensus        89 ~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~--~~~~VC~Y~p~  166 (196)
T 1u53_A           89 MSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSN--MCYVVCQYGPA  166 (196)
T ss_dssp             EESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSS--CEEEEEEEESC
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeEEEEeCC--CEEEEEEeCCC
Confidence            8764332    25789999999999999987 5443   3467999999999999999999999976  48999999999


Q ss_pred             CCCCCCCCC
Q 037670          144 GNIIGESPY  152 (152)
Q Consensus       144 gn~~g~~~Y  152 (152)
                      ||+.|++||
T Consensus       167 GN~~g~~~Y  175 (196)
T 1u53_A          167 GNMMGKDIY  175 (196)
T ss_dssp             CCCTTSBSS
T ss_pred             CCCCCCcCC
Confidence            999999998

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=100.00  E-value=1.3e-41  Score=246.54  Aligned_cols=141  Identities=24%  Similarity=0.407  Sum_probs=113.6

Q ss_pred             ChHHHHHHHHHHHHHHhhC-----------------CCCCCccCHHHHHHHHHHHHhhhhcCC-CccccCCCCCCcceEE
Q 037670           10 LPAAAREFLEAHNLARAAV-----------------GVAPLKWSEKLGNGTNRVVRFQRNKMG-CQFANLTSGKYGANQL   71 (152)
Q Consensus        10 ~~~~~~~il~~hN~~R~~~-----------------~m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~~~~~~~~Gen~~   71 (152)
                      .+++++.||+.||.+|+.|                 +|++|+||++||..||.||++|...++ |. . .....+||||+
T Consensus        39 t~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~~C~~~Hs~c~-~-~~~~~~GeNl~  116 (218)
T 2vzn_A           39 TDAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQCTFEHDACR-N-VERFAVGQNIA  116 (218)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCCCCEECHHHHHHHHHHHTTCCSSCCSCC-C-CSSSCCEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhchhccCCHHHHHHHHHHHHhCCcCCCCCC-C-CccCCCceEEE
Confidence            3578999999999999998                 288999999999999999999665544 41 1 11224899999


Q ss_pred             eccCC---CCCHHHHHHHHHhhhhcCCCCCC---CCC--CCCCcchHHHHHHhhcceeeEEEEEeCC-CC--cEEEEEEe
Q 037670           72 WGSGM---AVTPRMAVDAWVNEKTFYNHADN---SCA--PNHRCGVYKQVVWRKSLELGCAQATCVK-QQ--VTLTVCFY  140 (152)
Q Consensus        72 ~~~~~---~~~~~~~v~~W~~e~~~y~~~~~---~~~--~~~~~~hftq~vw~~t~~vGCa~~~c~~-~~--~~~~vC~Y  140 (152)
                      +....   .....++|+.||+|...|++...   ...  ....+||||||||++|++||||++.|.. +.  ..++||+|
T Consensus       117 ~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~vVC~Y  196 (218)
T 2vzn_A          117 ATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNY  196 (218)
T ss_dssp             EEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHHHHHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred             EEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCcccCCCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEEEEEEE
Confidence            86532   23567999999999999998742   111  1245899999999999999999999976 32  46899999


Q ss_pred             cCCCCCCCCCCC
Q 037670          141 DPPGNIIGESPY  152 (152)
Q Consensus       141 ~p~gn~~g~~~Y  152 (152)
                      +|+||+.|++||
T Consensus       197 ~P~GN~~g~~~y  208 (218)
T 2vzn_A          197 GPAGNVLGAPIY  208 (218)
T ss_dssp             ESCCCCTTSCSS
T ss_pred             CCCCCCCCCccc
Confidence            999999999998

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=100.00  E-value=2e-40  Score=242.46  Aligned_cols=140  Identities=18%  Similarity=0.139  Sum_probs=112.4

Q ss_pred             hHHHHHHHHHHHHHHhhC-----------CCCCCccCHHHHHHHHHHHHhhhhcCC-CccccCCCCCCcceEEeccCCC-
Q 037670           11 PAAAREFLEAHNLARAAV-----------GVAPLKWSEKLGNGTNRVVRFQRNKMG-CQFANLTSGKYGANQLWGSGMA-   77 (152)
Q Consensus        11 ~~~~~~il~~hN~~R~~~-----------~m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~~~~~~~~Gen~~~~~~~~-   77 (152)
                      +++++.||+.||.+|+.|           +|++|+||++||..||.||++|...++ | ........+|||++...+.. 
T Consensus        38 ~~~~~~il~~HN~~R~~va~G~~~~P~A~nM~~L~Wd~~La~~Aq~~a~~C~~~h~~c-~~~~~~~~~Gen~~~~~~~~~  116 (233)
T 3u3l_C           38 KEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTKGCVGETHAC-RNTERFWLPGQLNFKYSGDKL  116 (233)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTCCCBSSCBCCEECHHHHHHHHHHHTTCCSCCCCB-CCCSSCSSCEEEEEEEEESSC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCCccccCCccEECHHHHHHHHHHHHhCCCCCCcc-cccCcCCcCeEEEEEecCCCC
Confidence            679999999999999999           699999999999999999999665544 4 11222236899887654322 


Q ss_pred             C----CHHHHHHHHHhhhhcCCCCC----CCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCC--cEEEEEEecCCCCCC
Q 037670           78 V----TPRMAVDAWVNEKTFYNHAD----NSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQ--VTLTVCFYDPPGNII  147 (152)
Q Consensus        78 ~----~~~~~v~~W~~e~~~y~~~~----~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~--~~~~vC~Y~p~gn~~  147 (152)
                      .    .+.++|+.||+|...|++..    +....+..+||||||||++|++||||++.|..+.  .+++||+|+| ||+.
T Consensus       117 ~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~p-GN~~  195 (233)
T 3u3l_C          117 PRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFSS-QNTR  195 (233)
T ss_dssp             CCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEESC-CCCT
T ss_pred             CCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCcccccchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEEEEECCC-CCCC
Confidence            2    25789999999999998652    1222346799999999999999999999998652  4799999998 9999


Q ss_pred             CCCCC
Q 037670          148 GESPY  152 (152)
Q Consensus       148 g~~~Y  152 (152)
                      |++||
T Consensus       196 g~~~Y  200 (233)
T 3u3l_C          196 GRPVY  200 (233)
T ss_dssp             TSCSS
T ss_pred             CCcee
Confidence            99998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=4.4e-37  Score=241.73  Aligned_cols=138  Identities=25%  Similarity=0.400  Sum_probs=113.2

Q ss_pred             ChHHHHHHHHHHHHHHhhCC-----------------CCCCccCHHHHHHHHHHHHhhhhcCCCccccCCCCCCcceEEe
Q 037670           10 LPAAAREFLEAHNLARAAVG-----------------VAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLW   72 (152)
Q Consensus        10 ~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~~~~Gen~~~   72 (152)
                      .+++++.||+.||.+|+.|+                 |.+|+||++||..||.||++|...++-   ......+||||++
T Consensus       234 ~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a~~C~~~h~~---~~~~~~~GeNl~~  310 (424)
T 3nt8_A          234 TDSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGNKCVYQHSH---GEDRPGLGENIYK  310 (424)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHTTCCSSCCC---TTTSTTCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHHHhCcccCCC---ccccCccceeEEe
Confidence            47899999999999999984                 458999999999999999993332220   0112368999998


Q ss_pred             ccCCCC----CHHHHHHHHHhhhhcCCCCCCC-C------CCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEec
Q 037670           73 GSGMAV----TPRMAVDAWVNEKTFYNHADNS-C------APNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYD  141 (152)
Q Consensus        73 ~~~~~~----~~~~~v~~W~~e~~~y~~~~~~-~------~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~  141 (152)
                      ......    .+.++|+.||+|...|++.... +      ..+..+||||||||++|++||||++.|..+  .++||+|+
T Consensus       311 ~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~--~~~VC~Y~  388 (424)
T 3nt8_A          311 TSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDF--TFGVCQYG  388 (424)
T ss_dssp             ESSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEEEEECSSS--EEEEEEEE
T ss_pred             cccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCCCCcccchHHHhhhhcceeeeEEEEeCCC--eEEEEEec
Confidence            754332    4789999999999999986433 2      134689999999999999999999999876  69999999


Q ss_pred             CCCCCCCCCCC
Q 037670          142 PPGNIIGESPY  152 (152)
Q Consensus       142 p~gn~~g~~~Y  152 (152)
                      |+||+.|++||
T Consensus       389 p~GN~~g~~~Y  399 (424)
T 3nt8_A          389 PGGNYMGHVIY  399 (424)
T ss_dssp             SCCCCTTSBSS
T ss_pred             CCCCcCCCCCC
Confidence            99999999998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=4.2e-37  Score=241.89  Aligned_cols=135  Identities=18%  Similarity=0.289  Sum_probs=114.5

Q ss_pred             ChHHHHHHHHHHHHHHhhC----------------CCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCCCCCcceEEec
Q 037670           10 LPAAAREFLEAHNLARAAV----------------GVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWG   73 (152)
Q Consensus        10 ~~~~~~~il~~hN~~R~~~----------------~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~~~~Gen~~~~   73 (152)
                      .+++++.||+.||.+|+.+                +|.+|+||++||..||.||++      |...+.....+||||++.
T Consensus        33 ~~~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~~L~Wd~eLa~~Aq~~a~~------C~~~h~~~~~~GeNl~~~  106 (424)
T 3nt8_A           33 TDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAIQS------CPSGFAGIQGVAQNTMSW  106 (424)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCBCCEECHHHHHHHHHHCTT------CCSSCCCCTTCEEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCCccccCHHHHHHHHHHHhh------CCCcCCCCCCceeeEEec
Confidence            3679999999999999999                388999999999999999999      744433446799999875


Q ss_pred             cCC------CCCHHHHHHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEecCCCCCC
Q 037670           74 SGM------AVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNII  147 (152)
Q Consensus        74 ~~~------~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~  147 (152)
                      ...      ...+.++|+.||+|...|++..........++|||||||+++++||||++.|..  .+++||+|+|+||+.
T Consensus       107 ~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~ghfTqmvw~~t~~vGCa~~~c~~--~~~~VC~Y~p~GN~~  184 (424)
T 3nt8_A          107 SSSGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGT--KLAVSCIYNGVGYIT  184 (424)
T ss_dssp             ECTTCCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCCCTTCHHHHHHHCTTCCEEEEEEEEETT--EEEEEEEESSCCCST
T ss_pred             cccCCcCCHHHHHHHHHHHHHHHHHHcCCcccccCCCcchHHHHHHHHHhcCeeceEEEEeCC--cEEEEEEECCCCCcc
Confidence            411      123688999999999999998543333457899999999999999999999986  589999999999999


Q ss_pred             CCCCC
Q 037670          148 GESPY  152 (152)
Q Consensus       148 g~~~Y  152 (152)
                      |++||
T Consensus       185 g~~~Y  189 (424)
T 3nt8_A          185 NQPMW  189 (424)
T ss_dssp             TCBSS
T ss_pred             ccccc
Confidence            99998

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A

Probab=100.00  E-value=1.8e-34  Score=206.00  Aligned_cols=117  Identities=16%  Similarity=0.117  Sum_probs=94.5

Q ss_pred             CChHHHHHHHHHHHHHHhhC------------CCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCCCCCcceEEeccCC
Q 037670            9 VLPAAAREFLEAHNLARAAV------------GVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGM   76 (152)
Q Consensus         9 ~~~~~~~~il~~hN~~R~~~------------~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~~~~Gen~~~~~~~   76 (152)
                      -.+++++.||+.||.+|+.+            +|.+|+||++||..||.||+ |. ..    ..    ..||||+..++.
T Consensus        14 lt~~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~~l~Wd~eLa~~Aq~~A~-C~-~~----~~----~~GeNl~~~sg~   83 (206)
T 3s6s_A           14 VDRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIK-LP-GY----AD----LHHRGVTRFSGD   83 (206)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCBCCEEEHHHHHHHHHHHH-ST-TH----HH----HTTCEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHhCCCCCCCcchhhcCcCCchHHHHHHHHHhhc-CC-CC----CC----CCCcEEEEecCC
Confidence            34789999999999999987            47789999999999999998 76 21    11    119999653322


Q ss_pred             --CCCH--HHHHHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeC----CCCcEEEEEEecCCCCCCC
Q 037670           77 --AVTP--RMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCV----KQQVTLTVCFYDPPGNIIG  148 (152)
Q Consensus        77 --~~~~--~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~----~~~~~~~vC~Y~p~gn~~g  148 (152)
                        ....  .++|+.||+|               .++|||||||++|++||||++.|.    .+..+++||+|+|+|  .|
T Consensus        84 ~~~~~~~~~~av~~W~~E---------------~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~vVCnY~p~G--~g  146 (206)
T 3s6s_A           84 YEGSAISALKEILETFSA---------------DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKP--KD  146 (206)
T ss_dssp             CSSCHHHHHHHHHHHHTT---------------CHHHHHHHHCTTCCEEEEEEEECC-------EEEEEEEESCCC--CT
T ss_pred             CCccchhHHHHHHHHHhh---------------hhhhHHHHHHHhhceeeEEEEEecCcCCCCceEEEEEEeCCCC--CC
Confidence              2223  3899999998               489999999999999999999996    222579999999998  89


Q ss_pred             CCCC
Q 037670          149 ESPY  152 (152)
Q Consensus       149 ~~~Y  152 (152)
                      ++||
T Consensus       147 ~~~Y  150 (206)
T 3s6s_A          147 GESF  150 (206)
T ss_dssp             TCCC
T ss_pred             CCCc
Confidence            9998

>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}

Probab=99.71  E-value=2.7e-17  Score=125.24  Aligned_cols=93  Identities=15%  Similarity=0.182  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCC-----------------CCCcceEEecc
Q 037670           12 AAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTS-----------------GKYGANQLWGS   74 (152)
Q Consensus        12 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~-----------------~~~Gen~~~~~   74 (152)
                      .+.+++|++||.+|+.+|++||+||..|++.|+.||+.|+..+.   ..|.+                 ..+||||+++.
T Consensus       219 a~e~~vl~lvN~~Ra~~Gl~pL~~d~~L~~aAq~hA~dMa~~~~---fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~  295 (339)
T 4ifa_A          219 GNMQQIFDLTNIIRSRHNLPLLAWDQQTADVAIGHSKDMKDNNY---FSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQH  295 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTC---CSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESC
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHhhcCC---eecCCCCCCCHHHHHHHcCCCcCceeEEEEEeC
Confidence            46789999999999999999999999999999999999987642   22321                 13699999876


Q ss_pred             CCCCCHHHHHHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEE
Q 037670           75 GMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQA  126 (152)
Q Consensus        75 ~~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~  126 (152)
                         .++..+|+.|++                +.||+++|+|...++||||++
T Consensus       296 ---~s~~~av~~Wmn----------------SpGHr~NIL~~~~t~iGvGv~  328 (339)
T 4ifa_A          296 ---SDGVAALQGWLN----------------SEGHRKNLLNEQFTGLGVGVY  328 (339)
T ss_dssp             ---SSHHHHHHHHHT----------------SHHHHHHHTCTTCCEEEEEEE
T ss_pred             ---CCHHHHHHHHhC----------------CHhHHHHHhCCCCCEEEEEEE
Confidence               478899999996                678999999999999999987

>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}

Probab=99.56  E-value=1.3e-14  Score=110.12  Aligned_cols=93  Identities=15%  Similarity=0.100  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCC----------------CCCcceEEeccC
Q 037670           12 AAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTS----------------GKYGANQLWGSG   75 (152)
Q Consensus        12 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~----------------~~~Gen~~~~~~   75 (152)
                      ...++||++.|.+|..+|++||.||..|+..|+.+|..|+..+   +.++..                ..+||||+++. 
T Consensus       204 ~~e~~il~liN~~R~~~GL~pL~~d~~L~~aA~~ha~dma~~~---~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~-  279 (323)
T 4h0a_A          204 NQLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNG---SDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAF-  279 (323)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHTC---------CCCHHHHHHHHHHTTCCCSEEEEEEEESC-
T ss_pred             HHHHHHHHHHHHHHHHcCCcccCccHhHHHHHHHHHHHHhhCC---CCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCC-
Confidence            4667899999999999999999999999999999999997543   223321                23589999876 


Q ss_pred             CCCCHHHHHHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEE
Q 037670           76 MAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQA  126 (152)
Q Consensus        76 ~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~  126 (152)
                        .++..+|+.|++                +.||..+|+....++||+|+.
T Consensus       280 --~~~~~vv~~Wmn----------------SpgHR~NiL~~~~t~iGvGv~  312 (323)
T 4h0a_A          280 --NDVPTLIHSWMN----------------SDIHRSRLLNSKYDEMGGDVM  312 (323)
T ss_dssp             --CSHHHHHHHHHT----------------SHHHHHHHTCSSCCEEEEEEE
T ss_pred             --CCHHHHHHHHHc----------------CHHHHHHHcCCCCCEEEEEEE
Confidence              478999999996                568999999999999999986

>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}

Probab=86.88  E-value=0.65  Score=20.24  Aligned_cols=17  Identities=29%  Similarity=0.468  Sum_probs=14.5

Q ss_pred             HHHHHHHHhhCCCCCCc
Q 037670           18 LEAHNLARAAVGVAPLK   34 (152)
Q Consensus        18 l~~hN~~R~~~~m~~L~   34 (152)
                      ++..|++|.+.||.++.
T Consensus         4 iEEtnk~r~~lGLkplp   20 (21)
T 3plv_C            4 IEETNELRASLGLKLIP   20 (26)
T ss_dssp             HHHHHHHHHHTTCCCCC
T ss_pred             HHHHHHHHHHcCCCCCC
Confidence            56789999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	152
d1cfea_	135	d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1	5e-28
d1rc9a1	164	d.111.1.1 (A:1-164) Cysteine-rich secretory protei	1e-26
d1smba_	149	d.111.1.1 (A:) Golgi-associated PR-1 protein {Huma	4e-25
d1qnxa_	209	d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jac	4e-21

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]} Length = 135

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

 Score = 98.8 bits (245), Expect = 5e-28
 Identities = 50/139 (35%), Positives = 62/139 (44%), Gaps = 7/139 (5%)

Query: 14  AREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWG 73
            +++L  HN ARA VGV P+ W   L +        Q                    L  
Sbjct: 4   PQDYLAVHNDARAQVGVGPMSWDANLASRA------QNYANSRAGDCNLIHSGAGENLAK 57

Query: 74  SGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQV 133
            G   T R AV  WV+E+  YN+A N C    +C  Y QVVWR S+ LGC +A C     
Sbjct: 58  GGGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARC-NNGW 116

Query: 134 TLTVCFYDPPGNIIGESPY 152
               C YDP GN IG+ PY
Sbjct: 117 WFISCNYDPVGNWIGQRPY 135

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]} Length = 164

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

 Score = 96.1 bits (238), Expect = 1e-26
 Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 8/155 (5%)

Query: 6   PAPVLPAAAREFLEAHNLARAAVGVAP-----LKWSEKLGNGTNRVVRFQRNKMGCQFAN 60
            +P  P    E ++ HN  R +V         ++W  +  +   R             + 
Sbjct: 7   ESPRKPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYESR 66

Query: 61  LTSGKYGANQLWGSGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLE 120
           +  G      ++ S   +     + AW +E   + +   +  PN   G Y Q+VW KS  
Sbjct: 67  VIEGIKCGENIYMSPYPMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYR 126

Query: 121 LGCAQATCVKQQV-TLTVCFYDPPGNIIGES--PY 152
           +GCA A C         VC Y P GN IG++  PY
Sbjct: 127 IGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPY 161

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.9 bits (227), Expect = 4e-25
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 3/139 (2%)

Query: 14  AREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWG 73
             E L+AHN  R   GV PLK  + L     +      +    + +  +S       L  
Sbjct: 7   HNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAW 66

Query: 74  SGMAVTPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQV 133
           +    T +   D W +E   YN            G +  +VW+ + ++G  +A+      
Sbjct: 67  ASYDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGS- 123

Query: 134 TLTVCFYDPPGNIIGESPY 152
           +  V  Y P GN++ E  +
Sbjct: 124 SFVVARYFPAGNVVNEGFF 142

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]} Length = 209

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

 Score = 83.0 bits (204), Expect = 4e-21
 Identities = 32/171 (18%), Positives = 54/171 (31%), Gaps = 24/171 (14%)

Query: 5   KPAPVLPAAAREFLEAHNLARAAVG-----------------VAPLKWSEKLGNGTNRVV 47
               +     ++ L+ HN  R  +                  +  L W+++L        
Sbjct: 37  VSYGLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWA 96

Query: 48  RFQRNKMGCQFANLTSGKYGANQLWGSGMA---VTPRMAVDAWVNEKTFYNHADNSCAPN 104
              +        ++   + G N       A     P   V  W +E   YN        +
Sbjct: 97  NQCQYGHDT-CRDVAKYQVGQNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGND 155

Query: 105 HR-CGVYKQVVWRKSLELGCAQATCVKQQ--VTLTVCFYDPPGNIIGESPY 152
               G Y Q+VW  + E+GC     ++++      VC Y P GN   E  Y
Sbjct: 156 FLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	152
d1cfea_	135	Pathogenesis-related protein 1 (PR1) {Tomato (Lyco	100.0
d1smba_	149	Golgi-associated PR-1 protein {Human (Homo sapiens	100.0
d1rc9a1	164	Cysteine-rich secretory protein (SteCRISP) {Chines	100.0
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	100.0

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

Probab=100.00  E-value=1.1e-47  Score=258.00  Aligned_cols=133  Identities=38%  Similarity=0.703  Sum_probs=118.3

Q ss_pred             HHHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCCCCCCcceEEeccCCCCCHHHHHHHHHhhhh
Q 037670           13 AAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLTSGKYGANQLWGSGMAVTPRMAVDAWVNEKT   92 (152)
Q Consensus        13 ~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~~~~~Gen~~~~~~~~~~~~~~v~~W~~e~~   92 (152)
                      .+++||+.||.+|+.++|+||+||++|+..||.||++|+..++   .  ....+||||+++. ...++.++|+.||+|..
T Consensus         3 ~~q~~l~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~~~~~~---~--~~~~~GeNi~~~~-~~~~~~~av~~W~~E~~   76 (135)
T d1cfea_           3 SPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCN---L--IHSGAGENLAKGG-GDFTGRAAVQLWVSERP   76 (135)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCC---S--CSCSSSBCCEECS-SSCCHHHHHHHHHTTGG
T ss_pred             cHHHHHHHHHHHHHHcCCCcCEECHHHHHHHHHHHHHHhhCCC---c--ccCccccceeccC-CCCCHHHHHHHHHhhcc
Confidence            5688999999999999999999999999999999999875532   2  2246899999765 35678999999999999


Q ss_pred             cCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEecCCCCCCCCCCC
Q 037670           93 FYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY  152 (152)
Q Consensus        93 ~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  152 (152)
                      .|+|..+.+.....++|||||||++|++||||++.|.++. ++|||+|+|+||+.|++||
T Consensus        77 ~y~~~~~~~~~~~~~ghftQmvW~~t~~vGCa~~~c~~~~-~~vVC~Y~P~GN~~g~~pY  135 (135)
T d1cfea_          77 SYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGW-WFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             GEEGGGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTSS-EEEEEECSSCCSCTTSCCC
T ss_pred             ccccccccCCCCcccchhheeeehhheEeeEEEEEECCCC-EEEEEEEeCCCCcCCcCCC
Confidence            9999988777667899999999999999999999998874 7899999999999999999

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-43  Score=238.88  Aligned_cols=135  Identities=25%  Similarity=0.433  Sum_probs=119.4

Q ss_pred             hHHHHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHhhhhcCCCccccCC----CCCCcceEEeccCCCCCHHHHHHH
Q 037670           11 PAAAREFLEAHNLARAAVGVAPLKWSEKLGNGTNRVVRFQRNKMGCQFANLT----SGKYGANQLWGSGMAVTPRMAVDA   86 (152)
Q Consensus        11 ~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~~~~----~~~~Gen~~~~~~~~~~~~~~v~~   86 (152)
                      .+|+++||++||.+|+++++++|+||++|++.|+.||++|+....   ..|+    ...+|||++++.. ...+.++|+.
T Consensus         4 ~~f~~~il~~HN~~R~~~g~~pL~wd~~La~~A~~~A~~~a~~~~---~~h~~~~~~~~~geni~~~~~-~~~~~~~v~~   79 (149)
T d1smba_           4 KQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRI---LKHSPESSRGQCGENLAWASY-DQTGKEVADR   79 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHCC---CCCCHHHHTTSSEEEEEEESS-CCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHhhccccc---ccccccccccccCceeeecCC-CccHHHHHHH
Confidence            579999999999999999999999999999999999999987643   2232    3568999997663 3578899999


Q ss_pred             HHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCCcEEEEEEecCCCCCCCCCCC
Q 037670           87 WVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQVTLTVCFYDPPGNIIGESPY  152 (152)
Q Consensus        87 W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  152 (152)
                      |++|..+|+|..+.+.  ..+||||||||+++++||||++.|.++. +++||+|+|+||+.|+.||
T Consensus        80 W~~e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCg~a~c~~~~-~~~VC~Y~p~GN~~~~~~y  142 (149)
T d1smba_          80 WYSEIKNYNFQQPGFT--SGTGHFTAMVWKNTKKMGVGKASASDGS-SFVVARYFPAGNVVNEGFF  142 (149)
T ss_dssp             HHGGGGGCCTTSCCCC--GGGHHHHHHHCTTCCEEEEEEEECTTSC-EEEEEEEESCCCCCSTTHH
T ss_pred             HHHHHhhcccCCCCcc--cccchhhheecCCceEeeEEEEEcCCCC-EEEEEEeeCCCCcCCcccc
Confidence            9999999999988876  5799999999999999999999998864 7899999999999999887

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

Probab=100.00  E-value=1.2e-42  Score=240.32  Aligned_cols=147  Identities=27%  Similarity=0.462  Sum_probs=123.4

Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhCC-----CCCCccCHHHHHHHHHHHHhhhhcCCCccc-cCCCCCCcceEEeccCCCC
Q 037670            5 KPAPVLPAAAREFLEAHNLARAAVG-----VAPLKWSEKLGNGTNRVVRFQRNKMGCQFA-NLTSGKYGANQLWGSGMAV   78 (152)
Q Consensus         5 ~p~~~~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~~~C~~~-~~~~~~~Gen~~~~~~~~~   78 (152)
                      .+++..++++++||+.||.+|++|+     |.+|+||.+|+..|+.||++|...+++... ......+|||++... ...
T Consensus         6 ~~~~~~~~~~~~il~~HN~~R~~~~~~a~~m~~L~Wd~~La~~A~~~a~~c~~~~~~~~~~~~~~~~~g~n~~~~~-~~~   84 (164)
T d1rc9a1           6 SESPRKPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYESRVIEGIKCGENIYMSP-YPM   84 (164)
T ss_dssp             GGCTTSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTTTCCSCCCGGGGEETTEECEEEEEEES-SCC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHcCCCcccccccccCHHHHHHHHHHHHHHhhccCCcccccccccccceEEEEec-CCC
Confidence            4566778999999999999999995     666999999999999999998766553111 123356899998655 335


Q ss_pred             CHHHHHHHHHhhhhcCCCCCCCCCCCCCcchHHHHHHhhcceeeEEEEEeCCCC-cEEEEEEecCCCCCCCC--CCC
Q 037670           79 TPRMAVDAWVNEKTFYNHADNSCAPNHRCGVYKQVVWRKSLELGCAQATCVKQQ-VTLTVCFYDPPGNIIGE--SPY  152 (152)
Q Consensus        79 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~-~~~~vC~Y~p~gn~~g~--~~Y  152 (152)
                      .+.++|+.||+|..+|++..+.+..+..++|||||||+++++||||++.|.++. ..+|||+|+|+||+.|+  .||
T Consensus        85 ~~~~~v~~W~~E~~~~~~~~~~~~~~~~~ghftqmvW~~t~~vGCa~~~c~~~~~~~~vVC~Y~P~GN~~g~~~~~Y  161 (164)
T d1rc9a1          85 KWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPY  161 (164)
T ss_dssp             CHHHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTCTTCSS
T ss_pred             CHHHHHHHHhhhhheeecCCCCCCCcchhhHHHHHhhhcccEEeEEEEEeCCCCceEEEEEEEcCCCccCCCcCCCc
Confidence            789999999999999999887776667899999999999999999999998764 47899999999999997  567

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=100.00  E-value=3e-40  Score=236.11  Aligned_cols=141  Identities=23%  Similarity=0.419  Sum_probs=117.2

Q ss_pred             ChHHHHHHHHHHHHHHhhC-----------------CCCCCccCHHHHHHHHHHHHhhhhcCC-CccccCCCCCCcceEE
Q 037670           10 LPAAAREFLEAHNLARAAV-----------------GVAPLKWSEKLGNGTNRVVRFQRNKMG-CQFANLTSGKYGANQL   71 (152)
Q Consensus        10 ~~~~~~~il~~hN~~R~~~-----------------~m~~L~Wd~~La~~A~~~a~~~~~~~~-C~~~~~~~~~~Gen~~   71 (152)
                      .+++|+.||+.||.+|+++                 +|.+|+||++||..||.||++|...++ |.  ......+|||++
T Consensus        42 t~~~r~~iL~~HN~~R~~vA~G~~~~~~~~~~P~A~~M~~L~Wd~eLa~~A~~~a~~C~~~~~~~~--~~~~~~~Gen~~  119 (209)
T d1qnxa_          42 TKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTCR--DVAKYQVGQNVA  119 (209)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHTTCCCSCCSCC--CCSSSCCEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHhcccccccccCCCCccccCccceECHHHHHHHHHHHhhcccCCCccc--CCCCCCCcceee
Confidence            3689999999999999985                 388899999999999999999877665 41  223345799998


Q ss_pred             ecc---CCCCCHHHHHHHHHhhhhcCCCCCCCCC-CCCCcchHHHHHHhhcceeeEEEEEeCCCC--cEEEEEEecCCCC
Q 037670           72 WGS---GMAVTPRMAVDAWVNEKTFYNHADNSCA-PNHRCGVYKQVVWRKSLELGCAQATCVKQQ--VTLTVCFYDPPGN  145 (152)
Q Consensus        72 ~~~---~~~~~~~~~v~~W~~e~~~y~~~~~~~~-~~~~~~hftq~vw~~t~~vGCa~~~c~~~~--~~~~vC~Y~p~gn  145 (152)
                      +..   .....+.++|+.|++|...|++..+.+. ....+||||||||+++++||||++.|..+.  .++|||+|+|+||
T Consensus       120 ~~~~~~~~~~~~~~~v~~W~~E~~~~~~~~~~~~~~~~~~ghftQmvw~~t~~VGCa~~~c~~~~~~~~~vVC~Y~p~GN  199 (209)
T d1qnxa_         120 LTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGN  199 (209)
T ss_dssp             EEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESCCC
T ss_pred             ecccCCcCcccHHHHHHHHHHHhhhcCCCcccccCCccccchhHHHhhhhhCEEeEEEEEEcCCCCCEEEEEEEECCCCC
Confidence            743   2335788999999999999998776543 234699999999999999999999997653  4689999999999


Q ss_pred             CCCCCCC
Q 037670          146 IIGESPY  152 (152)
Q Consensus       146 ~~g~~~Y  152 (152)
                      +.|++||
T Consensus       200 ~~g~~~Y  206 (209)
T d1qnxa_         200 FKNEELY  206 (209)
T ss_dssp             CTTSCSS
T ss_pred             CCCCCCC
Confidence            9999999