Citrus Sinensis ID: 037672

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80----
Protein Sequence
LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDIYNNQSSIEGLSALEKLKLERRGG
Secondary Structure (PSIPRED)
cccccccccEEEEEEEcccccEEEEEEEccccccccEEEccccccccccccccccccHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEEEEEcccccEEEEEEEEcccccccccccHHHHccccccccHcEccHHHHHHHccccccccccccEEEccccc
Coil and Loop (DISEMBL)
litndkfkSAYHRVLSKKEGSRISIESFFMnnscsrqygpikellseenpplypeitlkdiynnqssieGLSALEKLKLERRGG
Flexible Loop (DISEMBL)
litndkfksayhrvlskkegsrisIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDIYNNqssieglsaleklklerrgg
Low Complexity Region (SEG)
LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDIYNNQSSIEGLSALEKLKLERRGG
Disordered region (IsUnstruct)
***********************SIESFFMNNSCSRQYGPIKEL*******LYPEITLKDIYN*********************
Disordered Region (DISOPRED)
LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDIYNNQSSIEGLSALEK*KLE****
Disordered Region (DISEMBL)
LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDIYNNQSSIEGLSALEKLKLERRGG
Disordered Region (DISPRO)
**TNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDIYNNQSSIEGLSALEKLKLE****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDIYNNQSSIEGLSALEKLKLERRGG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	84	2.2.26 [Sep-21-2011]
Q9LTH7	366	1-aminocyclopropane-1-car	yes	no	0.928	0.213	0.488	2e-13
O04847	401	Deacetoxyvindoline 4-hydr	N/A	no	0.714	0.149	0.575	3e-13
Q8H1S4	369	1-aminocyclopropane-1-car	no	no	0.940	0.214	0.488	1e-12
P10967	363	1-aminocyclopropane-1-car	N/A	no	0.940	0.217	0.457	7e-12
Q9C5K7	369	1-aminocyclopropane-1-car	no	no	0.940	0.214	0.488	7e-12
P93821	345	1-aminocyclopropane-1-car	no	no	0.690	0.168	0.6	2e-11
Q84MB3	365	1-aminocyclopropane-1-car	no	no	0.916	0.210	0.482	2e-11
Q9LTH8	364	1-aminocyclopropane-1-car	no	no	0.940	0.217	0.457	2e-11
Q9LSW7	365	1-aminocyclopropane-1-car	no	no	0.940	0.216	0.445	2e-09
Q9LSW6	362	1-aminocyclopropane-1-car	no	no	0.690	0.160	0.533	8e-09

>sp|Q9LTH7|ACH12_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana GN=At5g59540 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 6/84 (7%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEITL 58
           LITNDKF S  HRVL+ ++G RIS+ SFF ++    SR YGP+KEL+SEENPP Y +IT+
Sbjct: 284 LITNDKFVSVEHRVLANRQGPRISVASFFSSSMRPNSRVYGPMKELVSEENPPKYRDITI 343

Query: 59  KDIYNN---QSSIEGLSALEKLKL 79
           K+ Y+    +  ++G S L  +++
Sbjct: 344 KE-YSKIFFEKGLDGTSHLSNIRI 366

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -

>sp|O04847|DV4H_CATRO Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 44/66 (66%), Gaps = 6/66 (9%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFF------MNNSCSRQYGPIKELLSEENPPLYP 54
           LITNDKFKS  HRVL+ K G RIS+   F            R YGPIKEL+SEENPP+Y 
Sbjct: 313 LITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYK 372

Query: 55  EITLKD 60
           E+T+KD
Sbjct: 373 EVTVKD 378

Catalyzes the C4-hydroxylation of desacetoxyvindoline.

Catharanthus roseus (taxid: 4058)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 0

>sp|Q8H1S4|ACCH3_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 52/84 (61%), Gaps = 5/84 (5%)

Query: 1   LITNDKFKSAYHRVLSKKEG-SRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEIT 57
           LITNDKF S  HRVL+ +   +R+S+  FF        R YGPI+EL+SEENPP Y E T
Sbjct: 286 LITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEENPPKYRETT 345

Query: 58  LKD--IYNNQSSIEGLSALEKLKL 79
           +KD   Y N   ++G SAL   K+
Sbjct: 346 IKDYATYFNAKGLDGTSALLHFKI 369

Arabidopsis thaliana (taxid: 3702)

>sp|P10967|ACCH3_SOLLC 1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 4/83 (4%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEITL 58
           L++NDK+ S  HR +S   GSR+SI  FF  +    S+ YGPI ELLSE+NPP Y   T+
Sbjct: 281 LLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTV 340

Query: 59  KD--IYNNQSSIEGLSALEKLKL 79
           KD   Y +   ++G SAL + K+
Sbjct: 341 KDHTSYLHNRGLDGTSALSRYKI 363

Solanum lycopersicum (taxid: 4081)

>sp|Q9C5K7|ACCH2_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 52/84 (61%), Gaps = 5/84 (5%)

Query: 1   LITNDKFKSAYHRVLSKKEG-SRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEIT 57
           LITNDKF S  HRVL+ +   +R+S+  FF  +     R YGPIKEL+SEENPP Y E T
Sbjct: 286 LITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNPRVYGPIKELVSEENPPKYRETT 345

Query: 58  LKD--IYNNQSSIEGLSALEKLKL 79
           ++D   Y N   + G SAL   K+
Sbjct: 346 IRDYATYFNGKGLGGTSALLDFKV 369

Arabidopsis thaliana (taxid: 3702)

>sp|P93821|ACCH7_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 7 OS=Arabidopsis thaliana GN=At1g04380 PE=1 SV=1

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 2/60 (3%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMN--NSCSRQYGPIKELLSEENPPLYPEITL 58
           L+TNDKF S  HRVL+ + G RISI  FF +  N  S  YGPIKELLSEENPP Y + T+
Sbjct: 263 LMTNDKFISVDHRVLTNRVGPRISIACFFSSSMNPNSTVYGPIKELLSEENPPKYRDFTI 322

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 8/85 (9%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFF----MNNSCSRQYGPIKELLSEENPPLYPEI 56
           LITNDKF S  HRVL+   G RIS+  FF    M N   R YGPIKE+LSEENPP Y + 
Sbjct: 283 LITNDKFISVEHRVLANVAGPRISVACFFSSYLMANP--RVYGPIKEILSEENPPNYRDT 340

Query: 57  TLKDI--YNNQSSIEGLSALEKLKL 79
           T+ +   +      +G S L  LK+
Sbjct: 341 TITEYAKFYRSKGFDGTSGLLYLKI 365

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 4/83 (4%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEITL 58
           LITNDKF S  HRVL+   G RIS+ SFF ++    S  YGP+KEL+SEENPP Y + TL
Sbjct: 282 LITNDKFISVEHRVLANTRGPRISVASFFSSSIRENSTVYGPMKELVSEENPPKYRDTTL 341

Query: 59  KDIYNN--QSSIEGLSALEKLKL 79
           ++      +  ++G S L   ++
Sbjct: 342 REYSEGYFKKGLDGTSHLSNFRI 364

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q9LSW7|ACCH9_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 9 OS=Arabidopsis thaliana GN=At5g43440 PE=2 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 4/83 (4%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSC--SRQYGPIKELLSEENPPLYPEITL 58
           LITNDKF S  HRV + ++G RIS+  F  +     S  YGPIKELLS+ENP  Y +IT+
Sbjct: 283 LITNDKFLSMEHRVRANRDGPRISVACFVSSGVFPNSTVYGPIKELLSDENPAKYRDITI 342

Query: 59  KD--IYNNQSSIEGLSALEKLKL 79
            +  +    S  +G S L K ++
Sbjct: 343 PEYTVGYLASIFDGKSHLSKFRI 365

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q9LSW6|ACH10_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 10 OS=Arabidopsis thaliana GN=At5g43450 PE=2 SV=1

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 2/60 (3%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSC--SRQYGPIKELLSEENPPLYPEITL 58
           LITNDKF S  HRV   K+  RIS+  FF ++    S  YGPIK+LLS+ENP  Y +IT+
Sbjct: 280 LITNDKFLSVEHRVRPNKDRPRISVACFFSSSLSPNSTVYGPIKDLLSDENPAKYKDITI 339

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
255638215	373	unknown [Glycine max]	0.940	0.211	0.523	2e-15
356527372	690	PREDICTED: 1-aminocyclopropane-1-carboxy	0.940	0.114	0.523	2e-15
296083605	332	unnamed protein product [Vitis vinifera]	0.940	0.237	0.542	3e-15
147818396	367	hypothetical protein VITISV_000986 [Viti	0.940	0.215	0.542	3e-15
359806352	375	uncharacterized protein LOC100790198 [Gl	0.940	0.210	0.534	4e-15
118489003	370	unknown [Populus trichocarpa x Populus d	0.940	0.213	0.542	4e-15
388500864	374	unknown [Lotus japonicus]	0.714	0.160	0.661	5e-15
359477716	673	PREDICTED: 1-aminocyclopropane-1-carboxy	0.940	0.117	0.542	6e-15
224111002	374	predicted protein [Populus trichocarpa]	0.940	0.211	0.530	1e-14
357451781	349	1-aminocyclopropane-1-carboxylate oxidas	0.928	0.223	0.567	1e-14

>gi|255638215|gb|ACU19421.1| unknown [Glycine max]

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 59/86 (68%), Gaps = 7/86 (8%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN-----SCSRQYGPIKELLSEENPPLYPE 55
           LITNDKF S YHRVLS+  G RIS+ SFF+N+       S+ YGPIKELLSEENPP+Y +
Sbjct: 288 LITNDKFVSVYHRVLSQNTGPRISVASFFVNSHDPVEGTSKMYGPIKELLSEENPPIYRD 347

Query: 56  ITLKDI--YNNQSSIEGLSALEKLKL 79
            TLK+   Y     ++G S+L+  ++
Sbjct: 348 TTLKEFLAYYYAKGLDGNSSLDPFRV 373

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527372|ref|XP_003532285.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 12-like [Glycine max]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 59/86 (68%), Gaps = 7/86 (8%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN-----SCSRQYGPIKELLSEENPPLYPE 55
           LITNDKF S YHRVLS+  G RIS+ SFF+N+       S+ YGPIKELLSEENPP+Y +
Sbjct: 605 LITNDKFVSVYHRVLSQNTGPRISVASFFVNSHDPVEGTSKMYGPIKELLSEENPPIYRD 664

Query: 56  ITLKDI--YNNQSSIEGLSALEKLKL 79
            TLK+   Y     ++G S+L+  ++
Sbjct: 665 TTLKEFLAYYYAKGLDGNSSLDPFRV 690

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296083605|emb|CBI23594.3| unnamed protein product [Vitis vinifera]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 4/83 (4%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEITL 58
           LITND+FKS  HRVL+  +G R+S+  FF        + YGPIKELLSEENPP Y EIT+
Sbjct: 250 LITNDRFKSVEHRVLASHKGPRVSVACFFSTALLPSLKLYGPIKELLSEENPPKYREITV 309

Query: 59  KDI--YNNQSSIEGLSALEKLKL 79
           +D   Y N   ++G SALE  KL
Sbjct: 310 RDFVAYFNAKGLDGTSALEHFKL 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147818396|emb|CAN62402.1| hypothetical protein VITISV_000986 [Vitis vinifera]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 4/83 (4%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEITL 58
           LITND+FKS  HRVL+  +G R+S+  FF        + YGPIKELLSEENPP Y EIT+
Sbjct: 285 LITNDRFKSVEHRVLASHKGPRVSVACFFSTALLPSLKLYGPIKELLSEENPPKYREITV 344

Query: 59  KDI--YNNQSSIEGLSALEKLKL 79
           +D   Y N   ++G SALE  KL
Sbjct: 345 RDFVAYFNAKGLDGTSALEHFKL 367

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806352|ref|NP_001241230.1| uncharacterized protein LOC100790198 [Glycine max] gi|255647188|gb|ACU24062.1| unknown [Glycine max]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 7/86 (8%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN-----SCSRQYGPIKELLSEENPPLYPE 55
           LITNDKF S YHRVLS+  G RIS+ SFF+N+       S+ YGPIKELLSEENPP+Y +
Sbjct: 290 LITNDKFVSVYHRVLSQNTGPRISVASFFVNSHDPAEGTSKVYGPIKELLSEENPPIYRD 349

Query: 56  ITLKDI--YNNQSSIEGLSALEKLKL 79
            TLK+   Y     ++G S+L   +L
Sbjct: 350 TTLKEFLAYYYAKGLDGNSSLGPFRL 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489003|gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides]

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 4/83 (4%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEITL 58
           LI+NDKFKS  HRV++   G R+S+ SFF  +    +R YGPIKELLSEENPP+Y EIT+
Sbjct: 288 LISNDKFKSVEHRVVANHIGPRVSVASFFTPHLYPSTRLYGPIKELLSEENPPIYCEITV 347

Query: 59  KDI--YNNQSSIEGLSALEKLKL 79
           KD   Y +   ++G SAL   KL
Sbjct: 348 KDFIAYYDSKGLDGNSALPHFKL 370

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500864|gb|AFK38498.1| unknown [Lotus japonicus]

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 2/62 (3%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEITL 58
           LI+NDKFKSA HRVL+ K G RIS+  FF  +   C+R YGPIKELLSEENPPLY E T+
Sbjct: 291 LISNDKFKSARHRVLANKVGPRISVACFFSTHFQPCNRVYGPIKELLSEENPPLYKETTV 350

Query: 59  KD 60
           +D
Sbjct: 351 RD 352

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477716|ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3 [Vitis vinifera]

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 4/83 (4%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEITL 58
           LITND+FKS  HRVL+  +G R+S+  FF        + YGPIKELLSEENPP Y EIT+
Sbjct: 591 LITNDRFKSVEHRVLASHKGPRVSVACFFSTALLPSLKLYGPIKELLSEENPPKYREITV 650

Query: 59  KDI--YNNQSSIEGLSALEKLKL 79
           +D   Y N   ++G SALE  KL
Sbjct: 651 RDFVAYFNAKGLDGTSALEHFKL 673

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111002|ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|222864751|gb|EEF01882.1| predicted protein [Populus trichocarpa]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 4/83 (4%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEITL 58
           LI+NDKFKS  HRV++   G R+S+ SFF  +    +R YGPIKELLSEENPP+Y EIT+
Sbjct: 292 LISNDKFKSVEHRVVANHIGPRVSVASFFTPHLYPSTRLYGPIKELLSEENPPIYCEITV 351

Query: 59  KDI--YNNQSSIEGLSALEKLKL 79
           KD   Y +   ++G SAL   K+
Sbjct: 352 KDFIAYYDSKGLDGNSALPHFKV 374

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357451781|ref|XP_003596167.1| 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago truncatula] gi|355485215|gb|AES66418.1| 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago truncatula]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/81 (56%), Positives = 56/81 (69%), Gaps = 3/81 (3%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKD 60
           L+TNDKF S  HRVL+K  G RIS+ S F  +  S  YGPIKELLSEENPPLY +++LKD
Sbjct: 270 LVTNDKFISVQHRVLAKHIGPRISVASLFRTDDESIVYGPIKELLSEENPPLYRDVSLKD 329

Query: 61  IYNNQSSIEGL--SALEKLKL 79
            Y+ Q   +G+  SAL   KL
Sbjct: 330 -YSTQYYAKGIGTSALSHFKL 349

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
TAIR|locus:2148303	366	AT5G59540 [Arabidopsis thalian	0.928	0.213	0.488	8.1e-15
TAIR|locus:2009175	369	AT1G06650 [Arabidopsis thalian	0.940	0.214	0.488	6.4e-13
TAIR|locus:2148403	364	AT5G59530 [Arabidopsis thalian	0.940	0.217	0.457	1.3e-12
TAIR|locus:2018274	345	AT1G04380 [Arabidopsis thalian	0.940	0.228	0.469	1.9e-12
TAIR|locus:2009130	365	AT1G06620 [Arabidopsis thalian	0.940	0.216	0.469	4.8e-12
TAIR|locus:2009210	369	AT1G06640 [Arabidopsis thalian	0.940	0.214	0.488	4.9e-12
TAIR|locus:2824199	366	AT1G06645 [Arabidopsis thalian	0.940	0.215	0.440	3.7e-11
TAIR|locus:2052781	358	AT2G30830 [Arabidopsis thalian	0.880	0.206	0.474	2e-10
TAIR|locus:2176456	365	AT5G43440 [Arabidopsis thalian	0.940	0.216	0.457	2.1e-10
TAIR|locus:2052796	362	AT2G30840 [Arabidopsis thalian	0.833	0.193	0.506	2.7e-10

TAIR|locus:2148303 AT5G59540 [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 8.1e-15, P = 8.1e-15
 Identities = 41/84 (48%), Positives = 59/84 (70%)

Query:     1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSC--SRQYGPIKELLSEENPPLYPEITL 58
             LITNDKF S  HRVL+ ++G RIS+ SFF ++    SR YGP+KEL+SEENPP Y +IT+
Sbjct:   284 LITNDKFVSVEHRVLANRQGPRISVASFFSSSMRPNSRVYGPMKELVSEENPPKYRDITI 343

Query:    59 KDIYNN---QSSIEGLSALEKLKL 79
             K+ Y+    +  ++G S L  +++
Sbjct:   344 KE-YSKIFFEKGLDGTSHLSNIRI 366

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2009175 AT1G06650 [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 6.4e-13, P = 6.4e-13
 Identities = 41/84 (48%), Positives = 52/84 (61%)

Query:     1 LITNDKFKSAYHRVLSKKEG-SRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEIT 57
             LITNDKF S  HRVL+ +   +R+S+  FF        R YGPI+EL+SEENPP Y E T
Sbjct:   286 LITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEENPPKYRETT 345

Query:    58 LKDI--YNNQSSIEGLSALEKLKL 79
             +KD   Y N   ++G SAL   K+
Sbjct:   346 IKDYATYFNAKGLDGTSALLHFKI 369

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=RCA

TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 38/83 (45%), Positives = 52/83 (62%)

Query:     1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEITL 58
             LITNDKF S  HRVL+   G RIS+ SFF ++    S  YGP+KEL+SEENPP Y + TL
Sbjct:   282 LITNDKFISVEHRVLANTRGPRISVASFFSSSIRENSTVYGPMKELVSEENPPKYRDTTL 341

Query:    59 KDIYNN--QSSIEGLSALEKLKL 79
             ++      +  ++G S L   ++
Sbjct:   342 REYSEGYFKKGLDGTSHLSNFRI 364

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010043 "response to zinc ion" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2018274 AT1G04380 [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 39/83 (46%), Positives = 51/83 (61%)

Query:     1 LITNDKFKSAYHRVLSKKEGSRISIESFFMN--NSCSRQYGPIKELLSEENPPLYPEITL 58
             L+TNDKF S  HRVL+ + G RISI  FF +  N  S  YGPIKELLSEENPP Y + T+
Sbjct:   263 LMTNDKFISVDHRVLTNRVGPRISIACFFSSSMNPNSTVYGPIKELLSEENPPKYRDFTI 322

Query:    59 KDIYNN--QSSIEGLSALEKLKL 79
              +      +  ++G S L   ++
Sbjct:   323 PEYSKGYIEKGLDGTSHLSHYRI 345

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2009130 AT1G06620 [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 4.8e-12, P = 4.8e-12
 Identities = 39/83 (46%), Positives = 50/83 (60%)

Query:     1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCS--RQYGPIKELLSEENPPLYPEITL 58
             LITNDKF S  HRVL+   G RIS+  FF +   +  R YGPIKE+LSEENPP Y + T+
Sbjct:   283 LITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTI 342

Query:    59 KDI--YNNQSSIEGLSALEKLKL 79
              +   +      +G S L  LK+
Sbjct:   343 TEYAKFYRSKGFDGTSGLLYLKI 365

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2009210 AT1G06640 [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 4.9e-12, P = 4.9e-12
 Identities = 41/84 (48%), Positives = 52/84 (61%)

Query:     1 LITNDKFKSAYHRVLSKKEG-SRISIESFFMNN--SCSRQYGPIKELLSEENPPLYPEIT 57
             LITNDKF S  HRVL+ +   +R+S+  FF  +     R YGPIKEL+SEENPP Y E T
Sbjct:   286 LITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNPRVYGPIKELVSEENPPKYRETT 345

Query:    58 LKDI--YNNQSSIEGLSALEKLKL 79
             ++D   Y N   + G SAL   K+
Sbjct:   346 IRDYATYFNGKGLGGTSALLDFKV 369

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016126 "sterol biosynthetic process" evidence=RCA

TAIR|locus:2824199 AT1G06645 [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 3.7e-11, P = 3.7e-11
 Identities = 37/84 (44%), Positives = 51/84 (60%)

Query:     1 LITNDKFKSAYHRVLSKKEG-SRISIESFFMN--NSCSRQYGPIKELLSEENPPLYPEIT 57
             LITNDKF S  HRVL+ +   +R+S+  FF          YGPI+EL+S+ENPP Y E T
Sbjct:   283 LITNDKFVSLEHRVLANRATRARVSVAGFFTTAMRPNPTMYGPIRELVSKENPPKYRETT 342

Query:    58 LKDI--YNNQSSIEGLSALEKLKL 79
             ++D   Y +   ++G SAL   K+
Sbjct:   343 IRDYTAYFSAKGLDGTSALLHFKI 366

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2052781 AT2G30830 [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 37/78 (47%), Positives = 50/78 (64%)

Query:     1 LITNDKFKSAYHRVLSKK-EGSRISIESFFMNNSCSRQ-YGPIKELLSEENPPLYPEITL 58
             LITNDKF S  HRVL+ + E  RIS  SFFM+   + Q YGP+KELLS++NPP Y   T 
Sbjct:   276 LITNDKFVSVEHRVLANRGEEPRISSASFFMHTIPNEQVYGPMKELLSKQNPPKYRNTTT 335

Query:    59 KDIYNNQSS--IEGLSAL 74
              ++  +  +  ++G S L
Sbjct:   336 TEMARHYLARGLDGTSPL 353

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009815 "1-aminocyclopropane-1-carboxylate oxidase activity" evidence=ISS

TAIR|locus:2176456 AT5G43440 [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 2.1e-10, P = 2.1e-10
 Identities = 38/83 (45%), Positives = 51/83 (61%)

Query:     1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSC--SRQYGPIKELLSEENPPLYPEITL 58
             LITNDKF S  HRV + ++G RIS+  F  +     S  YGPIKELLS+ENP  Y +IT+
Sbjct:   283 LITNDKFLSMEHRVRANRDGPRISVACFVSSGVFPNSTVYGPIKELLSDENPAKYRDITI 342

Query:    59 KDI-YNNQSSI-EGLSALEKLKL 79
              +      +SI +G S L K ++
Sbjct:   343 PEYTVGYLASIFDGKSHLSKFRI 365

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009815 "1-aminocyclopropane-1-carboxylate oxidase activity" evidence=ISS

TAIR|locus:2052796 AT2G30840 [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 37/73 (50%), Positives = 48/73 (65%)

Query:     1 LITNDKFKSAYHRVLSKK-EGSRISIESFFMNNSCS-RQYGPIKELLSEENPPLYPEITL 58
             L+TND+F S  HRVL+ K E  RIS+ SFF++   S R YGPIKELLSE+N P Y + T+
Sbjct:   280 LMTNDQFVSVEHRVLANKGEKPRISVASFFVHPLPSLRVYGPIKELLSEQNLPKYRDTTV 339

Query:    59 KDIYNNQSSIEGL 71
              + Y +     GL
Sbjct:   340 TE-YTSHYMARGL 351

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0009691 "cytokinin biosynthetic process" evidence=RCA

GO:0009815 "1-aminocyclopropane-1-carboxylate oxidase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00020192001	SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (352 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00008183001	SubName- Full=Chromosome undetermined scaffold_1274, whole genome shotgun sequence; (163 aa)			•						0.431

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	84
PLN02393	362	PLN02393, PLN02393, leucoanthocyanidin dioxygenase	3e-09
PLN03178	360	PLN03178, PLN03178, leucoanthocyanidin dioxygenase	2e-08
pfam03171	96	pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe	3e-07
PLN02254	358	PLN02254, PLN02254, gibberellin 3-beta-dioxygenase	4e-07
PLN02750	345	PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy	8e-07
PLN02299	321	PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl	8e-07
PLN02758	361	PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy	2e-06
PLN02639	337	PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy	1e-05
PLN02276	361	PLN02276, PLN02276, gibberellin 20-oxidase	1e-05
PLN02997	325	PLN02997, PLN02997, flavonol synthase	1e-05
PLN03001	262	PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy	2e-05
PLN02904	357	PLN02904, PLN02904, oxidoreductase	2e-05
PLN02912	348	PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy	5e-05
PLN02704	335	PLN02704, PLN02704, flavonol synthase	6e-05
PLN00417	348	PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy	1e-04
PLN02947	374	PLN02947, PLN02947, oxidoreductase	1e-04
PLN02156	335	PLN02156, PLN02156, gibberellin 2-beta-dioxygenase	2e-04
PLN02403	303	PLN02403, PLN02403, aminocyclopropanecarboxylate o	4e-04
PLN02365	300	PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy	0.001
PLN02216	357	PLN02216, PLN02216, protein SRG1	0.002
PTZ00273	320	PTZ00273, PTZ00273, oxidase reductase; Provisional	0.003

>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein

 Score = 51.2 bits (123), Expect = 3e-09
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 2   ITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKD- 60
           ++N  +KS  HRV+      R+S+ +FF N        P+KEL++ + P LYP +T  + 
Sbjct: 282 LSNAIYKSVEHRVIVNSAKERVSL-AFFYNPKSDLPIEPLKELVTPDRPALYPPMTFDEY 340

Query: 61  -IYNNQSSIEGLSALEKLKLER 81
            ++       G S +E LK  R
Sbjct: 341 RLFIRTKGPRGKSQVESLKSPR 362

Length = 362

>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional

 Score = 48.6 bits (116), Expect = 2e-08
 Identities = 21/60 (35%), Positives = 30/60 (50%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKD 60
           +++N ++KS  HR L  KE  RIS   F           P+ EL+S+E PP +P  T   
Sbjct: 278 ILSNGRYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVSKEEPPKFPPRTFGQ 337

Length = 360

>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily

 Score = 43.6 bits (103), Expect = 3e-07
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 1  LITNDKFKSAYHRVLSKKEGSRISIESFFM 30
          +++N ++KS  HRVL    G RISI  F  
Sbjct: 66 VLSNGRYKSVLHRVLPNTGGERISIAFFLR 95

This family contains members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily. This family includes the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity EC:1.14.11.2 catalyzing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 <=> procollagen trans- 4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. Length = 96

>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase

 Score = 45.1 bits (107), Expect = 4e-07
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKD 60
           +++N +F S  HR +  K   RIS+ ++F       Q  P+ +L+   +PPLY  +T K+
Sbjct: 278 ILSNGRFPSVLHRAVVNKTRHRISV-AYFYGPPSDVQISPLPKLVDPNHPPLYRSVTWKE 336

Length = 358

>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein

 Score = 44.6 bits (105), Expect = 8e-07
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 3   TNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPE 55
           TND + SA HRV+   +  R SI  FF   S      P+ EL++E+NPP Y E
Sbjct: 264 TNDLYWSAEHRVVVNSQKERFSIPFFFFP-SHYVNIKPLDELINEQNPPKYKE 315

Length = 345

>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase

 Score = 44.4 bits (105), Expect = 8e-07
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEE--NPPLYPEITL 58
           +ITN K+KS  HRV+++ +G+R+SI SF+   S +  Y P   L+ +E     +YP+   
Sbjct: 226 VITNGKYKSVMHRVVAQTDGNRMSIASFYNPGSDAVIY-PAPALVEKEAEEEQVYPKFVF 284

Query: 59  KD 60
           +D
Sbjct: 285 ED 286

Length = 321

>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLY 53
           ++TN K+KS  HR ++ KE  R+SI +F+   S   + GP+ EL+ +ENP  Y
Sbjct: 280 VLTNGKYKSVEHRAVTNKEKDRLSIVTFYA-PSYEVELGPMPELVDDENPCKY 331

Length = 361

>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 2   ITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI 61
           ++N ++KS +HR +   +  R+S+ SF      +    P K+L  +    +Y + T  + 
Sbjct: 259 LSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAV-ISPAKKLTDDGTAAVYRDFTYAEY 317

Query: 62  Y 62
           Y
Sbjct: 318 Y 318

Length = 337

>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 3   TNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEIT 57
           +N ++KS  HR +   E  R S+ +FF+     +   P +EL+  E P  YP+ T
Sbjct: 275 SNGRYKSCLHRAVVNSERERRSL-AFFLCPKEDKVVRPPQELVDREGPRKYPDFT 328

Length = 361

>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase

 Score = 40.7 bits (95), Expect = 1e-05
 Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 2   ITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI 61
           +TN +FK+  HR  + KE  RIS    F+        GP+ EL  +ENPP +  +   D 
Sbjct: 251 MTNGRFKNVLHRAKTDKERLRISW-PVFVAPRADMSVGPLPELTGDENPPKFETLIYND- 308

Query: 62  YNNQSSIEGLSALEKLKL 79
           Y +Q  I G  ALE L +
Sbjct: 309 YIDQ-KIRGW-ALEDLPV 324

Length = 325

>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein

 Score = 40.4 bits (94), Expect = 2e-05
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEI 56
           +ITN  +KSA HR ++    +R+S+ +F  + + + +  P   L +E  PP Y EI
Sbjct: 183 IITNGNYKSAQHRAIANANKARLSVATFH-DPAKTAKIAPASALSTESFPPRYCEI 237

Length = 262

>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase

 Score = 40.3 bits (94), Expect = 2e-05
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKD 60
           +++N  +KS  HRV   K+  R+S  S   +    ++  P  EL++E  P  Y E +  D
Sbjct: 275 VMSNGIYKSVVHRVTVNKDYKRLSFASLH-SLPLHKKISPAPELVNENKPAAYGEFSFND 333

Query: 61  IYNNQSS 67
             +  SS
Sbjct: 334 FLDYISS 340

Length = 357

>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein

 Score = 39.2 bits (91), Expect = 5e-05
 Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEE 48
           +I+NDK+KS  HR +   +  RISI +F+   S     GP +EL++EE
Sbjct: 264 VISNDKYKSVLHRAVVNTDKERISIPTFYC-PSEDAVIGPAQELINEE 310

Length = 348

>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase

 Score = 39.0 bits (91), Expect = 6e-05
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKD 60
           +++N K+KS  HR    KE +R+S    F+        GP+ +L++E+NPP +     KD
Sbjct: 266 ILSNGKYKSVLHRTTVNKEKTRMSW-PVFLEPPSELAVGPLPKLINEDNPPKFKTKKFKD 324

Length = 335

>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein

 Score = 38.4 bits (89), Expect = 1e-04
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEIT 57
           +++N  +KS  HRV++ +E  RIS+ + F      ++  P+  L+SE  P LY  + 
Sbjct: 271 IMSNGIYKSPVHRVVTNREKERISVAT-FCIPGADKEIQPVDGLVSEARPRLYKTVK 326

Length = 348

>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase

 Score = 37.8 bits (88), Expect = 1e-04
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 9/55 (16%)

Query: 3   TNDKFKSAYHRVLSKKEGSRISIESF----FMNNSCSRQYGPIKELLSEENPPLY 53
           +N ++KS  HRV       RIS+ S     F      R  GP  EL+ E+NP  Y
Sbjct: 294 SNGRYKSVLHRVRVNSTKPRISVASLHSLPFE-----RVVGPAPELVDEQNPRRY 343

Length = 374

>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase

 Score = 37.7 bits (87), Expect = 2e-04
 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEIT 57
           ++TN +FKS  HRV++  + SRIS+  +F     S +  P+  L+ +++  LY E T
Sbjct: 248 VMTNGRFKSVKHRVVTNTKRSRISM-IYFAGPPLSEKIAPLSCLVPKQDDCLYNEFT 303

Length = 335

>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase

 Score = 36.8 bits (85), Expect = 4e-04
 Identities = 13/29 (44%), Positives = 23/29 (79%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFF 29
           +++N ++KS  HRV++ K GSR+SI +F+
Sbjct: 222 VLSNGRYKSTLHRVMADKNGSRLSIATFY 250

Length = 303

>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase

 Score = 35.2 bits (81), Expect = 0.001
 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 3   TNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDIY 62
           +N +  +  HRV  K+   RISI SF +            E +  E+P LY   T +D Y
Sbjct: 221 SNGRLCNVKHRVQCKEATMRISIASFLL-GPKDDDVEAPPEFVDAEHPRLYKPFTYED-Y 278

Query: 63  NNQSSIEGLSALEKLKLER 81
                   L A E L L  
Sbjct: 279 RKLRLSTKLHAGEALALIT 297

Length = 300

>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1

 Score = 34.8 bits (80), Expect = 0.002
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKD 60
           +ITN  ++S  HR +   E  R+S+ +F  N    ++ GP K L+  +   L+  +T K+
Sbjct: 278 IITNGTYRSIEHRGVVNSEKERLSVATFH-NTGMGKEIGPAKSLVERQKAALFKSLTTKE 336

Query: 61  IYN 63
            ++
Sbjct: 337 YFD 339

Length = 357

>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional

 Score = 34.3 bits (79), Expect = 0.003
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 8/61 (13%)

Query: 3   TNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKEL---LSEENPPLYPEITLK 59
           +N +++S  HRV++     R S+  F   N        IK L    SEENPP YP +   
Sbjct: 248 SNGRYRSTPHRVVNT-GVERYSMPFFCEPNP----NVIIKCLDNCHSEENPPKYPPVRAV 302

Query: 60  D 60
           D
Sbjct: 303 D 303

Length = 320

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	84
PLN02947	374	oxidoreductase	99.9
PLN02216	357	protein SRG1	99.9
PLN02904	357	oxidoreductase	99.89
PLN02758	361	oxidoreductase, 2OG-Fe(II) oxygenase family protei	99.88
PLN02639	337	oxidoreductase, 2OG-Fe(II) oxygenase family protei	99.88
PLN02393	362	leucoanthocyanidin dioxygenase like protein	99.87
PLN02912	348	oxidoreductase, 2OG-Fe(II) oxygenase family protei	99.86
PLN02276	361	gibberellin 20-oxidase	99.86
PLN03178	360	leucoanthocyanidin dioxygenase; Provisional	99.86
PLN02254	358	gibberellin 3-beta-dioxygenase	99.86
PLN03001	262	oxidoreductase, 2OG-Fe(II) oxygenase family protei	99.86
PLN02365	300	2-oxoglutarate-dependent dioxygenase	99.86
PLN02299	321	1-aminocyclopropane-1-carboxylate oxidase	99.85
PLN02704	335	flavonol synthase	99.85
KOG0143	322	consensus Iron/ascorbate family oxidoreductases [S	99.84
PLN02156	335	gibberellin 2-beta-dioxygenase	99.84
PLN02750	345	oxidoreductase, 2OG-Fe(II) oxygenase family protei	99.82
PLN02997	325	flavonol synthase	99.82
PLN03002	332	oxidoreductase, 2OG-Fe(II) oxygenase family protei	99.8
PLN02515	358	naringenin,2-oxoglutarate 3-dioxygenase	99.8
PLN00417	348	oxidoreductase, 2OG-Fe(II) oxygenase family protei	99.8
PLN02485	329	oxidoreductase	99.8
PTZ00273	320	oxidase reductase; Provisional	99.79
PLN02403	303	aminocyclopropanecarboxylate oxidase	99.75
PLN02984	341	oxidoreductase, 2OG-Fe(II) oxygenase family protei	99.67
COG3491	322	PcbC Isopenicillin N synthase and related dioxygen	99.52
PF03171	98	2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent	98.75

>PLN02947 oxidoreductase

Probab=99.90  E-value=5.5e-24  Score=157.18  Aligned_cols=78  Identities=31%  Similarity=0.440  Sum_probs=71.7

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH--HHHhhcCCccccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI--YNNQSSIEGLSALEKLK   78 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey--~~~~~~~~~~~~l~~~~   78 (84)
                      +||||+|||++|||++++.++|||||||++|+. |+.|+|+++|+++++|++|++++++||  .+..+...+++.|+.+|
T Consensus       292 ~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~-d~~i~Pl~~lv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~~~  370 (374)
T PLN02947        292 IFSNGRYKSVLHRVRVNSTKPRISVASLHSLPF-ERVVGPAPELVDEQNPRRYMDTDFATFLAYLASAEGKHKNFLESRK  370 (374)
T ss_pred             eeeCCEEeccccccccCCCCCEEEEEEEecCCC-CCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhccCchhhhhhhh
Confidence            699999999999999998999999999999995 999999999999999999999999999  55566777888999888


Q ss_pred             c
Q 037672           79 L   79 (84)
Q Consensus        79 ~   79 (84)
                      +
T Consensus       371 ~  371 (374)
T PLN02947        371 L  371 (374)
T ss_pred             c
Confidence            5

>PLN02216 protein SRG1

Probab=99.90  E-value=7.6e-24  Score=155.48  Aligned_cols=78  Identities=24%  Similarity=0.480  Sum_probs=71.4

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH--HHHhhcCCccccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI--YNNQSSIEGLSALEKLK   78 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey--~~~~~~~~~~~~l~~~~   78 (84)
                      +||||+|||++|||++++.++|||+|||++|+. |++|+|+++|+++++|++|++++++||  .+....+.++..|+.++
T Consensus       278 ~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~-d~~i~p~~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~  356 (357)
T PLN02216        278 IITNGTYRSIEHRGVVNSEKERLSVATFHNTGM-GKEIGPAKSLVERQKAALFKSLTTKEYFDGLFSRELDGKAYLDAMR  356 (357)
T ss_pred             hhcCCeeeccCceeecCCCCCEEEEEEEecCCC-CCeEeCcHHHcCCCCCCCCCCcCHHHHHHHHHhcccCCcchhhhhc
Confidence            699999999999999998999999999999995 999999999999999999999999999  55666677888898887


Q ss_pred             c
Q 037672           79 L   79 (84)
Q Consensus        79 ~   79 (84)
                      |
T Consensus       357 ~  357 (357)
T PLN02216        357 I  357 (357)
T ss_pred             C
Confidence            5

>PLN02904 oxidoreductase

Probab=99.89  E-value=7.2e-24  Score=155.68  Aligned_cols=80  Identities=28%  Similarity=0.456  Sum_probs=72.3

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH--HHHhhcCCccccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI--YNNQSSIEGLSALEKLK   78 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey--~~~~~~~~~~~~l~~~~   78 (84)
                      +||||+|||++|||++++.++|||||||++|+. |+.|+|+++|+++++|++|++++|+||  .+.++.+.+++.++.++
T Consensus       275 ~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~-d~~i~Pl~~~v~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~  353 (357)
T PLN02904        275 VMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPL-HKKISPAPELVNENKPAAYGEFSFNDFLDYISSNDITQERFIDTLK  353 (357)
T ss_pred             HHhCCeeeccCCcccCCCCCCEEEEEEeecCCC-CCeEeCCHHHcCCCCCCcCCCCCHHHHHHHHHhcccCcchHHHHhc
Confidence            599999999999999998899999999999995 999999999999999999999999999  55666777888888887


Q ss_pred             ccc
Q 037672           79 LER   81 (84)
Q Consensus        79 ~~~   81 (84)
                      +++
T Consensus       354 ~~~  356 (357)
T PLN02904        354 KNN  356 (357)
T ss_pred             cCC
Confidence            753

>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=99.88  E-value=3.9e-23  Score=151.91  Aligned_cols=78  Identities=33%  Similarity=0.538  Sum_probs=69.7

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH--HHHhhcCCccccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI--YNNQSSIEGLSALEKLK   78 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey--~~~~~~~~~~~~l~~~~   78 (84)
                      +||||+|||++|||++++.++|||+|||++|+. |+.|+|+++|+++++|++|++++++||  .+......++..++.++
T Consensus       280 ~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~-d~~i~pl~elv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~  358 (361)
T PLN02758        280 VLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSY-EVELGPMPELVDDENPCKYRRYNHGEYSRHYVTSKLQGKKTLEFAK  358 (361)
T ss_pred             hhcCCeeecccceeecCCCCCEEEEEEEecCCC-CCeEeCCHHHcCCCCCCcCCCccHHHHHHHHHhcccCchhhhhhhc
Confidence            599999999999999998899999999999995 999999999999999999999999999  45555566777788776


Q ss_pred             c
Q 037672           79 L   79 (84)
Q Consensus        79 ~   79 (84)
                      +
T Consensus       359 ~  359 (361)
T PLN02758        359 I  359 (361)
T ss_pred             c
Confidence            5

>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=99.88  E-value=4.6e-23  Score=150.19  Aligned_cols=77  Identities=22%  Similarity=0.417  Sum_probs=68.7

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH--HHHhhcCCccccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI--YNNQSSIEGLSALEKLK   78 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey--~~~~~~~~~~~~l~~~~   78 (84)
                      +||||+|||+.|||++++.++|||+|||++|+. |++|.|+++|+++++|++|++++++||  .+..++..+++.|+.|+
T Consensus       258 ~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~-d~~i~pl~~~~~~~~p~~y~p~~~~e~~~~~~~~~~~~~~~l~~~~  336 (337)
T PLN02639        258 ALSNGRYKSVWHRAVVNTDKERMSVASFLCPCD-DAVISPAKKLTDDGTAAVYRDFTYAEYYKKFWSRNLDQEHCLELFK  336 (337)
T ss_pred             HHhCCeeeccCcccccCCCCCEEEEEEEecCCC-CceEeCchHHcCCCCCCCCCCCCHHHHHHHHHhccCCCchhhHhhc
Confidence            599999999999999998899999999999995 999999999999999999999999999  44555666777787765

>PLN02393 leucoanthocyanidin dioxygenase like protein

Probab=99.87  E-value=1.2e-22  Score=149.29  Aligned_cols=78  Identities=31%  Similarity=0.561  Sum_probs=70.0

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH--HHHhhcCCccccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI--YNNQSSIEGLSALEKLK   78 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey--~~~~~~~~~~~~l~~~~   78 (84)
                      +||||+|||++|||+++..++|||+|||++|+. |++|.|+++|+++++|++|++++++||  .+.++..++++.++.+|
T Consensus       281 ~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~~-d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~  359 (362)
T PLN02393        281 VLSNAIYKSVEHRVIVNSAKERVSLAFFYNPKS-DLPIEPLKELVTPDRPALYPPMTFDEYRLFIRTKGPRGKSQVESLK  359 (362)
T ss_pred             hhcCCeeeccceecccCCCCCEEEEEEEecCCC-CceEeCcHHhcCCCCCCCCCCccHHHHHHHHHhcccCcchHHhhhc
Confidence            599999999999999998899999999999995 999999999999999999999999999  45556667777787777


Q ss_pred             c
Q 037672           79 L   79 (84)
Q Consensus        79 ~   79 (84)
                      +
T Consensus       360 ~  360 (362)
T PLN02393        360 S  360 (362)
T ss_pred             c
Confidence            5

>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=99.86  E-value=2.1e-22  Score=147.44  Aligned_cols=79  Identities=29%  Similarity=0.512  Sum_probs=69.7

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCC--CCCCCCcccHHHH--HHHhhcCCccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEE--NPPLYPEITLKDI--YNNQSSIEGLSALEK   76 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~--~p~~y~~~~~~ey--~~~~~~~~~~~~l~~   76 (84)
                      +||||+|||++|||++++.++|||+|||++|+. |+.|.|+++|++++  +|++|++++|+||  .+......+++.|+.
T Consensus       264 ~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~-d~~i~pl~~~v~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~  342 (348)
T PLN02912        264 VISNDKYKSVLHRAVVNTDKERISIPTFYCPSE-DAVIGPAQELINEEEDSLAIYRNFTYAEYFEKFWDTAFATESCIDS  342 (348)
T ss_pred             HHhCCEEEcccccccCCCCCCEEEEEEEecCCC-CCeEeCCHHHhCcCCCCCCCCCCCcHHHHHHHHHhcccCCcchhhh
Confidence            599999999999999988899999999999995 99999999999875  4899999999999  455556667888998


Q ss_pred             cccc
Q 037672           77 LKLE   80 (84)
Q Consensus        77 ~~~~   80 (84)
                      ++.+
T Consensus       343 ~~~~  346 (348)
T PLN02912        343 FKAS  346 (348)
T ss_pred             hhcc
Confidence            8864

>PLN02276 gibberellin 20-oxidase

Probab=99.86  E-value=1.5e-22  Score=148.77  Aligned_cols=78  Identities=24%  Similarity=0.489  Sum_probs=69.6

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH--HHHhhcCCccccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI--YNNQSSIEGLSALEKLK   78 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey--~~~~~~~~~~~~l~~~~   78 (84)
                      +||||+|+|++|||++++.++|||+|||++|+. |+.|.|+++|+++++|++|++++++||  .+......++..|+.++
T Consensus       273 ~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~P~~-d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~  351 (361)
T PLN02276        273 ALSNGRYKSCLHRAVVNSERERRSLAFFLCPKE-DKVVRPPQELVDREGPRKYPDFTWSDLLEFTQKHYRADMNTLQAFS  351 (361)
T ss_pred             HHhCCccccccceeecCCCCCEEEEEEEecCCC-CCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhcccchhHHHHHH
Confidence            599999999999999998999999999999995 999999999999999999999999999  44455566677788777


Q ss_pred             c
Q 037672           79 L   79 (84)
Q Consensus        79 ~   79 (84)
                      +
T Consensus       352 ~  352 (361)
T PLN02276        352 N  352 (361)
T ss_pred             H
Confidence            4

>PLN03178 leucoanthocyanidin dioxygenase; Provisional

Probab=99.86  E-value=1.5e-22  Score=148.58  Aligned_cols=80  Identities=26%  Similarity=0.412  Sum_probs=69.9

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCe-eecCccccCCCCCCCCCcccHHHH--HHHhhcCCcccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQ-YGPIKELLSEENPPLYPEITLKDI--YNNQSSIEGLSALEKL   77 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~-v~pl~~~~~~~~p~~y~~~~~~ey--~~~~~~~~~~~~l~~~   77 (84)
                      +||||+|||++|||++++.++|||||||++|+. |.. +.|+++|++.++|++|++++++||  ........+++.++..
T Consensus       278 ~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~-d~~v~~pl~~~v~~~~p~~y~p~~~~eyl~~~~~~~~~~~~~~~~~  356 (360)
T PLN03178        278 ILSNGRYKSILHRGLVNKEKVRISWAVFCEPPK-EKIILKPLPELVSKEEPPKFPPRTFGQHVSHKLFKKPQDERNIDAA  356 (360)
T ss_pred             HHhCCccccccceeecCCCCCeEEEEEEecCCc-ccccccCcHHHcCCCCcccCCCccHHHHHHHHHhcccCcchhHhHH
Confidence            599999999999999988889999999999995 764 699999999889999999999999  4445566678889988


Q ss_pred             cccc
Q 037672           78 KLER   81 (84)
Q Consensus        78 ~~~~   81 (84)
                      +|++
T Consensus       357 ~~~~  360 (360)
T PLN03178        357 DISN  360 (360)
T ss_pred             hccC
Confidence            8863

>PLN02254 gibberellin 3-beta-dioxygenase

Probab=99.86  E-value=2.2e-22  Score=147.96  Aligned_cols=75  Identities=29%  Similarity=0.521  Sum_probs=64.7

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH-HHH-hhcCCccccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI-YNN-QSSIEGLSALEKLK   78 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey-~~~-~~~~~~~~~l~~~~   78 (84)
                      +||||+|||++|||++++.++|||||||++|+. |+.|+|+++|+++++|++|++++++|| ..+ +..+.   .++.++
T Consensus       278 ~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P~~-d~~i~pl~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~---~~~~~~  353 (358)
T PLN02254        278 ILSNGRFPSVLHRAVVNKTRHRISVAYFYGPPS-DVQISPLPKLVDPNHPPLYRSVTWKEYLATKAKHFNK---ALSLIR  353 (358)
T ss_pred             HHhCCeeccccceeecCCCCCEEEEEEEecCCC-CcEEeCcHHhcCCCCCcccCCcCHHHHHHHHHHhhhh---hhhhhh
Confidence            599999999999999999999999999999995 999999999999999999999999999 333 33332   566665


Q ss_pred             c
Q 037672           79 L   79 (84)
Q Consensus        79 ~   79 (84)
                      +
T Consensus       354 ~  354 (358)
T PLN02254        354 N  354 (358)
T ss_pred             c
Confidence            4

>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=99.86  E-value=4.1e-22  Score=141.43  Aligned_cols=75  Identities=28%  Similarity=0.453  Sum_probs=64.6

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH-H-HHhhcCCccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI-Y-NNQSSIEGLSALEK   76 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey-~-~~~~~~~~~~~l~~   76 (84)
                      +||||+|+|++|||+++..++|||||||++|+. |++|.|+++|+++++|++|++++++|| . ...+...++..++.
T Consensus       183 ~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~-d~~i~p~~e~v~~~~p~~y~~~~~~e~l~~~~~~~~~~~~~~~~  259 (262)
T PLN03001        183 IITNGNYKSAQHRAIANANKARLSVATFHDPAK-TAKIAPASALSTESFPPRYCEIVYGEYVSSWYSKGPEGKRNIDA  259 (262)
T ss_pred             HHhCCccccccceEEcCCCCCEEEEEEEEcCCC-CCEEeCChHhcCCCCCCcCCCccHHHHHHHHHHhccCCcchhhh
Confidence            599999999999999998899999999999995 999999999999989999999999999 3 34444445555544

>PLN02365 2-oxoglutarate-dependent dioxygenase

Probab=99.86  E-value=5.7e-22  Score=142.58  Aligned_cols=77  Identities=26%  Similarity=0.369  Sum_probs=65.4

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH-H-HHhhcCCccccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI-Y-NNQSSIEGLSALEKLK   78 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey-~-~~~~~~~~~~~l~~~~   78 (84)
                      +||||+|||++|||++++..+|||||||++|+. |++|+|+++|+++++|++|++++++|| . .......+...++.+.
T Consensus       219 ~~TNG~~~St~HRVv~~~~~~R~Si~~F~~p~~-d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~  297 (300)
T PLN02365        219 AWSNGRLCNVKHRVQCKEATMRISIASFLLGPK-DDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTKLHAGEALALIT  297 (300)
T ss_pred             HHhCCceecccceeEcCCCCCEEEEEEEecCCC-CCeEeCCHHHcCCCCCccCCCccHHHHHHHHHhccccccchHhhhh
Confidence            599999999999999988889999999999995 999999999999889999999999999 3 3334444555555543

>PLN02299 1-aminocyclopropane-1-carboxylate oxidase

Probab=99.85  E-value=1.2e-21  Score=142.22  Aligned_cols=79  Identities=30%  Similarity=0.522  Sum_probs=67.2

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCC--CCCCCCcccHHHH--HHHhhcCCcc-cccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEE--NPPLYPEITLKDI--YNNQSSIEGL-SALE   75 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~--~p~~y~~~~~~ey--~~~~~~~~~~-~~l~   75 (84)
                      +||||+|||+.|||+++..++|||+|||++|+. |++|+|+++|++++  +|++|++++++||  .+......++ ..|+
T Consensus       226 ~~Tng~~kS~~HRVv~~~~~~R~Si~~F~~p~~-d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~~~~~~~~~~  304 (321)
T PLN02299        226 VITNGKYKSVMHRVVAQTDGNRMSIASFYNPGS-DAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAKEPRFE  304 (321)
T ss_pred             HHhCCceecccceeecCCCCCEEEEEEEecCCC-CceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHcccCCccchhh
Confidence            599999999999999998889999999999995 99999999999865  5899999999999  4444445553 6688


Q ss_pred             ccccc
Q 037672           76 KLKLE   80 (84)
Q Consensus        76 ~~~~~   80 (84)
                      .+++.
T Consensus       305 ~~~~~  309 (321)
T PLN02299        305 AMKAM  309 (321)
T ss_pred             hhhcc
Confidence            77763

>PLN02704 flavonol synthase

Probab=99.85  E-value=1.7e-21  Score=141.86  Aligned_cols=60  Identities=35%  Similarity=0.620  Sum_probs=57.9

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|||++|||++++.++|||+|||++|+. |+.|.|+++|+++++|++|++++++||
T Consensus       266 ~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~p~~-d~~i~pl~~~~~~~~p~~Y~~~~~~e~  325 (335)
T PLN02704        266 ILSNGKYKSVLHRTTVNKEKTRMSWPVFLEPPS-ELAVGPLPKLINEDNPPKFKTKKFKDY  325 (335)
T ss_pred             HHhCCeeecccceeecCCCCCeEEEEEEecCCC-CceEeCChHhcCCCCCccCCCCCHHHH
Confidence            599999999999999998899999999999995 999999999999999999999999999

>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.84  E-value=1.4e-21  Score=142.09  Aligned_cols=74  Identities=32%  Similarity=0.593  Sum_probs=64.0

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH--HHHhhcCCccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI--YNNQSSIEGLSALEK   76 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey--~~~~~~~~~~~~l~~   76 (84)
                      +||||+|||++|||++|.+++|+|+|+|+.|.. |..|.|++++++++ |++|+++++.+|  .+..+.+.++..++.
T Consensus       245 ~lSNG~ykSv~HRV~~n~~~~R~Sia~F~~p~~-d~~i~p~~elv~~~-~~~Y~~~~~~~y~~~~~~~~~~~~~~~~~  320 (322)
T KOG0143|consen  245 ILSNGRYKSVLHRVVVNGEKERISVAFFVFPPL-DKVIGPPEELVDEE-PPKYKPFTFGDYLEFYFSKKLQGKTLLDY  320 (322)
T ss_pred             HhhCCcccceEEEEEeCCCCceEEEEEEecCCC-CceecChhhhCCCC-CCccCcEEHHHHHHHHHhccccCcchhhh
Confidence            699999999999999999999999999999995 89999999998877 888999999999  555555555544443

>PLN02156 gibberellin 2-beta-dioxygenase

Probab=99.84  E-value=3.9e-21  Score=140.37  Aligned_cols=60  Identities=33%  Similarity=0.485  Sum_probs=57.8

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|+|+.|||+++..++|||||||++|+. |+.|+|+++|+++++|++|++++++||
T Consensus       248 ~wTNg~~kSt~HRVv~~~~~~R~SiafF~~P~~-d~~i~pl~~~v~~~~p~~y~p~~~~ey  307 (335)
T PLN02156        248 VMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPL-SEKIAPLSCLVPKQDDCLYNEFTWSQY  307 (335)
T ss_pred             HHhCCeeeccceeeecCCCCCEEEEEEeecCCC-CCEEeCChHhcCCCCCccCCCccHHHH
Confidence            599999999999999988899999999999995 999999999999999999999999999

>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=99.82  E-value=9.3e-21  Score=138.44  Aligned_cols=60  Identities=37%  Similarity=0.581  Sum_probs=57.7

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|+|++|||++++.++|||+|||++|+. |++|.|+++++++++|++|++++++||
T Consensus       262 ~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~-d~~i~pl~~~v~~~~p~~y~p~~~~e~  321 (345)
T PLN02750        262 VWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSH-YVNIKPLDELINEQNPPKYKEFNWGKF  321 (345)
T ss_pred             HHhCCeeecccceeccCCCCCEEEEEEeecCCC-CCeecCcHHhcCCCCCCccCCccHHHH
Confidence            599999999999999998899999999999995 999999999999999999999999999

>PLN02997 flavonol synthase

Probab=99.82  E-value=1e-20  Score=137.62  Aligned_cols=60  Identities=35%  Similarity=0.585  Sum_probs=57.7

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|||++|||+++++.+|||+|||++|+. |+.|+|+|+|+++++|++|++++++||
T Consensus       250 ~~TNG~~kSt~HRVv~~~~~~R~Si~fF~~P~~-d~~i~Plp~~v~~~~p~~y~~~~~~e~  309 (325)
T PLN02997        250 RMTNGRFKNVLHRAKTDKERLRISWPVFVAPRA-DMSVGPLPELTGDENPPKFETLIYNDY  309 (325)
T ss_pred             HHhCCccccccceeeCCCCCCEEEEEEEecCCC-CCeEeCChHHcCCCCCCcCCCccHHHH
Confidence            599999999999999988899999999999995 999999999999999999999999999

>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=99.80  E-value=4.6e-20  Score=134.32  Aligned_cols=59  Identities=32%  Similarity=0.350  Sum_probs=55.7

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|||++|||+++. .+|||+|||++|+. |++|.|+++|+++++|++|++++++||
T Consensus       255 ~wTng~~kSt~HRVv~~~-~~R~Sia~F~~p~~-d~~i~pl~~~~~~~~p~~y~~~~~~e~  313 (332)
T PLN03002        255 RWSNGFFKSTLHRVLGNG-QERYSIPFFVEPNH-DCLVECLPTCKSESDLPKYPPIKCSTY  313 (332)
T ss_pred             HHhCCeeECcCCeecCCC-CCeeEEEEEecCCC-CeeEecCCcccCCCCcccCCCccHHHH
Confidence            599999999999999874 68999999999995 999999999999999999999999999

>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase

Probab=99.80  E-value=8.3e-20  Score=134.35  Aligned_cols=59  Identities=29%  Similarity=0.447  Sum_probs=55.0

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|||++|||++++.++|||||||++|+. |++|+|++ ++++++|++|++++++||
T Consensus       264 ~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~-d~~i~Pl~-~~~~~~p~~y~~~t~~ey  322 (358)
T PLN02515        264 YLSNGRFKNADHQAVVNSNCSRLSIATFQNPAP-DATVYPLK-VREGEKPILEEPITFAEM  322 (358)
T ss_pred             HHhCCeeeeecceEECCCCCCEEEEEEEecCCC-CCEEECCC-cCCCCCCCcCCCcCHHHH
Confidence            599999999999999998899999999999995 99999997 666678999999999999

>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=99.80  E-value=5.4e-20  Score=134.79  Aligned_cols=60  Identities=30%  Similarity=0.575  Sum_probs=56.0

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|+|++|||++++..+|||++||++|+. |+.|+|+++++++++|++|++++.++.
T Consensus       271 ~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~~-d~~i~pl~~~v~~~~p~~Y~~~~~~~~  330 (348)
T PLN00417        271 IMSNGIYKSPVHRVVTNREKERISVATFCIPGA-DKEIQPVDGLVSEARPRLYKTVKKYVE  330 (348)
T ss_pred             HHhCCeecccceEEecCCCCCEEEEEEEecCCC-CceecCchHhcCCCCCCCCCCHHHHHH
Confidence            599999999999999998899999999999995 999999999999889999999996665

>PLN02485 oxidoreductase

Probab=99.80  E-value=5.3e-20  Score=133.49  Aligned_cols=60  Identities=15%  Similarity=0.338  Sum_probs=56.5

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccC--CCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLS--EENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~--~~~p~~y~~~~~~ey   61 (84)
                      +||||+|+|++|||++++.++|||+|||++|+. |++|.|++++++  .++|++|++++++||
T Consensus       257 ~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~-d~~i~pl~~~~~~~~~~~~~y~~~t~~e~  318 (329)
T PLN02485        257 IWSNGVYQSTLHRVINNSPKYRVCVAFFYETNF-DAAVEPLDICKEKRTGGSQVFKRVVYGEH  318 (329)
T ss_pred             HHHCCEeeCCCceecCCCCCCeEEEEEEecCCC-CceeecchhhcccccCCCCCCCcEeHHHH
Confidence            599999999999999988899999999999995 999999999987  667899999999999

>PTZ00273 oxidase reductase; Provisional

Probab=99.79  E-value=1e-19  Score=131.46  Aligned_cols=59  Identities=31%  Similarity=0.450  Sum_probs=55.4

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|||++|||+.+ ..+|+|++||+.|+. |++|.|+++|+++++|++|++++++||
T Consensus       246 ~~TnG~~kSt~HRVv~~-~~~R~Si~~F~~p~~-d~~i~pl~~~~~~~~~~~y~~~~~~e~  304 (320)
T PTZ00273        246 MWSNGRYRSTPHRVVNT-GVERYSMPFFCEPNP-NVIIKCLDNCHSEENPPKYPPVRAVDW  304 (320)
T ss_pred             HHHCCeeeCCCccccCC-CCCeEEEEEEEcCCC-CceEecCccccCCCCcccCCceeHHHH
Confidence            59999999999999854 688999999999995 999999999999999999999999999

>PLN02403 aminocyclopropanecarboxylate oxidase

Probab=99.75  E-value=9.9e-19  Score=126.29  Aligned_cols=75  Identities=29%  Similarity=0.519  Sum_probs=61.4

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCC-cccHHHH-H-HHh-hcCCccccccc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYP-EITLKDI-Y-NNQ-SSIEGLSALEK   76 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~-~~~~~ey-~-~~~-~~~~~~~~l~~   76 (84)
                      +||||+|+|+.|||+++.+++|||++||++|+. |++|.|+++++       |+ +++++|| . +.. +...++..|+.
T Consensus       222 ~~Tng~~~S~~HRVv~~~~~~R~Si~~F~~p~~-d~~i~pl~~~~-------~~~~~~~~eyl~~~~~~~~~~~~~~~~~  293 (303)
T PLN02403        222 VLSNGRYKSTLHRVMADKNGSRLSIATFYNPAG-DAIISPAPKLL-------YPSNYRFQDYLKLYSTTKFGDKGPRFES  293 (303)
T ss_pred             HHhCCeeecccceeecCCCCCEEEEEEEEcCCC-CCeEeCchhhC-------CCCCccHHHHHHHHHHhccccccchHHH
Confidence            499999999999999998889999999999995 99999999886       33 4999999 3 333 33445677998


Q ss_pred             ccccccC
Q 037672           77 LKLERRG   83 (84)
Q Consensus        77 ~~~~~~~   83 (84)
                      +++...|
T Consensus       294 ~~~~~~~  300 (303)
T PLN02403        294 MKKMANG  300 (303)
T ss_pred             hhhhhcc
Confidence            8876543

>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=99.67  E-value=9.2e-17  Score=117.68  Aligned_cols=69  Identities=26%  Similarity=0.358  Sum_probs=54.4

Q ss_pred             CeeCCeeecCCceee-cCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH-HHHh--h-cCCcccccc
Q 037672            1 LITNDKFKSAYHRVL-SKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI-YNNQ--S-SIEGLSALE   75 (84)
Q Consensus         1 i~SNG~~kS~~HRVv-~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey-~~~~--~-~~~~~~~l~   75 (84)
                      +||||+|||+.|||+ .+..++|||+|||++|+. |+.|.|          ++|++++++|| ..+.  . ....+..|+
T Consensus       267 ~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~-d~~i~p----------~~y~p~t~~e~l~~~~~~~~~~~~~~~~~  335 (341)
T PLN02984        267 VISDDEYKSVLHRVGKRNKKKERYSICYFVFPEE-DCVIKS----------SKYKPFTYSDFEAQVQLDVKTLGSKVGLS  335 (341)
T ss_pred             hhcCCeeeCCCCccccCCCCCCeEEEEEEecCCC-CCEEcc----------CCcCcccHHHHHHHHHhhhhccCCccccc
Confidence            599999999999996 466789999999999995 898863          68999999999 3322  2 222344588


Q ss_pred             ccccc
Q 037672           76 KLKLE   80 (84)
Q Consensus        76 ~~~~~   80 (84)
                      .+++.
T Consensus       336 ~~~~~  340 (341)
T PLN02984        336 RFKSN  340 (341)
T ss_pred             ceecC
Confidence            88764

>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]

Probab=99.52  E-value=1.1e-14  Score=105.73  Aligned_cols=55  Identities=27%  Similarity=0.291  Sum_probs=46.8

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCc-cccCCCCCCCCCcc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIK-ELLSEENPPLYPEI   56 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~-~~~~~~~p~~y~~~   56 (84)
                      .||||+|+||.|||++|+.++|||||||+.|+. |+.|.|+. .+.+.+.++++.+-
T Consensus       242 ~~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~-Da~I~Pl~~l~~~~a~~~~~~~t  297 (322)
T COG3491         242 RWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNF-DAEIAPLLPLCPEAANEPRGPGT  297 (322)
T ss_pred             HHhCCeeccccceeecCCCccceeeeeeccCCC-CccccccCCCCcccccCCcCCCC
Confidence            489999999999999999899999999999996 99999876 44555666676653

>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit

Probab=98.75  E-value=3.1e-09  Score=64.38  Aligned_cols=31  Identities=32%  Similarity=0.641  Sum_probs=21.8

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeec
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMN   31 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P   31 (84)
                      +||||.++++.|||..+....|+|++||++|
T Consensus        68 ~~t~g~~~~~~HrV~~~~~~~R~s~~~f~~p   98 (98)
T PF03171_consen   68 ILTNGRYPATLHRVVPPTEGERYSLTFFLRP   98 (98)
T ss_dssp             HHTTTSS----EEEE--STS-EEEEEEEEE-
T ss_pred             cccCCccCCceeeeEcCCCCCEEEEEEEECC
Confidence            4899999999999999988999999999988

The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	84
1w9y_A	319	The Structure Of Acc Oxidase Length = 319		2e-05

>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELL---SEENPPLYPEIT 57
           +ITN K+KS  HRV+++K+G+R S+ SF+   S +  Y P   L+   +EEN  +YP+  
Sbjct: 223 VITNGKYKSVXHRVIAQKDGARXSLASFYNPGSDAVIY-PAPALVEKEAEENKQVYPKFV 281
Query: 58  LKD 60
             D
Sbjct: 282 FDD 284

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	84
1gp6_A	356	Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep	6e-22
1w9y_A	319	1-aminocyclopropane-1-carboxylate oxidase 1; oxyge	2e-18
3oox_A	312	Putative 2OG-Fe(II) oxygenase family protein; stru	9e-09
1dcs_A	311	Deacetoxycephalosporin C synthase; ferrous oxygena	1e-08
1odm_A	331	Isopenicillin N synthase; antibiotic biosynthesis,	5e-08
3on7_A	280	Oxidoreductase, iron/ascorbate family; structural	2e-04

>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356

 Score = 85.8 bits (213), Expect = 6e-22
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKD 60
           +++N K+KS  HR L  KE  RIS   F           P+ E++S E+P  +P  T   
Sbjct: 277 ILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQ 336

Query: 61  IYNNQSSIEGLSALEKLKLE 80
              ++  + G    E +  +
Sbjct: 337 HIEHK--LFGKEQEELVSEK 354

>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319

 Score = 75.7 bits (187), Expect = 2e-18
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELL---SEENPPLYPEIT 57
           +ITN K+KS  HRV+++K+G+R+S+ SF+ N        P   L+   +EEN  +YP+  
Sbjct: 223 VITNGKYKSVMHRVIAQKDGARMSLASFY-NPGSDAVIYPAPALVEKEAEENKQVYPKFV 281

Query: 58  LKD 60
             D
Sbjct: 282 FDD 284

>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312

 Score = 49.2 bits (118), Expect = 9e-09
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 14/73 (19%)

Query: 3   TNDKFKSAYHRVLS----KKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPE-IT 57
           TN+   S  HRV++    ++   R S   FF++ +   +   ++  ++ ENP  YPE IT
Sbjct: 239 TNNVLPSTVHRVVNPPPERRGVPRYST-PFFLHFASDYEIKTLQNCVTAENPDRYPESIT 297

Query: 58  --------LKDIY 62
                   L++I 
Sbjct: 298 ADEFLQQRLREIK 310

>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311

 Score = 49.3 bits (118), Expect = 1e-08
 Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 12/66 (18%)

Query: 3   TNDKFKSAYHRVLSKKEG-----SRISIESFFMN-N-----SCSRQYGPIKELLSEENPP 51
           T  + K+  H V + +       SR S   FF+  N     S         ++  +    
Sbjct: 234 TGGQVKAPRHHVAAPRRDQIAGSSRTSS-VFFLRPNADFTFSVPLARECGFDVSLDGETA 292

Query: 52  LYPEIT 57
            + +  
Sbjct: 293 TFQDWI 298

>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331

 Score = 47.3 bits (113), Expect = 5e-08
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 13/72 (18%)

Query: 3   TNDKFKSAYHRVL-SKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEIT---- 57
           TN+ +K+  HRV     E  R S+  FF+N        P  +            ++    
Sbjct: 261 TNNYYKAPIHRVKWVNAE--RQSL-PFFVNLGYDSVIDPF-DPREPNGKSDREPLSYGDY 316

Query: 58  ----LKDIYNNQ 65
               L  + N  
Sbjct: 317 LQNGLVSLINKN 328

>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 5/33 (15%)

Query: 3   TNDKFKSAYHRVLS----KKEGSRISIESFFMN 31
           ++  F S  HRV++     K  SRIS+   F++
Sbjct: 222 SDGYFPSTSHRVINPEGTDKTKSRISL-PLFLH 253

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	84
1w9y_A	319	1-aminocyclopropane-1-carboxylate oxidase 1; oxyge	99.86
1gp6_A	356	Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep	99.84
3oox_A	312	Putative 2OG-Fe(II) oxygenase family protein; stru	99.82
1odm_A	331	Isopenicillin N synthase; antibiotic biosynthesis,	99.77
1dcs_A	311	Deacetoxycephalosporin C synthase; ferrous oxygena	99.76
3on7_A	280	Oxidoreductase, iron/ascorbate family; structural	99.51

>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X

Probab=99.86  E-value=6.6e-23  Score=147.22  Aligned_cols=78  Identities=32%  Similarity=0.562  Sum_probs=63.3

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCC---CCCCCCcccHHHH--HHHhhcCCcccc-c
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEE---NPPLYPEITLKDI--YNNQSSIEGLSA-L   74 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~---~p~~y~~~~~~ey--~~~~~~~~~~~~-l   74 (84)
                      +||||+|||++|||+++++++|+|+|||++|+. |++|.|+++|++++   +|++|++++++||  .+....+.++.. +
T Consensus       223 ~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~-d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~  301 (319)
T 1w9y_A          223 VITNGKYKSVMHRVIAQKDGARMSLASFYNPGS-DAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRF  301 (319)
T ss_dssp             HHTTTSSCCCCEEECCCSSSCCEEEEEEEECCT-TCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHH
T ss_pred             HHhCCeeecccceecCCCCCCceEEEEEecCCC-CCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHH
Confidence            599999999999999999999999999999995 99999999999887   5999999999999  334455556554 6


Q ss_pred             ccccc
Q 037672           75 EKLKL   79 (84)
Q Consensus        75 ~~~~~   79 (84)
                      +.+|+
T Consensus       302 ~~~~~  306 (319)
T 1w9y_A          302 EAMKA  306 (319)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77665

>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*

Probab=99.84  E-value=7.8e-22  Score=143.29  Aligned_cols=69  Identities=29%  Similarity=0.406  Sum_probs=61.7

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCC-eeecCccccCCCCCCCCCcccHHHH--HHHhhcCCc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSR-QYGPIKELLSEENPPLYPEITLKDI--YNNQSSIEG   70 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~-~v~pl~~~~~~~~p~~y~~~~~~ey--~~~~~~~~~   70 (84)
                      +||||+|||++|||+++++++|+|+|||++|+. |+ +|+|+++|+++++|++|++++++||  .+...++++
T Consensus       277 ~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~-d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~  348 (356)
T 1gp6_A          277 ILSNGKYKSILHRGLVNKEKVRISWAVFCEPPK-DKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQE  348 (356)
T ss_dssp             HHTTTSSCCCCEEECCCSSCCEEEEEEEEECCT-TTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHH
T ss_pred             HhcCCEeeccCceecCCCCCCEEEEEEeecCCC-CCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhccCc
Confidence            599999999999999999999999999999995 99 9999999999999999999999999  334444444

>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}

Probab=99.82  E-value=6.9e-21  Score=135.94  Aligned_cols=60  Identities=28%  Similarity=0.413  Sum_probs=56.0

Q ss_pred             CeeCCeeecCCceeecCC----CCCceeEEEeeecCCCCCeeecCccccCCCCCCCCC-cccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKK----EGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYP-EITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~----~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~-~~~~~ey   61 (84)
                      +||||+|||+.|||++++    ..+|||+|||++|+. |++|+|+++|+++++|++|+ +++++||
T Consensus       237 ~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~-d~~i~pl~~~v~~~~p~~y~~~~t~~ey  301 (312)
T 3oox_A          237 RLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFAS-DYEIKTLQNCVTAENPDRYPESITADEF  301 (312)
T ss_dssp             HHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCT-TCEECCCGGGCCSSSCCSCSSCEEHHHH
T ss_pred             HHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCC-CcEEecCccccCCCCcccCCCCeeHHHH
Confidence            599999999999998764    567999999999995 99999999999999999999 9999999

>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...

Probab=99.77  E-value=2.6e-19  Score=128.78  Aligned_cols=58  Identities=19%  Similarity=0.196  Sum_probs=54.2

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|||+.|||++ +.++|+|+|||++|+. |++|+|+++++++++ ++|++++++||
T Consensus       259 ~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~-d~~i~pl~~~~~~~~-~~y~~~t~~e~  316 (331)
T 1odm_A          259 HLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGY-DSVIDPFDPREPNGK-SDREPLSYGDY  316 (331)
T ss_dssp             HHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCT-TCBCCCCCTTSTTCC-CSSCCCBHHHH
T ss_pred             HHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCC-CCEEeCCCccccccc-cCCCCccHHHH
Confidence            5999999999999986 4889999999999995 999999999998877 89999999999

>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*

Probab=99.76  E-value=1.3e-19  Score=129.50  Aligned_cols=59  Identities=20%  Similarity=0.198  Sum_probs=55.2

Q ss_pred             CeeCCeeecCCceeecCC-----CCCceeEEEeeecCCCCCeeecCccccCCCCCCCC--CcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKK-----EGSRISIESFFMNNSCSRQYGPIKELLSEENPPLY--PEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~-----~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y--~~~~~~ey   61 (84)
                      +||||+|||+.|||++++     .++|+|+|||++|+. |++|. +++++++++|++|  ++++++||
T Consensus       232 ~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~-d~~i~-l~~~~~~~~p~~y~~~~~t~~ey  297 (311)
T 1dcs_A          232 LVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNA-DFTFS-VPLARECGFDVSLDGETATFQDW  297 (311)
T ss_dssp             HHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCT-TCEEE-HHHHHHTTCCCCCCSSEEEHHHH
T ss_pred             HHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCC-CcEEe-CCcccCCCCccccCCCCccHHHH
Confidence            599999999999999987     789999999999995 99999 9999988899999  99999999

>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}

Probab=99.51  E-value=6.5e-15  Score=103.92  Aligned_cols=46  Identities=26%  Similarity=0.322  Sum_probs=40.8

Q ss_pred             CeeCCeeecCCceeecCC----CCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKK----EGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~----~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|||+.|||++++    .++|||+|||++|+. |++|.|              +++++||
T Consensus       220 ~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~-d~~i~p--------------~ita~~~  269 (280)
T 3on7_A          220 EASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHP-SVVLSE--------------RYTADSY  269 (280)
T ss_dssp             HHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCT-TCBCSS--------------SCBHHHH
T ss_pred             HHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCC-CCEECC--------------CccHHHH
Confidence            599999999999999874    568999999999995 899874              4899999

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	84
d1gp6a_	349	b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr	3e-16
d1w9ya1	307	b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla	5e-12
d1odma_	329	b.82.2.1 (A:) Isopenicillin N synthase {Emericella	6e-08
d1dcsa_	311	b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S	3e-06

>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 69.2 bits (168), Expect = 3e-16
 Identities = 20/59 (33%), Positives = 28/59 (47%)

Query: 2   ITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKD 60
           ++N K+KS  HR L  KE  RIS   F           P+ E++S E+P  +P  T   
Sbjct: 277 LSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQ 335

>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

 Score = 57.2 bits (137), Expect = 5e-12
 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 2   ITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELL---SEENPPLYPEITL 58
           ITN K+KS  HRV+++K+G+R+S+ + F N        P   L+   +EEN  +YP+   
Sbjct: 223 ITNGKYKSVMHRVIAQKDGARMSL-ASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVF 281

Query: 59  KD 60
            D
Sbjct: 282 DD 283

>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Isopenicillin N synthase
species: Emericella nidulans [TaxId: 162425]

 Score = 45.9 bits (107), Expect = 6e-08
 Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 3/60 (5%)

Query: 1   LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKD 60
            +TN+ +K+  HRV       R S+  FF+N        P               ++  D
Sbjct: 257 HLTNNYYKAPIHRVKW-VNAERQSL-PFFVNLGYDSVIDPFDP-REPNGKSDREPLSYGD 313

>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Deacetoxycephalosporin C synthase
species: Streptomyces clavuligerus [TaxId: 1901]

 Score = 41.1 bits (95), Expect = 3e-06
 Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 5/66 (7%)

Query: 1   LITNDKFKSAYHRVLSKKEG-----SRISIESFFMNNSCSRQYGPIKELLSEENPPLYPE 55
           L+T  + K+  H V + +       SR S   F   N+      P+      +       
Sbjct: 232 LVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFSVPLARECGFDVSLDGET 291

Query: 56  ITLKDI 61
            T +D 
Sbjct: 292 ATFQDW 297

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	84
d1w9ya1	307	1-aminocyclopropane-1-carboxylate oxidase 1 {Petun	99.88
d1gp6a_	349	Anthocyanidin synthase {Mouse-ear cress (Arabidops	99.85
d1odma_	329	Isopenicillin N synthase {Emericella nidulans [Tax	99.75
d1dcsa_	311	Deacetoxycephalosporin C synthase {Streptomyces cl	99.6

>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=99.88  E-value=8.3e-24  Score=147.94  Aligned_cols=77  Identities=34%  Similarity=0.572  Sum_probs=62.5

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccC---CCCCCCCCcccHHHH-H-HHhhcCCccc-cc
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLS---EENPPLYPEITLKDI-Y-NNQSSIEGLS-AL   74 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~---~~~p~~y~~~~~~ey-~-~~~~~~~~~~-~l   74 (84)
                      +||||+||||.|||+.+++++|||||||++|+. |++|+|+|+|++   +++|++|++++++|| . +.+.+++++. .|
T Consensus       222 ~~Tng~~kSt~HRVv~~~~~~R~Si~~F~~p~~-d~~i~p~~~~v~~~~~~~p~~y~~~t~~ey~~~~~~~~~~~~~~~~  300 (307)
T d1w9ya1         222 VITNGKYKSVMHRVIAQKDGARMSLASFYNPGS-DAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRF  300 (307)
T ss_dssp             HHTTTSSCCCCEEECCCSSSCCEEEEEEEECCT-TCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHH
T ss_pred             HhhCCcccCcCceeecCCCCCcEEEEEEeeCCC-CCEEeCCHHHhcccCccCCCCCCCeeHHHHHHHHHhccCCcccHHH
Confidence            599999999999999999999999999999995 999999999986   467899999999999 3 3444666544 47


Q ss_pred             cccc
Q 037672           75 EKLK   78 (84)
Q Consensus        75 ~~~~   78 (84)
                      +.+|
T Consensus       301 ~~~~  304 (307)
T d1w9ya1         301 EAMK  304 (307)
T ss_dssp             HHHH
T ss_pred             HHhh
Confidence            7665

>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.85  E-value=3.4e-22  Score=140.90  Aligned_cols=60  Identities=33%  Similarity=0.511  Sum_probs=56.6

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCe-eecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQ-YGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~-v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|||++|||+.+++++|||+|||++|+. |++ ++|+|+|+++++|++|++++++||
T Consensus       276 ~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~-d~~i~~pl~~~v~~~~p~~y~~~t~~e~  336 (349)
T d1gp6a_         276 ILSNGKYKSILHRGLVNKEKVRISWAVFCEPPK-DKIVLKPLPEMVSVESPAKFPPRTFAQH  336 (349)
T ss_dssp             HHTTTSSCCCCEEECCCSSCCEEEEEEEEECCT-TTCEECCCGGGCCSSSCCSSCCEEHHHH
T ss_pred             HHhCCCccCcCccccCCCCCCeEEEEEEecCCC-cceeecCCHHHcCCCCCCCCCCccHHHH
Confidence            499999999999999999999999999999995 765 599999999999999999999999

>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Isopenicillin N synthase
species: Emericella nidulans [TaxId: 162425]

Probab=99.75  E-value=2.5e-19  Score=125.35  Aligned_cols=58  Identities=19%  Similarity=0.194  Sum_probs=51.9

Q ss_pred             CeeCCeeecCCceeecCCCCCceeEEEeeecCCCCCeeecCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKKEGSRISIESFFMNNSCSRQYGPIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~v~pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|||++|||+.+ ..+|||+|||++|+. |++|.|++++..+ .++.|++++++||
T Consensus       257 ~~Tng~~kst~HRV~~~-~~~R~Si~~F~~P~~-d~~i~pl~~~~~~-~~~~~~~~~~~e~  314 (329)
T d1odma_         257 HLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGY-DSVIDPFDPREPN-GKSDREPLSYGDY  314 (329)
T ss_dssp             HHTTTSSCCCCEEEECC-CSCEEEEEEEECCCT-TCBCCCCCTTSTT-CCCSSCCCBHHHH
T ss_pred             HHhCCEecCCCceecCC-CCCEEEEEEEECCCC-CCEEeCCcccCCC-CcccCCCccHHHH
Confidence            49999999999999876 578999999999995 9999999988554 5678999999999

>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Deacetoxycephalosporin C synthase
species: Streptomyces clavuligerus [TaxId: 1901]

Probab=99.60  E-value=1.5e-16  Score=111.49  Aligned_cols=60  Identities=22%  Similarity=0.240  Sum_probs=49.9

Q ss_pred             CeeCCeeecCCceeecCC-----CCCceeEEEeeecCCCCCeee-cCccccCCCCCCCCCcccHHHH
Q 037672            1 LITNDKFKSAYHRVLSKK-----EGSRISIESFFMNNSCSRQYG-PIKELLSEENPPLYPEITLKDI   61 (84)
Q Consensus         1 i~SNG~~kS~~HRVv~~~-----~~~R~Sia~F~~P~~~d~~v~-pl~~~~~~~~p~~y~~~~~~ey   61 (84)
                      +||||+|+|++|||++|+     .++|||+|||++|+. |++|. |+.+..+.+.+..+++.+|++|
T Consensus       232 ~~TnG~~~S~~HRVv~p~~~~~~~~~R~Si~~F~~P~~-d~~i~pP~~~~~~~~~~~~~~~~~~~~~  297 (311)
T d1dcsa_         232 LVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNA-DFTFSVPLARECGFDVSLDGETATFQDW  297 (311)
T ss_dssp             HHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCT-TCEEEHHHHHHTTCCCCCCSSEEEHHHH
T ss_pred             HHhCCEecCCCceEeCCccccCCCCCEEEEEEEEcCCC-CCEECCCcccccccCCCCCCCCCCHHHH
Confidence            599999999999999974     368999999999995 99998 5566566566677888888888