Citrus Sinensis ID: 037898


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------
ILLLLPAGSYSAQLPQSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVKGFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQDAVIRALLYEKANETVKPYGVTVAEFTNKMSQLRNVLGRTGIKDEGLVVPELQGAEGKIAGNVLAGDENSVAFDRNPEEILSIVYGSGDEHVPGGFYPKGADGRIARSHLHTA
cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHcccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEccccccccccccHHHHHHHHHccccccccccccccccccHHcccccccc
cEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcHEEHccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccccccEEEccccccccccEEEEEEcccccccccccHHHHHHHEEccccccccccccccccccHHHHHHHHcc
illllpagsysaqlpqsdidllefplnLEYLEAEFFLFGslgygldkvapnltmggpapiggkkanldAFANDVVLQFAWQEVGHLKAIKKTvkgfprplldlsagTFAKVMdkafgkplnppfdpyanSINYLIASYLipyvgltgyvganprlqdaTSKRLVAGLLGVESGQDAVIRALLYEKANETVKPYGVTVAEFTNKMSQLRNVLGrtgikdeglvvpelqgaegkiagnvlagdensvafdrnpEEILSIVygsgdehvpggfypkgadgriarshlhta
illllpagsysaqlpqSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVKGFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQDAVIRALLYEKANETVKPYGVTVAEFTNKMSQLRNVLGRTGIKDEGLVVPELQGAEGKIAGNVLAGDENSVAFDRNPEEILSIVYGSGDEHVPGGFYPKGADGRIARSHLHTA
ILLLLPAGSYSAQLPQSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVKGFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQDAVIRALLYEKANETVKPYGVTVAEFTNKMSQLRNVLGRTGIKDEGLVVPELQGAEGKIAGNVLAGDENSVAFDRNPEEILSIVYGSGDEHVPGGFYPKGADGRIARSHLHTA
*************LPQSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVKGFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQDAVIRALLYEKANETVKPYGVTVAEFTNKMSQLRNVLGRTGIKDEGLVVPELQGAEGKIAGNVLAGDENSVAFDRNPEEILSIVYGSGDEHVPGGFY****************
ILL******Y****PQSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVKGFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQDAVIRALLYEKANETVKPYGVTVAEFTNKMSQLRNVLGRTGIKDEGLVVPELQGAEGKIAGNVLAGDENSVAFDRNPEEILSIVYGSGDEHVPGGFYPKGADGRIARSHL***
ILLLLPAGSYSAQLPQSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVKGFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQDAVIRALLYEKANETVKPYGVTVAEFTNKMSQLRNVLGRTGIKDEGLVVPELQGAEGKIAGNVLAGDENSVAFDRNPEEILSIVYGSGDEHVPGGFYPKGADGRIARSHLHTA
ILLLLPAGSYSAQLPQSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVKGFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQDAVIRALLYEKANETVKPYGVTVAEFTNKMSQLRNVLGRTGIKDEGLVVPELQGAEGKIAGNVLAGDENSVAFDRNPEEILSIVYGSGDEHVPGGFYPKGADGRIARSHLHTA
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ILLLLPAGSYSAQLPQSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVKGFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQDAVIRALLYEKANETVKPYGVTVAEFTNKMSQLRNVLGRTGIKDEGLVVPELQGAEGKIAGNVLAGDENSVAFDRNPEEILSIVYGSGDEHVPGGFYPKGADGRIARSHLHTA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query287 2.2.26 [Sep-21-2011]
P22242313 Desiccation-related prote N/A no 0.961 0.881 0.609 1e-96
>sp|P22242|DRPE_CRAPL Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum PE=2 SV=1 Back     alignment and function desciption
 Score =  352 bits (904), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 173/284 (60%), Positives = 217/284 (76%), Gaps = 8/284 (2%)

Query: 2   LLLLPAGSYSA------QLPQSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMG 55
           L L+ + SY+A       +P+SD+ LLEFPLNLE LEAEFF + + G G+D++ P L  G
Sbjct: 17  LALICSCSYAAWHHEKDDIPKSDVSLLEFPLNLELLEAEFFAWAAFGKGIDELEPELAKG 76

Query: 56  GPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVKGFPRPLLDLSAGTFAKVMDKA 115
           GP+PIG +KANL  F  D++ QFA+QE GH++AI+ +V+GFPRPLLDLSA +FA VMD A
Sbjct: 77  GPSPIGVQKANLSPFIRDIIAQFAYQEFGHVRAIQSSVEGFPRPLLDLSAKSFATVMDSA 136

Query: 116 FGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQD 175
           FGK L PPFDPYAN INYL+A Y++PYVGLTGYVGANP+L+   S++LVAGLL VE+GQD
Sbjct: 137 FGKTLKPPFDPYANDINYLLACYVVPYVGLTGYVGANPKLESPVSRKLVAGLLAVEAGQD 196

Query: 176 AVIRALLYEKANETVKPYGVTVAEFTNKMSQLRNVLGRTGIKDEGLVV-PELQGAEGKIA 234
           A+IRALLYE+A + V+PYG+TVAEFTNK+S+LRN LG  G+KD GL+V PEL GAEGKI+
Sbjct: 197 AIIRALLYERATDKVEPYGITVAEFTNKISELRNKLGDKGVKDLGLIVEPEL-GAEGKIS 255

Query: 235 GNVLAGDENSVAFDRNPEEILSIVYGSGDEHVPGGFYPKGADGR 278
           GNVLAGD+NS+AF R PE  L     +     P  F PK   G+
Sbjct: 256 GNVLAGDKNSLAFPRTPERCLGSCTAAAMRPSPAAFIPKAPTGK 299





Craterostigma plantagineum (taxid: 4153)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query287
224099099313 predicted protein [Populus trichocarpa] 0.993 0.910 0.727 1e-118
449462134310 PREDICTED: desiccation-related protein P 0.951 0.880 0.750 1e-118
356529093313 PREDICTED: desiccation-related protein P 0.965 0.884 0.743 1e-118
356555981314 PREDICTED: desiccation-related protein P 0.954 0.872 0.729 1e-114
297852412315 hypothetical protein ARALYDRAFT_891606 [ 0.961 0.876 0.731 1e-114
21593191315 dessication-related protein, putative [A 0.961 0.876 0.728 1e-114
18401988315 uncharacterized protein [Arabidopsis tha 0.961 0.876 0.728 1e-113
12323093302 dessication-related protein, putative; 7 0.961 0.913 0.728 1e-113
296083215 474 unnamed protein product [Vitis vinifera] 0.996 0.603 0.703 1e-112
359477103303 PREDICTED: desiccation-related protein P 0.996 0.943 0.703 1e-112
>gi|224099099|ref|XP_002311374.1| predicted protein [Populus trichocarpa] gi|222851194|gb|EEE88741.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/294 (72%), Positives = 243/294 (82%), Gaps = 9/294 (3%)

Query: 1   ILLLLPA---------GSYSAQLPQSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPN 51
           ILLL+P          GS  + +PQSDIDLLEFPLNLEYLEAEFFL+GS+G GLD  APN
Sbjct: 18  ILLLVPISCSSPFITDGSRDSPIPQSDIDLLEFPLNLEYLEAEFFLYGSMGQGLDNFAPN 77

Query: 52  LTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVKGFPRPLLDLSAGTFAKV 111
           LTMGGP P+G KKANLD +  DV+ QFAWQEVGHL+AIK TV+GFPRPLLDLS  +FAK 
Sbjct: 78  LTMGGPKPLGAKKANLDPYTRDVIKQFAWQEVGHLRAIKDTVQGFPRPLLDLSTKSFAKT 137

Query: 112 MDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVE 171
           MD AFGK L+PPFDPYA+S++YLIASY+IPYVGLTGYVGANP+LQ A SKRLVAGLL VE
Sbjct: 138 MDAAFGKRLSPPFDPYASSLHYLIASYVIPYVGLTGYVGANPKLQAAASKRLVAGLLAVE 197

Query: 172 SGQDAVIRALLYEKANETVKPYGVTVAEFTNKMSQLRNVLGRTGIKDEGLVVPELQGAEG 231
           SGQDAVIR LLYE A   + PYG+TVAEFTN++S LRN LG+ GIKDEGLVVP+  GAEG
Sbjct: 198 SGQDAVIRGLLYEYALIRLHPYGITVAEFTNRISDLRNKLGQEGIKDEGLVVPKKFGAEG 257

Query: 232 KIAGNVLAGDENSVAFDRNPEEILSIVYGSGDEHVPGGFYPKGADGRIARSHLH 285
           +I GNVLAGDE S+ + R PEEIL +VYGSG+E  PGGFYPKGADGRIA+SHL 
Sbjct: 258 QIRGNVLAGDEYSIGYARTPEEILRVVYGSGNESTPGGFYPKGADGRIAKSHLQ 311




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462134|ref|XP_004148796.1| PREDICTED: desiccation-related protein PCC13-62-like [Cucumis sativus] gi|449511873|ref|XP_004164077.1| PREDICTED: desiccation-related protein PCC13-62-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356529093|ref|XP_003533131.1| PREDICTED: desiccation-related protein PCC13-62-like [Glycine max] Back     alignment and taxonomy information
>gi|356555981|ref|XP_003546306.1| PREDICTED: desiccation-related protein PCC13-62-like [Glycine max] Back     alignment and taxonomy information
>gi|297852412|ref|XP_002894087.1| hypothetical protein ARALYDRAFT_891606 [Arabidopsis lyrata subsp. lyrata] gi|297339929|gb|EFH70346.1| hypothetical protein ARALYDRAFT_891606 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21593191|gb|AAM65140.1| dessication-related protein, putative [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18401988|ref|NP_564518.1| uncharacterized protein [Arabidopsis thaliana] gi|332194113|gb|AEE32234.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|12323093|gb|AAG51530.1|AC051631_10 dessication-related protein, putative; 70055-71849 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|296083215|emb|CBI22851.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477103|ref|XP_002273659.2| PREDICTED: desiccation-related protein PCC13-62-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query287
TAIR|locus:2202593315 AT1G47980 "AT1G47980" [Arabido 0.937 0.853 0.747 1.9e-106
TAIR|locus:2081645317 AT3G62730 "AT3G62730" [Arabido 0.961 0.870 0.584 1.2e-81
TAIR|locus:2202593 AT1G47980 "AT1G47980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
 Identities = 201/269 (74%), Positives = 228/269 (84%)

Query:    18 DIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQ 77
             D  LLEFPLNLEYLEAEFFLFG+LG GLDKVAPNLTMGGP+PIG +KANLD    D++LQ
Sbjct:    43 DRKLLEFPLNLEYLEAEFFLFGALGLGLDKVAPNLTMGGPSPIGAQKANLDPLTRDIILQ 102

Query:    78 FAWQEVGHLKAIKKTVKGFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIAS 137
             FAWQEVGHL+AIKKTVKGF RP LDLS   FAKVMDKAFG    PPF+PYANS NYLIAS
Sbjct:   103 FAWQEVGHLRAIKKTVKGFARPQLDLSKKAFAKVMDKAFGVKFVPPFNPYANSYNYLIAS 162

Query:   138 YLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQDAVIRALLYEKANETVKPYGVTV 197
             YL+PYVGLTGYVGANP+LQ   S++LVAGLLGVESGQDAVIR +LY +A   V PYGVTV
Sbjct:   163 YLVPYVGLTGYVGANPKLQCPASRKLVAGLLGVESGQDAVIRGMLYARAAHIVYPYGVTV 222

Query:   198 AEFTNKMSQLRNVLGRTGIKDEGLVVPELQGAEGKIAGNVLAGDENSVAFDRNPEEILSI 257
             A FT+K+S LRN LG+ G+KDEGL+VP+  GAEG++ GNVL G+E S++FDR PEEIL I
Sbjct:   223 AAFTDKISDLRNKLGKAGVKDEGLIVPKFMGAEGQVIGNVLVGNELSLSFDRTPEEILRI 282

Query:   258 VYGSGDEHVPGGFYPKGADGRIARSHLHT 286
             VYGSG+E VPGGFYPKGADG IA+S+L T
Sbjct:   283 VYGSGNESVPGGFYPKGADGEIAKSYLVT 311




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2081645 AT3G62730 "AT3G62730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P22242DRPE_CRAPLNo assigned EC number0.60910.96160.8817N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.VIII.834.1
hypothetical protein (267 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query287
pfam13668137 pfam13668, Ferritin_2, Ferritin-like domain 9e-45
>gnl|CDD|222304 pfam13668, Ferritin_2, Ferritin-like domain Back     alignment and domain information
 Score =  147 bits (374), Expect = 9e-45
 Identities = 57/170 (33%), Positives = 81/170 (47%), Gaps = 35/170 (20%)

Query: 17  SDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVL 76
           SD+D+L F L LEYLEA F+L    G+GLD                 KA LDA    +  
Sbjct: 1   SDVDILNFALTLEYLEAAFYLQALAGFGLD--------------DFAKAGLDAAVRALAE 46

Query: 77  QFAWQEVGHLKAIKKTV--KGFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYL 134
           + A  EV H++ +K  +     PRP  D                    PFDP+ + +++L
Sbjct: 47  EIADHEVAHVRFLKAALGGAPVPRPTFDF-------------------PFDPFTDRLSFL 87

Query: 135 IASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQDAVIRALLYE 184
             +Y++  VG++ Y+GA P L +       A +LGVE+   AVIR LL E
Sbjct: 88  ALAYVLEDVGVSAYLGAAPLLSNKDYLAAAASILGVEARHAAVIRTLLGE 137


This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins. Length = 137

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 287
PF13668137 Ferritin_2: Ferritin-like domain 100.0
cd01045139 Ferritin_like_AB Uncharacterized family of ferriti 98.5
cd00657130 Ferritin_like Ferritin-like superfamily of diiron- 98.4
PF02915137 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru 97.74
cd01048135 Ferritin_like_AB2 Uncharacterized family of ferrit 97.63
COG1633176 Uncharacterized conserved protein [Function unknow 96.94
cd07908154 Mn_catalase_like Manganese catalase-like protein, 96.71
PRK127751006 putative trifunctional 2-polyprenylphenol hydroxyl 96.59
PRK13456186 DNA protection protein DPS; Provisional 96.41
cd01044125 Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin 96.18
cd01052148 DPSL DPS-like protein, ferritin-like diiron-bindin 95.71
cd00907153 Bacterioferritin Bacterioferritin, ferritin-like d 95.39
PF13668137 Ferritin_2: Ferritin-like domain 95.08
cd07908154 Mn_catalase_like Manganese catalase-like protein, 93.54
cd01045139 Ferritin_like_AB Uncharacterized family of ferriti 93.25
cd01051156 Mn_catalase Manganese catalase, ferritin-like diir 93.14
PRK10635158 bacterioferritin; Provisional 91.35
PF02915137 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru 88.43
cd01041134 Rubrerythrin Rubrerythrin, ferritin-like diiron-bi 88.4
TIGR02284139 conserved hypothetical protein. Members of this pr 87.87
cd00657130 Ferritin_like Ferritin-like superfamily of diiron- 86.32
PF09968162 DUF2202: Uncharacterized protein domain (DUF2202); 85.63
TIGR00754157 bfr bacterioferritin. Bacterioferritin is a homomu 82.3
>PF13668 Ferritin_2: Ferritin-like domain Back     alignment and domain information
Probab=100.00  E-value=1.4e-33  Score=234.43  Aligned_cols=134  Identities=39%  Similarity=0.685  Sum_probs=125.1

Q ss_pred             CchhhhhhhHhHHHHHHHHHHhhhhCCCccccCCcccCCCCCCCCCccCCCCHHHHHHHHHHHHhHHHHHHHHHHhh-c-
Q 037898           17 SDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTV-K-   94 (287)
Q Consensus        17 ~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~~~~~~~eia~~E~~HV~~L~~aL-g-   94 (287)
                      +|++||||||+|||||.+||.+++.+++.++ .              +..+++.+++++++|+.||..|+++|+++| | 
T Consensus         1 ~D~~iL~~Al~lE~l~~~fY~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~i~~~E~~H~~~l~~~l~g~   65 (137)
T PF13668_consen    1 GDLDILNFALNLEYLEADFYQQAAEGFTLQD-N--------------KAALDPEVRDLFQEIADQEQGHVDFLQAALEGG   65 (137)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhcCChhh-h--------------hccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            6999999999999999999999998877653 1              355789999999999999999999999999 6 


Q ss_pred             -CCCCccccCCcchHHHHHHHhcCCCCCCCCCCCCChHHHHHHHhhccchhHHhhccccccCCChhHHHHHHhHHHhhhh
Q 037898           95 -GFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESG  173 (287)
Q Consensus        95 -av~~P~id~s~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~~~E~VGvtAY~Gaap~l~~~~~l~aAa~Il~VEA~  173 (287)
                       ++++|.+|+                   +||||+|+.+||..|+.||++|+++|+|++++++|++++.++++|++||++
T Consensus        66 ~~~~~~~~~~-------------------~~~~~~~~~~~L~~A~~~E~~~~~~Y~g~~~~~~~~~~~~~~~~i~~~Ea~  126 (137)
T PF13668_consen   66 RPVPPPAYDF-------------------PFDPFTDDASFLRLAYTLEDVGVSAYKGAAPQIEDPELKALAASIAGVEAR  126 (137)
T ss_pred             CCCCCCcccc-------------------ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence             788898887                   489999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHh
Q 037898          174 QDAVIRALLYE  184 (287)
Q Consensus       174 Haa~IR~lL~~  184 (287)
                      |++|||++|+|
T Consensus       127 H~~~ir~ll~~  137 (137)
T PF13668_consen  127 HAAWIRNLLGQ  137 (137)
T ss_pred             HHHHHHHHhcC
Confidence            99999999985



>cd01045 Ferritin_like_AB Uncharacterized family of ferritin-like proteins found in archaea and bacteria Back     alignment and domain information
>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins Back     alignment and domain information
>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin [] Back     alignment and domain information
>cd01048 Ferritin_like_AB2 Uncharacterized family of ferritin-like proteins found in archaea and bacteria Back     alignment and domain information
>COG1633 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd07908 Mn_catalase_like Manganese catalase-like protein, ferritin-like diiron-binding domain Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>PRK13456 DNA protection protein DPS; Provisional Back     alignment and domain information
>cd01044 Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin-like diiron-binding domain Back     alignment and domain information
>cd01052 DPSL DPS-like protein, ferritin-like diiron-binding domain Back     alignment and domain information
>cd00907 Bacterioferritin Bacterioferritin, ferritin-like diiron-binding domain Back     alignment and domain information
>PF13668 Ferritin_2: Ferritin-like domain Back     alignment and domain information
>cd07908 Mn_catalase_like Manganese catalase-like protein, ferritin-like diiron-binding domain Back     alignment and domain information
>cd01045 Ferritin_like_AB Uncharacterized family of ferritin-like proteins found in archaea and bacteria Back     alignment and domain information
>cd01051 Mn_catalase Manganese catalase, ferritin-like diiron-binding domain Back     alignment and domain information
>PRK10635 bacterioferritin; Provisional Back     alignment and domain information
>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin [] Back     alignment and domain information
>cd01041 Rubrerythrin Rubrerythrin, ferritin-like diiron-binding domain Back     alignment and domain information
>TIGR02284 conserved hypothetical protein Back     alignment and domain information
>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins Back     alignment and domain information
>PF09968 DUF2202: Uncharacterized protein domain (DUF2202); InterPro: IPR019243 This domain, found in various hypothetical archaeal proteins, has no known function Back     alignment and domain information
>TIGR00754 bfr bacterioferritin Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query287
2ib0_A170 Conserved hypothetical alanine rich protein; 4-hel 98.12
2oh3_A167 Rubrerythrin, COG1633: uncharacterized conserved p 97.97
2fzf_A175 Hypothetical protein; structural genomics, southea 97.81
1vjx_A157 Putative ferritin-like DIIRON-carboxylate protein; 97.75
2qqy_A149 Sigma B operon; dodecameric alpha-helical, ferriti 96.74
3fse_A365 Two-domain protein containing DJ-1/THIJ/PFPI-like 96.51
3q4o_A196 Uncharacterized protein MJ0754; ferritin-like prot 96.28
3gvy_A161 Bacterioferritin; iron storage, DI-iron, ferroxida 96.18
4etr_A153 Putative uncharacterized protein; DUF2383, domain 95.97
1nfv_A179 Bacterioferritin; 24 subunits in the active molecu 95.83
1jgc_A161 Bacterioferritin, BFR; iron storage protein, metal 95.75
3r2k_A154 Bacterioferritin, BFR; bacterial ferritin, iron bi 95.66
2fkz_A155 Bacterioferritin; ferroxidase, DIIRON site, iron T 95.4
2y3q_A158 Bacterioferritin; metal binding protein, redox; HE 95.19
3uoi_A161 Bacterioferritin, BFR; structural genomics, TB str 95.01
3qb9_A174 Bacterioferritin, BFR; cytosol, structural genomic 94.84
1j30_A144 144AA long hypothetical rubrerythrin; sulerythrin, 94.62
2oh3_A167 Rubrerythrin, COG1633: uncharacterized conserved p 94.26
4am5_A159 Bacterioferritin; metal binding protein, ferroxida 94.18
3fvb_A182 Bacterioferritin; niaid, ssgcid, decode, structura 93.5
1vjx_A157 Putative ferritin-like DIIRON-carboxylate protein; 93.03
2vzb_A170 Putative bacterioferritin-related protein; DPS, DP 92.11
2fzf_A175 Hypothetical protein; structural genomics, southea 91.1
4di0_A144 Rubrerythrin; ssgcid, seattle structural genomics 88.4
1lko_A191 Rubrerythrin all-iron(II) form; reduced form, DIIR 87.15
1ji5_A142 DLP-1; dodecamer, four-helix bundle, metal transpo 85.69
1n1q_A149 DPS protein; four-helix bundle, unknown function; 84.99
2jd6_0174 Ferritin homolog, ferritin; metal transport, iron, 83.18
1jig_A146 DLP-2; dodecamer, four-helix bundle, metal transpo 81.45
1krq_A167 Ferritin; H-chain like four-helix bundle, binding 81.13
3oj5_A189 Ferritin family protein; ferroxidase, cytosol, oxi 80.76
>2ib0_A Conserved hypothetical alanine rich protein; 4-helix bundle, structural genomics, PSI-2, protein structur initiative; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.9 Back     alignment and structure
Probab=98.12  E-value=1.9e-05  Score=68.65  Aligned_cols=127  Identities=13%  Similarity=0.027  Sum_probs=104.3

Q ss_pred             CCchhhhhhhHhHHHHHHHHHHhhhhCCCccccCCcccCCCCCCCCCccCCCCHHHHHHHHHHHHhHHHHHHHHHHhhc-
Q 037898           16 QSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVK-   94 (287)
Q Consensus        16 ~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~~~~~~~eia~~E~~HV~~L~~aLg-   94 (287)
                      ..|+++||-||..||--  -|-+++-                      .+.+++.+++.+.+...+...|...|+.+|. 
T Consensus        20 ~~d~~aL~~ALaaEhaA--IyaYGv~----------------------~a~l~~~~~~~a~~~~~~HrarRD~L~~~l~~   75 (170)
T 2ib0_A           20 SADNAALCDALAVEHAT--IYGYGIV----------------------SALSPPGVNFLVADALKQHRHRRDDVIVMLSA   75 (170)
T ss_dssp             HHHHHHHHHHHHHHHHH--HHHHHHH----------------------HHHSCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHH--HHHHHHH----------------------HhccChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45789999999999943  3333332                      1346678899999999999999999999986 


Q ss_pred             --CC---CCccccCCcchHHHHHHHhcCCCCCCCCCCCCChHHHHHHHhhccchhHHhhccccccCCChhHHHHHHhHHH
Q 037898           95 --GF---PRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLG  169 (287)
Q Consensus        95 --av---~~P~id~s~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~~~E~VGvtAY~Gaap~l~~~~~l~aAa~Il~  169 (287)
                        +.   ++|.|++                   ||+ ..|..+-+..+..+|.=...+|.+..+...+++.++.|+++|+
T Consensus        76 ~G~~pp~a~aaY~l-------------------P~~-v~d~asa~~lAa~lE~~~A~ay~~~v~~a~~~~~R~~A~~aL~  135 (170)
T 2ib0_A           76 RGVTAPIAAAGYQL-------------------PMQ-VSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALT  135 (170)
T ss_dssp             TTCCCCCCCSSCCC-------------------SSC-CCSHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHH
T ss_pred             cCCCCCCCcCcCCC-------------------CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence              22   2333433                   454 5888999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHhhh
Q 037898          170 VESGQDAVIRALLYEKA  186 (287)
Q Consensus       170 VEA~Haa~IR~lL~~~~  186 (287)
                      .+|.|+...|..+.+..
T Consensus       136 ~aAvr~a~wr~alG~~P  152 (170)
T 2ib0_A          136 ESAVMATRWNRVLGAWP  152 (170)
T ss_dssp             HHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHhcCCCC
Confidence            99999999999998865



>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8 Back     alignment and structure
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1 Back     alignment and structure
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1 Back     alignment and structure
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str} Back     alignment and structure
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3q4o_A Uncharacterized protein MJ0754; ferritin-like protein, four-helix bundle, metal binding, DIN center, unknown function; HET: B3P; 1.34A {Methanocaldococcus jannaschii} PDB: 3q4q_A* 3q4r_A* 3q4n_A Back     alignment and structure
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1 Back     alignment and structure
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa} Back     alignment and structure
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A* Back     alignment and structure
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1 Back     alignment and structure
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A Back     alignment and structure
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A* Back     alignment and structure
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A* Back     alignment and structure
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A* Back     alignment and structure
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A* Back     alignment and structure
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1 Back     alignment and structure
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8 Back     alignment and structure
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A* Back     alignment and structure
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308} Back     alignment and structure
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1 Back     alignment and structure
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis} Back     alignment and structure
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1 Back     alignment and structure
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A Back     alignment and structure
>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1 Back     alignment and structure
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1 Back     alignment and structure
>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0 Back     alignment and structure
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1 Back     alignment and structure
>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1 Back     alignment and structure
>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query287
d2ib0a1142 Hypothetical protein Rv2844 {Mycobacterium tubercu 99.75
d2fzfa1158 Hypothetical protein PF1190 {Archaeon Pyrococcus f 98.66
d2oh3a1152 Uncharacterized protein AMB4284 homologue {Magneto 98.65
d1vjxa_149 Hypothetical protein TM1526 {Thermotoga maritima [ 98.46
d2oh3a1152 Uncharacterized protein AMB4284 homologue {Magneto 96.68
d1nf4a_169 Bacterioferritin (cytochrome b1) {Desulfovibrio de 96.61
d2fkza1154 Bacterioferritin (cytochrome b1) {Azotobacter vine 96.33
d1jgca_160 Bacterioferritin (cytochrome b1) {Rhodobacter caps 95.68
d2htna1158 Bacterioferritin (cytochrome b1) {Escherichia coli 95.63
d1lkoa1146 Rubrerythrin, N-terminal domain {Desulfovibrio vul 95.51
d2ib0a1142 Hypothetical protein Rv2844 {Mycobacterium tubercu 94.75
d1vjxa_149 Hypothetical protein TM1526 {Thermotoga maritima [ 94.56
d2fzfa1158 Hypothetical protein PF1190 {Archaeon Pyrococcus f 93.38
d1yuza1135 Nigerythrin, N-terminal domain {Desulfovibrio vulg 92.31
d1j30a_141 Hypothetical rubrerythrin {Archaeon Sulfolobus tok 89.42
>d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Rv2844-like
domain: Hypothetical protein Rv2844
species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.75  E-value=1.3e-18  Score=142.53  Aligned_cols=132  Identities=12%  Similarity=-0.009  Sum_probs=108.4

Q ss_pred             CCchhhhhhhHhHHHHHHHHHHhhhhCCCccccCCcccCCCCCCCCCccCCCCHHHHHHHHHHHHhHHHHHHHHHHhhc-
Q 037898           16 QSDIDLLEFPLNLEYLEAEFFLFGSLGYGLDKVAPNLTMGGPAPIGGKKANLDAFANDVVLQFAWQEVGHLKAIKKTVK-   94 (287)
Q Consensus        16 ~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~~~~~~~eia~~E~~HV~~L~~aLg-   94 (287)
                      .+|.++||+||.+||  +.+|.+++..                      ..+++.+++++++++.||..|+..|++.+. 
T Consensus         4 ~~d~~~L~~AL~~E~--aaiy~Y~~a~----------------------~~~~~~~~~~~~~~~~~e~~H~~~L~~~i~~   59 (142)
T d2ib0a1           4 SADNAALCDALAVEH--ATIYGYGIVS----------------------ALSPPGVNFLVADALKQHRHRRDDVIVMLSA   59 (142)
T ss_dssp             HHHHHHHHHHHHHHH--HHHHHHHHHH----------------------HHSCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHH--HHHHHHHHHh----------------------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            469999999999999  5588876532                      224577899999999999999999999886 


Q ss_pred             CCCCccccCCcchHHHHHHHhcCCCCCCCCCCCCChHHHHHHHhhccchhHHhhccccccCCChhHHHHHHhHHHhhhhh
Q 037898           95 GFPRPLLDLSAGTFAKVMDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPRLQDATSKRLVAGLLGVESGQ  174 (287)
Q Consensus        95 av~~P~id~s~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~~~E~VGvtAY~Gaap~l~~~~~l~aAa~Il~VEA~H  174 (287)
                      ....|.....            ++.   .-++++|..++|..+..+|..++.+|.+++..++|+++++++++||++||+|
T Consensus        60 lgg~p~~~~~------------~~~---~~~~~td~~~~l~~a~~~E~~a~~~Y~~~~~~~~d~~~r~la~~il~~ea~h  124 (142)
T d2ib0a1          60 RGVTAPIAAA------------GYQ---LPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVM  124 (142)
T ss_dssp             TTCCCCCCCS------------SCC---CSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCcccc------------ccc---cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            2233332211            111   1246789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhh
Q 037898          175 DAVIRALLYEKA  186 (287)
Q Consensus       175 aa~IR~lL~~~~  186 (287)
                      ++++|..+....
T Consensus       125 a~~~r~~~~~~p  136 (142)
T d2ib0a1         125 ATRWNRVLGAWP  136 (142)
T ss_dssp             HHHHHHHHHHSC
T ss_pred             HHHHHHhcCCCC
Confidence            999999998764



>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]} Back     information, alignment and structure
>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]} Back     information, alignment and structure
>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]} Back     information, alignment and structure
>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1jgca_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]} Back     information, alignment and structure
>d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]} Back     information, alignment and structure
>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure