Citrus Sinensis ID: 037949
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 243 | 2.2.26 [Sep-21-2011] | |||||||
| P35007 | 485 | Adenosylhomocysteinase OS | N/A | no | 0.991 | 0.496 | 0.666 | 3e-95 | |
| P32112 | 485 | Adenosylhomocysteinase OS | N/A | no | 0.991 | 0.496 | 0.655 | 1e-94 | |
| O23255 | 485 | Adenosylhomocysteinase 1 | no | no | 0.979 | 0.490 | 0.655 | 1e-94 | |
| P68173 | 485 | Adenosylhomocysteinase OS | N/A | no | 0.991 | 0.496 | 0.652 | 1e-93 | |
| P68172 | 485 | Adenosylhomocysteinase OS | N/A | no | 0.991 | 0.496 | 0.652 | 1e-93 | |
| Q9LK36 | 485 | Adenosylhomocysteinase 2 | no | no | 0.979 | 0.490 | 0.652 | 3e-93 | |
| P50246 | 485 | Adenosylhomocysteinase OS | N/A | no | 0.991 | 0.496 | 0.648 | 4e-93 | |
| Q9SP37 | 485 | Adenosylhomocysteinase OS | N/A | no | 0.991 | 0.496 | 0.652 | 7e-93 | |
| P50249 | 485 | Adenosylhomocysteinase OS | N/A | no | 0.991 | 0.496 | 0.655 | 1e-92 | |
| P93253 | 485 | Adenosylhomocysteinase OS | N/A | no | 0.991 | 0.496 | 0.648 | 6e-92 |
| >sp|P35007|SAHH_CATRO Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 347 bits (891), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/276 (66%), Positives = 198/276 (71%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQANGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV G+GDVG+GCAAALK GARV+ TEID ICALQA EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP T GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERKTGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G K KLT +QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYI 470
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Catharanthus roseus (taxid: 4058) EC: 3EC: .EC: 3EC: .EC: 1EC: .EC: 1 |
| >sp|P32112|SAHH_WHEAT Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 345 bits (886), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 181/276 (65%), Positives = 199/276 (72%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ +GTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQESGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAALK GARV+ TEID ICALQAL EGI +LT EDV
Sbjct: 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGIQILTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDM LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMNGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP+T+ GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPETKTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G + KLT Q+ I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGARLTKLTKSQSDYI 470
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|O23255|SAHH1_ARATH Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 345 bits (885), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 199/273 (72%), Gaps = 35/273 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ NGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAA+K GARV+ TEID ICALQAL EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA--------------- 221
TD WVFP+T+ GII+LAE LMNLGC TGHPSFVMSCSFTNQ A
Sbjct: 375 TDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEK 434
Query: 222 ---------------LHLGKPGDKFRKLTPEQA 239
LHLGK G + KL+ +Q+
Sbjct: 435 KVYVLPKHLDEKVALLHLGKLGARLTKLSKDQS 467
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methinine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Required for DNA methylation-dependent gene silencing. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P68173|SAHH_TOBAC Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 342 bits (877), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/276 (65%), Positives = 197/276 (71%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQANGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+A+ G+GDVG+GCAAALK GARV+ TEID ICALQA EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVALVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VS+ +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSDVDIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP T GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G K KL+ +QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYI 470
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Nicotiana tabacum (taxid: 4097) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P68172|SAHH_NICSY Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 342 bits (877), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/276 (65%), Positives = 197/276 (71%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQANGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+A+ G+GDVG+GCAAALK GARV+ TEID ICALQA EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVALVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VS+ +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSDVDIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP T GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G K KL+ +QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYI 470
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Nicotiana sylvestris (taxid: 4096) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9LK36|SAHH2_ARATH Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 341 bits (874), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 178/273 (65%), Positives = 195/273 (71%), Gaps = 35/273 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ G LLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAA+K GARV+ TEID ICALQAL EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +F TTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP T GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQA 239
AALHLGK G + KLT +Q+
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGARLTKLTKDQS 467
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methinine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P50246|SAHH_MEDSA Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 340 bits (873), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 199/276 (72%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MK +V VSEETT GVKRLYQMQA+GTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKTRIVGVSEETTTGVKRLYQMQASGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAALK GARV+ TEID ICALQAL EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQGGARVIVTEIDPICALQALMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
+SEA +FVTTT N DIIMV MK+MKN AIVCNIGHFDNEIDM LE Y G+KRITIKPQ
Sbjct: 315 ISEADIFVTTTGNKDIIMVSDMKKMKNNAIVCNIGHFDNEIDMHGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP+T+ GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPETKSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQIELWKEKTSGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLG+ G K KL+ +QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGQLGAKLTKLSKDQADYI 470
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Medicago sativa (taxid: 3879) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9SP37|SAHH_LUPLU Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 340 bits (871), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 180/276 (65%), Positives = 198/276 (71%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MK+ +V VSEETT GVKRLYQMQANGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV G+GDVG+GCAAALK GARV+ TEID ICALQA EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIM+ HMK+MKN AIVCNIGHFDNEIDML LE + G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP+T GIIILAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHL K G K KL+ +QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYI 470
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Lupinus luteus (taxid: 3873) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P50249|SAHH_PHASS Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 339 bits (870), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 181/276 (65%), Positives = 197/276 (71%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ +GTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQYSGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG GCAAALK GARV+ TEID ICALQAL EG+PVL EDV
Sbjct: 255 ATDVMIAGKVAVVCGYGDVGLGCAAALKTAGARVIVTEIDPICALQALMEGLPVLRLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE++ G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLESFPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD VFP T GI++LAE LMNLGC TGHPSFVMS SFTNQ
Sbjct: 375 TDRRVFPDTNSGILVLAEGRLMNLGCATGHPSFVMSSSFTNQVIAQLELWKERASGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G K KLTP QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGAKLTKLTPSQADYI 470
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Phalaenopsis sp. (taxid: 36900) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P93253|SAHH_MESCR Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 337 bits (863), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 196/276 (71%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MK LV VSEETT GVKRLYQMQA GTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKTRLVGVSEETTTGVKRLYQMQATGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+ V CG+GDVG+GCA ALKA GARV+ TEID ICALQAL EG +LT EDV
Sbjct: 255 ATDVMIAGKVGVVCGYGDVGKGCALALKAAGARVIVTEIDPICALQALMEGFQILTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLENYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD +VFP+T GII+LAE LM LGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRFVFPETNTGIIVLAEGRLMKLGCATGHPSFVMSCSFTNQVIAQLELWNERASGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G K KL+ +QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYI 470
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methinine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Mesembryanthemum crystallinum (taxid: 3544) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 243 | ||||||
| 225456806 | 485 | PREDICTED: adenosylhomocysteinase-like i | 0.991 | 0.496 | 0.692 | 1e-98 | |
| 211905341 | 485 | S-adenosyl-L-homocystein hydrolase [Goss | 0.991 | 0.496 | 0.670 | 1e-94 | |
| 356512439 | 485 | PREDICTED: adenosylhomocysteinase-like [ | 0.991 | 0.496 | 0.673 | 1e-94 | |
| 225433506 | 485 | PREDICTED: adenosylhomocysteinase isofor | 0.991 | 0.496 | 0.670 | 3e-94 | |
| 297804932 | 485 | hypothetical protein ARALYDRAFT_915516 [ | 0.991 | 0.496 | 0.655 | 1e-93 | |
| 464734 | 485 | RecName: Full=Adenosylhomocysteinase; Sh | 0.991 | 0.496 | 0.666 | 2e-93 | |
| 3242075 | 467 | S-adenosyl-L-homocysteine hydrolase [Ara | 0.979 | 0.509 | 0.655 | 3e-93 | |
| 227206354 | 291 | AT4G13940 [Arabidopsis thaliana] | 0.979 | 0.817 | 0.655 | 4e-93 | |
| 79325087 | 440 | adenosylhomocysteinase 1 [Arabidopsis th | 0.979 | 0.540 | 0.655 | 4e-93 | |
| 449442393 | 485 | PREDICTED: adenosylhomocysteinase-like [ | 0.991 | 0.496 | 0.659 | 5e-93 |
| >gi|225456806|ref|XP_002278000.1| PREDICTED: adenosylhomocysteinase-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/276 (69%), Positives = 204/276 (73%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQANGTLLF+ + T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQANGTLLFAAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAALK GA+V+ TEID ICALQAL EGIPVLT EDV
Sbjct: 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGAQVIVTEIDPICALQALMEGIPVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VS+A +FVTTT N DIIMV HMKQMKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSKADIFVTTTGNKDIIMVHHMKQMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP+T GIIILAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPETNSGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKATGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G K KL+PEQAA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGAKLTKLSPEQAAYI 470
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211905341|gb|ACJ11250.1| S-adenosyl-L-homocystein hydrolase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/276 (67%), Positives = 200/276 (72%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQANGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAALK GARV+ TEID ICALQAL EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVNHMRKMKNNAIVCNIGHFDNEIDMLGLENYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP+T GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPETNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKATGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G KLT +QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGANLTKLTKDQADYI 470
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356512439|ref|XP_003524926.1| PREDICTED: adenosylhomocysteinase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/276 (67%), Positives = 200/276 (72%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQANGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV G+GDVG+GCAAALK GARV+ TEID ICALQAL EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HMK+MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLENYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP+T GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPETNVGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G K KL+P QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGAKLTKLSPAQADYI 470
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225433506|ref|XP_002266154.1| PREDICTED: adenosylhomocysteinase isoform 1 [Vitis vinifera] gi|147783188|emb|CAN64242.1| hypothetical protein VITISV_022595 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 185/276 (67%), Positives = 199/276 (72%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MK LV VSEETT GVKRLYQMQANGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKGRLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAALK GARV+ TEID ICALQAL EGIPV T EDV
Sbjct: 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGIPVQTIEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP T GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKASGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G K KL+ +QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYI 470
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297804932|ref|XP_002870350.1| hypothetical protein ARALYDRAFT_915516 [Arabidopsis lyrata subsp. lyrata] gi|297316186|gb|EFH46609.1| hypothetical protein ARALYDRAFT_915516 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 181/276 (65%), Positives = 201/276 (72%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ NGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAA+K GARV+ TEID ICALQAL EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP+T+ GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPETKTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G + KL+ +Q+ I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGARLTKLSKDQSDYI 470
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|464734|sp|P35007.1|SAHH_CATRO RecName: Full=Adenosylhomocysteinase; Short=AdoHcyase; AltName: Full=S-adenosyl-L-homocysteine hydrolase gi|407412|emb|CAA81527.1| S-adenosyl-L-homocysteine hydrolase [Catharanthus roseus] | Back alignment and taxonomy information |
|---|
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/276 (66%), Positives = 198/276 (71%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQANGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV G+GDVG+GCAAALK GARV+ TEID ICALQA EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP T GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERKTGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G K KLT +QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYI 470
|
Source: Catharanthus roseus Species: Catharanthus roseus Genus: Catharanthus Family: Apocynaceae Order: Gentianales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3242075|emb|CAB09795.1| S-adenosyl-L-homocysteine hydrolase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 200/273 (73%), Gaps = 35/273 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ NGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 177 MKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 236
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAA+K GARV+ TEID ICALQAL EG+ VLT EDV
Sbjct: 237 ATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDV 296
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 297 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 356
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA--------------- 221
TD WVFP+T+ GII+LA+ LMNLGC TGHPSFVMSCSFTNQ A
Sbjct: 357 TDRWVFPETKAGIIVLAQGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEK 416
Query: 222 ---------------LHLGKPGDKFRKLTPEQA 239
LHLGK G + RKL+ +Q+
Sbjct: 417 KVYVLPKHLDEKVALLHLGKLGARLRKLSKDQS 449
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|227206354|dbj|BAH57232.1| AT4G13940 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 199/273 (72%), Gaps = 35/273 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ NGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 1 MKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 60
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAA+K GARV+ TEID ICALQAL EG+ VLT EDV
Sbjct: 61 ATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDV 120
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 121 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 180
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA--------------- 221
TD WVFP+T+ GII+LAE LMNLGC TGHPSFVMSCSFTNQ A
Sbjct: 181 TDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEK 240
Query: 222 ---------------LHLGKPGDKFRKLTPEQA 239
LHLGK G + KL+ +Q+
Sbjct: 241 KVYVLPKHLDEKVALLHLGKLGARLTKLSKDQS 273
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79325087|ref|NP_001031628.1| adenosylhomocysteinase 1 [Arabidopsis thaliana] gi|332657947|gb|AEE83347.1| adenosylhomocysteinase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 199/273 (72%), Gaps = 35/273 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ NGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 150 MKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 209
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAA+K GARV+ TEID ICALQAL EG+ VLT EDV
Sbjct: 210 ATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDV 269
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 270 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 329
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA--------------- 221
TD WVFP+T+ GII+LAE LMNLGC TGHPSFVMSCSFTNQ A
Sbjct: 330 TDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEK 389
Query: 222 ---------------LHLGKPGDKFRKLTPEQA 239
LHLGK G + KL+ +Q+
Sbjct: 390 KVYVLPKHLDEKVALLHLGKLGARLTKLSKDQS 422
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442393|ref|XP_004138966.1| PREDICTED: adenosylhomocysteinase-like [Cucumis sativus] gi|449505280|ref|XP_004162424.1| PREDICTED: adenosylhomocysteinase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 182/276 (65%), Positives = 200/276 (72%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ++GTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQSSGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAALK GARV+ TEID ICALQAL EG+ VLT ED
Sbjct: 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDA 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLENYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQ------------------ 218
TD WVFP+T GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 375 TDRWVFPETNVGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERASGKYEK 434
Query: 219 ------------AAALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G K KL+ +QA I
Sbjct: 435 KVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYI 470
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 243 | ||||||
| TAIR|locus:2129256 | 485 | HOG1 "HOMOLOGY-DEPENDENT GENE | 0.954 | 0.478 | 0.704 | 9.2e-86 | |
| TAIR|locus:2095193 | 485 | SAHH2 "S-adenosyl-l-homocystei | 0.954 | 0.478 | 0.695 | 4e-85 | |
| TIGR_CMR|CBU_2031 | 438 | CBU_2031 "adenosylhomocysteina | 0.901 | 0.5 | 0.524 | 2.9e-56 | |
| UNIPROTKB|P60176 | 495 | ahcY "Adenosylhomocysteinase" | 0.934 | 0.458 | 0.517 | 9.9e-56 | |
| UNIPROTKB|E2QXS7 | 433 | AHCY "Adenosylhomocysteinase" | 0.909 | 0.510 | 0.532 | 9.9e-56 | |
| UNIPROTKB|P23526 | 432 | AHCY "Adenosylhomocysteinase" | 0.909 | 0.511 | 0.532 | 1.3e-55 | |
| UNIPROTKB|F1S4Y7 | 423 | AHCY "Adenosylhomocysteinase" | 0.909 | 0.522 | 0.528 | 1.3e-55 | |
| UNIPROTKB|Q710C4 | 432 | AHCY "Adenosylhomocysteinase" | 0.909 | 0.511 | 0.528 | 1.3e-55 | |
| RGD|69260 | 432 | Ahcy "adenosylhomocysteinase" | 0.909 | 0.511 | 0.528 | 1.3e-55 | |
| UNIPROTKB|Q3MHL4 | 432 | AHCY "Adenosylhomocysteinase" | 0.909 | 0.511 | 0.524 | 4.2e-55 |
| TAIR|locus:2129256 HOG1 "HOMOLOGY-DEPENDENT GENE SILENCING 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 824 (295.1 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 169/240 (70%), Positives = 184/240 (76%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGXXXXXX-----XXXXXXXDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ NG DNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAA+K GARV+ TEID ICALQAL EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA-LHLG--KPGDKFRK 233
TD WVFP+T+ GII+LAE LMNLGC TGHPSFVMSCSFTNQ A L L K K+ K
Sbjct: 375 TDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEK 434
|
|
| TAIR|locus:2095193 SAHH2 "S-adenosyl-l-homocysteine (SAH) hydrolase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 809 (289.8 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 167/240 (69%), Positives = 180/240 (75%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGXXXXXX-----XXXXXXXDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ G DNLYG RHSLPDGLMR
Sbjct: 195 MKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAA+K GARV+ TEID ICALQAL EG+ VLT EDV
Sbjct: 255 ATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDV 314
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +F TTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 315 VSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA-LHLG--KPGDKFRK 233
TD WVFP T GII+LAE LMNLGC TGHPSFVMSCSFTNQ A L L K K+ K
Sbjct: 375 TDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEK 434
|
|
| TIGR_CMR|CBU_2031 CBU_2031 "adenosylhomocysteinase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 549 (198.3 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 120/229 (52%), Positives = 148/229 (64%)
Query: 9 VSEETTMGVKRLYQMQANGXXXXXX-----XXXXXXXDNLYGFRHSLPDGLMRATDITIA 63
VSEETT GV RLY+M G DNLYG R SL D + RATD+ IA
Sbjct: 161 VSEETTTGVHRLYRMLKEGSLKFPAINVNDSVTKSKFDNLYGCRESLIDSIKRATDVMIA 220
Query: 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF 123
GK V CG+GDVG+GCA +L+A GA V TEID ICALQA EG V+T +++ A +F
Sbjct: 221 GKRVVVCGYGDVGKGCAQSLRAYGATVYITEIDPICALQAAMEGYRVVTMDEMADSADIF 280
Query: 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFP 183
VT T N DII HM +MK+ AIVCNIGHFDNEID+ L+ Y+ + IKPQ D +FP
Sbjct: 281 VTATGNTDIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDYQWMN---IKPQVDQVIFP 337
Query: 184 QTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA-LHLGKPGDKF 231
+R + +LA+ L+NLGC TGHPSFVMS SFTNQ A + L + +K+
Sbjct: 338 DGKR-LTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPEKY 385
|
|
| UNIPROTKB|P60176 ahcY "Adenosylhomocysteinase" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 553 (199.7 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 121/234 (51%), Positives = 146/234 (62%)
Query: 4 EMLVSVSEETTMGVKRLYQMQANGXXXXXX-----XXXXXXXDNLYGFRHSLPDGLMRAT 58
E + V+EETT GV RLYQ A G DN YG RHSL DG+ R T
Sbjct: 210 ESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFDNKYGTRHSLIDGINRGT 269
Query: 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVS 118
D I GK + CG+GDVG+GCA A+K GARV TEID I ALQA+ EG V+T E+ +
Sbjct: 270 DALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIG 329
Query: 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTD 178
+A + VT T N DIIM+ H+K MK+ AI+ NIGHFDNEIDM LE G R+ +KPQ D
Sbjct: 330 DADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVD 388
Query: 179 PWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA-LHLGKPGDKF 231
W F T R II+L+E L+NLG TGHPSFVMS SF NQ A + L D++
Sbjct: 389 LWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKNDEY 442
|
|
| UNIPROTKB|E2QXS7 AHCY "Adenosylhomocysteinase" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 546 (197.3 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 122/229 (53%), Positives = 147/229 (64%)
Query: 9 VSEETTMGVKRLYQMQANG-----XXXXXXXXXXXXXDNLYGFRHSLPDGLMRATDITIA 63
+SEETT GV LY+M ANG DNLYG R SL DG+ RATD+ IA
Sbjct: 154 ISEETTTGVHNLYKMMANGKLKVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIA 213
Query: 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF 123
GK+AV G+GDVG+GCA AL+ GARV+ TEID I ALQA EG V T ++ E +F
Sbjct: 214 GKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIF 273
Query: 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFP 183
VTTT DII+ RH +QMK+ AIVCNIGHFD EID+ L ++++ IKPQ D +
Sbjct: 274 VTTTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKPQVDRYRLK 332
Query: 184 QTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA-LHLGKPGDKF 231
RR II+LAE L+NLGC GHPSFVMS SFTNQ A + L DK+
Sbjct: 333 NGRR-IILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHPDKY 380
|
|
| UNIPROTKB|P23526 AHCY "Adenosylhomocysteinase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 545 (196.9 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 122/229 (53%), Positives = 147/229 (64%)
Query: 9 VSEETTMGVKRLYQMQANG-----XXXXXXXXXXXXXDNLYGFRHSLPDGLMRATDITIA 63
+SEETT GV LY+M ANG DNLYG R SL DG+ RATD+ IA
Sbjct: 153 ISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIA 212
Query: 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF 123
GK+AV G+GDVG+GCA AL+ GARV+ TEID I ALQA EG V T ++ E +F
Sbjct: 213 GKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIF 272
Query: 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFP 183
VTTT DII+ RH +QMK+ AIVCNIGHFD EID+ L ++++ IKPQ D +
Sbjct: 273 VTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKPQVDRYRLK 331
Query: 184 QTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA-LHLGKPGDKF 231
RR II+LAE L+NLGC GHPSFVMS SFTNQ A + L DK+
Sbjct: 332 NGRR-IILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDKY 379
|
|
| UNIPROTKB|F1S4Y7 AHCY "Adenosylhomocysteinase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 545 (196.9 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 121/229 (52%), Positives = 148/229 (64%)
Query: 9 VSEETTMGVKRLYQMQANG-----XXXXXXXXXXXXXDNLYGFRHSLPDGLMRATDITIA 63
+SEETT GV LY+M+ANG DNLYG R SL DG+ RATD+ IA
Sbjct: 144 ISEETTTGVHNLYKMKANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIA 203
Query: 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF 123
GK+AV G+GDVG+GCA AL+ GARV+ TEID I ALQA EG V T ++ E +F
Sbjct: 204 GKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIF 263
Query: 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFP 183
VTTT DII+ RH +QMK+ AIVCNIGHFD EID+ L ++++ IKPQ D ++
Sbjct: 264 VTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKPQVDRYLLK 322
Query: 184 QTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA-LHLGKPGDKF 231
R II+LAE L+NLGC GHPSFVMS SFTNQ A + L DK+
Sbjct: 323 NGHR-IILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHPDKY 370
|
|
| UNIPROTKB|Q710C4 AHCY "Adenosylhomocysteinase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 545 (196.9 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 121/229 (52%), Positives = 148/229 (64%)
Query: 9 VSEETTMGVKRLYQMQANG-----XXXXXXXXXXXXXDNLYGFRHSLPDGLMRATDITIA 63
+SEETT GV LY+M+ANG DNLYG R SL DG+ RATD+ IA
Sbjct: 153 ISEETTTGVHNLYKMKANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIA 212
Query: 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF 123
GK+AV G+GDVG+GCA AL+ GARV+ TEID I ALQA EG V T ++ E +F
Sbjct: 213 GKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIF 272
Query: 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFP 183
VTTT DII+ RH +QMK+ AIVCNIGHFD EID+ L ++++ IKPQ D ++
Sbjct: 273 VTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKPQVDRYLLK 331
Query: 184 QTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA-LHLGKPGDKF 231
R II+LAE L+NLGC GHPSFVMS SFTNQ A + L DK+
Sbjct: 332 NGHR-IILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHPDKY 379
|
|
| RGD|69260 Ahcy "adenosylhomocysteinase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 545 (196.9 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 121/229 (52%), Positives = 147/229 (64%)
Query: 9 VSEETTMGVKRLYQMQANG-----XXXXXXXXXXXXXDNLYGFRHSLPDGLMRATDITIA 63
+SEETT GV LY+M ANG DNLYG R SL DG+ RATD+ IA
Sbjct: 153 ISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIA 212
Query: 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF 123
GK+AV G+GDVG+GCA AL+ GARV+ TEID I ALQA EG V T ++ E +F
Sbjct: 213 GKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACKEGNIF 272
Query: 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFP 183
VTTT DII+ RH +QMK+ AIVCNIGHFD EID+ L ++++ IKPQ D ++
Sbjct: 273 VTTTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKPQVDRYLLK 331
Query: 184 QTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA-LHLGKPGDKF 231
R II+LAE L+NLGC GHPSFVMS SFTNQ A + L DK+
Sbjct: 332 NGHR-IILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDKY 379
|
|
| UNIPROTKB|Q3MHL4 AHCY "Adenosylhomocysteinase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 540 (195.1 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 120/229 (52%), Positives = 147/229 (64%)
Query: 9 VSEETTMGVKRLYQMQANG-----XXXXXXXXXXXXXDNLYGFRHSLPDGLMRATDITIA 63
+SEETT GV LY+M A G DNLYG R SL DG+ RATD+ IA
Sbjct: 153 ISEETTTGVHNLYKMMAKGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIA 212
Query: 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF 123
GK+AV G+GDVG+GCA AL+ GARV+ TEID I ALQA EG V T ++ E +F
Sbjct: 213 GKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIF 272
Query: 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFP 183
VTTT DII+ +H +QMK+ AIVCNIGHFD EID+ L ++++ IKPQ D ++
Sbjct: 273 VTTTGCTDIILGQHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKPQVDRYLLK 331
Query: 184 QTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAA-LHLGKPGDKF 231
RR II+LAE L+NLGC GHPSFVMS SFTNQ A + L DK+
Sbjct: 332 NGRR-IILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHPDKY 379
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00015916001 | RecName- Full=Adenosylhomocysteinase; EC=3.3.1.1; (444 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00017439001 | SubName- Full=Chromosome chr6 scaffold_15, whole genome shotgun sequence; (767 aa) | • | • | • | 0.942 | ||||||
| GSVIVG00003836001 | SubName- Full=Chromosome chr8 scaffold_150, whole genome shotgun sequence; (765 aa) | • | • | • | 0.941 | ||||||
| GSVIVG00000669001 | SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (403 aa) | • | • | 0.923 | |||||||
| GSVIVG00020034001 | SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (330 aa) | • | • | 0.915 | |||||||
| GSVIVG00021002001 | SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (500 aa) | • | • | 0.911 | |||||||
| GSVIVG00030336001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (325 aa) | • | • | 0.911 | |||||||
| GSVIVG00023763001 | SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (345 aa) | • | • | 0.910 | |||||||
| GSVIVG00025412001 | SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (816 aa) | • | 0.899 | ||||||||
| GSVIVG00024734001 | RecName- Full=Cytosine-specific methyltransferase; EC=2.1.1.37; (926 aa) | • | 0.899 | ||||||||
| GSVIVG00003629001 | RecName- Full=Cytosine-specific methyltransferase; EC=2.1.1.37; (1447 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 243 | |||
| PLN02494 | 477 | PLN02494, PLN02494, adenosylhomocysteinase | 1e-138 | |
| smart00996 | 426 | smart00996, AdoHcyase, S-adenosyl-L-homocysteine h | 1e-121 | |
| PTZ00075 | 476 | PTZ00075, PTZ00075, Adenosylhomocysteinase; Provis | 1e-117 | |
| cd00401 | 402 | cd00401, SAHH, S-Adenosylhomocysteine Hydrolase, N | 1e-108 | |
| PRK05476 | 425 | PRK05476, PRK05476, S-adenosyl-L-homocysteine hydr | 1e-107 | |
| pfam05221 | 430 | pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hy | 1e-102 | |
| COG0499 | 420 | COG0499, SAM1, S-adenosylhomocysteine hydrolase [C | 4e-93 | |
| TIGR00936 | 407 | TIGR00936, ahcY, adenosylhomocysteinase | 3e-88 | |
| pfam00670 | 162 | pfam00670, AdoHcyase_NAD, S-adenosyl-L-homocystein | 2e-83 | |
| smart00997 | 162 | smart00997, AdoHcyase_NAD, S-adenosyl-L-homocystei | 7e-72 | |
| cd12154 | 310 | cd12154, FDH_GDH_like, Formate/glycerate dehydroge | 5e-21 | |
| pfam02254 | 116 | pfam02254, TrkA_N, TrkA-N domain | 3e-04 | |
| cd05300 | 313 | cd05300, 2-Hacid_dh_1, Putative D-isomer specific | 0.001 |
| >gnl|CDD|178111 PLN02494, PLN02494, adenosylhomocysteinase | Back alignment and domain information |
|---|
Score = 397 bits (1021), Expect = e-138
Identities = 184/276 (66%), Positives = 199/276 (72%), Gaps = 35/276 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MKE LV VSEETT GVKRLYQMQ NGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 187 MKERLVGVSEETTTGVKRLYQMQKNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 246
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAAA+KA GARV+ TEID ICALQAL EG VLT EDV
Sbjct: 247 ATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDV 306
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIMV HM++MKN AIVCNIGHFDNEIDML LE Y G+KRITIKPQ
Sbjct: 307 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 366
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219
TD WVFP T GII+LAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 367 TDRWVFPDTGSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKKSGKYEK 426
Query: 220 -------------AALHLGKPGDKFRKLTPEQAACI 242
AALHLGK G K KL+ +QA I
Sbjct: 427 KVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYI 462
|
Length = 477 |
| >gnl|CDD|214963 smart00996, AdoHcyase, S-adenosyl-L-homocysteine hydrolase | Back alignment and domain information |
|---|
Score = 350 bits (900), Expect = e-121
Identities = 145/274 (52%), Positives = 170/274 (62%), Gaps = 34/274 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
M + + VSEETT GV RLYQM G LLF ++ T FDNLYG R SL DG+ R
Sbjct: 140 MLKKIRGVSEETTTGVHRLYQMAKKGKLLFPAINVNDSVTKSKFDNLYGCRESLVDGIKR 199
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCA +L+ GARV+ TEID ICALQA +G V+T E+V
Sbjct: 200 ATDVMIAGKVAVVCGYGDVGKGCAQSLRGQGARVIVTEIDPICALQAAMDGFEVVTMEEV 259
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
+A +FVTTT N D+I HM+ MK+ AIVCNIGHFDNEID+ L G+K IKPQ
Sbjct: 260 APQADIFVTTTGNKDVITREHMRAMKDGAIVCNIGHFDNEIDVASLRNNPGLKWENIKPQ 319
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219
D FP +R II+LAE L+NLGC TGHPSFVMS SFTNQ
Sbjct: 320 VDHITFPDGKR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKPGKYKNGV 378
Query: 220 -----------AALHLGKPGDKFRKLTPEQAACI 242
A LHL K G K KLT EQA I
Sbjct: 379 YVLPKKLDEKVARLHLEKLGAKLTKLTKEQADYI 412
|
Length = 426 |
| >gnl|CDD|240258 PTZ00075, PTZ00075, Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Score = 342 bits (878), Expect = e-117
Identities = 148/272 (54%), Positives = 172/272 (63%), Gaps = 36/272 (13%)
Query: 6 LVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDI 60
+V VSEETT GV RLY+M G LLF + T FDN+YG RHSL DG+ RATD+
Sbjct: 191 IVGVSEETTTGVHRLYKMLKKGELLFPAINVNDSVTKSKFDNIYGCRHSLIDGIFRATDV 250
Query: 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEA 120
IAGK V CG+GDVG+GCA AL+ GARV+ TEID ICALQA EG V+T EDVV A
Sbjct: 251 MIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETA 310
Query: 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPW 180
+FVT T N DII + HM++MKN AIV NIGHFDNEI + +LEAY GI+ + IKPQ D +
Sbjct: 311 DIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRY 370
Query: 181 VFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA--------------------- 219
FP +GII+LAE L+NLGC TGHPSFVMS SFTNQ
Sbjct: 371 TFP-DGKGIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWENRDTGKYPNGVYK 429
Query: 220 ---------AALHLGKPGDKFRKLTPEQAACI 242
A LHL K G K KLT +QA I
Sbjct: 430 LPKELDEKVARLHLKKLGAKLTKLTDKQAEYI 461
|
Length = 476 |
| >gnl|CDD|240619 cd00401, SAHH, S-Adenosylhomocysteine Hydrolase, NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 317 bits (816), Expect = e-108
Identities = 117/272 (43%), Positives = 151/272 (55%), Gaps = 35/272 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
+ + ++ SEETT GV RL M+ G LLF ++ T FDN YG S DG+ R
Sbjct: 128 LLKKIIGGSEETTTGVHRLRAMEKEGKLLFPAIAVNDAVTKHKFDNRYGTGQSTIDGIKR 187
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
AT++ IAGK+ V G+G VG+GCA + +GARV+ TE+D ICALQA +G V+ E+
Sbjct: 188 ATNVLIAGKVVVVAGYGWVGKGCAMRARGLGARVIVTEVDPICALQAAMDGFEVMPMEEA 247
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
+FVT T N D+I H ++MK+ AI+CN GHFD EID+ LE +++ I+PQ
Sbjct: 248 AKIGDIFVTATGNKDVIRGEHFEKMKDGAILCNAGHFDVEIDVAALEEL-AVEKREIRPQ 306
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219
D + P RR II+LAE L+NL C TGHPSFVM SF NQA
Sbjct: 307 VDEYTLPDGRR-IILLAEGRLVNLACATGHPSFVMDMSFANQALAQIELWKNRDKLEPGV 365
Query: 220 -----------AALHLGKPGDKFRKLTPEQAA 240
A L L G K KLT EQA
Sbjct: 366 YVLPKELDEEVARLKLEALGIKLDKLTEEQAE 397
|
S-adenosyl-L-homocysteine hydrolase (SAHH, AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homotetramers, with each monomer binding one molecule of NAD+. Length = 402 |
| >gnl|CDD|235488 PRK05476, PRK05476, S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 316 bits (812), Expect = e-107
Identities = 123/268 (45%), Positives = 152/268 (56%), Gaps = 35/268 (13%)
Query: 9 VSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMRATDITIA 63
V+EETT GV RLY M +G L F ++ T FDN YG SL DG+ RAT++ IA
Sbjct: 152 VTEETTTGVHRLYAMAKDGALKFPAINVNDSVTKSKFDNRYGTGESLLDGIKRATNVLIA 211
Query: 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF 123
GK+ V G+GDVG+GCA L+ +GARV+ TE+D ICALQA +G V+T E+ +F
Sbjct: 212 GKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDIF 271
Query: 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFP 183
VT T N D+I HM+ MK+ AI+ NIGHFDNEID+ LE +K IKPQ D + P
Sbjct: 272 VTATGNKDVITAEHMEAMKDGAILANIGHFDNEIDVAALEEL-AVKWREIKPQVDEYTLP 330
Query: 184 QTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA------------------------ 219
+R II+LAE L+NLG TGHPS VM SF NQA
Sbjct: 331 DGKR-IILLAEGRLVNLGAATGHPSEVMDMSFANQALAQIELFTNRGKLEPGVYVLPKEL 389
Query: 220 ----AALHLGKPGDKFRKLTPEQAACIR 243
A L L G K +LT EQA I
Sbjct: 390 DEEVARLKLKALGVKLDELTEEQAEYIG 417
|
Length = 425 |
| >gnl|CDD|218507 pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase | Back alignment and domain information |
|---|
Score = 303 bits (778), Expect = e-102
Identities = 145/273 (53%), Positives = 167/273 (61%), Gaps = 37/273 (13%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
+ VSEETT GV RLY+M G LLF ++ T FDNLYG R SLPDG+ R
Sbjct: 143 YLAGIRGVSEETTTGVHRLYKMLKKGKLLFPAINVNDSVTKSKFDNLYGCRESLPDGIKR 202
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV CG+GDVG+GCAA+L+ GARV+ TEID ICALQA EG V+T E+V
Sbjct: 203 ATDVMIAGKVAVVCGYGDVGKGCAASLRGQGARVIVTEIDPICALQAAMEGYQVVTLEEV 262
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
V +A +FVTTT DII+ RH MK AIVCNIGHFD EID+ L Y K IKPQ
Sbjct: 263 VKDADIFVTTTGCVDIIVGRHFMNMKKDAIVCNIGHFDCEIDVGWLN-YNAKKITNIKPQ 321
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219
D + P RR II+LAE L+NLGC TGHPSFVMS SFTNQ
Sbjct: 322 VDRYTLPNGRR-IILLAEGRLLNLGCATGHPSFVMSNSFTNQVLAQIELWTKRDTGKYEV 380
Query: 220 -------------AALHLGKPGDKFRKLTPEQA 239
A LHLGK G K KLT +QA
Sbjct: 381 GVYVLPKHLDEKVARLHLGKLGVKLTKLTDKQA 413
|
Length = 430 |
| >gnl|CDD|223573 COG0499, SAM1, S-adenosylhomocysteine hydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Score = 279 bits (715), Expect = 4e-93
Identities = 106/242 (43%), Positives = 145/242 (59%), Gaps = 11/242 (4%)
Query: 1 GMKEMLVS---VSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPD 52
E+L + +EETT GV RL M+ +G L F ++ T LFDN YG SL D
Sbjct: 138 ERPELLDAIKGGTEETTTGVHRLRAMEKDGVLKFPAINVNDSVTKSLFDNRYGTGQSLLD 197
Query: 53 GLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT 112
G++RAT++ +AGK V G+G VGRG A L+ +GARV+ TE+D I AL+A +G V+T
Sbjct: 198 GILRATNVLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMT 257
Query: 113 REDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRIT 172
E+ +FVT T N D+I H ++MK+ AI+ N GHFD EID+ LE +++
Sbjct: 258 MEEAAKTGDIFVTATGNKDVIRKEHFEKMKDGAILANAGHFDVEIDVAGLEE-LAVEKRE 316
Query: 173 IKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA-AALHLGKPGDKF 231
++PQ D + P +R II+LAE L+NL TGHPS VM SF NQA A ++L K K
Sbjct: 317 VRPQVDEYELPDGKR-IILLAEGRLVNLAAATGHPSEVMDMSFANQALAQIYLVKNHGKL 375
Query: 232 RK 233
Sbjct: 376 EP 377
|
Length = 420 |
| >gnl|CDD|213572 TIGR00936, ahcY, adenosylhomocysteinase | Back alignment and domain information |
|---|
Score = 266 bits (682), Expect = 3e-88
Identities = 106/241 (43%), Positives = 141/241 (58%), Gaps = 11/241 (4%)
Query: 2 MKEMLVSV---SEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDG 53
E+L + SEETT GV RL M+A G L F + T LFDN YG S DG
Sbjct: 126 RPELLEKIIGGSEETTTGVIRLRAMEAEGVLKFPAINVNDAYTKSLFDNRYGTGQSTIDG 185
Query: 54 LMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTR 113
++RAT++ IAGK V G+G G+G A + +GARV+ TE+D I AL+A +G V+T
Sbjct: 186 ILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTM 245
Query: 114 EDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITI 173
E+ +F+T T N D+I H + MK+ AIV NIGHFD EID+ LE ++++ +
Sbjct: 246 EEAAKIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEE-LAVEKVNV 304
Query: 174 KPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA-AALHLGKPGDKFR 232
+PQ D ++ RR I +LAE L+NL GHPS VM SF NQA AA +L K DK
Sbjct: 305 RPQVDEYILKDGRR-IYLLAEGRLVNLAAAEGHPSEVMDMSFANQALAAEYLWKNHDKLE 363
Query: 233 K 233
Sbjct: 364 P 364
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704) [Energy metabolism, Amino acids and amines]. Length = 407 |
| >gnl|CDD|109716 pfam00670, AdoHcyase_NAD, S-adenosyl-L-homocysteine hydrolase, NAD binding domain | Back alignment and domain information |
|---|
Score = 245 bits (628), Expect = 2e-83
Identities = 102/164 (62%), Positives = 119/164 (72%), Gaps = 2/164 (1%)
Query: 42 NLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICAL 101
NLYG R SL DG+ RATD+ IAGK+AV CG+GDVG+GCAA+LK GARV+ TEID ICAL
Sbjct: 1 NLYGCRESLIDGIKRATDVMIAGKVAVVCGYGDVGKGCAASLKGQGARVIVTEIDPICAL 60
Query: 102 QALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLD 161
QA EG V+T E+VV +A +FVTTT N DII HM +MKN AIVCNIGHFDNEID+
Sbjct: 61 QAAMEGFQVVTLEEVVKKADIFVTTTGNKDIITGEHMAKMKNDAIVCNIGHFDNEIDVAW 120
Query: 162 LEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTG 205
L G K IKPQ D + P + II+LAE L+NLGC TG
Sbjct: 121 LNTN-GKKWENIKPQVDRYTLPDGKH-IILLAEGRLVNLGCATG 162
|
Length = 162 |
| >gnl|CDD|198065 smart00997, AdoHcyase_NAD, S-adenosyl-L-homocysteine hydrolase, NAD binding domain | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 7e-72
Identities = 75/164 (45%), Positives = 104/164 (63%), Gaps = 2/164 (1%)
Query: 42 NLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICAL 101
N YG SL DG++RAT++ +AGK V G+GDVG+G AA L+ +GARV+ TEID I AL
Sbjct: 1 NRYGTGESLLDGILRATNVLLAGKNVVVAGYGDVGKGVAARLRGLGARVIVTEIDPIRAL 60
Query: 102 QALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLD 161
+A +G V+ E+ A +FVT T N D+I H + MK+ AI+ N GHFD EID+
Sbjct: 61 EAAMDGFEVMKMEEAAKRADIFVTATGNKDVITREHFRAMKDGAILANAGHFDVEIDVAA 120
Query: 162 LEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTG 205
LE +++ ++PQ D + P +R I +LAE L+NL TG
Sbjct: 121 LEEL-AVEKREVRPQVDEYTLPDGKR-IYLLAEGRLVNLAAATG 162
|
Length = 162 |
| >gnl|CDD|240631 cd12154, FDH_GDH_like, Formate/glycerate dehydrogenases, D-specific 2-hydroxy acid dehydrogenases and related dehydrogenases | Back alignment and domain information |
|---|
Score = 89.2 bits (221), Expect = 5e-21
Identities = 47/234 (20%), Positives = 75/234 (32%), Gaps = 37/234 (15%)
Query: 9 VSEETTMGVKRLYQMQAN--GTLLFSEET--TTLLFDNLYGFRHSLPDGLMRATDI---- 60
+ T R G + E LL N G + R ++
Sbjct: 91 LFTYTIGADHRDLTEALARAGLTAIAVEGVELPLLTSNSIGAGELSVQFIARFLEVQQPG 150
Query: 61 ------TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR 113
+AGK V G G VG+ A L+ +GA+V+ T+I++ Q G V
Sbjct: 151 RLGGAPDVAGKTVVVVGAGVVGKEAAQMLRGLGAQVLITDINVEALEQLEELGGKNVEEL 210
Query: 114 EDVVSEAGLFVTTTENADIIMVR-----HMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGI 168
E+ ++EA + VTTT ++QMK +++ N+
Sbjct: 211 EEALAEADVIVTTTLLPGKRAGILVPEELVEQMKPGSVIVNVAVGAVGCVQALH------ 264
Query: 169 KRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQAAAL 222
T G++ + + GC G P N AL
Sbjct: 265 --------TQLLE---EGHGVVHYGDVNMPGPGCAMGVPWDATLRLAANTLPAL 307
|
The formate/glycerate dehydrogenase like family contains a diverse group of enzymes such as formate dehydrogenase (FDH), glycerate dehydrogenase (GDH), D-lactate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine hydrolase, that share a common 2-domain structure. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar domains of the alpha/beta Rossmann fold NAD+ binding form. The NAD(P) binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD(P) is bound, primarily to the C-terminal portion of the 2nd (internal) domain. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. 2-hydroxyacid dehydrogenases are enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of a hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. Length = 310 |
| >gnl|CDD|216949 pfam02254, TrkA_N, TrkA-N domain | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 3e-04
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 70 CGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL----TREDVVSEAGL--- 122
G+G VGR A L+ G V+ + D + EG+PV+ T E+V+ EAG+
Sbjct: 4 IGYGRVGRSLAEELREGGPDVVVIDKDPERVEELREEGVPVVVGDATDEEVLEEAGIEEA 63
Query: 123 --FVTTTEN--ADIIMVRHMKQMKNAAIVCNIGHFDNEIDML 160
V T + A+I++V +++ + + ++L
Sbjct: 64 DAVVAATGDDEANILIVLLARELNPKLKIIARANDPEHAELL 105
|
This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD. Length = 116 |
| >gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase | Back alignment and domain information |
|---|
Score = 39.0 bits (92), Expect = 0.001
Identities = 27/114 (23%), Positives = 40/114 (35%), Gaps = 42/114 (36%)
Query: 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGT---------EIDLICALQALTEGIPVL 111
+AGK + G GD+GR A KA G RV+G +D + L E +P
Sbjct: 131 ELAGKTVLIVGLGDIGREIARRAKAFGMRVIGVRRSGRPAPPVVDEVYTPDELDELLP-- 188
Query: 112 TREDVVSEAGLFVTTTENADIIMV--------RHM------KQMKNAAIVCNIG 151
AD ++ R + MK A++ N+G
Sbjct: 189 -----------------EADYVVNALPLTPETRGLFNAERFAAMKPGAVLINVG 225
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 243 | |||
| COG0499 | 420 | SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me | 100.0 | |
| KOG1370 | 434 | consensus S-adenosylhomocysteine hydrolase [Coenzy | 100.0 | |
| PLN02494 | 477 | adenosylhomocysteinase | 100.0 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 100.0 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 100.0 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 100.0 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 100.0 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 100.0 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 99.69 | |
| PF05221 | 268 | AdoHcyase: S-adenosyl-L-homocysteine hydrolase; In | 99.69 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 99.69 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 99.59 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 99.58 | |
| PRK15409 | 323 | bifunctional glyoxylate/hydroxypyruvate reductase | 99.55 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 99.55 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 99.54 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 99.5 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 99.48 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 99.46 | |
| PLN02306 | 386 | hydroxypyruvate reductase | 99.46 | |
| PLN02928 | 347 | oxidoreductase family protein | 99.46 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 99.45 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 99.44 | |
| KOG0068 | 406 | consensus D-3-phosphoglycerate dehydrogenase, D-is | 99.44 | |
| PRK11790 | 409 | D-3-phosphoglycerate dehydrogenase; Provisional | 99.43 | |
| PRK15438 | 378 | erythronate-4-phosphate dehydrogenase PdxB; Provis | 99.41 | |
| KOG0069 | 336 | consensus Glyoxylate/hydroxypyruvate reductase (D- | 99.4 | |
| TIGR01327 | 525 | PGDH D-3-phosphoglycerate dehydrogenase. This mode | 99.39 | |
| PRK13581 | 526 | D-3-phosphoglycerate dehydrogenase; Provisional | 99.38 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 99.38 | |
| PRK00257 | 381 | erythronate-4-phosphate dehydrogenase; Validated | 99.37 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 99.37 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 99.32 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 99.29 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 99.27 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 99.25 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 99.25 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 99.22 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 99.22 | |
| PRK08605 | 332 | D-lactate dehydrogenase; Validated | 99.2 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 99.16 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 99.13 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 99.13 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 99.12 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 99.09 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 99.06 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 99.06 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 99.05 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 99.03 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 99.01 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 98.99 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 98.98 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 98.98 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 98.97 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.97 | |
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 98.94 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 98.94 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 98.92 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 98.91 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 98.91 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 98.9 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 98.87 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 98.83 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 98.82 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 98.78 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 98.77 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 98.75 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 98.73 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 98.73 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.71 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.71 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 98.68 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 98.66 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.64 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 98.64 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 98.62 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 98.61 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.61 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.61 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 98.61 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 98.6 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 98.56 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.55 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.55 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 98.54 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 98.53 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 98.53 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.52 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.52 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 98.52 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 98.51 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 98.5 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 98.48 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 98.48 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 98.48 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 98.47 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 98.47 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 98.47 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.47 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.47 | |
| PRK05225 | 487 | ketol-acid reductoisomerase; Validated | 98.47 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.46 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.46 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.44 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.44 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 98.43 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.43 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 98.42 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.42 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.42 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.41 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.41 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.41 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 98.41 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.41 | |
| TIGR00465 | 314 | ilvC ketol-acid reductoisomerase. This is the seco | 98.4 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 98.4 | |
| PLN02516 | 299 | methylenetetrahydrofolate dehydrogenase (NADP+) | 98.4 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 98.39 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 98.39 | |
| PRK14182 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.39 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.39 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 98.39 | |
| PLN02897 | 345 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 98.37 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 98.37 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 98.37 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 98.37 | |
| PRK14178 | 279 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.36 | |
| PLN02616 | 364 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 98.36 | |
| PRK14181 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.36 | |
| PRK14193 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.36 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 98.34 | |
| PRK14184 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.32 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 98.32 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 98.32 | |
| PRK14185 | 293 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.31 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 98.31 | |
| PRK14168 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.3 | |
| PRK14167 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.3 | |
| COG0059 | 338 | IlvC Ketol-acid reductoisomerase [Amino acid trans | 98.3 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 98.29 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 98.29 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 98.28 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.28 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.28 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 98.28 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 98.28 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 98.27 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 98.27 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.26 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 98.26 | |
| COG0190 | 283 | FolD 5,10-methylene-tetrahydrofolate dehydrogenase | 98.25 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 98.24 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 98.23 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 98.22 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 98.22 | |
| PRK14174 | 295 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.22 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 98.22 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 98.21 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 98.21 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 98.21 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 98.21 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 98.2 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 98.2 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.19 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 98.19 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 98.18 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 98.18 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 98.17 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 98.16 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.16 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 98.16 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 98.16 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 98.15 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 98.15 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.14 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.14 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 98.14 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 98.13 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 98.13 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 98.12 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 98.11 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 98.11 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 98.11 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.1 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 98.1 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 98.09 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 98.09 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 98.09 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 98.08 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 98.07 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 98.07 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 98.07 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 98.07 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 98.07 | |
| TIGR02371 | 325 | ala_DH_arch alanine dehydrogenase, Archaeoglobus f | 98.06 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 98.06 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 98.06 | |
| cd01076 | 227 | NAD_bind_1_Glu_DH NAD(P) binding domain of glutama | 98.06 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 98.06 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 98.05 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 98.05 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 98.05 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 98.05 | |
| PRK08268 | 507 | 3-hydroxy-acyl-CoA dehydrogenase; Validated | 98.05 | |
| PLN02712 | 667 | arogenate dehydrogenase | 98.04 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 98.03 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.03 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 98.03 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.02 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 98.02 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.02 | |
| PLN02256 | 304 | arogenate dehydrogenase | 98.02 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.01 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 98.0 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 98.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.0 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 97.99 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 97.99 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 97.99 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.98 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.98 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.98 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.98 | |
| TIGR02279 | 503 | PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa | 97.97 | |
| PRK08507 | 275 | prephenate dehydrogenase; Validated | 97.96 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 97.96 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 97.96 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 97.96 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.96 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 97.96 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 97.95 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 97.95 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.95 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 97.95 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 97.95 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 97.94 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 97.94 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.94 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 97.94 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 97.93 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.92 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 97.92 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 97.92 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.91 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 97.91 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 97.91 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.91 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 97.91 | |
| PRK06407 | 301 | ornithine cyclodeaminase; Provisional | 97.9 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.9 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 97.89 | |
| PRK06823 | 315 | ornithine cyclodeaminase; Validated | 97.89 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.88 | |
| PF02423 | 313 | OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst | 97.88 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.88 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 97.88 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.88 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 97.87 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 97.87 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.87 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.87 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 97.86 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 97.86 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.86 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 97.85 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.85 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.85 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 97.85 | |
| PLN02712 | 667 | arogenate dehydrogenase | 97.84 | |
| PRK06046 | 326 | alanine dehydrogenase; Validated | 97.84 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 97.84 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 97.84 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.83 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 97.83 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 97.83 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.83 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 97.82 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 97.82 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 97.81 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.8 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 97.8 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 97.8 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.8 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.79 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 97.79 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.79 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 97.78 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.78 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 97.78 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 97.78 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 97.77 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 97.77 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 97.76 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 97.76 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 97.76 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 97.75 | |
| PRK14806 | 735 | bifunctional cyclohexadienyl dehydrogenase/ 3-phos | 97.75 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 97.75 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 97.75 | |
| COG0345 | 266 | ProC Pyrroline-5-carboxylate reductase [Amino acid | 97.75 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.75 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 97.74 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 97.74 | |
| PRK14031 | 444 | glutamate dehydrogenase; Provisional | 97.73 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.73 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 97.72 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 97.71 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.71 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 97.71 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 97.7 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 97.69 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 97.69 | |
| KOG0409 | 327 | consensus Predicted dehydrogenase [General functio | 97.69 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 97.68 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 97.68 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 97.68 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 97.68 | |
| PRK07589 | 346 | ornithine cyclodeaminase; Validated | 97.67 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 97.67 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 97.66 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.66 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 97.65 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.65 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.65 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 97.64 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 97.64 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 97.63 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 97.63 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 97.63 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 97.63 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 97.63 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 97.63 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 97.62 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.61 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 97.61 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 97.61 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 97.61 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.61 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.6 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.6 | |
| PLN02477 | 410 | glutamate dehydrogenase | 97.6 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 97.59 | |
| PRK07680 | 273 | late competence protein ComER; Validated | 97.59 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.59 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.58 | |
| COG2423 | 330 | Predicted ornithine cyclodeaminase, mu-crystallin | 97.58 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.58 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 97.58 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.57 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 97.57 | |
| PRK12862 | 763 | malic enzyme; Reviewed | 97.57 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 97.57 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.57 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.56 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.56 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 97.56 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 97.56 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 97.56 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 97.55 | |
| PF00208 | 244 | ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Val | 97.55 | |
| PRK15182 | 425 | Vi polysaccharide biosynthesis protein TviB; Provi | 97.55 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 97.55 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 97.55 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 97.54 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.53 | |
| PTZ00079 | 454 | NADP-specific glutamate dehydrogenase; Provisional | 97.53 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.53 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 97.53 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.53 | |
| cd05312 | 279 | NAD_bind_1_malic_enz NAD(P) binding domain of mali | 97.53 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 97.53 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.52 | |
| PRK06476 | 258 | pyrroline-5-carboxylate reductase; Reviewed | 97.52 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 97.52 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.52 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 97.51 | |
| PRK07232 | 752 | bifunctional malic enzyme oxidoreductase/phosphotr | 97.51 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 97.51 | |
| cd05313 | 254 | NAD_bind_2_Glu_DH NAD(P) binding domain of glutama | 97.51 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 97.51 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 97.5 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 97.49 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.49 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.48 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 97.48 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 97.48 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.48 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 97.48 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.48 | |
| PRK00676 | 338 | hemA glutamyl-tRNA reductase; Validated | 97.48 | |
| TIGR01318 | 467 | gltD_gamma_fam glutamate synthase small subunit fa | 97.47 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.47 | |
| PRK12861 | 764 | malic enzyme; Reviewed | 97.47 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.46 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 97.46 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 97.46 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.46 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 97.45 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 97.45 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.45 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 97.45 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.44 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 97.43 | |
| PRK09414 | 445 | glutamate dehydrogenase; Provisional | 97.42 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 97.41 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 97.4 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 97.4 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 97.4 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 97.4 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.4 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 97.39 | |
| PRK11730 | 715 | fadB multifunctional fatty acid oxidation complex | 97.39 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.39 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 97.38 | |
| PRK10637 | 457 | cysG siroheme synthase; Provisional | 97.38 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 97.38 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 97.38 | |
| TIGR02437 | 714 | FadB fatty oxidation complex, alpha subunit FadB. | 97.38 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.38 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.38 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 97.38 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 97.37 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 97.37 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 97.37 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.36 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.36 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 97.36 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.36 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.33 | |
| COG1648 | 210 | CysG Siroheme synthase (precorrin-2 oxidase/ferroc | 97.33 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 97.33 | |
| PRK14030 | 445 | glutamate dehydrogenase; Provisional | 97.33 | |
| COG0334 | 411 | GdhA Glutamate dehydrogenase/leucine dehydrogenase | 97.33 | |
| PRK12809 | 639 | putative oxidoreductase Fe-S binding subunit; Revi | 97.32 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 97.31 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.31 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 97.31 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.3 | |
| PRK12769 | 654 | putative oxidoreductase Fe-S binding subunit; Revi | 97.3 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 97.29 | |
| cd00762 | 254 | NAD_bind_malic_enz NAD(P) binding domain of malic | 97.29 | |
| TIGR02440 | 699 | FadJ fatty oxidation complex, alpha subunit FadJ. | 97.29 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 97.29 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.28 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 97.28 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.28 | |
| TIGR02441 | 737 | fa_ox_alpha_mit fatty acid oxidation complex, alph | 97.28 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 97.28 | |
| COG0281 | 432 | SfcA Malic enzyme [Energy production and conversio | 97.27 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 97.26 | |
| COG1250 | 307 | FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabo | 97.25 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.25 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.25 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.25 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 97.25 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 97.25 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 97.24 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 97.24 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 97.23 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 97.23 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 97.23 | |
| TIGR01546 | 333 | GAPDH-II_archae glyceraldehyde-3-phosphate dehydro | 97.23 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 97.23 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.23 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.23 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 97.22 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 97.22 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 97.22 | |
| PF03949 | 255 | Malic_M: Malic enzyme, NAD binding domain; InterPr | 97.2 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.19 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 97.19 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.18 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.18 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 97.18 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 97.17 | |
| PRK06928 | 277 | pyrroline-5-carboxylate reductase; Reviewed | 97.17 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 97.17 | |
| PRK11154 | 708 | fadJ multifunctional fatty acid oxidation complex | 97.16 | |
| PRK06199 | 379 | ornithine cyclodeaminase; Validated | 97.16 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.15 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 97.15 | |
| PRK13301 | 267 | putative L-aspartate dehydrogenase; Provisional | 97.14 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 97.13 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 97.12 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 97.12 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 97.1 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 97.1 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.1 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.1 | |
| PRK12557 | 342 | H(2)-dependent methylenetetrahydromethanopterin de | 97.08 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.08 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.03 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 97.03 | |
| COG3288 | 356 | PntA NAD/NADP transhydrogenase alpha subunit [Ener | 97.02 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.99 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 96.99 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.99 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 96.98 | |
| PRK01390 | 460 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.98 |
| >COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-59 Score=411.89 Aligned_cols=240 Identities=45% Similarity=0.675 Sum_probs=228.6
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
+++.++|+.|+|+||++||++|.+.|.|.|| ||.+|++|||.|||++|.|++++|+++..++||+|+|.|||++|
T Consensus 142 l~~~i~G~tEETTTGV~RL~am~~~G~L~fPai~VNDs~tK~~FDNrYGtgqS~~DgI~RaTn~liaGK~vVV~GYG~vG 221 (420)
T COG0499 142 LLDAIKGGTEETTTGVHRLRAMEKDGVLKFPAINVNDSVTKSLFDNRYGTGQSLLDGILRATNVLLAGKNVVVAGYGWVG 221 (420)
T ss_pred HHHHhcCCCcccchHHHHHHHHHhcCCcccceEeecchhhhcccccccccchhHHHHHHhhhceeecCceEEEecccccc
Confidence 4577999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+++|++|+..||+|+|+|.||-++.+|..+||++.+.+++.+.+|++++|||+++++..+.|..||+++++.|+|+++.|
T Consensus 222 rG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~TGnkdVi~~eh~~~MkDgaIl~N~GHFd~E 301 (420)
T COG0499 222 RGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTATGNKDVIRKEHFEKMKDGAILANAGHFDVE 301 (420)
T ss_pred hHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEccCCcCccCHHHHHhccCCeEEeccccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
||...+... .+...++++++..|.+++++ .+.+|++||+|||+++.|||+||||+|||+|+
T Consensus 302 I~~~~L~~~-~~~~~~vr~~V~ey~l~~Gk-ri~llaeGRLvNLa~a~GHPs~VMd~SFanQaLa~~~L~~n~~~~~~~V 379 (420)
T COG0499 302 IDVAGLEEL-AVEKREVRPQVDEYELPDGK-RIILLAEGRLVNLAAATGHPSEVMDMSFANQALAQIYLVKNHGKLEPGV 379 (420)
T ss_pred ccHHHHHHh-hhhHhccccCceEEEcCCCC-EEEEEecceeeeeccCCCCcHHHhhhhHHHHHHHHHHHHhcccccCCce
Confidence 999998742 23446778899999999988 69999999999999999999999999999999
Q ss_pred -----------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||+++|++|+.||+||+.||.
T Consensus 380 y~lP~~lD~~VArl~L~~~G~~i~~Lt~eQ~~Yl~ 414 (420)
T COG0499 380 YRLPKELDEEVARLKLEAMGIELDELTEEQAEYLG 414 (420)
T ss_pred eeCcHHHHHHHHHHHHHHhCceeeecCHHHHHHhC
Confidence 999999999999999999999984
|
|
| >KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-59 Score=403.96 Aligned_cols=239 Identities=57% Similarity=0.860 Sum_probs=231.0
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
|+++++|++|+|+||+|||++|.+.|+|.+| ||++|..|||.|+|+++++++++|+++.++.||.++|.|||.+|
T Consensus 147 ~~~~i~GiseEttTGVH~Lykm~k~G~L~VPAiNVNDSVTKsKFDnLygcreSl~DgikraTDvM~aGKv~Vv~GYGdVG 226 (434)
T KOG1370|consen 147 MFKKIRGISEETTTGVHNLYKMSKNGKLKVPAINVNDSVTKSKFDNLYGCRESLLDGIKRATDVMIAGKVAVVCGYGDVG 226 (434)
T ss_pred HHhhhcccchhhhhhHHHHHHHHhCCceecceeeccchhhhhhccccccchhhhhhhhhhhhhheecccEEEEeccCccc
Confidence 5778999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
.++|+.||.+|++|+|+++||..+.+|..+|+++++++++++.+|+++++||++.++..+.|+.||.+++|.|+|+++.|
T Consensus 227 KgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc~dii~~~H~~~mk~d~IvCN~Ghfd~E 306 (434)
T KOG1370|consen 227 KGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGCKDIITGEHFDQMKNDAIVCNIGHFDTE 306 (434)
T ss_pred hhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCCcchhhHHHHHhCcCCcEEeccccccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
||..+|.. ++++...+++++++|.|++++ .|.+|++||+||++|.+|||+||||+||++|+
T Consensus 307 iDv~~L~~-~~~~~~~vk~QvD~~~~~~gr-~iIlLAeGRLvNL~CatghpSFvmS~sftnQvlAqIeLwt~p~~kY~~~ 384 (434)
T KOG1370|consen 307 IDVKWLNT-PALTWENVKPQVDRYILPNGK-HIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTAPEGKYKVG 384 (434)
T ss_pred eehhhccC-CcceeeecccccceeeccCCc-EEEEEecCceeecccccCCCceEEecchHHHHHHHHHHhcCCCCccccc
Confidence 99999987 566777888899999999988 69999999999999999999999999999999
Q ss_pred ------------HHHhcCCCCCccccCCHHHHhhc
Q 037949 220 ------------AALHLGKPGDKFRKLTPEQAACI 242 (243)
Q Consensus 220 ------------~~~~l~~~~~~~~~~~~~~~~~~ 242 (243)
|++||+|+|+|||+||++|++||
T Consensus 385 V~~LPKklDE~VA~lHL~kl~~kLTkLt~~Qa~Yl 419 (434)
T KOG1370|consen 385 VYVLPKKLDEYVASLHLGKLGAKLTKLTDKQAKYL 419 (434)
T ss_pred eEecchhhHHHHHHhhhhhhchhhhhhhHHHHHhc
Confidence 99999999999999999999998
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-54 Score=396.66 Aligned_cols=241 Identities=76% Similarity=1.134 Sum_probs=225.0
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
++++++|++|+|+||++||++|.++|.|+|| ||.+|+.|||.|||++++|++++|.++..+.|++|+|+|+|+||
T Consensus 187 ~~~~i~G~~EeTttGv~Rl~~m~~~g~L~~Pvi~vnds~~K~~fDn~yGtgqS~~d~i~r~t~i~LaGKtVvViGyG~IG 266 (477)
T PLN02494 187 MKERLVGVSEETTTGVKRLYQMQKNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVG 266 (477)
T ss_pred HHHhhcCCcccccHHHHHHHHHHHCCCCCCCEEEEcChhhhhhhhccccccccHHHHHHHhcCCccCCCEEEEECCCHHH
Confidence 4678999999999999999999999999999 99999999999999999999999998877899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|++++++|++|+++|+++.++..+...|+.+.+++++++.+|++++++|++++++.+.|+.||++++++|+|+++.+
T Consensus 267 r~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~e 346 (477)
T PLN02494 267 KGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNE 346 (477)
T ss_pred HHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCc
Confidence 99999999999999999999988778888898877788888899999999999999888899999999999999998888
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccC-chhhHHhhhcCCeecccCCCCCccccccchHHHHH----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQ-TRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA---------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~-~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~---------------- 219 (243)
||..+|...+++++.+++.+++.|.+++ ++ .+.+|++|++|||+|+.|||++|||+||++|+
T Consensus 347 ID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~-~i~ll~eGrlvNl~~~~GhP~evmd~sFa~Q~la~~~l~~~~~~~~~~ 425 (477)
T PLN02494 347 IDMLGLETYPGVKRITIKPQTDRWVFPDTGS-GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKKSGKYE 425 (477)
T ss_pred cCHHHHhhccccceeccCCCceEEEcCCCCC-EEEEEeCCccccccCCCCCCcceeeHHHHHHHHHHHHHHhcccccccC
Confidence 9999997632256677778899999998 88 79999999999999999999999999999999
Q ss_pred --------------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 --------------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 --------------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||..+|++|++||+||++||+
T Consensus 426 ~~v~~lP~~~D~~vA~~~L~~~g~~~~~lt~~Q~~yl~ 463 (477)
T PLN02494 426 KKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYIN 463 (477)
T ss_pred CCcEECCHHHHHHHHHHHHHHcCCccccCCHHHHHhcC
Confidence 999999999999999999999985
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-52 Score=381.76 Aligned_cols=240 Identities=44% Similarity=0.644 Sum_probs=222.2
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
++++++|++|+|+||++||++|.+.|.|+|| ||.+|+.|||.|+|+++.|+++++.++..++|++|+|+|+|+||
T Consensus 128 ~~~~~~G~~EeTttGv~rl~~~~~~~~L~~Pvi~vnds~~K~~fDn~yg~g~s~~~~i~r~t~~~l~Gk~VvViG~G~IG 207 (406)
T TIGR00936 128 LLEKIIGGSEETTTGVIRLRAMEAEGVLKFPAINVNDAYTKSLFDNRYGTGQSTIDGILRATNLLIAGKTVVVAGYGWCG 207 (406)
T ss_pred hhhccEEEeecchHHHHHHHHHHHcCCCCCcEEEecchhhchhhhcccccchhHHHHHHHhcCCCCCcCEEEEECCCHHH
Confidence 5678999999999999999999999999999 99999999999999999999999987767899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|+.++.+|++|+++|+++.+...+...|+.+.++++.++.+|++|+++|++++++.+.+..||+|++++|+|+++.+
T Consensus 208 ~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~e 287 (406)
T TIGR00936 208 KGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVE 287 (406)
T ss_pred HHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCce
Confidence 99999999999999999999998878888898877778888899999999999999987789999999999999999888
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
+|.+++... .....+++.+++.|.+++++ .+.+|++|+.|||+++.|||++|||+||++|+
T Consensus 288 Id~~aL~~~-~~~~~~~~~~v~~~~~~~g~-~i~ll~~GrlvNl~~~~ghp~~vmd~sfa~q~la~~~l~~~~~~~~~~v 365 (406)
T TIGR00936 288 IDVKALEEL-AVEKRNVRPQVDEYILKDGR-RIYLLAEGRLVNLAAAEGHPSEVMDMSFANQALAAEYLWKNHDKLEPGV 365 (406)
T ss_pred eCHHHHHHH-HhhccccccceEEEEeCCCC-EEEEEeCCceecccCCCCCcceeeCHHHHHHHHHHHHHHhcccccCCCe
Confidence 999998652 22334567788889999887 79999999999999999999999999999999
Q ss_pred -----------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||.++|+++++||+||++||+
T Consensus 366 ~~lp~~~d~~va~~~l~~~g~~~~~lt~~q~~y~~ 400 (406)
T TIGR00936 366 YRLPKELDEMVARLKLEAMGIEIDELTEEQKEYLG 400 (406)
T ss_pred EECCHHHHHHHHHHHHHHcCceeccCCHHHHHHhc
Confidence 999999999999999999999985
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-51 Score=377.70 Aligned_cols=240 Identities=51% Similarity=0.766 Sum_probs=223.4
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
++++++|++|+|+||++||++|.++|.+.|| ||.+|+.|||.|+|+++.|+++++..+..+.|++|+|+|+|+||
T Consensus 145 ~~~~i~G~~EeTttGv~rl~~~~~~~~l~~Pv~~vn~s~~K~~~dn~~gt~~s~~~ai~rat~~~l~Gk~VlViG~G~IG 224 (425)
T PRK05476 145 LLANIKGVTEETTTGVHRLYAMAKDGALKFPAINVNDSVTKSKFDNRYGTGESLLDGIKRATNVLIAGKVVVVAGYGDVG 224 (425)
T ss_pred hHhccEeeeecchHHHHHHHHHHHcCCCCCCEEecCCcccCccccccHHHHhhhHHHHHHhccCCCCCCEEEEECCCHHH
Confidence 5788999999999999999999999999999 99999999999999999999999886666899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|+.|+.+|++|+++|+++.+..++...|+++.+++++++++|+||+|+|++++++.+.+..||+|++++|+|+++.+
T Consensus 225 ~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~E 304 (425)
T PRK05476 225 KGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNE 304 (425)
T ss_pred HHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCc
Confidence 99999999999999999999998777777888877788888899999999999999987889999999999999999989
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
+|.+.+... .....++++++..|.+++++ .+.+|++|+.|||+++.|||.+|||+||++|+
T Consensus 305 id~~~L~~~-~~~~~~v~~~v~~y~~~~g~-~i~lLa~GrlvNl~~~~ghp~~vmd~sfa~q~l~~~~l~~~~~~~~~~v 382 (425)
T PRK05476 305 IDVAALEEL-AVKWREIKPQVDEYTLPDGK-RIILLAEGRLVNLGAATGHPSEVMDMSFANQALAQIELFTNRGKLEPGV 382 (425)
T ss_pred cChHHHhhc-CcceeecCCCceEEEeCCCC-EEEEEeCCcccccCCCCCCcceeeCHHHHHHHHHHHHHHhccCcCCCCe
Confidence 999998763 23456778889999999988 79999999999999999999999999999999
Q ss_pred -----------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||..+|++|++|||+|++||+
T Consensus 383 ~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~ 417 (425)
T PRK05476 383 YVLPKELDEEVARLKLKALGVKLDELTEEQAEYIG 417 (425)
T ss_pred EECCHHHHHHHHHHHHHHcCCccccCCHHHHHHcC
Confidence 999999999999999999999985
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-51 Score=377.43 Aligned_cols=241 Identities=61% Similarity=0.936 Sum_probs=222.2
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
|+++++|++|+|+||++||++|.++|.|.+| |+.+|..+|+.|+++.++++++.|..+..+.|++|+|+|+|+||
T Consensus 187 ~~~~i~G~~EeTttGv~rl~~m~~~g~L~iPV~nv~d~~tk~~aD~~~G~~~s~~d~~~R~~~~~LaGKtVgVIG~G~IG 266 (476)
T PTZ00075 187 LVKKIVGVSEETTTGVHRLYKMLKKGELLFPAINVNDSVTKSKFDNIYGCRHSLIDGIFRATDVMIAGKTVVVCGYGDVG 266 (476)
T ss_pred hhhccEeeeecchHHHHHHHHHHHCCCCCceEEEeCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHHH
Confidence 5788999999999999999999999999998 99999999999999999999999988878999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|++|+++|++|+++|+++.+...+...|+++.+++++++.+|+|+.|+|++++++.+.|+.||++++++|+|+++.+
T Consensus 267 r~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~d~E 346 (476)
T PTZ00075 267 KGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFDNE 346 (476)
T ss_pred HHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCCchH
Confidence 99999999999999999999988766777888877888889999999999999999998899999999999999999877
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
++.+.+.....+...++++++..|.+++++ .+.+|++|++|||+|+.|||++|||+||++|+
T Consensus 347 i~i~aL~~~~~vdv~evep~v~~~~~~~g~-~i~llaeGrlvNl~~~~GhP~~vMd~sfa~Q~la~~~l~~~~~~~~~~~ 425 (476)
T PTZ00075 347 IQVAELEAYPGIEIVEIKPQVDRYTFPDGK-GIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWENRDTGKYPN 425 (476)
T ss_pred HhHHHHHhcCCceeecccCCCCeEEeCCCC-EEEEEeCCCccccCCCCCCCeeEeeHHHHHHHHHHHHHHhccCccccCC
Confidence 888877653234556667778889999988 79999999999999999999999999999999
Q ss_pred -------------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -------------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -------------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||+++|++|++||++|++||+
T Consensus 426 ~v~~lp~~~d~~vA~~~L~~~g~~~~~lt~~q~~yl~ 462 (476)
T PTZ00075 426 GVYKLPKELDEKVARLHLKKLGAKLTKLTDKQAEYIG 462 (476)
T ss_pred ceEECCHHHHHHHHHHHHHHcCCccccCCHHHHHhcC
Confidence 999999999999999999999995
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-50 Score=370.58 Aligned_cols=240 Identities=57% Similarity=0.863 Sum_probs=219.9
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
++++++|++|+|+||++||++|.++|.|+|| ||.+|+.|||.|+|+++.|+++.+.++..++|++|+|+|+|+||
T Consensus 135 ~~~~~~G~~EeTttGv~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~g~s~~~~i~r~t~~~l~GktVvViG~G~IG 214 (413)
T cd00401 135 LLPGIRGISEETTTGVHRLYKMEKEGKLKFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVG 214 (413)
T ss_pred hhhccEEEeecchHHHHHHHHHHHCCCCCCCEEEecchhhcccccccchhchhhHHHHHHhcCCCCCCCEEEEECCCHHH
Confidence 5678999999999999999999999999999 99999999999999999999999988877899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+++.++.+|++|+++|+++.|+..|...|+++.+.++.+.++|+||+|+|++++++.+.++.|++|++++|+|+++.+
T Consensus 215 ~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~~e 294 (413)
T cd00401 215 KGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFDVE 294 (413)
T ss_pred HHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCCCc
Confidence 99999999999999999999999989999999777777788899999999999999987669999999999999999878
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
+|.+.+.. ++++..+.+.+...|.+++++ ++.+|++|++||+.+..|||++|||++|++|+
T Consensus 295 Id~~~L~~-~el~i~g~~~~~~~~~~~~g~-aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV 372 (413)
T cd00401 295 IDVKGLKE-NAVEVVNIKPQVDRYELPDGR-RIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGV 372 (413)
T ss_pred cCHHHHHh-hccEEEEccCCcceEEcCCcc-hhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcE
Confidence 99998876 355555555555556777656 89999999999999999999999999999888
Q ss_pred -----------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||..+|+++++||+||++||+
T Consensus 373 ~~~p~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~ 407 (413)
T cd00401 373 YFLPKKLDEEVARLHLGKLGVKLTKLTDKQAEYLG 407 (413)
T ss_pred EECCHHHHHHHHHHHHHhcCceeccCCHHHHHHhc
Confidence 999999999999999999999985
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=228.04 Aligned_cols=162 Identities=50% Similarity=0.746 Sum_probs=139.7
Q ss_pred hhhccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCc
Q 037949 42 NLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAG 121 (243)
Q Consensus 42 ~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aD 121 (243)
|.|+|++|++++++|.++..+.||+++|+|||++|+.+|+.|+++|++|+|+|+||.++.+|..+|+++.++++++..+|
T Consensus 1 N~yG~g~S~~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~ad 80 (162)
T PF00670_consen 1 NRYGTGQSLVDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDAD 80 (162)
T ss_dssp HHHHHHHHHHHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-S
T ss_pred CccccchhHHHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCC
Confidence 67999999999999999989999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeeccc
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLG 201 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~ 201 (243)
+++.+||++++++.+.|+.||+|+++.|+|+++.|||.+++... .+++.++++++..|.+++++ .+.+|++|++|||+
T Consensus 81 i~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~Eid~~~L~~~-~~~~~~v~~~v~~y~l~~G~-~i~lLa~GrlvNL~ 158 (162)
T PF00670_consen 81 IFVTATGNKDVITGEHFRQMKDGAILANAGHFDVEIDVDALEAN-AVEREEVRPQVDRYTLPDGR-RIILLAEGRLVNLA 158 (162)
T ss_dssp EEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTSBTHHHHHTC-TSEEEEEETTEEEEEETTSE-EEEEEGGGSBHHHH
T ss_pred EEEECCCCccccCHHHHHHhcCCeEEeccCcCceeEeecccccc-CcEEEEcCCCeeEEEeCCCC-EEEEEECCCEEeec
Confidence 99999999999998999999999999999999999999999873 45778888999999999988 79999999999999
Q ss_pred CCCC
Q 037949 202 CPTG 205 (243)
Q Consensus 202 s~~g 205 (243)
|..|
T Consensus 159 ~a~g 162 (162)
T PF00670_consen 159 AATG 162 (162)
T ss_dssp HS-S
T ss_pred CcCC
Confidence 8765
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.2e-16 Score=129.80 Aligned_cols=127 Identities=21% Similarity=0.218 Sum_probs=94.7
Q ss_pred hhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhh
Q 037949 37 TLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116 (243)
Q Consensus 37 k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~ 116 (243)
|+........+.+.|..-.......+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.........++...++++.
T Consensus 9 R~~~~~~~~~~~~~W~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~el 88 (178)
T PF02826_consen 9 RRLPEYHEAQRNGEWASRERFPGRELRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDEL 88 (178)
T ss_dssp TTHHHHHHHHHTTBHHHHTTTTBS-STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHH
T ss_pred hCHHHHHHHHHcCCCCCCcCCCccccCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhh
Confidence 44333333345555621122223468999999999999999999999999999999999987654345567667789999
Q ss_pred hcCCcEEEEccC----ChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 117 VSEAGLFVTTTE----NADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 117 ~~~aDvvi~a~G----~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
++.+|+|+.+.. +.++++.+.|+.||+|+++||+|+++ -+|.+++..
T Consensus 89 l~~aDiv~~~~plt~~T~~li~~~~l~~mk~ga~lvN~aRG~-~vde~aL~~ 139 (178)
T PF02826_consen 89 LAQADIVSLHLPLTPETRGLINAEFLAKMKPGAVLVNVARGE-LVDEDALLD 139 (178)
T ss_dssp HHH-SEEEE-SSSSTTTTTSBSHHHHHTSTTTEEEEESSSGG-GB-HHHHHH
T ss_pred cchhhhhhhhhccccccceeeeeeeeeccccceEEEeccchh-hhhhhHHHH
Confidence 999999998753 46889999999999999999999996 488888865
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3 | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.8e-18 Score=145.59 Aligned_cols=40 Identities=43% Similarity=0.610 Sum_probs=33.4
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFD 41 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~ 41 (243)
++++++|+.|+|+||++||++|.+.|.|.|| |+.+|++||
T Consensus 143 l~~~i~G~sEETTTGv~rL~am~~~g~L~~PviavNDa~tK~~FD 187 (268)
T PF05221_consen 143 LLSGIIGGSEETTTGVHRLRAMEKEGKLKFPVIAVNDAVTKHLFD 187 (268)
T ss_dssp HHHT-SEEEE-SHHHHHHHHHHHHTT---SEEEESTTSHHHHTTH
T ss_pred hhhheEEecccccccchhhhhhhhhcccCCCeeEecchhhHhhcC
Confidence 5788999999999999999999999999999 999999998
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D .... |
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.3e-16 Score=139.30 Aligned_cols=145 Identities=17% Similarity=0.163 Sum_probs=116.7
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcccC-------HHh---hh-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVLT-------RED---VV- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~~-------~~~---~~- 117 (243)
.|||.+++. ...|.+|+|+|+||||+.+..+++++|| +|+++|.++.|++.|++.|++++. +++ .+
T Consensus 158 ~~HAcr~~~--vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~ 235 (354)
T KOG0024|consen 158 GVHACRRAG--VKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVE 235 (354)
T ss_pred hhhhhhhcC--cccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHH
Confidence 579998875 5789999999999999999999999999 899999999999999999987432 121 11
Q ss_pred -----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh
Q 037949 118 -----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL 192 (243)
Q Consensus 118 -----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll 192 (243)
...|+.|+|+|....++. ++..++.+|.++.+|.+...++++.+... .+|+.+++ +.+|...++..+|+++
T Consensus 236 ~~~g~~~~d~~~dCsG~~~~~~a-ai~a~r~gGt~vlvg~g~~~~~fpi~~v~--~kE~~~~g-~fry~~~~y~~ai~li 311 (354)
T KOG0024|consen 236 KALGKKQPDVTFDCSGAEVTIRA-AIKATRSGGTVVLVGMGAEEIQFPIIDVA--LKEVDLRG-SFRYCNGDYPTAIELV 311 (354)
T ss_pred hhccccCCCeEEEccCchHHHHH-HHHHhccCCEEEEeccCCCccccChhhhh--hheeeeee-eeeeccccHHHHHHHH
Confidence 249999999999888874 78999999999999998766666555431 35666654 6677765655599999
Q ss_pred hcCCeeccc
Q 037949 193 AERLLMNLG 201 (243)
Q Consensus 193 ~~G~ivNl~ 201 (243)
++|+| |+.
T Consensus 312 ~sGki-~~k 319 (354)
T KOG0024|consen 312 SSGKI-DVK 319 (354)
T ss_pred HcCCc-Cch
Confidence 99998 766
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-14 Score=130.88 Aligned_cols=148 Identities=16% Similarity=0.139 Sum_probs=108.1
Q ss_pred hCHHHHHHHHHcCC--CCCc----hhHHhhHHHhhh-----------ccccchhhhhh---hhccccccCcEEEEEcCCh
Q 037949 15 MGVKRLYQMQANGT--LLFS----EETTTLLFDNLY-----------GFRHSLPDGLM---RATDITIAGKIAVDCGHGD 74 (243)
Q Consensus 15 tG~~~~~~~~~~~~--l~~p----~s~~k~~~~~~~-----------~~~~~~~~av~---~~~~~~l~g~~vlViG~G~ 74 (243)
....+++.+.++|+ .++| +++..+.+.-.+ .++++-|.... ...+..+.||+++|+|.|.
T Consensus 77 ~D~vDl~aa~~~gI~Vtnvp~~~t~sVAe~~~aLiLa~~R~~~~~~~~~r~g~w~~~~~~~~~~~~~l~gktvGIiG~Gr 156 (324)
T COG1052 77 YDNVDLEAAKERGITVTNVPGYSTEAVAEHAVALILALARRIHEGDRRVREGNWSLSGGPDPLLGFDLRGKTLGIIGLGR 156 (324)
T ss_pred cCcccHHHHHHCCcEEEeCCCCCchHHHHHHHHHHHHHhhchHHHHHHHhcCcccccCCcccccccCCCCCEEEEECCCH
Confidence 45667899999988 4566 444333332222 23333232210 0112357899999999999
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHHHHccCCCCeEEEEe
Q 037949 75 VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 75 IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~~l~~l~~g~~vvnv 150 (243)
||+.+|++++++|++|+.+|+++. .......++...++++.++.+|+++.+++ +.++|+.+.|+.||+++++||+
T Consensus 157 IG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLin~~~l~~mk~ga~lVNt 235 (324)
T COG1052 157 IGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLINAEELAKMKPGAILVNT 235 (324)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhcCHHHHHhCCCCeEEEEC
Confidence 999999999999999999999886 22333445666669999999999987643 4678999999999999999999
Q ss_pred cCCCCCCChhHHHH
Q 037949 151 GHFDNEIDMLDLEA 164 (243)
Q Consensus 151 g~~~~~id~~~l~~ 164 (243)
||++. +|.+++..
T Consensus 236 aRG~~-VDe~ALi~ 248 (324)
T COG1052 236 ARGGL-VDEQALID 248 (324)
T ss_pred CCccc-cCHHHHHH
Confidence 99974 88888865
|
|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.8e-15 Score=131.81 Aligned_cols=116 Identities=26% Similarity=0.286 Sum_probs=90.9
Q ss_pred cccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-cccCHHhhhcCCcEEE
Q 037949 46 FRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-PVLTREDVVSEAGLFV 124 (243)
Q Consensus 46 ~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~~~~~~~~~~~aDvvi 124 (243)
.+++.|.. ....+..+.|||++|+|+|.||+.+|++++++|++|+++|+...+. .+...+. ...++++.+..+|+++
T Consensus 125 ~~~g~W~~-~~~~g~el~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~-~~~~~~~~~~~~Ld~lL~~sDiv~ 202 (324)
T COG0111 125 QRRGEWDR-KAFRGTELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRE-RAGVDGVVGVDSLDELLAEADILT 202 (324)
T ss_pred HHcCCccc-cccccccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCCCchh-hhccccceecccHHHHHhhCCEEE
Confidence 34555554 1122336789999999999999999999999999999999843332 2333343 3566899999999999
Q ss_pred EccC----ChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 125 TTTE----NADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 125 ~a~G----~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.++. +.++++.+.|..||+|+++||++|+.. +|.++|..
T Consensus 203 lh~PlT~eT~g~i~~~~~a~MK~gailIN~aRG~v-Vde~aL~~ 245 (324)
T COG0111 203 LHLPLTPETRGLINAEELAKMKPGAILINAARGGV-VDEDALLA 245 (324)
T ss_pred EcCCCCcchhcccCHHHHhhCCCCeEEEECCCcce-ecHHHHHH
Confidence 8753 578899999999999999999999974 88888865
|
|
| >PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.4e-14 Score=126.35 Aligned_cols=102 Identities=15% Similarity=0.107 Sum_probs=85.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHH-hCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALK-AVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~-~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
.+.|++++|+|+|.||+.+|++++ ++|++|+++|+..... .....+....++++.++.+|+|+.+.. +.++++.
T Consensus 142 ~L~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~~-~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li~~ 220 (323)
T PRK15409 142 DVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKE-AEERFNARYCDLDTLLQESDFVCIILPLTDETHHLFGA 220 (323)
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCchh-hHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhccCH
Confidence 589999999999999999999998 9999999998764321 223345555688999999999988753 5678999
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|+.||+++++||+||++. +|.++|..
T Consensus 221 ~~l~~mk~ga~lIN~aRG~v-Vde~AL~~ 248 (323)
T PRK15409 221 EQFAKMKSSAIFINAGRGPV-VDENALIA 248 (323)
T ss_pred HHHhcCCCCeEEEECCCccc-cCHHHHHH
Confidence 99999999999999999974 88888865
|
|
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.4e-14 Score=128.09 Aligned_cols=131 Identities=18% Similarity=0.218 Sum_probs=98.8
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-cCCccc-CH-H--------hhh--cCCcEEEEcc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-EGIPVL-TR-E--------DVV--SEAGLFVTTT 127 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~G~~~~-~~-~--------~~~--~~aDvvi~a~ 127 (243)
..+.+|+|+|+||||+.+++.++.+|+ +|+++|+++.|++.|++ .|.+++ +. + +.. .++|++|+|+
T Consensus 167 ~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~ 246 (350)
T COG1063 167 RPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAV 246 (350)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECC
Confidence 455599999999999999999999998 78889999999999988 566532 22 1 111 2599999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCCCC---CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFDNE---IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~~~---id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
|++.+++ +.++.++++|.++.+|.+..+ ++...+.. +++++......+...++.++++++++|++
T Consensus 247 G~~~~~~-~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~----kel~l~gs~~~~~~~~~~~~~~ll~~g~i 314 (350)
T COG1063 247 GSPPALD-QALEALRPGGTVVVVGVYGGEDIPLPAGLVVS----KELTLRGSLRPSGREDFERALDLLASGKI 314 (350)
T ss_pred CCHHHHH-HHHHHhcCCCEEEEEeccCCccCccCHHHHHh----cccEEEeccCCCCcccHHHHHHHHHcCCC
Confidence 9988886 589999999999999998533 44545544 44556543222333344448999999998
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.5e-14 Score=124.95 Aligned_cols=99 Identities=22% Similarity=0.295 Sum_probs=84.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.||+++|+|+|.||+.+|++++++|++|+++|+.... ...++...+++++++.+|+|+.++. +.++++.+
T Consensus 142 ~L~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~----~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~ 217 (311)
T PRK08410 142 EIKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKN----KNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYK 217 (311)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCccc----cccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHH
Confidence 589999999999999999999999999999999886432 1234555678999999999988753 56889999
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+++++||+||++. +|.++|..
T Consensus 218 ~~~~Mk~~a~lIN~aRG~v-VDe~AL~~ 244 (311)
T PRK08410 218 ELKLLKDGAILINVGRGGI-VNEKDLAK 244 (311)
T ss_pred HHHhCCCCeEEEECCCccc-cCHHHHHH
Confidence 9999999999999999974 89888865
|
|
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.3e-13 Score=122.52 Aligned_cols=97 Identities=21% Similarity=0.247 Sum_probs=82.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.||+++|+|+|.||+.+|++++++|++|+++|+.... ...+..++++.++.+|+|+.+.. +.++++.+
T Consensus 145 ~l~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~~~~------~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~ 218 (317)
T PRK06487 145 ELEGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLPGRP------ARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGAR 218 (317)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCCc------ccccccCHHHHHHhCCEEEECCCCChHHhcCcCHH
Confidence 589999999999999999999999999999999875321 12234578899999999998753 57889999
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+|+++||+||++. +|.++|..
T Consensus 219 ~~~~mk~ga~lIN~aRG~v-Vde~AL~~ 245 (317)
T PRK06487 219 ELALMKPGALLINTARGGL-VDEQALAD 245 (317)
T ss_pred HHhcCCCCeEEEECCCccc-cCHHHHHH
Confidence 9999999999999999974 88888865
|
|
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.2e-13 Score=119.55 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=82.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++|+|+|+|.||+.+|++++++|++|+++|+.+... . .....++++++..+|+|+.+.. +.++++.+
T Consensus 144 ~l~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~~---~--~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~ 218 (314)
T PRK06932 144 DVRGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGASV---C--REGYTPFEEVLKQADIVTLHCPLTETTQNLINAE 218 (314)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCcccc---c--ccccCCHHHHHHhCCEEEEcCCCChHHhcccCHH
Confidence 5789999999999999999999999999999998654211 1 1123578899999999998753 56789999
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+|+++||+||+.. +|.++|..
T Consensus 219 ~l~~mk~ga~lIN~aRG~~-Vde~AL~~ 245 (314)
T PRK06932 219 TLALMKPTAFLINTGRGPL-VDEQALLD 245 (314)
T ss_pred HHHhCCCCeEEEECCCccc-cCHHHHHH
Confidence 9999999999999999974 88888865
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.8e-13 Score=122.53 Aligned_cols=103 Identities=14% Similarity=0.152 Sum_probs=85.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
.+.|++|+|+|+|.||+.+|++|+++|++|+++|+++.........|+. ..+++++++.+|+|+.+.. +.++++.
T Consensus 189 ~L~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~ 268 (385)
T PRK07574 189 DLEGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLFDA 268 (385)
T ss_pred ecCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHhCH
Confidence 5899999999999999999999999999999999876433233344554 3578899999999998864 4577998
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|..||+|+++||+||+. -+|.++|..
T Consensus 269 ~~l~~mk~ga~lIN~aRG~-iVDe~AL~~ 296 (385)
T PRK07574 269 DVLSRMKRGSYLVNTARGK-IVDRDAVVR 296 (385)
T ss_pred HHHhcCCCCcEEEECCCCc-hhhHHHHHH
Confidence 8999999999999999997 478888765
|
|
| >PLN02306 hydroxypyruvate reductase | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.9e-13 Score=122.17 Aligned_cols=103 Identities=18% Similarity=0.221 Sum_probs=82.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHH-hCCCEEEEEeCCchhHHHH--hhcC------------Cc-ccCHHhhhcCCcEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALK-AVGARVMGTEIDLICALQA--LTEG------------IP-VLTREDVVSEAGLFV 124 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~-~~Ga~V~v~d~~~~r~~~a--~~~G------------~~-~~~~~~~~~~aDvvi 124 (243)
.+.|++|+|+|+|.||+.+|++++ ++|++|+++|+.+...... ...| .. ..+++++++.+|+|+
T Consensus 162 ~L~gktvGIiG~G~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV~ 241 (386)
T PLN02306 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVIS 241 (386)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEEE
Confidence 589999999999999999999985 9999999999875421111 1111 11 236888899999998
Q ss_pred Ecc----CChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 125 TTT----ENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 125 ~a~----G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.++ .+.++++.+.|+.||+|+++||+||++. +|.++|..
T Consensus 242 lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~l-VDe~AL~~ 284 (386)
T PLN02306 242 LHPVLDKTTYHLINKERLALMKKEAVLVNASRGPV-IDEVALVE 284 (386)
T ss_pred EeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccc-cCHHHHHH
Confidence 864 3567899999999999999999999974 78888865
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=99.46 E-value=6e-13 Score=121.15 Aligned_cols=103 Identities=22% Similarity=0.247 Sum_probs=83.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH------------hhcCCcccCHHhhhcCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA------------LTEGIPVLTREDVVSEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a------------~~~G~~~~~~~~~~~~aDvvi~a~G 128 (243)
.+.|++++|+|+|.||+.+|+.|+++|++|+++|++..+.... ...+....++++++..+|+|+.++.
T Consensus 156 ~l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 156 TLFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 5789999999999999999999999999999999874321111 0011234567888999999998853
Q ss_pred ----ChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 129 ----NADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 129 ----~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++++.+.|+.||+|+++||+||++ -+|.++|..
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaRG~-lVde~AL~~ 274 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIARGG-LLDYDAVLA 274 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCCcc-ccCHHHHHH
Confidence 56789999999999999999999997 488888865
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.6e-13 Score=122.59 Aligned_cols=103 Identities=15% Similarity=0.190 Sum_probs=86.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
.+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.........|+.. .++++++..+|+|+.++. +.++++.
T Consensus 196 ~L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~ 275 (386)
T PLN03139 196 DLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFNK 275 (386)
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHhCH
Confidence 58999999999999999999999999999999998754333333456543 478899999999998864 4677998
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|+.||+|+++||+|++. -+|.+++..
T Consensus 276 ~~l~~mk~ga~lIN~aRG~-iVDe~AL~~ 303 (386)
T PLN03139 276 ERIAKMKKGVLIVNNARGA-IMDTQAVAD 303 (386)
T ss_pred HHHhhCCCCeEEEECCCCc-hhhHHHHHH
Confidence 8999999999999999997 478888865
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.44 E-value=1e-12 Score=119.04 Aligned_cols=102 Identities=21% Similarity=0.213 Sum_probs=86.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+|+.++++|++|+++|+++... .....|+...++++.++.+|+|+.|+. +.++++.+
T Consensus 147 ~L~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~~~ 225 (333)
T PRK13243 147 DVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMINEE 225 (333)
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccCHH
Confidence 5799999999999999999999999999999999876543 333445555678888999999998864 35788888
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+|++++|+|++. .+|.+++..
T Consensus 226 ~~~~mk~ga~lIN~aRg~-~vd~~aL~~ 252 (333)
T PRK13243 226 RLKLMKPTAILVNTARGK-VVDTKALVK 252 (333)
T ss_pred HHhcCCCCeEEEECcCch-hcCHHHHHH
Confidence 999999999999999997 478888865
|
|
| >KOG0068 consensus D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.2e-13 Score=119.12 Aligned_cols=142 Identities=16% Similarity=0.170 Sum_probs=108.9
Q ss_pred HHHHHHcCC--CCCc---------------hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHH
Q 037949 20 LYQMQANGT--LLFS---------------EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAA 82 (243)
Q Consensus 20 ~~~~~~~~~--l~~p---------------~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~ 82 (243)
+++..++|. .+.| -|+.|+..+.....+++-|.-.... +..+.|||+.|+|+|.||..+|.+
T Consensus 86 L~AAte~gi~Vvn~P~~Ns~saAEltigli~SLaR~i~~A~~s~k~g~wnr~~~~-G~el~GKTLgvlG~GrIGseVA~r 164 (406)
T KOG0068|consen 86 LKAATENGILVVNTPTANSRSAAELTIGLILSLARQIGQASASMKEGKWNRVKYL-GWELRGKTLGVLGLGRIGSEVAVR 164 (406)
T ss_pred hhhHHhCCeEEEeCCCCChHHHHHHHHHHHHHHhhhcchhheeeecCceeeccee-eeEEeccEEEEeecccchHHHHHH
Confidence 677777777 4456 2333333333444555556543322 346899999999999999999999
Q ss_pred HHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEcc----CChhcccHHHHccCCCCeEEEEecCCCCCCC
Q 037949 83 LKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTT----ENADIIMVRHMKQMKNAAIVCNIGHFDNEID 158 (243)
Q Consensus 83 l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~----G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id 158 (243)
++.+|++|+.+|+-... .++...|++.+++++++..||++..++ .+.++++.+.|..||+|.++||++|++. +|
T Consensus 165 ~k~~gm~vI~~dpi~~~-~~~~a~gvq~vsl~Eil~~ADFitlH~PLtP~T~~lin~~tfA~mKkGVriIN~aRGGv-VD 242 (406)
T KOG0068|consen 165 AKAMGMHVIGYDPITPM-ALAEAFGVQLVSLEEILPKADFITLHVPLTPSTEKLLNDETFAKMKKGVRIINVARGGV-VD 242 (406)
T ss_pred HHhcCceEEeecCCCch-HHHHhccceeeeHHHHHhhcCEEEEccCCCcchhhccCHHHHHHhhCCcEEEEecCCce-ec
Confidence 99999999999875443 356677889999999999999997764 3567899999999999999999999974 88
Q ss_pred hhHHHH
Q 037949 159 MLDLEA 164 (243)
Q Consensus 159 ~~~l~~ 164 (243)
.+++..
T Consensus 243 e~ALv~ 248 (406)
T KOG0068|consen 243 EPALVR 248 (406)
T ss_pred hHHHHH
Confidence 888865
|
|
| >PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-12 Score=121.98 Aligned_cols=100 Identities=19% Similarity=0.233 Sum_probs=83.1
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccC----Chhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
..+.||+++|+|+|.||+.+|+.++++|++|+++|+.+... ..++. +.++++.++.+|+|+.+.. +.++++
T Consensus 147 ~~L~gktvGIiG~G~IG~~vA~~~~~fGm~V~~~d~~~~~~----~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~ 222 (409)
T PRK11790 147 FEVRGKTLGIVGYGHIGTQLSVLAESLGMRVYFYDIEDKLP----LGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIG 222 (409)
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCcccc----cCCceecCCHHHHHhhCCEEEEcCCCChHHhhccC
Confidence 35899999999999999999999999999999999764321 12233 3478999999999988754 567899
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.|+.||+|++++|+||+.. +|.++|..
T Consensus 223 ~~~l~~mk~ga~lIN~aRG~~-vde~aL~~ 251 (409)
T PRK11790 223 AEELALMKPGAILINASRGTV-VDIDALAD 251 (409)
T ss_pred HHHHhcCCCCeEEEECCCCcc-cCHHHHHH
Confidence 999999999999999999974 78888755
|
|
| >PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.3e-12 Score=118.17 Aligned_cols=101 Identities=19% Similarity=0.208 Sum_probs=82.9
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC--------Ch
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE--------NA 130 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G--------~~ 130 (243)
+..+.|++|+|+|+|.||+.+|++|+++|++|+++|+... . ........++++.++.+|+|+.++. +.
T Consensus 111 g~~L~gktvGIIG~G~IG~~vA~~l~a~G~~V~~~dp~~~--~--~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~~T~ 186 (378)
T PRK15438 111 GFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRA--D--RGDEGDFRSLDELVQEADILTFHTPLFKDGPYKTL 186 (378)
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCccc--c--cccccccCCHHHHHhhCCEEEEeCCCCCCcccccc
Confidence 3468999999999999999999999999999999986322 1 1112234578899999999987753 56
Q ss_pred hcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
++++.+.|+.||+|+++||+||++. +|.++|..
T Consensus 187 ~li~~~~l~~mk~gailIN~aRG~v-VDe~AL~~ 219 (378)
T PRK15438 187 HLADEKLIRSLKPGAILINACRGAV-VDNTALLT 219 (378)
T ss_pred cccCHHHHhcCCCCcEEEECCCchh-cCHHHHHH
Confidence 7899999999999999999999974 89888865
|
|
| >KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.1e-12 Score=114.82 Aligned_cols=149 Identities=16% Similarity=0.152 Sum_probs=107.9
Q ss_pred hCHHHHHHHHHcCC--CCCc----hhHHhhHH-------Hhhhc----cccchh-hhhhhhccccccCcEEEEEcCChHH
Q 037949 15 MGVKRLYQMQANGT--LLFS----EETTTLLF-------DNLYG----FRHSLP-DGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 15 tG~~~~~~~~~~~~--l~~p----~s~~k~~~-------~~~~~----~~~~~~-~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
....+++++.++|+ -++| ++...... .+..+ ...+-| .......+..+.||+|+|+|+|.||
T Consensus 95 ~D~vDl~a~~krgI~V~nvp~~~~~~vAd~~~~lil~~~R~~~~g~~~~~~g~w~~~~~~~~g~~~~gK~vgilG~G~IG 174 (336)
T KOG0069|consen 95 YDHVDLEAARKRGIRVANVPDVLTDDVADLAVSLLLALLRRFSEGNEMVRNGGWGWAGGWPLGYDLEGKTVGILGLGRIG 174 (336)
T ss_pred cchhhHHHHHhcCceEeccCCcchHHHHHHHHHHHHHHHhhhhhhhhhhhcCCccccCCccccccccCCEEEEecCcHHH
Confidence 56788999999988 5567 33222221 11111 112223 1111111235789999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEcc-C---ChhcccHHHHccCCCCeEEEEecC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTT-E---NADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~-G---~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
..+|++|++||+.+..+.+.+.+.+.+...+.+..+.++.+..+|+++.|. . +.++++.+.|..||+++++||+++
T Consensus 175 ~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~liNk~~~~~mk~g~vlVN~aR 254 (336)
T KOG0069|consen 175 KAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLINKKFIEKMKDGAVLVNTAR 254 (336)
T ss_pred HHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHhhHHHHHhcCCCeEEEeccc
Confidence 999999999997788888877776666666666778889999999998764 3 457899999999999999999999
Q ss_pred CCCCCChhHHHH
Q 037949 153 FDNEIDMLDLEA 164 (243)
Q Consensus 153 ~~~~id~~~l~~ 164 (243)
++. +|.+++..
T Consensus 255 G~i-ide~~l~e 265 (336)
T KOG0069|consen 255 GAI-IDEEALVE 265 (336)
T ss_pred ccc-ccHHHHHH
Confidence 974 77777754
|
|
| >TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.2e-12 Score=121.50 Aligned_cols=153 Identities=18% Similarity=0.190 Sum_probs=107.0
Q ss_pred eeecchhCHHH--HHHHHHcCC--CCCc----hhHHhhHHH-----------hhhccccchhhhhhhhccccccCcEEEE
Q 037949 9 VSEETTMGVKR--LYQMQANGT--LLFS----EETTTLLFD-----------NLYGFRHSLPDGLMRATDITIAGKIAVD 69 (243)
Q Consensus 9 ~~E~T~tG~~~--~~~~~~~~~--l~~p----~s~~k~~~~-----------~~~~~~~~~~~av~~~~~~~l~g~~vlV 69 (243)
++=.+.+|+.. ++.+.++|. .+.| .++..+.+. .....+++-|..-. ..+..+.||+++|
T Consensus 65 ~I~~~~~G~d~id~~~~~~~gI~V~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~-~~g~~l~gktvgI 143 (525)
T TIGR01327 65 VIGRAGVGVDNIDIEAATARGILVVNAPTGNTISAAEHALAMLLAAARNIPQADASLKEGEWDRKA-FMGTELYGKTLGV 143 (525)
T ss_pred EEEECCcccchhcHHHHHHCCCEEEeCCCcChHHHHHHHHHHHHHHhcCHHHHHHHHHcCCccccc-cCccccCCCEEEE
Confidence 34455566654 677888887 4556 333222222 11122333343210 0123589999999
Q ss_pred EcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-CHHhhhcCCcEEEEccC----ChhcccHHHHccCCCC
Q 037949 70 CGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-TREDVVSEAGLFVTTTE----NADIIMVRHMKQMKNA 144 (243)
Q Consensus 70 iG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G----~~~~i~~~~l~~l~~g 144 (243)
+|+|.||+.+|++++++|++|+++|+.... ..+...|+... ++++.++.+|+|+.|.. +.++++.+.|+.||++
T Consensus 144 iG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~g 222 (525)
T TIGR01327 144 IGLGRIGSIVAKRAKAFGMKVLAYDPYISP-ERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLIGAEELAKMKKG 222 (525)
T ss_pred ECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCcCHHHHhcCCCC
Confidence 999999999999999999999999985332 23445566543 68889999999998864 4678988899999999
Q ss_pred eEEEEecCCCCCCChhHHHH
Q 037949 145 AIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 145 ~~vvnvg~~~~~id~~~l~~ 164 (243)
++++|+|+++. +|.++|..
T Consensus 223 a~lIN~aRG~~-vde~aL~~ 241 (525)
T TIGR01327 223 VIIVNCARGGI-IDEAALYE 241 (525)
T ss_pred eEEEEcCCCce-eCHHHHHH
Confidence 99999999973 78877754
|
This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli. |
| >PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.1e-12 Score=121.58 Aligned_cols=102 Identities=21% Similarity=0.263 Sum_probs=86.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+|++++++|++|+++|+...+ ..+...|+...++++.++.+|+|+.|+. +.++++.+
T Consensus 137 ~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~~~ 215 (526)
T PRK13581 137 ELYGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP-ERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIGAE 215 (526)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcCHH
Confidence 578999999999999999999999999999999986432 2344567665588899999999998864 45789888
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||++++++|+|+++ -+|.+++..
T Consensus 216 ~l~~mk~ga~lIN~aRG~-~vde~aL~~ 242 (526)
T PRK13581 216 ELAKMKPGVRIINCARGG-IIDEAALAE 242 (526)
T ss_pred HHhcCCCCeEEEECCCCc-eeCHHHHHH
Confidence 999999999999999997 378887754
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.9e-12 Score=116.34 Aligned_cols=102 Identities=15% Similarity=0.032 Sum_probs=81.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.+...... -....+++++++++|+|+.+.. +.++++.+
T Consensus 133 ~l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~-~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~~~ 211 (312)
T PRK15469 133 HREDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQS-FAGREELSAFLSQTRVLINLLPNTPETVGIINQQ 211 (312)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCcee-ecccccHHHHHhcCCEEEECCCCCHHHHHHhHHH
Confidence 578999999999999999999999999999999986643210000 0112357888999999998864 45678888
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+|+++||+||++. +|.++|..
T Consensus 212 ~l~~mk~ga~lIN~aRG~v-Vde~aL~~ 238 (312)
T PRK15469 212 LLEQLPDGAYLLNLARGVH-VVEDDLLA 238 (312)
T ss_pred HHhcCCCCcEEEECCCccc-cCHHHHHH
Confidence 9999999999999999974 88888865
|
|
| >PRK00257 erythronate-4-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.2e-12 Score=115.61 Aligned_cols=101 Identities=16% Similarity=0.186 Sum_probs=83.3
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC--------Ch
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE--------NA 130 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G--------~~ 130 (243)
+..+.|++|+|+|+|.||+.+|+.++++|++|+++|+..... ..+....++++.++++|+|+.++. +.
T Consensus 111 g~~l~gktvGIIG~G~IG~~va~~l~a~G~~V~~~Dp~~~~~----~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~~T~ 186 (381)
T PRK00257 111 GVDLAERTYGVVGAGHVGGRLVRVLRGLGWKVLVCDPPRQEA----EGDGDFVSLERILEECDVISLHTPLTKEGEHPTR 186 (381)
T ss_pred CCCcCcCEEEEECCCHHHHHHHHHHHHCCCEEEEECCccccc----ccCccccCHHHHHhhCCEEEEeCcCCCCcccccc
Confidence 346899999999999999999999999999999998743311 122345678888899999988753 45
Q ss_pred hcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
++++.+.|+.||+|+++||+|+++. +|.++|..
T Consensus 187 ~li~~~~l~~mk~gailIN~aRG~v-Vde~AL~~ 219 (381)
T PRK00257 187 HLLDEAFLASLRPGAWLINASRGAV-VDNQALRE 219 (381)
T ss_pred ccCCHHHHhcCCCCeEEEECCCCcc-cCHHHHHH
Confidence 7899999999999999999999974 88888865
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.4e-12 Score=112.86 Aligned_cols=98 Identities=18% Similarity=0.294 Sum_probs=82.4
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc--ccCHHhhhcCCcEEEEccC----Chhcc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP--VLTREDVVSEAGLFVTTTE----NADII 133 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~--~~~~~~~~~~aDvvi~a~G----~~~~i 133 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|++... .+.. ..++++.++.+|+|+.+.. +.+++
T Consensus 118 ~~L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~------~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li 191 (303)
T PRK06436 118 KLLYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN------DGISSIYMEPEDIMKKSDFVLISLPLTDETRGMI 191 (303)
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc------cCcccccCCHHHHHhhCCEEEECCCCCchhhcCc
Confidence 3689999999999999999999999999999999987432 2322 3468888899999998864 46778
Q ss_pred cHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 134 MVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.+.|+.||+|+++||+|+++ .+|.+++..
T Consensus 192 ~~~~l~~mk~ga~lIN~sRG~-~vd~~aL~~ 221 (303)
T PRK06436 192 NSKMLSLFRKGLAIINVARAD-VVDKNDMLN 221 (303)
T ss_pred CHHHHhcCCCCeEEEECCCcc-ccCHHHHHH
Confidence 888999999999999999997 478888865
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.5e-11 Score=108.91 Aligned_cols=99 Identities=16% Similarity=0.183 Sum_probs=82.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCC----hhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTEN----ADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~----~~~i~~ 135 (243)
.+.|++|+|+|+|.||+.+|+.++++|++|+++|+++...... .. ..+++++++.+|+|+.|... .+.++.
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~----~~~~~~l~ell~~aDiVil~lP~t~~t~~li~~ 218 (330)
T PRK12480 143 PVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF----LTYKDSVKEAIKDADIISLHVPANKESYHLFDK 218 (330)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh----hhccCCHHHHHhcCCEEEEeCCCcHHHHHHHhH
Confidence 5799999999999999999999999999999999987543211 12 23678888999999988653 366888
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.|++|+++||+|++. .+|.+++..
T Consensus 219 ~~l~~mk~gavlIN~aRG~-~vd~~aL~~ 246 (330)
T PRK12480 219 AMFDHVKKGAILVNAARGA-VINTPDLIA 246 (330)
T ss_pred HHHhcCCCCcEEEEcCCcc-ccCHHHHHH
Confidence 8899999999999999997 488888865
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.6e-11 Score=110.65 Aligned_cols=147 Identities=18% Similarity=0.124 Sum_probs=108.4
Q ss_pred hhccccc-hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH--H---h
Q 037949 43 LYGFRHS-LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR--E---D 115 (243)
Q Consensus 43 ~~~~~~~-~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~--~---~ 115 (243)
++.|+.. .+++++++. ..+|++|+|+|+|+.|...++.++++|++|+++|+++.+++.|+++|++ +++. . +
T Consensus 147 pllCaGiT~y~alk~~~--~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~ 224 (339)
T COG1064 147 PLLCAGITTYRALKKAN--VKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALE 224 (339)
T ss_pred hhhcCeeeEeeehhhcC--CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhH
Confidence 4445543 467887753 4689999999999999999999999999999999999999999999986 3321 1 1
Q ss_pred hh-cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC-CC---CChhHHHHhhcCeEEEeecCeeeeEccCchhhHH
Q 037949 116 VV-SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD-NE---IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGII 190 (243)
Q Consensus 116 ~~-~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~-~~---id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ 190 (243)
.+ +.+|+++++++ +..++ ..++.++++|+++.+|..+ .+ ++...+.. +++.+.+ +......+.+++++
T Consensus 225 ~~~~~~d~ii~tv~-~~~~~-~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~----~~~~i~G-S~~g~~~d~~e~l~ 297 (339)
T COG1064 225 AVKEIADAIIDTVG-PATLE-PSLKALRRGGTLVLVGLPGGGPIPLLPAFLLIL----KEISIVG-SLVGTRADLEEALD 297 (339)
T ss_pred HhHhhCcEEEECCC-hhhHH-HHHHHHhcCCEEEEECCCCCcccCCCCHHHhhh----cCeEEEE-EecCCHHHHHHHHH
Confidence 22 23999999999 88887 4899999999999999884 22 33443433 3455543 22233444344788
Q ss_pred hhhcCCee
Q 037949 191 ILAERLLM 198 (243)
Q Consensus 191 ll~~G~iv 198 (243)
+.++|.|.
T Consensus 298 f~~~g~Ik 305 (339)
T COG1064 298 FAAEGKIK 305 (339)
T ss_pred HHHhCCce
Confidence 88999884
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=99.27 E-value=7e-11 Score=105.00 Aligned_cols=119 Identities=18% Similarity=0.194 Sum_probs=90.1
Q ss_pred ccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC---HHhhhcCCc
Q 037949 45 GFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT---REDVVSEAG 121 (243)
Q Consensus 45 ~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~---~~~~~~~aD 121 (243)
.+.++.+....+..+..+.|++++|+|+|.||+.+|+.|+.+|++|+++++++.+...+...|+...+ +.+.+.++|
T Consensus 132 ~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~aD 211 (287)
T TIGR02853 132 PTAEGAIMMAIEHTDFTIHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEID 211 (287)
T ss_pred hHHHHHHHHHHHhcCCCCCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccCC
Confidence 34444343222223446889999999999999999999999999999999998876666666665333 456678999
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+|+.|++.. +++.+.++.|+++++++|++..+...|+.....
T Consensus 212 iVint~P~~-ii~~~~l~~~k~~aliIDlas~Pg~tdf~~Ak~ 253 (287)
T TIGR02853 212 IVINTIPAL-VLTADVLSKLPKHAVIIDLASKPGGTDFEYAKK 253 (287)
T ss_pred EEEECCChH-HhCHHHHhcCCCCeEEEEeCcCCCCCCHHHHHH
Confidence 999997543 566778999999999999999876677754433
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1e-10 Score=105.70 Aligned_cols=139 Identities=17% Similarity=0.208 Sum_probs=100.6
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh---cC
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDVV---SE 119 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~---~~ 119 (243)
.++++.+.. ..+|++|+|+|+|++|+.+++.++.+|+ +|+++|.++.+++.+.+.|++ +++ ..+.. .+
T Consensus 158 a~~al~~~~--~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~ 235 (343)
T PRK09880 158 AIHAAHQAG--DLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGY 235 (343)
T ss_pred HHHHHHhcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCC
Confidence 367776543 3479999999999999999999999999 689999999999888888975 333 22222 13
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+|++++|+|.+..+. ..++.++++|+++.+|... .+++...+.. +++.+.. +..+ ..+..++++++++|++
T Consensus 236 ~D~vid~~G~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----k~~~i~g-~~~~-~~~~~~~~~l~~~g~i 308 (343)
T PRK09880 236 FDVSFEVSGHPSSIN-TCLEVTRAKGVMVQVGMGGAPPEFPMMTLIV----KEISLKG-SFRF-TEEFNTAVSWLANGVI 308 (343)
T ss_pred CCEEEECCCCHHHHH-HHHHHhhcCCEEEEEccCCCCCccCHHHHHh----CCcEEEE-Eeec-cccHHHHHHHHHcCCC
Confidence 899999999877665 5799999999999999754 3455544433 2333432 2112 1234447899999986
|
|
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.2e-11 Score=104.70 Aligned_cols=138 Identities=16% Similarity=0.158 Sum_probs=99.0
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH---Hhhh------c
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR---EDVV------S 118 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~---~~~~------~ 118 (243)
.++++.+.. ..+|++|+|+|+|+||+.+++.++.+|++ |+++|.++.|+..+.+.|++ +++. .+.+ .
T Consensus 109 a~~al~~~~--~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~ 186 (280)
T TIGR03366 109 VMAALEAAG--DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQGGLQNGR 186 (280)
T ss_pred HHHHHHhcc--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHHHHhCCC
Confidence 355665443 24899999999999999999999999996 88899999998888888875 3332 1111 2
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhc
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAE 194 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~ 194 (243)
++|++++|+|.+..++ ..++.++++|+++.+|... .+++...+.. +++.+.. +..+...+..++++++++
T Consensus 187 g~d~vid~~G~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~~l~~ 260 (280)
T TIGR03366 187 GVDVALEFSGATAAVR-ACLESLDVGGTAVLAGSVFPGGPVALDPEQVVR----RWLTIRG-VHNYEPRHLDQAVRFLAA 260 (280)
T ss_pred CCCEEEECCCChHHHH-HHHHHhcCCCEEEEeccCCCCCceeeCHHHHHh----CCcEEEe-cCCCCHHHHHHHHHHHHh
Confidence 6899999999888776 4799999999999999642 2456655544 3344433 222222333448899987
Q ss_pred C
Q 037949 195 R 195 (243)
Q Consensus 195 G 195 (243)
+
T Consensus 261 ~ 261 (280)
T TIGR03366 261 N 261 (280)
T ss_pred h
Confidence 5
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.6e-11 Score=113.38 Aligned_cols=92 Identities=20% Similarity=0.227 Sum_probs=77.2
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc--cCH---------------Hh---------
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV--LTR---------------ED--------- 115 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~--~~~---------------~~--------- 115 (243)
.++++|+|+|+|+||+.+++.++.+|++|+++|+++.|++++...|++. ++. ++
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~ 242 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALF 242 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999888762 211 01
Q ss_pred --hhcCCcEEEEccCCh-----hcccHHHHccCCCCeEEEEecCC
Q 037949 116 --VVSEAGLFVTTTENA-----DIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 116 --~~~~aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++++|++|+|+|.+ .++.+++++.||+|++++.+|..
T Consensus 243 ~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 243 AEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence 124799999999864 35556799999999999999974
|
|
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=99.22 E-value=8.7e-11 Score=104.80 Aligned_cols=138 Identities=15% Similarity=0.143 Sum_probs=95.2
Q ss_pred chhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCcccCHHh-hhcCCcEEEEc
Q 037949 49 SLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIPVLTRED-VVSEAGLFVTT 126 (243)
Q Consensus 49 ~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~~~~~~~-~~~~aDvvi~a 126 (243)
..|+++.+. ..+|++++|+|+|+||+.+++.++.+|++ |+++|.++.|+..+... .+++..+ .-.++|++|+|
T Consensus 133 ~a~~~~~~~---~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~--~~i~~~~~~~~g~Dvvid~ 207 (308)
T TIGR01202 133 TARHAVAGA---EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY--EVLDPEKDPRRDYRAIYDA 207 (308)
T ss_pred HHHHHHHhc---ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc--cccChhhccCCCCCEEEEC
Confidence 346777553 23689999999999999999999999996 66678888887655443 2333322 22468999999
Q ss_pred cCChhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 127 TENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+|.+..++ ..++.++++|+++.+|.... +++...+.. +++++.. +..+...+++++++++++|++
T Consensus 208 ~G~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----~~~~i~~-~~~~~~~~~~~~~~l~~~g~i 274 (308)
T TIGR01202 208 SGDPSLID-TLVRRLAKGGEIVLAGFYTEPVNFDFVPAFM----KEARLRI-AAEWQPGDLHAVRELIESGAL 274 (308)
T ss_pred CCCHHHHH-HHHHhhhcCcEEEEEeecCCCcccccchhhh----cceEEEE-ecccchhHHHHHHHHHHcCCC
Confidence 99987775 57999999999999997642 344333332 3333432 212222334448899999987
|
|
| >PRK08605 D-lactate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.2e-10 Score=103.77 Aligned_cols=100 Identities=19% Similarity=0.164 Sum_probs=80.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHH-HhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccC----Chhccc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAAL-KAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l-~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
.+.|++|+|+|+|.||+.+|+.+ +++|++|+++|+++.... ..++. +.+++++++++|+|+.|+. +..+++
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~~---~~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~li~ 219 (332)
T PRK08605 143 SIKDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAKA---ATYVDYKDTIEEAVEGADIVTLHMPATKYNHYLFN 219 (332)
T ss_pred eeCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccHhH---HhhccccCCHHHHHHhCCEEEEeCCCCcchhhhcC
Confidence 57899999999999999999999 789999999998765421 12233 2368888999999998864 345677
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.++.|+++++++|++++. .+|.+++..
T Consensus 220 ~~~l~~mk~gailIN~sRG~-~vd~~aL~~ 248 (332)
T PRK08605 220 ADLFKHFKKGAVFVNCARGS-LVDTKALLD 248 (332)
T ss_pred HHHHhcCCCCcEEEECCCCc-ccCHHHHHH
Confidence 77799999999999999986 478877755
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.6e-10 Score=100.85 Aligned_cols=100 Identities=20% Similarity=0.238 Sum_probs=82.6
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC---HHhhhcCCcEEEEccCChhcccHH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT---REDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~---~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
..+.|++|+|+|+|.+|+.++..|+.+|++|+++|+++.+...+...|++... +.+.+.++|+||+|++. .+++.+
T Consensus 148 ~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aDiVI~t~p~-~~i~~~ 226 (296)
T PRK08306 148 ITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKIDIIFNTIPA-LVLTKE 226 (296)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCCEEEECCCh-hhhhHH
Confidence 35689999999999999999999999999999999998877777777876443 45667899999999764 456677
Q ss_pred HHccCCCCeEEEEecCCCCCCChh
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDML 160 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~ 160 (243)
.++.|++++++++++..+...|+.
T Consensus 227 ~l~~~~~g~vIIDla~~pggtd~~ 250 (296)
T PRK08306 227 VLSKMPPEALIIDLASKPGGTDFE 250 (296)
T ss_pred HHHcCCCCcEEEEEccCCCCcCee
Confidence 899999999999999875445543
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.13 E-value=6e-10 Score=102.36 Aligned_cols=141 Identities=14% Similarity=0.089 Sum_probs=96.2
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcCCc-ccCH------HhhhcCCcE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEGIP-VLTR------EDVVSEAGL 122 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~-~~~~------~~~~~~aDv 122 (243)
|+++.+......+|++|+|.|+|+||+.+++.++.+|++|++++.++.+ .+.+...|++ +++. .+...++|+
T Consensus 166 ~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D~ 245 (375)
T PLN02178 166 YSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDF 245 (375)
T ss_pred HHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCcE
Confidence 4555433211247999999999999999999999999999998877554 4555667875 3321 112246899
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+++|+|.+..++ ..++.++++|+++.+|... .+++...+.. ++..+.. +..+...+..+++.++++|++
T Consensus 246 vid~~G~~~~~~-~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~l~~~g~i 316 (375)
T PLN02178 246 IIDTVSAEHALL-PLFSLLKVSGKLVALGLPEKPLDLPIFPLVL----GRKMVGG-SQIGGMKETQEMLEFCAKHKI 316 (375)
T ss_pred EEECCCcHHHHH-HHHHhhcCCCEEEEEccCCCCCccCHHHHHh----CCeEEEE-eCccCHHHHHHHHHHHHhCCC
Confidence 999999887665 4789999999999999754 2355554433 3344432 211222333448899999987
|
|
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.13 E-value=6e-10 Score=100.75 Aligned_cols=139 Identities=12% Similarity=0.030 Sum_probs=93.1
Q ss_pred hhhhhhhc-cccccCcEEEEEcCChHHHHHHHHHHh-CC-CEEEEEeCCchhHHHHhhcCCcccCHHhhh--cCCcEEEE
Q 037949 51 PDGLMRAT-DITIAGKIAVDCGHGDVGRGCAAALKA-VG-ARVMGTEIDLICALQALTEGIPVLTREDVV--SEAGLFVT 125 (243)
Q Consensus 51 ~~av~~~~-~~~l~g~~vlViG~G~IG~~~A~~l~~-~G-a~V~v~d~~~~r~~~a~~~G~~~~~~~~~~--~~aDvvi~ 125 (243)
++++.+.. ....+|++|+|+|+|+||+.+++.++. .| ++|+++|+++.|++.+...+.... .++.. .++|++++
T Consensus 150 ~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~-~~~~~~~~g~d~viD 228 (341)
T cd08237 150 VHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYL-IDDIPEDLAVDHAFE 228 (341)
T ss_pred HHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceee-hhhhhhccCCcEEEE
Confidence 46664321 113579999999999999999999885 65 589999999998877766554321 11211 25899999
Q ss_pred ccC---ChhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCC
Q 037949 126 TTE---NADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERL 196 (243)
Q Consensus 126 a~G---~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ 196 (243)
|+| ++..++ +.++.++++|+++.+|.... +++...+.. +++.+.. +..+...+..++++++++|.
T Consensus 229 ~~G~~~~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----k~~~i~g-~~~~~~~~~~~~~~~~~~~~ 298 (341)
T cd08237 229 CVGGRGSQSAIN-QIIDYIRPQGTIGLMGVSEYPVPINTRMVLE----KGLTLVG-SSRSTREDFERAVELLSRNP 298 (341)
T ss_pred CCCCCccHHHHH-HHHHhCcCCcEEEEEeecCCCcccCHHHHhh----CceEEEE-ecccCHHHHHHHHHHHHhCC
Confidence 999 455675 57999999999999997542 345444433 3344433 21222233344789999883
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.5e-10 Score=100.11 Aligned_cols=141 Identities=13% Similarity=0.036 Sum_probs=100.0
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHh-hhcCCcEEEEcc
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRED-VVSEAGLFVTTT 127 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~-~~~~aDvvi~a~ 127 (243)
.|+++.+. . ..+|++|+|.|+|++|+.+++.++.+|++|++++.++.+++.+++.|++ +++..+ .-...|++++++
T Consensus 154 a~~~~~~~-~-~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~~~~~d~~i~~~ 231 (329)
T TIGR02822 154 GYRALLRA-S-LPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTPPEPLDAAILFA 231 (329)
T ss_pred HHHHHHhc-C-CCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccCcccceEEEECC
Confidence 36666543 2 4579999999999999999999999999999999999999889999986 343222 123579999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCC-C--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCee
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHF-D--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLM 198 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~-~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~iv 198 (243)
+....+. ..++.++++|+++.+|.. . ..++...+.. ++..+.. +..+...+..++++++++|++-
T Consensus 232 ~~~~~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~l~~~g~i~ 299 (329)
T TIGR02822 232 PAGGLVP-PALEALDRGGVLAVAGIHLTDTPPLNYQRHLF----YERQIRS-VTSNTRADAREFLELAAQHGVR 299 (329)
T ss_pred CcHHHHH-HHHHhhCCCcEEEEEeccCccCCCCCHHHHhh----CCcEEEE-eecCCHHHHHHHHHHHHhCCCe
Confidence 8877775 579999999999999974 2 2355444333 2233432 1111222333367889999873
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.4e-10 Score=98.69 Aligned_cols=110 Identities=17% Similarity=0.245 Sum_probs=88.9
Q ss_pred hhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCHHh----------hhc-C
Q 037949 53 GLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTRED----------VVS-E 119 (243)
Q Consensus 53 av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~~~----------~~~-~ 119 (243)
++.++.. ..+|++|+|+|.|.||+++.+.++..|| +|+.+|+++.+++.|++.|+. +++..+ ... +
T Consensus 176 av~nta~-v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~~vv~~i~~~T~gG 254 (366)
T COG1062 176 AVVNTAK-VEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTDGG 254 (366)
T ss_pred Hhhhccc-CCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhhhHHHHHHHhcCCC
Confidence 3444333 4689999999999999999999999999 899999999999999999984 444321 223 8
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHH
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEA 164 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~ 164 (243)
+|.+|+|+|+.+.+. ++++..+++|.++.+|..+ .+++++....
T Consensus 255 ~d~~~e~~G~~~~~~-~al~~~~~~G~~v~iGv~~~~~~i~~~~~~l 300 (366)
T COG1062 255 ADYAFECVGNVEVMR-QALEATHRGGTSVIIGVAGAGQEISTRPFQL 300 (366)
T ss_pred CCEEEEccCCHHHHH-HHHHHHhcCCeEEEEecCCCCceeecChHHe
Confidence 999999999999886 5799999999999999875 4566555443
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.6e-09 Score=98.78 Aligned_cols=140 Identities=15% Similarity=0.073 Sum_probs=94.3
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHH-HHhhcCCc-ccCH------HhhhcCCcE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICAL-QALTEGIP-VLTR------EDVVSEAGL 122 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~-~a~~~G~~-~~~~------~~~~~~aDv 122 (243)
|+++.+... ..+|++|+|.|+|+||+.+++.++.+|++|++++.++.+.. .+...|++ +++. .+...++|+
T Consensus 172 ~~al~~~~~-~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~D~ 250 (360)
T PLN02586 172 YSPMKYYGM-TEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTMDY 250 (360)
T ss_pred HHHHHHhcc-cCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCCCE
Confidence 455543321 34799999999999999999999999999988887766543 34467874 3321 112236899
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+++++|....++ +.++.++++|+++.+|... .+++...+.. ++..+.. +..+...+..++++++++|++
T Consensus 251 vid~~g~~~~~~-~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~li~~g~i 321 (360)
T PLN02586 251 IIDTVSAVHALG-PLLGLLKVNGKLITLGLPEKPLELPIFPLVL----GRKLVGG-SDIGGIKETQEMLDFCAKHNI 321 (360)
T ss_pred EEECCCCHHHHH-HHHHHhcCCcEEEEeCCCCCCCccCHHHHHh----CCeEEEE-cCcCCHHHHHHHHHHHHhCCC
Confidence 999999877675 4799999999999999753 3455544433 2233322 111122233448899999987
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.6e-09 Score=98.09 Aligned_cols=139 Identities=14% Similarity=0.091 Sum_probs=96.1
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH-----Hh---hh----
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR-----ED---VV---- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~---~~---- 117 (243)
++++.+. . ..+|++|+|.|+|+||+.+++.++.+|++|++++.++.++..+...|++ +++. ++ .+
T Consensus 156 ~~a~~~~-~-~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t 233 (349)
T TIGR03201 156 YQAAVQA-G-LKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA 233 (349)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc
Confidence 4455432 2 3579999999999999999999999999999999999998888888874 2221 11 11
Q ss_pred --cCCc----EEEEccCChhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhH
Q 037949 118 --SEAG----LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGI 189 (243)
Q Consensus 118 --~~aD----vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai 189 (243)
.+.| ++++|+|+...++ ..++.++++|+++.+|.... .++...+.. ++..+.. ...+...++++++
T Consensus 234 ~~~g~d~~~d~v~d~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----~~~~~~g-~~~~~~~~~~~~~ 307 (349)
T TIGR03201 234 KARGLRSTGWKIFECSGSKPGQE-SALSLLSHGGTLVVVGYTMAKTEYRLSNLMA----FHARALG-NWGCPPDRYPAAL 307 (349)
T ss_pred ccCCCCCCcCEEEECCCChHHHH-HHHHHHhcCCeEEEECcCCCCcccCHHHHhh----cccEEEE-EecCCHHHHHHHH
Confidence 1344 8999999987765 47899999999999997642 344443333 1122322 1111222344478
Q ss_pred HhhhcCCe
Q 037949 190 IILAERLL 197 (243)
Q Consensus 190 ~ll~~G~i 197 (243)
+++++|++
T Consensus 308 ~~i~~g~i 315 (349)
T TIGR03201 308 DLVLDGKI 315 (349)
T ss_pred HHHHcCCC
Confidence 99999986
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.5e-09 Score=98.36 Aligned_cols=130 Identities=16% Similarity=0.087 Sum_probs=91.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC---CchhHHHHhhcCCcccCH-----Hh--hhcCCcEEEEccCChh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI---DLICALQALTEGIPVLTR-----ED--VVSEAGLFVTTTENAD 131 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~---~~~r~~~a~~~G~~~~~~-----~~--~~~~aDvvi~a~G~~~ 131 (243)
.+|++|+|+|+|+||+.+++.++..|++|+++++ ++.+++.+.+.|++.++. .+ ...++|++|+|+|.+.
T Consensus 171 ~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 250 (355)
T cd08230 171 WNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVPP 250 (355)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCHH
Confidence 4799999999999999999999999999999987 677877788888764321 11 1236899999999877
Q ss_pred cccHHHHccCCCCeEEEEecCCCC--CCChh------HHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFDN--EIDML------DLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~~--~id~~------~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
.++ +.++.++++|+++.+|.... .++.+ .+.. +++.+.... .....+..+++.++.++++
T Consensus 251 ~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~----k~~~i~g~~-~~~~~~~~~~~~~l~~~~~ 318 (355)
T cd08230 251 LAF-EALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVL----GNKALVGSV-NANKRHFEQAVEDLAQWKY 318 (355)
T ss_pred HHH-HHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhh----cCcEEEEec-CCchhhHHHHHHHHHhccc
Confidence 665 57999999999999997542 22222 2222 333443321 1222344447888888763
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.6e-09 Score=97.05 Aligned_cols=93 Identities=17% Similarity=0.191 Sum_probs=76.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCC---hhcccHHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTEN---ADIIMVRH 137 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~---~~~i~~~~ 137 (243)
.++||+|+|||+|.||+.+|+.|+.+|++|+++++.......+...|+.+.+++++++.+|+|+.+... .++++.+.
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~ei 92 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAEV 92 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHHH
Confidence 478999999999999999999999999999999765444445666788777899999999999988653 45676678
Q ss_pred HccCCCCeEEEEecCC
Q 037949 138 MKQMKNAAIVCNIGHF 153 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~ 153 (243)
++.|++|++++...-+
T Consensus 93 l~~MK~GaiL~f~hgf 108 (335)
T PRK13403 93 EENLREGQMLLFSHGF 108 (335)
T ss_pred HhcCCCCCEEEECCCc
Confidence 9999999988875433
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.2e-09 Score=94.52 Aligned_cols=140 Identities=19% Similarity=0.200 Sum_probs=96.9
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH-----H---hhh--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR-----E---DVV-- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~-----~---~~~-- 117 (243)
.|+++.+.. ..+|++|+|+|+|+||+.+++.++.+|++ |++++.++.+...+...|++ +++. + +..
T Consensus 152 a~~~l~~~~--~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~ 229 (339)
T cd08239 152 AYHALRRVG--VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSG 229 (339)
T ss_pred HHHHHHhcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCC
Confidence 456665442 35799999999999999999999999998 99999999988888778874 3221 1 112
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC-CCCChh-HHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD-NEIDML-DLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAER 195 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~-~~id~~-~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G 195 (243)
.++|++++|+|....+. ..++.++++|+++.+|... ..++.. .+.. ++..+.. ...+...+..+++.++.+|
T Consensus 230 ~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~~~~~g 303 (339)
T cd08239 230 AGADVAIECSGNTAARR-LALEAVRPWGRLVLVGEGGELTIEVSNDLIR----KQRTLIG-SWYFSVPDMEECAEFLARH 303 (339)
T ss_pred CCCCEEEECCCCHHHHH-HHHHHhhcCCEEEEEcCCCCcccCcHHHHHh----CCCEEEE-EecCCHHHHHHHHHHHHcC
Confidence 26899999999887664 4789999999999998754 223322 2222 2233322 1112222344478899998
Q ss_pred Ce
Q 037949 196 LL 197 (243)
Q Consensus 196 ~i 197 (243)
.+
T Consensus 304 ~i 305 (339)
T cd08239 304 KL 305 (339)
T ss_pred CC
Confidence 76
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.5e-10 Score=86.69 Aligned_cols=115 Identities=18% Similarity=0.239 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hhc--CCcEEEEccCChhcccHHHHccC
Q 037949 74 DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VVS--EAGLFVTTTENADIIMVRHMKQM 141 (243)
Q Consensus 74 ~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~~--~aDvvi~a~G~~~~i~~~~l~~l 141 (243)
+||+.+++.++..|++|+++|.++.+++.+++.|++ +++ +.+ ... ++|++|+|+|+...++ ..++.+
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~-~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQ-EAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHH-HHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHH-HHHHHh
Confidence 699999999999999999999999999889999975 222 222 222 5999999999988886 589999
Q ss_pred CCCeEEEEecCCC-CC--CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhc
Q 037949 142 KNAAIVCNIGHFD-NE--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAE 194 (243)
Q Consensus 142 ~~g~~vvnvg~~~-~~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~ 194 (243)
+++|+++.+|... .. ++...+.. +++.+.+ +..+...++++++++|++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMF----KEITIRG-SWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHH----TTEEEEE-ESSGGHHHHHHHHHHHH-
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHh----CCcEEEE-EccCCHHHHHHHHHHhcC
Confidence 9999999999885 33 44444444 3344543 222233344447777754
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.8e-09 Score=95.81 Aligned_cols=132 Identities=16% Similarity=0.121 Sum_probs=93.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----Hhhh-----cCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----EDVV-----SEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~~~-----~~aDvvi~a~G 128 (243)
..+|++|+|.|+|+||+.+++.++.+|+ +|+++|.++.+++.+...|++ +++. .+.+ .++|++++|+|
T Consensus 189 i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G 268 (371)
T cd08281 189 VRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAG 268 (371)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCC
Confidence 3579999999999999999999999999 699999999998888888875 3321 1111 25899999999
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC--C--CCChhHHHHhhcCeEEEeecCeee--eEccCchhhHHhhhcCCe
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD--N--EIDMLDLEAYRGIKRITIKPQTDP--WVFPQTRRGIIILAERLL 197 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~--~--~id~~~l~~~~~~~~~~i~~~~~~--~~~~~~~~ai~ll~~G~i 197 (243)
....+. ..++.++++|+++.+|... . .++...+.. +++.+...... +...+..++++++++|++
T Consensus 269 ~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~----~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i 338 (371)
T cd08281 269 SVPALE-TAYEITRRGGTTVTAGLPDPEARLSVPALSLVA----EERTLKGSYMGSCVPRRDIPRYLALYLSGRL 338 (371)
T ss_pred ChHHHH-HHHHHHhcCCEEEEEccCCCCceeeecHHHHhh----cCCEEEEEecCCCChHHHHHHHHHHHHcCCC
Confidence 877775 4789999999999999753 1 234333333 22333321111 111223337789999987
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.3e-09 Score=95.58 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=92.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----Hh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----ED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~----~~--~~aDvvi~a~ 127 (243)
..+|++|+|.|+|+||+.+++.++.+|+ +|+++|.++.++..+...|++ +++. .+ .. .++|++++|+
T Consensus 174 ~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~ 253 (358)
T TIGR03451 174 VKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAV 253 (358)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 3579999999999999999999999999 599999999998888888874 3321 11 11 2589999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCCC--CCChh--HHHHhhcCeEEEeecCeee--eEccCchhhHHhhhcCCe
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDML--DLEAYRGIKRITIKPQTDP--WVFPQTRRGIIILAERLL 197 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~--~l~~~~~~~~~~i~~~~~~--~~~~~~~~ai~ll~~G~i 197 (243)
|++..++ ..+..++++|+++.+|.... .++.+ .+.. ++..+...... +...+..++++++++|++
T Consensus 254 g~~~~~~-~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l 324 (358)
T TIGR03451 254 GRPETYK-QAFYARDLAGTVVLVGVPTPDMTLELPLLDVFG----RGGALKSSWYGDCLPERDFPMLVDLYLQGRL 324 (358)
T ss_pred CCHHHHH-HHHHHhccCCEEEEECCCCCCceeeccHHHHhh----cCCEEEEeecCCCCcHHHHHHHHHHHHcCCC
Confidence 9877775 47899999999999997632 23333 2322 22333321110 111223336788999976
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.1e-09 Score=95.16 Aligned_cols=133 Identities=14% Similarity=0.189 Sum_probs=92.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-------HHhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-------REDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-------~~~~~-----~~aDvvi~a 126 (243)
..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.+...|++ +++ ..+.+ .++|+++++
T Consensus 196 ~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~ 275 (381)
T PLN02740 196 VQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFEC 275 (381)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 4689999999999999999999999999 699999999999888888874 332 11211 159999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCCCC--CCChhHHHHhhcCeEEEeecCee-eeE-ccCchhhHHhhhcCCe
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTD-PWV-FPQTRRGIIILAERLL 197 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~-~~~-~~~~~~ai~ll~~G~i 197 (243)
+|.+..+. +.+..++++ |+++.+|.... .+++.....+ ++.++..... .+. ..+..++++++.+|++
T Consensus 276 ~G~~~~~~-~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~---~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i 347 (381)
T PLN02740 276 AGNVEVLR-EAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF---DGRSITGSVFGDFKGKSQLPNLAKQCMQGVV 347 (381)
T ss_pred CCChHHHH-HHHHhhhcCCCEEEEEccCCCCceecccHHHHh---cCCeEEEEecCCCCcHHHHHHHHHHHHcCCC
Confidence 99887776 578888886 99999997642 2343333221 2233322111 111 1123336788888976
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.97 E-value=3e-09 Score=100.94 Aligned_cols=92 Identities=17% Similarity=0.222 Sum_probs=76.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C--------------------------H
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T--------------------------R 113 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~--------------------------~ 113 (243)
.++.+|+|+|+|++|+..++.++.+|++|+++|.++.+++.+...|++.+ + .
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~ 241 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF 241 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999888887776531 1 1
Q ss_pred HhhhcCCcEEEEcc---CC--hhcccHHHHccCCCCeEEEEecCC
Q 037949 114 EDVVSEAGLFVTTT---EN--ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 114 ~~~~~~aDvvi~a~---G~--~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+..+++|++|+|+ |. |.+++.++++.||+|+++++++..
T Consensus 242 ~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 242 AAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 12346899999998 54 446888899999999999998764
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.6e-09 Score=92.50 Aligned_cols=100 Identities=22% Similarity=0.253 Sum_probs=82.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCC-cccCHHh-------hh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGI-PVLTRED-------VV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~-~~~~~~~-------~~-----~~aDvvi~a 126 (243)
..+|++++|+|.|.+|+++++-+|+.|| +++.+|+|+.+.+.|...|+ +.+++.| .+ -+.|+-|||
T Consensus 190 v~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc 269 (375)
T KOG0022|consen 190 VEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFEC 269 (375)
T ss_pred cCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEe
Confidence 4689999999999999999999999999 89999999999999999997 4555432 22 279999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCCC--CCCChhH
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHFD--NEIDMLD 161 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~~--~~id~~~ 161 (243)
+|+.+++. ++|...+.| |.-+.+|... .++....
T Consensus 270 ~G~~~~m~-~al~s~h~GwG~sv~iGv~~~~~~i~~~p 306 (375)
T KOG0022|consen 270 IGNVSTMR-AALESCHKGWGKSVVIGVAAAGQEISTRP 306 (375)
T ss_pred cCCHHHHH-HHHHHhhcCCCeEEEEEecCCCcccccch
Confidence 99999986 578888888 8888888764 3444443
|
|
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.8e-09 Score=93.66 Aligned_cols=140 Identities=17% Similarity=0.165 Sum_probs=93.9
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH-----Hh---hh--c
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR-----ED---VV--S 118 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~-----~~---~~--~ 118 (243)
++++.+. . ..+|++|+|.|+|++|+.+++.++.+|++ |++++.++.++..+...|++ +++. ++ .. .
T Consensus 150 ~~~~~~~-~-~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~ 227 (347)
T PRK10309 150 LHAFHLA-Q-GCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL 227 (347)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCC
Confidence 4554333 2 35799999999999999999999999996 78899999888777777764 3221 11 11 2
Q ss_pred CCc-EEEEccCChhcccHHHHccCCCCeEEEEecCCCCC--CChh---HHHHhhcCeEEEeecCeeee----EccCchhh
Q 037949 119 EAG-LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE--IDML---DLEAYRGIKRITIKPQTDPW----VFPQTRRG 188 (243)
Q Consensus 119 ~aD-vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~--id~~---~l~~~~~~~~~~i~~~~~~~----~~~~~~~a 188 (243)
+.| ++++|+|....++ +.++.++++|+++.+|..... ++.. .+.. ++..+......+ ...+.+++
T Consensus 228 ~~d~~v~d~~G~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~----~~~~i~g~~~~~~~~~~~~~~~~~ 302 (347)
T PRK10309 228 RFDQLILETAGVPQTVE-LAIEIAGPRAQLALVGTLHHDLHLTSATFGKILR----KELTVIGSWMNYSSPWPGQEWETA 302 (347)
T ss_pred CCCeEEEECCCCHHHHH-HHHHHhhcCCEEEEEccCCCCcccChhhhhHHhh----cCcEEEEEeccccCCcchhHHHHH
Confidence 467 9999999887776 579999999999999965422 3321 2222 223343211111 01233447
Q ss_pred HHhhhcCCe
Q 037949 189 IIILAERLL 197 (243)
Q Consensus 189 i~ll~~G~i 197 (243)
++++++|++
T Consensus 303 ~~~~~~g~i 311 (347)
T PRK10309 303 SRLLTERKL 311 (347)
T ss_pred HHHHHcCCC
Confidence 788898886
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=94.67 Aligned_cols=101 Identities=19% Similarity=0.184 Sum_probs=78.9
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCcccC------HHhh----h-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIPVLT------REDV----V- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~~~~------~~~~----~- 117 (243)
.++++.+. . ..+|++|+|.|.|+||+.+++.++.+|++ |+++|.++.|+..+.+.|++.+. ..+. .
T Consensus 174 a~~a~~~~-~-~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~~~ 251 (393)
T TIGR02819 174 GYHGAVTA-G-VGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQIEQILG 251 (393)
T ss_pred HHHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCcccHHHHHHHHcC
Confidence 35666543 2 45799999999999999999999999997 45568888888888888875321 1121 1
Q ss_pred -cCCcEEEEccCCh--------------hcccHHHHccCCCCeEEEEecCC
Q 037949 118 -SEAGLFVTTTENA--------------DIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 -~~aDvvi~a~G~~--------------~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|.+ ..++ +.++.++++|+++.+|.+
T Consensus 252 ~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~i~~~G~~ 301 (393)
T TIGR02819 252 EPEVDCAVDCVGFEARGHGHDGKKEAPATVLN-SLMEVTRVGGAIGIPGLY 301 (393)
T ss_pred CCCCcEEEECCCCccccccccccccchHHHHH-HHHHHhhCCCEEEEeeec
Confidence 2589999999986 3675 579999999999999986
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.2e-09 Score=95.26 Aligned_cols=92 Identities=22% Similarity=0.214 Sum_probs=73.4
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcc----c---CHHhhhcCCcEEEEcc---CC-
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPV----L---TREDVVSEAGLFVTTT---EN- 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~----~---~~~~~~~~aDvvi~a~---G~- 129 (243)
+++.+|+|+|+|.+|+.+++.++.+|++|+++|+++.+++.+.. .+..+ . ++.+.+.++|++|+|+ |.
T Consensus 165 l~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~ 244 (370)
T TIGR00518 165 VEPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAK 244 (370)
T ss_pred CCCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCC
Confidence 46688999999999999999999999999999999887655443 33321 1 2345677999999997 33
Q ss_pred -hhcccHHHHccCCCCeEEEEecCC
Q 037949 130 -ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 -~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+.+++.+.++.|++++++++++..
T Consensus 245 ~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 245 APKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCcCcCHHHHhcCCCCCEEEEEecC
Confidence 455788899999999999999865
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.4e-08 Score=92.74 Aligned_cols=101 Identities=13% Similarity=0.179 Sum_probs=78.7
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh----
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV---- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~---- 117 (243)
|+++.+... ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.+...|++ +++. .+.+
T Consensus 174 ~~a~~~~~~-~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~ 252 (368)
T TIGR02818 174 IGAVLNTAK-VEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEIT 252 (368)
T ss_pred HHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHh
Confidence 455533222 4579999999999999999999999999 799999999998888888874 3321 1111
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCC-eEEEEecCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNA-AIVCNIGHF 153 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g-~~vvnvg~~ 153 (243)
.++|++++|+|.+..+. +.++.++++ |+++.+|..
T Consensus 253 ~~g~d~vid~~G~~~~~~-~~~~~~~~~~G~~v~~g~~ 289 (368)
T TIGR02818 253 DGGVDYSFECIGNVNVMR-AALECCHKGWGESIIIGVA 289 (368)
T ss_pred CCCCCEEEECCCCHHHHH-HHHHHhhcCCCeEEEEecc
Confidence 26899999999877665 478888886 999999975
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.4e-09 Score=83.99 Aligned_cols=90 Identities=18% Similarity=0.207 Sum_probs=68.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch-hHHHHhhcCCcccCHHhhhcCCcEEEEccCC---hhcccHHH
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI-CALQALTEGIPVLTREDVVSEAGLFVTTTEN---ADIIMVRH 137 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~-r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~---~~~i~~~~ 137 (243)
+++|+|.|+|||..|.+.|+.||..|.+|++..+... ....|.++|+++.+..|+++.+|+|+..+.. +.+...+.
T Consensus 2 l~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~PD~~q~~vy~~~I 81 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLPDEVQPEVYEEEI 81 (165)
T ss_dssp HCTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-HHHHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCChHHHHHHHHHHH
Confidence 5799999999999999999999999999999888765 5678889999999999999999999988643 34444455
Q ss_pred HccCCCCeEEEEec
Q 037949 138 MKQMKNAAIVCNIG 151 (243)
Q Consensus 138 l~~l~~g~~vvnvg 151 (243)
...|++|..++..-
T Consensus 82 ~p~l~~G~~L~fah 95 (165)
T PF07991_consen 82 APNLKPGATLVFAH 95 (165)
T ss_dssp HHHS-TT-EEEESS
T ss_pred HhhCCCCCEEEeCC
Confidence 67899999888743
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.8e-08 Score=90.47 Aligned_cols=140 Identities=16% Similarity=0.060 Sum_probs=93.6
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCc-ccCH------HhhhcCCcE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIP-VLTR------EDVVSEAGL 122 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~-~~~~------~~~~~~aDv 122 (243)
++++.+. ....+|++|+|.|.|+||+.+++.++.+|++|++++.++.++..+. ..|++ +++. .+...++|+
T Consensus 169 ~~al~~~-~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D~ 247 (357)
T PLN02514 169 YSPLSHF-GLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDY 247 (357)
T ss_pred HHHHHHc-ccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCcE
Confidence 4455332 2235799999999999999999999999999988888776654443 46764 2221 112246899
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+++|+|....++ +.++.++++|+++.+|... .+++...+.. ++..+.... .....+..+++.++++|++
T Consensus 248 vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----~~~~i~g~~-~~~~~~~~~~~~~~~~g~l 318 (357)
T PLN02514 248 IIDTVPVFHPLE-PYLSLLKLDGKLILMGVINTPLQFVTPMLML----GRKVITGSF-IGSMKETEEMLEFCKEKGL 318 (357)
T ss_pred EEECCCchHHHH-HHHHHhccCCEEEEECCCCCCCcccHHHHhh----CCcEEEEEe-cCCHHHHHHHHHHHHhCCC
Confidence 999999776665 4799999999999999754 2344444433 223343211 1122233447899999975
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.1e-08 Score=89.54 Aligned_cols=92 Identities=20% Similarity=0.232 Sum_probs=75.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|.|+|+||+.+++.++.+|+ +|++++.++.++..+...|++ +++. .+.+ .++|++++|
T Consensus 184 ~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~ 263 (368)
T cd08300 184 VEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFEC 263 (368)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEEC
Confidence 3579999999999999999999999999 799999999998888888874 3321 1111 258999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCC
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHF 153 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~ 153 (243)
+|.+..++ +.++.++++ |+++.+|..
T Consensus 264 ~g~~~~~~-~a~~~l~~~~G~~v~~g~~ 290 (368)
T cd08300 264 IGNVKVMR-AALEACHKGWGTSVIIGVA 290 (368)
T ss_pred CCChHHHH-HHHHhhccCCCeEEEEccC
Confidence 99876665 478889886 999999875
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=98.82 E-value=4e-08 Score=90.24 Aligned_cols=132 Identities=19% Similarity=0.224 Sum_probs=91.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|.|+|+||+.+++.++.+|+ .|++++.++.+...+...|++ +++. .+.+ .++|++++|
T Consensus 191 ~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~ 270 (378)
T PLN02827 191 VSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFEC 270 (378)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEEC
Confidence 3579999999999999999999999999 588889899988888888874 3321 1111 158999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCCCC--CCChh-HHHHhhcCeEEEeecCeee-e-EccCchhhHHhhhcCCe
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHFDN--EIDML-DLEAYRGIKRITIKPQTDP-W-VFPQTRRGIIILAERLL 197 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~~~--~id~~-~l~~~~~~~~~~i~~~~~~-~-~~~~~~~ai~ll~~G~i 197 (243)
+|.+..+. ..++.++++ |+++.+|.... .++.. .+.. ++..+...... + ...+..++++++++|+|
T Consensus 271 ~G~~~~~~-~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~----~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i 342 (378)
T PLN02827 271 VGDTGIAT-TALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFL----SGRTLKGSLFGGWKPKSDLPSLVDKYMNKEI 342 (378)
T ss_pred CCChHHHH-HHHHhhccCCCEEEEECCcCCCccccccHHHHh----cCceEEeeecCCCchhhhHHHHHHHHHcCCC
Confidence 99877665 479999998 99999997642 23321 2222 22334321111 1 11133336789999988
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.9e-08 Score=82.41 Aligned_cols=85 Identities=24% Similarity=0.319 Sum_probs=66.3
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-CCcccCHHhhh-cCCcEEEEccCChhcccHH
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-GIPVLTREDVV-SEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G~~~~~~~~~~-~~aDvvi~a~G~~~~i~~~ 136 (243)
+..++|++++|+|+|.+|+.+|+.|...|++|+++|+++.++...... |...++.++.. ..+|+++.|+.. +.++.+
T Consensus 23 ~~~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l~~~~~Dv~vp~A~~-~~I~~~ 101 (200)
T cd01075 23 TDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEIYSVDADVFAPCALG-GVINDD 101 (200)
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhhccccCCEEEecccc-cccCHH
Confidence 336899999999999999999999999999999999998876554443 65555555554 379999988543 467777
Q ss_pred HHccCCCC
Q 037949 137 HMKQMKNA 144 (243)
Q Consensus 137 ~l~~l~~g 144 (243)
.++.++..
T Consensus 102 ~~~~l~~~ 109 (200)
T cd01075 102 TIPQLKAK 109 (200)
T ss_pred HHHHcCCC
Confidence 88888543
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.5e-08 Score=88.64 Aligned_cols=161 Identities=18% Similarity=0.148 Sum_probs=106.8
Q ss_pred hhccccc-hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcc-c-CH-----
Q 037949 43 LYGFRHS-LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPV-L-TR----- 113 (243)
Q Consensus 43 ~~~~~~~-~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~-~-~~----- 113 (243)
++-|+.. ++.++++. +. .+|+.+.|+|+|++|....+.++++|++|+++|.++.+.+.+.+ +|++. + ..
T Consensus 162 PlLCaGITvYspLk~~-g~-~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~ 239 (360)
T KOG0023|consen 162 PLLCAGITVYSPLKRS-GL-GPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDI 239 (360)
T ss_pred chhhcceEEeehhHHc-CC-CCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHH
Confidence 4445544 34555554 33 49999999999999999999999999999999999855556665 78863 2 22
Q ss_pred -HhhhcCCcEEEEccC--ChhcccHHHHccCCCCeEEEEecCCCCC--CChhHHHHhhcCeEEEeecCeeeeEccCchhh
Q 037949 114 -EDVVSEAGLFVTTTE--NADIIMVRHMKQMKNAAIVCNIGHFDNE--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRG 188 (243)
Q Consensus 114 -~~~~~~aDvvi~a~G--~~~~i~~~~l~~l~~g~~vvnvg~~~~~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~a 188 (243)
+++...-|.+++++. +.+.++ ..++.+|++|.+|.+|....+ ++...+.. ..+.+....-+ ...+-+++
T Consensus 240 ~~~~~~~~dg~~~~v~~~a~~~~~-~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil----~~~~I~GS~vG-~~ket~E~ 313 (360)
T KOG0023|consen 240 MKAIMKTTDGGIDTVSNLAEHALE-PLLGLLKVNGTLVLVGLPEKPLKLDTFPLIL----GRKSIKGSIVG-SRKETQEA 313 (360)
T ss_pred HHHHHHhhcCcceeeeeccccchH-HHHHHhhcCCEEEEEeCcCCcccccchhhhc----ccEEEEeeccc-cHHHHHHH
Confidence 222344566666655 566676 479999999999999998644 44444433 33444321111 12232337
Q ss_pred HHhhhcCCeecccCCCCCccccccchHHHH
Q 037949 189 IIILAERLLMNLGCPTGHPSFVMSCSFTNQ 218 (243)
Q Consensus 189 i~ll~~G~ivNl~s~~g~p~~~~~~~~~~~ 218 (243)
+++.++|.| . .|.++..++.-..
T Consensus 314 Ldf~a~~~i---k----~~IE~v~~~~v~~ 336 (360)
T KOG0023|consen 314 LDFVARGLI---K----SPIELVKLSEVNE 336 (360)
T ss_pred HHHHHcCCC---c----CceEEEehhHHHH
Confidence 888888876 2 5677777776333
|
|
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.3e-07 Score=85.38 Aligned_cols=140 Identities=18% Similarity=0.157 Sum_probs=96.1
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----RED----VV- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~- 117 (243)
.|+++... . ..+|++|+|.|.|.+|..+++.++..|+ +|++++.++.+...+...|++ +++ ..+ ..
T Consensus 161 a~~~l~~~-~-~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~~~~~ 238 (351)
T cd08233 161 AWHAVRRS-G-FKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKLTG 238 (351)
T ss_pred HHHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHHHHhC
Confidence 35665332 2 3579999999999999999999999999 899999888887777667764 222 111 12
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhc
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAE 194 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~ 194 (243)
.++|++++++|....+. +.++.++++|+++.+|.... .++...+.. +...+.... .+...+..++++++++
T Consensus 239 ~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~i~g~~-~~~~~~~~~~~~~~~~ 312 (351)
T cd08233 239 GGGVDVSFDCAGVQATLD-TAIDALRPRGTAVNVAIWEKPISFNPNDLVL----KEKTLTGSI-CYTREDFEEVIDLLAS 312 (351)
T ss_pred CCCCCEEEECCCCHHHHH-HHHHhccCCCEEEEEccCCCCCccCHHHHHh----hCcEEEEEe-ccCcchHHHHHHHHHc
Confidence 24999999998766665 57899999999999997642 344433333 223343211 1222333447788899
Q ss_pred CCe
Q 037949 195 RLL 197 (243)
Q Consensus 195 G~i 197 (243)
|++
T Consensus 313 g~l 315 (351)
T cd08233 313 GKI 315 (351)
T ss_pred CCC
Confidence 987
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.3e-07 Score=86.16 Aligned_cols=93 Identities=19% Similarity=0.296 Sum_probs=75.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|.|+|+||+.+++.++.+|+ +|++++.++++.+.+...|++ +++. .+.+ .++|++++|
T Consensus 185 ~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~ 264 (369)
T cd08301 185 VKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFEC 264 (369)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEEC
Confidence 3589999999999999999999999999 899999999998888888864 3221 1111 258999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCCC
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~~ 154 (243)
+|.+..+. ..+..++++ ++++.+|...
T Consensus 265 ~G~~~~~~-~~~~~~~~~~g~~v~~g~~~ 292 (369)
T cd08301 265 TGNIDAMI-SAFECVHDGWGVTVLLGVPH 292 (369)
T ss_pred CCChHHHH-HHHHHhhcCCCEEEEECcCC
Confidence 99877665 478888996 9999999764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.73 E-value=8e-08 Score=78.29 Aligned_cols=90 Identities=13% Similarity=0.147 Sum_probs=68.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH---H--HH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV---R--HM 138 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~---~--~l 138 (243)
++|.+||.|.+|..+|+.|...|.+|+++|+++++.......|+. +.++.++++.+|+|+.|..+...+.. . .+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~ 81 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL 81 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence 579999999999999999999999999999999988777777875 45688899999999999877543321 1 35
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..+++|.++++.+...
T Consensus 82 ~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 82 AGLRPGKIIIDMSTIS 97 (163)
T ss_dssp GGS-TTEEEEE-SS--
T ss_pred hccccceEEEecCCcc
Confidence 6678999999987654
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.1e-08 Score=85.38 Aligned_cols=81 Identities=21% Similarity=0.269 Sum_probs=68.4
Q ss_pred ccccccCcEEEEEcCChH-HHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHGDV-GRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~I-G~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.|++|+|+|.|.+ |+.++..|...|++|++++... .++.+.++.||+|+.++|.++.++.
T Consensus 152 ~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t-------------~~l~~~~~~ADIVV~avG~~~~i~~- 217 (285)
T PRK14189 152 IGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT-------------RDLAAHTRQADIVVAAVGKRNVLTA- 217 (285)
T ss_pred cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC-------------CCHHHHhhhCCEEEEcCCCcCccCH-
Confidence 455789999999999976 9999999999999999985432 2455667899999999999999975
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
+++|+|++|+++|+..
T Consensus 218 --~~ik~gavVIDVGin~ 233 (285)
T PRK14189 218 --DMVKPGATVIDVGMNR 233 (285)
T ss_pred --HHcCCCCEEEEccccc
Confidence 5679999999999753
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.5e-07 Score=83.38 Aligned_cols=80 Identities=21% Similarity=0.296 Sum_probs=68.5
Q ss_pred cccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHH
Q 037949 59 DITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~ 137 (243)
+..+.|++|+|+|.|. +|+.+|..|...||+|++++.... ++.+.++.||+||.|+|.++.++.+
T Consensus 153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~-------------~l~~~~~~ADIVIsAvg~p~~i~~~- 218 (286)
T PRK14175 153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK-------------DMASYLKDADVIVSAVGKPGLVTKD- 218 (286)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch-------------hHHHHHhhCCEEEECCCCCcccCHH-
Confidence 4568999999999997 999999999999999999976432 3456678999999999999999864
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
.+++|++|+++|...
T Consensus 219 --~vk~gavVIDvGi~~ 233 (286)
T PRK14175 219 --VVKEGAVIIDVGNTP 233 (286)
T ss_pred --HcCCCcEEEEcCCCc
Confidence 468999999999853
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.3e-07 Score=85.83 Aligned_cols=101 Identities=13% Similarity=0.133 Sum_probs=76.7
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCc-ccC------HHhhh---
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIP-VLT------REDVV--- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~-~~~------~~~~~--- 117 (243)
.|+++..... ..+|++|+|.|+ |+||+.+++.++.+|++|++++.++.+...+. ..|++ +++ ..+.+
T Consensus 146 A~~al~~~~~-~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~ 224 (348)
T PLN03154 146 AYAGFYEVCS-PKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRY 224 (348)
T ss_pred HHHHHHHhcC-CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHH
Confidence 3555543222 358999999999 89999999999999999999998888876665 57874 222 22222
Q ss_pred --cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 --SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 --~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|.. .+. ..++.++++|+++.+|..
T Consensus 225 ~~~gvD~v~d~vG~~-~~~-~~~~~l~~~G~iv~~G~~ 260 (348)
T PLN03154 225 FPEGIDIYFDNVGGD-MLD-AALLNMKIHGRIAVCGMV 260 (348)
T ss_pred CCCCcEEEEECCCHH-HHH-HHHHHhccCCEEEEECcc
Confidence 2589999999874 454 579999999999999865
|
|
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.4e-07 Score=83.61 Aligned_cols=101 Identities=17% Similarity=0.197 Sum_probs=78.1
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----RED----VV-- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~-- 117 (243)
++++.+. . ..+|++|+|.|+|+||+.+++.++.+|+ .|++++.++.+...+...|++ +++ ..+ ..
T Consensus 156 ~~~~~~~-~-~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~ 233 (351)
T cd08285 156 FHGAELA-N-IKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGG 233 (351)
T ss_pred HHHHHcc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCC
Confidence 4554333 2 4579999999999999999999999999 588899998888777777864 222 111 12
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|++++|+|....+. +.++.++++|+++.+|...
T Consensus 234 ~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 269 (351)
T cd08285 234 KGVDAVIIAGGGQDTFE-QALKVLKPGGTISNVNYYG 269 (351)
T ss_pred CCCcEEEECCCCHHHHH-HHHHHhhcCCEEEEecccC
Confidence 35899999999876665 5789999999999998764
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.4e-07 Score=82.18 Aligned_cols=81 Identities=25% Similarity=0.323 Sum_probs=67.3
Q ss_pred ccccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.|++|+|+|.|. +|+.++..|...|++|+++++... ++.+.++++|++|.|+|.+..+..
T Consensus 153 ~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~-------------~L~~~~~~aDIvI~AtG~~~~v~~- 218 (283)
T PRK14192 153 YNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ-------------NLPELVKQADIIVGAVGKPELIKK- 218 (283)
T ss_pred cCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch-------------hHHHHhccCCEEEEccCCCCcCCH-
Confidence 34568999999999997 999999999999999999976322 234456799999999998887764
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
+.++++++|+++|...
T Consensus 219 --~~lk~gavViDvg~n~ 234 (283)
T PRK14192 219 --DWIKQGAVVVDAGFHP 234 (283)
T ss_pred --HHcCCCCEEEEEEEee
Confidence 3479999999999864
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.1e-07 Score=76.55 Aligned_cols=78 Identities=22% Similarity=0.271 Sum_probs=65.9
Q ss_pred cccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHc
Q 037949 61 TIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 61 ~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~ 139 (243)
.+.|++|+|+|+|. +|..+++.|...|++|++++++.. ++.+.+.++|+||.|++.+++++.+.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~-------------~l~~~l~~aDiVIsat~~~~ii~~~~-- 105 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK-------------NLKEHTKQADIVIVAVGKPGLVKGDM-- 105 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch-------------hHHHHHhhCCEEEEcCCCCceecHHH--
Confidence 57999999999997 599999999999999999987643 23456789999999999988887653
Q ss_pred cCCCCeEEEEecCCC
Q 037949 140 QMKNAAIVCNIGHFD 154 (243)
Q Consensus 140 ~l~~g~~vvnvg~~~ 154 (243)
++++.+++++|...
T Consensus 106 -~~~~~viIDla~pr 119 (168)
T cd01080 106 -VKPGAVVIDVGINR 119 (168)
T ss_pred -ccCCeEEEEccCCC
Confidence 57789999999864
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.2e-07 Score=74.77 Aligned_cols=80 Identities=24% Similarity=0.297 Sum_probs=58.5
Q ss_pred cccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHH
Q 037949 59 DITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 59 ~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~ 137 (243)
+..+.||+|+|+|.+ .+|+.++..|...|+.|++++.... ++.+.++.||+||.++|.++.+..
T Consensus 31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~-------------~l~~~~~~ADIVVsa~G~~~~i~~-- 95 (160)
T PF02882_consen 31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK-------------NLQEITRRADIVVSAVGKPNLIKA-- 95 (160)
T ss_dssp T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS-------------SHHHHHTTSSEEEE-SSSTT-B-G--
T ss_pred CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC-------------cccceeeeccEEeeeecccccccc--
Confidence 446899999999999 6999999999999999999976543 344567899999999999999874
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
+++|+|++|+++|...
T Consensus 96 -~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 96 -DWIKPGAVVIDVGINY 111 (160)
T ss_dssp -GGS-TTEEEEE--CEE
T ss_pred -ccccCCcEEEecCCcc
Confidence 4679999999999853
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.3e-07 Score=85.70 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=74.9
Q ss_pred hhhhhhhccc--cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHH-HHhhcCCcccC---HHhhhcCCcEE
Q 037949 51 PDGLMRATDI--TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICAL-QALTEGIPVLT---REDVVSEAGLF 123 (243)
Q Consensus 51 ~~av~~~~~~--~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~-~a~~~G~~~~~---~~~~~~~aDvv 123 (243)
.+++..+... .+.|++|+|+|+|+||+.+++.++..|+ +|+++++++.+.. .+...|..+.+ ..+.+.++|+|
T Consensus 167 ~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvV 246 (423)
T PRK00045 167 SAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADIV 246 (423)
T ss_pred HHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCEE
Confidence 3566544321 3689999999999999999999999998 8999999988754 34445544433 34456789999
Q ss_pred EEccCChh-cccHHHHccC-----CCCeEEEEecCC
Q 037949 124 VTTTENAD-IIMVRHMKQM-----KNAAIVCNIGHF 153 (243)
Q Consensus 124 i~a~G~~~-~i~~~~l~~l-----~~g~~vvnvg~~ 153 (243)
|+|||+++ .++.+.+..+ +...++++.+..
T Consensus 247 I~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~P 282 (423)
T PRK00045 247 ISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAVP 282 (423)
T ss_pred EECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCCC
Confidence 99998765 4655556443 245678888865
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.6e-07 Score=82.38 Aligned_cols=81 Identities=23% Similarity=0.234 Sum_probs=69.0
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+|+|+|.| .+|+.+|..|...|++|++++.... ++.+..+.||+|+.|+|.++.+..
T Consensus 152 ~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------~l~e~~~~ADIVIsavg~~~~v~~ 218 (301)
T PRK14194 152 DTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------DAKALCRQADIVVAAVGRPRLIDA 218 (301)
T ss_pred HhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-------------CHHHHHhcCCEEEEecCChhcccH
Confidence 34557899999999997 9999999999999999999976542 456667899999999999999875
Q ss_pred HHHccCCCCeEEEEecCC
Q 037949 136 RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~ 153 (243)
. + +++|++|+++|+.
T Consensus 219 ~-~--ik~GaiVIDvgin 233 (301)
T PRK14194 219 D-W--LKPGAVVIDVGIN 233 (301)
T ss_pred h-h--ccCCcEEEEeccc
Confidence 3 3 7999999999975
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.8e-07 Score=74.05 Aligned_cols=93 Identities=25% Similarity=0.303 Sum_probs=68.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-hcC---CcccCH---HhhhcCCcEEEEccCCh-h
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-TEG---IPVLTR---EDVVSEAGLFVTTTENA-D 131 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~~G---~~~~~~---~~~~~~aDvvi~a~G~~-~ 131 (243)
.+++++++|+|+|++|+.++..|...|+ +|++++++.+++.... ..+ +...+. .+.+..+|+||.||+.+ .
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSGMP 88 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTTST
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCCCc
Confidence 4789999999999999999999999999 5999999988764433 222 223333 34567899999998765 3
Q ss_pred cccHHHHccCCCC-eEEEEecCC
Q 037949 132 IIMVRHMKQMKNA-AIVCNIGHF 153 (243)
Q Consensus 132 ~i~~~~l~~l~~g-~~vvnvg~~ 153 (243)
.++.+.+....+. .+++..+..
T Consensus 89 ~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 89 IITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp SSTHHHHTTTCHHCSEEEES-SS
T ss_pred ccCHHHHHHHHhhhhceeccccC
Confidence 5666667655433 488898865
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.6e-07 Score=85.71 Aligned_cols=131 Identities=11% Similarity=0.032 Sum_probs=87.0
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCC---EEEEEeCCchhHHHHhhc--------CCc--ccC------HHhh----
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGA---RVMGTEIDLICALQALTE--------GIP--VLT------REDV---- 116 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga---~V~v~d~~~~r~~~a~~~--------G~~--~~~------~~~~---- 116 (243)
..+|++|+|+| .|+||+.+++.++.+|+ +|+++|.++.|++.+... |++ +++ ..+.
T Consensus 173 ~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~ 252 (410)
T cd08238 173 IKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMEL 252 (410)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHH
Confidence 35789999998 59999999999999764 799999999998887775 543 222 1111
Q ss_pred h--cCCcEEEEccCChhcccHHHHccCCCCeEEEEe-cCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhH
Q 037949 117 V--SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNI-GHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGI 189 (243)
Q Consensus 117 ~--~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnv-g~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai 189 (243)
. .++|++++++|.+..+. +.++.++++|.++.+ |..+ .+++...+.. ++..+.. +......+.++++
T Consensus 253 t~g~g~D~vid~~g~~~~~~-~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~ 326 (410)
T cd08238 253 TGGQGFDDVFVFVPVPELVE-EADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHY----NNTHYVG-TSGGNTDDMKEAI 326 (410)
T ss_pred hCCCCCCEEEEcCCCHHHHH-HHHHHhccCCeEEEEEccCCCCccccccHHHhhh----cCcEEEE-eCCCCHHHHHHHH
Confidence 1 25899999999877776 478999877766654 4321 2344433333 3333432 1111222334478
Q ss_pred HhhhcCCe
Q 037949 190 IILAERLL 197 (243)
Q Consensus 190 ~ll~~G~i 197 (243)
+++++|++
T Consensus 327 ~li~~g~i 334 (410)
T cd08238 327 DLMAAGKL 334 (410)
T ss_pred HHHHcCCC
Confidence 99999986
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.1e-07 Score=83.69 Aligned_cols=93 Identities=22% Similarity=0.273 Sum_probs=74.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|+|.|++|+.+++.++.+|+ +|++++.++.+++.+...|++ +++. .+.+ .+.|++++|
T Consensus 182 ~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~ 261 (365)
T cd08277 182 VEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFEC 261 (365)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEEC
Confidence 4689999999999999999999999999 799999999988888777864 2221 1111 268999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCCC
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~~ 154 (243)
+|....+. +.++.++++ |+++.+|...
T Consensus 262 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 289 (365)
T cd08277 262 TGNADLMN-EALESTKLGWGVSVVVGVPP 289 (365)
T ss_pred CCChHHHH-HHHHhcccCCCEEEEEcCCC
Confidence 99877665 478889875 9999999753
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.2e-07 Score=82.18 Aligned_cols=88 Identities=20% Similarity=0.192 Sum_probs=68.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcCCcccCHHhhhcCCcEEEEccCCh---hcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEGIPVLTREDVVSEAGLFVTTTENA---DIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~---~~i~~~ 136 (243)
.++|++|.|||+|.+|.++|+.|+..|.+|++.++++.+ ...+...|+.+.+..++++.+|+|+.++... .+++.+
T Consensus 14 ~L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~~ 93 (330)
T PRK05479 14 LIKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEEE 93 (330)
T ss_pred hhCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHHH
Confidence 478999999999999999999999999999988776443 3345566877668888899999999997542 334334
Q ss_pred HHccCCCCeEEE
Q 037949 137 HMKQMKNAAIVC 148 (243)
Q Consensus 137 ~l~~l~~g~~vv 148 (243)
.+..++++.+++
T Consensus 94 I~~~Lk~g~iL~ 105 (330)
T PRK05479 94 IEPNLKEGAALA 105 (330)
T ss_pred HHhcCCCCCEEE
Confidence 566788888774
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.6e-07 Score=80.21 Aligned_cols=81 Identities=26% Similarity=0.234 Sum_probs=68.1
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+|+|+|.| .+|+.+|..|...||.|++++.... ++.+.++.||+|+.|+|.++.++.
T Consensus 150 ~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~-------------~l~~~~~~ADIvV~AvG~p~~i~~ 216 (285)
T PRK14191 150 HYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK-------------DLSFYTQNADIVCVGVGKPDLIKA 216 (285)
T ss_pred HhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH-------------HHHHHHHhCCEEEEecCCCCcCCH
Confidence 34556899999999999 8999999999999999999855332 234567899999999999999986
Q ss_pred HHHccCCCCeEEEEecCC
Q 037949 136 RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~ 153 (243)
+ ++++|++|+++|+.
T Consensus 217 ~---~vk~GavVIDvGi~ 231 (285)
T PRK14191 217 S---MVKKGAVVVDIGIN 231 (285)
T ss_pred H---HcCCCcEEEEeecc
Confidence 5 45999999999975
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.7e-07 Score=80.18 Aligned_cols=80 Identities=26% Similarity=0.307 Sum_probs=68.1
Q ss_pred ccccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.|++|+|+|.+. +|+.++..|...||.|++++... .++.+.++.||++|.|+|.++.++.+
T Consensus 158 ~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIvv~AvG~p~~i~~~ 224 (287)
T PRK14176 158 YGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT-------------DDLKKYTLDADILVVATGVKHLIKAD 224 (287)
T ss_pred cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC-------------CCHHHHHhhCCEEEEccCCccccCHH
Confidence 34568999999999996 99999999999999999997432 23556678999999999999999754
Q ss_pred HHccCCCCeEEEEecCC
Q 037949 137 HMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~ 153 (243)
++++|++|+++|+.
T Consensus 225 ---~vk~gavVIDvGin 238 (287)
T PRK14176 225 ---MVKEGAVIFDVGIT 238 (287)
T ss_pred ---HcCCCcEEEEeccc
Confidence 67999999999984
|
|
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=98.54 E-value=6.3e-07 Score=80.40 Aligned_cols=101 Identities=17% Similarity=0.142 Sum_probs=78.3
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh---hcCCc
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV---VSEAG 121 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~---~~~aD 121 (243)
++++... . ..+|++|+|.|.|++|+.+++.++.+|++|++++.++.++..+...|++ +++ ..+. ..+.|
T Consensus 153 ~~~~~~~-~-~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d 230 (333)
T cd08296 153 FNALRNS-G-AKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAK 230 (333)
T ss_pred HHHHHhc-C-CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCC
Confidence 4555433 2 4579999999999999999999999999999999998888777777764 222 1111 24689
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++++++|....+. ..++.++++|+++.+|...
T Consensus 231 ~vi~~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 262 (333)
T cd08296 231 LILATAPNAKAIS-ALVGGLAPRGKLLILGAAG 262 (333)
T ss_pred EEEECCCchHHHH-HHHHHcccCCEEEEEecCC
Confidence 9999987666665 4789999999999998764
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=98.53 E-value=8.8e-07 Score=70.69 Aligned_cols=81 Identities=21% Similarity=0.256 Sum_probs=68.3
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+|+|+|-+ .+|+.++..|...|++|++++.+.. ++++.++.||+|+.++|.++.++.
T Consensus 22 ~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~-------------~l~~~v~~ADIVvsAtg~~~~i~~- 87 (140)
T cd05212 22 EGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI-------------QLQSKVHDADVVVVGSPKPEKVPT- 87 (140)
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc-------------CHHHHHhhCCEEEEecCCCCccCH-
Confidence 3456899999999999 7999999999999999999976432 345567899999999999988875
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
+++|+|++++++|...
T Consensus 88 --~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 88 --EWIKPGATVINCSPTK 103 (140)
T ss_pred --HHcCCCCEEEEcCCCc
Confidence 3579999999988764
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.4e-07 Score=84.16 Aligned_cols=93 Identities=19% Similarity=0.245 Sum_probs=69.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHH-HHhhcCCcccC---HHhhhcCCcEEEEccCChh-ccc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICAL-QALTEGIPVLT---REDVVSEAGLFVTTTENAD-IIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~-~a~~~G~~~~~---~~~~~~~aDvvi~a~G~~~-~i~ 134 (243)
.++|++|+|+|+|+||+.+++.|+..| .+|+++++++.+.. .+...|....+ ..+.+.++|+||+|||.++ +++
T Consensus 177 ~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aDvVi~aT~s~~~ii~ 256 (417)
T TIGR01035 177 SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEADIVISSTGAPHPIVS 256 (417)
T ss_pred CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCCEEEECCCCCCceEc
Confidence 368999999999999999999999999 58999999988753 34444543333 3456779999999998764 566
Q ss_pred HHHHccCC----CCeEEEEecCC
Q 037949 135 VRHMKQMK----NAAIVCNIGHF 153 (243)
Q Consensus 135 ~~~l~~l~----~g~~vvnvg~~ 153 (243)
.+.+..+. ...++++.+..
T Consensus 257 ~e~l~~~~~~~~~~~~viDla~P 279 (417)
T TIGR01035 257 KEDVERALRERTRPLFIIDIAVP 279 (417)
T ss_pred HHHHHHHHhcCCCCeEEEEeCCC
Confidence 66665542 23478888864
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1e-07 Score=82.02 Aligned_cols=138 Identities=18% Similarity=0.190 Sum_probs=82.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCC-cccCHHhhhcCCcEEEEccCChhcccH--H
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALT-EGI-PVLTREDVVSEAGLFVTTTENADIIMV--R 136 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~-~~~~~~~~~~~aDvvi~a~G~~~~i~~--~ 136 (243)
+.+|.++|+|+. +||.++|+.|...|++|+.+.+..+|++..+. .+. .+. ....||- +-.....++.. +
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~-----~~~~DVt-D~~~~~~~i~~~~~ 77 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAAL-----ALALDVT-DRAAVEAAIEALPE 77 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceE-----EEeeccC-CHHHHHHHHHHHHH
Confidence 568999999998 99999999999999999999999998754332 231 000 0011111 00011112221 2
Q ss_pred HHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCCCCccc
Q 037949 137 HMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPTGHPSF 209 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~g~p~~ 209 (243)
.+. +-+.+|+|+|... .+.+.++|..- +..|+.+..+.... +++.| ..|.|||++|+.|+-.+
T Consensus 78 ~~g--~iDiLvNNAGl~~g~~~~~~~~~dw~~M-------id~Ni~G~l~~~~a-vLP~m~~r~~G~IiN~~SiAG~~~y 147 (246)
T COG4221 78 EFG--RIDILVNNAGLALGDPLDEADLDDWDRM-------IDTNVKGLLNGTRA-VLPGMVERKSGHIINLGSIAGRYPY 147 (246)
T ss_pred hhC--cccEEEecCCCCcCChhhhCCHHHHHHH-------HHHHHHHHHHHHHH-hhhHHHhcCCceEEEeccccccccC
Confidence 344 4589999999764 23455555431 33444433332223 55544 34899999998876555
Q ss_pred cccchH
Q 037949 210 VMSCSF 215 (243)
Q Consensus 210 ~~~~~~ 215 (243)
--...|
T Consensus 148 ~~~~vY 153 (246)
T COG4221 148 PGGAVY 153 (246)
T ss_pred CCCccc
Confidence 444443
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.5e-07 Score=79.71 Aligned_cols=80 Identities=26% Similarity=0.226 Sum_probs=68.3
Q ss_pred ccccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.||+|+|+|.|. +|+.++..|...||.|++++... .++.+.++.||++|.++|.++.+..
T Consensus 153 ~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIvi~avG~p~~v~~- 218 (285)
T PRK10792 153 YGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT-------------KNLRHHVRNADLLVVAVGKPGFIPG- 218 (285)
T ss_pred cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC-------------CCHHHHHhhCCEEEEcCCCcccccH-
Confidence 35568999999999996 99999999999999999996542 2455667899999999999999875
Q ss_pred HHccCCCCeEEEEecCC
Q 037949 137 HMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~ 153 (243)
+.+++|++|+++|+.
T Consensus 219 --~~vk~gavVIDvGin 233 (285)
T PRK10792 219 --EWIKPGAIVIDVGIN 233 (285)
T ss_pred --HHcCCCcEEEEcccc
Confidence 457999999999975
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.52 E-value=9.6e-07 Score=79.35 Aligned_cols=104 Identities=20% Similarity=0.236 Sum_probs=73.3
Q ss_pred hhhhhhhccc--cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhH-HHHhhcCCcccC---HHhhhcCCcEE
Q 037949 51 PDGLMRATDI--TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICA-LQALTEGIPVLT---REDVVSEAGLF 123 (243)
Q Consensus 51 ~~av~~~~~~--~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~-~~a~~~G~~~~~---~~~~~~~aDvv 123 (243)
.+++..+... .+.+++|+|+|+|+||+.+++.++..|+ +|+++++++.+. ..+...|..+.+ ..+.+.++|+|
T Consensus 163 ~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvV 242 (311)
T cd05213 163 SAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADVV 242 (311)
T ss_pred HHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCEE
Confidence 3566544321 2579999999999999999999999886 799999998865 345556665444 34556789999
Q ss_pred EEccCChhc--ccHHHHccC-CCCeEEEEecCCC
Q 037949 124 VTTTENADI--IMVRHMKQM-KNAAIVCNIGHFD 154 (243)
Q Consensus 124 i~a~G~~~~--i~~~~l~~l-~~g~~vvnvg~~~ 154 (243)
|.|++.++. +....++.. +++.++++.+.+.
T Consensus 243 i~at~~~~~~~~~~~~~~~~~~~~~~viDlavPr 276 (311)
T cd05213 243 ISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPR 276 (311)
T ss_pred EECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 999998765 112233333 2466888888653
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.9e-07 Score=75.16 Aligned_cols=90 Identities=23% Similarity=0.248 Sum_probs=69.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh--hcCCc-c--cC----HHhhhcCCcEEEEccCCh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL--TEGIP-V--LT----REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~--~~G~~-~--~~----~~~~~~~aDvvi~a~G~~ 130 (243)
.+.||+|+|+|-+ -+|+.++..|...||.|+++|.+.... +.. ..... + .+ +.+.++.||+||.++|.+
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~-~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~ 137 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV-FTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSP 137 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc-cccccccccccccccchhhHHHHHhhhCCEEEEccCCC
Confidence 5899999999999 799999999999999999998765422 110 01111 1 12 456678999999999999
Q ss_pred hc-ccHHHHccCCCCeEEEEecCCC
Q 037949 131 DI-IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 131 ~~-i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+. +..+ ++|+|++|+++|...
T Consensus 138 ~~~i~~d---~ik~GavVIDVGi~~ 159 (197)
T cd01079 138 NYKVPTE---LLKDGAICINFASIK 159 (197)
T ss_pred CCccCHH---HcCCCcEEEEcCCCc
Confidence 98 8754 468999999999874
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=98.50 E-value=7e-07 Score=79.74 Aligned_cols=101 Identities=16% Similarity=0.128 Sum_probs=77.0
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC------HHhhh----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT------REDVV---- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~------~~~~~---- 117 (243)
.|+++.+... ..+|++|+|.|+ |++|..+++.++.+|++|++++.++.+.+.+...|++ +++ ..+.+
T Consensus 126 A~~~l~~~~~-~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~ 204 (325)
T TIGR02825 126 AYFGLLEICG-VKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKAS 204 (325)
T ss_pred HHHHHHHHhC-CCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhC
Confidence 3455433222 358999999995 8999999999999999999999888888778778874 222 11211
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+.|++++++|... +. ..++.++++|+++.+|..
T Consensus 205 ~~gvdvv~d~~G~~~-~~-~~~~~l~~~G~iv~~G~~ 239 (325)
T TIGR02825 205 PDGYDCYFDNVGGEF-SN-TVIGQMKKFGRIAICGAI 239 (325)
T ss_pred CCCeEEEEECCCHHH-HH-HHHHHhCcCcEEEEecch
Confidence 25899999998754 43 579999999999999864
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=98.48 E-value=1e-06 Score=72.23 Aligned_cols=91 Identities=21% Similarity=0.269 Sum_probs=66.5
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc---cc-------------------C-----HH
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP---VL-------------------T-----RE 114 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~---~~-------------------~-----~~ 114 (243)
++..+|+|+|+|.+|+.++..|+.+|++|++.|.++.+.......+.. +. . +.
T Consensus 18 ~~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 18 VPPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp E-T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 566899999999999999999999999999999998876555444432 21 1 23
Q ss_pred hhhcCCcEEEEcc-----CChhcccHHHHccCCCCeEEEEecC
Q 037949 115 DVVSEAGLFVTTT-----ENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 115 ~~~~~aDvvi~a~-----G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
+.+..+|+++.+. ..|.+++.+.++.|+++.+++.++.
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 3456899998652 3567899999999999999998764
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.2e-06 Score=77.51 Aligned_cols=102 Identities=17% Similarity=0.164 Sum_probs=75.7
Q ss_pred hhhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|+++.+... ..+|++|+|.| +|.+|..+.+.++++|++++++..++++.+.+.+.|++ +++ +.+.+
T Consensus 130 A~~~l~~~~~-l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~ 208 (326)
T COG0604 130 AWLALFDRAG-LKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTG 208 (326)
T ss_pred HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcC
Confidence 3555554222 35699999999 67999999999999998776666666666677788885 443 33332
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++.|+|+++.|.... . +.+..++++|+++.+|...
T Consensus 209 g~gvDvv~D~vG~~~~-~-~~l~~l~~~G~lv~ig~~~ 244 (326)
T COG0604 209 GKGVDVVLDTVGGDTF-A-ASLAALAPGGRLVSIGALS 244 (326)
T ss_pred CCCceEEEECCCHHHH-H-HHHHHhccCCEEEEEecCC
Confidence 269999999988653 3 3688899999999988753
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.1e-06 Score=70.14 Aligned_cols=104 Identities=24% Similarity=0.209 Sum_probs=71.6
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHh-hcCC-----cccCHHhhhcCCcE
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQAL-TEGI-----PVLTREDVVSEAGL 122 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~-~~G~-----~~~~~~~~~~~aDv 122 (243)
+..++++. +....+++++|+|+|.+|..+++.++..| .+|+++|+++.+..... ..+. ...+..+.+.++|+
T Consensus 6 ~~~a~~~~-~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 84 (155)
T cd01065 6 FVRALEEA-GIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLAEADL 84 (155)
T ss_pred HHHHHHhh-CCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccccCCE
Confidence 34455543 33467899999999999999999999996 68999999987754433 2232 23345556789999
Q ss_pred EEEccCChhc-ccHH--HHccCCCCeEEEEecCCC
Q 037949 123 FVTTTENADI-IMVR--HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 123 vi~a~G~~~~-i~~~--~l~~l~~g~~vvnvg~~~ 154 (243)
|+.|++.... .... ....++++..+++++..+
T Consensus 85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~ 119 (155)
T cd01065 85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNP 119 (155)
T ss_pred EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCC
Confidence 9999865432 1100 112357888999887764
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=98.47 E-value=9e-07 Score=78.48 Aligned_cols=89 Identities=17% Similarity=0.147 Sum_probs=70.0
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH------HHH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV------RHM 138 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~------~~l 138 (243)
+|.|||+|.+|..+|..+...|.+|+++|+++.+...+...|.. ..+..++++++|+|+.|......+.. ..+
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~~ 80 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGII 80 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchHh
Confidence 48999999999999999999999999999999887666666764 34567788899999999765432221 134
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..++++.+++|.+...
T Consensus 81 ~~~~~g~iivd~st~~ 96 (291)
T TIGR01505 81 EGAKPGKTLVDMSSIS 96 (291)
T ss_pred hcCCCCCEEEECCCCC
Confidence 5678899999987654
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.47 E-value=3e-06 Score=75.16 Aligned_cols=128 Identities=16% Similarity=0.132 Sum_probs=88.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhh--hcCCcEEEEccCChhcccHHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDV--VSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~--~~~aDvvi~a~G~~~~i~~~~ 137 (243)
..+|++++|.|.|.+|+.+++.++.+|++|++++.++.+...+...|+.. .+..+. -...|++++|+|....+. ..
T Consensus 153 ~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vid~~g~~~~~~-~~ 231 (319)
T cd08242 153 ITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAESEGGGFDVVVEATGSPSGLE-LA 231 (319)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCccccccCCCCCEEEECCCChHHHH-HH
Confidence 45799999999999999999999999999999998888887777778752 222221 136899999998765554 46
Q ss_pred HccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 138 MKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
++.++++|.++..+... ..++...+.. ++..+.. .. ....++++.++++|++
T Consensus 232 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~~----~~~~i~~-~~---~~~~~~~~~~~~~~~l 285 (319)
T cd08242 232 LRLVRPRGTVVLKSTYAGPASFDLTKAVV----NEITLVG-SR---CGPFAPALRLLRKGLV 285 (319)
T ss_pred HHHhhcCCEEEEEcccCCCCccCHHHhee----cceEEEE-Ee---cccHHHHHHHHHcCCC
Confidence 88889999999877543 2344333222 2232321 11 1112337788888876
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.8e-06 Score=77.63 Aligned_cols=139 Identities=17% Similarity=0.116 Sum_probs=92.8
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH------hhhcCCcEE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE------DVVSEAGLF 123 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~------~~~~~aDvv 123 (243)
++++.+. . ..+|.+++|.|.|++|+.+++.++.+|++|++++.++.+...+...|++ +++.. ..-.++|++
T Consensus 159 ~~~~~~~-~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~d~v 236 (337)
T cd05283 159 YSPLKRN-G-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLI 236 (337)
T ss_pred HHHHHhc-C-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCCceEE
Confidence 4444433 2 3578999999999999999999999999999999988877777667764 32211 112468999
Q ss_pred EEccCChhcccHHHHccCCCCeEEEEecCCCCC--CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 124 i~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
++|+|....+. +.++.++++++++.+|..+.. ++...+.. +...+.... .+...+.++.+.++.+|++
T Consensus 237 ~~~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~i~~~~-~~~~~~~~~~~~~~~~~~l 306 (337)
T cd05283 237 IDTVSASHDLD-PYLSLLKPGGTLVLVGAPEEPLPVPPFPLIF----GRKSVAGSL-IGGRKETQEMLDFAAEHGI 306 (337)
T ss_pred EECCCCcchHH-HHHHHhcCCCEEEEEeccCCCCccCHHHHhc----CceEEEEec-ccCHHHHHHHHHHHHhCCC
Confidence 99998765454 578999999999999876422 34333222 223333211 1122333436677788875
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=9.6e-07 Score=77.92 Aligned_cols=81 Identities=26% Similarity=0.282 Sum_probs=68.7
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+|+|+|-+ .+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.+
T Consensus 152 ~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T-------------~~l~~~~~~ADIvIsAvGkp~~i~~~ 218 (278)
T PRK14172 152 LNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKT-------------KNLKEVCKKADILVVAIGRPKFIDEE 218 (278)
T ss_pred hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCccCHH
Confidence 4556899999999999 799999999999999999996432 24556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 219 ---~ik~gavVIDvGin~ 233 (278)
T PRK14172 219 ---YVKEGAIVIDVGTSS 233 (278)
T ss_pred ---HcCCCcEEEEeeccc
Confidence 468999999999763
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1e-06 Score=78.07 Aligned_cols=82 Identities=21% Similarity=0.284 Sum_probs=69.0
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..++.+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||++|.++|.++.++.
T Consensus 151 ~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t-------------~~l~~~~~~ADIvI~AvG~p~~i~~ 217 (284)
T PRK14190 151 EYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT-------------KNLAELTKQADILIVAVGKPKLITA 217 (284)
T ss_pred HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc-------------hhHHHHHHhCCEEEEecCCCCcCCH
Confidence 34556899999999999 799999999999999999996432 2355667899999999999999986
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+. +++|++|+++|+..
T Consensus 218 ~~---ik~gavVIDvGi~~ 233 (284)
T PRK14190 218 DM---VKEGAVVIDVGVNR 233 (284)
T ss_pred HH---cCCCCEEEEeeccc
Confidence 54 58999999999863
|
|
| >PRK05225 ketol-acid reductoisomerase; Validated | Back alignment and domain information |
|---|
Probab=98.47 E-value=3e-07 Score=85.71 Aligned_cols=90 Identities=20% Similarity=0.188 Sum_probs=73.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEE------EeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCC--hhc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMG------TEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTEN--ADI 132 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v------~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~--~~~ 132 (243)
.++||+|+|+|+|.||.+.|..++..|.+|++ +|.+......|...|+.+.+..++++.||+|+.++.. .+.
T Consensus 33 ~LkgKtIaIIGyGSqG~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPDt~q~~ 112 (487)
T PRK05225 33 YLKGKKIVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSD 112 (487)
T ss_pred HhCCCEEEEEccCHHHHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCChHHHHH
Confidence 47999999999999999999999999999984 4444444556777899888889999999999988643 334
Q ss_pred ccHHHHccCCCCeEEEEe
Q 037949 133 IMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnv 150 (243)
+..+.+..||+|+.+...
T Consensus 113 v~~~i~p~LK~Ga~L~fs 130 (487)
T PRK05225 113 VVRAVQPLMKQGAALGYS 130 (487)
T ss_pred HHHHHHhhCCCCCEEEec
Confidence 556789999999998864
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=9.7e-07 Score=78.09 Aligned_cols=82 Identities=29% Similarity=0.267 Sum_probs=68.9
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.++|.++.++.
T Consensus 150 ~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T-------------~~l~~~~~~ADIvI~AvG~~~~i~~ 216 (284)
T PRK14170 150 STGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRT-------------KDLPQVAKEADILVVATGLAKFVKK 216 (284)
T ss_pred HhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEecCCcCccCH
Confidence 34557899999999999 799999999999999999985432 2455667899999999999999986
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ++|+|++|+++|+..
T Consensus 217 ~---~vk~GavVIDvGin~ 232 (284)
T PRK14170 217 D---YIKPGAIVIDVGMDR 232 (284)
T ss_pred H---HcCCCCEEEEccCcc
Confidence 4 468999999999863
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.1e-06 Score=77.80 Aligned_cols=81 Identities=21% Similarity=0.260 Sum_probs=68.6
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+|+|+|-+ .+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.
T Consensus 152 ~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T-------------~~l~~~~~~ADIvIsAvGk~~~i~~ 218 (284)
T PRK14177 152 EYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKT-------------QNLPSIVRQADIIVGAVGKPEFIKA 218 (284)
T ss_pred HhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEeCCCcCccCH
Confidence 34557899999999999 799999999999999999996432 2355667899999999999999986
Q ss_pred HHHccCCCCeEEEEecCC
Q 037949 136 RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~ 153 (243)
+ ++|+|++|+++|+.
T Consensus 219 ~---~ik~gavVIDvGin 233 (284)
T PRK14177 219 D---WISEGAVLLDAGYN 233 (284)
T ss_pred H---HcCCCCEEEEecCc
Confidence 4 46899999999985
|
|
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.1e-06 Score=77.82 Aligned_cols=81 Identities=19% Similarity=0.178 Sum_probs=68.3
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.
T Consensus 152 ~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T-------------~~L~~~~~~ADIvV~AvGkp~~i~~ 218 (288)
T PRK14171 152 KYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKT-------------HNLSSITSKADIVVAAIGSPLKLTA 218 (288)
T ss_pred HhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCCCccCH
Confidence 34557899999999999 799999999999999999986422 2455667899999999999999986
Q ss_pred HHHccCCCCeEEEEecCC
Q 037949 136 RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~ 153 (243)
+ ++|+|++|+++|+.
T Consensus 219 ~---~vk~GavVIDvGin 233 (288)
T PRK14171 219 E---YFNPESIVIDVGIN 233 (288)
T ss_pred H---HcCCCCEEEEeecc
Confidence 4 46899999999975
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.3e-06 Score=77.31 Aligned_cols=81 Identities=26% Similarity=0.277 Sum_probs=68.3
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.||+|+|+|-+ -+|+.++..|...||.|+++.... .++.+.++.||+++.|+|.++.++.+
T Consensus 150 ~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T-------------~~l~~~~~~ADIvI~AvG~p~~i~~~ 216 (282)
T PRK14169 150 YDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKT-------------RNLKQLTKEADILVVAVGVPHFIGAD 216 (282)
T ss_pred hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCC-------------CCHHHHHhhCCEEEEccCCcCccCHH
Confidence 4556899999999999 799999999999999999985432 23556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 217 ---~vk~GavVIDvGin~ 231 (282)
T PRK14169 217 ---AVKPGAVVIDVGISR 231 (282)
T ss_pred ---HcCCCcEEEEeeccc
Confidence 568999999999863
|
|
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.2e-06 Score=77.59 Aligned_cols=93 Identities=25% Similarity=0.231 Sum_probs=72.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC--------HHh----hh--cCCcEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT--------RED----VV--SEAGLFV 124 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~--------~~~----~~--~~aDvvi 124 (243)
..+|++|+|.|.|++|+.+++.++.+|+ +|++++.++.+...+...|++ +++ ..+ .. .+.|+++
T Consensus 201 ~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvl 280 (384)
T cd08265 201 FRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQV 280 (384)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEE
Confidence 4579999999999999999999999999 799999888887777777763 221 111 11 3689999
Q ss_pred EccCCh-hcccHHHHccCCCCeEEEEecCCC
Q 037949 125 TTTENA-DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 125 ~a~G~~-~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+++|.+ ..+. +.++.++++|+++++|...
T Consensus 281 d~~g~~~~~~~-~~~~~l~~~G~~v~~g~~~ 310 (384)
T cd08265 281 EAAGAPPATIP-QMEKSIAINGKIVYIGRAA 310 (384)
T ss_pred ECCCCcHHHHH-HHHHHHHcCCEEEEECCCC
Confidence 999864 3443 5688889999999998654
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.4e-06 Score=77.08 Aligned_cols=80 Identities=26% Similarity=0.291 Sum_probs=68.1
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.+
T Consensus 151 y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T-------------~nl~~~~~~ADIvIsAvGkp~~i~~~ 217 (282)
T PRK14166 151 YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-------------KDLSLYTRQADLIIVAAGCVNLLRSD 217 (282)
T ss_pred hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCccCHH
Confidence 4556899999999999 799999999999999999986532 23556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCC
Q 037949 137 HMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~ 153 (243)
++|+|++|+++|+.
T Consensus 218 ---~vk~GavVIDvGin 231 (282)
T PRK14166 218 ---MVKEGVIVVDVGIN 231 (282)
T ss_pred ---HcCCCCEEEEeccc
Confidence 46899999999975
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.5e-06 Score=77.13 Aligned_cols=89 Identities=19% Similarity=0.171 Sum_probs=72.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH------HH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV------RH 137 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~------~~ 137 (243)
+|.+||.|.+|..+|+.|...|.+|.++|+++++ .+.+...|.. ..++.++..++|+||.|.++...+.. ..
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g~ 81 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENGL 81 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccch
Confidence 6899999999999999999999999999999988 5555566876 45677888999999999877544321 24
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
++.+++|.++|+.+..+
T Consensus 82 ~~~~~~G~i~IDmSTis 98 (286)
T COG2084 82 LEGLKPGAIVIDMSTIS 98 (286)
T ss_pred hhcCCCCCEEEECCCCC
Confidence 56778999999987654
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.4e-06 Score=76.91 Aligned_cols=82 Identities=24% Similarity=0.230 Sum_probs=68.2
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..++.+.||+|+|+|.+ -+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.
T Consensus 150 ~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T-------------~~l~~~~~~ADIvV~AvGkp~~i~~ 216 (281)
T PRK14183 150 EYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFT-------------KDLKAHTKKADIVIVGVGKPNLITE 216 (281)
T ss_pred HcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------cCHHHHHhhCCEEEEecCcccccCH
Confidence 34557899999999999 899999999999999999885422 1345567899999999999999976
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ++++|++|+++|+..
T Consensus 217 ~---~vk~gavvIDvGin~ 232 (281)
T PRK14183 217 D---MVKEGAIVIDIGINR 232 (281)
T ss_pred H---HcCCCcEEEEeeccc
Confidence 4 468999999999753
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.5e-06 Score=77.03 Aligned_cols=82 Identities=24% Similarity=0.255 Sum_probs=68.7
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..++.+.||+|+|+|.+ -+|+.++..|...||.|+++.... .++.+.++.||+++.|+|.++.++.
T Consensus 148 ~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T-------------~~l~~~~~~ADIvIsAvGkp~~i~~ 214 (287)
T PRK14173 148 HYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKT-------------QDLPAVTRRADVLVVAVGRPHLITP 214 (287)
T ss_pred HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEecCCcCccCH
Confidence 34556899999999999 799999999999999999985432 2455667899999999999999976
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ++|+|++|+++|+..
T Consensus 215 ~---~vk~GavVIDVGin~ 230 (287)
T PRK14173 215 E---MVRPGAVVVDVGINR 230 (287)
T ss_pred H---HcCCCCEEEEccCcc
Confidence 4 458999999999863
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.5e-06 Score=77.01 Aligned_cols=82 Identities=23% Similarity=0.270 Sum_probs=68.3
Q ss_pred hccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+++|+|. |.+|+.+|..|...|+.|+++.... .++.+.++.||+|+.++|.++.++.
T Consensus 151 ~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t-------------~~l~~~~~~ADIVI~avg~~~~v~~ 217 (284)
T PRK14179 151 EYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRT-------------RNLAEVARKADILVVAIGRGHFVTK 217 (284)
T ss_pred HhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCC-------------CCHHHHHhhCCEEEEecCccccCCH
Confidence 3455689999999999 7999999999999999999983211 1466677899999999999999975
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ .+++|++|+++|+..
T Consensus 218 ~---~ik~GavVIDvgin~ 233 (284)
T PRK14179 218 E---FVKEGAVVIDVGMNR 233 (284)
T ss_pred H---HccCCcEEEEeccee
Confidence 3 379999999999763
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.5e-06 Score=77.48 Aligned_cols=80 Identities=23% Similarity=0.200 Sum_probs=66.9
Q ss_pred ccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEe-CCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 58 TDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTE-IDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 58 ~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d-~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
.+..+.||+|+|+| .|.+|+.+|..|...|+.|++++ +++ ++.+.++.||+|+.|+|.++.+..
T Consensus 152 ~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~--------------~l~e~~~~ADIVIsavg~~~~v~~ 217 (296)
T PRK14188 152 VHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR--------------DLPAVCRRADILVAAVGRPEMVKG 217 (296)
T ss_pred hCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC--------------CHHHHHhcCCEEEEecCChhhcch
Confidence 34568999999999 77999999999999999999995 433 245566789999999999998875
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
. .+++|.+++++|+..
T Consensus 218 ~---~lk~GavVIDvGin~ 233 (296)
T PRK14188 218 D---WIKPGATVIDVGINR 233 (296)
T ss_pred h---eecCCCEEEEcCCcc
Confidence 3 379999999999853
|
|
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.6e-06 Score=77.07 Aligned_cols=81 Identities=22% Similarity=0.235 Sum_probs=68.7
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.+
T Consensus 154 ~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T-------------~~l~~~~~~ADIvVsAvGkp~~i~~~ 220 (294)
T PRK14187 154 ITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSAT-------------RDLADYCSKADILVAAVGIPNFVKYS 220 (294)
T ss_pred hCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCcCccCHH
Confidence 4557899999999999 799999999999999999996532 23556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++++|++|+++|+..
T Consensus 221 ---~ik~gaiVIDVGin~ 235 (294)
T PRK14187 221 ---WIKKGAIVIDVGINS 235 (294)
T ss_pred ---HcCCCCEEEEecccc
Confidence 458999999999853
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.3e-06 Score=78.45 Aligned_cols=101 Identities=12% Similarity=0.132 Sum_probs=76.7
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCc-ccC------HHhhh---
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIP-VLT------REDVV--- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~-~~~------~~~~~--- 117 (243)
.|+++.+... ..+|++|+|.|+ |++|..+++.++.+|++|++++.++.+...+.. .|++ +++ ..+.+
T Consensus 139 A~~~l~~~~~-~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~ 217 (338)
T cd08295 139 AYAGFYEVCK-PKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRY 217 (338)
T ss_pred HHHHHHHhcC-CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHh
Confidence 3556543322 468999999998 899999999999999999998888888777766 7764 222 11211
Q ss_pred --cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 --SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 --~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++++|.. .+. +.++.++++|+++.+|..
T Consensus 218 ~~~gvd~v~d~~g~~-~~~-~~~~~l~~~G~iv~~G~~ 253 (338)
T cd08295 218 FPNGIDIYFDNVGGK-MLD-AVLLNMNLHGRIAACGMI 253 (338)
T ss_pred CCCCcEEEEECCCHH-HHH-HHHHHhccCcEEEEeccc
Confidence 3689999999874 454 579999999999999864
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.7e-06 Score=76.52 Aligned_cols=80 Identities=20% Similarity=0.238 Sum_probs=67.6
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.+
T Consensus 152 y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T-------------~dl~~~~k~ADIvIsAvGkp~~i~~~ 218 (282)
T PRK14180 152 YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------TDLKSHTTKADILIVAVGKPNFITAD 218 (282)
T ss_pred hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCC-------------CCHHHHhhhcCEEEEccCCcCcCCHH
Confidence 3556899999999999 799999999999999999996432 13455678999999999999999854
Q ss_pred HHccCCCCeEEEEecCC
Q 037949 137 HMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~ 153 (243)
++++|++|+++|+.
T Consensus 219 ---~vk~gavVIDvGin 232 (282)
T PRK14180 219 ---MVKEGAVVIDVGIN 232 (282)
T ss_pred ---HcCCCcEEEEeccc
Confidence 46899999999975
|
|
| >TIGR00465 ilvC ketol-acid reductoisomerase | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.8e-06 Score=77.84 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=65.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC-CchhHHHHhhcCCcccCHHhhhcCCcEEEEccCCh---hcccHHH
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI-DLICALQALTEGIPVLTREDVVSEAGLFVTTTENA---DIIMVRH 137 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~-~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~---~~i~~~~ 137 (243)
++|+++.|||+|.+|.++|+.++..|.+|++.+. ++.+...+...|+.+.+..++++.+|+|+.++... ..+..+.
T Consensus 1 l~~kkIgiIG~G~mG~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp~~~~~~v~~ei 80 (314)
T TIGR00465 1 LKGKTVAIIGYGSQGHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPDEVQHEVYEAEI 80 (314)
T ss_pred CCcCEEEEEeEcHHHHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCcHhHHHHHHHHH
Confidence 4689999999999999999999999998877544 44445555567887667777788999999997643 1222334
Q ss_pred HccCCCCeEEEEecCC
Q 037949 138 MKQMKNAAIVCNIGHF 153 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~ 153 (243)
...++++. ++.+.++
T Consensus 81 ~~~l~~g~-iVs~aaG 95 (314)
T TIGR00465 81 QPLLKEGK-TLGFSHG 95 (314)
T ss_pred HhhCCCCc-EEEEeCC
Confidence 45667665 5554444
|
This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.3e-06 Score=77.60 Aligned_cols=130 Identities=12% Similarity=0.054 Sum_probs=87.7
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH-------------------------
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR------------------------- 113 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~------------------------- 113 (243)
..+|++|+|.|+ |+||+.+++.++.+|++|++++.++++...+...|++ +++.
T Consensus 191 ~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (393)
T cd08246 191 VKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEAR 270 (393)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccc
Confidence 357899999997 9999999999999999998899988888778777753 2211
Q ss_pred --Hhh----h--c-CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHHhhcCeEEEeecCeeeeE
Q 037949 114 --EDV----V--S-EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEAYRGIKRITIKPQTDPWV 181 (243)
Q Consensus 114 --~~~----~--~-~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~~~~~~~~~i~~~~~~~~ 181 (243)
.+. . . ++|++++|+|. ..+. +.+..++++|+++.+|... ..++...+.. +...+.. ...+.
T Consensus 271 ~~~~~v~~l~~~~~g~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~----~~~~i~g-~~~~~ 343 (393)
T cd08246 271 RFGKAIWDILGGREDPDIVFEHPGR-ATFP-TSVFVCDRGGMVVICAGTTGYNHTYDNRYLWM----RQKRIQG-SHFAN 343 (393)
T ss_pred hHHHHHHHHhCCCCCCeEEEECCch-HhHH-HHHHHhccCCEEEEEcccCCCCCCCcHHHHhh----heeEEEe-cccCc
Confidence 111 1 1 68999999987 4454 4789999999999988542 2244443332 2222321 11112
Q ss_pred ccCchhhHHhhhcCCe
Q 037949 182 FPQTRRGIIILAERLL 197 (243)
Q Consensus 182 ~~~~~~ai~ll~~G~i 197 (243)
+.+..+++.++++|.+
T Consensus 344 ~~~~~~~~~~~~~~~l 359 (393)
T cd08246 344 DREAAEANRLVMKGRI 359 (393)
T ss_pred HHHHHHHHHHHHcCCc
Confidence 2232336788888876
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.8e-06 Score=76.89 Aligned_cols=82 Identities=27% Similarity=0.266 Sum_probs=69.1
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..++.+.||+|+|+|-+ -+|+.++..|...||.|++++... -++.+.++.||+++.|+|.++.+..
T Consensus 160 ~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T-------------~nl~~~~~~ADIvv~AvGk~~~i~~ 226 (299)
T PLN02516 160 RSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRT-------------PDPESIVREADIVIAAAGQAMMIKG 226 (299)
T ss_pred HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCccCH
Confidence 34557899999999999 799999999999999999995432 2456677899999999999999975
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ++|+|++|+++|+..
T Consensus 227 ~---~vk~gavVIDvGin~ 242 (299)
T PLN02516 227 D---WIKPGAAVIDVGTNA 242 (299)
T ss_pred H---HcCCCCEEEEeeccc
Confidence 4 468999999999863
|
|
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.4e-06 Score=78.29 Aligned_cols=93 Identities=17% Similarity=0.233 Sum_probs=72.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|+|.|++|+.+++.++.+|+ +|++++.++.++..+...|++ +++. .+.+ .+.|++++|
T Consensus 188 ~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~ 267 (373)
T cd08299 188 VTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEV 267 (373)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEEC
Confidence 4579999999999999999999999999 899999999998888777863 2321 1111 258999999
Q ss_pred cCChhcccHHHHccC-CCCeEEEEecCCC
Q 037949 127 TENADIIMVRHMKQM-KNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l-~~g~~vvnvg~~~ 154 (243)
+|.+..+.. .+..+ +++|+++.+|...
T Consensus 268 ~g~~~~~~~-~~~~~~~~~G~~v~~g~~~ 295 (373)
T cd08299 268 IGRLDTMKA-ALASCHEGYGVSVIVGVPP 295 (373)
T ss_pred CCCcHHHHH-HHHhhccCCCEEEEEccCC
Confidence 997666653 45544 5789999999753
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.5e-06 Score=75.67 Aligned_cols=90 Identities=13% Similarity=0.162 Sum_probs=70.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH------HH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV------RH 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~------~~ 137 (243)
.+|.|+|+|.+|..+|..+...|.+|+++|+++.+.......|... .+.++.++++|+|+.|+.....+.. ..
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~~ 82 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENGI 82 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcchH
Confidence 4799999999999999999999999999999998876666666643 4567778899999999764332211 13
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
+..++++.++++++...
T Consensus 83 ~~~~~~g~iiid~st~~ 99 (296)
T PRK11559 83 IEGAKPGTVVIDMSSIA 99 (296)
T ss_pred hhcCCCCcEEEECCCCC
Confidence 45678899999988764
|
|
| >PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.9e-06 Score=76.11 Aligned_cols=82 Identities=22% Similarity=0.226 Sum_probs=68.6
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..++.+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.++|.++.++.
T Consensus 150 ~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T-------------~nl~~~~~~ADIvI~AvGk~~~i~~ 216 (282)
T PRK14182 150 EARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRT-------------ADLAGEVGRADILVAAIGKAELVKG 216 (282)
T ss_pred HhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEecCCcCccCH
Confidence 34557899999999999 799999999999999999985432 2455667899999999999999986
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ++|+|++|+++|+..
T Consensus 217 ~---~ik~gaiVIDvGin~ 232 (282)
T PRK14182 217 A---WVKEGAVVIDVGMNR 232 (282)
T ss_pred H---HcCCCCEEEEeecee
Confidence 4 468999999999753
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=2e-06 Score=76.63 Aligned_cols=81 Identities=28% Similarity=0.337 Sum_probs=68.1
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.||+|+|+|-+ -+|+.++..|...||.|+++.... .++.+.++.||+++.|+|.++.++.+
T Consensus 152 ~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIvIsAvGkp~~i~~~ 218 (297)
T PRK14186 152 QQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRT-------------QDLASITREADILVAAAGRPNLIGAE 218 (297)
T ss_pred hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCcCccCHH
Confidence 3556899999999999 799999999999999999985432 24556678999999999999999754
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 219 ---~ik~gavVIDvGin~ 233 (297)
T PRK14186 219 ---MVKPGAVVVDVGIHR 233 (297)
T ss_pred ---HcCCCCEEEEecccc
Confidence 468999999999864
|
|
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.8e-06 Score=78.16 Aligned_cols=102 Identities=21% Similarity=0.191 Sum_probs=77.8
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----H---hhh--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----E---DVV-- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~---~~~-- 117 (243)
.++++.+.. ...+|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|++ +++. . +.+
T Consensus 165 a~~al~~~~-~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~ 243 (361)
T cd08231 165 VLAALDRAG-PVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRD 243 (361)
T ss_pred HHHHHHhcc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHH
Confidence 345554432 22389999999999999999999999999 999999988887777777764 2221 1 111
Q ss_pred ----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 ----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+.|++++|+|....+. ..++.++++|+++.+|..
T Consensus 244 ~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 282 (361)
T cd08231 244 ITGGRGADVVIEASGHPAAVP-EGLELLRRGGTYVLVGSV 282 (361)
T ss_pred HhCCCCCcEEEECCCChHHHH-HHHHHhccCCEEEEEcCC
Confidence 35899999998766565 578999999999999865
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.9e-06 Score=77.94 Aligned_cols=81 Identities=22% Similarity=0.258 Sum_probs=68.3
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+|+|+|-+ -+|+.++..|...||.|+++.... .++.+.++.||++|.|+|.++.++.+
T Consensus 208 ~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T-------------~nl~~~~~~ADIvIsAvGkp~~v~~d 274 (345)
T PLN02897 208 SGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFT-------------KDPEQITRKADIVIAAAGIPNLVRGS 274 (345)
T ss_pred hCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCC-------------CCHHHHHhhCCEEEEccCCcCccCHH
Confidence 3556899999999999 799999999999999999985432 23556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 275 ---~vk~GavVIDVGin~ 289 (345)
T PLN02897 275 ---WLKPGAVVIDVGTTP 289 (345)
T ss_pred ---HcCCCCEEEEccccc
Confidence 468999999999863
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.9e-06 Score=75.64 Aligned_cols=90 Identities=14% Similarity=0.212 Sum_probs=71.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH------HH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV------RH 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~------~~ 137 (243)
+++.|+|.|.+|..+|..+...|.+|+++|+++.+.......|.. +.++.++++++|+|+.|+.....+.. ..
T Consensus 2 ~~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~i 81 (296)
T PRK15461 2 AAIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENGV 81 (296)
T ss_pred CeEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcccH
Confidence 379999999999999999999999999999999987666666764 34567788899999999876542221 12
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
+..++++.++++.+...
T Consensus 82 ~~~l~~g~lvid~sT~~ 98 (296)
T PRK15461 82 CEGLSRDALVIDMSTIH 98 (296)
T ss_pred hhcCCCCCEEEECCCCC
Confidence 44578899999988764
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.4e-06 Score=75.66 Aligned_cols=87 Identities=14% Similarity=0.139 Sum_probs=69.2
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-cCCc-ccC-----HHhhh-----cCCcEEEEccCC
Q 037949 64 GKIAVDCGH-GDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-EGIP-VLT-----REDVV-----SEAGLFVTTTEN 129 (243)
Q Consensus 64 g~~vlViG~-G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~G~~-~~~-----~~~~~-----~~aDvvi~a~G~ 129 (243)
|++|+|.|+ |++|..+++.++.+|+ +|++++.++++.+.+.. .|++ +++ +.+.+ .++|++++++|.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 399999998 8999999999999999 89999988888766655 7764 221 22222 368999999988
Q ss_pred hhcccHHHHccCCCCeEEEEecC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.. + .+.++.++++|+++.+|.
T Consensus 235 ~~-~-~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EI-S-DTVISQMNENSHIILCGQ 255 (345)
T ss_pred HH-H-HHHHHHhccCCEEEEEee
Confidence 65 4 357999999999999884
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.9e-06 Score=71.11 Aligned_cols=102 Identities=22% Similarity=0.215 Sum_probs=76.0
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh-----hcC
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV-----VSE 119 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~-----~~~ 119 (243)
++++..... ..+|++++|.|+|.+|+.+++.++..|++|++++.++.+...+...|.+ +++ ..+. -..
T Consensus 123 ~~~l~~~~~-~~~~~~vli~g~~~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 201 (271)
T cd05188 123 YHALRRAGV-LKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGG 201 (271)
T ss_pred HHHHHhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCC
Confidence 344443322 2579999999999999999999999999999999998877666666643 222 1111 146
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.|++++++|....+. ..++.++++|+++++|...
T Consensus 202 ~d~vi~~~~~~~~~~-~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 202 ADVVIDAVGGPETLA-QALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred CCEEEECCCCHHHHH-HHHHhcccCCEEEEEccCC
Confidence 899999988744454 4688899999999998764
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.1e-06 Score=75.77 Aligned_cols=81 Identities=31% Similarity=0.324 Sum_probs=69.0
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.|++|+|+|.+ .+|+.++..+...|++|++++.+.. ++.+.++.||++|.++|.+..++.
T Consensus 145 ~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~-------------~L~~~~~~ADIvI~Avgk~~lv~~ 211 (279)
T PRK14178 145 EYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE-------------NLKAELRQADILVSAAGKAGFITP 211 (279)
T ss_pred HcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh-------------HHHHHHhhCCEEEECCCcccccCH
Confidence 34557899999999999 8999999999999999999976542 345667899999999998899986
Q ss_pred HHHccCCCCeEEEEecCC
Q 037949 136 RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~ 153 (243)
+. +|+|++|+++|+.
T Consensus 212 ~~---vk~GavVIDVgi~ 226 (279)
T PRK14178 212 DM---VKPGATVIDVGIN 226 (279)
T ss_pred HH---cCCCcEEEEeecc
Confidence 54 5999999999975
|
|
| >PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=98.36 E-value=2e-06 Score=78.10 Aligned_cols=81 Identities=23% Similarity=0.281 Sum_probs=68.6
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.||+|+|+|-+ -+|+.++..|...||.|+++.... .++.+.++.||++|.|+|.++.++.+
T Consensus 225 y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T-------------~nl~~~~r~ADIVIsAvGkp~~i~~d 291 (364)
T PLN02616 225 YNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITREADIIISAVGQPNMVRGS 291 (364)
T ss_pred hCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCcCCHH
Confidence 4556899999999999 799999999999999999985432 24556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 292 ---~vK~GAvVIDVGIn~ 306 (364)
T PLN02616 292 ---WIKPGAVVIDVGINP 306 (364)
T ss_pred ---HcCCCCEEEeccccc
Confidence 468999999999863
|
|
| >PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.5e-06 Score=75.62 Aligned_cols=82 Identities=17% Similarity=0.206 Sum_probs=68.0
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhC----CCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAV----GARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~----Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~ 131 (243)
..++.+.||+|+|+|-+ -+|+.++..|... +|.|++++... .++.+.++.||+++.|+|.++
T Consensus 146 ~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T-------------~~l~~~~~~ADIvV~AvG~p~ 212 (287)
T PRK14181 146 YYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQS-------------ENLTEILKTADIIIAAIGVPL 212 (287)
T ss_pred HhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCcC
Confidence 34557899999999999 7999999999988 78999885422 245566789999999999999
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++.+ ++|+|++|+++|+..
T Consensus 213 ~i~~~---~ik~GavVIDvGin~ 232 (287)
T PRK14181 213 FIKEE---MIAEKAVIVDVGTSR 232 (287)
T ss_pred ccCHH---HcCCCCEEEEecccc
Confidence 99864 468999999999863
|
|
| >PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.5e-06 Score=75.57 Aligned_cols=81 Identities=23% Similarity=0.260 Sum_probs=68.0
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHh--CCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhccc
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKA--VGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIM 134 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~--~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~ 134 (243)
.++.+.||+|+|+|.+ -+|+.++..|.. .+|.|++++... .++.+.++.||+++.|+|.++.++
T Consensus 152 ~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T-------------~~l~~~~k~ADIvV~AvGkp~~i~ 218 (284)
T PRK14193 152 YDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGT-------------RDLAAHTRRADIIVAAAGVAHLVT 218 (284)
T ss_pred hCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCC-------------CCHHHHHHhCCEEEEecCCcCccC
Confidence 4556899999999999 799999999988 799999996532 245667789999999999999998
Q ss_pred HHHHccCCCCeEEEEecCCC
Q 037949 135 VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+ ++|+|++|+++|+..
T Consensus 219 ~~---~ik~GavVIDvGin~ 235 (284)
T PRK14193 219 AD---MVKPGAAVLDVGVSR 235 (284)
T ss_pred HH---HcCCCCEEEEccccc
Confidence 64 468999999999863
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.5e-06 Score=77.17 Aligned_cols=91 Identities=22% Similarity=0.214 Sum_probs=72.7
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcc----c---CHHhhhcCCcEEEEcc---C--C
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPV----L---TREDVVSEAGLFVTTT---E--N 129 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~----~---~~~~~~~~aDvvi~a~---G--~ 129 (243)
..-+|+|+|+|-+|...|+.+..+|++|++.|+|..|+.+--. .+.++ . ++++.+..+|++|.+. | .
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgaka 246 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKA 246 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCC
Confidence 4467999999999999999999999999999999988744332 23332 1 2467788999998773 4 3
Q ss_pred hhcccHHHHccCCCCeEEEEecCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|.++.++++..||||++++.+++-
T Consensus 247 PkLvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 247 PKLVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred ceehhHHHHHhcCCCcEEEEEEEc
Confidence 567888889999999999998764
|
|
| >PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.2e-06 Score=74.95 Aligned_cols=82 Identities=23% Similarity=0.235 Sum_probs=68.6
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHh----CCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKA----VGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~----~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~ 131 (243)
..++.+.||+|+|+|-+ -+|+.++..|.. .||+|++++.... ++.+.++.||+++.|+|.+.
T Consensus 150 ~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~-------------~l~~~~~~ADIVI~AvG~p~ 216 (286)
T PRK14184 150 RYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTP-------------DLAEECREADFLFVAIGRPR 216 (286)
T ss_pred HhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCch-------------hHHHHHHhCCEEEEecCCCC
Confidence 34557899999999999 799999999998 8999999875442 35566789999999999999
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++.+. +++|++|+++|+..
T Consensus 217 li~~~~---vk~GavVIDVGi~~ 236 (286)
T PRK14184 217 FVTADM---VKPGAVVVDVGINR 236 (286)
T ss_pred cCCHHH---cCCCCEEEEeeeec
Confidence 998654 49999999999753
|
|
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=98.32 E-value=8.4e-06 Score=72.88 Aligned_cols=103 Identities=17% Similarity=0.131 Sum_probs=76.6
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCc-ccC----HH----hhh--c
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIP-VLT----RE----DVV--S 118 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~-~~~----~~----~~~--~ 118 (243)
|+++.+......+|++|+|.|+|.+|+.+++.++..| ++|++++.++.+.......|++ +++ .. +.. .
T Consensus 155 ~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~ 234 (340)
T cd05284 155 YHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGR 234 (340)
T ss_pred HHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhCCC
Confidence 4555433112357999999999999999999999999 7999998888877666666753 222 11 112 2
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.|++++++|....+. +.++.++++|+++..|..+
T Consensus 235 ~~dvvld~~g~~~~~~-~~~~~l~~~g~~i~~g~~~ 269 (340)
T cd05284 235 GADAVIDFVGSDETLA-LAAKLLAKGGRYVIVGYGG 269 (340)
T ss_pred CCCEEEEcCCCHHHHH-HHHHHhhcCCEEEEEcCCC
Confidence 5899999998755554 5789999999999998765
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.1e-06 Score=75.17 Aligned_cols=100 Identities=19% Similarity=0.188 Sum_probs=75.8
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|+++.+... ..+|++|+|.|+ |++|..+++.++.+|++|++++.++.+...+...|++ +++ ..+.+
T Consensus 131 a~~al~~~~~-~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~ 209 (329)
T cd08294 131 AYFGLLEICK-PKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP 209 (329)
T ss_pred HHHHHHHhcC-CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC
Confidence 3556533222 357999999994 8999999999999999999999888888777777864 222 11111
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.+.|++++++|.. .+. ..++.++++|+++.+|.
T Consensus 210 ~gvd~vld~~g~~-~~~-~~~~~l~~~G~iv~~g~ 242 (329)
T cd08294 210 DGIDCYFDNVGGE-FSS-TVLSHMNDFGRVAVCGS 242 (329)
T ss_pred CCcEEEEECCCHH-HHH-HHHHhhccCCEEEEEcc
Confidence 3589999999874 443 57899999999999885
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.6e-06 Score=74.81 Aligned_cols=81 Identities=19% Similarity=0.226 Sum_probs=67.4
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhC----CCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhc
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAV----GARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~----Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~ 132 (243)
.+..+.||+|+|+|-+ -+|+.++..|... +|.|+++.... .++.+.++.||+++.|+|.++.
T Consensus 151 ~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T-------------~nl~~~~~~ADIvIsAvGkp~~ 217 (293)
T PRK14185 151 YHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRS-------------KNLKKECLEADIIIAALGQPEF 217 (293)
T ss_pred hCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCC-------------CCHHHHHhhCCEEEEccCCcCc
Confidence 3556899999999999 7999999999987 69999985432 2455667899999999999999
Q ss_pred ccHHHHccCCCCeEEEEecCCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++.+ ++++|++|+++|+..
T Consensus 218 i~~~---~vk~gavVIDvGin~ 236 (293)
T PRK14185 218 VKAD---MVKEGAVVIDVGTTR 236 (293)
T ss_pred cCHH---HcCCCCEEEEecCcc
Confidence 9754 568999999999853
|
|
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.9e-06 Score=75.09 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=73.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHh-CCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHhhhc----CCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKA-VGAR-VMGTEIDLICALQALTEGIP-VLT-----REDVVS----EAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~-~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~~----~aDvvi~a~G 128 (243)
..+|++|+|.|.|.+|+.+++.++. +|++ |++++.++.+...+...|++ +++ ..+.+. ++|++++++|
T Consensus 158 ~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~~g 237 (339)
T PRK10083 158 PTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTLIIDAAC 237 (339)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCEEEECCC
Confidence 3579999999999999999999996 6995 77789999888777778875 332 222221 3579999999
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+..+. +.++.++++|+++++|..+
T Consensus 238 ~~~~~~-~~~~~l~~~G~~v~~g~~~ 262 (339)
T PRK10083 238 HPSILE-EAVTLASPAARIVLMGFSS 262 (339)
T ss_pred CHHHHH-HHHHHhhcCCEEEEEccCC
Confidence 766665 5789999999999998754
|
|
| >PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.6e-06 Score=74.95 Aligned_cols=82 Identities=16% Similarity=0.185 Sum_probs=67.8
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhC----CCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAV----GARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~----Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~ 131 (243)
..++.+.||+|+|+|-+ -+|+.++..|... +|.|+++.... .++.+.++.||+|+.|+|.++
T Consensus 154 ~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T-------------~~l~~~~~~ADIvVsAvGkp~ 220 (297)
T PRK14168 154 RSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRS-------------KNLARHCQRADILIVAAGVPN 220 (297)
T ss_pred HhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCC-------------cCHHHHHhhCCEEEEecCCcC
Confidence 34557899999999999 7999999999988 78999985432 245566789999999999999
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++.+ ++|+|++|+++|+..
T Consensus 221 ~i~~~---~ik~gavVIDvGin~ 240 (297)
T PRK14168 221 LVKPE---WIKPGATVIDVGVNR 240 (297)
T ss_pred ccCHH---HcCCCCEEEecCCCc
Confidence 99864 468999999999753
|
|
| >PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=4e-06 Score=74.69 Aligned_cols=81 Identities=19% Similarity=0.151 Sum_probs=67.3
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhC----CCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhc
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAV----GARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~----Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~ 132 (243)
.++.+.||+|+|+|-+ -+|+.++..|... +|.|+++.... .++.+.++.||+++.|+|.++.
T Consensus 151 ~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T-------------~~l~~~~~~ADIvIsAvGkp~~ 217 (297)
T PRK14167 151 AGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRT-------------DDLAAKTRRADIVVAAAGVPEL 217 (297)
T ss_pred hCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCcCc
Confidence 3556899999999999 7999999999877 89999985432 2355667899999999999999
Q ss_pred ccHHHHccCCCCeEEEEecCCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++.+ ++|+|++|+++|+..
T Consensus 218 i~~~---~ik~gaiVIDvGin~ 236 (297)
T PRK14167 218 IDGS---MLSEGATVIDVGINR 236 (297)
T ss_pred cCHH---HcCCCCEEEEccccc
Confidence 9864 468999999999753
|
|
| >COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.30 E-value=3e-06 Score=75.03 Aligned_cols=90 Identities=19% Similarity=0.171 Sum_probs=72.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcCCcccCHHhhhcCCcEEEEccCC---hhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEGIPVLTREDVVSEAGLFVTTTEN---ADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~---~~~i~~~ 136 (243)
.++||+|+|||||.-|.+-|+.+|..|.+|++-=+.... ...|..+|+++.+.+++++.||+|+..+.. +.+...+
T Consensus 15 ~LkgK~iaIIGYGsQG~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~PDe~q~~vy~~~ 94 (338)
T COG0059 15 LLKGKKVAIIGYGSQGHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLPDEQQKEVYEKE 94 (338)
T ss_pred HhcCCeEEEEecChHHHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCchhhHHHHHHHH
Confidence 478999999999999999999999999999886554333 678889999999999999999999887643 3344434
Q ss_pred HHccCCCCeEEEEe
Q 037949 137 HMKQMKNAAIVCNI 150 (243)
Q Consensus 137 ~l~~l~~g~~vvnv 150 (243)
.-..|+.|..+...
T Consensus 95 I~p~Lk~G~aL~Fa 108 (338)
T COG0059 95 IAPNLKEGAALGFA 108 (338)
T ss_pred hhhhhcCCceEEec
Confidence 45677888766654
|
|
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.29 E-value=6.7e-06 Score=74.10 Aligned_cols=140 Identities=16% Similarity=0.182 Sum_probs=91.2
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hhc-
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----RED----VVS- 118 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~~- 118 (243)
|+++.+... ..+|++|+|.|.|.+|..+++.++..|+ +|++++.++.+...+...|.+ +++ ..+ ...
T Consensus 164 ~~~~~~~~~-~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
T cd08240 164 YSAVKKLMP-LVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGG 242 (350)
T ss_pred HHHHHhccc-CCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHHHHhCC
Confidence 455544322 2378999999999999999999999999 788899888887777666753 222 111 112
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCC
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERL 196 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ 196 (243)
+.|++++++|....+. ..++.++++|+++.+|.... .++...+.. +...+.... .+...+..+++.++++|.
T Consensus 243 ~~d~vid~~g~~~~~~-~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~----~~~~i~~~~-~~~~~~~~~~~~ll~~~~ 316 (350)
T cd08240 243 GVDAVIDFVNNSATAS-LAFDILAKGGKLVLVGLFGGEATLPLPLLPL----RALTIQGSY-VGSLEELRELVALAKAGK 316 (350)
T ss_pred CCcEEEECCCCHHHHH-HHHHHhhcCCeEEEECCCCCCCcccHHHHhh----cCcEEEEcc-cCCHHHHHHHHHHHHcCC
Confidence 5899999998766665 57999999999999887542 233333222 112222211 111122233678888887
Q ss_pred e
Q 037949 197 L 197 (243)
Q Consensus 197 i 197 (243)
+
T Consensus 317 i 317 (350)
T cd08240 317 L 317 (350)
T ss_pred C
Confidence 5
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.5e-05 Score=70.76 Aligned_cols=139 Identities=15% Similarity=0.196 Sum_probs=89.3
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC--CchhHHHHhhcCCcccC-----HHhh----h-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI--DLICALQALTEGIPVLT-----REDV----V- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~--~~~r~~~a~~~G~~~~~-----~~~~----~- 117 (243)
.|+++..... ..+|++|+|.|.|.+|..+++.+++.|++|+++.. ++.+...+...|++.++ ..+. .
T Consensus 152 a~~~l~~~~~-~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~ 230 (306)
T cd08258 152 AVHAVAERSG-IRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAVNGGEEDLAELVNEITD 230 (306)
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCcccCCCcCCHHHHHHHHcC
Confidence 3455433222 35789999999999999999999999999877633 44455445556653111 1111 1
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA 193 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~ 193 (243)
.+.|+++++.|....+. ..+..++++|+++.+|... .+++...+.. +.+++.. +..+...+.++++++++
T Consensus 231 ~~~vd~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~~~~ 304 (306)
T cd08258 231 GDGADVVIECSGAVPALE-QALELLRKGGRIVQVGIFGPLAASIDVERIIQ----KELSVIG-SRSSTPASWETALRLLA 304 (306)
T ss_pred CCCCCEEEECCCChHHHH-HHHHHhhcCCEEEEEcccCCCCcccCHHHHhh----cCcEEEE-EecCchHhHHHHHHHHh
Confidence 35899999987765554 4688899999999998753 3445444433 3344543 22334455444677777
Q ss_pred cC
Q 037949 194 ER 195 (243)
Q Consensus 194 ~G 195 (243)
+|
T Consensus 305 ~~ 306 (306)
T cd08258 305 SG 306 (306)
T ss_pred cC
Confidence 65
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.4e-05 Score=68.76 Aligned_cols=91 Identities=20% Similarity=0.188 Sum_probs=69.0
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeCC----chhH--------HHHhhcCC-cc-cCHHhhhcCCcE
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEID----LICA--------LQALTEGI-PV-LTREDVVSEAGL 122 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~----~~r~--------~~a~~~G~-~~-~~~~~~~~~aDv 122 (243)
..+.+++++|+|+|..|++++..+...|+ +|+++|++ ..|. ..+...+. .. .++.+.++++|+
T Consensus 21 ~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~~~l~~~l~~~dv 100 (226)
T cd05311 21 KKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTGGTLKEALKGADV 100 (226)
T ss_pred CCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCcccCCHHHHHhcCCE
Confidence 35789999999999999999999999998 49999998 3332 12222221 11 245567788999
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEec
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg 151 (243)
+|.+++ ..+++.+.++.|.++.++....
T Consensus 101 lIgaT~-~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 101 FIGVSR-PGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred EEeCCC-CCCCCHHHHHhhCCCCEEEEeC
Confidence 999998 7778777888888887777655
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=4.4e-06 Score=73.21 Aligned_cols=37 Identities=27% Similarity=0.240 Sum_probs=33.6
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
++||+++|+|++ +||+++|+.|...|++|+++++++.
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~ 44 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA 44 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH
Confidence 679999999997 7999999999999999999987653
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.5e-06 Score=72.58 Aligned_cols=140 Identities=14% Similarity=0.160 Sum_probs=80.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCC--cccCHHhhhcCCcEEEEccCChhcccHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGI--PVLTREDVVSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~--~~~~~~~~~~~aDvvi~a~G~~~~i~~~~ 137 (243)
+..+.++|+|+| +||+++++.+...|++|.+.|++....+... .++. +.. .-.+||- ++.-...++. +.
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~-----aF~~DVS-~a~~v~~~l~-e~ 84 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHS-----AFSCDVS-KAHDVQNTLE-EM 84 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccc-----eeeeccC-cHHHHHHHHH-HH
Confidence 457899999999 8999999999999999999999877543322 2221 111 0123322 1111122232 34
Q ss_pred HccC-CCCeEEEEecCCCCC----CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh--h--c-CCeecccCCCCCc
Q 037949 138 MKQM-KNAAIVCNIGHFDNE----IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL--A--E-RLLMNLGCPTGHP 207 (243)
Q Consensus 138 l~~l-~~g~~vvnvg~~~~~----id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll--~--~-G~ivNl~s~~g~p 207 (243)
.+.+ ++..+|+++|+-.+. ...+.|... +..+..+.++.... +.+.+ . + ++|||++|+.|.-
T Consensus 85 ~k~~g~psvlVncAGItrD~~Llrmkq~qwd~v-------i~vNL~gvfl~tqa-a~r~~~~~~~~~~sIiNvsSIVGki 156 (256)
T KOG1200|consen 85 EKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSV-------IAVNLTGVFLVTQA-AVRAMVMNQQQGLSIINVSSIVGKI 156 (256)
T ss_pred HHhcCCCcEEEEcCccccccceeeccHHHHHHH-------HHhhchhhHHHHHH-HHHHHHHhcCCCceEEeehhhhccc
Confidence 4444 566666677776422 333444331 22333344444433 44442 2 2 3999999998777
Q ss_pred cccccchHH
Q 037949 208 SFVMSCSFT 216 (243)
Q Consensus 208 ~~~~~~~~~ 216 (243)
+.+-.--|+
T Consensus 157 GN~GQtnYA 165 (256)
T KOG1200|consen 157 GNFGQTNYA 165 (256)
T ss_pred ccccchhhh
Confidence 666555443
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.28 E-value=5.8e-06 Score=74.68 Aligned_cols=85 Identities=22% Similarity=0.226 Sum_probs=60.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC---------c-ccCHHhhhcCCcEE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI---------P-VLTREDVVSEAGLF 123 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~---------~-~~~~~~~~~~aDvv 123 (243)
++|.|+|+|.||..+|..+...|.+|+++|+++..+..+.. .|. . +.++++++.+||+|
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDlV 87 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADFI 87 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCEE
Confidence 68999999999999999999999999999999876533221 111 1 12456778899999
Q ss_pred EEccCCh----hcccHHHHccCCCCeEEEE
Q 037949 124 VTTTENA----DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 124 i~a~G~~----~~i~~~~l~~l~~g~~vvn 149 (243)
++|.... ..+-.+.-+.+++++++..
T Consensus 88 iEavpE~l~vK~~lf~~l~~~~~~~aIlaS 117 (321)
T PRK07066 88 QESAPEREALKLELHERISRAAKPDAIIAS 117 (321)
T ss_pred EECCcCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9996532 2222333456688886653
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.28 E-value=5.1e-06 Score=74.31 Aligned_cols=91 Identities=19% Similarity=0.257 Sum_probs=69.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCCc---ccCHHhhhcCCcEEEEccCChhc--ccHH
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGIP---VLTREDVVSEAGLFVTTTENADI--IMVR 136 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~~---~~~~~~~~~~aDvvi~a~G~~~~--i~~~ 136 (243)
.++|+|+|+|.||..++..++..|. +|+++|+++.+...+...|.. ..+..+.+.++|+|+.|+..... +-.+
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~~ 85 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAAE 85 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence 4689999999999999999999985 899999999887777666742 23456677899999999865332 1123
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
....++++.+|+++|...
T Consensus 86 l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 86 IAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHhhCCCCCEEEeCccch
Confidence 345678888888887653
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.1e-06 Score=77.61 Aligned_cols=137 Identities=16% Similarity=0.186 Sum_probs=80.1
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh----hcCCcccCHHhh-hcCCcEEEEccCChhccc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL----TEGIPVLTREDV-VSEAGLFVTTTENADIIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~----~~G~~~~~~~~~-~~~aDvvi~a~G~~~~i~ 134 (243)
.+.||+|+|+|+. +||..+|..+...|++++.+.+...|++... +.+. .++. .-.+|+-- ....+..++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~----~~~v~~~~~Dvs~-~~~~~~~~~ 83 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGS----LEKVLVLQLDVSD-EESVKKFVE 83 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCC----cCccEEEeCccCC-HHHHHHHHH
Confidence 3689999999998 9999999999999998887777666654331 1111 0000 01222220 001112221
Q ss_pred H--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCCC
Q 037949 135 V--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPTG 205 (243)
Q Consensus 135 ~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~g 205 (243)
. ..|+ +-+-.|+|+|... ...+..++.. .++.|+.+..+..+. ++..|. +|.||+++|+.|
T Consensus 84 ~~~~~fg--~vDvLVNNAG~~~~~~~~~~~~~~~~~-------~mdtN~~G~V~~Tk~-alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 84 WAIRHFG--RVDVLVNNAGISLVGFLEDTDIEDVRN-------VMDTNVFGTVYLTKA-ALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred HHHHhcC--CCCEEEecCccccccccccCcHHHHHH-------HhhhhchhhHHHHHH-HHHHhhhcCCCeEEEEecccc
Confidence 1 2344 4589999999874 1223333322 133455444444444 777662 399999999887
Q ss_pred Ccccccc
Q 037949 206 HPSFVMS 212 (243)
Q Consensus 206 ~p~~~~~ 212 (243)
+-..-..
T Consensus 154 ~~~~P~~ 160 (282)
T KOG1205|consen 154 KMPLPFR 160 (282)
T ss_pred ccCCCcc
Confidence 6554443
|
|
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=98.27 E-value=8.4e-06 Score=73.12 Aligned_cols=101 Identities=17% Similarity=0.158 Sum_probs=75.8
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh-h---h--
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED-V---V-- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~-~---~-- 117 (243)
++++... . ..+|++|+|.|.|.+|+.+++.++..|++ |++++.++.+...+...|++ +++ ..+ . .
T Consensus 158 ~~~~~~~-~-~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~~ 235 (345)
T cd08287 158 HHAAVSA-G-VRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELTGG 235 (345)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhcCC
Confidence 4554332 2 45799999999999999999999999995 78888888777666667763 222 111 1 1
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|++++++|....++ ..++.++++++++..|...
T Consensus 236 ~~~d~il~~~g~~~~~~-~~~~~l~~~g~~v~~g~~~ 271 (345)
T cd08287 236 VGADAVLECVGTQESME-QAIAIARPGGRVGYVGVPH 271 (345)
T ss_pred CCCCEEEECCCCHHHHH-HHHHhhccCCEEEEecccC
Confidence 25899999998766665 4789999999999988654
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=6.3e-06 Score=72.43 Aligned_cols=36 Identities=25% Similarity=0.248 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ +||+++|+.+...|++|+++++++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~ 41 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE 41 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH
Confidence 578999999984 899999999999999999998875
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.7e-06 Score=73.64 Aligned_cols=89 Identities=17% Similarity=0.240 Sum_probs=67.0
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-c-ccCHHhhhcCCcEEEEccCChhccc--HHHHccC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-P-VLTREDVVSEAGLFVTTTENADIIM--VRHMKQM 141 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~-~~~~~~~~~~aDvvi~a~G~~~~i~--~~~l~~l 141 (243)
+|.|+|+|.||..+|..++..|.+|+++|+++.+...+...|. . ..+..+.+.++|+|+.|+....... .+....+
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~l 81 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPAL 81 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999999999988777776664 2 2222345778999999976543211 2334556
Q ss_pred CCCeEEEEecCCC
Q 037949 142 KNAAIVCNIGHFD 154 (243)
Q Consensus 142 ~~g~~vvnvg~~~ 154 (243)
+++.++.++|...
T Consensus 82 ~~~~ii~d~~Svk 94 (279)
T PRK07417 82 PPEAIVTDVGSVK 94 (279)
T ss_pred CCCcEEEeCcchH
Confidence 7888888877654
|
|
| >COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.25 E-value=4.7e-06 Score=73.28 Aligned_cols=81 Identities=22% Similarity=0.240 Sum_probs=68.6
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.|++++|+|.+ -+|+.+++.|...++.|.+++.... ++.+.++.||+++.|+|.++.+..
T Consensus 150 ~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~-------------~l~~~~k~ADIvv~AvG~p~~i~~- 215 (283)
T COG0190 150 YGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTK-------------DLASITKNADIVVVAVGKPHFIKA- 215 (283)
T ss_pred hCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCC-------------CHHHHhhhCCEEEEecCCcccccc-
Confidence 3557899999999999 6899999999999999999965432 344567899999999999999975
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
+++++|++|+.+|+..
T Consensus 216 --d~vk~gavVIDVGinr 231 (283)
T COG0190 216 --DMVKPGAVVIDVGINR 231 (283)
T ss_pred --ccccCCCEEEecCCcc
Confidence 4579999999999863
|
|
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=98.24 E-value=9.9e-06 Score=72.74 Aligned_cols=93 Identities=11% Similarity=0.131 Sum_probs=72.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCc-ccCH-----Hh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIP-VLTR-----ED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~----~~--~~aDvvi~a~ 127 (243)
..+|++++|.|+|.+|..+++.++.+| .+|++++.++.+...+...|++ +++. .+ .. .+.|++++|+
T Consensus 164 ~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~ 243 (345)
T cd08286 164 VKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAV 243 (345)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCCCCEEEECC
Confidence 357999999999999999999999999 6899999988887666667763 2221 11 11 3599999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|.+..+. ..++.++++|++++.|..+
T Consensus 244 g~~~~~~-~~~~~l~~~g~~v~~g~~~ 269 (345)
T cd08286 244 GIPATFE-LCQELVAPGGHIANVGVHG 269 (345)
T ss_pred CCHHHHH-HHHHhccCCcEEEEecccC
Confidence 8766654 4678899999999998654
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.4e-05 Score=73.43 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=75.3
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhc-CCcccC------HHhhh----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTE-GIPVLT------REDVV---- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~-G~~~~~------~~~~~---- 117 (243)
.|+++... . ..+|++|+|.|+|.+|..+++.++..|+ +|++++.++.+...+... +..+++ ..+.+
T Consensus 173 a~~~l~~~-~-~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~ 250 (386)
T cd08283 173 GYHAAELA-E-VKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEVDDVVEALRELT 250 (386)
T ss_pred hHHHHhhc-c-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHc
Confidence 35555322 2 3579999999999999999999999998 699999999888777666 443322 11111
Q ss_pred --cCCcEEEEccCCh---------------------hcccHHHHccCCCCeEEEEecCCC
Q 037949 118 --SEAGLFVTTTENA---------------------DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 --~~aDvvi~a~G~~---------------------~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|++++|+|.. ..++ +.++.++++|+++++|...
T Consensus 251 ~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~G~iv~~g~~~ 309 (386)
T cd08283 251 GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALR-EAIQAVRKGGTVSIIGVYG 309 (386)
T ss_pred CCCCCCEEEECCCCcccccccccccccccccccCchHHHH-HHHHHhccCCEEEEEcCCC
Confidence 2589999998742 2454 5789999999999998653
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.2e-06 Score=74.15 Aligned_cols=88 Identities=18% Similarity=0.192 Sum_probs=62.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-------cC-----------------Cc-ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-------EG-----------------IP-VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-------~G-----------------~~-~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++++++.+.. .+ .. +.+..+.+++
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVAD 81 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhcC
Confidence 57999999999999999999999999999999987655331 11 11 1234566789
Q ss_pred CcEEEEccCChhcccH----HHHccCCCCeEE-EEecC
Q 037949 120 AGLFVTTTENADIIMV----RHMKQMKNAAIV-CNIGH 152 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~----~~l~~l~~g~~v-vnvg~ 152 (243)
+|+|++|......+.. +..+.++++.++ +|.+.
T Consensus 82 aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt 119 (288)
T PRK09260 82 ADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTST 119 (288)
T ss_pred CCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence 9999999866532222 223556788766 46554
|
|
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=98.22 E-value=8.3e-06 Score=70.81 Aligned_cols=101 Identities=23% Similarity=0.281 Sum_probs=76.9
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcC-Cc-ccCHH-hh--hcCCcEEE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEG-IP-VLTRE-DV--VSEAGLFV 124 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G-~~-~~~~~-~~--~~~aDvvi 124 (243)
++++... . ..+|++++|.|+|.+|+.+++.++.+|++ |++++.++++...+...| .+ +.... +. -.+.|+++
T Consensus 87 ~~~~~~~-~-~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~vl 164 (277)
T cd08255 87 LNGVRDA-E-PRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEIGGRGADVVI 164 (277)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchhhhcCCCCCEEE
Confidence 4454332 2 35799999999999999999999999998 999999988887777777 32 22221 11 13689999
Q ss_pred EccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 125 TTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 125 ~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+++|....+. ..++.++++++++++|..+
T Consensus 165 ~~~~~~~~~~-~~~~~l~~~g~~~~~g~~~ 193 (277)
T cd08255 165 EASGSPSALE-TALRLLRDRGRVVLVGWYG 193 (277)
T ss_pred EccCChHHHH-HHHHHhcCCcEEEEEeccC
Confidence 9988766554 5789999999999988754
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=8.1e-06 Score=72.77 Aligned_cols=80 Identities=20% Similarity=0.220 Sum_probs=66.8
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHh----CCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhc
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKA----VGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~----~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~ 132 (243)
.++.+.||+|+|+|-+ -+|+.++..|.. .|++|+++..+.. ++.+.++.||++|.++|.++.
T Consensus 153 y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~-------------~l~~~~~~ADIvI~Avg~~~l 219 (295)
T PRK14174 153 YNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATK-------------DIPSYTRQADILIAAIGKARF 219 (295)
T ss_pred hCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCch-------------hHHHHHHhCCEEEEecCccCc
Confidence 3556899999999999 799999999987 6899999876543 245567899999999999999
Q ss_pred ccHHHHccCCCCeEEEEecCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~ 153 (243)
++.+.+ |+|++++++|+.
T Consensus 220 i~~~~v---k~GavVIDVgi~ 237 (295)
T PRK14174 220 ITADMV---KPGAVVIDVGIN 237 (295)
T ss_pred cCHHHc---CCCCEEEEeecc
Confidence 986544 999999999975
|
|
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.5e-05 Score=58.02 Aligned_cols=65 Identities=26% Similarity=0.446 Sum_probs=55.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~ 139 (243)
.+.+++++|+|+|.+|+.++..+...| .+|.++|+ |+++.|++.+..+..+.+.
T Consensus 20 ~~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r-------------------------di~i~~~~~~~~~~~~~~~ 74 (86)
T cd05191 20 SLKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR-------------------------DILVTATPAGVPVLEEATA 74 (86)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC-------------------------CEEEEcCCCCCCchHHHHH
Confidence 478999999999999999999999984 58888877 9999999988887655577
Q ss_pred cCCCCeEEEEe
Q 037949 140 QMKNAAIVCNI 150 (243)
Q Consensus 140 ~l~~g~~vvnv 150 (243)
.++++.++++.
T Consensus 75 ~~~~~~~v~~~ 85 (86)
T cd05191 75 KINEGAVVIDL 85 (86)
T ss_pred hcCCCCEEEec
Confidence 88888887764
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.6e-05 Score=71.46 Aligned_cols=93 Identities=19% Similarity=0.174 Sum_probs=72.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH------Hhhh-----cCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR------EDVV-----SEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~------~~~~-----~~aDvvi~a~G 128 (243)
..+|++++|.|.|.+|+.+++.++.+|++|++++.++.+...+...|++ +++. .+.+ ..+|++++|+|
T Consensus 163 ~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g 242 (345)
T cd08260 163 VKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALG 242 (345)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCCCCEEEEcCC
Confidence 3578999999999999999999999999999998888877666666763 3221 1111 16899999998
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
....+. ..++.++++|.++..|..+
T Consensus 243 ~~~~~~-~~~~~l~~~g~~i~~g~~~ 267 (345)
T cd08260 243 IPETCR-NSVASLRKRGRHVQVGLTL 267 (345)
T ss_pred CHHHHH-HHHHHhhcCCEEEEeCCcC
Confidence 655554 4788999999999998753
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.5e-06 Score=76.90 Aligned_cols=157 Identities=15% Similarity=0.168 Sum_probs=90.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh----hcCCcccCHHhhhcCCcEEEEccCChh----
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL----TEGIPVLTREDVVSEAGLFVTTTENAD---- 131 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~----~~G~~~~~~~~~~~~aDvvi~a~G~~~---- 131 (243)
+.+|+.|+|+|+| ++|+.+|.-+..+|++++++|+++.-..+-. +.| +.-..+.+++-..+
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g----------~~~~y~cdis~~eei~~~ 104 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG----------EAKAYTCDISDREEIYRL 104 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC----------ceeEEEecCCCHHHHHHH
Confidence 5799999999999 9999999999999999999999987543211 112 01123333332221
Q ss_pred --cccHHHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccC
Q 037949 132 --IIMVRHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGC 202 (243)
Q Consensus 132 --~i~~~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s 202 (243)
-+. +..+ ....+|+|+|+.. .+.+.+.+.. .+..|+....|--.. -++.| .+|-|||++|
T Consensus 105 a~~Vk-~e~G--~V~ILVNNAGI~~~~~ll~~~d~ei~k-------~~~vN~~~~f~t~ka-FLP~M~~~~~GHIV~IaS 173 (300)
T KOG1201|consen 105 AKKVK-KEVG--DVDILVNNAGIVTGKKLLDCSDEEIQK-------TFDVNTIAHFWTTKA-FLPKMLENNNGHIVTIAS 173 (300)
T ss_pred HHHHH-HhcC--CceEEEeccccccCCCccCCCHHHHHH-------HHHHhhHHHHHHHHH-HhHHHHhcCCceEEEehh
Confidence 122 2234 4467888888764 2244444433 123444333332222 33333 4699999999
Q ss_pred CCCCccccccchH--HHHH---------HHHhcC-CCCCccccCCHHH
Q 037949 203 PTGHPSFVMSCSF--TNQA---------AALHLG-KPGDKFRKLTPEQ 238 (243)
Q Consensus 203 ~~g~p~~~~~~~~--~~~~---------~~~~l~-~~~~~~~~~~~~~ 238 (243)
..|+-+-..-..| +-.+ +|+... +-|+|.|-..|-|
T Consensus 174 ~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~ 221 (300)
T KOG1201|consen 174 VAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYF 221 (300)
T ss_pred hhcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeee
Confidence 7655333332222 2222 555544 5558877666543
|
|
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.4e-05 Score=71.08 Aligned_cols=93 Identities=19% Similarity=0.178 Sum_probs=73.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh---hh--cCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED---VV--SEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~---~~--~~aDvvi~a~G~ 129 (243)
..++++++|.|.|.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+ .. ...|++++|+|.
T Consensus 163 ~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~ 242 (338)
T cd08254 163 VKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGT 242 (338)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCC
Confidence 3578999999999999999999999999999999998887766666653 211 111 11 368999999987
Q ss_pred hhcccHHHHccCCCCeEEEEecCCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
...+. +.++.++++|.++..|...
T Consensus 243 ~~~~~-~~~~~l~~~G~~v~~g~~~ 266 (338)
T cd08254 243 QPTFE-DAQKAVKPGGRIVVVGLGR 266 (338)
T ss_pred HHHHH-HHHHHhhcCCEEEEECCCC
Confidence 66665 5789999999999998654
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.21 E-value=7.8e-06 Score=72.29 Aligned_cols=94 Identities=16% Similarity=0.195 Sum_probs=64.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhh-cCC----cc-cCHHhhhcCCcEEEEccCCh--h
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALT-EGI----PV-LTREDVVSEAGLFVTTTENA--D 131 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~-~G~----~~-~~~~~~~~~aDvvi~a~G~~--~ 131 (243)
.+.+++|+|+|+|.+|++++..|+..| .+|+++++++.+...... .+. .. .+..+.+.++|+||+|+... +
T Consensus 120 ~~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivInaTp~g~~~ 199 (278)
T PRK00258 120 DLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDLELQEELADFDLIINATSAGMSG 199 (278)
T ss_pred CCCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecccchhccccCCEEEECCcCCCCC
Confidence 468899999999999999999999999 599999999887543332 111 11 12234567899999997432 1
Q ss_pred -c-ccHHHHccCCCCeEEEEecCCC
Q 037949 132 -I-IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 -~-i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
. ...-..+.++++..|+.+-..+
T Consensus 200 ~~~~~~~~~~~l~~~~~v~DivY~P 224 (278)
T PRK00258 200 ELPLPPLPLSLLRPGTIVYDMIYGP 224 (278)
T ss_pred CCCCCCCCHHHcCCCCEEEEeecCC
Confidence 0 1011234567788888776543
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.1e-05 Score=71.99 Aligned_cols=88 Identities=20% Similarity=0.217 Sum_probs=69.0
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcC---CcEEEEccCChh----cccHHH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSE---AGLFVTTTENAD----IIMVRH 137 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~---aDvvi~a~G~~~----~i~~~~ 137 (243)
++.|||.|.+|..+|..+...|.+|+++|+++.+.......|... .++++.+++ +|+|+.|+.... +++ ..
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~-~i 80 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIK-DL 80 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHH-HH
Confidence 589999999999999999999999999999998876666667653 356666654 699999987652 232 34
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
+..++++.++++++...
T Consensus 81 ~~~l~~g~ivid~st~~ 97 (299)
T PRK12490 81 YPLLSPGDIVVDGGNSR 97 (299)
T ss_pred hccCCCCCEEEECCCCC
Confidence 56678899999987654
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.4e-05 Score=71.72 Aligned_cols=99 Identities=19% Similarity=0.177 Sum_probs=73.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHhh-c---CCc--ccCHHhhhcCCcEEEEccCChh-c
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQALT-E---GIP--VLTREDVVSEAGLFVTTTENAD-I 132 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~~-~---G~~--~~~~~~~~~~aDvvi~a~G~~~-~ 132 (243)
...++++|+|+|.+|+..+..+.. ++. +|.++++++.+....+. . +.. +.+.++++.++|+|+.||.++. +
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~~Pl 202 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSRTPV 202 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCCCce
Confidence 356899999999999999999975 676 79999999887543322 1 333 2356778889999999987654 4
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
+.. .+++|..|+.+|... .|+|.+.+..
T Consensus 203 ~~~----~~~~g~hi~~iGs~~p~~~El~~~~~~~ 233 (304)
T PRK07340 203 YPE----AARAGRLVVAVGAFTPDMAELAPRTVRG 233 (304)
T ss_pred eCc----cCCCCCEEEecCCCCCCcccCCHHHHhh
Confidence 532 379999999999763 5677665543
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.6e-06 Score=75.51 Aligned_cols=40 Identities=25% Similarity=0.299 Sum_probs=36.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++||+++|+|++ .||+.+|+.|...|++|+++++++.++.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 46 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLK 46 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 679999999986 8999999999999999999999877653
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.19 E-value=8.1e-06 Score=72.54 Aligned_cols=88 Identities=20% Similarity=0.237 Sum_probs=60.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-----------hcCC-------------cccCHHhhhcCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-----------TEGI-------------PVLTREDVVSEA 120 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-----------~~G~-------------~~~~~~~~~~~a 120 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++.+++.+. ..|. .+.+..+.++++
T Consensus 5 ~~V~vIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a 84 (295)
T PLN02545 5 KKVGVVGAGQMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRDA 84 (295)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCCC
Confidence 6899999999999999999999999999999988764321 1221 112223457899
Q ss_pred cEEEEccCChhc----ccHHHHccCCCCeEEE-EecC
Q 037949 121 GLFVTTTENADI----IMVRHMKQMKNAAIVC-NIGH 152 (243)
Q Consensus 121 Dvvi~a~G~~~~----i~~~~l~~l~~g~~vv-nvg~ 152 (243)
|+||+|...... +-.+..+.++++++++ |++.
T Consensus 85 D~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~ 121 (295)
T PLN02545 85 DFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSS 121 (295)
T ss_pred CEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 999999753222 2122334568888876 5544
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=98.18 E-value=8.6e-06 Score=72.21 Aligned_cols=89 Identities=17% Similarity=0.132 Sum_probs=71.2
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH----hhh-----cCCcEEEEccCChh
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE----DVV-----SEAGLFVTTTENAD 131 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~----~~~-----~~aDvvi~a~G~~~ 131 (243)
.|++|+|.|+ |.+|..+++.++.+|++|++++.++.+...+...|++ +.+.. +.+ .++|++++|+|..
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~- 224 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGK- 224 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHH-
Confidence 4789999999 9999999999999999999999988888777777763 22211 111 3589999999874
Q ss_pred cccHHHHccCCCCeEEEEecCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+. +.++.++++|+++.+|..
T Consensus 225 ~~~-~~~~~l~~~G~~i~~g~~ 245 (326)
T cd08289 225 TLA-YLLSTLQYGGSVAVSGLT 245 (326)
T ss_pred HHH-HHHHHhhcCCEEEEEeec
Confidence 454 579999999999999865
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.9e-05 Score=71.38 Aligned_cols=98 Identities=18% Similarity=0.209 Sum_probs=72.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHH-hCCC-EEEEEeCCchhHHHHhh-----cCCc---ccCHHhhhcCCcEEEEccCChhc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALK-AVGA-RVMGTEIDLICALQALT-----EGIP---VLTREDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~-~~Ga-~V~v~d~~~~r~~~a~~-----~G~~---~~~~~~~~~~aDvvi~a~G~~~~ 132 (243)
..++++|+|+|.+|+..+..+. ..++ +|.++++++++.....+ .+.+ +.+.++++.++|+|+.||++.+.
T Consensus 126 ~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p 205 (325)
T PRK08618 126 DAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTP 205 (325)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCc
Confidence 4689999999999998887664 5677 79999999887643322 2443 23467778899999999987664
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
+- . +.+++|..|+.+|... .|+|...+.
T Consensus 206 ~i--~-~~l~~G~hV~~iGs~~p~~~E~~~~~~~ 236 (325)
T PRK08618 206 VF--S-EKLKKGVHINAVGSFMPDMQELPSEAIA 236 (325)
T ss_pred ch--H-HhcCCCcEEEecCCCCcccccCCHHHHh
Confidence 42 3 6779999999999863 456654443
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.17 E-value=6.6e-06 Score=76.28 Aligned_cols=94 Identities=19% Similarity=0.268 Sum_probs=72.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHH-HHhhcCCcccCHHh---hhcCCcEEEEccCChh-ccc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICAL-QALTEGIPVLTRED---VVSEAGLFVTTTENAD-IIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~-~a~~~G~~~~~~~~---~~~~aDvvi~a~G~~~-~i~ 134 (243)
.+++++|+|+|+|-+|..+|+.|...|. +|++..++.+|.. .|.+.|..++++++ .+..+|+||.+||.++ ++.
T Consensus 175 ~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~~ii~ 254 (414)
T COG0373 175 SLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPHPIIT 254 (414)
T ss_pred ccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCccccC
Confidence 3789999999999999999999999996 8999999988753 35567877666544 5679999999998864 455
Q ss_pred HHHHccC---CCCeEEEEecCCC
Q 037949 135 VRHMKQM---KNAAIVCNIGHFD 154 (243)
Q Consensus 135 ~~~l~~l---~~g~~vvnvg~~~ 154 (243)
.+.+... +++-+++..+.+.
T Consensus 255 ~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 255 REMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred HHHHHHHHhcccCeEEEEecCCC
Confidence 5554433 2224677877763
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.16 E-value=9.8e-06 Score=77.62 Aligned_cols=93 Identities=13% Similarity=0.127 Sum_probs=69.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-c-CCc--cc---CHHhhhcCCcEEEEccCCh-hc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-E-GIP--VL---TREDVVSEAGLFVTTTENA-DI 132 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~-G~~--~~---~~~~~~~~aDvvi~a~G~~-~~ 132 (243)
+.+++|+|+|+|.+|..+++.|...|+ +|+++++++.+...... . +.. +. +..+.+.++|+||.||+.+ ++
T Consensus 264 l~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~pv 343 (519)
T PLN00203 264 HASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSETPL 343 (519)
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence 568999999999999999999999998 79999999887644332 2 322 22 2345678999999999765 45
Q ss_pred ccHHHHccCCC-------CeEEEEecCCC
Q 037949 133 IMVRHMKQMKN-------AAIVCNIGHFD 154 (243)
Q Consensus 133 i~~~~l~~l~~-------g~~vvnvg~~~ 154 (243)
+..+.++.+.+ .-++++.+.+.
T Consensus 344 I~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 344 FLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred eCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 77777776632 13788888763
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=9.8e-06 Score=69.29 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=36.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
++|++++|+|++ +||+.+++.+...|++|+++++++.++..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~ 44 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKD 44 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 578999999998 89999999999999999999998876543
|
|
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.2e-05 Score=71.91 Aligned_cols=102 Identities=17% Similarity=0.183 Sum_probs=76.8
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCccc-----CHHh----hh--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVL-----TRED----VV-- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~-----~~~~----~~-- 117 (243)
.|+++... . ..+|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+..+ +..+ ..
T Consensus 156 a~~~~~~~-~-~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 233 (344)
T cd08284 156 GYFGAKRA-Q-VRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEPINFEDAEPVERVREATEG 233 (344)
T ss_pred HHhhhHhc-C-CccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCeEEecCCcCHHHHHHHHhCC
Confidence 35555432 2 4579999999999999999999999997 89888888877766666774321 1111 12
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|++++++|....+. ..+..++++++++.+|..+
T Consensus 234 ~~~dvvid~~~~~~~~~-~~~~~l~~~g~~v~~g~~~ 269 (344)
T cd08284 234 RGADVVLEAVGGAAALD-LAFDLVRPGGVISSVGVHT 269 (344)
T ss_pred CCCCEEEECCCCHHHHH-HHHHhcccCCEEEEECcCC
Confidence 36899999998766664 5789999999999998764
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.3e-05 Score=71.28 Aligned_cols=86 Identities=14% Similarity=0.185 Sum_probs=60.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH-----------hhcCCc--------------ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA-----------LTEGIP--------------VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a-----------~~~G~~--------------~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|++++.++.+ ...|.- +.+. +.+++
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~~ 84 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFAD 84 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhCC
Confidence 589999999999999999999999999999999876552 222321 1123 34679
Q ss_pred CcEEEEccCChhcccHH---HHccC--CCCeEEEEec
Q 037949 120 AGLFVTTTENADIIMVR---HMKQM--KNAAIVCNIG 151 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~---~l~~l--~~g~~vvnvg 151 (243)
+|+|++|.....-+..+ .++.+ ++++++++..
T Consensus 85 ~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snT 121 (286)
T PRK07819 85 RQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNT 121 (286)
T ss_pred CCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 99999997543222221 34555 6788887543
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.15 E-value=7.5e-06 Score=67.93 Aligned_cols=94 Identities=19% Similarity=0.232 Sum_probs=57.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-c-------------ccCHHhhhcCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-P-------------VLTREDVVSEA 120 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~-------------~~~~~~~~~~a 120 (243)
+|.|+|+|.+|..+|..+...|.+|+++|++++.+..+.. .|. . ..+++++. ++
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~a 79 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-DA 79 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-TE
T ss_pred CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-hh
Confidence 6899999999999999999999999999999987644331 111 0 01233334 89
Q ss_pred cEEEEccCCh-----hcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 121 GLFVTTTENA-----DIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 121 Dvvi~a~G~~-----~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
|+|+||..-. .++ .+.-+.+++++++..-.. .++...+..
T Consensus 80 dlViEai~E~l~~K~~~~-~~l~~~~~~~~ilasnTS---sl~i~~la~ 124 (180)
T PF02737_consen 80 DLVIEAIPEDLELKQELF-AELDEICPPDTILASNTS---SLSISELAA 124 (180)
T ss_dssp SEEEE-S-SSHHHHHHHH-HHHHCCS-TTSEEEE--S---SS-HHHHHT
T ss_pred heehhhccccHHHHHHHH-HHHHHHhCCCceEEecCC---CCCHHHHHh
Confidence 9999996431 233 222345578888875333 245555543
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.1e-05 Score=66.65 Aligned_cols=92 Identities=18% Similarity=0.105 Sum_probs=71.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~ 127 (243)
..+|++++|.|.|.+|..+++.++..|++ |+++..++.+...+...|++ +.+ ..+. . .+.|++++|.
T Consensus 127 ~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~ 206 (312)
T cd08269 127 IRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAV 206 (312)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 35799999999999999999999999998 99888887776666666653 221 1111 1 3589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|....+. ..++.++++|+++++|..
T Consensus 207 g~~~~~~-~~~~~l~~~g~~~~~g~~ 231 (312)
T cd08269 207 GHQWPLD-LAGELVAERGRLVIFGYH 231 (312)
T ss_pred CCHHHHH-HHHHHhccCCEEEEEccC
Confidence 8766565 478999999999999865
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.14 E-value=7.5e-07 Score=78.15 Aligned_cols=42 Identities=19% Similarity=0.115 Sum_probs=38.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQA 103 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a 103 (243)
..+++++|+|+- +||..+|+.|...|.+|+++.++.+++...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~l 46 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEAL 46 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH
Confidence 578999999987 999999999999999999999999987543
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.4e-05 Score=69.22 Aligned_cols=38 Identities=32% Similarity=0.497 Sum_probs=34.2
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++||+++|+|++ +||+++|+.+...|++|+++++++.
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~ 47 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK 47 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh
Confidence 4689999999986 7999999999999999999988754
|
|
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.7e-05 Score=72.25 Aligned_cols=91 Identities=18% Similarity=0.180 Sum_probs=73.2
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----cCCcEEEEccCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDVV-----SEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~-----~~aDvvi~a~G~ 129 (243)
.+|++|+|.|.|.+|+.+++.++++|+ .|++++.++.+...+...|++ +++ ..+.+ .++|++++|+|.
T Consensus 185 ~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~ 264 (365)
T cd08278 185 RPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGV 264 (365)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCC
Confidence 579999999999999999999999999 588899999887776667764 222 21211 368999999987
Q ss_pred hhcccHHHHccCCCCeEEEEecCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
...+. ..++.++++|+++.+|..
T Consensus 265 ~~~~~-~~~~~l~~~G~~v~~g~~ 287 (365)
T cd08278 265 PAVIE-QAVDALAPRGTLALVGAP 287 (365)
T ss_pred cHHHH-HHHHHhccCCEEEEeCcC
Confidence 66665 579999999999999865
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.4e-05 Score=72.81 Aligned_cols=92 Identities=17% Similarity=0.223 Sum_probs=72.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|.|.|++|+.+++.++.+|++ |++++.++.+...+...|++ +++. .+.+ .+.|+++++
T Consensus 181 ~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~ 260 (365)
T cd05279 181 VTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEV 260 (365)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEEC
Confidence 35799999999999999999999999995 77888888887777777763 2221 1111 358999999
Q ss_pred cCChhcccHHHHccCC-CCeEEEEecCC
Q 037949 127 TENADIIMVRHMKQMK-NAAIVCNIGHF 153 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~-~g~~vvnvg~~ 153 (243)
+|....+. ..++.++ ++|+++.+|..
T Consensus 261 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 287 (365)
T cd05279 261 IGSADTLK-QALDATRLGGGTSVVVGVP 287 (365)
T ss_pred CCCHHHHH-HHHHHhccCCCEEEEEecC
Confidence 98766665 4788898 99999998864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.6e-05 Score=70.64 Aligned_cols=86 Identities=17% Similarity=0.252 Sum_probs=60.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-------------cc-cCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-------------PV-LTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-------------~~-~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++++++.+.. .|. .. .+. +.+.+
T Consensus 5 ~kI~vIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 83 (292)
T PRK07530 5 KKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDL-EDLAD 83 (292)
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCH-HHhcC
Confidence 68999999999999999999999999999999887654321 131 11 123 34678
Q ss_pred CcEEEEccCChhcc----cHHHHccCCCCeEEE-Eec
Q 037949 120 AGLFVTTTENADII----MVRHMKQMKNAAIVC-NIG 151 (243)
Q Consensus 120 aDvvi~a~G~~~~i----~~~~l~~l~~g~~vv-nvg 151 (243)
+|+|++|+..+..+ -.+..+.++++.+++ |++
T Consensus 84 aD~Vieavpe~~~~k~~~~~~l~~~~~~~~ii~s~ts 120 (292)
T PRK07530 84 CDLVIEAATEDETVKRKIFAQLCPVLKPEAILATNTS 120 (292)
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCC
Confidence 99999998653211 123345568888887 443
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.12 E-value=2e-05 Score=70.42 Aligned_cols=88 Identities=18% Similarity=0.140 Sum_probs=68.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-CHHhhhcC---CcEEEEccCChh----cccHHH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-TREDVVSE---AGLFVTTTENAD----IIMVRH 137 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~~~~~~~---aDvvi~a~G~~~----~i~~~~ 137 (243)
+|.|+|.|.+|..+|+.+...|.+|+++|+++.+.......|..+. ++.+..+. +|+|+.|..... ++. ..
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~-~l 80 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATID-EL 80 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHHH-HH
Confidence 6999999999999999999999999999999988766666777543 56666554 699998876542 232 34
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
...++++.++++.+...
T Consensus 81 ~~~l~~g~ivid~st~~ 97 (301)
T PRK09599 81 APLLSPGDIVIDGGNSY 97 (301)
T ss_pred HhhCCCCCEEEeCCCCC
Confidence 56678899999987654
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.9e-05 Score=70.39 Aligned_cols=89 Identities=18% Similarity=0.109 Sum_probs=69.8
Q ss_pred cCcEEEEE--cCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEccC
Q 037949 63 AGKIAVDC--GHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTTE 128 (243)
Q Consensus 63 ~g~~vlVi--G~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~G 128 (243)
.+.+++|+ |.|++|+.+++.++.+|++|++++.++.+++.+...|++ +++ ..+ .. .+.|++++++|
T Consensus 142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g 221 (324)
T cd08291 142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVG 221 (324)
T ss_pred CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCC
Confidence 56667775 789999999999999999999999999888888778874 222 211 11 26899999999
Q ss_pred ChhcccHHHHccCCCCeEEEEecCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
..... +.+..++++|+++.+|..
T Consensus 222 ~~~~~--~~~~~l~~~G~~v~~g~~ 244 (324)
T cd08291 222 GGLTG--QILLAMPYGSTLYVYGYL 244 (324)
T ss_pred cHHHH--HHHHhhCCCCEEEEEEec
Confidence 86643 468889999999999864
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.9e-05 Score=70.35 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=75.6
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH------hhhcCCcEE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE------DVVSEAGLF 123 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~------~~~~~aDvv 123 (243)
|+++.+. . ..+|++++|+|+|.+|+.+++.++..|++|++++.++.+.......|.+ +++.. ....+.|++
T Consensus 152 ~~~l~~~-~-~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v 229 (330)
T cd08245 152 YSALRDA-G-PRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVI 229 (330)
T ss_pred HHHHHhh-C-CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEE
Confidence 4555432 2 3578999999999999999999999999999999988877666666653 22210 112368999
Q ss_pred EEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 124 i~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+++.+....+. +.++.++++|.++++|..
T Consensus 230 i~~~~~~~~~~-~~~~~l~~~G~~i~~~~~ 258 (330)
T cd08245 230 LVTVVSGAAAE-AALGGLRRGGRIVLVGLP 258 (330)
T ss_pred EECCCcHHHHH-HHHHhcccCCEEEEECCC
Confidence 99987766664 579999999999998864
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.8e-05 Score=68.74 Aligned_cols=93 Identities=18% Similarity=0.268 Sum_probs=71.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH--H----h------hh--cCCcEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR--E----D------VV--SEAGLFV 124 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~--~----~------~~--~~aDvvi 124 (243)
..+|++|+|.|.|.+|..+++.++..|++ |++++.++.+...+...|.+ +++. . + .. .+.|+++
T Consensus 159 ~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vi 238 (341)
T cd08262 159 LTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIF 238 (341)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEE
Confidence 45799999999999999999999999996 67778888877666666753 2221 0 1 11 3589999
Q ss_pred EccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 125 TTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 125 ~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+++|....+. +.+..++++|+++++|...
T Consensus 239 d~~g~~~~~~-~~~~~l~~~g~~v~~g~~~ 267 (341)
T cd08262 239 ECVGAPGLIQ-QIIEGAPPGGRIVVVGVCM 267 (341)
T ss_pred ECCCCHHHHH-HHHHHhccCCEEEEECCCC
Confidence 9998754454 4688899999999998653
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.9e-05 Score=64.77 Aligned_cols=93 Identities=24% Similarity=0.257 Sum_probs=62.8
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----cCCc-----ccCH---HhhhcCCcEEEEc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALT-----EGIP-----VLTR---EDVVSEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----~G~~-----~~~~---~~~~~~aDvvi~a 126 (243)
.+++++++|+|+ |++|+.++..+...|++|+++++++.++..... .+.. ..+. .+.+.++|+|+.+
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 568999999996 999999999999999999999998876533222 1221 1122 3456789999998
Q ss_pred cCChhcccHHHHc-cCCCCeEEEEecCCC
Q 037949 127 TENADIIMVRHMK-QMKNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~i~~~~l~-~l~~g~~vvnvg~~~ 154 (243)
+....... .... ..+++.+++++...+
T Consensus 105 t~~g~~~~-~~~~~~~~~~~vv~D~~~~~ 132 (194)
T cd01078 105 GAAGVELL-EKLAWAPKPLAVAADVNAVP 132 (194)
T ss_pred CCCCceec-hhhhcccCceeEEEEccCCC
Confidence 75543211 1122 234566777776654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.8e-05 Score=70.42 Aligned_cols=100 Identities=14% Similarity=0.024 Sum_probs=75.8
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHh-hhcCCcEEEEccC
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRED-VVSEAGLFVTTTE 128 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~-~~~~aDvvi~a~G 128 (243)
|+++..+ . ..+|.+++|.|.|++|+.+++.++..|++|++++.++.+...+...|++ +.+..+ .-++.|+++++++
T Consensus 157 ~~~~~~~-~-~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~vD~vi~~~~ 234 (329)
T cd08298 157 YRALKLA-G-LKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDLPPEPLDAAIIFAP 234 (329)
T ss_pred HHHHHhh-C-CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCccCCCcccEEEEcCC
Confidence 4555322 2 4579999999999999999999999999999998888877777667764 222221 1246899999877
Q ss_pred ChhcccHHHHccCCCCeEEEEecCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
....+. +.++.++++|+++.+|..
T Consensus 235 ~~~~~~-~~~~~l~~~G~~v~~g~~ 258 (329)
T cd08298 235 VGALVP-AALRAVKKGGRVVLAGIH 258 (329)
T ss_pred cHHHHH-HHHHHhhcCCEEEEEcCC
Confidence 666664 579999999999998854
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=98.09 E-value=2e-05 Score=58.03 Aligned_cols=85 Identities=18% Similarity=0.245 Sum_probs=60.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCC---CEEEEE-eCCchhHHHHh-hcCCccc--CHHhhhcCCcEEEEccCChhc--ccHH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG---ARVMGT-EIDLICALQAL-TEGIPVL--TREDVVSEAGLFVTTTENADI--IMVR 136 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G---a~V~v~-d~~~~r~~~a~-~~G~~~~--~~~~~~~~aDvvi~a~G~~~~--i~~~ 136 (243)
+++|+|+|.+|..+++.+...| .+|+++ ++++++..... ..+..+. +..++++.+|+|+.|+..... +-.
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~~~~v~~- 79 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQLPEVLS- 79 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGGHHHHHH-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHHHHHHHH-
Confidence 5889999999999999999999 799854 99999875543 4455433 577888899999999744322 111
Q ss_pred HHccCCCCeEEEEec
Q 037949 137 HMKQMKNAAIVCNIG 151 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg 151 (243)
.+....++..++++.
T Consensus 80 ~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 80 EIPHLLKGKLVISIA 94 (96)
T ss_dssp HHHHHHTTSEEEEES
T ss_pred HHhhccCCCEEEEeC
Confidence 233345677777653
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.2e-05 Score=72.20 Aligned_cols=92 Identities=11% Similarity=0.134 Sum_probs=67.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-hcC-CcccCH---HhhhcCCcEEEEccCChhc-c
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-TEG-IPVLTR---EDVVSEAGLFVTTTENADI-I 133 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~~G-~~~~~~---~~~~~~aDvvi~a~G~~~~-i 133 (243)
.+.|++++|+|+|.+|..++..|...|+ +++++.+++.+..... ..+ ..+.++ .+.+..+|+||.||+.++. +
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~~vi 257 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLEYIV 257 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCCeeE
Confidence 3689999999999999999999999997 7999999987753322 233 333333 4557789999999998764 5
Q ss_pred cHHHHccCCCCeEEEEecCCC
Q 037949 134 MVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.+... .+.-+++..+.+.
T Consensus 258 ~~~~~~--~~~~~~iDLavPR 276 (414)
T PRK13940 258 TCKYVG--DKPRVFIDISIPQ 276 (414)
T ss_pred CHHHhC--CCCeEEEEeCCCC
Confidence 544433 2335677888763
|
|
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.1e-05 Score=70.74 Aligned_cols=93 Identities=22% Similarity=0.219 Sum_probs=71.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH--------Hh----hh--cCCcEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR--------ED----VV--SEAGLFV 124 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~--------~~----~~--~~aDvvi 124 (243)
..+|++++|.|.|.+|..+++.++.+|++ |++++.++.+...+...|.+ +++. .+ .. .+.|+++
T Consensus 160 ~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vl 239 (343)
T cd05285 160 VRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVI 239 (343)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEE
Confidence 46899999999999999999999999997 88888888776666656653 2211 11 12 2489999
Q ss_pred EccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 125 TTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 125 ~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+|.|....+. ..++.++++|+++.+|..+
T Consensus 240 d~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 268 (343)
T cd05285 240 ECTGAESCIQ-TAIYATRPGGTVVLVGMGK 268 (343)
T ss_pred ECCCCHHHHH-HHHHHhhcCCEEEEEccCC
Confidence 9998765554 5789999999999988654
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.7e-05 Score=68.30 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=75.9
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-cc-CHHhhh-cCCcEEEEc
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VL-TREDVV-SEAGLFVTT 126 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~-~~~~~~-~~aDvvi~a 126 (243)
++++.+.. ..+|++++|.|+ |.+|..+++.++.+|++|+.++.++.+...+...|+. .+ ...+.. .+.|+++++
T Consensus 122 ~~~~~~~~--~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vl~~ 199 (305)
T cd08270 122 LRALRRGG--PLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSELSGAPVDLVVDS 199 (305)
T ss_pred HHHHHHhC--CCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccccccCCCceEEEEC
Confidence 45554433 236999999999 7999999999999999999998888887777777763 21 112211 368999999
Q ss_pred cCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 127 TENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+|... +. +.++.++.+|+++.+|...
T Consensus 200 ~g~~~-~~-~~~~~l~~~G~~v~~g~~~ 225 (305)
T cd08270 200 VGGPQ-LA-RALELLAPGGTVVSVGSSS 225 (305)
T ss_pred CCcHH-HH-HHHHHhcCCCEEEEEeccC
Confidence 98764 44 5799999999999998653
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.07 E-value=4e-05 Score=68.84 Aligned_cols=92 Identities=20% Similarity=0.224 Sum_probs=72.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEccC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~G 128 (243)
.+|++++|.|.|.+|..+++.++.+|++ |++++.++.+...+...|.+ +++ ..+ .. ++.|++++|.|
T Consensus 160 ~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g 239 (340)
T TIGR00692 160 ISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSG 239 (340)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCC
Confidence 5799999999999999999999999996 88888888877666667763 222 211 11 36899999988
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
....+. +.++.++++++++.+|...
T Consensus 240 ~~~~~~-~~~~~l~~~g~~v~~g~~~ 264 (340)
T TIGR00692 240 APKALE-QGLQAVTPGGRVSLLGLPP 264 (340)
T ss_pred CHHHHH-HHHHhhcCCCEEEEEccCC
Confidence 766664 5788999999999998653
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.3e-05 Score=67.89 Aligned_cols=89 Identities=21% Similarity=0.296 Sum_probs=60.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcC-CcccC---HHhhhcCCcEEEEccCChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEG-IPVLT---REDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G-~~~~~---~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
.+.|++|+|+|+|.+|..-++.|...|++|+|++++... +......| +.... ..+.+.++|+|+.|++.+. ++.
T Consensus 6 ~l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~~-ln~ 84 (205)
T TIGR01470 6 NLEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDEE-LNR 84 (205)
T ss_pred EcCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCHH-HHH
Confidence 468999999999999999999999999999999776542 21222233 22211 1334678999999998865 333
Q ss_pred HHHccCCCCeEEEEe
Q 037949 136 RHMKQMKNAAIVCNI 150 (243)
Q Consensus 136 ~~l~~l~~g~~vvnv 150 (243)
......+..++.+|+
T Consensus 85 ~i~~~a~~~~ilvn~ 99 (205)
T TIGR01470 85 RVAHAARARGVPVNV 99 (205)
T ss_pred HHHHHHHHcCCEEEE
Confidence 444444455555553
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.8e-05 Score=69.02 Aligned_cols=87 Identities=17% Similarity=0.221 Sum_probs=59.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh--------------cCC-------------cccCHHhhh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT--------------EGI-------------PVLTREDVV 117 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~--------------~G~-------------~~~~~~~~~ 117 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++.+++.+.. .|. ...+..+.+
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 83 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRTSTSYESL 83 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEeeCCHHHh
Confidence 68999999999999999999999999999999987654321 111 011111456
Q ss_pred cCCcEEEEccCChhcccHHH---H-ccCCCCeEEEEec
Q 037949 118 SEAGLFVTTTENADIIMVRH---M-KQMKNAAIVCNIG 151 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~---l-~~l~~g~~vvnvg 151 (243)
+++|+|++|+.....+..+. + ..++++.++++..
T Consensus 84 ~~aDlVieav~e~~~~k~~~~~~l~~~~~~~~il~S~t 121 (291)
T PRK06035 84 SDADFIVEAVPEKLDLKRKVFAELERNVSPETIIASNT 121 (291)
T ss_pred CCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEEcC
Confidence 78999999986543211222 2 3457778777543
|
|
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.8e-05 Score=68.97 Aligned_cols=92 Identities=22% Similarity=0.259 Sum_probs=71.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHh---hh--cCCcEEEEccCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----RED---VV--SEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~---~~--~~aDvvi~a~G~ 129 (243)
.+|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|.+ +++ ... .. .+.|++++|+|.
T Consensus 162 ~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~ 241 (341)
T cd05281 162 VSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGN 241 (341)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCEEEECCCC
Confidence 479999999999999999999999999 788888788777666667763 222 111 11 368999999987
Q ss_pred hhcccHHHHccCCCCeEEEEecCCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
...+. +.++.++++|+++..|..+
T Consensus 242 ~~~~~-~~~~~l~~~G~~v~~g~~~ 265 (341)
T cd05281 242 PKAIE-QGLKALTPGGRVSILGLPP 265 (341)
T ss_pred HHHHH-HHHHHhccCCEEEEEccCC
Confidence 76664 4788999999999988654
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.5e-05 Score=70.71 Aligned_cols=85 Identities=14% Similarity=0.168 Sum_probs=67.1
Q ss_pred EEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhccc------HHHHccC
Q 037949 69 DCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIM------VRHMKQM 141 (243)
Q Consensus 69 ViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~------~~~l~~l 141 (243)
|||.|.+|..+|+.+...|.+|+++|+++.+.......|... .++.++++++|+|+.|...+..+. ......+
T Consensus 1 ~IGlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~~ 80 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPKV 80 (288)
T ss_pred CCcccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhcC
Confidence 589999999999999999999999999998876666677653 467778889999999987643322 1234567
Q ss_pred CCCeEEEEecCC
Q 037949 142 KNAAIVCNIGHF 153 (243)
Q Consensus 142 ~~g~~vvnvg~~ 153 (243)
+++.++++.+..
T Consensus 81 ~~g~~vid~st~ 92 (288)
T TIGR01692 81 AKGSLLIDCSTI 92 (288)
T ss_pred CCCCEEEECCCC
Confidence 888999998744
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type | Back alignment and domain information |
|---|
Probab=98.06 E-value=3.5e-05 Score=69.70 Aligned_cols=98 Identities=16% Similarity=0.105 Sum_probs=70.7
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh----hcCCc---ccCHHhhhcCCcEEEEccCCh-hc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL----TEGIP---VLTREDVVSEAGLFVTTTENA-DI 132 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~----~~G~~---~~~~~~~~~~aDvvi~a~G~~-~~ 132 (243)
.-++++|+|+|.+|+..++.+.. ... +|.++|+++++..... +.|.. +.+.+++++++|+|+.||.+. +.
T Consensus 127 ~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P~ 206 (325)
T TIGR02371 127 DSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKPV 206 (325)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCcE
Confidence 35899999999999987766654 333 7999999998864322 23532 345788889999999998664 44
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
+.. +.+++|..|+++|... .|+|...+.
T Consensus 207 ~~~---~~l~~g~~v~~vGs~~p~~~Eld~~~l~ 237 (325)
T TIGR02371 207 VKA---DWVSEGTHINAIGADAPGKQELDPEILK 237 (325)
T ss_pred ecH---HHcCCCCEEEecCCCCcccccCCHHHHh
Confidence 543 4569999999999763 467765443
|
This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity. |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=98.06 E-value=4.8e-06 Score=62.78 Aligned_cols=86 Identities=20% Similarity=0.229 Sum_probs=56.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc--cCHHhhhcCCcEEEEccCChhcccHHHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV--LTREDVVSEAGLFVTTTENADIIMVRHM 138 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~--~~~~~~~~~aDvvi~a~G~~~~i~~~~l 138 (243)
.+.|++|+|+|+|++|..-++.|...|++|+++..+.... +..++. ...++.+.++|+|+.|++.+. ++.+..
T Consensus 4 ~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~~~~----~~~i~~~~~~~~~~l~~~~lV~~at~d~~-~n~~i~ 78 (103)
T PF13241_consen 4 DLKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEIEFS----EGLIQLIRREFEEDLDGADLVFAATDDPE-LNEAIY 78 (103)
T ss_dssp --TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSEHHH----HTSCEEEESS-GGGCTTESEEEE-SS-HH-HHHHHH
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhh----hhHHHHHhhhHHHHHhhheEEEecCCCHH-HHHHHH
Confidence 3689999999999999999999999999999997775111 111221 123455778999999988765 344444
Q ss_pred ccCCCCeEEEEec
Q 037949 139 KQMKNAAIVCNIG 151 (243)
Q Consensus 139 ~~l~~g~~vvnvg 151 (243)
...+.-++.+|+.
T Consensus 79 ~~a~~~~i~vn~~ 91 (103)
T PF13241_consen 79 ADARARGILVNVV 91 (103)
T ss_dssp HHHHHTTSEEEET
T ss_pred HHHhhCCEEEEEC
Confidence 5455455566543
|
|
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.8e-05 Score=69.47 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=75.0
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHh-CCCEEEEEeCCchhHHHHhhcCCc-ccCH------Hhh----hc
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKA-VGARVMGTEIDLICALQALTEGIP-VLTR------EDV----VS 118 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~-~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~------~~~----~~ 118 (243)
|+++... . ..+|++|+|.|.|++|..+++.++. .|++|++++.++++.+.+...|++ +++. .+. ..
T Consensus 152 ~~~~~~~-~-~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~ 229 (338)
T PRK09422 152 YKAIKVS-G-IKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG 229 (338)
T ss_pred HHHHHhc-C-CCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcC
Confidence 5665333 2 4689999999999999999999998 599999999999888777777764 2221 111 23
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.|+++.+++....+. +.++.++++|.++.+|...
T Consensus 230 ~~d~vi~~~~~~~~~~-~~~~~l~~~G~~v~~g~~~ 264 (338)
T PRK09422 230 GAHAAVVTAVAKAAFN-QAVDAVRAGGRVVAVGLPP 264 (338)
T ss_pred CCcEEEEeCCCHHHHH-HHHHhccCCCEEEEEeeCC
Confidence 5786666666666665 5799999999999998653
|
|
| >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.3e-05 Score=67.48 Aligned_cols=94 Identities=20% Similarity=0.293 Sum_probs=64.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEE-EEeC----------CchhHHHHhh-cC----C---cccCHHhhh-cCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVM-GTEI----------DLICALQALT-EG----I---PVLTREDVV-SEA 120 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~-v~d~----------~~~r~~~a~~-~G----~---~~~~~~~~~-~~a 120 (243)
.+.|++++|.|+|.||+.+++.|..+|++|+ ++|. |...+..... .| + ..++.++.+ .++
T Consensus 28 ~l~~~~v~I~G~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~~~~~i~~~~~ 107 (227)
T cd01076 28 GLAGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERITNEELLELDC 107 (227)
T ss_pred CccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceecCCccceeecc
Confidence 5789999999999999999999999999988 7887 6555443332 22 1 112223332 379
Q ss_pred cEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCC
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEID 158 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id 158 (243)
||+++|+ ....++.+....++ +.+|.-|.. .++.
T Consensus 108 Dvlip~a-~~~~i~~~~~~~l~--a~~I~egAN-~~~t 141 (227)
T cd01076 108 DILIPAA-LENQITADNADRIK--AKIIVEAAN-GPTT 141 (227)
T ss_pred cEEEecC-ccCccCHHHHhhce--eeEEEeCCC-CCCC
Confidence 9999997 44567777777774 666654433 3344
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.6e-05 Score=70.78 Aligned_cols=92 Identities=15% Similarity=0.124 Sum_probs=71.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCcc-c-------CHHhh---h-----cCCcEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIPV-L-------TREDV---V-----SEAGLF 123 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~~-~-------~~~~~---~-----~~aDvv 123 (243)
..+|++++|.|.|++|..+++.++.+|++ |++++.++.+...+...|++. . +..+. + ..+|++
T Consensus 179 ~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (364)
T PLN02702 179 IGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVS 258 (364)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEE
Confidence 35799999999999999999999999995 778888888877666677642 1 11111 1 258999
Q ss_pred EEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 124 i~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
++++|....+. +.++.++++|+++.+|..
T Consensus 259 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 287 (364)
T PLN02702 259 FDCVGFNKTMS-TALEATRAGGKVCLVGMG 287 (364)
T ss_pred EECCCCHHHHH-HHHHHHhcCCEEEEEccC
Confidence 99999766664 579999999999999864
|
|
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=98.05 E-value=4.4e-05 Score=68.75 Aligned_cols=97 Identities=20% Similarity=0.143 Sum_probs=69.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHhhc----CCc--c-cCHHhhhcCCcEEEEccCChh-c
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQALTE----GIP--V-LTREDVVSEAGLFVTTTENAD-I 132 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~~~----G~~--~-~~~~~~~~~aDvvi~a~G~~~-~ 132 (243)
..++++|+|+|.+|+.+++.+.. ++. +|.++++++++....... |.. + .+.++++.++|+|+.||+.+. +
T Consensus 124 ~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~~pv 203 (314)
T PRK06141 124 DASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLSTEPL 203 (314)
T ss_pred CCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCCCCE
Confidence 56899999999999999876654 564 899999998875443322 422 2 356777889999999987653 3
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDL 162 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l 162 (243)
+.. +.+++|..|+.+|... .+++...+
T Consensus 204 l~~---~~l~~g~~i~~ig~~~~~~~El~~~~~ 233 (314)
T PRK06141 204 VRG---EWLKPGTHLDLVGNFTPDMRECDDEAI 233 (314)
T ss_pred ecH---HHcCCCCEEEeeCCCCcccccCCHHHH
Confidence 543 4578999888888763 35665443
|
|
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.9e-05 Score=69.17 Aligned_cols=93 Identities=13% Similarity=0.201 Sum_probs=71.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++|+|.|.|.+|..+++.++++|++ |++++.++.+...+...|++ +++ ..+ .. .++|++++++
T Consensus 172 ~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~ 251 (350)
T cd08256 172 IKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEKIKELTGGYGCDIYIEAT 251 (350)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 35799999999999999999999999985 67788888887666667764 222 111 11 2589999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|....+. ..++.++++|+++++|...
T Consensus 252 g~~~~~~-~~~~~l~~~G~~v~~g~~~ 277 (350)
T cd08256 252 GHPSAVE-QGLNMIRKLGRFVEFSVFG 277 (350)
T ss_pred CChHHHH-HHHHHhhcCCEEEEEccCC
Confidence 8655554 4789999999999998654
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.8e-05 Score=73.07 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=71.3
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH------------------------
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE------------------------ 114 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~------------------------ 114 (243)
..+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.+...+...|.+ +++.+
T Consensus 187 ~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (398)
T TIGR01751 187 VKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFK 266 (398)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcch
Confidence 357899999998 8999999999999999988888888877777777753 22210
Q ss_pred ---h----hh--cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 115 ---D----VV--SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 115 ---~----~~--~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+ .. .++|++++|+|.. .+. ..++.++++|+++.+|...
T Consensus 267 ~~~~~~~~~~~~~g~d~vld~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 313 (398)
T TIGR01751 267 RFGKRIRELTGGEDPDIVFEHPGRA-TFP-TSVFVCRRGGMVVICGGTT 313 (398)
T ss_pred hHHHHHHHHcCCCCceEEEECCcHH-HHH-HHHHhhccCCEEEEEcccc
Confidence 0 11 3599999999864 454 4789999999999998653
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.7e-05 Score=68.78 Aligned_cols=90 Identities=22% Similarity=0.210 Sum_probs=70.8
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH----h---hh--cCCcEEEEccCChh
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE----D---VV--SEAGLFVTTTENAD 131 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~----~---~~--~~aDvvi~a~G~~~ 131 (243)
.+++|+|.|+ |.+|+.+++.++.+|++|++++.++++...+...|.+ +++.. + .. .++|++++++|..
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~- 224 (325)
T cd05280 146 EDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGD- 224 (325)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchH-
Confidence 3579999998 8999999999999999999999999887777777764 22211 1 11 3589999999875
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+. +.++.++++|+++..|..+
T Consensus 225 ~~~-~~~~~l~~~g~~v~~g~~~ 246 (325)
T cd05280 225 VLA-NLLKQTKYGGVVASCGNAA 246 (325)
T ss_pred HHH-HHHHhhcCCCEEEEEecCC
Confidence 344 5799999999999998653
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.1e-05 Score=75.31 Aligned_cols=88 Identities=17% Similarity=0.181 Sum_probs=62.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH-----------hhcCC-------------c-ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA-----------LTEGI-------------P-VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a-----------~~~G~-------------~-~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|++++.++.+ ...|. . +.+.+ .+.+
T Consensus 8 ~~V~VIGaG~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~-~~~~ 86 (507)
T PRK08268 8 ATVAVIGAGAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA-DLAD 86 (507)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH-HhCC
Confidence 789999999999999999999999999999999987553 23341 1 12233 3568
Q ss_pred CcEEEEccCChhcccHHH---Hcc-CCCCeEEE-EecCC
Q 037949 120 AGLFVTTTENADIIMVRH---MKQ-MKNAAIVC-NIGHF 153 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~---l~~-l~~g~~vv-nvg~~ 153 (243)
+|+||+|......+.... ++. +++++++. |.+..
T Consensus 87 aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl 125 (507)
T PRK08268 87 CDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSL 125 (507)
T ss_pred CCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 999999976543332222 333 47788885 66553
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.6e-05 Score=76.91 Aligned_cols=93 Identities=12% Similarity=0.145 Sum_probs=69.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhc-CCcEEEEccCCh---hcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVS-EAGLFVTTTENA---DIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~-~aDvvi~a~G~~---~~i~~ 135 (243)
...+++|+|||+|.||..+|+.++..|.+|+++|+++.. ..+...|+.. .+.++++. .+|+|+.|+... .++..
T Consensus 366 ~~~~~kIgIIGlG~mG~slA~~L~~~G~~V~~~dr~~~~-~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~vi~~ 444 (667)
T PLN02712 366 DGSKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRSDYS-DEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEKVLKS 444 (667)
T ss_pred CCCCCEEEEEecCHHHHHHHHHHHHCcCEEEEEECChHH-HHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHHHHHH
Confidence 357789999999999999999999999999999998653 3455667643 34566554 589999997643 33432
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
-....+++++++++++...
T Consensus 445 l~~~~lk~g~ivvDv~SvK 463 (667)
T PLN02712 445 LPFQRLKRSTLFVDVLSVK 463 (667)
T ss_pred HHHhcCCCCcEEEECCCcc
Confidence 1123578899999998875
|
|
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.5e-05 Score=70.45 Aligned_cols=101 Identities=17% Similarity=0.086 Sum_probs=75.3
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcccC-----HHhhh-----c
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVLT-----REDVV-----S 118 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~~-----~~~~~-----~ 118 (243)
.|+++..+ . ..+|++|+|.|.|.+|+.+++.++.+|+ +|+++|.++.+...+...|+..++ ..+.+ .
T Consensus 165 a~~a~~~~-~-~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~ 242 (375)
T cd08282 165 GWHGLELA-G-VQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDFSDGDPVEQILGLEPG 242 (375)
T ss_pred HHHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCeEeccCcccHHHHHHHhhCC
Confidence 35665332 2 3579999999999999999999999998 799999998888777777753221 11111 2
Q ss_pred CCcEEEEccCChh-----------cccHHHHccCCCCeEEEEecCC
Q 037949 119 EAGLFVTTTENAD-----------IIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 119 ~aDvvi~a~G~~~-----------~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+.|++++|+|... .++ +.++.++++|+++.+|..
T Consensus 243 ~~d~v~d~~g~~~~~~~~~~~~~~~~~-~~~~~l~~~g~~~~~g~~ 287 (375)
T cd08282 243 GVDRAVDCVGYEARDRGGEAQPNLVLN-QLIRVTRPGGGIGIVGVY 287 (375)
T ss_pred CCCEEEECCCCcccccccccchHHHHH-HHHHHhhcCcEEEEEecc
Confidence 5899999988653 254 468889999999888764
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.9e-05 Score=69.79 Aligned_cols=91 Identities=18% Similarity=0.191 Sum_probs=69.6
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh-hcC-CcccCHHhhhcCCcEEEEccCChhc--c
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL-TEG-IPVLTREDVVSEAGLFVTTTENADI--I 133 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~-~~G-~~~~~~~~~~~~aDvvi~a~G~~~~--i 133 (243)
.+.+++|+|+|+ |.||..+++.+.. .|+ +++++++++.++.... +.+ .++.++++.+.++|+|+.+++.++. +
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~~~~~~I 231 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASMPKGVEI 231 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcCCcCCcC
Confidence 478999999999 7999999999975 575 8999999877764422 222 2344567778899999999887543 5
Q ss_pred cHHHHccCCCCeEEEEecCCC
Q 037949 134 MVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.+ .++++.+++.+++..
T Consensus 232 ~~~---~l~~~~~viDiAvPR 249 (340)
T PRK14982 232 DPE---TLKKPCLMIDGGYPK 249 (340)
T ss_pred CHH---HhCCCeEEEEecCCC
Confidence 544 457899999999874
|
|
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.7e-05 Score=69.86 Aligned_cols=90 Identities=14% Similarity=0.163 Sum_probs=68.6
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-C-----HHh--hh--cCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-T-----RED--VV--SEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~-----~~~--~~--~~aDvvi~a~G~ 129 (243)
..+|++|+|.|+ |++|+.+++.++.+|++|++++.++ +...+...|++.+ + ..+ .. .++|++++++|.
T Consensus 175 ~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 253 (350)
T cd08274 175 VGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAKALGGEPVDVVADVVGG 253 (350)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCH
Confidence 357999999998 8999999999999999988877655 5556666676321 1 111 11 369999999987
Q ss_pred hhcccHHHHccCCCCeEEEEecCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
. .++ ..++.++++|+++++|..
T Consensus 254 ~-~~~-~~~~~l~~~G~~v~~g~~ 275 (350)
T cd08274 254 P-LFP-DLLRLLRPGGRYVTAGAI 275 (350)
T ss_pred H-HHH-HHHHHhccCCEEEEeccc
Confidence 5 343 579999999999998854
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.6e-05 Score=67.27 Aligned_cols=36 Identities=31% Similarity=0.580 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++||+++|+|++ .||+.+|+.|...|++|+++++++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~ 42 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE 42 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch
Confidence 579999999987 999999999999999999987754
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.02 E-value=3.2e-05 Score=68.52 Aligned_cols=84 Identities=19% Similarity=0.135 Sum_probs=59.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-------------------------CCc-ccCHHhhhc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-------------------------GIP-VLTREDVVS 118 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-------------------------G~~-~~~~~~~~~ 118 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++..++.+... ... ..+.+++++
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~~ 83 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAVK 83 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHhc
Confidence 579999999999999999999999999999998765443211 111 224556678
Q ss_pred CCcEEEEccCCh-----hcccHHHHccCCCCeEEEE
Q 037949 119 EAGLFVTTTENA-----DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 119 ~aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vvn 149 (243)
++|+|++|.... .++. +.-..++++.+++.
T Consensus 84 ~aDlVieavpe~~~~k~~~~~-~l~~~~~~~~ii~s 118 (287)
T PRK08293 84 DADLVIEAVPEDPEIKGDFYE-ELAKVAPEKTIFAT 118 (287)
T ss_pred CCCEEEEeccCCHHHHHHHHH-HHHhhCCCCCEEEE
Confidence 999999997643 2222 23345577777754
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.2e-05 Score=69.57 Aligned_cols=36 Identities=36% Similarity=0.480 Sum_probs=33.1
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ +||+++|+.|...|++|+++++++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~ 43 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND 43 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch
Confidence 679999999985 899999999999999999998874
|
|
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.02 E-value=4.2e-05 Score=68.66 Aligned_cols=90 Identities=13% Similarity=0.156 Sum_probs=66.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhh-cCCcEEEEccCChh---cccHHH
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVV-SEAGLFVTTTENAD---IIMVRH 137 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~-~~aDvvi~a~G~~~---~i~~~~ 137 (243)
.+.+++|+|+|.||..++..++..|.+|+++|+++.. ..+...|+.. .+.++.+ .++|+|+.|+.... ++. +.
T Consensus 35 ~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~~-~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~~~vl~-~l 112 (304)
T PLN02256 35 RKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDYS-DIAAELGVSFFRDPDDFCEEHPDVVLLCTSILSTEAVLR-SL 112 (304)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccHH-HHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHHHHHHH-hh
Confidence 5678999999999999999999999999999998753 3455567643 3455554 46999999986532 232 22
Q ss_pred -HccCCCCeEEEEecCCC
Q 037949 138 -MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 -l~~l~~g~~vvnvg~~~ 154 (243)
...++++.+|++++...
T Consensus 113 ~~~~l~~~~iviDv~SvK 130 (304)
T PLN02256 113 PLQRLKRSTLFVDVLSVK 130 (304)
T ss_pred hhhccCCCCEEEecCCch
Confidence 34467899999988854
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.9e-05 Score=67.39 Aligned_cols=36 Identities=31% Similarity=0.326 Sum_probs=31.5
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ +||+.+|+.+...|++|++.++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~ 42 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPD 42 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence 578999999973 899999999999999998876543
|
|
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.3e-05 Score=69.74 Aligned_cols=93 Identities=18% Similarity=0.141 Sum_probs=71.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH-----H--hh--hcCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR-----E--DV--VSEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~-----~--~~--~~~aDvvi~a~G~ 129 (243)
..+|++++|.|+|.+|..+++.++..|++ |++++.++.+...+...|.+ +++. . .. -.++|++++++|.
T Consensus 157 ~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~ 236 (334)
T cd08234 157 IKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGV 236 (334)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCC
Confidence 35789999999999999999999999997 88888888877666556653 2211 1 11 1468999999887
Q ss_pred hhcccHHHHccCCCCeEEEEecCCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
...+. ..++.++++|+++.+|..+
T Consensus 237 ~~~~~-~~~~~l~~~G~~v~~g~~~ 260 (334)
T cd08234 237 PKTLE-QAIEYARRGGTVLVFGVYA 260 (334)
T ss_pred hHHHH-HHHHHHhcCCEEEEEecCC
Confidence 66554 5788899999999998654
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.3e-05 Score=68.08 Aligned_cols=88 Identities=17% Similarity=0.147 Sum_probs=66.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccHH------HH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMVR------HM 138 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~~------~l 138 (243)
+|.+||.|.+|..+++.+...|.+|+++|+++. .......|.. +.+..++.+.+|+||.|......+..- .+
T Consensus 2 ~Ig~IGlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~ 80 (292)
T PRK15059 2 KLGFIGLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT 80 (292)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence 589999999999999999999999999999875 3344456764 345677788999999998765433211 23
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..+++|.++++++...
T Consensus 81 ~~~~~g~ivvd~sT~~ 96 (292)
T PRK15059 81 KASLKGKTIVDMSSIS 96 (292)
T ss_pred ccCCCCCEEEECCCCC
Confidence 4467888899877543
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=8.1e-06 Score=70.92 Aligned_cols=37 Identities=22% Similarity=0.136 Sum_probs=33.0
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.++||+++|+|++ +||+++|+.|...|++|++.++++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~ 44 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE 44 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch
Confidence 3679999999996 699999999999999999988774
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.9e-05 Score=65.61 Aligned_cols=88 Identities=19% Similarity=0.209 Sum_probs=57.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcC-Cccc--CH-HhhhcCCcEEEEccCChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEG-IPVL--TR-EDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G-~~~~--~~-~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
.+.|++|+|+|+|.+|...++.|...|++|++++++..+ +......+ .... .. ...+.++|+||.||+.+.. +.
T Consensus 7 ~l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~el-N~ 85 (202)
T PRK06718 7 DLSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPRV-NE 85 (202)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHHH-HH
Confidence 478999999999999999999999999999999765432 22222222 1111 11 2346789999999988763 33
Q ss_pred HHHccCCCCeEEEE
Q 037949 136 RHMKQMKNAAIVCN 149 (243)
Q Consensus 136 ~~l~~l~~g~~vvn 149 (243)
......+.+..+++
T Consensus 86 ~i~~~a~~~~lvn~ 99 (202)
T PRK06718 86 QVKEDLPENALFNV 99 (202)
T ss_pred HHHHHHHhCCcEEE
Confidence 22233344544444
|
|
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.3e-05 Score=66.68 Aligned_cols=84 Identities=12% Similarity=0.181 Sum_probs=62.9
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC----EEEEE-eCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH---H
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA----RVMGT-EIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV---R 136 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga----~V~v~-d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~---~ 136 (243)
++.+||+|.+|..++..+...|. +|+++ ++++.+...+...|+.+ .+..+.++++|+||.|+. +..+.. +
T Consensus 2 kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v~-~~~~~~vl~~ 80 (266)
T PLN02688 2 RVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVK-PQVVKDVLTE 80 (266)
T ss_pred eEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEEC-cHHHHHHHHH
Confidence 58999999999999999999997 88998 99988876666677754 356667788999999983 333221 1
Q ss_pred HHccCCCCeEEEEe
Q 037949 137 HMKQMKNAAIVCNI 150 (243)
Q Consensus 137 ~l~~l~~g~~vvnv 150 (243)
....++++.+++++
T Consensus 81 l~~~~~~~~~iIs~ 94 (266)
T PLN02688 81 LRPLLSKDKLLVSV 94 (266)
T ss_pred HHhhcCCCCEEEEe
Confidence 22345677777765
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=97.99 E-value=5.2e-05 Score=67.07 Aligned_cols=91 Identities=14% Similarity=0.159 Sum_probs=68.6
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++|+|.|+ |.+|+.+++.++++|++|+++..++.+.......|.+ +.+ ..+ .. .++|++++|+
T Consensus 137 ~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~ 216 (324)
T cd08292 137 VKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSV 216 (324)
T ss_pred CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECC
Confidence 457999999987 7999999999999999988876666555555556653 221 111 11 2699999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|... +. +.++.++++|+++.+|..
T Consensus 217 g~~~-~~-~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 217 GGKL-AG-ELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred CChh-HH-HHHHhhcCCcEEEEEecC
Confidence 8753 43 579999999999999864
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.1e-05 Score=67.79 Aligned_cols=40 Identities=33% Similarity=0.424 Sum_probs=35.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.+|+++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~ 45 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAE 45 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 9999999999999999999999877653
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=3e-05 Score=67.84 Aligned_cols=40 Identities=25% Similarity=0.226 Sum_probs=35.2
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+++++|+|+ |.||+.+|+.+...|++|+++++++..+..
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~ 43 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA 43 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 3689999998 699999999999999999999998876543
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.2e-05 Score=68.38 Aligned_cols=87 Identities=15% Similarity=0.059 Sum_probs=66.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc--------CC------c-ccCHHhhhcCCcEEEEccCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE--------GI------P-VLTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~--------G~------~-~~~~~~~~~~aDvvi~a~G~ 129 (243)
.+|.|+|+|.+|..+|..|...|.+|.++++++.+.+..... |. . +.++.+.++.+|+|+.|+..
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~~ 84 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVPS 84 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECch
Confidence 479999999999999999999999999999988765433332 31 1 12456667889999999877
Q ss_pred hhcccHHHHccCCCCeEEEEecCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
..+ .+.++.++++..++++.-+
T Consensus 85 ~~~--~~v~~~l~~~~~vi~~~~G 106 (328)
T PRK14618 85 KAL--RETLAGLPRALGYVSCAKG 106 (328)
T ss_pred HHH--HHHHHhcCcCCEEEEEeec
Confidence 653 3567888888888877553
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.4e-06 Score=69.86 Aligned_cols=45 Identities=18% Similarity=0.158 Sum_probs=40.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTE 106 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~ 106 (243)
+.|-+++|+|++ +||++.|+++...|=+|+++.++++++.++...
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~ 48 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE 48 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc
Confidence 468999999999 999999999999999999999999998776653
|
|
| >TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.2e-05 Score=73.16 Aligned_cols=88 Identities=19% Similarity=0.230 Sum_probs=60.7
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH-----------hhcCC-------------c-ccCHHhhhc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA-----------LTEGI-------------P-VLTREDVVS 118 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a-----------~~~G~-------------~-~~~~~~~~~ 118 (243)
=++|.|||+|.+|..+|..+...|.+|+++|+++++++.+ ...|. . +.+++ .+.
T Consensus 5 ~~kV~VIGaG~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~-~l~ 83 (503)
T TIGR02279 5 VVTVAVIGAGAMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLH-ALA 83 (503)
T ss_pred ccEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHH-HhC
Confidence 3679999999999999999999999999999999876543 22232 1 12233 356
Q ss_pred CCcEEEEccCChhcccHHH---H-ccCCCCeEEE-EecC
Q 037949 119 EAGLFVTTTENADIIMVRH---M-KQMKNAAIVC-NIGH 152 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~---l-~~l~~g~~vv-nvg~ 152 (243)
++|+||+|......+.... + ..+++++++. |.+.
T Consensus 84 ~aDlVIEav~E~~~vK~~vf~~l~~~~~~~~IlasnTSt 122 (503)
T TIGR02279 84 DAGLVIEAIVENLEVKKALFAQLEELCPADTIIASNTSS 122 (503)
T ss_pred CCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 8999999976433332222 3 3457777766 5443
|
This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families. |
| >PRK08507 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.96 E-value=5.3e-05 Score=66.69 Aligned_cols=87 Identities=20% Similarity=0.278 Sum_probs=64.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCCc--ccCHHhhhcCCcEEEEccCChhccc--HHHHc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGIP--VLTREDVVSEAGLFVTTTENADIIM--VRHMK 139 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~~--~~~~~~~~~~aDvvi~a~G~~~~i~--~~~l~ 139 (243)
+++|+|+|.+|..++..++..|. +|+++|+++.+...+...|.. ..+..++. ++|+||.|+....+.. .+...
T Consensus 2 ~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~~-~aD~Vilavp~~~~~~~~~~l~~ 80 (275)
T PRK08507 2 KIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEELK-KCDVIFLAIPVDAIIEILPKLLD 80 (275)
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHHh-cCCEEEEeCcHHHHHHHHHHHhc
Confidence 68999999999999999999885 788899999887777667752 33455544 5999999986543321 12234
Q ss_pred cCCCCeEEEEecCCC
Q 037949 140 QMKNAAIVCNIGHFD 154 (243)
Q Consensus 140 ~l~~g~~vvnvg~~~ 154 (243)
++++.+|+.+|...
T Consensus 81 -l~~~~iv~d~gs~k 94 (275)
T PRK08507 81 -IKENTTIIDLGSTK 94 (275)
T ss_pred -cCCCCEEEECccch
Confidence 67888898877643
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=3.7e-05 Score=66.49 Aligned_cols=42 Identities=24% Similarity=0.238 Sum_probs=37.1
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+++.+...|++|+++++++.++..
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~ 47 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLAS 47 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 3679999999987 89999999999999999999998876543
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=3.9e-05 Score=67.99 Aligned_cols=41 Identities=27% Similarity=0.381 Sum_probs=36.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.++|++++|+|++ .||+.+++.+...|++|+++++++.++.
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~ 47 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELA 47 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4689999999985 8999999999999999999999887653
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.9e-05 Score=68.07 Aligned_cols=40 Identities=25% Similarity=0.290 Sum_probs=35.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+|+.|...|++|+++++++.++.
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~ 44 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLR 44 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 679999999976 9999999999999999999999876553
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=8.9e-06 Score=70.62 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=32.2
Q ss_pred cccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|+ ++||+++|+.+...|++|++++++
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~ 42 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAG 42 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCc
Confidence 357999999998 489999999999999999998765
|
|
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.96 E-value=5.4e-05 Score=67.70 Aligned_cols=101 Identities=17% Similarity=0.244 Sum_probs=74.5
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----Hhhh---cCC
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----EDVV---SEA 120 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~~~---~~a 120 (243)
++++.+.. . ++|++|+|.|+|.+|..+++.++.+|+ +|++++.++.+...+...|.+ +++. .+.. .+.
T Consensus 155 ~~~l~~~~-~-~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~v 232 (339)
T cd08232 155 LHAVNRAG-D-LAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDF 232 (339)
T ss_pred HHHHHhcC-C-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCc
Confidence 45554432 2 389999999999999999999999999 799998887776655566653 2221 1111 248
Q ss_pred cEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|+++++.|....+. +.++.++++|++++.|..+
T Consensus 233 d~vld~~g~~~~~~-~~~~~L~~~G~~v~~g~~~ 265 (339)
T cd08232 233 DVVFEASGAPAALA-SALRVVRPGGTVVQVGMLG 265 (339)
T ss_pred cEEEECCCCHHHHH-HHHHHHhcCCEEEEEecCC
Confidence 99999988655554 5789999999999988543
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=97.95 E-value=5.1e-05 Score=67.27 Aligned_cols=91 Identities=20% Similarity=0.150 Sum_probs=69.6
Q ss_pred ccCc-EEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH-------hhh-cCCcEEEEccCCh
Q 037949 62 IAGK-IAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE-------DVV-SEAGLFVTTTENA 130 (243)
Q Consensus 62 l~g~-~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~-------~~~-~~aDvvi~a~G~~ 130 (243)
.+|+ +|+|.|+ |.+|..+++.++.+|++|++++.++.+...+...|.+ +.+.. ... ..+|++++|+|..
T Consensus 143 ~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~ 222 (323)
T TIGR02823 143 TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGH 222 (323)
T ss_pred CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHH
Confidence 5688 9999998 8999999999999999998887777666666666753 22211 111 2479999999876
Q ss_pred hcccHHHHccCCCCeEEEEecCCC
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
. ++ +.++.++++|+++.+|...
T Consensus 223 ~-~~-~~~~~l~~~G~~v~~g~~~ 244 (323)
T TIGR02823 223 T-LA-NVLAQLKYGGAVAACGLAG 244 (323)
T ss_pred H-HH-HHHHHhCCCCEEEEEcccC
Confidence 4 44 5799999999999998653
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.8e-05 Score=76.61 Aligned_cols=70 Identities=23% Similarity=0.168 Sum_probs=52.5
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc---------------------hhHHHHhhcCCcc-cC-------
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL---------------------ICALQALTEGIPV-LT------- 112 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~---------------------~r~~~a~~~G~~~-~~------- 112 (243)
..|++|+|+|+||+|+.+|..|+..|++|+++|..+ .++..+...|++. .+
T Consensus 135 ~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~~ 214 (564)
T PRK12771 135 DTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGEDI 214 (564)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCcC
Confidence 479999999999999999999999999999998532 3344556677642 11
Q ss_pred -HHhhhcCCcEEEEccCChh
Q 037949 113 -REDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 113 -~~~~~~~aDvvi~a~G~~~ 131 (243)
.++...++|+||+++|...
T Consensus 215 ~~~~~~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 215 TLEQLEGEFDAVFVAIGAQL 234 (564)
T ss_pred CHHHHHhhCCEEEEeeCCCC
Confidence 1222346899999998754
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.4e-05 Score=67.63 Aligned_cols=37 Identities=30% Similarity=0.245 Sum_probs=32.6
Q ss_pred cccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.||+++|+|+ ++||+++|+.|...|++|+++.+++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~ 46 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD 46 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch
Confidence 367899999998 4899999999999999999887653
|
|
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=97.95 E-value=8.1e-05 Score=67.35 Aligned_cols=97 Identities=24% Similarity=0.151 Sum_probs=70.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHH-hCCC-EEEEEeCCchhHHHHhh-----cCCcc---cCHHhhhcCCcEEEEccCCh-h
Q 037949 63 AGKIAVDCGHGDVGRGCAAALK-AVGA-RVMGTEIDLICALQALT-----EGIPV---LTREDVVSEAGLFVTTTENA-D 131 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~-~~Ga-~V~v~d~~~~r~~~a~~-----~G~~~---~~~~~~~~~aDvvi~a~G~~-~ 131 (243)
..++++|+|+|.+|+..+..+. .++. +|.++++++++...... .|.++ .+.++.+.++|+|+.||++. +
T Consensus 128 ~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p 207 (326)
T TIGR02992 128 DSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETP 207 (326)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 4579999999999999999997 4786 79999999887543221 24433 34677788999999998764 3
Q ss_pred cccHHHHccCCCCeEEEEecCCC---CCCChhHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDL 162 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l 162 (243)
.+.. +.+++|..++.+|... .++|.+.+
T Consensus 208 ~i~~---~~l~~g~~i~~vg~~~p~~rEld~~~l 238 (326)
T TIGR02992 208 ILHA---EWLEPGQHVTAMGSDAEHKNEIDPAVI 238 (326)
T ss_pred EecH---HHcCCCcEEEeeCCCCCCceecCHHHH
Confidence 4543 3478999999888652 45665544
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=97.95 E-value=5.9e-05 Score=66.21 Aligned_cols=91 Identities=20% Similarity=0.211 Sum_probs=71.2
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC----HHhh---h-cCCcEEEEccCCh
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT----REDV---V-SEAGLFVTTTENA 130 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~---~-~~aDvvi~a~G~~ 130 (243)
..+|++++|.|+ |.+|..+++.++.+|++|+++..++.+...+...|++ +.. ..+. . .+.|++++++|..
T Consensus 140 ~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~ 219 (320)
T cd08243 140 LQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA 219 (320)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHhCCCceEEEECCChH
Confidence 357999999998 8999999999999999999988888877777666763 211 1111 1 3699999999874
Q ss_pred hcccHHHHccCCCCeEEEEecCC
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+. +.++.++++|+++.+|..
T Consensus 220 -~~~-~~~~~l~~~g~~v~~g~~ 240 (320)
T cd08243 220 -TLK-DSLRHLRPGGIVCMTGLL 240 (320)
T ss_pred -HHH-HHHHHhccCCEEEEEccC
Confidence 454 578999999999999864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=97.94 E-value=5.2e-05 Score=67.30 Aligned_cols=102 Identities=16% Similarity=0.191 Sum_probs=74.6
Q ss_pred hhhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCc-ccC-----HHhhh----
Q 037949 50 LPDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIP-VLT-----REDVV---- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~-~~~-----~~~~~---- 117 (243)
.|+++.+... ..+|++|+|.| .|++|+.+++.++..|++|++++.++.+...+.. .|++ +++ ..+.+
T Consensus 133 a~~~l~~~~~-~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~ 211 (329)
T cd05288 133 AYFGLTEIGK-PKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAA 211 (329)
T ss_pred HHHHHHhccC-CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhc
Confidence 3455433222 35789999999 5899999999999999999999988887766655 6653 222 11111
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|++++|+|.. .++ ..++.++++|+++++|..+
T Consensus 212 ~~~~d~vi~~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 247 (329)
T cd05288 212 PDGIDVYFDNVGGE-ILD-AALTLLNKGGRIALCGAIS 247 (329)
T ss_pred cCCceEEEEcchHH-HHH-HHHHhcCCCceEEEEeecc
Confidence 3689999999874 454 4789999999999998653
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.94 E-value=3.3e-05 Score=62.73 Aligned_cols=86 Identities=20% Similarity=0.167 Sum_probs=56.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC-Cccc--CH-HhhhcCCcEEEEccCChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG-IPVL--TR-EDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G-~~~~--~~-~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+.|++|+|+|+|.+|..-++.|...|++|++++.+. .......+ .... .+ ++.+.++|+|+.||+.+. ++..
T Consensus 10 ~l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp~~--~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e-~N~~ 86 (157)
T PRK06719 10 NLHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSPEI--CKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHA-VNMM 86 (157)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCcc--CHHHHhccCcEEEecccChhcCCCceEEEECCCCHH-HHHH
Confidence 4789999999999999999999999999999985432 22222222 1211 11 223678999999998766 3332
Q ss_pred HHccCCCCeEEEE
Q 037949 137 HMKQMKNAAIVCN 149 (243)
Q Consensus 137 ~l~~l~~g~~vvn 149 (243)
.....+....+++
T Consensus 87 i~~~a~~~~~vn~ 99 (157)
T PRK06719 87 VKQAAHDFQWVNV 99 (157)
T ss_pred HHHHHHHCCcEEE
Confidence 2222344444444
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.94 E-value=2e-05 Score=69.53 Aligned_cols=43 Identities=28% Similarity=0.328 Sum_probs=38.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQA 103 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a 103 (243)
.++||+++|+|+. +||+++|..|...|++|++++++++++...
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~ 48 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEET 48 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4789999999999 899999999999999999999998876443
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=97.94 E-value=6.5e-05 Score=66.30 Aligned_cols=92 Identities=14% Similarity=0.148 Sum_probs=71.2
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|.+|+|.|+ |.+|+.+++.++++|++|+++..++.+...+...|++ +++ ..+ .. .+.|++++|+
T Consensus 136 ~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 215 (323)
T cd05282 136 LPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAV 215 (323)
T ss_pred CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECC
Confidence 357999999998 6999999999999999999888877777677666763 222 111 11 3689999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|+.... ..++.++++|+++.+|..+
T Consensus 216 g~~~~~--~~~~~l~~~g~~v~~g~~~ 240 (323)
T cd05282 216 GGESAT--RLARSLRPGGTLVNYGLLS 240 (323)
T ss_pred CCHHHH--HHHHhhCCCCEEEEEccCC
Confidence 986643 4688999999999988653
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=97.93 E-value=6e-05 Score=67.07 Aligned_cols=97 Identities=15% Similarity=0.128 Sum_probs=73.5
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCc-ccC----HHhhh-----cCCcEEEEccCChh
Q 037949 64 GKIAVDCGH-GDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIP-VLT----REDVV-----SEAGLFVTTTENAD 131 (243)
Q Consensus 64 g~~vlViG~-G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~~-----~~aDvvi~a~G~~~ 131 (243)
|++++|.|+ |.+|+.+++.++.+| ++|++++.++.+...+...|++ +++ ..+.+ .+.|++++++|...
T Consensus 150 g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~ 229 (336)
T cd08252 150 GKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQ 229 (336)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHH
Confidence 899999995 899999999999999 8999998888877677666753 221 11111 36899999998765
Q ss_pred cccHHHHccCCCCeEEEEecCCCCCCChhH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFDNEIDMLD 161 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~~~id~~~ 161 (243)
.+. ..++.++++|+++++|.....++...
T Consensus 230 ~~~-~~~~~l~~~g~~v~~g~~~~~~~~~~ 258 (336)
T cd08252 230 HWD-AMAELIAPQGHICLIVDPQEPLDLGP 258 (336)
T ss_pred HHH-HHHHHhcCCCEEEEecCCCCcccchh
Confidence 565 57899999999999886533344443
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.92 E-value=7.3e-05 Score=66.73 Aligned_cols=88 Identities=14% Similarity=0.136 Sum_probs=67.0
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhh---hcCCcEEEEccCCh---hcccHHHH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDV---VSEAGLFVTTTENA---DIIMVRHM 138 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~---~~~aDvvi~a~G~~---~~i~~~~l 138 (243)
+|.|+|+|.+|..++..+...|.+|+++|+++.+.......|.. ..++.+. +..+|+|+.|+... .+++ +..
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~~-~l~ 80 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVLE-ELA 80 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHHH-HHH
Confidence 68999999999999999999999999999999987666666653 2344443 35689999987654 2332 345
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..++++.++++.+-..
T Consensus 81 ~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 81 PTLEKGDIVIDGGNSY 96 (298)
T ss_pred hhCCCCCEEEECCCCC
Confidence 6678899999977653
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=97.92 E-value=6e-05 Score=71.95 Aligned_cols=85 Identities=18% Similarity=0.138 Sum_probs=59.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-------------------cC-Cc-ccCHHhhhcCCcEE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-------------------EG-IP-VLTREDVVSEAGLF 123 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-------------------~G-~~-~~~~~~~~~~aDvv 123 (243)
++|.|||+|.||..+|..+...|.+|+++|+++.+.+.... .| .. +.++.++++++|+|
T Consensus 5 ~kIavIG~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~V 84 (495)
T PRK07531 5 MKAACIGGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADWI 84 (495)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCEE
Confidence 57999999999999999999999999999999887533210 12 22 23456778899999
Q ss_pred EEccCChhcccHHH---H-ccCCCCeEEEE
Q 037949 124 VTTTENADIIMVRH---M-KQMKNAAIVCN 149 (243)
Q Consensus 124 i~a~G~~~~i~~~~---l-~~l~~g~~vvn 149 (243)
++|......+.... + ..++++.++.+
T Consensus 85 ieavpe~~~vk~~l~~~l~~~~~~~~iI~S 114 (495)
T PRK07531 85 QESVPERLDLKRRVLAEIDAAARPDALIGS 114 (495)
T ss_pred EEcCcCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 99976543222211 3 34566665554
|
|
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.92 E-value=5.1e-05 Score=68.08 Aligned_cols=92 Identities=20% Similarity=0.225 Sum_probs=72.4
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh------cCCcEEEEccC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDVV------SEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~------~~aDvvi~a~G 128 (243)
.+|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +++ ..+.+ .+.|++++|.|
T Consensus 162 ~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 241 (341)
T PRK05396 162 LVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSG 241 (341)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCCEEEECCC
Confidence 479999999999999999999999999 688888888777666667764 222 11211 36999999988
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
....+. ..++.++++|.+++.|..+
T Consensus 242 ~~~~~~-~~~~~l~~~G~~v~~g~~~ 266 (341)
T PRK05396 242 APSAFR-QMLDNMNHGGRIAMLGIPP 266 (341)
T ss_pred CHHHHH-HHHHHHhcCCEEEEEecCC
Confidence 766665 4788899999999998754
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=6.5e-05 Score=65.57 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=32.7
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++||+++|+|++ +||+++|+.+...|++|+++++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~ 42 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 42 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch
Confidence 578999999996 699999999999999999988873
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.7e-05 Score=69.56 Aligned_cols=40 Identities=25% Similarity=0.332 Sum_probs=36.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.+++++|+|++ +||+.+++.+...|++|+++++++.++.
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~ 45 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQ 45 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 578999999995 9999999999999999999999887654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=3e-05 Score=66.63 Aligned_cols=39 Identities=28% Similarity=0.308 Sum_probs=35.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
++||+++|+|++ .||+.+++.|...|++|+++++++.++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 46 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDAL 46 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 579999999985 999999999999999999999987654
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.91 E-value=2e-05 Score=70.68 Aligned_cols=39 Identities=28% Similarity=0.272 Sum_probs=33.1
Q ss_pred cccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.||+++|+|+ .+||+++|+.|...|++|++ .++..++
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 478999999999 68999999999999999988 4444443
|
|
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.91 E-value=5.7e-05 Score=69.19 Aligned_cols=89 Identities=25% Similarity=0.299 Sum_probs=63.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-----cCHHhhhcCCcEEEEccCChh---cccHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-----LTREDVVSEAGLFVTTTENAD---IIMVR 136 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-----~~~~~~~~~aDvvi~a~G~~~---~i~~~ 136 (243)
++|.|+|.|.||..+|..++..|.+|.++++++.....+...+..+ .+..+.+.++|+||.|+.... ++. +
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl~-~ 79 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALLA-E 79 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHHH-H
Confidence 4699999999999999999999998888888876544333333322 234566789999999986543 232 2
Q ss_pred HHc-cCCCCeEEEEecCCC
Q 037949 137 HMK-QMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~-~l~~g~~vvnvg~~~ 154 (243)
... .++++.+|.++|...
T Consensus 80 l~~~~l~~~~ivtDv~SvK 98 (359)
T PRK06545 80 LADLELKPGVIVTDVGSVK 98 (359)
T ss_pred HhhcCCCCCcEEEeCcccc
Confidence 222 367888888877654
|
|
| >PRK06407 ornithine cyclodeaminase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00012 Score=65.71 Aligned_cols=99 Identities=14% Similarity=0.042 Sum_probs=72.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHhh-----cCCcc---cCHHhhhcCCcEEEEccCChh-
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQALT-----EGIPV---LTREDVVSEAGLFVTTTENAD- 131 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~~-----~G~~~---~~~~~~~~~aDvvi~a~G~~~- 131 (243)
.-++++|+|+|..|+..++.+.. +.. +|.++++++.+.....+ .|.++ .+.++++.++|+|+.||++..
T Consensus 116 da~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P 195 (301)
T PRK06407 116 NVENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTP 195 (301)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCc
Confidence 35899999999999988777765 455 79999999987543221 24432 357888999999999987654
Q ss_pred cccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
++.. +++++|..|+.+|... .|+|...+..
T Consensus 196 ~~~~---~~l~pg~hV~aiGs~~p~~~El~~~~l~~ 228 (301)
T PRK06407 196 IFNR---KYLGDEYHVNLAGSNYPNRREAEHSVLND 228 (301)
T ss_pred EecH---HHcCCCceEEecCCCCCCcccCCHHHHHh
Confidence 4543 4678999999999764 5677655443
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=3.2e-05 Score=69.18 Aligned_cols=36 Identities=36% Similarity=0.469 Sum_probs=32.7
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|+| +||+++|+.|...|++|++.++.
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 4689999999996 89999999999999999998754
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.89 E-value=5.1e-05 Score=66.21 Aligned_cols=35 Identities=34% Similarity=0.524 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
++||+++|+|++ .||+.+++.+...|++|++++++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 578999999986 89999999999999999999988
|
|
| >PRK06823 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00014 Score=65.66 Aligned_cols=99 Identities=18% Similarity=0.129 Sum_probs=72.8
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh----hcCCcc---cCHHhhhcCCcEEEEccCCh-hc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL----TEGIPV---LTREDVVSEAGLFVTTTENA-DI 132 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~----~~G~~~---~~~~~~~~~aDvvi~a~G~~-~~ 132 (243)
.-++++|+|+|..++..++.+.. +.. +|.++++++++..... ..+.++ .+.++++.+||+|+.||++. ++
T Consensus 127 d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIV~taT~s~~P~ 206 (315)
T PRK06823 127 HVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAANLIVTTTPSREPL 206 (315)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHhcCCCEEEEecCCCCce
Confidence 35899999999999988887765 334 7999999998864322 124443 35678889999999998765 44
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
+. .+.+++|..|+.+|... .|+|.+.+..
T Consensus 207 ~~---~~~l~~G~hi~~iGs~~p~~~Eld~~~l~~ 238 (315)
T PRK06823 207 LQ---AEDIQPGTHITAVGADSPGKQELDAELVAR 238 (315)
T ss_pred eC---HHHcCCCcEEEecCCCCcccccCCHHHHhh
Confidence 54 34679999999999763 5677665543
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.8e-05 Score=72.45 Aligned_cols=69 Identities=23% Similarity=0.279 Sum_probs=55.0
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC---HHhhhcCCcEEEEccCCh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT---REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~---~~~~~~~aDvvi~a~G~~ 130 (243)
+.|++|+|+|+|++|+.+++.|+..|++|+++|.++.+...+...|+.... ..+.+.++|+|+.++|.+
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~ 81 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFR 81 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCC
Confidence 578999999999999999999999999999999877665444555765432 234467899999998864
|
|
| >PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline [] | Back alignment and domain information |
|---|
Probab=97.88 E-value=6.8e-05 Score=67.52 Aligned_cols=97 Identities=24% Similarity=0.188 Sum_probs=59.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh---h-cCCc---ccCHHhhhcCCcEEEEccCChh---
Q 037949 64 GKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL---T-EGIP---VLTREDVVSEAGLFVTTTENAD--- 131 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~---~-~G~~---~~~~~~~~~~aDvvi~a~G~~~--- 131 (243)
-++++|+|+|..++..+..+.. ++. +|.++++++++.+... . .+.+ +.+.++++.++|+|+.||.+..
T Consensus 128 ~~~l~viGaG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~~P 207 (313)
T PF02423_consen 128 ARTLGVIGAGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTPAP 207 (313)
T ss_dssp --EEEEE--SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCCCc
Confidence 4799999999999988887765 666 8999999998754322 1 2443 2357888999999999987654
Q ss_pred cccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
.++ -+.+++|..|+.+|... .|+|...+.
T Consensus 208 ~~~---~~~l~~g~hi~~iGs~~~~~~El~~~~~~ 239 (313)
T PF02423_consen 208 VFD---AEWLKPGTHINAIGSYTPGMRELDDELLK 239 (313)
T ss_dssp SB----GGGS-TT-EEEE-S-SSTTBESB-HHHHH
T ss_pred ccc---HHHcCCCcEEEEecCCCCchhhcCHHHhc
Confidence 454 35789999999999764 356655444
|
The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A. |
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=6.3e-05 Score=65.15 Aligned_cols=40 Identities=40% Similarity=0.457 Sum_probs=35.6
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++++++|+|+ |.||+.+++.|...|++|+++++++.++.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 44 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGA 44 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57899999998 49999999999999999999999876543
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=97.88 E-value=6.5e-05 Score=69.98 Aligned_cols=88 Identities=22% Similarity=0.216 Sum_probs=63.9
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-------------------cC-Ccc-cCHHhhhcCCcEEE
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-------------------EG-IPV-LTREDVVSEAGLFV 124 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-------------------~G-~~~-~~~~~~~~~aDvvi 124 (243)
+|.|+|.|.+|..+|..+...|.+|+++|+++.+...... .| ... .+..++++++|++|
T Consensus 2 kI~vIGlG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advvi 81 (411)
T TIGR03026 2 KIAVIGLGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVII 81 (411)
T ss_pred EEEEECCCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEEE
Confidence 6899999999999999999999999999999887643221 12 221 23556678999999
Q ss_pred EccCChhc---------cc---HHHHccCCCCeEEEEecCC
Q 037949 125 TTTENADI---------IM---VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 125 ~a~G~~~~---------i~---~~~l~~l~~g~~vvnvg~~ 153 (243)
.|++++.. +. ......++++.++++.+..
T Consensus 82 i~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv 122 (411)
T TIGR03026 82 ICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTV 122 (411)
T ss_pred EEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcC
Confidence 99886531 21 1234556888888887643
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00012 Score=64.90 Aligned_cols=81 Identities=16% Similarity=0.148 Sum_probs=55.8
Q ss_pred hhhhhhhhccc-cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-cCC--c--ccC----HHhhhc
Q 037949 50 LPDGLMRATDI-TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-EGI--P--VLT----REDVVS 118 (243)
Q Consensus 50 ~~~av~~~~~~-~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~G~--~--~~~----~~~~~~ 118 (243)
++.++++.... .+.+++|+|+|+|+.+++++..|...|+ +|+++++++++.+.... .+. . ... ..+.+.
T Consensus 110 ~~~~l~~~~~~~~~~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~ 189 (282)
T TIGR01809 110 IAGALANIGKFEPLAGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEK 189 (282)
T ss_pred HHHHHHhhCCccccCCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhccc
Confidence 44555442211 3578999999999999999999999998 79999999887543322 111 1 111 123346
Q ss_pred CCcEEEEccCCh
Q 037949 119 EAGLFVTTTENA 130 (243)
Q Consensus 119 ~aDvvi~a~G~~ 130 (243)
++|+||+||+..
T Consensus 190 ~~DiVInaTp~g 201 (282)
T TIGR01809 190 AAEVLVSTVPAD 201 (282)
T ss_pred CCCEEEECCCCC
Confidence 799999998653
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00013 Score=64.47 Aligned_cols=96 Identities=17% Similarity=0.228 Sum_probs=68.1
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC----EEEEEeCCchhHHHHhh-cCCcc-cCHHhhhcCCcEEEEccCChhccc---H
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA----RVMGTEIDLICALQALT-EGIPV-LTREDVVSEAGLFVTTTENADIIM---V 135 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga----~V~v~d~~~~r~~~a~~-~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~---~ 135 (243)
.++++||+|.+|..++..+...|. +|+++|+++.+++.+.+ .|... .+..+.++++|+||.|+... .+. .
T Consensus 3 ~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavkP~-~~~~vl~ 81 (272)
T PRK12491 3 KQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIKPD-LYSSVIN 81 (272)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeChH-HHHHHHH
Confidence 479999999999999999998884 69999999888765554 67653 34566778999999997642 222 1
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.-..++++.+++.+--+ ++.+.+..
T Consensus 82 ~l~~~~~~~~lvISi~AG---i~i~~l~~ 107 (272)
T PRK12491 82 QIKDQIKNDVIVVTIAAG---KSIKSTEN 107 (272)
T ss_pred HHHHhhcCCcEEEEeCCC---CcHHHHHH
Confidence 122334567788876554 55566654
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=97.87 E-value=6.5e-05 Score=79.45 Aligned_cols=92 Identities=14% Similarity=0.073 Sum_probs=74.4
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH------
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV------ 135 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~------ 135 (243)
..++|.+||.|.+|..+|..|...|.+|.++|+++.+.......|+. +.++.++.+++|+||.|..+...+..
T Consensus 3 ~~~~IGfIGLG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~~ 82 (1378)
T PLN02858 3 SAGVVGFVGLDSLSFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGDE 82 (1378)
T ss_pred CCCeEEEEchhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhchh
Confidence 46789999999999999999999999999999999988776777875 44678888899999999876544331
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
..+..+++|.++++.+...
T Consensus 83 g~~~~l~~g~iivd~STi~ 101 (1378)
T PLN02858 83 GAAKGLQKGAVILIRSTIL 101 (1378)
T ss_pred hHHhcCCCcCEEEECCCCC
Confidence 1345678899999987653
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.87 E-value=3.9e-05 Score=68.75 Aligned_cols=66 Identities=20% Similarity=0.163 Sum_probs=51.4
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-----------hcCC-------------c-ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-----------TEGI-------------P-VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-----------~~G~-------------~-~~~~~~~~~~ 119 (243)
++|+|+|+|.+|..+|..+...|.+|+++|+++.....+. ..|. . +.++.+++++
T Consensus 3 ~~V~VIG~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~~ 82 (308)
T PRK06129 3 GSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVAD 82 (308)
T ss_pred cEEEEECccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhCC
Confidence 4799999999999999999999999999999987654422 2332 1 2345667789
Q ss_pred CcEEEEccCCh
Q 037949 120 AGLFVTTTENA 130 (243)
Q Consensus 120 aDvvi~a~G~~ 130 (243)
+|+|++|+...
T Consensus 83 ad~Vi~avpe~ 93 (308)
T PRK06129 83 ADYVQESAPEN 93 (308)
T ss_pred CCEEEECCcCC
Confidence 99999997643
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0001 Score=64.86 Aligned_cols=93 Identities=14% Similarity=0.145 Sum_probs=63.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-c---CC-cccCHHhh-hcCCcEEEEccCCh--hcc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-E---GI-PVLTREDV-VSEAGLFVTTTENA--DII 133 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~---G~-~~~~~~~~-~~~aDvvi~a~G~~--~~i 133 (243)
.++++++|+|+|++|+.++..+...|++|+++++++.+.....+ . +. ...+..+. ..++|+||+|++.. +.+
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~gm~~~~ 194 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAGMSGNI 194 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhhcccCccEEEECCCCCCCCCC
Confidence 46899999999999999999999999999999999876533221 1 21 22233332 35799999998652 111
Q ss_pred cH--HHHccCCCCeEEEEecCCC
Q 037949 134 MV--RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 134 ~~--~~l~~l~~g~~vvnvg~~~ 154 (243)
.. -..+.++++.+++++...+
T Consensus 195 ~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 195 DEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred CCCCCCHHHcCCCCEEEEeccCC
Confidence 10 0134568888898886654
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=97.86 E-value=8.5e-05 Score=66.49 Aligned_cols=101 Identities=19% Similarity=0.181 Sum_probs=75.9
Q ss_pred hhhhhhhccccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV-- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~-- 117 (243)
|+++... . ..+|++++|.|+++ +|+.+++.++++|++|+++..++.+...+...|++ +++ ..+ ..
T Consensus 155 ~~~~~~~-~-~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 232 (341)
T cd08297 155 YKALKKA-G-LKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGG 232 (341)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcC
Confidence 4555433 2 35799999999985 99999999999999999999998887666666753 221 111 11
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|+++++.+....++ ..++.++++|+++..|..+
T Consensus 233 ~~vd~vl~~~~~~~~~~-~~~~~l~~~g~~v~~g~~~ 268 (341)
T cd08297 233 GGAHAVVVTAVSAAAYE-QALDYLRPGGTLVCVGLPP 268 (341)
T ss_pred CCCCEEEEcCCchHHHH-HHHHHhhcCCEEEEecCCC
Confidence 36899999877766665 5789999999999998653
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00012 Score=64.99 Aligned_cols=95 Identities=16% Similarity=0.184 Sum_probs=69.1
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH---h----hhcCCc
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE---D----VVSEAG 121 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~---~----~~~~aD 121 (243)
|+++.+. . ..+|++++|.|+ |++|+.+++.++++|++|++++.+ ..+...|++ +++.. + ...+.|
T Consensus 152 ~~~l~~~-~-~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~~----~~~~~~g~~~~~~~~~~~~~l~~~~~~~d 225 (325)
T cd08264 152 YHALKTA-G-LGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSRK----DWLKEFGADEVVDYDEVEEKVKEITKMAD 225 (325)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeHH----HHHHHhCCCeeecchHHHHHHHHHhCCCC
Confidence 4555432 2 457999999998 999999999999999999887632 334445653 22211 1 125689
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
++++++|.. .+. +.++.++++|.++.+|..
T Consensus 226 ~vl~~~g~~-~~~-~~~~~l~~~g~~v~~g~~ 255 (325)
T cd08264 226 VVINSLGSS-FWD-LSLSVLGRGGRLVTFGTL 255 (325)
T ss_pred EEEECCCHH-HHH-HHHHhhccCCEEEEEecC
Confidence 999999874 454 579999999999998853
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=9.7e-05 Score=69.51 Aligned_cols=87 Identities=18% Similarity=0.184 Sum_probs=66.5
Q ss_pred EEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhH-HHHhhcCCccc-CHHhhhcCCcEEEEccCChh---cccHHHHc
Q 037949 66 IAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICA-LQALTEGIPVL-TREDVVSEAGLFVTTTENAD---IIMVRHMK 139 (243)
Q Consensus 66 ~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~-~~a~~~G~~~~-~~~~~~~~aDvvi~a~G~~~---~i~~~~l~ 139 (243)
+++|+| +|.||..+|..++..|.+|+++|+++.+. ..+...|.... +..+.+.++|+|+.|+.... ++. +...
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl~-~l~~ 80 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVIK-EVAP 80 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHHH-HHHh
Confidence 689997 79999999999999999999999998764 33445566433 45667789999999976533 232 3345
Q ss_pred cCCCCeEEEEecCC
Q 037949 140 QMKNAAIVCNIGHF 153 (243)
Q Consensus 140 ~l~~g~~vvnvg~~ 153 (243)
.++++.++++++..
T Consensus 81 ~l~~~~iViDvsSv 94 (437)
T PRK08655 81 HVKEGSLLMDVTSV 94 (437)
T ss_pred hCCCCCEEEEcccc
Confidence 67889999998864
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.85 E-value=4.1e-05 Score=66.25 Aligned_cols=37 Identities=24% Similarity=0.433 Sum_probs=33.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+.||+++|+|+. .||+.+|+.+...|++|+++++++.
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~ 41 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP 41 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 578999999976 9999999999999999999988764
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=6.4e-05 Score=65.31 Aligned_cols=36 Identities=25% Similarity=0.229 Sum_probs=31.6
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++||+++|+|+ ++||+++|+.+...|++|+++++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~ 42 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD 42 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH
Confidence 57899999995 4899999999999999999886653
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00011 Score=65.74 Aligned_cols=66 Identities=21% Similarity=0.181 Sum_probs=51.1
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----cCC--------------c-ccCHHhhhcCCcEEE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----EGI--------------P-VLTREDVVSEAGLFV 124 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----~G~--------------~-~~~~~~~~~~aDvvi 124 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++.+++.+.. .+. . ..+..+.++++|+|+
T Consensus 5 ~~I~vIGaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlVi 84 (311)
T PRK06130 5 QNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLVI 84 (311)
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEEE
Confidence 67999999999999999999999999999999877644432 121 1 123456678999999
Q ss_pred EccCCh
Q 037949 125 TTTENA 130 (243)
Q Consensus 125 ~a~G~~ 130 (243)
+|+...
T Consensus 85 ~av~~~ 90 (311)
T PRK06130 85 EAVPEK 90 (311)
T ss_pred EeccCc
Confidence 997553
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=6.1e-05 Score=66.44 Aligned_cols=36 Identities=36% Similarity=0.658 Sum_probs=33.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++|++++|+|++ .||+.+|+.+...|++|++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence 578999999987 999999999999999999988764
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.84 E-value=8.8e-05 Score=73.23 Aligned_cols=90 Identities=16% Similarity=0.208 Sum_probs=66.6
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhh-cCCcEEEEccCChh---cccHHHH
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVV-SEAGLFVTTTENAD---IIMVRHM 138 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~-~~aDvvi~a~G~~~---~i~~~~l 138 (243)
-.+++|||+|.||..+|..++..|.+|+++|+++.+ ..+...|+.. .+..+.+ .++|+|+.|+.... ++..-.+
T Consensus 52 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~-~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~l~~ 130 (667)
T PLN02712 52 QLKIAIIGFGNYGQFLAKTLISQGHTVLAHSRSDHS-LAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKSLPL 130 (667)
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHhhhh
Confidence 368999999999999999999999999999998654 3566667643 3456644 46999999986432 2322112
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..++++.+|++++...
T Consensus 131 ~~l~~g~iVvDv~SvK 146 (667)
T PLN02712 131 QRLKRNTLFVDVLSVK 146 (667)
T ss_pred hcCCCCeEEEECCCCc
Confidence 4578899999997544
|
|
| >PRK06046 alanine dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00015 Score=65.65 Aligned_cols=96 Identities=21% Similarity=0.174 Sum_probs=69.5
Q ss_pred CcEEEEEcCChHHHHHHHHHH-hCCC-EEEEEeCCchhHHHHhh-----cCCc---ccCHHhhhcCCcEEEEccCCh-hc
Q 037949 64 GKIAVDCGHGDVGRGCAAALK-AVGA-RVMGTEIDLICALQALT-----EGIP---VLTREDVVSEAGLFVTTTENA-DI 132 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~-~~Ga-~V~v~d~~~~r~~~a~~-----~G~~---~~~~~~~~~~aDvvi~a~G~~-~~ 132 (243)
-++++|+|+|.+|+..+..+. ..+. +|.++|+++.+.....+ .+.. +.+.++++. +|+|+.||++. ++
T Consensus 129 ~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~P~ 207 (326)
T PRK06046 129 SKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRKPV 207 (326)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCCcE
Confidence 479999999999999998887 4566 68889999887644332 1432 234667776 99999998765 44
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
+.. +.+++|..|+.+|... .|+|...+.
T Consensus 208 ~~~---~~l~~g~hV~~iGs~~p~~~El~~~~~~ 238 (326)
T PRK06046 208 VKA---EWIKEGTHINAIGADAPGKQELDPEILL 238 (326)
T ss_pred ecH---HHcCCCCEEEecCCCCCccccCCHHHHh
Confidence 543 4569999999999763 467755443
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00012 Score=63.26 Aligned_cols=40 Identities=30% Similarity=0.357 Sum_probs=35.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++|++++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 44 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLA 44 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 8999999999999999999999877653
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00012 Score=65.52 Aligned_cols=85 Identities=14% Similarity=0.092 Sum_probs=61.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC--------------Cc-ccCHHhhhcCCcEEEEccCCh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG--------------IP-VLTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G--------------~~-~~~~~~~~~~aDvvi~a~G~~ 130 (243)
+|+|+|+|.+|..++..+...|.+|.++|+++.+.+.....+ .. ..+.++.+.++|+|+.|+...
T Consensus 3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~~ 82 (325)
T PRK00094 3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVPSQ 82 (325)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCCHH
Confidence 699999999999999999999999999999987765444432 22 123455677899999998664
Q ss_pred hc---ccHHHHccCCCCeEEEEec
Q 037949 131 DI---IMVRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 131 ~~---i~~~~l~~l~~g~~vvnvg 151 (243)
.. +. .....++++.+++++.
T Consensus 83 ~~~~v~~-~l~~~~~~~~~vi~~~ 105 (325)
T PRK00094 83 ALREVLK-QLKPLLPPDAPIVWAT 105 (325)
T ss_pred HHHHHHH-HHHhhcCCCCEEEEEe
Confidence 32 21 2234456777888763
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.83 E-value=7.7e-05 Score=66.29 Aligned_cols=98 Identities=19% Similarity=0.176 Sum_probs=65.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-cC-----Cccc---CHHhhhcCCcEEEEccCC-
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-EG-----IPVL---TREDVVSEAGLFVTTTEN- 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~G-----~~~~---~~~~~~~~aDvvi~a~G~- 129 (243)
...+++|+|+|+|+.|++++..|...|+ +|+++|+++.+.+.... .+ ..+. +..+.+.++|+||+||..
T Consensus 124 ~~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~G 203 (284)
T PRK12549 124 DASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTG 203 (284)
T ss_pred CccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCC
Confidence 3678999999999999999999999998 89999999887643322 11 1111 223456789999999632
Q ss_pred -hh----cccHHHHccCCCCeEEEEecCCCCCCChhHHH
Q 037949 130 -AD----IIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLE 163 (243)
Q Consensus 130 -~~----~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~ 163 (243)
.+ .++ .+.++++..+.++-..+ .+.+.+.
T Consensus 204 m~~~~~~~~~---~~~l~~~~~v~DivY~P--~~T~ll~ 237 (284)
T PRK12549 204 MAKHPGLPLP---AELLRPGLWVADIVYFP--LETELLR 237 (284)
T ss_pred CCCCCCCCCC---HHHcCCCcEEEEeeeCC--CCCHHHH
Confidence 11 122 23466777777765543 3444443
|
|
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00014 Score=62.14 Aligned_cols=91 Identities=21% Similarity=0.248 Sum_probs=61.6
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCc----------hhHHHHhhcC-Ccc------cCHHhhh-cCC
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDL----------ICALQALTEG-IPV------LTREDVV-SEA 120 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~----------~r~~~a~~~G-~~~------~~~~~~~-~~a 120 (243)
..+.|++|+|.|+|.+|+.+|+.|...|+ .|.++|.+. ..+......+ ... .+.++.+ .++
T Consensus 19 ~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (217)
T cd05211 19 DSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQDYFPGEAILGLDV 98 (217)
T ss_pred CCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccccCcccccCcccceeccc
Confidence 35789999999999999999999999999 467789988 6544333332 111 1112222 379
Q ss_pred cEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|+++.|+.. ..++.+....+ .+.+|.-|..
T Consensus 99 DVlipaA~~-~~i~~~~a~~l--~a~~V~e~AN 128 (217)
T cd05211 99 DIFAPCALG-NVIDLENAKKL--KAKVVAEGAN 128 (217)
T ss_pred cEEeecccc-CccChhhHhhc--CccEEEeCCC
Confidence 999999754 35666556655 4666654443
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=97.83 E-value=2.5e-05 Score=70.38 Aligned_cols=41 Identities=20% Similarity=0.152 Sum_probs=36.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
..|++++|+|++ +||+.+|+.+...|++|+++++++++++.
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~ 92 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKD 92 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHH
Confidence 368999999986 89999999999999999999999887643
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=6.3e-05 Score=68.03 Aligned_cols=40 Identities=28% Similarity=0.241 Sum_probs=35.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.+++++|+|++ .||+.+++.+...|++|+++++++.++.
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~ 46 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLE 46 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 578999999985 9999999999999999999999877653
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.1e-05 Score=63.85 Aligned_cols=42 Identities=26% Similarity=0.435 Sum_probs=38.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.|+.|+|+|+| +||+.+.+.|...|++|+.+-++++.+..
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~s 46 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLS 46 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHH
Confidence 4789999999999 89999999999999999999999887644
|
|
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.82 E-value=9.4e-05 Score=67.24 Aligned_cols=91 Identities=14% Similarity=0.202 Sum_probs=70.8
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEccC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~G 128 (243)
.+|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|.+ +++ ..+ .. .+.|++++++|
T Consensus 186 ~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg 265 (367)
T cd08263 186 RPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALG 265 (367)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCC
Confidence 5789999999999999999999999997 88888888877666666653 222 111 11 35899999998
Q ss_pred ChhcccHHHHccCCCCeEEEEecCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
....+. +.++.++++|+++..|..
T Consensus 266 ~~~~~~-~~~~~l~~~G~~v~~g~~ 289 (367)
T cd08263 266 KPETFK-LALDVVRDGGRAVVVGLA 289 (367)
T ss_pred CHHHHH-HHHHHHhcCCEEEEEccC
Confidence 764454 578999999999998854
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0001 Score=64.11 Aligned_cols=40 Identities=35% Similarity=0.439 Sum_probs=35.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.|++++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~ 43 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAK 43 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 568999999985 8999999999999999999999887653
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=5.8e-05 Score=64.81 Aligned_cols=40 Identities=25% Similarity=0.312 Sum_probs=35.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++++++|+|++ .||+.+++.+...|++|+++++++.++.
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~ 44 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELD 44 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 8999999999999999999999877653
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00012 Score=64.62 Aligned_cols=91 Identities=14% Similarity=0.109 Sum_probs=71.5
Q ss_pred ccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEccC
Q 037949 62 IAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~G 128 (243)
.+|++++|.| .|.+|..+++.++.+|++|++++.++.+...+...|.+ +++ ..+. . ++.|++++++|
T Consensus 141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 220 (324)
T cd08244 141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVG 220 (324)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCC
Confidence 5789999999 58999999999999999999999888887666666653 221 1111 1 35899999998
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.. ...++.++++|+++.+|..+
T Consensus 221 ~~~~--~~~~~~l~~~g~~v~~g~~~ 244 (324)
T cd08244 221 GAIG--RAALALLAPGGRFLTYGWAS 244 (324)
T ss_pred hHhH--HHHHHHhccCcEEEEEecCC
Confidence 8753 35799999999999998753
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00011 Score=77.87 Aligned_cols=92 Identities=15% Similarity=0.083 Sum_probs=73.1
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhccc------H
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIM------V 135 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~------~ 135 (243)
..++|.+||.|.+|..+|..|...|.+|+++|+++.+.......|.. +.++.++++.+|+|+.|..++..+. .
T Consensus 323 ~~~~IGfIGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~ 402 (1378)
T PLN02858 323 PVKRIGFIGLGAMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDL 402 (1378)
T ss_pred CCCeEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchh
Confidence 34789999999999999999999999999999999887665666654 4467788889999999987654322 1
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
..+..+++|.++++.+...
T Consensus 403 g~~~~l~~g~ivVd~STvs 421 (1378)
T PLN02858 403 GAVSALPAGASIVLSSTVS 421 (1378)
T ss_pred hHHhcCCCCCEEEECCCCC
Confidence 2356678899999987653
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=7.8e-05 Score=64.02 Aligned_cols=39 Identities=26% Similarity=0.338 Sum_probs=34.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++..
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 3679999999986 89999999999999999999988653
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00012 Score=64.67 Aligned_cols=83 Identities=19% Similarity=0.236 Sum_probs=58.2
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH-----------hhcCC-------------c-ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA-----------LTEGI-------------P-VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a-----------~~~G~-------------~-~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++.+++.+ .+.|. . ..+. +.+.+
T Consensus 4 ~kI~VIG~G~mG~~ia~~la~~g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~~ 82 (282)
T PRK05808 4 QKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDL-DDLKD 82 (282)
T ss_pred cEEEEEccCHHHHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCH-HHhcc
Confidence 579999999999999999999999999999999876432 22331 1 1122 34678
Q ss_pred CcEEEEccCCh-----hcccHHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTENA-----DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vvn 149 (243)
+|+|++|+... .++. +.-..++++.+++.
T Consensus 83 aDlVi~av~e~~~~k~~~~~-~l~~~~~~~~il~s 116 (282)
T PRK05808 83 ADLVIEAATENMDLKKKIFA-QLDEIAKPEAILAT 116 (282)
T ss_pred CCeeeecccccHHHHHHHHH-HHHhhCCCCcEEEE
Confidence 99999997431 2232 23345677887753
|
|
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00011 Score=65.19 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=71.0
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~ 127 (243)
..+|++++|.| .|.+|+.+++.++.+|++|+.++.++.+...+...|++ +++ ..+. . .+.|++++|+
T Consensus 138 ~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 217 (327)
T PRK10754 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSV 217 (327)
T ss_pred CCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECC
Confidence 35799999996 68999999999999999999998888887777667753 221 1111 1 2589999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|... +. +.++.++++|+++.+|...
T Consensus 218 ~~~~-~~-~~~~~l~~~g~~v~~g~~~ 242 (327)
T PRK10754 218 GKDT-WE-ASLDCLQRRGLMVSFGNAS 242 (327)
T ss_pred cHHH-HH-HHHHHhccCCEEEEEccCC
Confidence 8743 43 4789999999999998653
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00011 Score=63.91 Aligned_cols=39 Identities=26% Similarity=0.291 Sum_probs=34.7
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++++++|+|+ |.||+.+++.+...|++|+++++++.++.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~ 41 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKME 41 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4789999997 59999999999999999999999887653
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=8.9e-05 Score=66.35 Aligned_cols=42 Identities=31% Similarity=0.313 Sum_probs=37.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.++|++++|+|++ +||+.+|+.|...|++|+++.+++.+...
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~ 53 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEA 53 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4689999999987 89999999999999999999998876543
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=3.5e-05 Score=66.96 Aligned_cols=35 Identities=31% Similarity=0.313 Sum_probs=30.8
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCC
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
++||+++|+|+ ++||+++|+.+...|++|+++++.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG 41 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc
Confidence 57899999995 489999999999999999987643
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00014 Score=67.45 Aligned_cols=88 Identities=13% Similarity=0.127 Sum_probs=61.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----------------cCCcc---cCHHhhhcCCcEEEEc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----------------EGIPV---LTREDVVSEAGLFVTT 126 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----------------~G~~~---~~~~~~~~~aDvvi~a 126 (243)
+|.|+|.|-+|+.+|..++ .|.+|+++|+++.+.+.... .+... .+..+++.++|+++.|
T Consensus 2 kI~VIGlGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii~ 80 (388)
T PRK15057 2 KITISGTGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIA 80 (388)
T ss_pred EEEEECCCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEEe
Confidence 5899999999999998776 59999999999998754432 11111 1234556789999999
Q ss_pred cCCh----------hcccH--HHHccCCCCeEEEEecCCC
Q 037949 127 TENA----------DIIMV--RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~----------~~i~~--~~l~~l~~g~~vvnvg~~~ 154 (243)
++++ ..+.. +.+..++++.+||+-+..+
T Consensus 81 Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~ 120 (388)
T PRK15057 81 TPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVP 120 (388)
T ss_pred CCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecC
Confidence 8765 11111 1233368888888776543
|
|
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00012 Score=65.41 Aligned_cols=93 Identities=15% Similarity=0.246 Sum_probs=71.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~ 127 (243)
..+|++|+|.|+|.+|..+++.++.+|+ +|++++.++.+...+...|++ +++ ..+. . .+.|++++++
T Consensus 165 ~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~~~d~vld~~ 244 (347)
T cd05278 165 IKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAV 244 (347)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCCCCCcEEEEcc
Confidence 3579999999999999999999999997 888888888776666666653 222 1121 1 3589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|....+. +.++.++++|+++..|...
T Consensus 245 g~~~~~~-~~~~~l~~~G~~v~~g~~~ 270 (347)
T cd05278 245 GFEETFE-QAVKVVRPGGTIANVGVYG 270 (347)
T ss_pred CCHHHHH-HHHHHhhcCCEEEEEcCCC
Confidence 8755554 5789999999999998653
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0001 Score=63.21 Aligned_cols=39 Identities=28% Similarity=0.325 Sum_probs=35.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+++++++|+|++ .||+.+|+.+...|++|+++++++...
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~ 42 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERL 42 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 578999999986 999999999999999999999987654
|
|
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00021 Score=63.87 Aligned_cols=100 Identities=14% Similarity=0.153 Sum_probs=69.9
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCc----hhHHHHhhcCCc-ccC--------HHhh
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDL----ICALQALTEGIP-VLT--------REDV 116 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~----~r~~~a~~~G~~-~~~--------~~~~ 116 (243)
++++.+... ..+|++|+|.|+ |++|+.+++.++..|++|+++..++ ++...+...|++ +++ ..+.
T Consensus 135 ~~~l~~~~~-~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 213 (341)
T cd08290 135 YRLLEDFVK-LQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATEL 213 (341)
T ss_pred HHHHHhhcc-cCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHH
Confidence 445433222 357999999997 8999999999999999987765443 444555556763 221 1111
Q ss_pred h----c-CCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 117 V----S-EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 117 ~----~-~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+ . +.|++++|+|..... +.++.++++|+++.+|..
T Consensus 214 i~~~~~~~~d~vld~~g~~~~~--~~~~~l~~~G~~v~~g~~ 253 (341)
T cd08290 214 LKSAPGGRPKLALNCVGGKSAT--ELARLLSPGGTMVTYGGM 253 (341)
T ss_pred HHHHcCCCceEEEECcCcHhHH--HHHHHhCCCCEEEEEecc
Confidence 1 1 489999999986533 468889999999999854
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00015 Score=64.94 Aligned_cols=101 Identities=21% Similarity=0.212 Sum_probs=73.7
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh---hh--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED---VV-- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~---~~-- 117 (243)
.|+++... . ..+|++++|.|.|.+|..+++.++.+|++ |++++.++.+.......|.. +++ ..+ ..
T Consensus 148 a~~~l~~~-~-~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 225 (343)
T cd08236 148 ALHAVRLA-G-ITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEG 225 (343)
T ss_pred HHHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCC
Confidence 34555432 2 35789999999999999999999999997 99998877766555555642 221 111 12
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|....+. ..++.++++|+++.+|..
T Consensus 226 ~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 260 (343)
T cd08236 226 RGADLVIEAAGSPATIE-QALALARPGGKVVLVGIP 260 (343)
T ss_pred CCCCEEEECCCCHHHHH-HHHHHhhcCCEEEEEccc
Confidence 24899999988765554 578999999999999855
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00019 Score=63.48 Aligned_cols=91 Identities=10% Similarity=0.006 Sum_probs=69.6
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC------HHhh----h--cCCcEEEEc
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT------REDV----V--SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~------~~~~----~--~~aDvvi~a 126 (243)
..+|++++|.| .|.+|+.+++.++..|++++++..++.+...+...|.+ +++ ..+. . .+.|+++++
T Consensus 138 ~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 217 (334)
T PTZ00354 138 VKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDC 217 (334)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEEC
Confidence 35789999999 47999999999999999988888888887777666763 221 1111 1 358999999
Q ss_pred cCChhcccHHHHccCCCCeEEEEecCC
Q 037949 127 TENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+|.. .+. ..+..++++|.++++|..
T Consensus 218 ~~~~-~~~-~~~~~l~~~g~~i~~~~~ 242 (334)
T PTZ00354 218 VGGS-YLS-ETAEVLAVDGKWIVYGFM 242 (334)
T ss_pred CchH-HHH-HHHHHhccCCeEEEEecC
Confidence 8754 343 478889999999998854
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00023 Score=63.19 Aligned_cols=100 Identities=14% Similarity=0.127 Sum_probs=73.7
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----c
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV-----S 118 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~-----~ 118 (243)
|+++.+... ..+|++++|.|+ |.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+.+ .
T Consensus 128 ~~~l~~~~~-~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 206 (329)
T cd08250 128 SIALEEVGE-MKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPK 206 (329)
T ss_pred HHHHHHhcC-CCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCC
Confidence 455443222 457999999995 7999999999999999999988888777666666653 221 11111 3
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+.|++++++|.. .+. ..++.++++|+++++|..
T Consensus 207 ~vd~v~~~~g~~-~~~-~~~~~l~~~g~~v~~g~~ 239 (329)
T cd08250 207 GVDVVYESVGGE-MFD-TCVDNLALKGRLIVIGFI 239 (329)
T ss_pred CCeEEEECCcHH-HHH-HHHHHhccCCeEEEEecc
Confidence 589999999864 343 578999999999999864
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00014 Score=62.71 Aligned_cols=41 Identities=27% Similarity=0.302 Sum_probs=35.9
Q ss_pred cccCcEEEEEcC-C-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGH-G-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~-G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.+++++|+|+ | +||+.+++.+...|++|+++++++.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~ 56 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLG 56 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 357899999997 6 7999999999999999999998876553
|
|
| >PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00014 Score=72.46 Aligned_cols=89 Identities=21% Similarity=0.224 Sum_probs=66.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC--CEEEEEeCCchhHHHHhhcCCc---ccCHHhhhcCCcEEEEccCChhc---ccHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG--ARVMGTEIDLICALQALTEGIP---VLTREDVVSEAGLFVTTTENADI---IMVR 136 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G--a~V~v~d~~~~r~~~a~~~G~~---~~~~~~~~~~aDvvi~a~G~~~~---i~~~ 136 (243)
++++|+|+|.||..+++.++..| .+|+++|+++.++..+...|+. ..+..+.+.++|+|+.|++.... +. +
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~-~ 82 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLAMEKVLA-D 82 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHHHHHHHH-H
Confidence 78999999999999999999999 4899999999887777777753 23456667899999999875432 21 2
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
.-..++++.++++++...
T Consensus 83 l~~~~~~~~ii~d~~svk 100 (735)
T PRK14806 83 LKPLLSEHAIVTDVGSTK 100 (735)
T ss_pred HHHhcCCCcEEEEcCCCc
Confidence 223456777887777543
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=3e-05 Score=66.53 Aligned_cols=34 Identities=32% Similarity=0.349 Sum_probs=30.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
+.||+++|+|++ .||+.+++.+...|++|++.+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~ 36 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYG 36 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 468999999977 8999999999999999988753
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00025 Score=61.72 Aligned_cols=92 Identities=17% Similarity=0.184 Sum_probs=71.5
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++|+|.| .|++|+.+++.++.+|++|++++.++.+...+...|.+ +.+ ..+ .. .+.|++++|+
T Consensus 134 ~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 213 (320)
T cd05286 134 VKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGV 213 (320)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECC
Confidence 35799999999 58999999999999999999998888887777666753 221 111 11 2589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|.. .++ ..++.++++|+++.+|..+
T Consensus 214 ~~~-~~~-~~~~~l~~~g~~v~~g~~~ 238 (320)
T cd05286 214 GKD-TFE-GSLDSLRPRGTLVSFGNAS 238 (320)
T ss_pred CcH-hHH-HHHHhhccCcEEEEEecCC
Confidence 874 444 5789999999999998654
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00029 Score=61.96 Aligned_cols=96 Identities=17% Similarity=0.187 Sum_probs=70.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC----CEEEEEeCCchhHH-HHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccHHHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG----ARVMGTEIDLICAL-QALTEGIP-VLTREDVVSEAGLFVTTTENADIIMVRHM 138 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G----a~V~v~d~~~~r~~-~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~~~l 138 (243)
.++.+||+|.+|.+++.-+...| .+|++++++++++. .+...|.. +.+..+....+|+||.|+- |..+. +.+
T Consensus 2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~~~~~~~~~~~~advv~LavK-Pq~~~-~vl 79 (266)
T COG0345 2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVVTTTDNQEAVEEADVVFLAVK-PQDLE-EVL 79 (266)
T ss_pred ceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcCCcccCcHHHHHhhCCEEEEEeC-hHhHH-HHH
Confidence 47999999999999999999999 48999999998874 55566665 3445677788999999963 33332 456
Q ss_pred ccCC---CCeEEEEecCCCCCCChhHHHHh
Q 037949 139 KQMK---NAAIVCNIGHFDNEIDMLDLEAY 165 (243)
Q Consensus 139 ~~l~---~g~~vvnvg~~~~~id~~~l~~~ 165 (243)
..++ ++.+|+++.-+ +....+..+
T Consensus 80 ~~l~~~~~~~lvISiaAG---v~~~~l~~~ 106 (266)
T COG0345 80 SKLKPLTKDKLVISIAAG---VSIETLERL 106 (266)
T ss_pred HHhhcccCCCEEEEEeCC---CCHHHHHHH
Confidence 6665 57788876654 455555543
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00018 Score=67.27 Aligned_cols=88 Identities=17% Similarity=0.186 Sum_probs=63.2
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-ccc--CHHhh---------------hcCCcEEEEc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-PVL--TREDV---------------VSEAGLFVTT 126 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~~~--~~~~~---------------~~~aDvvi~a 126 (243)
++|.|+|.|.+|..+|..|+..|.+|+++|+++.+.+. ...|. +.. .+++. .+++|++|.|
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~-l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDT-INRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCCEEEEEeCCHHHHHH-HHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 67999999999999999999999999999999998653 33332 111 11111 2379999999
Q ss_pred cCCh---------hccc---HHHHccCCCCeEEEEecCC
Q 037949 127 TENA---------DIIM---VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 127 ~G~~---------~~i~---~~~l~~l~~g~~vvnvg~~ 153 (243)
++++ ..+. ......+++|.+|+..+..
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv 121 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTS 121 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCC
Confidence 8875 2221 1234567889999887654
|
|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00013 Score=69.49 Aligned_cols=90 Identities=11% Similarity=-0.008 Sum_probs=68.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc----CCc----ccCHHhhhcC---CcEEEEccCChhcc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE----GIP----VLTREDVVSE---AGLFVTTTENADII 133 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~----G~~----~~~~~~~~~~---aDvvi~a~G~~~~i 133 (243)
.+|.+||.|.+|..+|+.+...|.+|+|+|+++.+.+..... |.. ..++.+++.. +|+|+.|..+...+
T Consensus 7 ~~IG~IGLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV 86 (493)
T PLN02350 7 SRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPV 86 (493)
T ss_pred CCEEEEeeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHH
Confidence 369999999999999999999999999999999886544332 532 2356676654 99999997654433
Q ss_pred c---HHHHccCCCCeEEEEecCCC
Q 037949 134 M---VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 134 ~---~~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ...+..+++|.++|+.|-..
T Consensus 87 ~~Vi~gl~~~l~~G~iiID~sT~~ 110 (493)
T PLN02350 87 DQTIKALSEYMEPGDCIIDGGNEW 110 (493)
T ss_pred HHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 23567788999999987653
|
|
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00019 Score=63.93 Aligned_cols=99 Identities=22% Similarity=0.292 Sum_probs=72.5
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC---HHhhh---cCCcE
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT---REDVV---SEAGL 122 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~---~~~~~---~~aDv 122 (243)
++++.+. . ..++++++|.|+ |.+|+.+++.++..|++|++++.++++...+... ++ +.+ ..+.+ .+.|+
T Consensus 152 ~~~~~~~-~-~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~d~ 228 (334)
T PRK13771 152 YRGLRRA-G-VKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKKIGGADI 228 (334)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCchhHHHHHHhcCCCcE
Confidence 4555433 2 357999999999 7999999999999999999998888776555433 21 111 11111 25899
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+++|+|... +. +.++.++++|+++..|...
T Consensus 229 ~ld~~g~~~-~~-~~~~~l~~~G~~v~~g~~~ 258 (334)
T PRK13771 229 VIETVGTPT-LE-ESLRSLNMGGKIIQIGNVD 258 (334)
T ss_pred EEEcCChHH-HH-HHHHHHhcCCEEEEEeccC
Confidence 999998754 43 5789999999999998753
|
|
| >PRK14031 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0002 Score=67.28 Aligned_cols=93 Identities=15% Similarity=0.220 Sum_probs=60.9
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEE-Ee----------CCchhHH---HHhh------------cCCcccC
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMG-TE----------IDLICAL---QALT------------EGIPVLT 112 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v-~d----------~~~~r~~---~a~~------------~G~~~~~ 112 (243)
+..+.|++|+|.|+|++|...|+.|..+|++|++ +| ++...+. .... .++..++
T Consensus 223 g~~l~g~rVaVQGfGNVG~~aA~~L~e~GAkVVaVSD~~G~iy~~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~ga~~i~ 302 (444)
T PRK14031 223 GTDLKGKVCLVSGSGNVAQYTAEKVLELGGKVVTMSDSDGYIYDPDGIDREKLDYIMELKNLYRGRIREYAEKYGCKYVE 302 (444)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHHHhhcCCchhhhHhhcCCEEcC
Confidence 4468999999999999999999999999999876 77 5554331 0000 0222223
Q ss_pred HHhhh-cCCcEEEEccCChhcccHHHHccCCC-CeEEEEecC
Q 037949 113 REDVV-SEAGLFVTTTENADIIMVRHMKQMKN-AAIVCNIGH 152 (243)
Q Consensus 113 ~~~~~-~~aDvvi~a~G~~~~i~~~~l~~l~~-g~~vvnvg~ 152 (243)
.++.+ ..|||++.|.- ...|+.+..+.++. ++.+|.-|-
T Consensus 303 ~d~~~~~~cDIliPaAl-~n~I~~~na~~l~a~g~~~V~EgA 343 (444)
T PRK14031 303 GARPWGEKGDIALPSAT-QNELNGDDARQLVANGVIAVSEGA 343 (444)
T ss_pred CcccccCCCcEEeeccc-ccccCHHHHHHHHhcCCeEEECCC
Confidence 33332 47999999853 35566666666644 444454343
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=3.5e-05 Score=68.70 Aligned_cols=37 Identities=32% Similarity=0.515 Sum_probs=33.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.|++++|+|++ .||+.+|+.|...|++|++.|+++
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~ 46 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVAS 46 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCc
Confidence 5789999999987 899999999999999999998754
|
|
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00018 Score=64.35 Aligned_cols=93 Identities=23% Similarity=0.244 Sum_probs=71.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~G 128 (243)
..+|++++|.|+|.+|..+++.++.+|++|+++..++++.......|.+ +++ ..+. . .+.|+++++.|
T Consensus 157 l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g 236 (337)
T cd08261 157 VTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATG 236 (337)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCC
Confidence 3579999999999999999999999999999988887776555555643 221 1121 1 24899999988
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
....+. ..++.++++|.++..|..+
T Consensus 237 ~~~~~~-~~~~~l~~~G~~i~~g~~~ 261 (337)
T cd08261 237 NPASME-EAVELVAHGGRVVLVGLSK 261 (337)
T ss_pred CHHHHH-HHHHHHhcCCEEEEEcCCC
Confidence 765554 4788899999999988654
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00015 Score=64.65 Aligned_cols=137 Identities=15% Similarity=0.116 Sum_probs=80.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhc-CC-cEEEEccCCh---hcccH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVS-EA-GLFVTTTENA---DIIMV 135 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~-~a-Dvvi~a~G~~---~~i~~ 135 (243)
..|+=++|+|++ +||++-|.-|+.+|.+|+++-+++++++.-.++ .++.-+ +. -+++|++... +.+.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kE------I~~~~~vev~~i~~Dft~~~~~ye~i~- 119 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKE------IEEKYKVEVRIIAIDFTKGDEVYEKLL- 119 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH------HHHHhCcEEEEEEEecCCCchhHHHHH-
Confidence 356899999999 899999999999999999999999998543321 111111 12 2345665333 2243
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHHhhc--CeEEEeecCeeeeEccCchhhH-Hhhh--cCCeecccCCCCCccc
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRG--IKRITIKPQTDPWVFPQTRRGI-IILA--ERLLMNLGCPTGHPSF 209 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~~~~--~~~~~i~~~~~~~~~~~~~~ai-~ll~--~G~ivNl~s~~g~p~~ 209 (243)
+.+..+.-|..|+|+|....- +..-+.. ++ ++ ..++.|......-..- .+ .+++ .|-|+|++|++|.-..
T Consensus 120 ~~l~~~~VgILVNNvG~~~~~-P~~f~~~-~~~~~~-~ii~vN~~~~~~~t~~-ilp~M~~r~~G~IvnigS~ag~~p~ 194 (312)
T KOG1014|consen 120 EKLAGLDVGILVNNVGMSYDY-PESFLKY-PEGELQ-NIINVNILSVTLLTQL-ILPGMVERKKGIIVNIGSFAGLIPT 194 (312)
T ss_pred HHhcCCceEEEEecccccCCC-cHHHHhC-chhhhh-heeEEecchHHHHHHH-hhhhhhcCCCceEEEeccccccccC
Confidence 457777888889999987411 1111111 10 11 1122333221111111 23 3443 4999999998765443
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00018 Score=54.57 Aligned_cols=64 Identities=28% Similarity=0.316 Sum_probs=50.2
Q ss_pred EEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-----CH---Hh-hhcCCcEEEEccCCh
Q 037949 67 AVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-----TR---ED-VVSEAGLFVTTTENA 130 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-----~~---~~-~~~~aDvvi~a~G~~ 130 (243)
++|+|+|.+|+.+++.|+..+.+|+++|.++.+...+...|+.++ +. .+ -+..+|.++.++++.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d 73 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDDD 73 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccCCH
Confidence 689999999999999999977799999999998888888886542 11 11 246788888887764
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00021 Score=63.91 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=73.4
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED----VV-- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~-- 117 (243)
++++... . ..+|++|+|.|.|.+|..+++.++..|++ |++++.++.+...+...|.+ +++ ..+ ..
T Consensus 155 ~~~l~~~-~-~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~ 232 (343)
T cd08235 155 INAQRKA-G-IKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDG 232 (343)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCC
Confidence 4555333 2 46899999999999999999999999998 88888888776665555653 221 111 12
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|....+. ..++.++++++++..|..
T Consensus 233 ~~vd~vld~~~~~~~~~-~~~~~l~~~g~~v~~~~~ 267 (343)
T cd08235 233 RGADVVIVATGSPEAQA-QALELVRKGGRILFFGGL 267 (343)
T ss_pred cCCCEEEECCCChHHHH-HHHHHhhcCCEEEEEecc
Confidence 24899999988665554 468889999999988754
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00034 Score=60.96 Aligned_cols=97 Identities=19% Similarity=0.200 Sum_probs=75.1
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC--HHhh-------h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT--REDV-------V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~--~~~~-------~--~~aDvvi~a~ 127 (243)
..+|.+|+|-- +|++|+.+.|++++.|++++.+-...++.+.|.+.|++ .++ -+|. . ++.|++++..
T Consensus 144 vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsv 223 (336)
T KOG1197|consen 144 VKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSV 223 (336)
T ss_pred CCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccc
Confidence 46899999976 67999999999999999999887778888888899985 222 1221 1 5899999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCCCCCCh
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFDNEIDM 159 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~ 159 (243)
|... +. ..+..+|+.|.+|..|-....+|.
T Consensus 224 G~dt-~~-~sl~~Lk~~G~mVSfG~asgl~~p 253 (336)
T KOG1197|consen 224 GKDT-FA-KSLAALKPMGKMVSFGNASGLIDP 253 (336)
T ss_pred cchh-hH-HHHHHhccCceEEEeccccCCCCC
Confidence 8754 33 368889999999998876533333
|
|
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00042 Score=62.82 Aligned_cols=98 Identities=26% Similarity=0.193 Sum_probs=70.0
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHhh-----cCCcc---cCHHhhhcCCcEEEEccCChh-
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQALT-----EGIPV---LTREDVVSEAGLFVTTTENAD- 131 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~~-----~G~~~---~~~~~~~~~aDvvi~a~G~~~- 131 (243)
..++++|+|+|.+|+..+..+.. .+. +|.++++++++.+.... .|..+ .++++++.++|+|+.||.+..
T Consensus 131 ~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~~p 210 (330)
T PRK08291 131 DASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSEEP 210 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCCCc
Confidence 45899999999999998888875 665 79999999887544322 24432 346777889999999987654
Q ss_pred cccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
++.. +.+++|..+..+|... .++|.+.+.
T Consensus 211 ~i~~---~~l~~g~~v~~vg~d~~~~rEld~~~l~ 242 (330)
T PRK08291 211 ILKA---EWLHPGLHVTAMGSDAEHKNEIAPAVFA 242 (330)
T ss_pred EecH---HHcCCCceEEeeCCCCCCcccCCHHHHh
Confidence 4543 3468888888877642 456655443
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00038 Score=61.52 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=72.9
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH---Hhh---hcCCcE
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR---EDV---VSEAGL 122 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~---~~~---~~~aDv 122 (243)
|+++.. .. ..+|++++|.|+ |++|+.+++.++..|++|+++..++.+.......|.+ +.+. .+. ..+.|+
T Consensus 152 ~~~l~~-~~-~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 229 (332)
T cd08259 152 VHALKR-AG-VKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLGGADV 229 (332)
T ss_pred HHHHHH-hC-CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHHHHHHHHhccCCCE
Confidence 455443 22 357899999997 7999999999999999999888887776555555542 2222 121 136899
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+++++|... + ...++.+++++.++.+|...
T Consensus 230 v~~~~g~~~-~-~~~~~~~~~~g~~v~~g~~~ 259 (332)
T cd08259 230 VIELVGSPT-I-EESLRSLNKGGRLVLIGNVT 259 (332)
T ss_pred EEECCChHH-H-HHHHHHhhcCCEEEEEcCCC
Confidence 999998765 3 34688889999999988653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >KOG0409 consensus Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00013 Score=64.76 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=62.6
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADII 133 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i 133 (243)
..+++..||.|.+|..++..|...|.+|+|+|++..++......|.++ .++.|+.+.+|++|.+.+++...
T Consensus 34 s~~~iGFIGLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~~v 105 (327)
T KOG0409|consen 34 SKTRIGFIGLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPKDV 105 (327)
T ss_pred ccceeeEEeeccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChHhh
Confidence 468999999999999999999999999999999998877777788875 46889999999999998876543
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00012 Score=63.06 Aligned_cols=38 Identities=26% Similarity=0.395 Sum_probs=34.1
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++|++++|+|++ .||+.+|+.|...|++|++.++++.
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~ 43 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD 43 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3679999999977 9999999999999999999998754
|
|
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0002 Score=63.50 Aligned_cols=90 Identities=23% Similarity=0.273 Sum_probs=64.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCC--chhHHHHhhcCCc--c-cCH-HhhhcCCcEEEEccCCh---hccc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEID--LICALQALTEGIP--V-LTR-EDVVSEAGLFVTTTENA---DIIM 134 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~--~~r~~~a~~~G~~--~-~~~-~~~~~~aDvvi~a~G~~---~~i~ 134 (243)
-++|+|+|.|-||..+|+.++..|..|.+++.+ ...+..+...|.. . .+. .+....+|+||-|+.-. .++.
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l~ 82 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVLK 82 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHHH
Confidence 368999999999999999999999987665554 4445455555642 1 222 45566899999997643 3342
Q ss_pred HHHHccCCCCeEEEEecCCC
Q 037949 135 VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.-..+++|++|..+|...
T Consensus 83 -~l~~~l~~g~iv~Dv~S~K 101 (279)
T COG0287 83 -ELAPHLKKGAIVTDVGSVK 101 (279)
T ss_pred -HhcccCCCCCEEEeccccc
Confidence 2333688999999999875
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00019 Score=62.62 Aligned_cols=66 Identities=15% Similarity=0.149 Sum_probs=52.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC---CEEEEEeCCchhHHHHhh-cCCcc-cCHHhhhcCCcEEEEccCCh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG---ARVMGTEIDLICALQALT-EGIPV-LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G---a~V~v~d~~~~r~~~a~~-~G~~~-~~~~~~~~~aDvvi~a~G~~ 130 (243)
.++.|||+|.||..++..+...| .+|.++|+++++...... .|..+ .+..+.+..+|+|+.|+...
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~~ 73 (267)
T PRK11880 3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKPQ 73 (267)
T ss_pred CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCHH
Confidence 46999999999999999999888 689999999887655544 36543 34556677899999997543
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00014 Score=63.77 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=32.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+|+++|+|+|.||+.+|+.+. .|++|+++++++.++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~ 37 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENL 37 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHH
Confidence 578999999999999999996 899999999987654
|
|
| >PRK07589 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00049 Score=62.84 Aligned_cols=97 Identities=19% Similarity=0.182 Sum_probs=70.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh----hcCCc---ccCHHhhhcCCcEEEEccCCh---h
Q 037949 64 GKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL----TEGIP---VLTREDVVSEAGLFVTTTENA---D 131 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~----~~G~~---~~~~~~~~~~aDvvi~a~G~~---~ 131 (243)
-++++|+|+|..++..++.+.. +.. +|.++++++++.+... ..+++ +.+.++++.++|+|+.||.+. +
T Consensus 129 a~~l~iiGaG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~~P 208 (346)
T PRK07589 129 SRTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTNAT 208 (346)
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCCCc
Confidence 4899999999999887766554 455 7999999998754322 12443 245788899999999998654 4
Q ss_pred cccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
++.. +++++|..|+.+|... .|+|.+.+.
T Consensus 209 vl~~---~~lkpG~hV~aIGs~~p~~~Eld~~~l~ 240 (346)
T PRK07589 209 ILTD---DMVEPGMHINAVGGDCPGKTELHPDILR 240 (346)
T ss_pred eecH---HHcCCCcEEEecCCCCCCcccCCHHHHh
Confidence 4543 4679999999999763 566655443
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00014 Score=72.08 Aligned_cols=42 Identities=36% Similarity=0.493 Sum_probs=37.1
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.++|++++|+|+ |+||+.+++.+...|++|+++|+++.++..
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~ 461 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEA 461 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHH
Confidence 357899999995 799999999999999999999999876543
|
|
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00038 Score=61.56 Aligned_cols=92 Identities=20% Similarity=0.193 Sum_probs=71.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC------HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT------REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~------~~~~----~--~~aDvvi~a~ 127 (243)
..+|++++|.|.|++|+.+++.+++.|++|++++.++.+...+...|.+ +++ ..+. . .++|++++++
T Consensus 158 ~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 237 (336)
T cd08276 158 LKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVG 237 (336)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECC
Confidence 3578999999999999999999999999999999888877666656653 221 1111 1 3689999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|.. .+. ..++.++++|+++.+|..+
T Consensus 238 ~~~-~~~-~~~~~l~~~G~~v~~g~~~ 262 (336)
T cd08276 238 GPG-TLA-QSIKAVAPGGVISLIGFLS 262 (336)
T ss_pred ChH-HHH-HHHHhhcCCCEEEEEccCC
Confidence 754 344 4789999999999998754
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00019 Score=68.27 Aligned_cols=41 Identities=22% Similarity=0.296 Sum_probs=36.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
..||+++|+|++ +||+.+|+.|...|++|+++++++.++..
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~ 308 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKK 308 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 478999999987 89999999999999999999998776543
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00025 Score=61.33 Aligned_cols=40 Identities=23% Similarity=0.303 Sum_probs=35.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++++++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 43 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ 43 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 8999999999999999999999876543
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00014 Score=62.47 Aligned_cols=67 Identities=25% Similarity=0.275 Sum_probs=52.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh--cCCccc-----C---HHhh-hcCCcEEEEccCChh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT--EGIPVL-----T---REDV-VSEAGLFVTTTENAD 131 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~--~G~~~~-----~---~~~~-~~~aDvvi~a~G~~~ 131 (243)
++++|+|+|.+|..+|+.|...|.+|+++|.++.+..+... ....++ + +.++ +.++|+++.++|+..
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 47899999999999999999999999999999998766443 343322 1 2333 568999999998743
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00022 Score=61.78 Aligned_cols=39 Identities=26% Similarity=0.301 Sum_probs=35.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+++++++|+|++ .||..+++.|...|++|+++++++.+.
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~ 47 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQL 47 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 579999999987 799999999999999999999987654
|
|
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00022 Score=64.74 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=71.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++++|.|+|.+|..+++.++.+|++ |++++.++.+...+...|++ +++ ..+ .. .+.|++++++
T Consensus 180 ~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~ 259 (363)
T cd08279 180 VRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAV 259 (363)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcC
Confidence 35789999999999999999999999996 88888888877666556653 221 111 11 3589999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|....+. +.++.++++++++..|..+
T Consensus 260 ~~~~~~~-~~~~~l~~~G~~v~~g~~~ 285 (363)
T cd08279 260 GRAATIR-QALAMTRKGGTAVVVGMGP 285 (363)
T ss_pred CChHHHH-HHHHHhhcCCeEEEEecCC
Confidence 8655554 5788899999999988653
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00023 Score=63.46 Aligned_cols=88 Identities=14% Similarity=0.112 Sum_probs=67.9
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHhC-CCEEEEEeCCchhHHHHhhcCCc-ccC----HHhhh-----cCCcEEEEccCChh
Q 037949 64 GKIAVDCGH-GDVGRGCAAALKAV-GARVMGTEIDLICALQALTEGIP-VLT----REDVV-----SEAGLFVTTTENAD 131 (243)
Q Consensus 64 g~~vlViG~-G~IG~~~A~~l~~~-Ga~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~~-----~~aDvvi~a~G~~~ 131 (243)
|++|+|.|+ |.+|+.+++.++.+ |++|+++..++++...+...|++ +++ ..+.+ .+.|+++++++...
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~ 228 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQ 228 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHH
Confidence 899999996 79999999999998 99999998877777666667763 222 21211 25899999986655
Q ss_pred cccHHHHccCCCCeEEEEecC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.+. ..++.++++|++++.+.
T Consensus 229 ~~~-~~~~~l~~~G~~v~~~~ 248 (336)
T TIGR02817 229 HFK-EIVELLAPQGRFALIDD 248 (336)
T ss_pred HHH-HHHHHhccCCEEEEEcc
Confidence 554 57899999999998753
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00024 Score=62.69 Aligned_cols=89 Identities=13% Similarity=0.086 Sum_probs=61.6
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh--CCCEEE-EEeCCchhHHHH-hhcCC-c-ccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA--VGARVM-GTEIDLICALQA-LTEGI-P-VLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~--~Ga~V~-v~d~~~~r~~~a-~~~G~-~-~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
...+++|+|+|.||..+++.+.. .++++. ++|+++.+.... ...|. . ..+.++.+.++|+|++|+++.... .-
T Consensus 5 ~~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eell~~~D~Vvi~tp~~~h~-e~ 83 (271)
T PRK13302 5 PELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQLATHADIVVEAAPASVLR-AI 83 (271)
T ss_pred CeeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHHhcCCCEEEECCCcHHHH-HH
Confidence 34789999999999999999986 477765 689998775433 23453 2 346778888899999998765322 22
Q ss_pred HHccCCCCeEEEEecC
Q 037949 137 HMKQMKNAAIVCNIGH 152 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~ 152 (243)
....++.|..++....
T Consensus 84 ~~~aL~aGk~Vi~~s~ 99 (271)
T PRK13302 84 VEPVLAAGKKAIVLSV 99 (271)
T ss_pred HHHHHHcCCcEEEecc
Confidence 2444566666665443
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00028 Score=67.15 Aligned_cols=79 Identities=13% Similarity=0.098 Sum_probs=55.9
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcccCHHh--hhcCCcEEEEcc
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPVLTRED--VVSEAGLFVTTT 127 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~~~~~~--~~~~aDvvi~a~ 127 (243)
+.++++. +..+.+++++|+|+|.+|++++..+...|++|+++++++.+...... .+....+..+ .+.++|+|+.|+
T Consensus 320 ~~~l~~~-~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~~~~~~~~~l~~~DiVInat 398 (477)
T PRK09310 320 FSLLKQK-NIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKAFPLESLPELHRIDIIINCL 398 (477)
T ss_pred HHHHHhc-CCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccceechhHhcccCCCCEEEEcC
Confidence 3444332 33568899999999999999999999999999999998876543322 2222232222 246899999997
Q ss_pred CCh
Q 037949 128 ENA 130 (243)
Q Consensus 128 G~~ 130 (243)
...
T Consensus 399 P~g 401 (477)
T PRK09310 399 PPS 401 (477)
T ss_pred CCC
Confidence 543
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0003 Score=59.68 Aligned_cols=36 Identities=22% Similarity=0.098 Sum_probs=32.5
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+|+++|+|++ .||+.+|+.|...|++|+++++++..
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 5799999986 89999999999999999999988754
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00017 Score=62.28 Aligned_cols=39 Identities=28% Similarity=0.348 Sum_probs=34.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+++|+++|+|++ .||+.+++.|...|++|++.++++.+
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 3679999999975 99999999999999999999988754
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00015 Score=62.28 Aligned_cols=40 Identities=28% Similarity=0.382 Sum_probs=35.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.++|++++|+|++ .||+.+++.+...|++|+++++++..+
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~ 48 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATL 48 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHH
Confidence 4689999999986 899999999999999999999987654
|
|
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00026 Score=63.63 Aligned_cols=91 Identities=12% Similarity=0.057 Sum_probs=69.5
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----cCCcEEEEccCC
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV-----SEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~-----~~aDvvi~a~G~ 129 (243)
.+|++++|.|+ |++|+.+++.++.+|++|+.+. ++.+...+...|++ +++ ..+.+ .+.|++++++|.
T Consensus 153 ~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~ 231 (339)
T cd08249 153 SKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCIST 231 (339)
T ss_pred CCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeecc
Confidence 47999999997 7999999999999999988766 55666666666763 221 11211 358999999987
Q ss_pred hhcccHHHHccCCC--CeEEEEecCCC
Q 037949 130 ADIIMVRHMKQMKN--AAIVCNIGHFD 154 (243)
Q Consensus 130 ~~~i~~~~l~~l~~--g~~vvnvg~~~ 154 (243)
+..+. +.++.+++ +|+++.+|...
T Consensus 232 ~~~~~-~~~~~l~~~~~g~~v~~g~~~ 257 (339)
T cd08249 232 PESAQ-LCAEALGRSGGGKLVSLLPVP 257 (339)
T ss_pred chHHH-HHHHHHhccCCCEEEEecCCC
Confidence 55554 57899999 99999988654
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00021 Score=65.88 Aligned_cols=78 Identities=23% Similarity=0.302 Sum_probs=60.6
Q ss_pred cCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh---cccHHHH
Q 037949 63 AGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD---IIMVRHM 138 (243)
Q Consensus 63 ~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~---~i~~~~l 138 (243)
..++++|+| .|.||..+|..++..|.+|+++|+++. .+..+.+.++|+||.|+.... ++. + +
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~------------~~~~~~~~~aDlVilavP~~~~~~~~~-~-l 162 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW------------DRAEDILADAGMVIVSVPIHLTEEVIA-R-L 162 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc------------hhHHHHHhcCCEEEEeCcHHHHHHHHH-H-H
Confidence 358899999 999999999999999999999998642 123456678999999986543 232 2 3
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..++++++|+.+|...
T Consensus 163 ~~l~~~~iv~Dv~SvK 178 (374)
T PRK11199 163 PPLPEDCILVDLTSVK 178 (374)
T ss_pred hCCCCCcEEEECCCcc
Confidence 3378899999988764
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00035 Score=62.58 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=57.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh---cccHHHHc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD---IIMVRHMK 139 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~---~i~~~~l~ 139 (243)
.+.+|.|+|+|.+|..+|+.+...|.+|.++++++. .++.+.++++|+|+.|+.... +++ .+.
T Consensus 3 ~~m~I~iiG~G~~G~~lA~~l~~~G~~V~~~~r~~~------------~~~~~~~~~advvi~~vp~~~~~~v~~--~l~ 68 (308)
T PRK14619 3 QPKTIAILGAGAWGSTLAGLASANGHRVRVWSRRSG------------LSLAAVLADADVIVSAVSMKGVRPVAE--QVQ 68 (308)
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCEEEEEeCCCC------------CCHHHHHhcCCEEEEECChHHHHHHHH--HHH
Confidence 356899999999999999999999999999998763 245566778999999976542 221 232
Q ss_pred --cCCCCeEEEEecC
Q 037949 140 --QMKNAAIVCNIGH 152 (243)
Q Consensus 140 --~l~~g~~vvnvg~ 152 (243)
.++++.++++...
T Consensus 69 ~~~~~~~~ivi~~s~ 83 (308)
T PRK14619 69 ALNLPPETIIVTATK 83 (308)
T ss_pred HhcCCCCcEEEEeCC
Confidence 3567788887654
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00048 Score=59.96 Aligned_cols=91 Identities=18% Similarity=0.206 Sum_probs=69.4
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++|+|.|+ |.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+ .. .+.|++++++
T Consensus 137 ~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (323)
T cd05276 137 LKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMV 216 (323)
T ss_pred CCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECC
Confidence 357899999996 7999999999999999999998888777666555643 211 111 11 3689999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|... +. ..++.+++++.++++|..
T Consensus 217 g~~~-~~-~~~~~~~~~g~~i~~~~~ 240 (323)
T cd05276 217 GGDY-LA-RNLRALAPDGRLVLIGLL 240 (323)
T ss_pred chHH-HH-HHHHhhccCCEEEEEecC
Confidence 8765 33 468888999999998865
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00027 Score=63.28 Aligned_cols=88 Identities=23% Similarity=0.160 Sum_probs=65.5
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh---hcCCcEEEEccCChhc
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV---VSEAGLFVTTTENADI 132 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~---~~~aDvvi~a~G~~~~ 132 (243)
+|++|+|.|+ |++|+.+++.++.+|++|+++..+ .+...+...|.+ +++ ..+. ..+.|++++++|.+ .
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~-~ 239 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGD-T 239 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEECCChH-H
Confidence 4999999995 899999999999999998877644 444455555653 221 1111 14689999999876 4
Q ss_pred ccHHHHccCCCCeEEEEecCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+. ..++.++++|+++++|..
T Consensus 240 ~~-~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 240 EK-WALKLLKKGGTYVTLVSP 259 (350)
T ss_pred HH-HHHHHhccCCEEEEecCC
Confidence 43 579999999999998854
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00019 Score=61.24 Aligned_cols=87 Identities=18% Similarity=0.134 Sum_probs=60.7
Q ss_pred EEEEEcCChHHHHHHHHHHhC--CC-EEEEEeCCchhHHHHhh-cCC-cccCHHhhhcCCcEEEEccCChhcccHHHHcc
Q 037949 66 IAVDCGHGDVGRGCAAALKAV--GA-RVMGTEIDLICALQALT-EGI-PVLTREDVVSEAGLFVTTTENADIIMVRHMKQ 140 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~--Ga-~V~v~d~~~~r~~~a~~-~G~-~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~ 140 (243)
+|+++|||.||..+...++.- .+ -|.++|++.++...+.. .+. .+.++++.+.+.|++++|.+...+ ..-..+.
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s~ide~~~~~DlvVEaAS~~Av-~e~~~~~ 80 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVSDIDELIAEVDLVVEAASPEAV-REYVPKI 80 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCccccHHHHhhccceeeeeCCHHHH-HHHhHHH
Confidence 689999999999999999854 45 47889999987643332 233 245678888999999999765433 2223444
Q ss_pred CCC--CeEEEEecCC
Q 037949 141 MKN--AAIVCNIGHF 153 (243)
Q Consensus 141 l~~--g~~vvnvg~~ 153 (243)
++. +.+|+++|-.
T Consensus 81 L~~g~d~iV~SVGAL 95 (255)
T COG1712 81 LKAGIDVIVMSVGAL 95 (255)
T ss_pred HhcCCCEEEEechhc
Confidence 444 5666666654
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0003 Score=60.43 Aligned_cols=42 Identities=29% Similarity=0.331 Sum_probs=36.5
Q ss_pred cccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 59 DITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 59 ~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+..+.||+++|+|++ .||+.+|+.+...|++|+++++++.+.
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~ 47 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG 47 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence 345789999999975 999999999999999999999887654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00037 Score=60.34 Aligned_cols=41 Identities=27% Similarity=0.339 Sum_probs=36.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.+++++|+|++ .||+.++..+...|++|++.++++.++.
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~ 48 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVD 48 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 4678999999987 8999999999999999999998876553
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00023 Score=65.81 Aligned_cols=87 Identities=11% Similarity=0.062 Sum_probs=60.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcC---Cc--ccC------HHhhhcCCcEEEEccCChhc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEG---IP--VLT------REDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G---~~--~~~------~~~~~~~aDvvi~a~G~~~~ 132 (243)
++++|+|+|.||+.+|..+...| .+|++.|+++.++.++...+ .+ .++ +.+++++.|+||.|.+-...
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 68999999999999999999999 69999999988877765543 22 122 34567888999999543222
Q ss_pred ccHHHH-ccCCCCeEEEEecCC
Q 037949 133 IMVRHM-KQMKNAAIVCNIGHF 153 (243)
Q Consensus 133 i~~~~l-~~l~~g~~vvnvg~~ 153 (243)
. ..+ ..++.|.-++.++..
T Consensus 82 ~--~i~ka~i~~gv~yvDts~~ 101 (389)
T COG1748 82 L--TILKACIKTGVDYVDTSYY 101 (389)
T ss_pred H--HHHHHHHHhCCCEEEcccC
Confidence 1 222 222455555555544
|
|
| >PLN02477 glutamate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00025 Score=66.10 Aligned_cols=91 Identities=18% Similarity=0.279 Sum_probs=61.0
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEE-EEeCC----------chhHHHHhhc--------CCcccCHHhhh-c
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVM-GTEID----------LICALQALTE--------GIPVLTREDVV-S 118 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~-v~d~~----------~~r~~~a~~~--------G~~~~~~~~~~-~ 118 (243)
+..+.|++|+|.|+|++|+.+|+.|...|++|+ |+|.+ ...+...... +.+.++.++.+ .
T Consensus 201 g~~l~g~~VaIqGfGnVG~~~A~~L~e~GakVVaVsD~~G~iy~~~GLD~~~L~~~k~~~g~l~~~~~a~~i~~~e~l~~ 280 (410)
T PLN02477 201 GKSIAGQTFVIQGFGNVGSWAAQLIHEKGGKIVAVSDITGAVKNENGLDIPALRKHVAEGGGLKGFPGGDPIDPDDILVE 280 (410)
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCchhccccceEecCccceec
Confidence 446899999999999999999999999999988 77876 4333222111 11122333332 4
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecC
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.+||++.|. ....|+.+..+.+ .+.+|.-|.
T Consensus 281 ~~DvliP~A-l~~~I~~~na~~i--~ak~I~egA 311 (410)
T PLN02477 281 PCDVLIPAA-LGGVINKENAADV--KAKFIVEAA 311 (410)
T ss_pred cccEEeecc-ccccCCHhHHHHc--CCcEEEeCC
Confidence 799999985 3345777667765 556654443
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00038 Score=56.31 Aligned_cols=86 Identities=16% Similarity=0.144 Sum_probs=57.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC--------Cc-------ccCHHhhhcCCcEEEEccCCh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG--------IP-------VLTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G--------~~-------~~~~~~~~~~aDvvi~a~G~~ 130 (243)
+|.|+|+|..|.++|..+...|.+|.++.+++...+.-...+ .. ..+++++++++|+++.++.+.
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs~ 80 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPSQ 80 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-GG
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccHH
Confidence 589999999999999999999999999999986543322211 11 124667889999999987553
Q ss_pred h---cccHHHHccCCCCeEEEEecC
Q 037949 131 D---IIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 131 ~---~i~~~~l~~l~~g~~vvnvg~ 152 (243)
. .+. +.-..++++..++++.-
T Consensus 81 ~~~~~~~-~l~~~l~~~~~ii~~~K 104 (157)
T PF01210_consen 81 AHREVLE-QLAPYLKKGQIIISATK 104 (157)
T ss_dssp GHHHHHH-HHTTTSHTT-EEEETS-
T ss_pred HHHHHHH-HHhhccCCCCEEEEecC
Confidence 3 332 23444567777777543
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK07680 late competence protein ComER; Validated | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00041 Score=61.00 Aligned_cols=95 Identities=22% Similarity=0.228 Sum_probs=64.3
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC----EEEEEeCCchhHHHHhh-c-CCcc-cCHHhhhcCCcEEEEccCChh---cccH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA----RVMGTEIDLICALQALT-E-GIPV-LTREDVVSEAGLFVTTTENAD---IIMV 135 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga----~V~v~d~~~~r~~~a~~-~-G~~~-~~~~~~~~~aDvvi~a~G~~~---~i~~ 135 (243)
++.|||+|.+|..++..+...|. +|+++++++.+...... . |+.. .+..+.+..+|+|+.|+.... ++.
T Consensus 2 ~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~p~~~~~vl~- 80 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVKPLDIYPLLQ- 80 (273)
T ss_pred EEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecCHHHHHHHHH-
Confidence 58999999999999999998883 79999999877644433 2 5543 355666789999999974322 121
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+....++++.+++.+.-+ ++.+.+..
T Consensus 81 ~l~~~l~~~~~iis~~ag---~~~~~L~~ 106 (273)
T PRK07680 81 KLAPHLTDEHCLVSITSP---ISVEQLET 106 (273)
T ss_pred HHHhhcCCCCEEEEECCC---CCHHHHHH
Confidence 122345667788876643 34444443
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00031 Score=66.79 Aligned_cols=41 Identities=15% Similarity=0.308 Sum_probs=36.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 44 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARE 44 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 468999999987 89999999999999999999998876543
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00023 Score=61.06 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=33.6
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
||+++|+|++ .||+.+++.+...|++|+++++++.++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~ 38 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKL 38 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 5899999987 899999999999999999999987654
|
|
| >COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00069 Score=61.44 Aligned_cols=98 Identities=22% Similarity=0.176 Sum_probs=73.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh----hcC-Cc---ccCHHhhhcCCcEEEEccCCh-hc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL----TEG-IP---VLTREDVVSEAGLFVTTTENA-DI 132 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~----~~G-~~---~~~~~~~~~~aDvvi~a~G~~-~~ 132 (243)
-++++|||+|..+...++.++. ++. +|.+++++++..+... ..+ .+ +.+.++++++||+|+.||.+. ++
T Consensus 130 a~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pi 209 (330)
T COG2423 130 ASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPV 209 (330)
T ss_pred CcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCe
Confidence 5799999999999999888885 556 8999999998754433 222 22 345678899999999998665 45
Q ss_pred ccHHHHccCCCCeEEEEecCC---CCCCChhHHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHF---DNEIDMLDLEA 164 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~---~~~id~~~l~~ 164 (243)
+.. +++++|..|+.+|.. ..|+|.+.+..
T Consensus 210 l~~---~~l~~G~hI~aiGad~p~k~Eld~e~l~r 241 (330)
T COG2423 210 LKA---EWLKPGTHINAIGADAPGKRELDPEVLAR 241 (330)
T ss_pred ecH---hhcCCCcEEEecCCCCcccccCCHHHHHh
Confidence 543 567899999999964 25677766654
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00025 Score=60.90 Aligned_cols=39 Identities=28% Similarity=0.313 Sum_probs=35.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.+|+++|+|++ .||+.+++.|...|++|+++++++.++
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~ 46 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERA 46 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence 579999999976 899999999999999999999987654
|
|
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00065 Score=59.23 Aligned_cols=92 Identities=17% Similarity=0.211 Sum_probs=70.2
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++++|.|+ |++|+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+ .. .+.|++++++
T Consensus 137 ~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~ 216 (323)
T cd08241 137 LQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPV 216 (323)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECc
Confidence 357899999998 8999999999999999999998888777666655642 111 111 11 2589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|.. ..+ ..+..++++|.++++|...
T Consensus 217 g~~-~~~-~~~~~~~~~g~~v~~~~~~ 241 (323)
T cd08241 217 GGD-VFE-ASLRSLAWGGRLLVIGFAS 241 (323)
T ss_pred cHH-HHH-HHHHhhccCCEEEEEccCC
Confidence 874 343 4688899999999988653
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00035 Score=60.08 Aligned_cols=36 Identities=31% Similarity=0.346 Sum_probs=31.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ .||+.+|+.|...|++|++...+.
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA 41 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 578999999975 999999999999999998876544
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0003 Score=61.44 Aligned_cols=39 Identities=26% Similarity=0.323 Sum_probs=34.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.+++++|+|++ .||+.+++.|...|++|+++|+++..+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~ 43 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDAL 43 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence 468999999975 899999999999999999999987654
|
|
| >PRK12862 malic enzyme; Reviewed | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0006 Score=68.18 Aligned_cols=121 Identities=19% Similarity=0.215 Sum_probs=89.1
Q ss_pred hhhccccchhhhhhh---hccccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeCC------------chhHHHH
Q 037949 42 NLYGFRHSLPDGLMR---ATDITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEID------------LICALQA 103 (243)
Q Consensus 42 ~~~~~~~~~~~av~~---~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~------------~~r~~~a 103 (243)
..+|++.....++.. ..+..+...+++|.|+|.-|.++++.+...|+ +++++|.. +.+...|
T Consensus 168 D~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~l~~~~~~~a 247 (763)
T PRK12862 168 DQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAAALACLDLLVSLGVKRENIWVTDIKGVVYEGRTELMDPWKARYA 247 (763)
T ss_pred CcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHHHHHHHHHHHHcCCCcccEEEEcCCCeeeCCCCccccHHHHHHh
Confidence 344555544444432 23445788999999999999999999999999 79999832 2333333
Q ss_pred hhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHh
Q 037949 104 LTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAY 165 (243)
Q Consensus 104 ~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~ 165 (243)
... ...++.++++++|+++-+++ +++++.+.++.|.+..+|.-.+-...|+..+....|
T Consensus 248 ~~~--~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifalsNP~~E~~p~~a~~~ 306 (763)
T PRK12862 248 QKT--DARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALANPTPEILPEEARAV 306 (763)
T ss_pred hhc--ccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCCCCcccCCHHHHHHh
Confidence 332 23468899999999999987 789999999999988888877766567777766554
|
|
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00065 Score=58.12 Aligned_cols=92 Identities=15% Similarity=0.187 Sum_probs=70.8
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC--c-ccC-----HHh----hh--cCCcEEEE
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI--P-VLT-----RED----VV--SEAGLFVT 125 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~--~-~~~-----~~~----~~--~~aDvvi~ 125 (243)
..+|++|+|.| .|.+|+.+++.++.+|++|++++.++.+...+...|. + +++ ..+ .. .+.|++++
T Consensus 102 ~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 181 (288)
T smart00829 102 LRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLN 181 (288)
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEe
Confidence 35799999999 5899999999999999999999988888777766665 2 221 111 11 25899999
Q ss_pred ccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 126 TTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 126 a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++|. ..+. ..++.+++++.++.+|..+
T Consensus 182 ~~~~-~~~~-~~~~~l~~~g~~v~~g~~~ 208 (288)
T smart00829 182 SLAG-EFLD-ASLRCLAPGGRFVEIGKRD 208 (288)
T ss_pred CCCH-HHHH-HHHHhccCCcEEEEEcCcC
Confidence 9885 4444 4788899999999998653
|
Enoylreductase in Polyketide synthases. |
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00027 Score=60.56 Aligned_cols=39 Identities=31% Similarity=0.464 Sum_probs=35.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.+++++|+|++ .||..+++.|...|++|+++++++.+.
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~ 44 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG 44 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 578999999986 899999999999999999999987654
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00045 Score=59.38 Aligned_cols=41 Identities=22% Similarity=0.268 Sum_probs=36.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.+...|++|++++++++.+.
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~ 47 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALA 47 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 3679999999975 9999999999999999999999876543
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00014 Score=62.90 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=32.6
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|+ ++||+.+|+.|...|++|++++++.
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~ 43 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGR 43 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCcc
Confidence 57899999997 5999999999999999999998764
|
|
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00068 Score=59.39 Aligned_cols=101 Identities=21% Similarity=0.184 Sum_probs=68.0
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH--h----hh--cCC
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE--D----VV--SEA 120 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~--~----~~--~~a 120 (243)
++++.+.. ...+|++|+|.|+ |++|+.+++.++..|++|++++.+ .+...+...|.+ +++.. + .. .+.
T Consensus 132 ~~~~~~~~-~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 209 (319)
T cd08267 132 LQALRDAG-KVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRSLGADEVIDYTTEDFVALTAGGEKY 209 (319)
T ss_pred HHHHHHhc-CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcchhccCCCCC
Confidence 44444332 2357999999997 899999999999999999888765 555555556653 22211 1 11 358
Q ss_pred cEEEEccCChh-cccHHHHccCCCCeEEEEecCCC
Q 037949 121 GLFVTTTENAD-IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 121 Dvvi~a~G~~~-~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|++++|+|... ... .....++++|+++.+|..+
T Consensus 210 d~vi~~~~~~~~~~~-~~~~~l~~~g~~i~~g~~~ 243 (319)
T cd08267 210 DVIFDAVGNSPFSLY-RASLALKPGGRYVSVGGGP 243 (319)
T ss_pred cEEEECCCchHHHHH-HhhhccCCCCEEEEecccc
Confidence 99999988432 121 2233489999999998764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00055 Score=58.95 Aligned_cols=40 Identities=25% Similarity=0.261 Sum_probs=35.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.|++++|+|++ +||+.+++.+...|++|+++++++.+..
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALE 45 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 578999999985 8999999999999999999999877543
|
|
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00027 Score=60.64 Aligned_cols=87 Identities=10% Similarity=0.054 Sum_probs=56.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC--CchhHHHHhhcC-Cccc--CH-HhhhcCCcEEEEccCChhcccH
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI--DLICALQALTEG-IPVL--TR-EDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~--~~~r~~~a~~~G-~~~~--~~-~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
++|++|+|+|+|.++..=+..|...||+|+|+-+ +++-...+ ..| +... +. .+.+.++++|+.||..+. ++.
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~-~~~~i~~~~r~~~~~dl~g~~LViaATdD~~-vN~ 100 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK-KYGNLKLIKGNYDKEFIKDKHLIVIATDDEK-LNN 100 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH-hCCCEEEEeCCCChHHhCCCcEEEECCCCHH-HHH
Confidence 5689999999999999989999999999999844 33322112 222 2221 11 234578999999997765 444
Q ss_pred HHHccCCC-CeEEEEe
Q 037949 136 RHMKQMKN-AAIVCNI 150 (243)
Q Consensus 136 ~~l~~l~~-g~~vvnv 150 (243)
......+. +..++++
T Consensus 101 ~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 101 KIRKHCDRLYKLYIDC 116 (223)
T ss_pred HHHHHHHHcCCeEEEc
Confidence 33444444 4445443
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0006 Score=60.17 Aligned_cols=86 Identities=8% Similarity=0.162 Sum_probs=60.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCC----CEEEEEeCCch-hHHHHh-hcCCcc-cCHHhhhcCCcEEEEccCChhc---c
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVG----ARVMGTEIDLI-CALQAL-TEGIPV-LTREDVVSEAGLFVTTTENADI---I 133 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~G----a~V~v~d~~~~-r~~~a~-~~G~~~-~~~~~~~~~aDvvi~a~G~~~~---i 133 (243)
..++.+||+|.+|..++..+...| .+|+++++++. ++.... ..|... .+..+.++.+|+||.|+..... +
T Consensus 3 ~mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~vl 82 (279)
T PRK07679 3 IQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAEAL 82 (279)
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHHHH
Confidence 458999999999999999999988 57999998764 333322 346643 3556677889999999765432 2
Q ss_pred cHHHHccCCCCeEEEEe
Q 037949 134 MVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnv 150 (243)
. +....++++.+++++
T Consensus 83 ~-~l~~~~~~~~liIs~ 98 (279)
T PRK07679 83 I-PFKEYIHNNQLIISL 98 (279)
T ss_pred H-HHHhhcCCCCEEEEE
Confidence 1 223345667788875
|
|
| >PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00045 Score=60.11 Aligned_cols=92 Identities=21% Similarity=0.337 Sum_probs=63.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEE--------eCCchhHHHHh----hcCCcc-------------cCHH-
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGT--------EIDLICALQAL----TEGIPV-------------LTRE- 114 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~--------d~~~~r~~~a~----~~G~~~-------------~~~~- 114 (243)
.+.|++++|-|+|.+|..+|+.|...|++|+.+ |++........ ..|.++ ++.+
T Consensus 29 ~l~g~~v~IqGfG~VG~~~a~~l~~~Ga~vv~vsD~~G~i~~~~Gld~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 108 (244)
T PF00208_consen 29 SLEGKRVAIQGFGNVGSHAARFLAELGAKVVAVSDSSGAIYDPDGLDVEELLRIKEERGSRVDDYPLESPDGAEYIPNDD 108 (244)
T ss_dssp SSTTCEEEEEESSHHHHHHHHHHHHTTEEEEEEEESSEEEEETTEEHHHHHHHHHHHHSSHSTTGTHTCSSTSEEECHHC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCceEEEcCCCchHHHHHHHHHHhCCcccccccccccceeEecccc
Confidence 478999999999999999999999999987665 54443322211 112211 1222
Q ss_pred hhh-cCCcEEEEccCChhcccHHHHc-cCCCCeEEEEecCC
Q 037949 115 DVV-SEAGLFVTTTENADIIMVRHMK-QMKNAAIVCNIGHF 153 (243)
Q Consensus 115 ~~~-~~aDvvi~a~G~~~~i~~~~l~-~l~~g~~vvnvg~~ 153 (243)
+.+ ..+||++.| .....|+.+... .+++++.+|.-|-.
T Consensus 109 ~il~~~~DiliP~-A~~~~I~~~~~~~~i~~~akiIvegAN 148 (244)
T PF00208_consen 109 EILSVDCDILIPC-ALGNVINEDNAPSLIKSGAKIIVEGAN 148 (244)
T ss_dssp HGGTSSSSEEEEE-SSSTSBSCHHHCHCHHTT-SEEEESSS
T ss_pred ccccccccEEEEc-CCCCeeCHHHHHHHHhccCcEEEeCcc
Confidence 343 489999999 455677777788 88888888876654
|
They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C .... |
| >PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00039 Score=65.26 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=64.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-----------------ccCHHhhhcCCcEEEEc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-----------------VLTREDVVSEAGLFVTT 126 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-----------------~~~~~~~~~~aDvvi~a 126 (243)
.-+|.|+|.|.+|+.+|..+.. |.+|+++|+++.+.+... .|.. ..+..+.++++|++|.|
T Consensus 6 ~mkI~vIGlGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~-~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~ 83 (425)
T PRK15182 6 EVKIAIIGLGYVGLPLAVEFGK-SRQVVGFDVNKKRILELK-NGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIIT 83 (425)
T ss_pred CCeEEEECcCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHH-CcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEE
Confidence 3579999999999999999876 799999999999875443 4432 11223456799999999
Q ss_pred cCChh---------ccc---HHHHccCCCCeEEEEecCCC
Q 037949 127 TENAD---------IIM---VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~---------~i~---~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+++. .+. ......+++|.+||+-+...
T Consensus 84 Vptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~ 123 (425)
T PRK15182 84 VPTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVY 123 (425)
T ss_pred cCCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 88761 111 12346678899999877554
|
|
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00093 Score=57.10 Aligned_cols=92 Identities=14% Similarity=0.158 Sum_probs=69.6
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC--Cc-ccC-----HHh----hh--cCCcEEEE
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG--IP-VLT-----RED----VV--SEAGLFVT 125 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G--~~-~~~-----~~~----~~--~~aDvvi~ 125 (243)
..+|++++|.| .|.+|+.+++.++.+|++|++++.++.+...+...| .+ +++ ..+ .. +++|++++
T Consensus 106 ~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 106 LQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLN 185 (293)
T ss_pred cCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEe
Confidence 35899999997 689999999999999999999888777765665555 22 221 111 11 26899999
Q ss_pred ccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 126 TTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 126 a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++|.+ .++ ..++.++++++++.+|..+
T Consensus 186 ~~~~~-~~~-~~~~~l~~~g~~v~~g~~~ 212 (293)
T cd05195 186 SLSGE-LLR-ASWRCLAPFGRFVEIGKRD 212 (293)
T ss_pred CCCch-HHH-HHHHhcccCceEEEeeccc
Confidence 99886 454 5789999999999988654
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00033 Score=62.69 Aligned_cols=39 Identities=26% Similarity=0.201 Sum_probs=34.4
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCC-CEEEEEeCCchhHH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVG-ARVMGTEIDLICAL 101 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~G-a~V~v~d~~~~r~~ 101 (243)
.+++++|+|+. +||+.+|+.+...| ++|+++++++.+..
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~ 42 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAE 42 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 37899999987 89999999999999 89999998877653
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00024 Score=61.01 Aligned_cols=40 Identities=25% Similarity=0.299 Sum_probs=35.7
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.++||+++|+|+ |.||+.+++.+...|++|++.++++.+.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~ 47 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKL 47 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 367999999997 5999999999999999999999987654
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00026 Score=59.04 Aligned_cols=89 Identities=20% Similarity=0.197 Sum_probs=54.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-c---------------------cCHHhhhcCCcE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-V---------------------LTREDVVSEAGL 122 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~---------------------~~~~~~~~~aDv 122 (243)
.+|.|+|.|-+|+.+|..+...|.+|+.+|+|+.+.+. ...|.. . .+..++++.+|+
T Consensus 1 M~I~ViGlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~-l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIGLGYVGLPLAAALAEKGHQVIGVDIDEEKVEA-LNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE--STTHHHHHHHHHHTTSEEEEE-S-HHHHHH-HHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEECCCcchHHHHHHHHhCCCEEEEEeCChHHHHH-Hhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 37899999999999999999999999999999997643 333421 1 112334568999
Q ss_pred EEEccCChhc---------cc---HHHHccCCCCeEEEEecCCC
Q 037949 123 FVTTTENADI---------IM---VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 123 vi~a~G~~~~---------i~---~~~l~~l~~g~~vvnvg~~~ 154 (243)
+|-|++++.- +. ...-..++++.+|++-+-.+
T Consensus 80 ~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~l~~~~lvV~~STvp 123 (185)
T PF03721_consen 80 VFICVPTPSDEDGSPDLSYVESAIESIAPVLRPGDLVVIESTVP 123 (185)
T ss_dssp EEE----EBETTTSBETHHHHHHHHHHHHHHCSCEEEEESSSSS
T ss_pred EEEecCCCccccCCccHHHHHHHHHHHHHHHhhcceEEEccEEE
Confidence 9999875421 11 12344567888888866543
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PTZ00079 NADP-specific glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00043 Score=65.05 Aligned_cols=94 Identities=17% Similarity=0.172 Sum_probs=62.3
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEE-EEeCC----------chhHHH---Hhhc-------------CCccc
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVM-GTEID----------LICALQ---ALTE-------------GIPVL 111 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~-v~d~~----------~~r~~~---a~~~-------------G~~~~ 111 (243)
+..+.|++|+|-|+|++|..+|+.|...|++|+ ++|.+ .+.+.. .+.. +++.+
T Consensus 232 ~~~l~Gk~VaVqG~GnVg~~aa~~L~e~GakVVavSD~~G~iy~~~Gld~~~l~~l~~~k~~~~g~i~~~~~~~~~a~~~ 311 (454)
T PTZ00079 232 NDSLEGKTVVVSGSGNVAQYAVEKLLQLGAKVLTMSDSDGYIHEPNGFTKEKLAYLMDLKNVKRGRLKEYAKHSSTAKYV 311 (454)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCCcEECCCCCCHHHHHHHHHHHhhcCCcHHhhhhccCCcEEe
Confidence 446899999999999999999999999999988 78887 333211 1100 12222
Q ss_pred CHHhhh-cCCcEEEEccCChhcccHHHHccC-CCCeEEEEecCC
Q 037949 112 TREDVV-SEAGLFVTTTENADIIMVRHMKQM-KNAAIVCNIGHF 153 (243)
Q Consensus 112 ~~~~~~-~~aDvvi~a~G~~~~i~~~~l~~l-~~g~~vvnvg~~ 153 (243)
+.++.+ ..|||.+-|. ....|+.+..+.+ +.++.+|.-|..
T Consensus 312 ~~~~~~~~~cDI~iPcA-~~n~I~~~~a~~l~~~~ak~V~EgAN 354 (454)
T PTZ00079 312 PGKKPWEVPCDIAFPCA-TQNEINLEDAKLLIKNGCKLVAEGAN 354 (454)
T ss_pred CCcCcccCCccEEEecc-ccccCCHHHHHHHHHcCCeEEEecCC
Confidence 222222 3799999985 3455666555544 667777765544
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00038 Score=59.69 Aligned_cols=37 Identities=27% Similarity=0.294 Sum_probs=33.4
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+|+++|+|+. .||+.+++.+...|++|+++++++.+.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~ 39 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETA 39 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 6899999977 899999999999999999999987654
|
|
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00044 Score=61.15 Aligned_cols=89 Identities=18% Similarity=0.146 Sum_probs=67.2
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH---h----hh-cCCcEEEEccCChhc
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE---D----VV-SEAGLFVTTTENADI 132 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~---~----~~-~~aDvvi~a~G~~~~ 132 (243)
.|++|+|.|+ |++|..+++.++.+|++|++++.++++...+...|++ +++.. . .. .+.|.++++.|.+.
T Consensus 146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 224 (324)
T cd08288 146 GDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHT- 224 (324)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHHH-
Confidence 5789999998 8999999999999999999988888887677667763 22211 1 11 14678899988643
Q ss_pred ccHHHHccCCCCeEEEEecCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+. ..+..++.++.++..|..
T Consensus 225 ~~-~~~~~~~~~g~~~~~G~~ 244 (324)
T cd08288 225 LA-NVLAQTRYGGAVAACGLA 244 (324)
T ss_pred HH-HHHHHhcCCCEEEEEEec
Confidence 33 456777888999998875
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00043 Score=61.62 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=34.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~ 97 (243)
.+.+++++|+|+|++|++++..+...|++ |+++++++
T Consensus 123 ~~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 123 DVKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 35789999999999999999999999995 99999986
|
|
| >cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1 | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0011 Score=58.54 Aligned_cols=107 Identities=12% Similarity=0.120 Sum_probs=78.4
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhC----CC-------EEEEEeCCc-----------hhHHHHhhcC-CcccCHHh
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAV----GA-------RVMGTEIDL-----------ICALQALTEG-IPVLTRED 115 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~----Ga-------~V~v~d~~~-----------~r~~~a~~~G-~~~~~~~~ 115 (243)
+..+.+.+++|+|+|.-|.++|+.+... |+ +++++|.+. .+...+.... .+..++.+
T Consensus 20 g~~l~d~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e 99 (279)
T cd05312 20 GKPLSDQRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLE 99 (279)
T ss_pred CCChhhcEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHH
Confidence 4467899999999999999999888877 87 788888652 2222333211 12346788
Q ss_pred hhc--CCcEEEEccCChhcccHHHHccCC---CCeEEEEecCCCC--CCChhHHHHh
Q 037949 116 VVS--EAGLFVTTTENADIIMVRHMKQMK---NAAIVCNIGHFDN--EIDMLDLEAY 165 (243)
Q Consensus 116 ~~~--~aDvvi~a~G~~~~i~~~~l~~l~---~g~~vvnvg~~~~--~id~~~l~~~ 165 (243)
+++ ++|+++-+++.+++++.+.++.|. +.-+|.-.+-... |+..++...|
T Consensus 100 ~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~~E~~pe~a~~~ 156 (279)
T cd05312 100 VVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALSNPTSKAECTAEDAYKW 156 (279)
T ss_pred HHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCcCCccccCHHHHHHh
Confidence 888 899999999888899999999997 6777776665543 6776666554
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH |
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00046 Score=59.05 Aligned_cols=39 Identities=31% Similarity=0.369 Sum_probs=34.9
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.++|++++|+|+ |.||..+++.+...|++|+++++++..
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~ 51 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV 51 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 467999999997 599999999999999999999988754
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00073 Score=59.61 Aligned_cols=92 Identities=18% Similarity=0.197 Sum_probs=69.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH------Hh---hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR------ED---VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~------~~---~~--~~aDvvi~a~ 127 (243)
..+|++++|.|++ .+|+.+++.++..|++|++++.++.+...+...+.. +.+. .. .. .+.|+++++.
T Consensus 164 ~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 243 (342)
T cd08266 164 LRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVVEHV 243 (342)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEEEECC
Confidence 3578999999997 899999999999999999999888876665554532 1111 11 11 2689999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|... ++ ..++.++++|.++++|...
T Consensus 244 g~~~-~~-~~~~~l~~~G~~v~~~~~~ 268 (342)
T cd08266 244 GAAT-WE-KSLKSLARGGRLVTCGATT 268 (342)
T ss_pred cHHH-HH-HHHHHhhcCCEEEEEecCC
Confidence 8643 43 4688899999999998653
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK06476 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00052 Score=59.77 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=63.2
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC---EEEEEeCCchhHHHHhh-c-CCcc-cCHHhhhcCCcEEEEccCChhcccHHHHc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA---RVMGTEIDLICALQALT-E-GIPV-LTREDVVSEAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~~~r~~~a~~-~-G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~~~l~ 139 (243)
++.|+|+|.||..+++.+...|. .+.++++++++...... . +..+ .+..+.++++|+|+.|+.. ..+. +.+.
T Consensus 2 ~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p-~~~~-~vl~ 79 (258)
T PRK06476 2 KIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRP-QIAE-EVLR 79 (258)
T ss_pred eEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCH-HHHH-HHHH
Confidence 58999999999999999998885 35788998887644433 3 3443 3566777889999999863 2222 2222
Q ss_pred --cCCCCeEEEEecCCCCCCChhHHHH
Q 037949 140 --QMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 140 --~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.++++.+|+.+..+ ++.+.+..
T Consensus 80 ~l~~~~~~~vis~~ag---~~~~~l~~ 103 (258)
T PRK06476 80 ALRFRPGQTVISVIAA---TDRAALLE 103 (258)
T ss_pred HhccCCCCEEEEECCC---CCHHHHHH
Confidence 24567778775533 44444443
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0004 Score=60.52 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=35.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.|++++|+|+. .||+.+++.+...|++|+++++++...
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~ 55 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLG 55 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 3678999999976 899999999999999999999876543
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00039 Score=59.25 Aligned_cols=36 Identities=31% Similarity=0.556 Sum_probs=33.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ .||+.+|+.|...|++|+++++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~ 39 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE 39 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch
Confidence 579999999985 999999999999999999998865
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00028 Score=63.10 Aligned_cols=36 Identities=39% Similarity=0.498 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ +||+.+|+.|...|++|++++++.
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~ 42 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRST 42 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence 679999999997 899999999999999999998874
|
|
| >PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00082 Score=66.96 Aligned_cols=122 Identities=20% Similarity=0.242 Sum_probs=88.5
Q ss_pred Hhhhccccchhhhhhh---hccccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeCC------------chhHHH
Q 037949 41 DNLYGFRHSLPDGLMR---ATDITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEID------------LICALQ 102 (243)
Q Consensus 41 ~~~~~~~~~~~~av~~---~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~------------~~r~~~ 102 (243)
|..+|++-....++.. ..+..+...++++.|+|.-|.++++.+...|. +++++|.. +.+...
T Consensus 159 DD~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~~~~~k~~~ 238 (752)
T PRK07232 159 DDQHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAAAIACLNLLVALGAKKENIIVCDSKGVIYKGRTEGMDEWKAAY 238 (752)
T ss_pred cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHHHHHHHHHHHHcCCCcccEEEEcCCCeecCCCcccccHHHHHH
Confidence 3444555554444432 23445788999999999999999999999999 78888854 222222
Q ss_pred HhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHh
Q 037949 103 ALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAY 165 (243)
Q Consensus 103 a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~ 165 (243)
|.. ....++.++++++|+++-+++ +++++.+.++.|.+..+|.-.+-...|++.+....|
T Consensus 239 a~~--~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifalsNP~~E~~p~~a~~~ 298 (752)
T PRK07232 239 AVD--TDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALANPDPEITPEEAKAV 298 (752)
T ss_pred hcc--CCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecCCCCccCCHHHHHHh
Confidence 222 123468899999999999987 789999999999888888776766567777766554
|
|
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00046 Score=59.88 Aligned_cols=91 Identities=23% Similarity=0.200 Sum_probs=68.2
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh--hcCCcEEEEccCChh
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV--VSEAGLFVTTTENAD 131 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~--~~~aDvvi~a~G~~~ 131 (243)
..+|++++|.|+ |.+|+.+++.++..|++|++++.++ +...+...|.. +++ ..+. -.+.|++++++|...
T Consensus 142 ~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~ 220 (309)
T cd05289 142 LKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGET 220 (309)
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchHH
Confidence 357999999997 8999999999999999998887766 55555555642 221 1111 135899999998763
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+. ..++.+++++.++.+|...
T Consensus 221 -~~-~~~~~l~~~g~~v~~g~~~ 241 (309)
T cd05289 221 -LA-RSLALVKPGGRLVSIAGPP 241 (309)
T ss_pred -HH-HHHHHHhcCcEEEEEcCCC
Confidence 43 5788999999999998764
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2 | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00033 Score=61.24 Aligned_cols=93 Identities=16% Similarity=0.143 Sum_probs=59.0
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEE-EEeC----------CchhHHH---Hh-hc------------CCccc
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVM-GTEI----------DLICALQ---AL-TE------------GIPVL 111 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~-v~d~----------~~~r~~~---a~-~~------------G~~~~ 111 (243)
+..++|++|+|.|+|.+|+.+|+.|...|++|+ ++|. |...+.. .. .. +.+.+
T Consensus 33 ~~~l~g~~vaIqGfGnVG~~~a~~L~e~GakvvaVsD~~G~i~~~~Gld~~~l~~l~~~~~~~~~~v~~~~~~~~~a~~~ 112 (254)
T cd05313 33 NETLKGKRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKYF 112 (254)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHhhcCCCCEEe
Confidence 346899999999999999999999999999988 6772 1111100 00 01 12223
Q ss_pred CHHhhh-cCCcEEEEccCChhcccHHHHccC-CCCeEEEEecC
Q 037949 112 TREDVV-SEAGLFVTTTENADIIMVRHMKQM-KNAAIVCNIGH 152 (243)
Q Consensus 112 ~~~~~~-~~aDvvi~a~G~~~~i~~~~l~~l-~~g~~vvnvg~ 152 (243)
+.++.+ ..|||++.|. ....|+.+..+.+ ++++.+|.-|.
T Consensus 113 ~~~~~~~~~~DIliPcA-l~~~I~~~na~~i~~~~ak~I~EgA 154 (254)
T cd05313 113 EGKKPWEVPCDIAFPCA-TQNEVDAEDAKLLVKNGCKYVAEGA 154 (254)
T ss_pred CCcchhcCCCcEEEecc-ccccCCHHHHHHHHHcCCEEEEeCC
Confidence 333333 4799999985 3345776656655 33566665443
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t |
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00077 Score=59.72 Aligned_cols=91 Identities=13% Similarity=0.117 Sum_probs=69.3
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC-----HHh--hh-cCCcEEEEccCChh
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT-----RED--VV-SEAGLFVTTTENAD 131 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~-----~~~--~~-~~aDvvi~a~G~~~ 131 (243)
..+|++++|.|+ |.+|+.+++.++..|++|++++. +.+...+...|+..+. ..+ .. .+.|++++|+|...
T Consensus 137 ~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~ 215 (331)
T cd08273 137 VLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALRELGATPIDYRTKDWLPAMLTPGGVDVVFDGVGGES 215 (331)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHHHcCCeEEcCCCcchhhhhccCCCceEEEECCchHH
Confidence 457999999997 89999999999999999988876 6666666666743211 111 11 35899999998876
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+. ..++.++++|+++.+|...
T Consensus 216 -~~-~~~~~l~~~g~~v~~g~~~ 236 (331)
T cd08273 216 -YE-ESYAALAPGGTLVCYGGNS 236 (331)
T ss_pred -HH-HHHHHhcCCCEEEEEccCC
Confidence 43 5788999999999998764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00059 Score=58.63 Aligned_cols=37 Identities=30% Similarity=0.311 Sum_probs=33.3
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+|+++|+|++ .||..+++.|...|++|+++++++.+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~ 39 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKA 39 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 6899999986 899999999999999999999987654
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0006 Score=64.76 Aligned_cols=88 Identities=11% Similarity=0.079 Sum_probs=65.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc----CCc---ccCHHhhhc---CCcEEEEccCCh----
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE----GIP---VLTREDVVS---EAGLFVTTTENA---- 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~----G~~---~~~~~~~~~---~aDvvi~a~G~~---- 130 (243)
.++.|+|.|.+|..+|+.+...|.+|.++|+++.+.+..... |.. +.++++++. .+|+|+.+....
T Consensus 2 ~~IgvIGLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v~ 81 (470)
T PTZ00142 2 SDIGLIGLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAVD 81 (470)
T ss_pred CEEEEEeEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHHH
Confidence 369999999999999999999999999999999886444332 432 335666664 589887774332
Q ss_pred hcccHHHHccCCCCeEEEEecCC
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+++ .....+++|.++++.|-.
T Consensus 82 ~vi~-~l~~~L~~g~iIID~gn~ 103 (470)
T PTZ00142 82 ETID-NLLPLLEKGDIIIDGGNE 103 (470)
T ss_pred HHHH-HHHhhCCCCCEEEECCCC
Confidence 3343 356678899999998765
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0004 Score=59.79 Aligned_cols=36 Identities=33% Similarity=0.547 Sum_probs=33.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.|++++|+|++ .||..+++.+...|++|++++++
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3679999999987 89999999999999999999887
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00048 Score=59.76 Aligned_cols=40 Identities=28% Similarity=0.238 Sum_probs=35.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++++|+|++ .||..+++.|...|++|+++++++.++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~ 46 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKV 46 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 3679999999984 999999999999999999999987654
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00035 Score=66.69 Aligned_cols=41 Identities=34% Similarity=0.499 Sum_probs=35.8
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
...+++++|+|+ |.||+.+|+.|...|++|+++++++.++.
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~ 353 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAE 353 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 357899999997 59999999999999999999999876543
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00052 Score=58.95 Aligned_cols=40 Identities=33% Similarity=0.411 Sum_probs=35.6
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.+++++|+|+ |.||+.+++.|...|++|+++++++.+..
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~ 44 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARAR 44 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 56899999997 49999999999999999999999887653
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00052 Score=60.99 Aligned_cols=68 Identities=26% Similarity=0.264 Sum_probs=49.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-c----CC---cccCH---HhhhcCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-E----GI---PVLTR---EDVVSEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~----G~---~~~~~---~~~~~~aDvvi~a~G 128 (243)
...+++|+|+|+|+.+++++..|...|+ +|+++++++++.+.... . +. ...+. .+....+|+|++||.
T Consensus 124 ~~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred CcCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCC
Confidence 3578999999999999999999999998 89999999887543221 1 11 11221 223457899999973
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00034 Score=62.01 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=32.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|+. .||+.+++.|...|++|+++.+++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~ 89 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPE 89 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCc
Confidence 678999999985 899999999999999998877654
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00065 Score=59.26 Aligned_cols=91 Identities=18% Similarity=0.237 Sum_probs=69.7
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HH----hhh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RE----DVV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~----~~~--~~aDvvi~a~ 127 (243)
..+|++++|.|+ |.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ .. +.. ++.|++++|+
T Consensus 142 ~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 221 (325)
T cd08253 142 AKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVL 221 (325)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECC
Confidence 357999999996 7999999999999999999999988877666666653 111 11 111 3689999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|... +. ..++.++++|.++++|..
T Consensus 222 ~~~~-~~-~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 222 ANVN-LA-KDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred chHH-HH-HHHHhhCCCCEEEEEeec
Confidence 8764 32 467888999999999874
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK00676 hemA glutamyl-tRNA reductase; Validated | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00062 Score=61.86 Aligned_cols=89 Identities=11% Similarity=0.047 Sum_probs=59.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEc---cCCh-hcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTT---TENA-DIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a---~G~~-~~i~~ 135 (243)
.+.+++|+|+|+|-+|..+++.|+..|+ +|+++.++..+.... +. ....-+....+||||.| |+++ +.++.
T Consensus 171 ~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~~~~~---~~-~~~~~~~~~~~DvVIs~t~~Tas~~p~i~~ 246 (338)
T PRK00676 171 KSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLTLPYR---TV-VREELSFQDPYDVIFFGSSESAYAFPHLSW 246 (338)
T ss_pred CccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccccchh---hh-hhhhhhcccCCCEEEEcCCcCCCCCceeeH
Confidence 4789999999999999999999999997 799998876431100 00 00011223579999987 4444 34555
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+.+...++ -.++..+.+.
T Consensus 247 ~~~~~~~~-r~~iDLAvPR 264 (338)
T PRK00676 247 ESLADIPD-RIVFDFNVPR 264 (338)
T ss_pred HHHhhccC-cEEEEecCCC
Confidence 55554332 3778877763
|
|
| >TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0005 Score=65.13 Aligned_cols=69 Identities=19% Similarity=0.200 Sum_probs=51.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch---------------------hHHHHhhcCCccc---------C
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI---------------------CALQALTEGIPVL---------T 112 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~---------------------r~~~a~~~G~~~~---------~ 112 (243)
.+++|+|+|+|++|+.+|..|+..|.+|+++|.++. ........|+++. .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~ 219 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDIS 219 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCccC
Confidence 589999999999999999999999999999987652 2233445675421 1
Q ss_pred HHhhhcCCcEEEEccCChh
Q 037949 113 REDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 113 ~~~~~~~aDvvi~a~G~~~ 131 (243)
.++....+|.|+.|+|...
T Consensus 220 ~~~~~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 220 LDDLLEDYDAVFLGVGTYR 238 (467)
T ss_pred HHHHHhcCCEEEEEeCCCC
Confidence 2333357999999998754
|
This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli. |
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0005 Score=59.87 Aligned_cols=40 Identities=33% Similarity=0.382 Sum_probs=35.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++++|+|++ .||+.+++.|...|++|+++++++...
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~ 47 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKA 47 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4689999999985 999999999999999999999987644
|
|
| >PRK12861 malic enzyme; Reviewed | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00087 Score=66.82 Aligned_cols=119 Identities=18% Similarity=0.206 Sum_probs=86.2
Q ss_pred Hhhhccccchhhhhhh---hccccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeC------------CchhHHH
Q 037949 41 DNLYGFRHSLPDGLMR---ATDITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEI------------DLICALQ 102 (243)
Q Consensus 41 ~~~~~~~~~~~~av~~---~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~------------~~~r~~~ 102 (243)
|..+|++-....++.. ..+..+...++++.|+|.-|.+++..+...|+ +++++|. ++.+...
T Consensus 163 DD~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaAg~~ia~~l~~~G~~~~~i~~~D~~Gli~~~r~~~l~~~k~~~ 242 (764)
T PRK12861 163 DDQHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAAALACLDLLVDLGLPVENIWVTDIEGVVYRGRTTLMDPDKERF 242 (764)
T ss_pred cccchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHHHHHHHHHHHHcCCChhhEEEEcCCCeeeCCCcccCCHHHHHH
Confidence 3444555544444432 23445788999999999999999999999999 7999983 3333333
Q ss_pred HhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHH
Q 037949 103 ALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDL 162 (243)
Q Consensus 103 a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l 162 (243)
|... ...++.++++++|+++-+++ +++++.+.++.|.+..+|.-.+-...|+..+..
T Consensus 243 a~~~--~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLsNPtpE~~pe~a 299 (764)
T PRK12861 243 AQET--DARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALANPTPEIFPELA 299 (764)
T ss_pred Hhhc--CCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECCCCCccCCHHHH
Confidence 4332 23468899999999999986 789999999999888887766665556665544
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00053 Score=60.93 Aligned_cols=90 Identities=26% Similarity=0.269 Sum_probs=60.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-c---CC--cccCHHhh--hcCCcEEEEccCC--
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-E---GI--PVLTREDV--VSEAGLFVTTTEN-- 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~---G~--~~~~~~~~--~~~aDvvi~a~G~-- 129 (243)
..+|++++|+|+|+.+++++..|+..|+ +|+|++++.+|..+..+ . +. ......+. ...+|++|+||+.
T Consensus 123 ~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm 202 (283)
T COG0169 123 DVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLEEADLLINATPVGM 202 (283)
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccccccCEEEECCCCCC
Confidence 4568999999999999999999999997 89999999988644332 1 11 11222211 1259999999742
Q ss_pred h----h-cccHHHHccCCCCeEEEEecCC
Q 037949 130 A----D-IIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 ~----~-~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
. . .+. .+.++++.++..+=..
T Consensus 203 ~~~~~~~~~~---~~~l~~~~~v~D~vY~ 228 (283)
T COG0169 203 AGPEGDSPVP---AELLPKGAIVYDVVYN 228 (283)
T ss_pred CCCCCCCCCc---HHhcCcCCEEEEeccC
Confidence 1 1 121 3456677777665443
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00044 Score=58.94 Aligned_cols=39 Identities=33% Similarity=0.474 Sum_probs=34.8
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.+++++|+|+ |.||..+++.+...|++|+++++++...
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~ 43 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGA 43 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 57899999998 6999999999999999999999986543
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00066 Score=58.35 Aligned_cols=37 Identities=38% Similarity=0.527 Sum_probs=33.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+++++++|+|++ .||+.+++.|...|++|+++++++.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~ 43 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL 43 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH
Confidence 678999999986 8999999999999999999998753
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00063 Score=59.15 Aligned_cols=37 Identities=27% Similarity=0.272 Sum_probs=32.8
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
|+++|+|++ .||..+++.+...|++|+++++++.+..
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~ 39 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE 39 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 689999975 9999999999999999999999876543
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00097 Score=58.95 Aligned_cols=83 Identities=13% Similarity=0.068 Sum_probs=56.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc------------cCHHhhhcCCcEEEEccCChhc-
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV------------LTREDVVSEAGLFVTTTENADI- 132 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~------------~~~~~~~~~aDvvi~a~G~~~~- 132 (243)
++.|+|+|.+|..+|..|...|.+|+++++++.+.+.....|... .+..+ ...+|+|+.|+.....
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~k~~~~~ 80 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAVKAYQLP 80 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEecccccHH
Confidence 589999999999999999999999999999877665544445421 11233 3789999999765432
Q ss_pred --ccHHHHccCCCCeEEEEe
Q 037949 133 --IMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 133 --i~~~~l~~l~~g~~vvnv 150 (243)
+. ..-..+.++..++..
T Consensus 81 ~~~~-~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 81 AALP-SLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHH-HHhhhcCCCCEEEEe
Confidence 21 122234455566653
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00049 Score=59.57 Aligned_cols=38 Identities=34% Similarity=0.469 Sum_probs=33.3
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++|+|+. .||+.+++.|...|++|++.++++.+.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~ 41 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA 41 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc
Confidence 46789999975 899999999999999999999887543
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00098 Score=56.49 Aligned_cols=87 Identities=22% Similarity=0.171 Sum_probs=59.6
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh--hcCCc--ccCHHhhhcCCcEEEEccCCh---hcccHHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL--TEGIP--VLTREDVVSEAGLFVTTTENA---DIIMVRH 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~--~~G~~--~~~~~~~~~~aDvvi~a~G~~---~~i~~~~ 137 (243)
++++|+|.|.||.++|.++...|.+|++..++.+....+. ..+.. ....+++.+.+|||+.++.-. .++ .+.
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~-~~l 80 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVL-AEL 80 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHH-HHH
Confidence 5789999999999999999999999999855444322322 23332 345678888999999987543 223 233
Q ss_pred HccCCCCeEEEEecCC
Q 037949 138 MKQMKNAAIVCNIGHF 153 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~ 153 (243)
.+.+. |-+|+.+...
T Consensus 81 ~~~~~-~KIvID~tnp 95 (211)
T COG2085 81 RDALG-GKIVIDATNP 95 (211)
T ss_pred HHHhC-CeEEEecCCC
Confidence 33343 6788876553
|
|
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00086 Score=60.37 Aligned_cols=80 Identities=15% Similarity=0.173 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCchhHH-----HHhhcCCcc-cCHHhhhcCCcEEEEccCChhccc---HHHHccCCCCe
Q 037949 75 VGRGCAAALKAVGARVMGTEIDLICAL-----QALTEGIPV-LTREDVVSEAGLFVTTTENADIIM---VRHMKQMKNAA 145 (243)
Q Consensus 75 IG~~~A~~l~~~Ga~V~v~d~~~~r~~-----~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~---~~~l~~l~~g~ 145 (243)
-|..+|..|...|.+|+++|+++.+.. .....|+.. .+..++.+++|+||.|..+...+. ...+..+++|.
T Consensus 31 gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L~~Ga 110 (341)
T TIGR01724 31 GGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHVPENA 110 (341)
T ss_pred CHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcCCCCC
Confidence 589999999999999999999876432 344567764 457788899999999987654331 23467789999
Q ss_pred EEEEecCCC
Q 037949 146 IVCNIGHFD 154 (243)
Q Consensus 146 ~vvnvg~~~ 154 (243)
++++.+..+
T Consensus 111 IVID~STIs 119 (341)
T TIGR01724 111 VICNTCTVS 119 (341)
T ss_pred EEEECCCCC
Confidence 999987653
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0005 Score=58.83 Aligned_cols=40 Identities=30% Similarity=0.395 Sum_probs=35.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.+++++|+|++ .||..+++.+...|++|+++++++.++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~ 45 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGC 45 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4678999999977 899999999999999999999987654
|
|
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0011 Score=57.84 Aligned_cols=92 Identities=18% Similarity=0.202 Sum_probs=69.3
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~ 127 (243)
..+|++++|.|+ |.+|+.+++.++.+|++|+++..++.+...+...|.+ +.+ ..+. . .+.|++++++
T Consensus 137 ~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 216 (325)
T TIGR02824 137 LKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIV 216 (325)
T ss_pred CCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECC
Confidence 357999999996 7999999999999999999998888776666555653 111 1111 1 2589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|.. .+. ..+..++++|.++.+|..+
T Consensus 217 ~~~-~~~-~~~~~l~~~g~~v~~g~~~ 241 (325)
T TIGR02824 217 GGS-YLN-RNIKALALDGRIVQIGFQG 241 (325)
T ss_pred chH-HHH-HHHHhhccCcEEEEEecCC
Confidence 864 343 4688889999999988653
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >PRK09414 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00081 Score=63.30 Aligned_cols=94 Identities=18% Similarity=0.173 Sum_probs=61.1
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEE-e----------CCchhHHHHhhc--C----------CcccCHHh
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGT-E----------IDLICALQALTE--G----------IPVLTRED 115 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~-d----------~~~~r~~~a~~~--G----------~~~~~~~~ 115 (243)
+..+.|++|+|.|+|.+|+.+|+.|..+|++|+.+ | +|...+...... | .+.++.++
T Consensus 227 ~~~l~g~rVaIqGfGnVG~~~A~~L~~~GakVVavsDs~G~iyn~~GLD~~~L~~~k~~~~~~l~~~~~~~~~~~i~~~~ 306 (445)
T PRK09414 227 GDSFEGKRVVVSGSGNVAIYAIEKAQQLGAKVVTCSDSSGYVYDEEGIDLEKLKEIKEVRRGRISEYAEEFGAEYLEGGS 306 (445)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCchhhhhhhcCCeecCCcc
Confidence 44689999999999999999999999999998775 8 666544322211 1 11122223
Q ss_pred hh-cCCcEEEEccCChhcccHHHHccC-CCCeEEEEecCC
Q 037949 116 VV-SEAGLFVTTTENADIIMVRHMKQM-KNAAIVCNIGHF 153 (243)
Q Consensus 116 ~~-~~aDvvi~a~G~~~~i~~~~l~~l-~~g~~vvnvg~~ 153 (243)
.+ .++||++.|+- .+.++.+....+ .+++.+|.-|..
T Consensus 307 i~~~d~DVliPaAl-~n~It~~~a~~i~~~~akiIvEgAN 345 (445)
T PRK09414 307 PWSVPCDIALPCAT-QNELDEEDAKTLIANGVKAVAEGAN 345 (445)
T ss_pred ccccCCcEEEecCC-cCcCCHHHHHHHHHcCCeEEEcCCC
Confidence 22 37999999964 344655544444 336666654443
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00038 Score=54.65 Aligned_cols=87 Identities=24% Similarity=0.298 Sum_probs=51.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEE-eCCchhHHHHhhc-C-CcccCHHhhhcCCcEEEEccCChhc--ccHHHH
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGT-EIDLICALQALTE-G-IPVLTREDVVSEAGLFVTTTENADI--IMVRHM 138 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~-d~~~~r~~~a~~~-G-~~~~~~~~~~~~aDvvi~a~G~~~~--i~~~~l 138 (243)
--++.|||+|.+|..+++.|...|.+|..+ .+++...+.+... + ..+.++.+.+..+|+++.++....+ +- +.+
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDdaI~~va-~~L 88 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDAIAEVA-EQL 88 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCHHHHHH-HHH
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechHHHHHHH-HHH
Confidence 458999999999999999999999988665 4555444444432 2 2345667788899999999765432 11 123
Q ss_pred cc---CCCCeEEEEec
Q 037949 139 KQ---MKNAAIVCNIG 151 (243)
Q Consensus 139 ~~---l~~g~~vvnvg 151 (243)
.. .+++.+|+-++
T Consensus 89 a~~~~~~~g~iVvHtS 104 (127)
T PF10727_consen 89 AQYGAWRPGQIVVHTS 104 (127)
T ss_dssp HCC--S-TT-EEEES-
T ss_pred HHhccCCCCcEEEECC
Confidence 32 46777777554
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00079 Score=58.78 Aligned_cols=38 Identities=32% Similarity=0.269 Sum_probs=34.1
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++|+|+. .||+.+++.|...|++|+++++++.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~ 41 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAAR 41 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHH
Confidence 46889999985 899999999999999999999988764
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00048 Score=61.00 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=32.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.++|++++|+|++ .||+.+|+.|...|++|++.+++.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~ 83 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPV 83 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCc
Confidence 3689999999986 899999999999999999887643
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00015 Score=62.56 Aligned_cols=36 Identities=25% Similarity=0.281 Sum_probs=32.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+++++++|+|++ .||+.+++.+...|++|++..++.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~ 41 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSD 41 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence 689999999987 899999999999999998876643
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0005 Score=59.04 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=35.4
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.++|++++|+|++ .||+.+++.|...|++|+++++++...
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~ 44 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD 44 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH
Confidence 4789999999976 899999999999999999998877643
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00067 Score=63.56 Aligned_cols=68 Identities=25% Similarity=0.260 Sum_probs=49.8
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-H----HHHhhcCCccc--C-HHhhhcCCcEEEEccCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-A----LQALTEGIPVL--T-REDVVSEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~----~~a~~~G~~~~--~-~~~~~~~aDvvi~a~G~ 129 (243)
+.+|+|+|+|+|++|+.+|..|...|++|+++|.++.. . ......|..+. + .++...++|+|+.++|.
T Consensus 3 ~~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 3 LKGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGV 78 (450)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCC
Confidence 46899999999999999999999999999999997532 2 11122354322 1 23344679999988874
|
|
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0017 Score=56.82 Aligned_cols=92 Identities=13% Similarity=0.132 Sum_probs=69.3
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HH----hhh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RE----DVV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~----~~~--~~aDvvi~a~ 127 (243)
..++++++|.|+ |.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ .. +.. ...|+++++.
T Consensus 142 ~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 221 (328)
T cd08268 142 LRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPV 221 (328)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECC
Confidence 357899999998 8999999999999999999998888776655555542 211 11 112 2589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|... .. ..++.++++|+++..|..+
T Consensus 222 ~~~~-~~-~~~~~l~~~g~~v~~g~~~ 246 (328)
T cd08268 222 GGPQ-FA-KLADALAPGGTLVVYGALS 246 (328)
T ss_pred chHh-HH-HHHHhhccCCEEEEEEeCC
Confidence 8743 33 4688899999999988653
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00058 Score=68.06 Aligned_cols=83 Identities=18% Similarity=0.222 Sum_probs=57.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-c------------c-cCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-P------------V-LTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~------------~-~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|++++.++.+.. .|. . . .+. +.+++
T Consensus 314 ~~v~ViGaG~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 392 (715)
T PRK11730 314 KQAAVLGAGIMGGGIAYQSASKGVPVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRPTLDY-AGFER 392 (715)
T ss_pred ceEEEECCchhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeCCH-HHhcC
Confidence 68999999999999999999999999999999987644321 121 0 0 011 33579
Q ss_pred CcEEEEccCC----h-hcccHHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTEN----A-DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~----~-~~i~~~~l~~l~~g~~vvn 149 (243)
+|+||||..- + .++ .+.-+.+++++++..
T Consensus 393 aDlViEav~E~l~~K~~vf-~~l~~~~~~~~ilas 426 (715)
T PRK11730 393 VDVVVEAVVENPKVKAAVL-AEVEQKVREDTILAS 426 (715)
T ss_pred CCEEEecccCcHHHHHHHH-HHHHhhCCCCcEEEE
Confidence 9999999632 1 223 222345578887774
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00093 Score=57.38 Aligned_cols=40 Identities=30% Similarity=0.488 Sum_probs=35.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.+++++|+|+. .||+.+++.+...|++|+++++++.+.
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~ 48 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA 48 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 3679999999987 899999999999999999998877654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0011 Score=56.60 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=33.0
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++++|+|+. .||+.+++.|...|++|+++++++.++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~ 39 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLD 39 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 679999965 9999999999999999999999887653
|
|
| >PRK10637 cysG siroheme synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00053 Score=64.90 Aligned_cols=88 Identities=19% Similarity=0.281 Sum_probs=56.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC--CchhHHHHhhcC-CcccC---HHhhhcCCcEEEEccCChhccc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI--DLICALQALTEG-IPVLT---REDVVSEAGLFVTTTENADIIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~--~~~r~~~a~~~G-~~~~~---~~~~~~~aDvvi~a~G~~~~i~ 134 (243)
.+.|++|+|+|+|.++..=++.|...|++|+|+-+ +++-. .....| +.... ..+.++++++|+.||+.+. ++
T Consensus 9 ~l~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~-~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~-~n 86 (457)
T PRK10637 9 QLRDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFT-AWADAGMLTLVEGPFDESLLDTCWLAIAATDDDA-VN 86 (457)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHH-HHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHH-Hh
Confidence 47899999999999999989999999999988733 33322 112222 22111 1344678999999987754 34
Q ss_pred HHHHccCCCCeEEEEe
Q 037949 135 VRHMKQMKNAAIVCNI 150 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnv 150 (243)
.+.....+..++++|+
T Consensus 87 ~~i~~~a~~~~~lvN~ 102 (457)
T PRK10637 87 QRVSEAAEARRIFCNV 102 (457)
T ss_pred HHHHHHHHHcCcEEEE
Confidence 3333333444555554
|
|
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00088 Score=63.60 Aligned_cols=86 Identities=16% Similarity=0.134 Sum_probs=64.2
Q ss_pred EEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc---C--Cc-ccCHHhhh---cCCcEEEEccCCh----hcc
Q 037949 67 AVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE---G--IP-VLTREDVV---SEAGLFVTTTENA----DII 133 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~---G--~~-~~~~~~~~---~~aDvvi~a~G~~----~~i 133 (243)
+.|||.|.+|..+|+.+...|.+|+++|+++.+.+...+. | +. ..++++.+ +.+|+|+.+.... .++
T Consensus 2 IG~IGLG~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v~~Vi 81 (467)
T TIGR00873 2 IGVIGLAVMGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDAVI 81 (467)
T ss_pred EEEEeeHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHHHHHH
Confidence 7899999999999999999999999999999987655544 2 22 23455544 4689988886542 334
Q ss_pred cHHHHccCCCCeEEEEecCC
Q 037949 134 MVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~ 153 (243)
+ .....+++|.++++.|-.
T Consensus 82 ~-~l~~~L~~g~iIID~gns 100 (467)
T TIGR00873 82 N-QLLPLLEKGDIIIDGGNS 100 (467)
T ss_pred H-HHHhhCCCCCEEEECCCc
Confidence 3 345667889999998754
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00089 Score=56.76 Aligned_cols=40 Identities=33% Similarity=0.538 Sum_probs=35.7
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++++|+|+ |.||+.+++.+...|++|+++++++++.
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~ 46 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAAL 46 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 367899999998 5999999999999999999999987654
|
|
| >TIGR02437 FadB fatty oxidation complex, alpha subunit FadB | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00068 Score=67.56 Aligned_cols=83 Identities=19% Similarity=0.243 Sum_probs=57.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-cc-------------cCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-PV-------------LTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~~-------------~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|++++.++.+.. .|. .. .+. +.+.+
T Consensus 314 ~~v~ViGaG~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 392 (714)
T TIGR02437 314 KQAAVLGAGIMGGGIAYQSASKGTPIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGITPTLSY-AGFDN 392 (714)
T ss_pred ceEEEECCchHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeCCH-HHhcC
Confidence 68999999999999999999999999999999987654321 111 00 011 23579
Q ss_pred CcEEEEccCC----h-hcccHHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTEN----A-DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~----~-~~i~~~~l~~l~~g~~vvn 149 (243)
+|+||||.-- + .++ .+.-..+++++++..
T Consensus 393 aDlViEav~E~l~~K~~vf-~~l~~~~~~~~ilas 426 (714)
T TIGR02437 393 VDIVVEAVVENPKVKAAVL-AEVEQHVREDAILAS 426 (714)
T ss_pred CCEEEEcCcccHHHHHHHH-HHHHhhCCCCcEEEE
Confidence 9999999632 2 223 222345588888874
|
Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399. |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00043 Score=66.98 Aligned_cols=66 Identities=21% Similarity=0.163 Sum_probs=53.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C---H---Hh-hhcCCcEEEEccCCh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T---R---ED-VVSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~---~---~~-~~~~aDvvi~a~G~~ 130 (243)
.+++|+|+|++|+.+++.|+..|.+|+++|.|+++.+.+.+.|+.++ | . ++ -++++|.++.++++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCCh
Confidence 68999999999999999999999999999999999888887776532 2 1 11 146899887776653
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00077 Score=64.94 Aligned_cols=93 Identities=25% Similarity=0.216 Sum_probs=59.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCcccCHHhh----hcCCcEEEEccCC--hhcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIPVLTREDV----VSEAGLFVTTTEN--ADII 133 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~~~~~~~~----~~~aDvvi~a~G~--~~~i 133 (243)
.+.+++|+|+|+|++|++++..|...|++|++++++.++..... ..+....+..+. ...+|++++|++. .+..
T Consensus 376 ~~~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~ 455 (529)
T PLN02520 376 PLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNV 455 (529)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCC
Confidence 46789999999999999999999999999999999877654332 223222333221 1357888888632 1111
Q ss_pred cH--HHHccCCCCeEEEEecCC
Q 037949 134 MV--RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 134 ~~--~~l~~l~~g~~vvnvg~~ 153 (243)
+. -....+++...+..+-..
T Consensus 456 ~~~pl~~~~l~~~~~v~D~vY~ 477 (529)
T PLN02520 456 DETPISKHALKHYSLVFDAVYT 477 (529)
T ss_pred CCCcccHhhCCCCCEEEEeccC
Confidence 00 012345666666665544
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0013 Score=58.56 Aligned_cols=104 Identities=15% Similarity=0.100 Sum_probs=80.4
Q ss_pred ccchhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcc-c-----CHHhhh-
Q 037949 47 RHSLPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPV-L-----TREDVV- 117 (243)
Q Consensus 47 ~~~~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~-~-----~~~~~~- 117 (243)
+...+.++.+-. ...+|++|+|-++ |++|..+.+.++..|++|+.+--++++.....+ .|++. + ++.+.+
T Consensus 135 G~TAY~gLl~ig-qpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~ 213 (340)
T COG2130 135 GLTAYFGLLDIG-QPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALK 213 (340)
T ss_pred hHHHHHHHHHhc-CCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHH
Confidence 344566666543 3578999999995 699999999999999999999888888777766 67752 2 333332
Q ss_pred ----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 ----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
++.|+.||++|.+- ++ +.+..|...++++.+|.-
T Consensus 214 ~a~P~GIDvyfeNVGg~v-~D-Av~~~ln~~aRi~~CG~I 251 (340)
T COG2130 214 EACPKGIDVYFENVGGEV-LD-AVLPLLNLFARIPVCGAI 251 (340)
T ss_pred HHCCCCeEEEEEcCCchH-HH-HHHHhhccccceeeeeeh
Confidence 57899999998853 54 579999999999999864
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0016 Score=54.95 Aligned_cols=35 Identities=23% Similarity=0.476 Sum_probs=33.0
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEID 96 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~ 96 (243)
+..++|+|+|+|.+|..+|..|...|. +++++|.|
T Consensus 19 L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 678999999999999999999999999 79999988
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00071 Score=59.47 Aligned_cols=86 Identities=16% Similarity=0.088 Sum_probs=57.7
Q ss_pred EEEEEcCChHHHHHHHHHHhC--CCE-EEEEeCCchhHHHHhh-cCCc-ccCHHhhhcCCcEEEEccCChhcccHHHHcc
Q 037949 66 IAVDCGHGDVGRGCAAALKAV--GAR-VMGTEIDLICALQALT-EGIP-VLTREDVVSEAGLFVTTTENADIIMVRHMKQ 140 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~--Ga~-V~v~d~~~~r~~~a~~-~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~ 140 (243)
+++|+|+|.||..+++.+... +.+ +.++|+++.+.....+ .+.. ..+.++.+.++|+|++|++..... .-....
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~~~~~~ell~~~DvVvi~a~~~~~~-~~~~~a 81 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKACLSIDELVEDVDLVVECASVNAVE-EVVPKS 81 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCeeECCHHHHhcCCCEEEEcCChHHHH-HHHHHH
Confidence 699999999999999998875 465 5578999887644332 3443 345677778899999998654332 223344
Q ss_pred CCCCeEEEEecC
Q 037949 141 MKNAAIVCNIGH 152 (243)
Q Consensus 141 l~~g~~vvnvg~ 152 (243)
++.|.-++..+.
T Consensus 82 l~~Gk~Vvv~s~ 93 (265)
T PRK13304 82 LENGKDVIIMSV 93 (265)
T ss_pred HHcCCCEEEEch
Confidence 455555554443
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0014 Score=56.51 Aligned_cols=36 Identities=19% Similarity=0.089 Sum_probs=32.3
Q ss_pred EEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 66 IAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 66 ~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++|+|++ .||+.+++.+...|++|+++++++.++.
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 38 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLE 38 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 68999986 8999999999999999999999877653
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00076 Score=58.08 Aligned_cols=38 Identities=13% Similarity=-0.011 Sum_probs=33.7
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++++|+|+. .||+.+++.|...|++|+++++++.++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~ 40 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQ 40 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4789999965 9999999999999999999999887653
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00075 Score=57.32 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=33.9
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+|+++|+|+ |.||+.+++.|...|++|+++++++.+.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~ 43 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDAL 43 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4689999997 6999999999999999999999987654
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00047 Score=58.57 Aligned_cols=40 Identities=23% Similarity=0.190 Sum_probs=35.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++|++++|+|++ .||+.+++.+...|++|+++++++.+..
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~ 44 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE 44 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHH
Confidence 678999999975 8999999999999999999999887643
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00044 Score=59.65 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=30.8
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeC
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
++||+++|+|++ .||+.+|+.+...|++|+++++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~ 40 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYW 40 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEec
Confidence 679999999995 7999999999999999998754
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00084 Score=53.12 Aligned_cols=70 Identities=21% Similarity=0.214 Sum_probs=54.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C---H-HhhhcCCcEEEEccCChhcc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T---R-EDVVSEAGLFVTTTENADII 133 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~---~-~~~~~~aDvvi~a~G~~~~i 133 (243)
++++++++|+| -|..+|..|...|.+|+++|.++.+.+.+...+.+++ + + -+.-+++|++.++-..+++.
T Consensus 16 ~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp~el~ 91 (134)
T PRK04148 16 KNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPPRDLQ 91 (134)
T ss_pred cCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCCHHHH
Confidence 56889999999 8998999999999999999999998877777665422 2 2 23457899998886555543
|
|
| >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00076 Score=57.44 Aligned_cols=91 Identities=21% Similarity=0.233 Sum_probs=61.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc-hhHHHHhhc-CCcccC--H-HhhhcCCcEEEEccCChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL-ICALQALTE-GIPVLT--R-EDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~-~r~~~a~~~-G~~~~~--~-~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
.+.|++|+|+|+|.+|..=++.+...|++|+|+-.+. ......... +..... . .+.+.++++|+.||.++. ++.
T Consensus 9 ~l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~-ln~ 87 (210)
T COG1648 9 DLEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEE-LNE 87 (210)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHH-HHH
Confidence 4789999999999999999999999999999985443 222111122 221111 1 122345999999988765 555
Q ss_pred HHHccCCCCeEEEEecC
Q 037949 136 RHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~ 152 (243)
......++-++++|+.-
T Consensus 88 ~i~~~a~~~~i~vNv~D 104 (210)
T COG1648 88 RIAKAARERRILVNVVD 104 (210)
T ss_pred HHHHHHHHhCCceeccC
Confidence 56666677778888643
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00091 Score=59.11 Aligned_cols=38 Identities=26% Similarity=0.375 Sum_probs=33.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++|++++|+|++ .||..+++.+...|++|+++++++.
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~ 81 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEH 81 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4679999999975 8999999999999999999988753
|
|
| >PRK14030 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00092 Score=62.85 Aligned_cols=94 Identities=18% Similarity=0.220 Sum_probs=60.6
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEE--------Ee---CCchhH---HHHhh------------c-CCccc
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMG--------TE---IDLICA---LQALT------------E-GIPVL 111 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v--------~d---~~~~r~---~~a~~------------~-G~~~~ 111 (243)
+..+.|++|+|-|+|.+|..+|+.|...|++|++ +| +|..++ ...+. . |.+.+
T Consensus 223 g~~l~g~~vaIQGfGnVG~~aA~~L~e~GakvVavSD~~G~i~d~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~ga~~i 302 (445)
T PRK14030 223 GIDIKGKTVAISGFGNVAWGAATKATELGAKVVTISGPDGYIYDPDGISGEKIDYMLELRASGNDIVAPYAEKFPGSTFF 302 (445)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHHHHhcCccHHHHHhcCCCCEEc
Confidence 4468999999999999999999999999999988 67 454442 11111 0 22222
Q ss_pred CHHhhh-cCCcEEEEccCChhcccHHHHccC-CCCeEEEEecCC
Q 037949 112 TREDVV-SEAGLFVTTTENADIIMVRHMKQM-KNAAIVCNIGHF 153 (243)
Q Consensus 112 ~~~~~~-~~aDvvi~a~G~~~~i~~~~l~~l-~~g~~vvnvg~~ 153 (243)
+.++.+ ..|||.+.|. ..+.|+.+..+.+ +.++.+|.=|..
T Consensus 303 ~~~~~~~~~cDVliPcA-l~n~I~~~na~~l~~~~ak~V~EgAN 345 (445)
T PRK14030 303 AGKKPWEQKVDIALPCA-TQNELNGEDADKLIKNGVLCVAEVSN 345 (445)
T ss_pred CCccceeccccEEeecc-ccccCCHHHHHHHHHcCCeEEEeCCC
Confidence 333332 3799999885 3345665555545 445666654443
|
|
| >COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00093 Score=61.81 Aligned_cols=83 Identities=19% Similarity=0.296 Sum_probs=55.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch------------------hHHHHh-hcCCcccCHHhhh-cCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI------------------CALQAL-TEGIPVLTREDVV-SEA 120 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~------------------r~~~a~-~~G~~~~~~~~~~-~~a 120 (243)
.+.|++|+|-|+|++|.-+|+.+...|++|++++-+.. +..... ..|.+.++.++.+ .+|
T Consensus 204 ~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~~~~~v~~~~ga~~i~~~e~~~~~c 283 (411)
T COG0334 204 DLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKERRGSVAEYAGAEYITNEELLEVDC 283 (411)
T ss_pred CcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhhhhhhHHhhcCceEccccccccccC
Confidence 37999999999999999999999999999888755443 111111 1233333334433 379
Q ss_pred cEEEEccCChhcccHHHHccCCCC
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNA 144 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g 144 (243)
||.+.|. ..+.|+.+..+.++..
T Consensus 284 DIl~PcA-~~n~I~~~na~~l~ak 306 (411)
T COG0334 284 DILIPCA-LENVITEDNADQLKAK 306 (411)
T ss_pred cEEcccc-cccccchhhHHHhhhc
Confidence 9998884 3344666666666544
|
|
| >PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0009 Score=65.88 Aligned_cols=68 Identities=22% Similarity=0.162 Sum_probs=51.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch---------------------hHHHHhhcCCccc---------C
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI---------------------CALQALTEGIPVL---------T 112 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~---------------------r~~~a~~~G~~~~---------~ 112 (243)
.|++|+|||+|+.|+.+|..|+..|.+|+++|..+. +.......|+++. +
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~ 388 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDIT 388 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcCC
Confidence 589999999999999999999999999999987763 2223344565421 2
Q ss_pred HHhhhcCCcEEEEccCCh
Q 037949 113 REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 113 ~~~~~~~aDvvi~a~G~~ 130 (243)
+.+...+.|.|+.++|..
T Consensus 389 ~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 389 FSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred HHHHHhcCCEEEEeCCCC
Confidence 334446799999999864
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00082 Score=57.76 Aligned_cols=38 Identities=34% Similarity=0.386 Sum_probs=34.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++|++++|+|+. .||..+++.|...|++|+++++++.
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh
Confidence 3679999999975 9999999999999999999988764
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00087 Score=63.48 Aligned_cols=70 Identities=26% Similarity=0.146 Sum_probs=50.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-----HHHHhhcCCcccC--HHhhhcCCcEEEEccCCh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-----ALQALTEGIPVLT--REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-----~~~a~~~G~~~~~--~~~~~~~aDvvi~a~G~~ 130 (243)
.+.+++|+|+|+|++|+.+|..|+..|.+|+++|.++.. .......|+++.. ..+....+|+|+.++|.+
T Consensus 13 ~~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 13 DWQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPTLPEDTDLVVTSPGWR 89 (480)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCccccCCCCEEEECCCcC
Confidence 356899999999999999999999999999999976531 1122234654321 111234689999998864
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0012 Score=58.41 Aligned_cols=64 Identities=20% Similarity=0.146 Sum_probs=47.3
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-hcCCcccCHHhh-hcCCcEEEEccC
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-TEGIPVLTREDV-VSEAGLFVTTTE 128 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~~G~~~~~~~~~-~~~aDvvi~a~G 128 (243)
.+++|+|+|+|+.+++++..|+..|+ +|+++++++++.+... ..+.... .+. ...+|+||+||.
T Consensus 121 ~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~~--~~~~~~~~dlvINaTp 187 (272)
T PRK12550 121 PDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEWR--PDLGGIEADILVNVTP 187 (272)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcch--hhcccccCCEEEECCc
Confidence 46799999999999999999999998 6999999988754332 2232211 111 245899999973
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0012 Score=58.84 Aligned_cols=102 Identities=14% Similarity=0.073 Sum_probs=61.2
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCch---hHHHH-hhcC------CcccCHH-----
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLI---CALQA-LTEG------IPVLTRE----- 114 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~---r~~~a-~~~G------~~~~~~~----- 114 (243)
+.++++. +..+.+++++|+|+|+.+++++..+...|+ +|+++++++. +.+.. ...+ ..+.+.+
T Consensus 112 ~~~l~~~-~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l 190 (288)
T PRK12749 112 IRAIKES-GFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAF 190 (288)
T ss_pred HHHHHhc-CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhh
Confidence 4455432 334688999999999999999999999998 8999999853 33221 1111 1122222
Q ss_pred -hhhcCCcEEEEccCC--hhcccH---HHHccCCCCeEEEEecCC
Q 037949 115 -DVVSEAGLFVTTTEN--ADIIMV---RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 115 -~~~~~aDvvi~a~G~--~~~i~~---~~l~~l~~g~~vvnvg~~ 153 (243)
+....+|+||+||.. .+..+. .....++++..|..+=..
T Consensus 191 ~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~ 235 (288)
T PRK12749 191 AEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYN 235 (288)
T ss_pred hhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCC
Confidence 234578999999732 110000 012345666666665443
|
|
| >PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00093 Score=65.89 Aligned_cols=68 Identities=18% Similarity=0.126 Sum_probs=50.8
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch---------------------hHHHHhhcCCccc---------C
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI---------------------CALQALTEGIPVL---------T 112 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~---------------------r~~~a~~~G~~~~---------~ 112 (243)
.|++|+|||+|+.|+.+|..|+..|.+|+++|.++. +...+...|+++. +
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i~ 405 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDIS 405 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcCC
Confidence 589999999999999999999999999999987643 1223344565421 2
Q ss_pred HHhhhcCCcEEEEccCCh
Q 037949 113 REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 113 ~~~~~~~aDvvi~a~G~~ 130 (243)
.++...++|.|+.++|..
T Consensus 406 ~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 406 LESLLEDYDAVFVGVGTY 423 (654)
T ss_pred HHHHHhcCCEEEEeCCCC
Confidence 233345799999999863
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0014 Score=60.44 Aligned_cols=81 Identities=15% Similarity=0.145 Sum_probs=60.8
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhC-CCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhc---ccHHH
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAV-GARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADI---IMVRH 137 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~-Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~---i~~~~ 137 (243)
.-.+|+|+|. |-||..+|+.++.. |.+|+.+|+++.. ..++.+.+.++|+|+-|+....+ +. +.
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~----------~~~~~~~v~~aDlVilavPv~~~~~~l~-~l 71 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG----------SLDPATLLQRADVLIFSAPIRHTAALIE-EY 71 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc----------cCCHHHHhcCCCEEEEeCCHHHHHHHHH-HH
Confidence 4578999999 99999999999964 7899999885321 22456677899999999865433 32 22
Q ss_pred Hc---cCCCCeEEEEecCCC
Q 037949 138 MK---QMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~---~l~~g~~vvnvg~~~ 154 (243)
.. .++++++|..+|...
T Consensus 72 ~~~~~~l~~~~iVtDVgSvK 91 (370)
T PRK08818 72 VALAGGRAAGQLWLDVTSIK 91 (370)
T ss_pred hhhhcCCCCCeEEEECCCCc
Confidence 22 268999999999876
|
|
| >cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0026 Score=55.60 Aligned_cols=107 Identities=10% Similarity=0.055 Sum_probs=78.3
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCC-----------EEEEEeCCc-----------hhHHHHh--hcCCcccCHH
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGA-----------RVMGTEIDL-----------ICALQAL--TEGIPVLTRE 114 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-----------~V~v~d~~~-----------~r~~~a~--~~G~~~~~~~ 114 (243)
+..+.+.+++++|+|.-|.++|..+...+. +++++|... .+...+. ...-+..++.
T Consensus 20 g~~l~d~riv~~GAGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~~~~~~~L~ 99 (254)
T cd00762 20 KKKISEHKVLFNGAGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFANPERESGDLE 99 (254)
T ss_pred CCChhhcEEEEECcCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHcCcccccCCHH
Confidence 446789999999999999999999988776 588887642 1121111 1111234688
Q ss_pred hhhc--CCcEEEEccCChhcccHHHHccCC---CCeEEEEecCCCC--CCChhHHHHh
Q 037949 115 DVVS--EAGLFVTTTENADIIMVRHMKQMK---NAAIVCNIGHFDN--EIDMLDLEAY 165 (243)
Q Consensus 115 ~~~~--~aDvvi~a~G~~~~i~~~~l~~l~---~g~~vvnvg~~~~--~id~~~l~~~ 165 (243)
++++ ++|+++-+++.+++++.+.++.|. +.-+|.-.+-... |+..++...|
T Consensus 100 eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tpe~a~~~ 157 (254)
T cd00762 100 DAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALSNPTSKAECTAEEAYTA 157 (254)
T ss_pred HHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECCCcCCccccCHHHHHhh
Confidence 8888 999999999888999999999997 7777776665543 6777766665
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut |
| >TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00095 Score=66.40 Aligned_cols=84 Identities=15% Similarity=0.102 Sum_probs=55.9
Q ss_pred cEEEEEcCChHHHHHHHHHH-hCCCEEEEEeCCchhHHHHhh-----------cCC-------------cccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALK-AVGARVMGTEIDLICALQALT-----------EGI-------------PVLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~-~~Ga~V~v~d~~~~r~~~a~~-----------~G~-------------~~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+. ..|.+|+++|++++.+..+.. .|. ...+.-+.+++
T Consensus 305 ~~v~ViGaG~mG~~iA~~~a~~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 384 (699)
T TIGR02440 305 KKVGILGGGLMGGGIASVTATKAGIPVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITGTTDYRGFKD 384 (699)
T ss_pred cEEEEECCcHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEEeCChHHhcc
Confidence 68999999999999999987 489999999999876544321 111 00011134679
Q ss_pred CcEEEEccCCh-----hcccHHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTENA-----DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vvn 149 (243)
||+|+||..-. .++ .+.-+.+++++++..
T Consensus 385 adlViEav~E~l~~K~~v~-~~l~~~~~~~~ilas 418 (699)
T TIGR02440 385 VDIVIEAVFEDLALKHQMV-KDIEQECAAHTIFAS 418 (699)
T ss_pred CCEEEEeccccHHHHHHHH-HHHHhhCCCCcEEEe
Confidence 99999996421 222 222344577777763
|
Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog. |
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0011 Score=56.99 Aligned_cols=37 Identities=32% Similarity=0.566 Sum_probs=33.1
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.++||+++|+|+. .||..+++.+...|++|+++++++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~ 44 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE 44 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc
Confidence 3679999999987 899999999999999999887754
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0015 Score=55.66 Aligned_cols=40 Identities=30% Similarity=0.405 Sum_probs=35.3
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++++++|+|+ |.||+.+++.+...|++|+++++++.+..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~ 42 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAA 42 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 46799999996 59999999999999999999999877653
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00062 Score=66.81 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=55.6
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--CH--Hh-----hhcCCcEEEEccCChh
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--TR--ED-----VVSEAGLFVTTTENAD 131 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~~--~~-----~~~~aDvvi~a~G~~~ 131 (243)
.++|+|+|+|.+|+.+++.|+..|.+++++|.|+.+.+.+++.|+++. |. .+ -++++|.++.++.+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~ 476 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQ 476 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHH
Confidence 468999999999999999999999999999999999888887787542 11 11 2458999999987754
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0013 Score=55.54 Aligned_cols=40 Identities=33% Similarity=0.268 Sum_probs=35.1
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.+++++|+|+ |.||+.+++.|...|++|+++++++.++.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~ 44 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELE 44 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHH
Confidence 46899999997 59999999999999999999999887643
|
|
| >TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00076 Score=67.45 Aligned_cols=84 Identities=12% Similarity=0.085 Sum_probs=57.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-c-------------ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-P-------------VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~-------------~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|++++.++.+.. .|. . +.+. +.+.+
T Consensus 336 ~~v~ViGaG~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 414 (737)
T TIGR02441 336 KTLAVLGAGLMGAGIAQVSVDKGLKTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTPTLDY-SGFKN 414 (737)
T ss_pred cEEEEECCCHhHHHHHHHHHhCCCcEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCH-HHhcc
Confidence 68999999999999999999999999999999987654321 110 0 0011 24578
Q ss_pred CcEEEEccCC----hhcccHHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTEN----ADIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~----~~~i~~~~l~~l~~g~~vvn 149 (243)
+|+||||.-- +..+-.+.-..+++++++..
T Consensus 415 aDlViEAv~E~l~~K~~vf~~l~~~~~~~~ilas 448 (737)
T TIGR02441 415 ADMVIEAVFEDLSLKHKVIKEVEAVVPPHCIIAS 448 (737)
T ss_pred CCeehhhccccHHHHHHHHHHHHhhCCCCcEEEE
Confidence 9999999632 21122222345688888873
|
Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16). |
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0003 Score=59.98 Aligned_cols=36 Identities=31% Similarity=0.383 Sum_probs=32.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 65 KIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 65 ~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
++++|+|+ |.||+.+++.+...|++|+++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~ 38 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERL 38 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 68999996 5999999999999999999999988754
|
|
| >COG0281 SfcA Malic enzyme [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0025 Score=59.01 Aligned_cols=122 Identities=17% Similarity=0.190 Sum_probs=84.3
Q ss_pred Hhhhccccchhhhhhh---hccccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeCCch----h---------HH
Q 037949 41 DNLYGFRHSLPDGLMR---ATDITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEIDLI----C---------AL 101 (243)
Q Consensus 41 ~~~~~~~~~~~~av~~---~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~~~----r---------~~ 101 (243)
|..+|++.....++.. ..+..++..++++.|+|.-|.+++..+++.|+ +|+++|+... | ..
T Consensus 173 DDqqGTaiv~lA~llnalk~~gk~l~d~kiv~~GAGAAgiaia~~l~~~g~~~~~i~~~D~~G~l~~~r~~~~~~~~k~~ 252 (432)
T COG0281 173 DDQQGTAIVTLAALLNALKLTGKKLKDQKIVINGAGAAGIAIADLLVAAGVKEENIFVVDRKGLLYDGREDLTMNQKKYA 252 (432)
T ss_pred ccccHHHHHHHHHHHHHHHHhCCCccceEEEEeCCcHHHHHHHHHHHHhCCCcccEEEEecCCcccCCCcccccchHHHH
Confidence 3445666555444432 23456788999999999999999999999999 5999887522 1 11
Q ss_pred HHh-hcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHh
Q 037949 102 QAL-TEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAY 165 (243)
Q Consensus 102 ~a~-~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~ 165 (243)
.+. ..+.. .. ++.+.++|+++-|++. ++++.+.++.|.+..+|.-.+-...|+..+....|
T Consensus 253 ~a~~~~~~~-~~-~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfalaNP~pEi~Pe~a~~~ 314 (432)
T COG0281 253 KAIEDTGER-TL-DLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALANPTPEITPEDAKEW 314 (432)
T ss_pred HHHhhhccc-cc-cccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecCCCCccCCHHHHhhc
Confidence 111 11100 10 3466799999999988 88999999999888777766655566777766654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0015 Score=55.93 Aligned_cols=37 Identities=24% Similarity=0.204 Sum_probs=32.7
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+++++|+|++ .||+.+++.|...|++|+++++++...
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~ 39 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQV 39 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 5789999985 899999999999999999998887644
|
|
| >COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0011 Score=59.42 Aligned_cols=87 Identities=24% Similarity=0.287 Sum_probs=57.8
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-c------c---cC-HHh--hhcC
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-P------V---LT-RED--VVSE 119 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~------~---~~-~~~--~~~~ 119 (243)
-++|.|+|+|.+|.++|..+...|.+|++.|++++.+..+.. .|. . . +. ..+ .+++
T Consensus 3 i~kv~ViGaG~MG~gIA~~~A~~G~~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~~~l~~ 82 (307)
T COG1250 3 IKKVAVIGAGVMGAGIAAVFALAGYDVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDLAALKD 82 (307)
T ss_pred ccEEEEEcccchhHHHHHHHhhcCCceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCchhHhcc
Confidence 478999999999999999999977999999999775543321 121 0 0 00 111 4678
Q ss_pred CcEEEEccCCh-----hcccHHHHccCCCCeEEE-Eec
Q 037949 120 AGLFVTTTENA-----DIIMVRHMKQMKNAAIVC-NIG 151 (243)
Q Consensus 120 aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vv-nvg 151 (243)
||+|+|+.--. .++. +.=..+++++++. |++
T Consensus 83 ~DlVIEAv~E~levK~~vf~-~l~~~~~~~aIlASNTS 119 (307)
T COG1250 83 ADLVIEAVVEDLELKKQVFA-ELEALAKPDAILASNTS 119 (307)
T ss_pred CCEEEEeccccHHHHHHHHH-HHHhhcCCCcEEeeccC
Confidence 99999996432 2232 2234447888887 443
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0012 Score=61.83 Aligned_cols=68 Identities=22% Similarity=0.267 Sum_probs=48.3
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhH----HHHhhcCCccc---CHHhhhc-CCcEEEEccCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICA----LQALTEGIPVL---TREDVVS-EAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~----~~a~~~G~~~~---~~~~~~~-~aDvvi~a~G~ 129 (243)
+.|++++|+|.|++|+++|+.|+..|++|+++|.++... ......|.++. ...+... +.|+||..+|.
T Consensus 3 ~~~k~v~v~G~g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi 78 (447)
T PRK02472 3 YQNKKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLELLDEDFDLMVKNPGI 78 (447)
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHHhcCcCCEEEECCCC
Confidence 468999999999999999999999999999999765321 11223465432 1223333 38999887654
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0015 Score=55.59 Aligned_cols=86 Identities=17% Similarity=0.210 Sum_probs=56.9
Q ss_pred EEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh--------cCCc----ccCHHhhhcCCcEEEEccCChhc
Q 037949 66 IAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALT--------EGIP----VLTREDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 66 ~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~--------~G~~----~~~~~~~~~~aDvvi~a~G~~~~ 132 (243)
++.|+| +|.+|..++..+...|.+|+++++++++...... .|+. ..+..+.+..+|+|+.|+.....
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~~~ 81 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWDHV 81 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHHHH
Confidence 589997 8999999999999999999999999876533222 1221 12445667899999999765432
Q ss_pred ccH-HHHccCCCCeEEEEec
Q 037949 133 IMV-RHMKQMKNAAIVCNIG 151 (243)
Q Consensus 133 i~~-~~l~~l~~g~~vvnvg 151 (243)
-.. +.+.....+.+|+++.
T Consensus 82 ~~~l~~l~~~l~~~vvI~~~ 101 (219)
T TIGR01915 82 LKTLESLRDELSGKLVISPV 101 (219)
T ss_pred HHHHHHHHHhccCCEEEEec
Confidence 110 1132112345677653
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0007 Score=66.19 Aligned_cols=86 Identities=17% Similarity=0.104 Sum_probs=62.7
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C---H---Hhh-hcCCcEEEEccCChhcc-
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T---R---EDV-VSEAGLFVTTTENADII- 133 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~---~---~~~-~~~aDvvi~a~G~~~~i- 133 (243)
..+++|+|+|++|+.+++.|...|.+++++|.|+++.+.+.+.|..+. | . +++ +++||.++.+++++..-
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n~ 479 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDTM 479 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHHH
Confidence 368999999999999999999999999999999999888887786542 1 1 111 46899999998775421
Q ss_pred -cHHHHccCCCCeEEEE
Q 037949 134 -MVRHMKQMKNAAIVCN 149 (243)
Q Consensus 134 -~~~~l~~l~~g~~vvn 149 (243)
-....+...|...++.
T Consensus 480 ~i~~~~r~~~p~~~Iia 496 (601)
T PRK03659 480 KIVELCQQHFPHLHILA 496 (601)
T ss_pred HHHHHHHHHCCCCeEEE
Confidence 0122344455655554
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0015 Score=58.97 Aligned_cols=84 Identities=20% Similarity=0.190 Sum_probs=57.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-----------------cCHHhhhcCCcEEEEcc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-----------------LTREDVVSEAGLFVTTT 127 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-----------------~~~~~~~~~aDvvi~a~ 127 (243)
.++.|+|+|.||..+|..+...|.+|+++|+++.. +.....|..+ .+..+....+|+|+.|+
T Consensus 3 mkI~IiG~G~mG~~~A~~L~~~G~~V~~~~r~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vil~v 81 (341)
T PRK08229 3 ARICVLGAGSIGCYLGGRLAAAGADVTLIGRARIG-DELRAHGLTLTDYRGRDVRVPPSAIAFSTDPAALATADLVLVTV 81 (341)
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCcEEEEecHHHH-HHHHhcCceeecCCCcceecccceeEeccChhhccCCCEEEEEe
Confidence 46999999999999999999999999999987542 2333344321 11123456899999997
Q ss_pred CChhc---ccHHHHccCCCCeEEEEe
Q 037949 128 ENADI---IMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 128 G~~~~---i~~~~l~~l~~g~~vvnv 150 (243)
..... +. +....++++.+++..
T Consensus 82 k~~~~~~~~~-~l~~~~~~~~iii~~ 106 (341)
T PRK08229 82 KSAATADAAA-ALAGHARPGAVVVSF 106 (341)
T ss_pred cCcchHHHHH-HHHhhCCCCCEEEEe
Confidence 65432 32 233445777777765
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0017 Score=57.47 Aligned_cols=83 Identities=14% Similarity=0.114 Sum_probs=55.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc--------------cCHHhhhcCCcEEEEccCChh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV--------------LTREDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~--------------~~~~~~~~~aDvvi~a~G~~~ 131 (243)
+++|+|+|.||..+|..|...|.+|+++++ +++.+.....|..+ .+.++....+|+++.|+.+..
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~~ 80 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAYQ 80 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEecccC
Confidence 589999999999999999999999999998 66554444444321 112333468999999976533
Q ss_pred ---cccHHHHccCCCCeEEEEe
Q 037949 132 ---IIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 132 ---~i~~~~l~~l~~g~~vvnv 150 (243)
++. ..-..++++..++++
T Consensus 81 ~~~~~~-~l~~~~~~~~~ii~~ 101 (305)
T PRK12921 81 LDAAIP-DLKPLVGEDTVIIPL 101 (305)
T ss_pred HHHHHH-HHHhhcCCCCEEEEe
Confidence 221 222334566667654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0011 Score=56.23 Aligned_cols=39 Identities=33% Similarity=0.281 Sum_probs=34.8
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+++++++|+|+ |.||+.+++.+...|++|+++++++.++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~ 44 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEA 44 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 57899999997 5999999999999999999998887654
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0017 Score=54.99 Aligned_cols=36 Identities=19% Similarity=0.111 Sum_probs=31.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 66 IAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 66 ~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++|+|+ |.||+.+++.+...|++|+++++++.++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~ 38 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLE 38 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 5899998 49999999999999999999999877653
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0033 Score=57.51 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=54.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----cCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV-----SEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~-----~~aDvvi~a~G 128 (243)
..+|+.|+|+|++ .+|..+.+.++..|+.++++..+.+..+..+++|++ +++ ..+.+ .+.|+|++|.|
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg 234 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVG 234 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCC
Confidence 4689999999987 999999999999997666666677777788888975 333 22222 25999999998
Q ss_pred Chh
Q 037949 129 NAD 131 (243)
Q Consensus 129 ~~~ 131 (243)
...
T Consensus 235 ~~~ 237 (347)
T KOG1198|consen 235 GST 237 (347)
T ss_pred CCc
Confidence 753
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0015 Score=56.18 Aligned_cols=37 Identities=27% Similarity=0.367 Sum_probs=33.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+.+++++|+|+. .||+.+++.|...|++|+++++++.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~ 41 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE 41 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH
Confidence 578999999976 8999999999999999999988764
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0004 Score=59.69 Aligned_cols=36 Identities=19% Similarity=0.040 Sum_probs=31.3
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++++|+|++ +||+.+|+.+. .|++|+++++++.++.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~ 37 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQ 37 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHH
Confidence 478999987 89999999998 5999999999877653
|
|
| >TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0019 Score=58.59 Aligned_cols=83 Identities=22% Similarity=0.183 Sum_probs=56.8
Q ss_pred EEEEcCChHHHHHHHHHHhC-CCEEE-EEeCCchhHHH-HhhcCCcc-------------------cCHHhhhcCCcEEE
Q 037949 67 AVDCGHGDVGRGCAAALKAV-GARVM-GTEIDLICALQ-ALTEGIPV-------------------LTREDVVSEAGLFV 124 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~-Ga~V~-v~d~~~~r~~~-a~~~G~~~-------------------~~~~~~~~~aDvvi 124 (243)
|+|+|+|.||+.+++.+... +++|+ +.|.++.+... +...|++. -++++++.++|+|+
T Consensus 1 VaInG~GrIGr~varav~~~~d~elVaVnD~~~~~~a~lA~~lgyds~~~~~~~~~~~~~~~l~v~g~~eeLl~~vDiVv 80 (333)
T TIGR01546 1 VGVNGYGTIGKRVADAVTKQDDMKLVGVTKTSPDFEAYRAKELGIPVYAASEEFIPRFEEAGIEVAGTLEDLLEKVDIVV 80 (333)
T ss_pred CEEECCcHHHHHHHHHHhhCCCcEEEEEecCChHHHHHHHHHhCCCEEeecCCcceEeccCceEecCCHHHHhhcCCEEE
Confidence 58999999999999997754 46654 46877765322 22334432 12456677899999
Q ss_pred EccCC-hhcccHHHHccCCCCeEEEE
Q 037949 125 TTTEN-ADIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 125 ~a~G~-~~~i~~~~l~~l~~g~~vvn 149 (243)
+|+|. .+..+.+.+..++.+.+++.
T Consensus 81 e~Tp~~~~~~na~~~~~~GakaVl~~ 106 (333)
T TIGR01546 81 DATPGGIGAKNKPLYEKAGVKAIFQG 106 (333)
T ss_pred ECCCCCCChhhHHHHHhCCcCEEEEC
Confidence 99975 35566677777777776654
|
All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's. |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0028 Score=55.42 Aligned_cols=90 Identities=21% Similarity=0.149 Sum_probs=68.3
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC----HHhh----h--cCCcEEEEccC
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT----REDV----V--SEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~----~--~~aDvvi~a~G 128 (243)
..+|++++|.| .|++|+.+++.++.+|++|++++.+ .+...+...|.+ +.+ ..+. . .+.|++++|+|
T Consensus 142 ~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~ 220 (326)
T cd08272 142 VQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVG 220 (326)
T ss_pred CCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchhHHHHHHHhcCCCCCcEEEECCC
Confidence 35799999999 5899999999999999999988877 666666556653 221 1111 1 25899999988
Q ss_pred ChhcccHHHHccCCCCeEEEEecCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
... +. ..++.+++++.++..|..
T Consensus 221 ~~~-~~-~~~~~l~~~g~~v~~~~~ 243 (326)
T cd08272 221 GET-LD-ASFEAVALYGRVVSILGG 243 (326)
T ss_pred hHH-HH-HHHHHhccCCEEEEEecC
Confidence 754 43 478899999999988765
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0012 Score=55.68 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=33.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~ 96 (243)
.+..++|+|+|+|++|..+++.|...|. +++++|.|
T Consensus 18 kl~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 18 RLLNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred HhcCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 3678999999999999999999999998 89999887
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0012 Score=62.00 Aligned_cols=36 Identities=31% Similarity=0.465 Sum_probs=32.6
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++|++++|+|+ |.||+.+++.+...|++|+++++.+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~ 244 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA 244 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999998 6999999999999999999998743
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00039 Score=60.49 Aligned_cols=36 Identities=31% Similarity=0.294 Sum_probs=31.9
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
++++|+|++ .||+.+++.+...|++|+++++++..+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~ 37 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGL 37 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 479999976 999999999999999999999887654
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0017 Score=56.54 Aligned_cols=38 Identities=26% Similarity=0.260 Sum_probs=33.6
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++|+|+. .||+.+++.+...|++|++.++++..+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~ 40 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATL 40 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 36899999975 999999999999999999999987654
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0016 Score=55.47 Aligned_cols=39 Identities=36% Similarity=0.569 Sum_probs=34.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
++|++++|+|+. .||..+++.+...|++|+++++++...
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~ 42 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA 42 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHH
Confidence 578999999985 999999999999999999998887654
|
|
| >PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0027 Score=55.50 Aligned_cols=107 Identities=16% Similarity=0.105 Sum_probs=74.9
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhC----CC-------EEEEEeCCc-----------hhHHHHhhcCC--cccCHH
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAV----GA-------RVMGTEIDL-----------ICALQALTEGI--PVLTRE 114 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~----Ga-------~V~v~d~~~-----------~r~~~a~~~G~--~~~~~~ 114 (243)
+..+.+.+++++|+|.-|.+++..+... |. +++++|.+. .+...+....- ...++.
T Consensus 20 g~~l~d~riv~~GAGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~~L~ 99 (255)
T PF03949_consen 20 GKKLSDQRIVFFGAGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTNPEKDWGSLL 99 (255)
T ss_dssp TS-GGG-EEEEEB-SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSSTTT--SSHH
T ss_pred CCCHHHcEEEEeCCChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCcccccccCHH
Confidence 4468999999999999999999988888 98 488888752 12222322211 124688
Q ss_pred hhhcCC--cEEEEccCChhcccHHHHccCCC---CeEEEEecCCCC--CCChhHHHHh
Q 037949 115 DVVSEA--GLFVTTTENADIIMVRHMKQMKN---AAIVCNIGHFDN--EIDMLDLEAY 165 (243)
Q Consensus 115 ~~~~~a--Dvvi~a~G~~~~i~~~~l~~l~~---g~~vvnvg~~~~--~id~~~l~~~ 165 (243)
++++++ |+++-++|.+++++.+.++.|.+ .-+|.-.+-... |+...+...|
T Consensus 100 eav~~~kPtvLIG~S~~~g~ft~evv~~Ma~~~erPIIF~LSNPt~~aE~~peda~~~ 157 (255)
T PF03949_consen 100 EAVKGAKPTVLIGLSGQGGAFTEEVVRAMAKHNERPIIFPLSNPTPKAECTPEDAYEW 157 (255)
T ss_dssp HHHHCH--SEEEECSSSTTSS-HHHHHHCHHHSSSEEEEE-SSSCGGSSS-HHHHHHT
T ss_pred HHHHhcCCCEEEEecCCCCcCCHHHHHHHhccCCCCEEEECCCCCCcccCCHHHHHhh
Confidence 888877 99999999999999999999976 777777666653 7777777666
|
g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B .... |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0016 Score=58.35 Aligned_cols=88 Identities=19% Similarity=0.152 Sum_probs=59.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhh-c-------CCc--cc-CHHhhhcCCcEEEEccCChh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQALT-E-------GIP--VL-TREDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~-~-------G~~--~~-~~~~~~~~aDvvi~a~G~~~ 131 (243)
++|+|+|+|.+|..+|..+...|. +|+++|+++.++..... . +.. +. ...+.+.++|+|+.|+|.+.
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~~ 80 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAPQ 80 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCCC
Confidence 479999999999999999999995 79999998876432211 1 111 11 12234689999999988631
Q ss_pred ---------------cccH--HHHccCCCCeEEEEecC
Q 037949 132 ---------------IIMV--RHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 132 ---------------~i~~--~~l~~l~~g~~vvnvg~ 152 (243)
++.. +.+....+.+++++++-
T Consensus 81 ~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN 118 (306)
T cd05291 81 KPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN 118 (306)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 1110 12445577899998873
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0013 Score=55.96 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=29.7
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-eCCc
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGT-EIDL 97 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d~~~ 97 (243)
++|+++|+|+. .||+.+|+.|...|++|++. +.++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~ 38 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS 38 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh
Confidence 57999999975 99999999999999998874 4343
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.002 Score=54.45 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=30.4
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeC
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
++|++++|+|+ |.||+.+++.+...|++|+++.+
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~ 38 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYA 38 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence 57899999997 59999999999999999988754
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00034 Score=62.47 Aligned_cols=38 Identities=24% Similarity=0.249 Sum_probs=32.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
..++|.|+|+|+= +-|+.+|+.+...|.+|.+.=.+++
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ 64 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEE 64 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCc
Confidence 4678999999998 9999999999999999988534443
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00047 Score=59.10 Aligned_cols=39 Identities=26% Similarity=0.324 Sum_probs=32.9
Q ss_pred ccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.||+|+|+| +|+||+.+.+.|...|+.+.++|-+.+..
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~ 42 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP 42 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH
Confidence 5699999998 67999999999999999888876665543
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0017 Score=55.90 Aligned_cols=37 Identities=24% Similarity=0.347 Sum_probs=32.8
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+++++|+|+ |.||+.+++.+...|++|+++++++...
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~ 38 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRL 38 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 468999998 5999999999999999999999987654
|
|
| >PRK06928 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.004 Score=54.97 Aligned_cols=97 Identities=9% Similarity=-0.023 Sum_probs=61.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC----CEEEEEeCCchh-HHHHhh-c-CCc-ccCHHhhhcCCcEEEEccCChhccc--
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG----ARVMGTEIDLIC-ALQALT-E-GIP-VLTREDVVSEAGLFVTTTENADIIM-- 134 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G----a~V~v~d~~~~r-~~~a~~-~-G~~-~~~~~~~~~~aDvvi~a~G~~~~i~-- 134 (243)
.++.|+|+|.+|..++..+...| .+|+++++++.. ...... . +.. ..+..+.+.++|+||.|+.......
T Consensus 2 ~~I~iIG~G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavpp~~~~~vl 81 (277)
T PRK06928 2 EKIGFIGYGSMADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVPPLAVLPLL 81 (277)
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecCHHHHHHHH
Confidence 36999999999999999999888 579988886532 222222 2 222 2345667789999999976433211
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+....++++..++++.-+ ++.+.+..
T Consensus 82 ~~l~~~l~~~~~ivS~~aG---i~~~~l~~ 108 (277)
T PRK06928 82 KDCAPVLTPDRHVVSIAAG---VSLDDLLE 108 (277)
T ss_pred HHHHhhcCCCCEEEEECCC---CCHHHHHH
Confidence 1112334567677765433 45555544
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0026 Score=57.56 Aligned_cols=68 Identities=18% Similarity=0.159 Sum_probs=48.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHH-HHhh-------cCC--ccc--CHHhhhcCCcEEEEccC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICAL-QALT-------EGI--PVL--TREDVVSEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~-~a~~-------~G~--~~~--~~~~~~~~aDvvi~a~G 128 (243)
.+.++|.|+|+|.+|..+|..+...|. +|+++|+++.++. .+.+ .+. .+. +-.+.+++||+|+.+.|
T Consensus 4 ~~~~KI~IIGaG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~~~l~~aDiVI~tag 83 (321)
T PTZ00082 4 IKRRKISLIGSGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNYEDIAGSDVVIVTAG 83 (321)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCHHHhCCCCEEEECCC
Confidence 345799999999999999999999995 9999999988531 1111 111 111 11246789999999876
Q ss_pred C
Q 037949 129 N 129 (243)
Q Consensus 129 ~ 129 (243)
.
T Consensus 84 ~ 84 (321)
T PTZ00082 84 L 84 (321)
T ss_pred C
Confidence 4
|
|
| >PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0016 Score=64.86 Aligned_cols=83 Identities=14% Similarity=0.076 Sum_probs=57.5
Q ss_pred cEEEEEcCChHHHHHHHHHH-hCCCEEEEEeCCchhHHHHhh-----------cCC-c------------c-cCHHhhhc
Q 037949 65 KIAVDCGHGDVGRGCAAALK-AVGARVMGTEIDLICALQALT-----------EGI-P------------V-LTREDVVS 118 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~-~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~------------~-~~~~~~~~ 118 (243)
++|.|+|+|.+|..+|..+. ..|.+|+++|++++.+..+.. .|. . . .+. +.++
T Consensus 310 ~~v~ViGaG~mG~giA~~~a~~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 388 (708)
T PRK11154 310 NKVGVLGGGLMGGGIAYVTATKAGLPVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISGTTDY-RGFK 388 (708)
T ss_pred cEEEEECCchhhHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEEeCCh-HHhc
Confidence 78999999999999999988 789999999999886544321 121 0 0 011 3457
Q ss_pred CCcEEEEccCC----h-hcccHHHHccCCCCeEEEE
Q 037949 119 EAGLFVTTTEN----A-DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 119 ~aDvvi~a~G~----~-~~i~~~~l~~l~~g~~vvn 149 (243)
++|+||||..- + .++ .+.=+.+++++++..
T Consensus 389 ~aDlViEav~E~~~~K~~v~-~~le~~~~~~~ilas 423 (708)
T PRK11154 389 HADVVIEAVFEDLALKQQMV-AEVEQNCAPHTIFAS 423 (708)
T ss_pred cCCEEeecccccHHHHHHHH-HHHHhhCCCCcEEEE
Confidence 99999999642 1 223 222345688888874
|
|
| >PRK06199 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0022 Score=59.28 Aligned_cols=92 Identities=20% Similarity=0.101 Sum_probs=66.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHh-C-CC-EEEEEeCCchhHHHHh-----hc-CC-c---ccCHHhhhcCCcEEEEccCCh
Q 037949 64 GKIAVDCGHGDVGRGCAAALKA-V-GA-RVMGTEIDLICALQAL-----TE-GI-P---VLTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~-~-Ga-~V~v~d~~~~r~~~a~-----~~-G~-~---~~~~~~~~~~aDvvi~a~G~~ 130 (243)
-++++|+|+|..++..++.+.. + .. +|.++++++.+..... .. +. + +.+.++++.+||+|+.||.+.
T Consensus 155 a~~l~iiG~G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s~ 234 (379)
T PRK06199 155 SKVVGLLGPGVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSGE 234 (379)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCCC
Confidence 4899999999999999888876 4 35 8999999998754322 11 22 2 235788899999999987532
Q ss_pred -------hcccHHHHccCCCCeEEEEecCCCCCCChh
Q 037949 131 -------DIIMVRHMKQMKNAAIVCNIGHFDNEIDML 160 (243)
Q Consensus 131 -------~~i~~~~l~~l~~g~~vvnvg~~~~~id~~ 160 (243)
+++.. +.+++|..|+.+|.. ++|..
T Consensus 235 ~~~~s~~Pv~~~---~~lkpG~hv~~ig~~--eld~~ 266 (379)
T PRK06199 235 TGDPSTYPYVKR---EWVKPGAFLLMPAAC--RIDEG 266 (379)
T ss_pred CCCCCcCcEecH---HHcCCCcEEecCCcc--cCCHH
Confidence 45543 467899999887764 45533
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00048 Score=55.00 Aligned_cols=32 Identities=34% Similarity=0.360 Sum_probs=28.4
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCC-EEEEEeCC
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGA-RVMGTEID 96 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga-~V~v~d~~ 96 (243)
|+++|+|++ +||+.+++.+...|+ +|+++.++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~ 34 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRS 34 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec
Confidence 689999977 999999999999988 67778887
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0015 Score=64.72 Aligned_cols=40 Identities=35% Similarity=0.488 Sum_probs=36.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.++
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~ 451 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAA 451 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 4679999999985 899999999999999999999987654
|
|
| >PRK13301 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0019 Score=56.79 Aligned_cols=87 Identities=11% Similarity=-0.040 Sum_probs=55.6
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC---CE-EEEEeCCchhHHHHhhcCCcc-cCHHhh-hcCCcEEEEccCChhcccHHHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG---AR-VMGTEIDLICALQALTEGIPV-LTREDV-VSEAGLFVTTTENADIIMVRHM 138 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G---a~-V~v~d~~~~r~~~a~~~G~~~-~~~~~~-~~~aDvvi~a~G~~~~i~~~~l 138 (243)
.+|+|+|||.||..+++.+...+ ++ +.++++++.+.... .....+ .++++. ....|+|+||.+...+- +-..
T Consensus 3 ~rvgiIG~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~-~~~~~~~~~l~~ll~~~~DlVVE~A~~~av~-e~~~ 80 (267)
T PRK13301 3 HRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPAL-AGRVALLDGLPGLLAWRPDLVVEAAGQQAIA-EHAE 80 (267)
T ss_pred eEEEEECccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHh-hccCcccCCHHHHhhcCCCEEEECCCHHHHH-HHHH
Confidence 57999999999999999987543 44 45577777554222 222333 357775 46899999998765432 2344
Q ss_pred ccCCCCeEEEEecCC
Q 037949 139 KQMKNAAIVCNIGHF 153 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~ 153 (243)
..++.|.-++..+.+
T Consensus 81 ~iL~~g~dlvv~SvG 95 (267)
T PRK13301 81 GCLTAGLDMIICSAG 95 (267)
T ss_pred HHHhcCCCEEEEChh
Confidence 555555555544443
|
|
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0036 Score=54.15 Aligned_cols=92 Identities=14% Similarity=0.113 Sum_probs=69.0
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~ 127 (243)
..+|++++|.| .|.+|+.+++.++++|++|++++.++.+...+...|.+ +++ ..+. . .++|++++++
T Consensus 118 ~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~ 197 (303)
T cd08251 118 LAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTL 197 (303)
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECC
Confidence 45799999976 56999999999999999999998888777666666753 221 1111 1 3689999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.. .+. ..++.++++|.+++.|..+
T Consensus 198 ~~~-~~~-~~~~~l~~~g~~v~~~~~~ 222 (303)
T cd08251 198 SGE-AIQ-KGLNCLAPGGRYVEIAMTA 222 (303)
T ss_pred cHH-HHH-HHHHHhccCcEEEEEeccC
Confidence 653 343 4688899999999987653
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0011 Score=47.18 Aligned_cols=34 Identities=29% Similarity=0.176 Sum_probs=31.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+++|+|+|.+|..+|..++.+|.+|+++++++.-
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 5899999999999999999999999999988763
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0036 Score=53.77 Aligned_cols=68 Identities=9% Similarity=0.043 Sum_probs=49.0
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCC---CE-EEEEeC-CchhHHHHhh-cCCcc-cCHHhhhcCCcEEEEccCCh
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVG---AR-VMGTEI-DLICALQALT-EGIPV-LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~G---a~-V~v~d~-~~~r~~~a~~-~G~~~-~~~~~~~~~aDvvi~a~G~~ 130 (243)
+..+++|+|+|.+|..++..+...| .+ ++++++ ++.+...... .+... .+.++.++++|+|+.|+...
T Consensus 3 ~~~kI~iIG~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~~ 77 (245)
T PRK07634 3 KKHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPPS 77 (245)
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCHH
Confidence 4578999999999999999998776 23 667776 4555444333 45543 35667788999999997653
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0022 Score=55.14 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=29.4
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
+|+++|+|+. .||+.+++.+...|++|+++..+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~ 35 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHS 35 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999987 89999999999999999887543
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0018 Score=52.65 Aligned_cols=61 Identities=20% Similarity=0.211 Sum_probs=48.3
Q ss_pred EEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-----cCH---HhhhcCCcEEEEccCC
Q 037949 67 AVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-----LTR---EDVVSEAGLFVTTTEN 129 (243)
Q Consensus 67 vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-----~~~---~~~~~~aDvvi~a~G~ 129 (243)
|+|+|+ |.+|..+++.|...|.+|++.-+++.+... ..++++ .+. .+++.++|+|+.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 689997 899999999999999999999999887654 334332 222 4457799999999873
|
... |
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0022 Score=55.11 Aligned_cols=38 Identities=26% Similarity=0.232 Sum_probs=33.4
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
|+++|+|++ .||+.+++.+...|++|+++++++..+..
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~ 40 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAA 40 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 689999975 89999999999999999999998876533
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00086 Score=60.56 Aligned_cols=89 Identities=17% Similarity=0.154 Sum_probs=60.0
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHH-Hhh-------cCC--cc---cCHHhhhcCCcEEEEcc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQ-ALT-------EGI--PV---LTREDVVSEAGLFVTTT 127 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~-a~~-------~G~--~~---~~~~~~~~~aDvvi~a~ 127 (243)
.+.++|.|+|+|.+|..++..+...| ++++++|+++.++.. +.+ .+. .+ .+. +.+++||+|+.+.
T Consensus 3 ~~~~KI~IIGaG~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~-~~l~~ADiVVita 81 (319)
T PTZ00117 3 VKRKKISMIGAGQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY-EDIKDSDVVVITA 81 (319)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH-HHhCCCCEEEECC
Confidence 35679999999999999999999989 699999998865321 111 111 11 122 3678999999998
Q ss_pred CChh---------------cccH--HHHccCCCCeEEEEec
Q 037949 128 ENAD---------------IIMV--RHMKQMKNAAIVCNIG 151 (243)
Q Consensus 128 G~~~---------------~i~~--~~l~~l~~g~~vvnvg 151 (243)
|.+. ++.. +.+....|.+++++++
T Consensus 82 g~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs 122 (319)
T PTZ00117 82 GVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVT 122 (319)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 5421 1111 2345557888888864
|
|
| >PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0046 Score=56.47 Aligned_cols=79 Identities=15% Similarity=0.194 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCchh-----HHHHhhcCCcc-cCHHhhhcCCcEEEEccCChh----cccHHHHccCCCC
Q 037949 75 VGRGCAAALKAVGARVMGTEIDLIC-----ALQALTEGIPV-LTREDVVSEAGLFVTTTENAD----IIMVRHMKQMKNA 144 (243)
Q Consensus 75 IG~~~A~~l~~~Ga~V~v~d~~~~r-----~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~----~i~~~~l~~l~~g 144 (243)
=|..+|..|...|.+|+++|+++.+ .......|+.+ .+..+++.++|+||.|+.... ++. .....++++
T Consensus 31 gG~~MA~~La~aG~~V~v~Dr~~~~l~~~~~~~l~~~Gi~~asd~~eaa~~ADvVIlaVP~~~~v~~Vl~-~L~~~L~~g 109 (342)
T PRK12557 31 GGSRMAIEFAEAGHDVVLAEPNRSILSEELWKKVEDAGVKVVSDDAEAAKHGEIHILFTPFGKKTVEIAK-NILPHLPEN 109 (342)
T ss_pred CHHHHHHHHHhCCCeEEEEECCHHHhhHHHHHHHHHCCCEEeCCHHHHHhCCCEEEEECCCcHHHHHHHH-HHHhhCCCC
Confidence 3788999999999999999998863 33344567653 356677889999999976544 222 345667888
Q ss_pred eEEEEecCCC
Q 037949 145 AIVCNIGHFD 154 (243)
Q Consensus 145 ~~vvnvg~~~ 154 (243)
.++++++...
T Consensus 110 ~IVId~ST~~ 119 (342)
T PRK12557 110 AVICNTCTVS 119 (342)
T ss_pred CEEEEecCCC
Confidence 8999887654
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0017 Score=60.79 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=50.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCccc-----C---HHhh-hcCCcEEEEccCCh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPVL-----T---REDV-VSEAGLFVTTTENA 130 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~~-----~---~~~~-~~~aDvvi~a~G~~ 130 (243)
+++|+|+|.+|+.+++.|...|.+|+++|.++.+...... .|.++. + +.++ +.++|.++.+++..
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~ 76 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSD 76 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCCh
Confidence 6899999999999999999999999999999988755544 444321 1 2233 56899999887654
|
|
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0024 Score=60.64 Aligned_cols=69 Identities=22% Similarity=0.255 Sum_probs=51.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHH-HhhcCCcccC---HHhhhcCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQ-ALTEGIPVLT---REDVVSEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~-a~~~G~~~~~---~~~~~~~aDvvi~a~G~ 129 (243)
.+.+++|+|+|+|..|+++|+.|+..|++|+++|.++..... ....|+.+.. ..+.+.++|+||-..|.
T Consensus 12 ~~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi 84 (473)
T PRK00141 12 QELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQLDSFSLVVTSPGW 84 (473)
T ss_pred cccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHhcCCCEEEeCCCC
Confidence 367899999999999999999999999999999986654322 2234665421 23345678999887664
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0016 Score=51.74 Aligned_cols=82 Identities=12% Similarity=0.116 Sum_probs=54.1
Q ss_pred EEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC--------------HH-hhhcCCcEEEEccCChh
Q 037949 67 AVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT--------------RE-DVVSEAGLFVTTTENAD 131 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~--------------~~-~~~~~aDvvi~a~G~~~ 131 (243)
++|+|+|.||...|..|+..|.+|.++.+.+ +.+.-.+.|..+.. .. .....+|++|.|+-+..
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~~ 79 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAYQ 79 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGGG
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEecccc
Confidence 6899999999999999999999999999988 55444444542211 01 23457999999975533
Q ss_pred ---cccHHHHccCCCCeEEEEe
Q 037949 132 ---IIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 132 ---~i~~~~l~~l~~g~~vvnv 150 (243)
+++ ..-..+.++..++..
T Consensus 80 ~~~~l~-~l~~~~~~~t~iv~~ 100 (151)
T PF02558_consen 80 LEQALQ-SLKPYLDPNTTIVSL 100 (151)
T ss_dssp HHHHHH-HHCTGEETTEEEEEE
T ss_pred hHHHHH-HHhhccCCCcEEEEE
Confidence 232 223444566566543
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0014 Score=58.41 Aligned_cols=93 Identities=17% Similarity=0.268 Sum_probs=71.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc---------------C----------HHh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL---------------T----------RED 115 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~---------------~----------~~~ 115 (243)
..++.+++++|.|-+|+..+...+..|+-|.-.|..+++.++-...|.+.. + ..+
T Consensus 161 tv~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 161 TVSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred cccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999998887655554443211 1 012
Q ss_pred hhcCCcEEEEcc---CC--hhcccHHHHccCCCCeEEEEecCC
Q 037949 116 VVSEAGLFVTTT---EN--ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 116 ~~~~aDvvi~a~---G~--~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+++.|+||++. |. |.+++.++.+.||||.++|.....
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~ 283 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAE 283 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhh
Confidence 346899999874 43 567888999999999999987643
|
|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0028 Score=59.81 Aligned_cols=68 Identities=16% Similarity=0.094 Sum_probs=50.2
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-----HHHHhhcCCccc---CHHhhhcCCcEEEEccCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-----ALQALTEGIPVL---TREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-----~~~a~~~G~~~~---~~~~~~~~aDvvi~a~G~ 129 (243)
+.+++|+|+|+|..|+++|+.|+..|++|.++|.++.. .......|+.+. ...+.+.++|+|+..+|-
T Consensus 12 ~~~~~i~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi 87 (458)
T PRK01710 12 IKNKKVAVVGIGVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSM 87 (458)
T ss_pred hcCCeEEEEcccHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCC
Confidence 46899999999999999999999999999999987531 112334565432 123445678999888764
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0026 Score=54.55 Aligned_cols=39 Identities=23% Similarity=0.267 Sum_probs=34.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCE-EEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGAR-VMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~-V~v~d~~~~r~ 100 (243)
+.+++++|+|+. .||..+++.+...|++ |+++++++...
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~ 44 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG 44 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence 578999999975 8999999999999998 99999886543
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0026 Score=54.12 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=31.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-eCCchh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGT-EIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d~~~~r 99 (243)
++|++++|+|++ .||+.+++.+...|++|++. ++++.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~ 41 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKA 41 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence 468999999986 89999999999999998764 555544
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0026 Score=53.91 Aligned_cols=39 Identities=33% Similarity=0.396 Sum_probs=34.4
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.+++++|+|+ |.||+.+++.+...|++|+++++++.+.
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~ 43 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDA 43 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 46899999996 5999999999999999999999986643
|
|
| >PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0027 Score=59.83 Aligned_cols=69 Identities=26% Similarity=0.215 Sum_probs=50.4
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCH-HhhhcCCcEEEEccCCh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTR-EDVVSEAGLFVTTTENA 130 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~-~~~~~~aDvvi~a~G~~ 130 (243)
+.|+++.|+|.|..|+.+|..|+..|++|.++|..+.........|+..... .+.+.++|+||-..|-+
T Consensus 7 ~~~~~i~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~~~d~vv~sp~i~ 76 (460)
T PRK01390 7 FAGKTVAVFGLGGSGLATARALVAGGAEVIAWDDNPASRAKAAAAGITTADLRTADWSGFAALVLSPGVP 76 (460)
T ss_pred cCCCEEEEEeecHhHHHHHHHHHHCCCEEEEECCChhhHHHHHhcCccccCCChhHHcCCCEEEECCCCC
Confidence 5689999999999999999999999999999997654332223456543221 22346789998776543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 243 | ||||
| 3ond_A | 488 | Crystal Structure Of Lupinus Luteus S-Adenosyl-L-Ho | 4e-89 | ||
| 3h9u_A | 436 | S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypa | 1e-58 | ||
| 3dhy_A | 495 | Crystal Structures Of Mycobacterium Tuberculosis S- | 3e-58 | ||
| 3ce6_A | 494 | Crystal Structure Of Mycobacterium Tuberculosis S-A | 3e-58 | ||
| 1v8b_A | 479 | Crystal Structure Of A Hydrolase Length = 479 | 7e-58 | ||
| 3d64_A | 494 | Crystal Structure Of S-Adenosyl-L-Homocysteine Hydr | 1e-57 | ||
| 1li4_A | 432 | Human S-Adenosylhomocysteine Hydrolase Complexed Wi | 1e-56 | ||
| 3nj4_A | 435 | Fluoro-Neplanocin A In Human S-Adenosylhomocysteine | 1e-56 | ||
| 1b3r_A | 431 | Rat Liver S-Adenosylhomocystein Hydrolase Length = | 2e-56 | ||
| 1xwf_A | 431 | K185n Mutated S-adenosylhomocysteine Hydrolase Leng | 2e-56 | ||
| 1d4f_A | 431 | Crystal Structure Of Recombinant Rat-Liver D244e Mu | 6e-56 | ||
| 3g1u_A | 437 | Crystal Structure Of Leishmania Major S- Adenosylho | 9e-56 | ||
| 3n58_A | 464 | Crystal Structure Of S-Adenosyl-L-Homocysteine Hydr | 3e-55 | ||
| 1a7a_A | 432 | Structure Of Human Placental S-adenosylhomocysteine | 8e-55 | ||
| 3mtg_A | 444 | Crystal Structure Of Human S-Adenosyl Homocysteine | 6e-40 | ||
| 3gvp_A | 435 | Human Sahh-Like Domain Of Human Adenosylhomocystein | 3e-39 |
| >pdb|3OND|A Chain A, Crystal Structure Of Lupinus Luteus S-Adenosyl-L-Homocysteine Hydrolase In Complex With Adenosine Length = 488 | Back alignment and structure |
|
| >pdb|3H9U|A Chain A, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma Brucei Length = 436 | Back alignment and structure |
|
| >pdb|3DHY|A Chain A, Crystal Structures Of Mycobacterium Tuberculosis S-Adenosyl- Homocysteine Hydrolase In Ternary Complex With Substrate An Inhibitors Length = 495 | Back alignment and structure |
|
| >pdb|3CE6|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex With Nad And Adenosine Length = 494 | Back alignment and structure |
|
| >pdb|1V8B|A Chain A, Crystal Structure Of A Hydrolase Length = 479 | Back alignment and structure |
|
| >pdb|3D64|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase From Burkholderia Pseudomallei Length = 494 | Back alignment and structure |
|
| >pdb|1LI4|A Chain A, Human S-Adenosylhomocysteine Hydrolase Complexed With Neplanocin Length = 432 | Back alignment and structure |
|
| >pdb|3NJ4|A Chain A, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine Hydrolase Length = 435 | Back alignment and structure |
|
| >pdb|1B3R|A Chain A, Rat Liver S-Adenosylhomocystein Hydrolase Length = 431 | Back alignment and structure |
|
| >pdb|1XWF|A Chain A, K185n Mutated S-adenosylhomocysteine Hydrolase Length = 431 | Back alignment and structure |
|
| >pdb|1D4F|A Chain A, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S- Adenosylhomocysteine Hydrolase Length = 431 | Back alignment and structure |
|
| >pdb|3G1U|A Chain A, Crystal Structure Of Leishmania Major S- Adenosylhomocysteine Hydrolase Length = 437 | Back alignment and structure |
|
| >pdb|3N58|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase From Brucella Melitensis In Ternary Complex With Nad And Adenosine, Orthorhombic Form Length = 464 | Back alignment and structure |
|
| >pdb|1A7A|A Chain A, Structure Of Human Placental S-adenosylhomocysteine Hydrolase: Determination Of A 30 Selenium Atom Substructure From Data At A Single Wavelength Length = 432 | Back alignment and structure |
|
| >pdb|3MTG|A Chain A, Crystal Structure Of Human S-Adenosyl Homocysteine Hydrolase Protein Length = 444 | Back alignment and structure |
|
| >pdb|3GVP|A Chain A, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3 Length = 435 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 243 | |||
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 1e-114 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 1e-111 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 1e-110 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 1e-110 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 1e-110 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 1e-108 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 1e-106 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 7e-11 |
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} Length = 464 | Back alignment and structure |
|---|
Score = 333 bits (856), Expect = e-114
Identities = 125/272 (45%), Positives = 157/272 (57%), Gaps = 37/272 (13%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
+ + V+EETT GV RLYQ+Q G L F ++ T FDN YG + SL DG+ R
Sbjct: 180 QRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRR 239
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
TD+ +AGK+AV CG+GDVG+G A +L GARV TE+D ICALQA +G V+T +D
Sbjct: 240 GTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDA 299
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
S A + VTTT N D+I + HM++MK+ IV NIGHFDNEI + L K +KPQ
Sbjct: 300 ASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRNL---KWTNVKPQ 356
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219
D FP +R +I+L+E L+NLG TGHPSFVMS SFTNQ
Sbjct: 357 VDLIEFPDGKR-LILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTRTDAYKNEV 415
Query: 220 -----------AALHLGKPGDKFRKLTPEQAA 240
A LHL K G K L+ EQAA
Sbjct: 416 YVLPKHLDEKVARLHLDKLGAKLTVLSEEQAA 447
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* Length = 436 | Back alignment and structure |
|---|
Score = 324 bits (834), Expect = e-111
Identities = 136/278 (48%), Positives = 162/278 (58%), Gaps = 41/278 (14%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
+ + VSEETT GVK LY+ G L ++ T FDNLYG R SL DG+ R
Sbjct: 144 LDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR 203
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK A CG+GDVG+GCAAAL+ GARV+ TE+D I ALQA EG VL EDV
Sbjct: 204 ATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDV 263
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
V EA +FVTTT N DII H +M++ AIVCNIGHFD EI + L+A +R+ +KPQ
Sbjct: 264 VEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN-AKERVEVKPQ 322
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219
D + R II+LAE L+NLGC +GHPSFVMS SF NQ
Sbjct: 323 VDRYTMANGRH-IILLAEGRLVNLGCASGHPSFVMSNSFCNQVLAQIELWTNRDTGKYPR 381
Query: 220 -----------------AALHLGKPGDKFRKLTPEQAA 240
AALHLGK G K KLTP+QA
Sbjct: 382 GAKAQVYFLPKKLDEKVAALHLGKLGAKLTKLTPKQAE 419
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* Length = 488 | Back alignment and structure |
|---|
Score = 325 bits (836), Expect = e-110
Identities = 179/274 (65%), Positives = 197/274 (71%), Gaps = 35/274 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
MK+ +V VSEETT GVKRLYQMQANGTLLF ++ T FDNLYG RHSLPDGLMR
Sbjct: 198 MKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 257
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGK+AV G+GDVG+GCAAALK GARV+ TEID ICALQA EG+ VLT EDV
Sbjct: 258 ATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDV 317
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
VSEA +FVTTT N DIIM+ HMK+MKN AIVCNIGHFDNEIDML LE + G+KRITIKPQ
Sbjct: 318 VSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQ 377
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219
TD WVFP+T GIIILAE LMNLGC TGHPSFVMSCSFTNQ
Sbjct: 378 TDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEK 437
Query: 220 -------------AALHLGKPGDKFRKLTPEQAA 240
AALHL K G K KL+ +QA
Sbjct: 438 KVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQAD 471
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* Length = 494 | Back alignment and structure |
|---|
Score = 325 bits (836), Expect = e-110
Identities = 131/272 (48%), Positives = 158/272 (58%), Gaps = 34/272 (12%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
+ E + V+EETT GV RLYQ A G L F ++ T FDN YG RHSL DG+ R
Sbjct: 207 IAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFDNKYGTRHSLIDGINR 266
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
TD I GK + CG+GDVG+GCA A+K GARV TEID I ALQA+ EG V+T E+
Sbjct: 267 GTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEA 326
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
+ +A + VT T N DIIM+ H+K MK+ AI+ NIGHFDNEIDM LE G R+ +KPQ
Sbjct: 327 IGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERS-GATRVNVKPQ 385
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219
D W F T R II+L+E L+NLG TGHPSFVMS SF NQ
Sbjct: 386 VDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKNDEYDNEV 445
Query: 220 -----------AALHLGKPGDKFRKLTPEQAA 240
A +H+ G KLT EQA
Sbjct: 446 YRLPKHLDEKVARIHVEALGGHLTKLTKEQAE 477
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 Length = 479 | Back alignment and structure |
|---|
Score = 325 bits (835), Expect = e-110
Identities = 121/274 (44%), Positives = 160/274 (58%), Gaps = 36/274 (13%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
+ + ++ VSEETT GV RL +M LLF ++ T +DN+YG RHSLPDGLMR
Sbjct: 190 IAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSLPDGLMR 249
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD I+GKI V CG+GDVG+GCA+++K +GARV TEID ICA+QA+ EG V+T +++
Sbjct: 250 ATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEI 309
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
V + F+T T N D+I + H+ +MKN A+V NIGHFD+EI + +L Y+GI +KPQ
Sbjct: 310 VDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVKPQ 369
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219
D P + II+LA L+NLGC TGHP+FVMS SF NQ
Sbjct: 370 VDRITLPNGNK-IIVLARGRLLNLGCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKYEN 428
Query: 220 -------------AALHLGKPGDKFRKLTPEQAA 240
A HL K +L Q
Sbjct: 429 KVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQ 462
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* Length = 494 | Back alignment and structure |
|---|
Score = 319 bits (820), Expect = e-108
Identities = 130/272 (47%), Positives = 162/272 (59%), Gaps = 37/272 (13%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
+ V+EETT GV RLYQM+ +G L F ++ T FDNLYG R SL DG+ R
Sbjct: 210 RLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIKR 269
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
ATD+ IAGKIAV G+GDVG+GCA +L+ +GA V TEID ICALQA EG V+T E
Sbjct: 270 ATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYA 329
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
+A +FVT T N +I HMK M++ AIVCNIGHFD+EID+ Y + IKPQ
Sbjct: 330 ADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVASTRQY---QWENIKPQ 386
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219
D +FP +R +I+LAE L+NLGC TGHPSFVMS SFTNQ
Sbjct: 387 VDHIIFPDGKR-VILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTRGGEYANKV 445
Query: 220 -----------AALHLGKPGDKFRKLTPEQAA 240
A LHL + G + +L+ +QAA
Sbjct: 446 YVLPKHLDEKVARLHLARIGAQLSELSDDQAA 477
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* Length = 435 | Back alignment and structure |
|---|
Score = 312 bits (802), Expect = e-106
Identities = 100/273 (36%), Positives = 145/273 (53%), Gaps = 37/273 (13%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
M + + + EE+ GV RLYQ+ G L ++ T FDNLY R S+ DGL R
Sbjct: 153 MFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKR 212
Query: 57 ATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116
TD+ GK V CG+G+VG+GC AALKA+G+ V TEID ICALQA +G ++ +V
Sbjct: 213 TTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEV 272
Query: 117 VSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQ 176
+ + + +T T N +++ H+ +MKN+ IVCN+GH + EID+ L + ++ Q
Sbjct: 273 IRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTP-ELTWERVRSQ 331
Query: 177 TDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219
D ++P +R I++LAE L+NL C T P+FV+S + T QA
Sbjct: 332 VDHVIWPDGKR-IVLLAEGRLLNLSCST-VPTFVLSITATTQALALIELYNAPEGRYKQD 389
Query: 220 ------------AALHLGKPGDKFRKLTPEQAA 240
A+LHL +LT EQA
Sbjct: 390 VYLLPKKMDEYVASLHLPTFDAHLTELTDEQAK 422
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293 | Back alignment and structure |
|---|
Score = 60.0 bits (145), Expect = 7e-11
Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 2/100 (2%)
Query: 54 LMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTR 113
++ TD TI G G G VG A A+GA+V + + G+
Sbjct: 145 AIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHI 204
Query: 114 EDVVSEAGL--FVTTTENADIIMVRHMKQMKNAAIVCNIG 151
E T A ++ + +M + V ++
Sbjct: 205 SKAAQELRDVDVCINTIPALVVTANVLAEMPSHTFVIDLA 244
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 243 | |||
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 100.0 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 100.0 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 100.0 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 100.0 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 100.0 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 100.0 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 100.0 | |
| 3kb6_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 99.55 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 99.52 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 99.52 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 99.51 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 99.5 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 99.49 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 99.48 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 99.47 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 99.46 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 99.45 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 99.44 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 99.43 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 99.43 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 99.41 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 99.41 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 99.41 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 99.4 | |
| 1dxy_A | 333 | D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc | 99.4 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 99.39 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 99.38 | |
| 3oet_A | 381 | Erythronate-4-phosphate dehydrogenase; structural | 99.38 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 99.37 | |
| 3k5p_A | 416 | D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, | 99.37 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 99.37 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 99.36 | |
| 1sc6_A | 404 | PGDH, D-3-phosphoglycerate dehydrogenase; alloster | 99.35 | |
| 1xdw_A | 331 | NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas | 99.34 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 99.33 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 99.31 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 99.3 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 99.3 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 99.29 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 99.29 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 99.29 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 99.28 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 99.28 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 99.28 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 99.28 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 99.27 | |
| 1ygy_A | 529 | PGDH, D-3-phosphoglycerate dehydrogenase; oxidored | 99.27 | |
| 2o4c_A | 380 | Erythronate-4-phosphate dehydrogenase; erythronate | 99.27 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 99.27 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 99.26 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 99.26 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 99.26 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 99.26 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 99.25 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 99.25 | |
| 1qp8_A | 303 | Formate dehydrogenase; oxidoreductase; HET: NDP; 2 | 99.25 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 99.25 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 99.25 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 99.24 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 99.24 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 99.22 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 99.22 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 99.2 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 99.2 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 99.19 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 99.19 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 99.18 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 99.17 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 99.17 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 99.15 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 99.15 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 99.15 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 99.15 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 99.14 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 99.13 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 99.13 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 99.13 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 99.12 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 99.12 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 99.12 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 99.11 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 99.1 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 99.1 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 99.1 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 99.08 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 99.08 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 99.06 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 99.06 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 99.06 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 99.05 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 99.05 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 99.04 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 99.04 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 99.04 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.03 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 99.03 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 99.0 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 99.0 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 99.0 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.99 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.98 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 98.97 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 98.94 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.92 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 98.91 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.91 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 98.9 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 98.9 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.89 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.89 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.85 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 98.85 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.84 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 98.84 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 98.84 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 98.82 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.81 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.79 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 98.79 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 98.79 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 98.78 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 98.78 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 98.78 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 98.77 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.77 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 98.76 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 98.75 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 98.73 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 98.73 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 98.72 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.71 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 98.71 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 98.7 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.7 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.7 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.68 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 98.68 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 98.68 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 98.68 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 98.67 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 98.66 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 98.66 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 98.65 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 98.62 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 98.62 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 98.62 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 98.59 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 98.59 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 98.59 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 98.58 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 98.57 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 98.57 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 98.56 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.55 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 98.55 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 98.54 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.52 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 98.52 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 98.51 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 98.51 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.51 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.51 | |
| 1zej_A | 293 | HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural | 98.5 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.5 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.49 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 98.48 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 98.48 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 98.48 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.47 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 98.46 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 98.46 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 98.45 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.44 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.44 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 98.44 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 98.44 | |
| 4b4u_A | 303 | Bifunctional protein fold; oxidoreductase; HET: NA | 98.43 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 98.42 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.42 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.42 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.41 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 98.41 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.41 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.41 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.41 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 98.4 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 98.4 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.4 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 98.4 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.39 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 98.39 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 98.39 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.39 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.38 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.38 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.38 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.37 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.37 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.37 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.36 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.36 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.36 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.36 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 98.36 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 98.35 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 98.35 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.35 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 98.34 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.34 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 98.34 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.34 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 98.34 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 98.34 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.34 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.33 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 98.33 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.33 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 98.33 | |
| 2a9f_A | 398 | Putative malic enzyme ((S)-malate:NAD+ oxidoreduct | 98.33 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.32 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.32 | |
| 3fr7_A | 525 | Putative ketol-acid reductoisomerase (OS05G057370 | 98.32 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.32 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 98.32 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.32 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.32 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.32 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.31 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.31 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.31 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.3 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.3 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.29 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.29 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 98.29 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 98.29 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.29 | |
| 2i99_A | 312 | MU-crystallin homolog; thyroid hormine binding pro | 98.28 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.28 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.28 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.28 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 98.27 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.27 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.27 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.27 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 98.26 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.26 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 98.26 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 98.25 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.25 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.25 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.25 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.25 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 98.24 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 98.24 | |
| 3ulk_A | 491 | Ketol-acid reductoisomerase; branched-chain amino | 98.24 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.24 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.23 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.23 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.23 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.23 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.22 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.22 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.22 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.22 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.21 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 98.21 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.21 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.21 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.21 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 98.2 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.2 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.2 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.19 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.19 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 98.19 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.19 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.19 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.19 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.19 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.18 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.18 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 98.18 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.18 | |
| 2yjz_A | 201 | Metalloreductase steap4; oxidoreductase, metabolic | 97.48 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.17 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.17 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.17 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.17 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.17 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.17 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.17 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 98.17 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.17 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.16 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 98.16 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.15 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 98.15 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 98.15 | |
| 3hdj_A | 313 | Probable ornithine cyclodeaminase; APC62486, borde | 98.15 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.15 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.14 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.14 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.14 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.14 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.14 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 98.13 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.12 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 98.12 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.11 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.11 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.11 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 98.11 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.11 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 98.11 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.11 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 98.1 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 98.1 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.1 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.1 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 98.1 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.09 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.09 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.09 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.09 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.09 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.09 | |
| 2p4q_A | 497 | 6-phosphogluconate dehydrogenase, decarboxylating; | 98.08 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.08 | |
| 1omo_A | 322 | Alanine dehydrogenase; two-domain, beta-sandwich-d | 98.07 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.07 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.07 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 98.06 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 98.05 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 98.05 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 98.05 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.05 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 98.05 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.05 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.05 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 98.04 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.04 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.03 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.03 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.03 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 98.03 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 98.03 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 98.03 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 98.03 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.02 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 98.02 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.02 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 98.01 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.01 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.01 | |
| 1x7d_A | 350 | Ornithine cyclodeaminase; binds NAD+, binds L-orni | 98.01 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.01 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 98.0 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.0 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 97.99 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 97.99 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.99 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 97.99 | |
| 3k6j_A | 460 | Protein F01G10.3, confirmed by transcript evidenc; | 97.98 | |
| 3mog_A | 483 | Probable 3-hydroxybutyryl-COA dehydrogenase; struc | 97.98 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.98 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 97.98 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 97.98 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.97 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 97.97 | |
| 2qrj_A | 394 | Saccharopine dehydrogenase, NAD+, L-lysine- formin | 97.97 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 97.97 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 97.96 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 97.96 | |
| 1gtm_A | 419 | Glutamate dehydrogenase; oxidoreductase, NAD, NADP | 97.96 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 97.95 | |
| 3ado_A | 319 | Lambda-crystallin; L-gulonate 3-dehydrogenase, str | 97.95 | |
| 2pgd_A | 482 | 6-phosphogluconate dehydrogenase; oxidoreductase ( | 97.95 | |
| 2dvm_A | 439 | Malic enzyme, 439AA long hypothetical malate oxido | 97.95 | |
| 1zcj_A | 463 | Peroxisomal bifunctional enzyme; peroxisomal multi | 97.95 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 97.94 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 97.94 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 97.94 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 97.93 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 97.93 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 97.93 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 97.93 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.92 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 97.92 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 97.92 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.92 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 97.91 | |
| 1z82_A | 335 | Glycerol-3-phosphate dehydrogenase; TM0378, struct | 97.91 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.91 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 97.9 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 97.89 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.89 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 97.88 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.88 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 97.88 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 97.87 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 97.87 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.87 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 97.86 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 97.86 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 97.86 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 97.85 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.84 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 97.84 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.84 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 97.83 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.82 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 97.82 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 97.82 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 97.82 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 97.82 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 97.81 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 97.81 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 97.81 | |
| 1pgj_A | 478 | 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o | 97.81 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 97.8 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 97.8 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 97.8 | |
| 1dlj_A | 402 | UDP-glucose dehydrogenase; rossmann fold, ternary | 97.79 | |
| 3ojo_A | 431 | CAP5O; rossmann fold, complex with cofactor NAD an | 97.79 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 97.79 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 97.77 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 97.76 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 97.75 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 97.75 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 97.74 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 97.72 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.71 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 97.71 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.71 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 97.69 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 97.68 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 97.67 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 97.67 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 97.65 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 97.65 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 97.65 | |
| 3hwr_A | 318 | 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A | 97.65 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 97.65 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.64 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.64 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 97.62 | |
| 1pjq_A | 457 | CYSG, siroheme synthase; rossman fold, nucleotide | 97.62 | |
| 1wdk_A | 715 | Fatty oxidation complex alpha subunit; alpha2BETA2 | 97.62 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.62 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 97.61 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 97.6 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 97.6 | |
| 2rcy_A | 262 | Pyrroline carboxylate reductase; malaria, structur | 97.59 | |
| 3nv9_A | 487 | Malic enzyme; rossmann fold, oxidoreductase; 2.25A | 97.59 | |
| 1x0v_A | 354 | GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase | 97.57 | |
| 1yj8_A | 375 | Glycerol-3-phosphate dehydrogenase; SGPP, structur | 97.57 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 97.56 | |
| 2wtb_A | 725 | MFP2, fatty acid multifunctional protein (ATMFP2); | 97.55 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 97.54 | |
| 2qyt_A | 317 | 2-dehydropantoate 2-reductase; APC81190, porphyrom | 97.54 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.54 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 97.53 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 97.53 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 97.52 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.52 | |
| 3aog_A | 440 | Glutamate dehydrogenase; NAD(H), oxidoreducta; HET | 97.51 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 97.51 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.48 | |
| 3k92_A | 424 | NAD-GDH, NAD-specific glutamate dehydrogenase; ROC | 97.48 | |
| 3ghy_A | 335 | Ketopantoate reductase protein; oxidoreductase, NA | 97.48 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.47 | |
| 3e18_A | 359 | Oxidoreductase; dehydrogenase, NAD-binding, struct | 97.44 | |
| 3aoe_E | 419 | Glutamate dehydrogenase; rossmann fold, NADH, oxid | 97.42 | |
| 2tmg_A | 415 | Protein (glutamate dehydrogenase); metabolic role, | 97.41 | |
| 1kyq_A | 274 | Met8P, siroheme biosynthesis protein Met8; homodim | 97.41 | |
| 2dc1_A | 236 | L-aspartate dehydrogenase; NAD, oxidoreductase; HE | 97.41 | |
| 2i76_A | 276 | Hypothetical protein; NADP, dehydrogenase, TM1727, | 97.4 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 97.39 | |
| 3c7a_A | 404 | Octopine dehydrogenase; L) stereospecific opine de | 97.38 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 97.38 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.38 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 97.36 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 97.36 | |
| 3zwc_A | 742 | Peroxisomal bifunctional enzyme; beta oxidation pa | 97.35 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 97.34 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 97.3 | |
| 4hkt_A | 331 | Inositol 2-dehydrogenase; structural genomics, nys | 97.28 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 97.27 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.27 | |
| 3i83_A | 320 | 2-dehydropantoate 2-reductase; structural genomics | 97.27 | |
| 3ego_A | 307 | Probable 2-dehydropantoate 2-reductase; structural | 97.27 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.25 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 97.25 | |
| 2yfq_A | 421 | Padgh, NAD-GDH, NAD-specific glutamate dehydrogena | 97.25 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 97.24 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.23 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 97.23 |
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-57 Score=417.11 Aligned_cols=238 Identities=53% Similarity=0.796 Sum_probs=225.3
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
+++.++|++|+|+||++||++|.++|.|.|| ||.+|+.|||.|+|+++++++++|+.+..+.||+|+|+|+|+||
T Consensus 180 ~~~~i~G~~EeTtTGv~rL~~m~~~g~L~~PvinVnds~tK~~fDn~yG~~eslvdgI~Ratg~~L~GKTVgVIG~G~IG 259 (464)
T 3n58_A 180 QRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVG 259 (464)
T ss_dssp HHHHCCEEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHH
T ss_pred HHhhccceeeccccchHHHHHHHHcCCCCCCEEeeccHhhhhhhhhhhcchHHHHHHHHHhcCCcccCCEEEEECcCHHH
Confidence 4577999999999999999999999999999 99999999999999999999999988888999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|+.++++|++|+++|++|.+..++...|+++.+++++++.+|+|+.++|++++++.+.|+.||++++++|+|+++.+
T Consensus 260 r~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdvE 339 (464)
T 3n58_A 260 KGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNE 339 (464)
T ss_dssp HHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTTT
T ss_pred HHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCcc
Confidence 99999999999999999999988777778899888899999999999999999999999999999999999999999988
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
+|.+++.. .++.+++++++.|.+++++ .|.+|++||+||++|+.|||+||||+||++|+
T Consensus 340 ID~~aL~~---~~~~~ik~~v~~~~~~~g~-~i~lLaeGrlvNL~~a~GhP~~vm~~sf~~Q~la~~~l~~~~~~~~~~v 415 (464)
T 3n58_A 340 IQVAALRN---LKWTNVKPQVDLIEFPDGK-RLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTRTDAYKNEV 415 (464)
T ss_dssp BTCGGGTT---SEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHSGGGCCSSE
T ss_pred cCHHHHHh---CccccccCCeeEEEeCCCC-EEEEEeCCceecccCCCCChHHHHhHHHHHHHHHHHHHHhCccccCCCe
Confidence 99998865 3567788999999999988 79999999999999999999999999999999
Q ss_pred -----------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||+++|++|++||+||++||.
T Consensus 416 ~~lP~~lDe~VA~l~L~~~g~~l~~lt~~Q~~yl~ 450 (464)
T 3n58_A 416 YVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIG 450 (464)
T ss_dssp ECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHT
T ss_pred eECCHHHHHHHHHHHHHHcCCEeccCCHHHHHHcC
Confidence 999999999999999999999984
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-55 Score=400.53 Aligned_cols=239 Identities=41% Similarity=0.681 Sum_probs=220.8
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
++++++|++|+|+||++||++|.++|.|.+| ||.+|+.|||.|+|+++++++++++.+..+.|++|+|+|+|+||
T Consensus 153 ~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi~rat~~~L~GktV~ViG~G~IG 232 (435)
T 3gvp_A 153 MFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKRTTDMMFGGKQVVVCGYGEVG 232 (435)
T ss_dssp HHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHH
T ss_pred HHhhcceeEeccchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhhhhhhHHHHHHHHHHhhCceecCCEEEEEeeCHHH
Confidence 4678999999999999999999999999999 99999999999999999999999988778999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|+.|+++|++|+++|+++.+..++...|+++.++++++.++|+|+.|+|++++++.+.|+.||++++++|+|+++.+
T Consensus 233 k~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~E 312 (435)
T 3gvp_A 233 KGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTE 312 (435)
T ss_dssp HHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTTT
T ss_pred HHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCcc
Confidence 99999999999999999999988777888898888899999999999999999999998899999999999999999988
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
+|.+.+.. ...++.+++++++.|.+++++ .|.+|++|++|||+|. +||+||||+||++|+
T Consensus 313 Id~~~L~~-~~~~~~~ir~~v~~y~~~dg~-~I~LLAeGrLvNl~~~-~hp~~vm~~sf~~q~la~~~l~~~~~~~~~~~ 389 (435)
T 3gvp_A 313 IDVASLRT-PELTWERVRSQVDHVIWPDGK-RIVLLAEGRLLNLSCS-TVPTFVLSITATTQALALIELYNAPEGRYKQD 389 (435)
T ss_dssp BTGGGGCS-TTCEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHCCTTTSCSS
T ss_pred CCHHHHHh-hcceeEEEEcCeeeEEcCCCc-EEEEecCCCEeeecCC-CCcHHHHhHHHHHHHHHHHHHHhCcccccCCC
Confidence 99988853 134567788888889999877 8999999999999998 599999999999999
Q ss_pred ------------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 ------------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 ------------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||+++|++|++||+||++||.
T Consensus 390 v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~ 425 (435)
T 3gvp_A 390 VYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLG 425 (435)
T ss_dssp EEECCHHHHHHHHHHHGGGGTCCCCCCCHHHHHHHT
T ss_pred eeeCCHHHHHHHHHHHHHhcCCEeccCCHHHHHHcC
Confidence 999999999999999999999984
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-52 Score=384.00 Aligned_cols=240 Identities=57% Similarity=0.846 Sum_probs=225.0
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
++++++|++|+|+||++||++|.+.|.+.+| ||.+|+.+|+.|+|+++++++++++.+..+.|++|+|+|+|.||
T Consensus 144 ~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~ratg~~L~GktVgIiG~G~IG 223 (436)
T 3h9u_A 144 LDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKTACVCGYGDVG 223 (436)
T ss_dssp CTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHH
T ss_pred HHhhccceeeccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHHHHhcCCcccCCEEEEEeeCHHH
Confidence 6788999999999999999999999999999 99999999999999999999999888778899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|+.|+++|++|+++|+++.+...+...|+++.+++++++++|+|+.+++++++++.+.|+.||++++|+|+|+++.+
T Consensus 224 ~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg~vE 303 (436)
T 3h9u_A 224 KGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDTE 303 (436)
T ss_dssp HHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSSGGG
T ss_pred HHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCCCCc
Confidence 99999999999999999999988777888898888999999999999999999999998899999999999999999888
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
||.+++... +++..+++.++..|.+++++ .+.+|++|++||++|+.|||+||||+||++|+
T Consensus 304 ID~~~L~~~-~~~~~~ir~~vd~y~~~dg~-~I~LLaeGrLvNl~~~~Ghp~~vm~~sf~~q~la~~~l~~~~~~~~~~~ 381 (436)
T 3h9u_A 304 IQVAWLKAN-AKERVEVKPQVDRYTMANGR-HIILLAEGRLVNLGCASGHPSFVMSNSFCNQVLAQIELWTNRDTGKYPR 381 (436)
T ss_dssp BCHHHHHHH-CSEEEEEETTEEEEECTTSC-EEEEEGGGSCHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHTTTTTSSCC
T ss_pred cCHHHHHhh-cCceEeecCCceEEEcCCCC-EEEEecCCCeecccCCCCChHHHhhHHHHHHHHHHHHHHhCCCcccCCC
Confidence 999999873 55667788888889999878 89999999999999999999999999999998
Q ss_pred -----------------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||+++|++|++||+||++||.
T Consensus 382 ~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~ 422 (436)
T 3h9u_A 382 GAKAQVYFLPKKLDEKVAALHLGKLGAKLTKLTPKQAEYIN 422 (436)
T ss_dssp ---CCEEECCHHHHHHHHHHHHHHHTCCCCCCCHHHHHHTT
T ss_pred CCCceeeeCCHHHHHHHHHHHHHHcCCccccCCHHHHHhcC
Confidence 789999999999999999999985
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=365.12 Aligned_cols=241 Identities=74% Similarity=1.094 Sum_probs=219.6
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
++++++|++|+|+||++||++|.+.|.|.+| ||.+|+.|||.|+|++++++++++..+..+.||+|+|+|+|+||
T Consensus 198 ~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~r~tg~~L~GKtVvVtGaGgIG 277 (488)
T 3ond_A 198 MKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVG 277 (488)
T ss_dssp HHHHCCEEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHH
T ss_pred HHhhcceeEecccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccHHHHHHHHHHcCCcccCCEEEEECCCHHH
Confidence 4567999999999999999999999999999 99999999999999999999999887777899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|+.|+++|++|+++|+++.+..++...|+++.+.++....+|++++++|+.++++.+.++.|+++++|+|+|++..+
T Consensus 278 ~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~~~E 357 (488)
T 3ond_A 278 KGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNE 357 (488)
T ss_dssp HHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSSTTTT
T ss_pred HHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCCCcc
Confidence 99999999999999999999998878888888887888888899999999999999988899999999999999998777
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccC-chhhHHhhhcCCeecccCCCCCccccccchHHHHH----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQ-TRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA---------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~-~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~---------------- 219 (243)
++...+..+.......+..++..+.+++ ++ ++.++++|+|||++|..|||+++||+||++|+
T Consensus 358 i~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~-aI~lLaeGRIVNlsS~~G~p~~vm~~sfa~Q~la~~~l~~~~~~~~~~ 436 (488)
T 3ond_A 358 IDMLGLETHPGVKRITIKPQTDRWVFPETNT-GIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYE 436 (488)
T ss_dssp BTHHHHHTSTTCEEEEEETTEEEEECTTTCC-EEEEEGGGSCHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCC
T ss_pred cchHHHHHhhhhheEEeeeeEEEEEecchHH-HHHHHcCCcEEEEecCcccCcccccccHHHHHHHHHHHHhCCCccccC
Confidence 8888776532223455667777888887 66 79999999999999999999999999999999
Q ss_pred --------------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 --------------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 --------------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||+++|++|++||+||++||.
T Consensus 437 ~gv~~lp~~ld~~vA~l~l~~~g~~l~~lt~~q~~y~~ 474 (488)
T 3ond_A 437 KKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYIS 474 (488)
T ss_dssp SSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHTT
T ss_pred CCceeCCHHHHHHHHHHhchhcCCchhhcCHHHHHHcC
Confidence 999999999999999999999985
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-36 Score=280.34 Aligned_cols=239 Identities=54% Similarity=0.818 Sum_probs=210.7
Q ss_pred ccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHHH
Q 037949 3 KEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGR 77 (243)
Q Consensus 3 ~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~ 77 (243)
++.+.|++|+|++|+.++++|.++|.+.+| ++..+..+++.++++.+.|+++++..+..++|++|+|+|+|+||+
T Consensus 208 ~~~i~GvveetgtGVd~l~a~~~~Gilv~~~~~vn~sVae~~~r~l~~~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~ 287 (494)
T 3ce6_A 208 AESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFDNKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGK 287 (494)
T ss_dssp HHHCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHH
T ss_pred hcCeEEEEEEeCCChhHHHHHHHcCCEEEecCCccHHHHHHHHhhhhhhhhhhhHHHHhccCCCCCcCEEEEEccCHHHH
Confidence 467999999999999999999999998776 888888889999999999999987665568999999999999999
Q ss_pred HHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCC
Q 037949 78 GCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEI 157 (243)
Q Consensus 78 ~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~i 157 (243)
.+|+.++++|++|+++|+++.++..+...|+++.++++.+.++|+|++|+|++++++.+.++.||++++++|+|+++.++
T Consensus 288 ~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~eI 367 (494)
T 3ce6_A 288 GCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEI 367 (494)
T ss_dssp HHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGGGB
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCCcc
Confidence 99999999999999999999988788888988778888888999999999999999867899999999999999997668
Q ss_pred ChhHHHHhhcCeEEEeecCeeeeEccC-chhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 158 DMLDLEAYRGIKRITIKPQTDPWVFPQ-TRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 158 d~~~l~~~~~~~~~~i~~~~~~~~~~~-~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
|...+.. +++++..+....+.+.+++ .+ .+.++++|+++|+.+.++||.++++.+|+.|+
T Consensus 368 d~~aL~~-~aL~~~~I~~~ldv~~~~~~~~-~l~LL~~grlvnL~~~TPH~a~~~~~s~~~qa~~ai~~~~~g~~~~~~V 445 (494)
T 3ce6_A 368 DMAGLER-SGATRVNVKPQVDLWTFGDTGR-SIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKNDEYDNEV 445 (494)
T ss_dssp CHHHHHH-TTCEEEEEETTEEEEECTTTCC-EEEEEGGGSCHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHTGGGCCSSE
T ss_pred CHHHHHH-hhhccceEEEEEEEeecCCcch-HHHHHhCCCEEeccCCCCCccccchHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 8888865 2454455665556666665 45 78899999999999999999999999998776
Q ss_pred -----------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|.+||+++|.+|++||++|++||.
T Consensus 446 ~~~P~~~De~vA~lhL~~lg~~l~~lt~~q~~y~~ 480 (494)
T 3ce6_A 446 YRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLG 480 (494)
T ss_dssp ECCCHHHHHHHHHHHHHHHTCCCCCCCHHHHHHHT
T ss_pred EECHHHHHHHHHHhhHHHHHHHHHHhChhHHHHcc
Confidence 889999999999999999999984
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=270.12 Aligned_cols=238 Identities=54% Similarity=0.816 Sum_probs=209.9
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
|+++++|++|+|++|+.++++|.++|++-+| +++.+..+++.++++++.++++.+..+..+.|++|+|+|+|.||
T Consensus 210 l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~n~~~vn~sVae~l~r~~~~~~~~l~~gw~~~~g~~L~GktVgIIG~G~IG 289 (494)
T 3d64_A 210 RLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVG 289 (494)
T ss_dssp HHTTCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHHHHHHHHHHTTHHHHHHHHHCCCCTTCEEEEECCSHHH
T ss_pred HhhCcEEEEEEcccCHhhHHHHHHCCCEEEECCCccHHHHHHHHhhhHhhhhhhhhhhhhccccccCCCEEEEEccCHHH
Confidence 4588999999999999999999999997776 88888888999999999988877666667899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|+.++++|++|+++|+++.+...+...|+.+.++++.++.+|+|+.+++++++++.+.|+.||++++++|+|+++.+
T Consensus 290 ~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg~ve 369 (494)
T 3d64_A 290 KGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSE 369 (494)
T ss_dssp HHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSSSCS
T ss_pred HHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECCCcccccCHHHHhhCCCCcEEEEcCCCcch
Confidence 99999999999999999999987556666788877899999999999999999999998899999999999999999866
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
||.+++ . .++...+...++.|.+++.+ .+..+++++++|+.+++|||.++|+.+|+.|+
T Consensus 370 ID~~aL-~--AL~~g~I~~~~Dv~plp~~~-pL~~l~~~nvv~tH~atg~~~~~~~~~~a~~~~~ni~~~~~g~~~~n~V 445 (494)
T 3d64_A 370 IDVAST-R--QYQWENIKPQVDHIIFPDGK-RVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTRGGEYANKV 445 (494)
T ss_dssp BCCGGG-T--TSEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHGGGSCSSE
T ss_pred hchHHH-H--hhhcCccceeEEEEECCCCC-chhhcCCCCEEEEeCcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCce
Confidence 799888 4 25556666667777777656 67788889999997777999999999999888
Q ss_pred -----------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|.+||+++|+++++||++|.+||.
T Consensus 446 ~~lp~~~d~~va~l~L~~~g~~~~~l~~~q~~y~~ 480 (494)
T 3d64_A 446 YVLPKHLDEKVARLHLARIGAQLSELSDDQAAYIG 480 (494)
T ss_dssp EECCHHHHHHHHHHHHTTTTCCCCCCCHHHHHHHT
T ss_pred eeCChhHHHHHHHHHHHHcCChHHhhChhhHHhEe
Confidence 899999999999999999999984
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=267.21 Aligned_cols=241 Identities=50% Similarity=0.824 Sum_probs=210.5
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
|+++++|++|+|++|+.++.+|.++|++-+| ++..+..+++.+++.++.++++++..+..+.|++|+|+|+|.||
T Consensus 190 l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~p~~~vn~sVae~l~r~~~~~~~~l~~gw~r~~~~~l~GktVgIIG~G~IG 269 (479)
T 1v8b_A 190 IAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSLPDGLMRATDFLISGKIVVICGYGDVG 269 (479)
T ss_dssp HHTTCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTSEEEEECCSHHH
T ss_pred HhcCeEEEEEeeCccHhHHHHHHHcCCEEeccCCccHHHHHHHHhchHhHHHHHhhhhhhccccccCCCEEEEEeeCHHH
Confidence 4578999999999999999999999998777 77777777888888888888876655657899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|+.++++|++|+++|+++.+...+...|+.+.++++.++.+|+|+.|++++++++.+.|+.||+|++++|+|+++.+
T Consensus 270 ~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg~~E 349 (479)
T 1v8b_A 270 KGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDE 349 (479)
T ss_dssp HHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTTS
T ss_pred HHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCCCcc
Confidence 99999999999999999999987656777788877899999999999999999999998899999999999999999877
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
+|.+++..++.++...+...++.|.+++.+ .+..+++++++|+.+.+|||.++|+.+|+.|+
T Consensus 350 Id~~aL~~~~AL~~g~I~a~lDv~plp~~~-~l~~l~~~nvv~tH~atghp~e~~~~s~a~~~~~ni~~~~~g~~~~l~n 428 (479)
T 1v8b_A 350 IQVNELFNYKGIHIENVKPQVDRITLPNGN-KIIVLARGRLLNLGCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKYEN 428 (479)
T ss_dssp BCHHHHHTSTTCEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHTTTSSSCCS
T ss_pred ccchhhhccccceeeeEeeeEEEEECCCCC-eeeEecCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHcCCCCcCCc
Confidence 999998762235555666667777777666 68888889999998777999999999998665
Q ss_pred -------------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -------------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -------------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|.+||+++|.++++||++|.+|+.
T Consensus 429 ~V~~lp~~~de~va~l~L~~lG~~l~~lt~~q~~yi~ 465 (479)
T 1v8b_A 429 KVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLG 465 (479)
T ss_dssp SEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHT
T ss_pred ceEeCChhhHHHHHHHHHHHcCChHhhcChhhhhhEe
Confidence 789999999999999999999984
|
| >3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.2e-14 Score=126.79 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=87.8
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEcc----CChhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTT----ENADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~----G~~~~i~~ 135 (243)
..+.|++++|+|+|.||+.+|++++++|++|+++|+.+.. .....+....++++.++.+|+|+.++ .+.++++.
T Consensus 137 ~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~--~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~ 214 (334)
T 3kb6_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRE--DLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINE 214 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred ceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccch--hhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCH
Confidence 3578999999999999999999999999999999987543 33445666678999999999999875 46789999
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|+.||+++++||+||++ -+|.++|..
T Consensus 215 ~~l~~mk~~a~lIN~aRG~-iVde~aL~~ 242 (334)
T 3kb6_A 215 ERISLMKDGVYLINTARGK-VVDTDALYR 242 (334)
T ss_dssp HHHHHSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred HHHhhcCCCeEEEecCccc-cccHHHHHH
Confidence 9999999999999999997 488888865
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=6.7e-14 Score=125.29 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=88.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+|+.++++|++|+++|+++.....+...|+...++++.++.+|+|+.|+. +.++++.+
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 221 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAE 221 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHH
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHH
Confidence 57899999999999999999999999999999999875444555667766688899999999999864 46788888
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|..||++++++|+|+++ .+|.+++..
T Consensus 222 ~l~~mk~gailIN~arg~-~vd~~aL~~ 248 (330)
T 4e5n_A 222 LLALVRPGALLVNPCRGS-VVDEAAVLA 248 (330)
T ss_dssp HHTTSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred HHhhCCCCcEEEECCCCc-hhCHHHHHH
Confidence 899999999999999986 478877754
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.1e-13 Score=124.52 Aligned_cols=102 Identities=17% Similarity=0.212 Sum_probs=86.1
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-CHHhhhcCCcEEEEccC----Chhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-TREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+++.....+. |+... ++++.++++|+|+.++. +.++++
T Consensus 169 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~ 246 (345)
T 4g2n_A 169 MGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLD 246 (345)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBC
T ss_pred cccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhC
Confidence 358899999999999999999999999999999999875433322 66544 78899999999999875 457788
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.|..||+++++||+|+++ .+|.+++..
T Consensus 247 ~~~l~~mk~gailIN~aRG~-~vde~aL~~ 275 (345)
T 4g2n_A 247 HDRIAKIPEGAVVINISRGD-LINDDALIE 275 (345)
T ss_dssp HHHHHHSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCc-hhCHHHHHH
Confidence 88899999999999999996 478887754
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.1e-14 Score=127.08 Aligned_cols=103 Identities=21% Similarity=0.231 Sum_probs=86.7
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+++.. ..+...|+...++++.+..+|+|+.|+. +.++++.
T Consensus 172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~ 250 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGA 250 (365)
T ss_dssp CCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCH
T ss_pred cccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCH
Confidence 3578999999999999999999999999999999998643 3455678776788999999999998853 4678888
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|+.||+++++||+|+++ .+|.+++..
T Consensus 251 ~~l~~mk~gailIN~aRG~-~vde~aL~~ 278 (365)
T 4hy3_A 251 EAFSSMRRGAAFILLSRAD-VVDFDALMA 278 (365)
T ss_dssp HHHHTSCTTCEEEECSCGG-GSCHHHHHH
T ss_pred HHHhcCCCCcEEEECcCCc-hhCHHHHHH
Confidence 8999999999999999996 488888765
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-13 Score=122.91 Aligned_cols=104 Identities=12% Similarity=0.191 Sum_probs=89.1
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-CHHhhhcCCcEEEEccC----Chhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-TREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+++.....+...|+... ++++.++.+|+|+.|+. +.++++
T Consensus 160 ~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~ 239 (351)
T 3jtm_A 160 YDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFN 239 (351)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBS
T ss_pred ccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhc
Confidence 3589999999999999999999999999999999998755555666677644 78999999999999864 456888
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.|..||+++++||+|+++ .+|.+++..
T Consensus 240 ~~~l~~mk~gailIN~aRG~-~vde~aL~~ 268 (351)
T 3jtm_A 240 KELIGKLKKGVLIVNNARGA-IMERQAVVD 268 (351)
T ss_dssp HHHHHHSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred HHHHhcCCCCCEEEECcCch-hhCHHHHHH
Confidence 88999999999999999986 478887755
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.2e-13 Score=118.83 Aligned_cols=103 Identities=18% Similarity=0.220 Sum_probs=87.3
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
..+.|++++|+|+|.||..+|+.++++|++|+++|+++.+. .+...|++..++++.++++|+|+.|+. +.++++.
T Consensus 161 ~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~ 239 (335)
T 2g76_A 161 TELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLND 239 (335)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCH
T ss_pred cCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCH
Confidence 35899999999999999999999999999999999987653 455677766678888999999999864 4567877
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.||++++++|+|+++ .+|..++..
T Consensus 240 ~~l~~mk~gailIN~arg~-vvd~~aL~~ 267 (335)
T 2g76_A 240 NTFAQCKKGVRVVNCARGG-IVDEGALLR 267 (335)
T ss_dssp HHHTTSCTTEEEEECSCTT-SBCHHHHHH
T ss_pred HHHhhCCCCcEEEECCCcc-ccCHHHHHH
Confidence 7899999999999999986 478776654
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.47 E-value=4.5e-13 Score=118.77 Aligned_cols=103 Identities=20% Similarity=0.183 Sum_probs=87.6
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+++.+ ..+...|++..++++.++++|+|+.|+. +.++++.
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~ 216 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINE 216 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCH
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCH
Confidence 3589999999999999999999999999999999998876 3556678766678888889999999865 4567877
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.||++++++|+|+++ .+|..++..
T Consensus 217 ~~l~~mk~ga~lin~arg~-~vd~~aL~~ 244 (307)
T 1wwk_A 217 ERLKLMKKTAILINTSRGP-VVDTNALVK 244 (307)
T ss_dssp HHHHHSCTTCEEEECSCGG-GBCHHHHHH
T ss_pred HHHhcCCCCeEEEECCCCc-ccCHHHHHH
Confidence 7899999999999999975 477776654
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.46 E-value=5.8e-13 Score=118.34 Aligned_cols=103 Identities=19% Similarity=0.253 Sum_probs=87.4
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
..+.|++++|+|+|.||..+|+.++++|++|+++|+++.+. .+...|+...++++.++.+|+|+.|+. +.++++.
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~ 216 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDY 216 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCH
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCH
Confidence 35899999999999999999999999999999999988764 455677765678888889999999975 4567877
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.||++++++|+|+++ .+|..++..
T Consensus 217 ~~l~~mk~ga~lIn~arg~-~vd~~aL~~ 244 (313)
T 2ekl_A 217 PQFELMKDNVIIVNTSRAV-AVNGKALLD 244 (313)
T ss_dssp HHHHHSCTTEEEEESSCGG-GBCHHHHHH
T ss_pred HHHhcCCCCCEEEECCCCc-ccCHHHHHH
Confidence 7899999999999999975 477776654
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-12 Score=114.34 Aligned_cols=99 Identities=17% Similarity=0.224 Sum_probs=83.2
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc---CHHhhhcCCcEEEEccCChhcccHH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL---TREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~---~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
..+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.+...+...|++.. ++++.+.++|+|+.|++. ++++.+
T Consensus 151 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~~i~~~ 229 (293)
T 3d4o_A 151 FTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-LVVTAN 229 (293)
T ss_dssp SCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-CCBCHH
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-HHhCHH
Confidence 3579999999999999999999999999999999999877655556676542 466778899999999865 667777
Q ss_pred HHccCCCCeEEEEecCCCCCCCh
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDM 159 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~ 159 (243)
.++.|+++++++|+++++..++.
T Consensus 230 ~l~~mk~~~~lin~ar~~~~~~~ 252 (293)
T 3d4o_A 230 VLAEMPSHTFVIDLASKPGGTDF 252 (293)
T ss_dssp HHHHSCTTCEEEECSSTTCSBCH
T ss_pred HHHhcCCCCEEEEecCCCCCCCH
Confidence 89999999999999997655665
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.3e-12 Score=113.46 Aligned_cols=143 Identities=14% Similarity=0.096 Sum_probs=101.0
Q ss_pred chhCHHH-HHHHHHcCC--CCCc--hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCC
Q 037949 13 TTMGVKR-LYQMQANGT--LLFS--EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVG 87 (243)
Q Consensus 13 T~tG~~~-~~~~~~~~~--l~~p--~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~G 87 (243)
+...... ++.+.++|. .++| ++.. ..+.....++.|..........+.|++++|+|+|.||+.+++.++.+|
T Consensus 104 ~g~~~~d~~~~~~~~gi~v~~~~~~~~v~---~~r~~~~~~g~~~~~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G 180 (300)
T 2rir_A 104 SGISNAYLENIAAQAKRKLVKLFERDDIA---IYNSIPTVEGTIMLAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALG 180 (300)
T ss_dssp ESSCCHHHHHHHHHTTCCEEEGGGSHHHH---HHHHHHHHHHHHHHHHHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTT
T ss_pred EecCCHHHHHHHHHCCCEEEeecCCCceE---EEcCccHHHHHHHHHHHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCC
Confidence 3334455 778888887 4456 2211 111111223344321111234689999999999999999999999999
Q ss_pred CEEEEEeCCchhHHHHhhcCCcc---cCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCCh
Q 037949 88 ARVMGTEIDLICALQALTEGIPV---LTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDM 159 (243)
Q Consensus 88 a~V~v~d~~~~r~~~a~~~G~~~---~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~ 159 (243)
++|+++|+++.+...+...|+++ .++++.++++|+|+.|++. ++++.+.++.|+++++++|+++++...+.
T Consensus 181 ~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~~i~~~~~~~mk~g~~lin~a~g~~~~~~ 254 (300)
T 2rir_A 181 ANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-MILNQTVLSSMTPKTLILDLASRPGGTDF 254 (300)
T ss_dssp CEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-CCBCHHHHTTSCTTCEEEECSSTTCSBCH
T ss_pred CEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-hhhCHHHHHhCCCCCEEEEEeCCCCCcCH
Confidence 99999999987765555567653 3466778899999999876 66777789999999999999997654554
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.43 E-value=7e-13 Score=119.66 Aligned_cols=103 Identities=17% Similarity=0.239 Sum_probs=87.2
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-CHHhhhcCCcEEEEccC----Chhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-TREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+++.. ..+...|++.. ++++.++++|+|+.|+. +.++++
T Consensus 156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~ 234 (352)
T 3gg9_A 156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIIT 234 (352)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhC
Confidence 3578999999999999999999999999999999988643 45566787655 78899999999999864 456788
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.|+.||++++++|+|+++ .+|.+++..
T Consensus 235 ~~~l~~mk~gailIN~aRg~-~vd~~aL~~ 263 (352)
T 3gg9_A 235 VADLTRMKPTALFVNTSRAE-LVEENGMVT 263 (352)
T ss_dssp HHHHTTSCTTCEEEECSCGG-GBCTTHHHH
T ss_pred HHHHhhCCCCcEEEECCCch-hhcHHHHHH
Confidence 88899999999999999986 377776654
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.9e-13 Score=120.03 Aligned_cols=103 Identities=22% Similarity=0.321 Sum_probs=83.3
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+++.... .....+...++++.++++|+|+.|+. +.++++.
T Consensus 133 ~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~ 211 (324)
T 3evt_A 133 STLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPAD-HFHETVAFTATADALATANFIVNALPLTPTTHHLFST 211 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCT-TCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSH
T ss_pred ccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhH-hHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCH
Confidence 368899999999999999999999999999999999876431 11111223456788889999999864 3567888
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|+.||++++++|+|+++ .+|.+++..
T Consensus 212 ~~l~~mk~gailIN~aRG~-~vd~~aL~~ 239 (324)
T 3evt_A 212 ELFQQTKQQPMLINIGRGP-AVDTTALMT 239 (324)
T ss_dssp HHHHTCCSCCEEEECSCGG-GBCHHHHHH
T ss_pred HHHhcCCCCCEEEEcCCCh-hhhHHHHHH
Confidence 8899999999999999986 478887765
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-12 Score=115.39 Aligned_cols=102 Identities=15% Similarity=0.133 Sum_probs=85.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC-CchhHHHHhhcCCccc-CHHhhhcCCcEEEEccC----Chhccc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI-DLICALQALTEGIPVL-TREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~-~~~r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
.+.|++++|+|+|.||..+|+.++++|++|+++|+ ++.+. .+...|+... ++++.+.++|+|+.|+. +.++++
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~ 221 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFN 221 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcC
Confidence 58999999999999999999999999999999999 87653 4555677655 68888889999999865 456787
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.++.||++++++|+|++. .+|..++..
T Consensus 222 ~~~l~~mk~gailIn~arg~-~vd~~aL~~ 250 (320)
T 1gdh_A 222 KATIKSLPQGAIVVNTARGD-LVDNELVVA 250 (320)
T ss_dssp HHHHTTSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCc-ccCHHHHHH
Confidence 77899999999999999975 477776654
|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-12 Score=118.19 Aligned_cols=101 Identities=21% Similarity=0.241 Sum_probs=85.6
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
..+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.. ....+....++++++.++|+|+.|+. +.++++.
T Consensus 144 ~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~ 220 (343)
T 2yq5_A 144 NEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP---EFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGE 220 (343)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG---GGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred cccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh---hhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhH
Confidence 3578999999999999999999999999999999998764 22234455588899999999999864 4678888
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|+.||++++++|+|+++ .+|.+++..
T Consensus 221 ~~l~~mk~gailIN~aRg~-~vd~~aL~~ 248 (343)
T 2yq5_A 221 KQLKEMKKSAYLINCARGE-LVDTGALIK 248 (343)
T ss_dssp HHHHHSCTTCEEEECSCGG-GBCHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCh-hhhHHHHHH
Confidence 8899999999999999996 478887755
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=99.41 E-value=2.6e-12 Score=117.41 Aligned_cols=104 Identities=13% Similarity=0.093 Sum_probs=87.3
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccC----Chhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+++.....+...|+.. .++++.++.+|+|+.++. +.++++
T Consensus 187 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~ 266 (393)
T 2nac_A 187 YDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMIN 266 (393)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBS
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhh
Confidence 358999999999999999999999999999999999875554555667754 468888999999999864 457788
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.|+.||++++++|+|++. .+|.+++..
T Consensus 267 ~~~l~~mk~gailIN~aRG~-~vde~aL~~ 295 (393)
T 2nac_A 267 DETLKLFKRGAYIVNTARGK-LCDRDAVAR 295 (393)
T ss_dssp HHHHTTSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred HHHHhhCCCCCEEEECCCch-HhhHHHHHH
Confidence 77899999999999999986 478777754
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1.7e-12 Score=117.70 Aligned_cols=104 Identities=16% Similarity=0.168 Sum_probs=87.2
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCC----hhcc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTEN----ADII 133 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~----~~~i 133 (243)
..+.|++|+|+|+|.||+.+|+.++++|++ |+++|+++.....+...|+.. .++++.++.+|+|+.|+.. .+++
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li 239 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLI 239 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCB
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHh
Confidence 358999999999999999999999999997 999999876554555667654 3688888999999998643 4778
Q ss_pred cHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 134 MVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.+.|+.||++++++|+|+++ .+|.+++..
T Consensus 240 ~~~~l~~mk~ga~lIn~arG~-~vd~~aL~~ 269 (364)
T 2j6i_A 240 NKELLSKFKKGAWLVNTARGA-ICVAEDVAA 269 (364)
T ss_dssp CHHHHTTSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred CHHHHhhCCCCCEEEECCCCc-hhCHHHHHH
Confidence 878899999999999999986 478877754
|
| >1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=2.7e-12 Score=115.00 Aligned_cols=101 Identities=20% Similarity=0.239 Sum_probs=84.0
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+++... + ..++...++++.++.+|+|+.|+. +.++++.
T Consensus 141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~ 217 (333)
T 1dxy_A 141 KELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINE 217 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCH
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-HhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCH
Confidence 35899999999999999999999999999999999987643 1 122344578888899999999865 4567887
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.||++++++|+|+++ .+|.+++..
T Consensus 218 ~~l~~mk~ga~lIn~srg~-~vd~~aL~~ 245 (333)
T 1dxy_A 218 AAFNLMKPGAIVINTARPN-LIDTQAMLS 245 (333)
T ss_dssp HHHHHSCTTEEEEECSCTT-SBCHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCc-ccCHHHHHH
Confidence 8899999999999999986 478887765
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.5e-12 Score=115.51 Aligned_cols=99 Identities=17% Similarity=0.180 Sum_probs=72.9
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccC----Chhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+++.+. .++. ..+++++++++|+|+.|+. +.++++
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~ 241 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG-----VDWIAHQSPVDLARDSDVLAVCVAASAATQNIVD 241 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT-----SCCEECSSHHHHHHTCSEEEECC----------C
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc-----cCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhh
Confidence 36889999999999999999999999999999999987641 2333 3468888999999999865 456788
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.++.||++++++|+++++. +|.+++..
T Consensus 242 ~~~l~~mk~gailIN~aRG~v-vde~aL~~ 270 (340)
T 4dgs_A 242 ASLLQALGPEGIVVNVARGNV-VDEDALIE 270 (340)
T ss_dssp HHHHHHTTTTCEEEECSCC-----------
T ss_pred HHHHhcCCCCCEEEECCCCcc-cCHHHHHH
Confidence 888999999999999999963 77777754
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=99.38 E-value=6.5e-13 Score=118.58 Aligned_cols=103 Identities=18% Similarity=0.268 Sum_probs=83.3
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+++.... ....+....++++.++++|+|+.++. +.++++.
T Consensus 136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~ 214 (324)
T 3hg7_A 136 QGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERA-GFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTA 214 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCT-TCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCT
T ss_pred cccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhh-hhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHH
Confidence 368899999999999999999999999999999999874321 11112234567888999999999864 4567888
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|+.||+|++++|+|+++ .+|.+++..
T Consensus 215 ~~l~~mk~gailIN~aRG~-~vde~aL~~ 242 (324)
T 3hg7_A 215 SRFEHCKPGAILFNVGRGN-AINEGDLLT 242 (324)
T ss_dssp TTTTCSCTTCEEEECSCGG-GBCHHHHHH
T ss_pred HHHhcCCCCcEEEECCCch-hhCHHHHHH
Confidence 8899999999999999996 478887755
|
| >3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.3e-12 Score=117.20 Aligned_cols=101 Identities=20% Similarity=0.206 Sum_probs=84.4
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC--------Ch
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE--------NA 130 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G--------~~ 130 (243)
+..+.|++++|+|+|.||+.+|+.++++|++|+++|+.... ...+....+++++++++|+|+.++. +.
T Consensus 114 g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~----~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~ 189 (381)
T 3oet_A 114 GFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAA----RGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTL 189 (381)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHH----TTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCT
T ss_pred CCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHH----hccCcccCCHHHHHhhCCEEEEcCcCCccccccch
Confidence 34689999999999999999999999999999999774321 1234456678899999999999864 66
Q ss_pred hcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
++++.+.|+.||+|+++||+|+++ .+|.+++..
T Consensus 190 ~li~~~~l~~mk~gailIN~aRG~-vvde~aL~~ 222 (381)
T 3oet_A 190 HLADETLIRRLKPGAILINACRGP-VVDNAALLA 222 (381)
T ss_dssp TSBCHHHHHHSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred hhcCHHHHhcCCCCcEEEECCCCc-ccCHHHHHH
Confidence 789888999999999999999996 488888755
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=5.2e-12 Score=113.09 Aligned_cols=100 Identities=15% Similarity=0.191 Sum_probs=83.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-CHHhhhcCCcEEEEccC----ChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-TREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
.+.|++++|+|+|.||+.+|+.++++|++|+++|+++.+. +.. ++... ++++.+.++|+|+.|+. +.++++.
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~ 219 (333)
T 1j4a_A 143 EVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK-KGYYVDSLDDLYKQADVISLHVPDVPANVHMIND 219 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH-TTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSH
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh-hCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhH
Confidence 5889999999999999999999999999999999988654 222 34444 68888889999999875 3466877
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.||++++++|+|+++ .+|.+++..
T Consensus 220 ~~l~~mk~ga~lIn~arg~-~vd~~aL~~ 247 (333)
T 1j4a_A 220 ESIAKMKQDVVIVNVSRGP-LVDTDAVIR 247 (333)
T ss_dssp HHHHHSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCc-ccCHHHHHH
Confidence 7899999999999999986 478877755
|
| >3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.5e-12 Score=118.24 Aligned_cols=100 Identities=15% Similarity=0.248 Sum_probs=82.0
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-cccCHHhhhcCCcEEEEccC----Chhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-PVLTREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~~~~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
..+.|++++|+|+|.||..+|+.++++|++|+++|+++... ..+. .+.++++.++.+|+|+.|+. +.++++
T Consensus 152 ~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~----~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~ 227 (416)
T 3k5p_A 152 REVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ----YGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLIT 227 (416)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC----BTTBEECSSHHHHHHHCSEEEECCCC-----CCBC
T ss_pred ccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc----ccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcC
Confidence 35789999999999999999999999999999999875421 1122 24578889999999999864 457888
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.|+.||+|++++|+++++ .+|.+++..
T Consensus 228 ~~~l~~mk~gailIN~aRG~-vvd~~aL~~ 256 (416)
T 3k5p_A 228 EAKLRKMKKGAFLINNARGS-DVDLEALAK 256 (416)
T ss_dssp HHHHHHSCTTEEEEECSCTT-SBCHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCh-hhhHHHHHH
Confidence 88899999999999999996 478877754
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=99.37 E-value=7.1e-12 Score=112.84 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=86.2
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHH-hCCCEEEEEeCCchhHHHHhhcCCccc-CHHhhhcCCcEEEEccC----Chhcc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALK-AVGARVMGTEIDLICALQALTEGIPVL-TREDVVSEAGLFVTTTE----NADII 133 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~-~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G----~~~~i 133 (243)
..+.|++++|+|+|.||+.+|+.++ ++|++|+++|+++.+...+...|+... ++++.++.+|+|+.|+. +.+++
T Consensus 159 ~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li 238 (348)
T 2w2k_A 159 HNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLI 238 (348)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCB
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHh
Confidence 3589999999999999999999999 999999999998766544555576544 67888889999999964 34678
Q ss_pred cHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 134 MVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.+.++.|+++++++|++++. .+|.+++..
T Consensus 239 ~~~~l~~mk~gailin~srg~-~vd~~aL~~ 268 (348)
T 2w2k_A 239 DEAFFAAMKPGSRIVNTARGP-VISQDALIA 268 (348)
T ss_dssp CHHHHHHSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred hHHHHhcCCCCCEEEECCCCc-hhCHHHHHH
Confidence 777899999999999999986 367776654
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=99.36 E-value=9.4e-13 Score=117.12 Aligned_cols=99 Identities=18% Similarity=0.126 Sum_probs=82.3
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc----ccCHHhhhcCCcEEEEccC----Chh
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP----VLTREDVVSEAGLFVTTTE----NAD 131 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~----~~~~~~~~~~aDvvi~a~G----~~~ 131 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+++... .++. ..++++.++++|+|+.++. +.+
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~ 209 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSW-----PGVESYVGREELRAFLNQTRVLINLLPNTAQTVG 209 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCC-----TTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTT
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhh-----hhhhhhcccCCHHHHHhhCCEEEEecCCchhhhh
Confidence 35789999999999999999999999999999999987642 1221 1356788899999999864 456
Q ss_pred cccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+++.+.|+.||++++++|+|+++ .+|.+++..
T Consensus 210 li~~~~l~~mk~gailIN~aRG~-~vd~~aL~~ 241 (315)
T 3pp8_A 210 IINSELLDQLPDGAYVLNLARGV-HVQEADLLA 241 (315)
T ss_dssp CBSHHHHTTSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred hccHHHHhhCCCCCEEEECCCCh-hhhHHHHHH
Confidence 78888899999999999999996 478887754
|
| >1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=6.6e-12 Score=115.21 Aligned_cols=100 Identities=15% Similarity=0.179 Sum_probs=82.6
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccC----Chhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
..+.|++++|+|+|.||..+|++++++|++|+++|+++... ..++. +.++++.++.+|+|+.|+. +.++++
T Consensus 141 ~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 216 (404)
T 1sc6_A 141 FEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMG 216 (404)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBC
T ss_pred cccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----cCCceecCCHHHHHhcCCEEEEccCCChHHHHHhh
Confidence 35899999999999999999999999999999999876431 11243 3478888999999999863 457888
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.|+.||+|++++|+++++ .+|.+++..
T Consensus 217 ~~~l~~mk~ga~lIN~aRg~-~vd~~aL~~ 245 (404)
T 1sc6_A 217 AKEISLMKPGSLLINASRGT-VVDIPALAD 245 (404)
T ss_dssp HHHHHHSCTTEEEEECSCSS-SBCHHHHHH
T ss_pred HHHHhhcCCCeEEEECCCCh-HHhHHHHHH
Confidence 88899999999999999986 478777654
|
| >1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} | Back alignment and structure |
|---|
Probab=99.34 E-value=5.9e-12 Score=112.65 Aligned_cols=100 Identities=19% Similarity=0.298 Sum_probs=83.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+|+.++++|++|+++|+++.+. + ..++...++++.+..+|+|+.|+. +.++++.+
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~ 219 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRD 219 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-HhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHH
Confidence 5789999999999999999999999999999999987643 1 222344578888889999999854 35778878
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.++.||++++++|+|+++ .+|.+++..
T Consensus 220 ~l~~mk~ga~lin~srg~-~vd~~aL~~ 246 (331)
T 1xdw_A 220 FLKKMKDGAILVNCARGQ-LVDTEAVIE 246 (331)
T ss_dssp HHHTSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred HHhhCCCCcEEEECCCcc-cccHHHHHH
Confidence 899999999999999986 478877754
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.2e-11 Score=109.64 Aligned_cols=102 Identities=24% Similarity=0.197 Sum_probs=84.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
.+.|++++|+|+|.||+.+|+.++++|++|+++|+++.+. .+...|++. .++++.+..+|+|+.++. +.++++.
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~ 243 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIND 243 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSH
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHH
Confidence 5789999999999999999999999999999999876543 334457653 478888899999999864 3567877
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.||++++++|+++++ .+|.+++..
T Consensus 244 ~~l~~mk~gailIN~arg~-~vd~~aL~~ 271 (347)
T 1mx3_A 244 FTVKQMRQGAFLVNTARGG-LVDEKALAQ 271 (347)
T ss_dssp HHHTTSCTTEEEEECSCTT-SBCHHHHHH
T ss_pred HHHhcCCCCCEEEECCCCh-HHhHHHHHH
Confidence 8899999999999999996 478777754
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.31 E-value=4.7e-12 Score=113.18 Aligned_cols=141 Identities=13% Similarity=0.068 Sum_probs=103.5
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-HHhhhcCCcEEEEcc
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-REDVVSEAGLFVTTT 127 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-~~~~~~~aDvvi~a~ 127 (243)
.|+++.+.. ..+|++|+|+|+|+||+.+++.++.+|++|++++.++.+++.+.+.|++ ++. .++..+++|++++|+
T Consensus 165 a~~~l~~~~--~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~ 242 (348)
T 3two_A 165 TYSPLKFSK--VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTI 242 (348)
T ss_dssp HHHHHHHTT--CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECC
T ss_pred HHHHHHhcC--CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECC
Confidence 367776552 4689999999999999999999999999999999999999888889986 332 222223799999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC-CC---CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD-NE---IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~-~~---id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
|.+..++ ..++.++++|+++.+|... .. ++...+... ++..+.. +..+...+..++++++++|++
T Consensus 243 g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~---~~~~i~g-~~~~~~~~~~~~~~l~~~g~l 311 (348)
T 3two_A 243 PTHYDLK-DYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHL---GNRKVYG-SLIGGIKETQEMVDFSIKHNI 311 (348)
T ss_dssp CSCCCHH-HHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHT---CSCEEEE-CCSCCHHHHHHHHHHHHHTTC
T ss_pred CcHHHHH-HHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhh---CCeEEEE-EecCCHHHHHHHHHHHHhCCC
Confidence 9987775 5799999999999999765 33 343444411 3333433 212233344447899999987
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-11 Score=109.53 Aligned_cols=139 Identities=19% Similarity=0.225 Sum_probs=101.5
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHh---hh--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----RED---VV-- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~---~~-- 117 (243)
.++++.+.. ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.+...|++ +++ ..+ .+
T Consensus 160 a~~al~~~~--~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 160 GIHACRRGG--VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEG 237 (356)
T ss_dssp HHHHHHHHT--CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHH
T ss_pred HHHHHHhcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHH
Confidence 467775443 4689999999999999999999999999 999999999998888888875 322 111 11
Q ss_pred ---cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh
Q 037949 118 ---SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL 192 (243)
Q Consensus 118 ---~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll 192 (243)
.++|++++++|.+..+. ..++.++++|+++.+|... ..++...+.. ++ +.+.... .+ ..+..++++++
T Consensus 238 ~~~~g~D~vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~-~~---~~i~g~~-~~-~~~~~~~~~l~ 310 (356)
T 1pl8_A 238 QLGCKPEVTIECTGAEASIQ-AGIYATRSGGTLVLVGLGSEMTTVPLLHAAI-RE---VDIKGVF-RY-CNTWPVAISML 310 (356)
T ss_dssp HHTSCCSEEEECSCCHHHHH-HHHHHSCTTCEEEECSCCCSCCCCCHHHHHH-TT---CEEEECC-SC-SSCHHHHHHHH
T ss_pred HhCCCCCEEEECCCChHHHH-HHHHHhcCCCEEEEEecCCCCCccCHHHHHh-cc---eEEEEec-cc-HHHHHHHHHHH
Confidence 36999999999877665 5799999999999999754 3355555544 23 3333211 12 23344478999
Q ss_pred hcCCe
Q 037949 193 AERLL 197 (243)
Q Consensus 193 ~~G~i 197 (243)
++|++
T Consensus 311 ~~g~i 315 (356)
T 1pl8_A 311 ASKSV 315 (356)
T ss_dssp HTTSC
T ss_pred HcCCC
Confidence 99987
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-11 Score=111.49 Aligned_cols=180 Identities=19% Similarity=0.104 Sum_probs=116.3
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|+++........+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.+.+.|++ +++ ..+.+
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~ 279 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTN 279 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTT
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhC
Confidence 456664322124689999999999999999999999999 999999999999888888985 333 22221
Q ss_pred -cCCcEEEEccCChh-cccHHHHccC----CCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhH
Q 037949 118 -SEAGLFVTTTENAD-IIMVRHMKQM----KNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGI 189 (243)
Q Consensus 118 -~~aDvvi~a~G~~~-~i~~~~l~~l----~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai 189 (243)
.++|++++|+|.+. .+. ..++.+ +++|+++.+|... ..++...+.. ++ ..+..........+..+++
T Consensus 280 g~g~D~vid~~g~~~~~~~-~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~-~~---~~i~g~~~~~~~~~~~~~~ 354 (404)
T 3ip1_A 280 GLGAKLFLEATGVPQLVWP-QIEEVIWRARGINATVAIVARADAKIPLTGEVFQV-RR---AQIVGSQGHSGHGTFPRVI 354 (404)
T ss_dssp TCCCSEEEECSSCHHHHHH-HHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHH-TT---CEEEECCCCCSTTHHHHHH
T ss_pred CCCCCEEEECCCCcHHHHH-HHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhc-cc---eEEEEecCCCchHHHHHHH
Confidence 26999999999873 343 355666 9999999999764 3466665554 23 3333221111122334478
Q ss_pred HhhhcCCeecccCCCCCccccccchHHHHH-HHHhcCCCCCccccCCHHHH
Q 037949 190 IILAERLLMNLGCPTGHPSFVMSCSFTNQA-AALHLGKPGDKFRKLTPEQA 239 (243)
Q Consensus 190 ~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~ 239 (243)
+++++| + .+.... +.+..+.-..++ ..+.-||.-+++..-.++|.
T Consensus 355 ~ll~~g-l-~~~~~i---~~~~~l~~~~~A~~~~~~GKvvl~~~~~~~~~~ 400 (404)
T 3ip1_A 355 SLMASG-M-DMTKII---SKTVSMEEIPEYIKRLQTDKSLVKVTMLNEGHH 400 (404)
T ss_dssp HHHHTT-C-CGGGGC---CEEECGGGHHHHHHHTTTCTTCSCEEEECC---
T ss_pred HHHHcC-C-ChhheE---EEEeeHHHHHHHHHHHhCCcEEEecCCCCCccc
Confidence 999999 4 543221 223333333333 33446788888877777664
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=99.29 E-value=5.9e-12 Score=110.75 Aligned_cols=98 Identities=17% Similarity=0.225 Sum_probs=82.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
.+.|++++|+|+|.||..+|+.++++|++|+++|+++.... ..+. .++++.++++|+|+.|+. +.++++.
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~ 193 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQN-----VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNS 193 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTT-----CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSH
T ss_pred eeecchheeeccCchhHHHHHHHHhhCcEEEEEeccccccc-----cccccCChHHHhhccCeEEEEeeccccchhhhhH
Confidence 57899999999999999999999999999999999876431 1333 368888999999999865 3567888
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.||++++++|+|+++ .+|.+++..
T Consensus 194 ~~l~~mk~gailIN~aRG~-~vd~~aL~~ 221 (290)
T 3gvx_A 194 RLLANARKNLTIVNVARAD-VVSKPDMIG 221 (290)
T ss_dssp HHHTTCCTTCEEEECSCGG-GBCHHHHHH
T ss_pred HHHhhhhcCceEEEeehhc-ccCCcchhh
Confidence 8899999999999999986 478877755
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=3.2e-11 Score=107.98 Aligned_cols=102 Identities=22% Similarity=0.182 Sum_probs=84.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCC----hhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTEN----ADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~----~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+|+.++.+|++|+++|+++.+ ..+...|+...++++.+.++|+|+.|+.. .++++.+
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~ 225 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEE 225 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHH
Confidence 578999999999999999999999999999999998876 44445576656788888899999999753 4567766
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.++.|+++++++|++++. .+|...+..
T Consensus 226 ~~~~mk~~ailIn~srg~-~v~~~aL~~ 252 (334)
T 2dbq_A 226 RLKLMKKTAILINIARGK-VVDTNALVK 252 (334)
T ss_dssp HHHHSCTTCEEEECSCGG-GBCHHHHHH
T ss_pred HHhcCCCCcEEEECCCCc-ccCHHHHHH
Confidence 789999999999999885 467666643
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2.1e-11 Score=108.88 Aligned_cols=103 Identities=17% Similarity=0.177 Sum_probs=84.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+|+.++.+|++|+++|+++.+...+...|+...++++.+.++|+|+.|+. +.++++.+
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~ 231 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKD 231 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHH
Confidence 57899999999999999999999999999999999876554454556654578888889999999975 35667767
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.++.|+++++++|++++. .+|.+.+..
T Consensus 232 ~~~~mk~gailIn~srg~-~v~~~aL~~ 258 (330)
T 2gcg_A 232 FFQKMKETAVFINISRGD-VVNQDDLYQ 258 (330)
T ss_dssp HHHHSCTTCEEEECSCGG-GBCHHHHHH
T ss_pred HHhcCCCCcEEEECCCCc-ccCHHHHHH
Confidence 789999999999999985 367766654
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.5e-11 Score=111.95 Aligned_cols=92 Identities=20% Similarity=0.235 Sum_probs=77.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc---C-------------------------
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL---T------------------------- 112 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~---~------------------------- 112 (243)
.++|++|+|+|+|+||+.+++.++.+|++|+++|+++.+++.+...|.+.. .
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 468999999999999999999999999999999999988777777776533 1
Q ss_pred --HHhhhcCCcEEEEcc---CC--hhcccHHHHccCCCCeEEEEecC
Q 037949 113 --REDVVSEAGLFVTTT---EN--ADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 113 --~~~~~~~aDvvi~a~---G~--~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
+.+.+.++|+||+|+ |. +.+++.+.++.|+++++++++|.
T Consensus 249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence 345567899999998 53 34677788999999999999994
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.5e-11 Score=112.69 Aligned_cols=91 Identities=19% Similarity=0.218 Sum_probs=76.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC----------------------------H
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT----------------------------R 113 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~----------------------------~ 113 (243)
++|++|+|+|+|+||+.+++.++.+|++|+++|+++.++..+...|.+.+. +
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 579999999999999999999999999999999999987777777765331 3
Q ss_pred HhhhcCCcEEEEccCC-----hhcccHHHHccCCCCeEEEEecC
Q 037949 114 EDVVSEAGLFVTTTEN-----ADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 114 ~~~~~~aDvvi~a~G~-----~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.+.+.++|+||+|++. +.+++.+.++.|+++++++++|.
T Consensus 250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence 4456689999999633 35677789999999999999994
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.28 E-value=2e-11 Score=108.35 Aligned_cols=97 Identities=23% Similarity=0.228 Sum_probs=81.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+|+.++++|++|+++|+++.+.. +...++++.++.+|+|+.|+. +.++++.+
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~ 214 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------YPFLSLEELLKEADVVSLHTPLTPETHRLLNRE 214 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHH
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHH
Confidence 57999999999999999999999999999999999876532 234567888889999999853 45678777
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.++.||++++++|+|+++ .+|.+++..
T Consensus 215 ~l~~mk~ga~lin~srg~-~vd~~aL~~ 241 (311)
T 2cuk_A 215 RLFAMKRGAILLNTARGA-LVDTEALVE 241 (311)
T ss_dssp HHTTSCTTCEEEECSCGG-GBCHHHHHH
T ss_pred HHhhCCCCcEEEECCCCC-ccCHHHHHH
Confidence 899999999999999975 477777755
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.5e-11 Score=108.61 Aligned_cols=102 Identities=15% Similarity=0.160 Sum_probs=83.6
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCC----hhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTEN----ADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~----~~~i~~ 135 (243)
..+.|++++|+|+|.||..+|+.++++|++|+++|+++.+ ..+...|+...++++.+.++|+|+.|+.. .++++.
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~ 220 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINE 220 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCH
Confidence 3589999999999999999999999999999999998876 44445566555788888899999999753 467876
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.|+++ +++|++++. .+|..++..
T Consensus 221 ~~~~~mk~g-ilin~srg~-~vd~~aL~~ 247 (333)
T 2d0i_A 221 ERVKKLEGK-YLVNIGRGA-LVDEKAVTE 247 (333)
T ss_dssp HHHHHTBTC-EEEECSCGG-GBCHHHHHH
T ss_pred HHHhhCCCC-EEEECCCCc-ccCHHHHHH
Confidence 678999999 999999885 467766543
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=99.27 E-value=9e-12 Score=111.18 Aligned_cols=139 Identities=12% Similarity=0.100 Sum_probs=100.8
Q ss_pred hhhhhhh----ccccccCcEEEEEcCChHHHHHHHHHHhC--CCEEEEEeCCchhHHHHhhcCCc-ccCHHh---h---h
Q 037949 51 PDGLMRA----TDITIAGKIAVDCGHGDVGRGCAAALKAV--GARVMGTEIDLICALQALTEGIP-VLTRED---V---V 117 (243)
Q Consensus 51 ~~av~~~----~~~~l~g~~vlViG~G~IG~~~A~~l~~~--Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~---~---~ 117 (243)
|+++.+. .. . +|++|+|+|+|+||+.+++.++.+ |++|++++.++.+++.+.+.|++ +++..+ . +
T Consensus 156 ~~al~~~~~~~~~-~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~ 233 (344)
T 2h6e_A 156 MGAIRQALPFISK-F-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKL 233 (344)
T ss_dssp HHHHHHHHHHHTT-C-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHH
T ss_pred HHHHHhhhhcccC-C-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHh
Confidence 6676654 13 4 899999999999999999999999 99999999999998888888875 444322 1 2
Q ss_pred c---CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh
Q 037949 118 S---EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL 192 (243)
Q Consensus 118 ~---~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll 192 (243)
. ++|++++|+|.+..+. ..++.++++|+++.+|... ..++...+.. ++ ..+.... .+...+..++++++
T Consensus 234 ~~g~g~D~vid~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~-~~---~~i~g~~-~~~~~~~~~~~~l~ 307 (344)
T 2h6e_A 234 TDGLGASIAIDLVGTEETTY-NLGKLLAQEGAIILVGMEGKRVSLEAFDTAV-WN---KKLLGSN-YGSLNDLEDVVRLS 307 (344)
T ss_dssp HTTCCEEEEEESSCCHHHHH-HHHHHEEEEEEEEECCCCSSCCCCCHHHHHH-TT---CEEEECC-SCCHHHHHHHHHHH
T ss_pred hcCCCccEEEECCCChHHHH-HHHHHhhcCCEEEEeCCCCCCcccCHHHHhh-CC---cEEEEEe-cCCHHHHHHHHHHH
Confidence 1 6899999999886665 5799999999999999764 2355555444 23 3333211 11222334478999
Q ss_pred hcCCe
Q 037949 193 AERLL 197 (243)
Q Consensus 193 ~~G~i 197 (243)
++|++
T Consensus 308 ~~g~i 312 (344)
T 2h6e_A 308 ESGKI 312 (344)
T ss_dssp HTTSS
T ss_pred HcCCC
Confidence 99986
|
| >1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=5.1e-11 Score=112.80 Aligned_cols=153 Identities=18% Similarity=0.196 Sum_probs=107.3
Q ss_pred eeecchhCHHH--HHHHHHcCC--CCCc----hhHHhhHHHh-----------hhccccchhhhhhhhccccccCcEEEE
Q 037949 9 VSEETTMGVKR--LYQMQANGT--LLFS----EETTTLLFDN-----------LYGFRHSLPDGLMRATDITIAGKIAVD 69 (243)
Q Consensus 9 ~~E~T~tG~~~--~~~~~~~~~--l~~p----~s~~k~~~~~-----------~~~~~~~~~~av~~~~~~~l~g~~vlV 69 (243)
++=....|+.. ++.+.++|. .+.| .+...+.+.. ....+++-|..-. ..+..+.|++++|
T Consensus 69 ~i~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~-~~~~~l~g~~vgI 147 (529)
T 1ygy_A 69 IVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSS-FSGTEIFGKTVGV 147 (529)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGG-CCBCCCTTCEEEE
T ss_pred EEEECCcCcCccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccC-cCccccCCCEEEE
Confidence 33344556554 577778887 4556 3332222222 2223333343111 1123588999999
Q ss_pred EcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHHHHccCCCCe
Q 037949 70 CGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVRHMKQMKNAA 145 (243)
Q Consensus 70 iG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~~l~~l~~g~ 145 (243)
+|+|.||..+|+.++++|++|+++|+++.+ ..+...|+...++++.+..+|+|+.|+. +.++++.+.+..||+++
T Consensus 148 IG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ 226 (529)
T 1ygy_A 148 VGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGV 226 (529)
T ss_dssp ECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTE
T ss_pred EeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCC
Confidence 999999999999999999999999998753 3456668765678888899999999974 45678766789999999
Q ss_pred EEEEecCCCCCCChhHHHH
Q 037949 146 IVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 146 ~vvnvg~~~~~id~~~l~~ 164 (243)
+++|+|++. .+|..++..
T Consensus 227 ilin~arg~-iv~~~aL~~ 244 (529)
T 1ygy_A 227 IIVNAARGG-LVDEAALAD 244 (529)
T ss_dssp EEEECSCTT-SBCHHHHHH
T ss_pred EEEECCCCc-hhhHHHHHH
Confidence 999999886 477766544
|
| >2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.8e-11 Score=111.40 Aligned_cols=100 Identities=15% Similarity=0.183 Sum_probs=83.2
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC--------Chh
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE--------NAD 131 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G--------~~~ 131 (243)
..+.|++|+|+|+|.||..+|+.++++|++|+++|+++... ..|....++++.+.++|+|+.|+. +.+
T Consensus 112 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~ 187 (380)
T 2o4c_A 112 ADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR----EPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRH 187 (380)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH----STTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTT
T ss_pred cccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh----ccCcccCCHHHHHHhCCEEEEeccCccccccchhh
Confidence 36899999999999999999999999999999998755421 234455678888889999999863 567
Q ss_pred cccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+++.+.++.||+|++++|+|+++ .+|.+++..
T Consensus 188 li~~~~l~~mk~gailIN~sRG~-vvd~~aL~~ 219 (380)
T 2o4c_A 188 LLDEPRLAALRPGTWLVNASRGA-VVDNQALRR 219 (380)
T ss_dssp SBCHHHHHTSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred hcCHHHHhhCCCCcEEEECCCCc-ccCHHHHHH
Confidence 78888899999999999999986 478777754
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=9e-12 Score=112.35 Aligned_cols=140 Identities=16% Similarity=0.098 Sum_probs=99.2
Q ss_pred hhhhhhhhccccc-cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCc-ccC---H---HhhhcCC
Q 037949 50 LPDGLMRATDITI-AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIP-VLT---R---EDVVSEA 120 (243)
Q Consensus 50 ~~~av~~~~~~~l-~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~-~~~---~---~~~~~~a 120 (243)
.|+++.+. . .. +|++|+|+|+|+||+.+++.++.+|++|++++.++.+++.+. ..|++ +++ . .+...++
T Consensus 175 a~~al~~~-~-~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~ 252 (366)
T 1yqd_A 175 VYSPLKYF-G-LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTL 252 (366)
T ss_dssp HHHHHHHT-T-CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCE
T ss_pred HHHHHHhc-C-cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCC
Confidence 35666554 2 34 899999999999999999999999999999999998887766 67875 332 1 1223478
Q ss_pred cEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC--CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
|++++++|....+. ..++.++++|+++++|..... ++...+.. ++ ..+... ..+...+..+++.++++|++
T Consensus 253 D~vid~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~-~~---~~i~g~-~~~~~~~~~~~~~l~~~g~l 325 (366)
T 1yqd_A 253 DGIIDTVSAVHPLL-PLFGLLKSHGKLILVGAPEKPLELPAFSLIA-GR---KIVAGS-GIGGMKETQEMIDFAAKHNI 325 (366)
T ss_dssp EEEEECCSSCCCSH-HHHHHEEEEEEEEECCCCSSCEEECHHHHHT-TT---CEEEEC-CSCCHHHHHHHHHHHHHTTC
T ss_pred CEEEECCCcHHHHH-HHHHHHhcCCEEEEEccCCCCCCcCHHHHHh-CC---cEEEEe-cCCCHHHHHHHHHHHHcCCC
Confidence 99999999876665 579999999999999976432 44444433 22 333321 11222233337889999987
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=8.3e-12 Score=112.83 Aligned_cols=140 Identities=16% Similarity=0.103 Sum_probs=99.2
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH------HhhhcCCcE
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR------EDVVSEAGL 122 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~------~~~~~~aDv 122 (243)
.|+++.+. . ..+|++|+|+|+|+||+.+++.++.+|++|++++.++.+++.+.+.|++ +++. ++...++|+
T Consensus 183 A~~al~~~-~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dv 260 (369)
T 1uuf_A 183 TYSPLRHW-Q-AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDF 260 (369)
T ss_dssp HHHHHHHT-T-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEE
T ss_pred HHHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCE
Confidence 36677654 2 4589999999999999999999999999999999999998888888875 3321 112247899
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCCC---CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN---EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~---~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+++|+|.+..+. ..++.++++|+++.+|.... .++...+.. ++ +.+.... .+...+..++++++++|++
T Consensus 261 vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~-~~---~~i~g~~-~~~~~~~~~~~~l~~~g~i 332 (369)
T 1uuf_A 261 ILNTVAAPHNLD-DFTTLLKRDGTMTLVGAPATPHKSPEVFNLIM-KR---RAIAGSM-IGGIPETQEMLDFCAEHGI 332 (369)
T ss_dssp EEECCSSCCCHH-HHHTTEEEEEEEEECCCC-------CHHHHHT-TT---CEEEECC-SCCHHHHHHHHHHHHHHTC
T ss_pred EEECCCCHHHHH-HHHHHhccCCEEEEeccCCCCccccCHHHHHh-CC---cEEEEee-cCCHHHHHHHHHHHHhCCC
Confidence 999999876665 57999999999999997642 345444433 23 3333211 1222233447889999986
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=5.6e-11 Score=106.31 Aligned_cols=139 Identities=18% Similarity=0.121 Sum_probs=100.8
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH-------Hh---hh-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR-------ED---VV- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~---~~- 117 (243)
.|+++.++. ..+|++|+|+|+|+||+.+++.++.+|++|++++.++.+++.+...|++ +++. ++ ..
T Consensus 157 a~~al~~~~--~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 157 GVHACRRAG--VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp HHHHHHHHT--CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHH
T ss_pred HHHHHHhcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhc
Confidence 467775443 4689999999999999999999999999999999999998888888875 2211 11 12
Q ss_pred ----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHh
Q 037949 118 ----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIII 191 (243)
Q Consensus 118 ----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~l 191 (243)
.++|++++++|....+. ..++.++++|+++.+|... ..++...+.. ++ +.+.... .+ ..+..+++.+
T Consensus 235 ~~~g~g~D~vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~-~~---~~i~g~~-~~-~~~~~~~~~l 307 (352)
T 1e3j_A 235 SAIGDLPNVTIDCSGNEKCIT-IGINITRTGGTLMLVGMGSQMVTVPLVNACA-RE---IDIKSVF-RY-CNDYPIALEM 307 (352)
T ss_dssp HHSSSCCSEEEECSCCHHHHH-HHHHHSCTTCEEEECSCCSSCCCCCHHHHHT-TT---CEEEECC-SC-SSCHHHHHHH
T ss_pred cccCCCCCEEEECCCCHHHHH-HHHHHHhcCCEEEEEecCCCCccccHHHHHh-cC---cEEEEec-cc-hHHHHHHHHH
Confidence 25999999999877665 5799999999999999754 2355544443 23 3333211 12 2334447899
Q ss_pred hhcCCe
Q 037949 192 LAERLL 197 (243)
Q Consensus 192 l~~G~i 197 (243)
+++|++
T Consensus 308 ~~~g~i 313 (352)
T 1e3j_A 308 VASGRC 313 (352)
T ss_dssp HHTTSC
T ss_pred HHcCCC
Confidence 999986
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.7e-11 Score=110.82 Aligned_cols=139 Identities=16% Similarity=0.134 Sum_probs=102.0
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhhhc----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDVVS---- 118 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~~---- 118 (243)
.++++.+.. ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.+...|++ +++ ..+.+.
T Consensus 171 a~~~l~~~~--~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~ 248 (370)
T 4ej6_A 171 CLHGVDLSG--IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVG 248 (370)
T ss_dssp HHHHHHHHT--CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTS
T ss_pred HHHHHHhcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhh
Confidence 456775443 4689999999999999999999999999 899999999998888888875 333 222222
Q ss_pred ----CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHH
Q 037949 119 ----EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGII 190 (243)
Q Consensus 119 ----~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ 190 (243)
++|++++|+|....++ ..++.++++|+++.+|... .+++...+.. ++ +.+.... .+. .+.+++++
T Consensus 249 ~~~gg~Dvvid~~G~~~~~~-~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~-~~---~~i~g~~-~~~-~~~~~~~~ 321 (370)
T 4ej6_A 249 LVPGGVDVVIECAGVAETVK-QSTRLAKAGGTVVILGVLPQGEKVEIEPFDILF-RE---LRVLGSF-INP-FVHRRAAD 321 (370)
T ss_dssp SSTTCEEEEEECSCCHHHHH-HHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHH-TT---CEEEECC-SCT-TCHHHHHH
T ss_pred ccCCCCCEEEECCCCHHHHH-HHHHHhccCCEEEEEeccCCCCccccCHHHHHh-CC---cEEEEec-cCh-HHHHHHHH
Confidence 5899999999887775 5799999999999999753 2455555544 23 3333211 122 22344789
Q ss_pred hhhcCCe
Q 037949 191 ILAERLL 197 (243)
Q Consensus 191 ll~~G~i 197 (243)
++++|++
T Consensus 322 l~~~g~i 328 (370)
T 4ej6_A 322 LVATGAI 328 (370)
T ss_dssp HHHTTCS
T ss_pred HHHcCCC
Confidence 9999987
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-11 Score=110.26 Aligned_cols=140 Identities=18% Similarity=0.171 Sum_probs=102.4
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh----cC
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----SE 119 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----~~ 119 (243)
.|+++.+.. ..+|++|+|+|+|+||+.+++.++.+|++|+++|.++.+++.+.+.|++ +++ ..+.+ .+
T Consensus 155 a~~~l~~~~--~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~ 232 (340)
T 3s2e_A 155 VYKGLKVTD--TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGG 232 (340)
T ss_dssp HHHHHHTTT--CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSS
T ss_pred HHHHHHHcC--CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCC
Confidence 367775542 4689999999999999999999999999999999999999888888875 332 22222 26
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC--CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+|++++++|....++ ..++.++++|+++.+|..... ++...+.. ++ +.+... ..+...+.+++++++++|++
T Consensus 233 ~d~vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~-~~---~~i~g~-~~~~~~~~~~~~~l~~~g~l 306 (340)
T 3s2e_A 233 AHGVLVTAVSPKAFS-QAIGMVRRGGTIALNGLPPGDFGTPIFDVVL-KG---ITIRGS-IVGTRSDLQESLDFAAHGDV 306 (340)
T ss_dssp EEEEEESSCCHHHHH-HHHHHEEEEEEEEECSCCSSEEEEEHHHHHH-TT---CEEEEC-CSCCHHHHHHHHHHHHTTSC
T ss_pred CCEEEEeCCCHHHHH-HHHHHhccCCEEEEeCCCCCCCCCCHHHHHh-CC---eEEEEE-ecCCHHHHHHHHHHHHhCCC
Confidence 899999999888776 579999999999999976533 34334433 23 333321 12223334447899999987
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=99.25 E-value=5.2e-12 Score=113.07 Aligned_cols=145 Identities=19% Similarity=0.163 Sum_probs=100.7
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----Hhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----EDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~~~----- 117 (243)
.|+++.+.. ..+|++|+|+|+|+||+.+++.++..|+ +|+++|.++.+++.+.+.|++ +++. .+.+
T Consensus 155 a~~al~~~~--~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~ 232 (352)
T 3fpc_A 155 GFHGAELAN--IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATD 232 (352)
T ss_dssp HHHHHHHTT--CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTT
T ss_pred HHHHHHhcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcC
Confidence 467775443 4689999999999999999999999999 899999999998888888985 3332 2211
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhc
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAE 194 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~ 194 (243)
.++|++++|+|.+..++ +.++.++++|+++.+|... ..++.+.+......++..+..........+.+++++++++
T Consensus 233 g~g~D~v~d~~g~~~~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~ 311 (352)
T 3fpc_A 233 GKGVDKVVIAGGDVHTFA-QAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFY 311 (352)
T ss_dssp TCCEEEEEECSSCTTHHH-HHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCChHHHH-HHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHc
Confidence 26999999999977775 5799999999999999764 2233332211001133444332111111223447899999
Q ss_pred CCe
Q 037949 195 RLL 197 (243)
Q Consensus 195 G~i 197 (243)
|++
T Consensus 312 g~i 314 (352)
T 3fpc_A 312 KRV 314 (352)
T ss_dssp TSC
T ss_pred CCC
Confidence 988
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2.9e-11 Score=108.24 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=81.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
.+.|++++|+|+|.||..+|+.++++|++|+++|+++.+. .|+. ..++++.++++|+|+.|+. +.++++.
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~-----~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~ 235 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPN-----TNYTYYGSVVELASNSDILVVACPLTPETTHIINR 235 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTT-----CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCH
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhc-----cCceecCCHHHHHhcCCEEEEecCCChHHHHHhhH
Confidence 5789999999999999999999999999999999987643 2544 3467888899999999864 3467876
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.|+++++++|++++. .+|.+++..
T Consensus 236 ~~l~~mk~gailIn~srG~-~vd~~aL~~ 263 (333)
T 3ba1_A 236 EVIDALGPKGVLINIGRGP-HVDEPELVS 263 (333)
T ss_dssp HHHHHHCTTCEEEECSCGG-GBCHHHHHH
T ss_pred HHHhcCCCCCEEEECCCCc-hhCHHHHHH
Confidence 7899999999999999986 477777754
|
| >1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=2.5e-11 Score=107.31 Aligned_cols=97 Identities=22% Similarity=0.268 Sum_probs=80.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-cccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-PVLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
.+.|++++|+|+|.||+.+|+.++++|++|+++|+++. . . +. ...++++.++.+|+|+.|+. +.++++.
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~-~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~ 194 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-E-G----PWRFTNSLEEALREARAAVCALPLNKHTRGLVKY 194 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-C-S----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-c-c----CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCH
Confidence 57899999999999999999999999999999998875 1 1 33 24467888899999999863 4567887
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.||++++++|+|+++ .+|.+++..
T Consensus 195 ~~l~~mk~gailin~srg~-~vd~~aL~~ 222 (303)
T 1qp8_A 195 QHLALMAEDAVFVNVGRAE-VLDRDGVLR 222 (303)
T ss_dssp HHHTTSCTTCEEEECSCGG-GBCHHHHHH
T ss_pred HHHhhCCCCCEEEECCCCc-ccCHHHHHH
Confidence 7899999999999999975 477776654
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.8e-11 Score=107.11 Aligned_cols=140 Identities=23% Similarity=0.202 Sum_probs=100.5
Q ss_pred chhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCccc-------CHHh---hh
Q 037949 49 SLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIPVL-------TRED---VV 117 (243)
Q Consensus 49 ~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~~~-------~~~~---~~ 117 (243)
..|+++.+.. ..+|++|+|+|+|+||+.+++.++.+|++ |+++|.++.+++.+++.+..+. +.++ .+
T Consensus 167 ta~~~l~~~~--~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v 244 (363)
T 3m6i_A 167 VALAGLQRAG--VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKI 244 (363)
T ss_dssp HHHHHHHHHT--CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHH
T ss_pred HHHHHHHHcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHH
Confidence 3567775543 46899999999999999999999999997 9999999999887777632221 1111 11
Q ss_pred ------cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhH
Q 037949 118 ------SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGI 189 (243)
Q Consensus 118 ------~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai 189 (243)
.++|++++|+|.+..++ ..++.++++|+++.+|... ..++...+.. +++ .+.... .+ ..+..+++
T Consensus 245 ~~~t~g~g~Dvvid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~-~~~---~i~g~~-~~-~~~~~~~~ 317 (363)
T 3m6i_A 245 VESFGGIEPAVALECTGVESSIA-AAIWAVKFGGKVFVIGVGKNEIQIPFMRASV-REV---DLQFQY-RY-CNTWPRAI 317 (363)
T ss_dssp HHHTSSCCCSEEEECSCCHHHHH-HHHHHSCTTCEEEECCCCCSCCCCCHHHHHH-HTC---EEEECC-SC-SSCHHHHH
T ss_pred HHHhCCCCCCEEEECCCChHHHH-HHHHHhcCCCEEEEEccCCCCccccHHHHHh-cCc---EEEEcc-CC-HHHHHHHH
Confidence 26999999999987775 5799999999999999765 3355555544 233 333211 22 33444478
Q ss_pred HhhhcCCe
Q 037949 190 IILAERLL 197 (243)
Q Consensus 190 ~ll~~G~i 197 (243)
+++++|++
T Consensus 318 ~l~~~g~i 325 (363)
T 3m6i_A 318 RLVENGLV 325 (363)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCCC
Confidence 99999987
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.3e-11 Score=110.93 Aligned_cols=139 Identities=17% Similarity=0.077 Sum_probs=98.5
Q ss_pred hhhhhhhhccccc-cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCc-ccCH---H---hhhcCC
Q 037949 50 LPDGLMRATDITI-AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIP-VLTR---E---DVVSEA 120 (243)
Q Consensus 50 ~~~av~~~~~~~l-~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~-~~~~---~---~~~~~a 120 (243)
.|+++.+. . .. +|++|+|+|+|+||+.+++.++.+|++|++++.++.+++.+. ..|++ +++. + +...++
T Consensus 168 a~~~l~~~-~-~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~ 245 (357)
T 2cf5_A 168 VYSPLSHF-G-LKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSL 245 (357)
T ss_dssp HHHHHHHT-S-TTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTE
T ss_pred HHHHHHhc-C-CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCC
Confidence 35666554 2 34 899999999999999999999999999999999998887777 77875 3321 1 122468
Q ss_pred cEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC---CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE---IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~---id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
|++++|+|.+..+. ..++.++++|+++.+|....+ ++.. +.. ++ ..+.. +..+...+..++++++++|++
T Consensus 246 D~vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~-~~---~~i~g-~~~~~~~~~~~~~~l~~~g~l 318 (357)
T 2cf5_A 246 DYVIDTVPVHHALE-PYLSLLKLDGKLILMGVINNPLQFLTPL-LML-GR---KVITG-SFIGSMKETEEMLEFCKEKGL 318 (357)
T ss_dssp EEEEECCCSCCCSH-HHHTTEEEEEEEEECSCCSSCCCCCHHH-HHH-HT---CEEEE-CCSCCHHHHHHHHHHHHHTTC
T ss_pred CEEEECCCChHHHH-HHHHHhccCCEEEEeCCCCCCccccCHH-HHh-Cc---cEEEE-EccCCHHHHHHHHHHHHcCCC
Confidence 99999999877675 579999999999999976432 3333 333 23 33332 111222233447899999987
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=99.24 E-value=9.1e-12 Score=111.92 Aligned_cols=140 Identities=16% Similarity=0.103 Sum_probs=99.9
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH------Hhhh-cCCc
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR------EDVV-SEAG 121 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~------~~~~-~~aD 121 (243)
.|+++.+. + ..+|++|+|+|+|+||+.+++.++.+|++|+++++++.+++.+...|++ +++. .+.+ .++|
T Consensus 168 a~~~l~~~-~-~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D 245 (360)
T 1piw_A 168 VYSPLVRN-G-CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFD 245 (360)
T ss_dssp HHHHHHHT-T-CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEE
T ss_pred HHHHHHHc-C-CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCC
Confidence 36777654 2 4589999999999999999999999999999999999988888888875 3322 1222 3789
Q ss_pred EEEEccCC--hhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 122 LFVTTTEN--ADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 122 vvi~a~G~--~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
++++++|. +..+. ..++.++++|+++.+|.... .++...+.. +++.+.... .+...+..+++.++++|++
T Consensus 246 ~vid~~g~~~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~----~~~~i~g~~-~~~~~~~~~~~~l~~~g~l 319 (360)
T 1piw_A 246 LIVVCASSLTDIDFN-IMPKAMKVGGRIVSISIPEQHEMLSLKPYGL----KAVSISYSA-LGSIKELNQLLKLVSEKDI 319 (360)
T ss_dssp EEEECCSCSTTCCTT-TGGGGEEEEEEEEECCCCCSSCCEEECGGGC----BSCEEEECC-CCCHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCcHHHHH-HHHHHhcCCCEEEEecCCCCccccCHHHHHh----CCeEEEEEe-cCCHHHHHHHHHHHHhCCC
Confidence 99999998 66675 47999999999999997643 233323222 223333211 1222233447899999987
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1.7e-11 Score=109.30 Aligned_cols=140 Identities=17% Similarity=0.132 Sum_probs=100.9
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh----cC
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----SE 119 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----~~ 119 (243)
.|+++.+. + ..+|++|+|+|+|+||+.+++.++..|++|+++++++.+++.+...|++ +++ ..+.+ .+
T Consensus 153 a~~~l~~~-~-~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~ 230 (339)
T 1rjw_A 153 TYKALKVT-G-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGG 230 (339)
T ss_dssp HHHHHHHH-T-CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSS
T ss_pred HHHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCC
Confidence 46777655 2 4689999999999999999999999999999999999998888888875 332 11211 47
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC--CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+|++++++|.+..+. ..++.++++|+++.+|....+ ++...+.. ++ ..+... ..+...+..++++++++|++
T Consensus 231 ~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~---~~i~g~-~~~~~~~~~~~~~l~~~g~l 304 (339)
T 1rjw_A 231 VHAAVVTAVSKPAFQ-SAYNSIRRGGACVLVGLPPEEMPIPIFDTVL-NG---IKIIGS-IVGTRKDLQEALQFAAEGKV 304 (339)
T ss_dssp EEEEEESSCCHHHHH-HHHHHEEEEEEEEECCCCSSEEEEEHHHHHH-TT---CEEEEC-CSCCHHHHHHHHHHHHTTSC
T ss_pred CCEEEECCCCHHHHH-HHHHHhhcCCEEEEecccCCCCccCHHHHHh-CC---cEEEEe-ccCCHHHHHHHHHHHHcCCC
Confidence 899999999877665 578999999999999976533 34434433 23 333321 11222333447899999987
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.5e-11 Score=108.62 Aligned_cols=92 Identities=21% Similarity=0.266 Sum_probs=77.7
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC--------------------------HHh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT--------------------------RED 115 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~--------------------------~~~ 115 (243)
+++++|+|+|+|.||+.+++.++.+|++|+++|+++.+++.+...|.+..+ +.+
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 478999999999999999999999999999999999988777777764321 345
Q ss_pred hhcCCcEEEEccC-----ChhcccHHHHccCCCCeEEEEecCC
Q 037949 116 VVSEAGLFVTTTE-----NADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 116 ~~~~aDvvi~a~G-----~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++++|+||.++. .+.+++.+.++.||+|+++++++..
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d 304 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGE 304 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCC
Confidence 6789999999853 2356888999999999999999864
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=8.6e-11 Score=105.92 Aligned_cols=140 Identities=17% Similarity=0.201 Sum_probs=98.6
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh----
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV---- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~---- 117 (243)
|+++.+... ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.+++.|++ +++. .+.+
T Consensus 180 ~~~l~~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t 258 (373)
T 1p0f_A 180 YGAAVNTAK-VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKT 258 (373)
T ss_dssp HHHHHTTTC-CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHT
T ss_pred HHHHHhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHh
Confidence 445433222 4589999999999999999999999999 899999999998888888875 3332 1222
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCC-eEEEEecCCCC----CCChhHHHHhhcCeEEEeecCe-eeeEccCchhhHH
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNA-AIVCNIGHFDN----EIDMLDLEAYRGIKRITIKPQT-DPWVFPQTRRGII 190 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g-~~vvnvg~~~~----~id~~~l~~~~~~~~~~i~~~~-~~~~~~~~~~ai~ 190 (243)
.++|++++|+|....+. ..++.++++ |+++.+|.... .++...+.. ++ .+.... ..+...+.+++++
T Consensus 259 ~gg~Dvvid~~g~~~~~~-~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~----~~-~i~g~~~~~~~~~~~~~~~~ 332 (373)
T 1p0f_A 259 NGGVDYAVECAGRIETMM-NALQSTYCGSGVTVVLGLASPNERLPLDPLLLLT----GR-SLKGSVFGGFKGEEVSRLVD 332 (373)
T ss_dssp TSCBSEEEECSCCHHHHH-HHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHT----TC-EEEECSGGGCCGGGHHHHHH
T ss_pred CCCCCEEEECCCCHHHHH-HHHHHHhcCCCEEEEEccCCCCCccccCHHHhcc----Cc-eEEeeccCCcCHHHHHHHHH
Confidence 26899999999877775 579999999 99999997541 234433333 22 333221 1111123444789
Q ss_pred hhhcCCe
Q 037949 191 ILAERLL 197 (243)
Q Consensus 191 ll~~G~i 197 (243)
++++|++
T Consensus 333 l~~~g~i 339 (373)
T 1p0f_A 333 DYMKKKI 339 (373)
T ss_dssp HHHTTSS
T ss_pred HHHcCCC
Confidence 9999987
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.20 E-value=5.7e-11 Score=108.73 Aligned_cols=91 Identities=16% Similarity=0.261 Sum_probs=76.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc------------------------------
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL------------------------------ 111 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~------------------------------ 111 (243)
+++.+|+|+|+|+||+.+++.++.+|++|+++|+++.+++.+...|.+..
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 57899999999999999999999999999999999998877777775421
Q ss_pred CHHhhhcCCcEEEEccC-----ChhcccHHHHccCCCCeEEEEecC
Q 037949 112 TREDVVSEAGLFVTTTE-----NADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 112 ~~~~~~~~aDvvi~a~G-----~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
++.+.++++|+||.|.. .+.+++.+.++.||+|+++++++.
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 23455689999999853 345788899999999999999985
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=5.8e-11 Score=107.88 Aligned_cols=92 Identities=20% Similarity=0.173 Sum_probs=75.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcc-------cCHHhhhcCCcEEEEccCCh--
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPV-------LTREDVVSEAGLFVTTTENA-- 130 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~-------~~~~~~~~~aDvvi~a~G~~-- 130 (243)
.++|++|+|+|+|+||+.+++.++.+|++|+++|+++.+++.+.. .|..+ .++.+.+.++|+|++|++.+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~ 244 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA 244 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 368999999999999999999999999999999999988766554 45532 12445667899999998654
Q ss_pred ---hcccHHHHccCCCCeEEEEecC
Q 037949 131 ---DIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 131 ---~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.++..+.++.|+++++++|+|.
T Consensus 245 ~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 245 KAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp CCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred CCcceecHHHHhcCCCCcEEEEEec
Confidence 3456778999999999999994
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=7.9e-11 Score=106.29 Aligned_cols=140 Identities=16% Similarity=0.170 Sum_probs=98.3
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCHH-------hhh----
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTRE-------DVV---- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~~-------~~~---- 117 (243)
|+++.+... ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.+...|++ +++.. +.+
T Consensus 184 ~~~l~~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~ 262 (376)
T 1e3i_A 184 YGAAINTAK-VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELT 262 (376)
T ss_dssp HHHHHTTSC-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHH
T ss_pred HHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHh
Confidence 455433222 4589999999999999999999999999 899999999998888888875 33322 222
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCC-eEEEEecCCCCC--CChhHHHHhhcCeEEEeecCee-ee-EccCchhhHHh
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNA-AIVCNIGHFDNE--IDMLDLEAYRGIKRITIKPQTD-PW-VFPQTRRGIII 191 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g-~~vvnvg~~~~~--id~~~l~~~~~~~~~~i~~~~~-~~-~~~~~~~ai~l 191 (243)
.++|++++|+|....+. +.++.++++ |+++.+|..... ++...+.. ++ .+..... .+ ...+..+++++
T Consensus 263 ~~g~Dvvid~~G~~~~~~-~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~----~~-~i~g~~~~~~~~~~~~~~~~~l 336 (376)
T 1e3i_A 263 AGGVDYSLDCAGTAQTLK-AAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL----GR-SINGTFFGGWKSVDSVPNLVSD 336 (376)
T ss_dssp TSCBSEEEESSCCHHHHH-HHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT----TC-EEEECSGGGCCHHHHHHHHHHH
T ss_pred CCCccEEEECCCCHHHHH-HHHHHhhcCCCEEEEECCCCCccccCHHHhhc----cC-eEEEEecCCCCcHHHHHHHHHH
Confidence 26899999999877775 579999999 999999975322 34333433 22 3332111 11 11223337789
Q ss_pred hhcCCe
Q 037949 192 LAERLL 197 (243)
Q Consensus 192 l~~G~i 197 (243)
+++|++
T Consensus 337 ~~~g~i 342 (376)
T 1e3i_A 337 YKNKKF 342 (376)
T ss_dssp HHTTSS
T ss_pred HHcCCC
Confidence 999987
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.19 E-value=2e-11 Score=111.17 Aligned_cols=141 Identities=16% Similarity=0.102 Sum_probs=98.5
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcccCH------Hhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVLTR------EDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~~~------~~~~----- 117 (243)
.|+++.++ . ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|+++.+++.+...|+++++. .+.+
T Consensus 174 a~~al~~~-~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~ 251 (398)
T 2dph_A 174 GFHGCVSA-G-VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILG 251 (398)
T ss_dssp HHHHHHHT-T-CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHS
T ss_pred HHHHHHHc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhC
Confidence 46777543 2 4689999999999999999999999999 9999999999988888888764321 2222
Q ss_pred -cCCcEEEEccCChh--------------cccHHHHccCCCCeEEEEecCCC-------------C--CCChhHHHHhhc
Q 037949 118 -SEAGLFVTTTENAD--------------IIMVRHMKQMKNAAIVCNIGHFD-------------N--EIDMLDLEAYRG 167 (243)
Q Consensus 118 -~~aDvvi~a~G~~~--------------~i~~~~l~~l~~g~~vvnvg~~~-------------~--~id~~~l~~~~~ 167 (243)
.++|++|+|+|... .+. +.++.++++|+++.+|... . .++...+.. ++
T Consensus 252 g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~-~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-k~ 329 (398)
T 2dph_A 252 KPEVDCGVDAVGFEAHGLGDEANTETPNGALN-SLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWT-KS 329 (398)
T ss_dssp SSCEEEEEECSCTTCBCSGGGTTSBCTTHHHH-HHHHHEEEEEEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHH-TT
T ss_pred CCCCCEEEECCCCccccccccccccccHHHHH-HHHHHHhcCCEEEEeccccccccccccccccCCcccccHHHHhh-cC
Confidence 16899999998753 454 5789999999999998751 1 233333333 22
Q ss_pred CeEEEeecCeeeeEccCchhhHHhhhcCCee
Q 037949 168 IKRITIKPQTDPWVFPQTRRGIIILAERLLM 198 (243)
Q Consensus 168 ~~~~~i~~~~~~~~~~~~~~ai~ll~~G~iv 198 (243)
+.+... ..+...+.+++++++++|++-
T Consensus 330 ---~~i~g~-~~~~~~~~~~~~~l~~~g~l~ 356 (398)
T 2dph_A 330 ---IRIMTG-MAPVTNYNRHLTEAILWDQMP 356 (398)
T ss_dssp ---CEEECS-SCCGGGTHHHHHHHHHTTCCH
T ss_pred ---CEEEEe-ccCcHHHHHHHHHHHHcCCCC
Confidence 333321 112222334478999999883
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.5e-11 Score=108.42 Aligned_cols=139 Identities=20% Similarity=0.170 Sum_probs=98.8
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.++++.+. . . +|++|+|+|+|+||+.+++.++.+|+ +|+++++++.+++.+.+.|++ +++ ..+.+
T Consensus 157 a~~~l~~~-~-~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 157 AVDTVLAG-P-I-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITD 233 (348)
T ss_dssp HHHHHTTS-C-C-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTT
T ss_pred HHHHHHhc-C-C-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcC
Confidence 46777543 3 4 89999999999999999999999999 999999999988888888875 333 22222
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCC--CCCh-hHHHHhhcCeEEEeecCeeeeE-ccCchhhHHhh
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDM-LDLEAYRGIKRITIKPQTDPWV-FPQTRRGIIIL 192 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~-~~l~~~~~~~~~~i~~~~~~~~-~~~~~~ai~ll 192 (243)
.++|++++++|.+..+. +.++.++++|+++.+|.... .++. ..+.. ++ +.+.... .+. ..+..++++++
T Consensus 234 g~g~D~vid~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~-~~---~~i~g~~-~~~~~~~~~~~~~l~ 307 (348)
T 2d8a_A 234 GNGVDVFLEFSGAPKALE-QGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIF-KA---LTIYGIT-GRHLWETWYTVSRLL 307 (348)
T ss_dssp TSCEEEEEECSCCHHHHH-HHHHHEEEEEEEEECCCCSSCCCCCHHHHTTT-TT---CEEEECC-CCCSHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCHHHHH-HHHHHHhcCCEEEEEccCCCCcccCchHHHHh-CC---cEEEEec-CCCcHHHHHHHHHHH
Confidence 26899999999877665 57899999999999997643 3444 33322 22 3333211 111 22233378999
Q ss_pred hcCCe
Q 037949 193 AERLL 197 (243)
Q Consensus 193 ~~G~i 197 (243)
++|++
T Consensus 308 ~~g~i 312 (348)
T 2d8a_A 308 QSGKL 312 (348)
T ss_dssp HHTCC
T ss_pred HcCCC
Confidence 99986
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=99.17 E-value=4.7e-11 Score=107.42 Aligned_cols=140 Identities=16% Similarity=0.012 Sum_probs=99.0
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh------
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV------ 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~------ 117 (243)
.|+++.+... ..+|++|+|+|+|+||+.+++.++.+|++|++++.++.+++.+.+.|++ +++ ..+.+
T Consensus 177 a~~al~~~~~-~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g 255 (363)
T 3uog_A 177 AWFALVEKGH-LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGD 255 (363)
T ss_dssp HHHHHTTTTC-CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTT
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCC
Confidence 4566643223 4689999999999999999999999999999999999998888888875 332 22211
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhc
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAE 194 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~ 194 (243)
.++|++++|+|. ..+. ..++.++++|+++.+|... ..++...+.. ++ ..+.. +..+...+..+++.++++
T Consensus 256 ~g~D~vid~~g~-~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~-~~---~~i~g-~~~~~~~~~~~~~~l~~~ 328 (363)
T 3uog_A 256 RGADHILEIAGG-AGLG-QSLKAVAPDGRISVIGVLEGFEVSGPVGPLLL-KS---PVVQG-ISVGHRRALEDLVGAVDR 328 (363)
T ss_dssp CCEEEEEEETTS-SCHH-HHHHHEEEEEEEEEECCCSSCEECCBTTHHHH-TC---CEEEE-CCCCCHHHHHHHHHHHHH
T ss_pred CCceEEEECCCh-HHHH-HHHHHhhcCCEEEEEecCCCcccCcCHHHHHh-CC---cEEEE-EecCCHHHHHHHHHHHHc
Confidence 269999999994 4554 5799999999999999764 2455555544 23 33332 111222333437788888
Q ss_pred CCe
Q 037949 195 RLL 197 (243)
Q Consensus 195 G~i 197 (243)
|++
T Consensus 329 g~l 331 (363)
T 3uog_A 329 LGL 331 (363)
T ss_dssp HTC
T ss_pred CCC
Confidence 875
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.17 E-value=6.8e-11 Score=107.48 Aligned_cols=101 Identities=19% Similarity=0.217 Sum_probs=81.1
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcccC------HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVLT------REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~~------~~~~~----- 117 (243)
.|+++.+. . ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.++..|+++++ +.+.+
T Consensus 174 a~~al~~~-~-~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~ 251 (398)
T 1kol_A 174 GYHGAVTA-G-VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLG 251 (398)
T ss_dssp HHHHHHHT-T-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHS
T ss_pred HHHHHHHc-C-CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhC
Confidence 46777643 2 4689999999999999999999999999 799999999998888888986432 22222
Q ss_pred -cCCcEEEEccCChh---------------cccHHHHccCCCCeEEEEecCC
Q 037949 118 -SEAGLFVTTTENAD---------------IIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 -~~aDvvi~a~G~~~---------------~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|... .+. +.++.++++|+++.+|..
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~G~iv~~G~~ 302 (398)
T 1kol_A 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLN-SLMQVTRVAGKIGIPGLY 302 (398)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHH-HHHHHEEEEEEEEECSCC
T ss_pred CCCCCEEEECCCCcccccccccccccchHHHHH-HHHHHHhcCCEEEEeccc
Confidence 25899999998753 454 578999999999999865
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=99.15 E-value=2.2e-10 Score=103.28 Aligned_cols=140 Identities=16% Similarity=0.192 Sum_probs=97.9
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCHH-------hhh----
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTRE-------DVV---- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~~-------~~~---- 117 (243)
|+++.+... ..+|++|+|+|+|+||+.+++.++.+|+ +|++++.++.+++.+...|++ +++.. +.+
T Consensus 180 ~~~l~~~~~-~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~ 258 (374)
T 2jhf_A 180 YGSAVKVAK-VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMS 258 (374)
T ss_dssp HHHHHTTTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHT
T ss_pred HHHHHhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHh
Confidence 445433222 4589999999999999999999999999 899999999998888888875 33321 222
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCC-eEEEEecCCCC----CCChhHHHHhhcCeEEEeecCee-eeE-ccCchhhH
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNA-AIVCNIGHFDN----EIDMLDLEAYRGIKRITIKPQTD-PWV-FPQTRRGI 189 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g-~~vvnvg~~~~----~id~~~l~~~~~~~~~~i~~~~~-~~~-~~~~~~ai 189 (243)
.++|++++++|....+. ..++.++++ |+++.+|.... +++...+.. ++ .+..... .+. ..+..+++
T Consensus 259 ~~g~D~vid~~g~~~~~~-~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~----~~-~i~g~~~~~~~~~~~~~~~~ 332 (374)
T 2jhf_A 259 NGGVDFSFEVIGRLDTMV-TALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLS----GR-TWKGAIFGGFKSKDSVPKLV 332 (374)
T ss_dssp TSCBSEEEECSCCHHHHH-HHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHT----TC-EEEECSGGGCCHHHHHHHHH
T ss_pred CCCCcEEEECCCCHHHHH-HHHHHhhcCCcEEEEeccCCCCCccccCHHHHhc----CC-eEEEeccCCCChHHHHHHHH
Confidence 25899999999877775 579999999 99999997542 244444433 22 3332111 111 12233377
Q ss_pred HhhhcCCe
Q 037949 190 IILAERLL 197 (243)
Q Consensus 190 ~ll~~G~i 197 (243)
+++++|++
T Consensus 333 ~l~~~g~i 340 (374)
T 2jhf_A 333 ADFMAKKF 340 (374)
T ss_dssp HHHHTTSS
T ss_pred HHHHcCCC
Confidence 89999987
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=9.4e-11 Score=105.59 Aligned_cols=142 Identities=16% Similarity=0.136 Sum_probs=99.3
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.++++.+... ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.+...|++ +++ ..+.+
T Consensus 178 a~~al~~~~~-~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~ 256 (371)
T 1f8f_A 178 GAGACINALK-VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITD 256 (371)
T ss_dssp HHHHHHTTTC-CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred HHHHHHhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcC
Confidence 3566633222 4589999999999999999999999999 799999999998888888875 322 22222
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeee-e-EccCchhhHHh
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDP-W-VFPQTRRGIII 191 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~-~-~~~~~~~ai~l 191 (243)
.++|++++++|.+..+. +.++.++++|+++.+|... ..++...+.. +++ .+...... + ...+..+++++
T Consensus 257 gg~D~vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~-~~~---~i~g~~~~~~~~~~~~~~~~~l 331 (371)
T 1f8f_A 257 GGVNFALESTGSPEILK-QGVDALGILGKIAVVGAPQLGTTAQFDVNDLLL-GGK---TILGVVEGSGSPKKFIPELVRL 331 (371)
T ss_dssp SCEEEEEECSCCHHHHH-HHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHH-TTC---EEEECSGGGSCHHHHHHHHHHH
T ss_pred CCCcEEEECCCCHHHHH-HHHHHHhcCCEEEEeCCCCCCCccccCHHHHHh-CCC---EEEEeCCCCCchHHHHHHHHHH
Confidence 15899999999877675 5799999999999999753 2355555443 232 33321110 1 11223337789
Q ss_pred hhcCCe
Q 037949 192 LAERLL 197 (243)
Q Consensus 192 l~~G~i 197 (243)
+++|++
T Consensus 332 ~~~g~l 337 (371)
T 1f8f_A 332 YQQGKF 337 (371)
T ss_dssp HHTTSC
T ss_pred HHcCCC
Confidence 999987
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=9.5e-11 Score=105.28 Aligned_cols=139 Identities=9% Similarity=0.044 Sum_probs=98.4
Q ss_pred hhhhhhhh-ccccccCcEEEEEcCChHHHHHHHHHHhC-CCEEEEEeCCchhHHHHhhcCCc-ccCH----Hhh----h-
Q 037949 50 LPDGLMRA-TDITIAGKIAVDCGHGDVGRGCAAALKAV-GARVMGTEIDLICALQALTEGIP-VLTR----EDV----V- 117 (243)
Q Consensus 50 ~~~av~~~-~~~~l~g~~vlViG~G~IG~~~A~~l~~~-Ga~V~v~d~~~~r~~~a~~~G~~-~~~~----~~~----~- 117 (243)
.++++.+. .+ ..+|++|+|+|+|+||+.+++.++.+ |++|+++|.++.+++.+.+.|++ +++. .+. .
T Consensus 173 a~~al~~~~~~-~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~~~~ 251 (359)
T 1h2b_A 173 AYRAVKKAART-LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTR 251 (359)
T ss_dssp HHHHHHHHHTT-CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTT
T ss_pred HHHHHHhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccchHHHHHHHHhC
Confidence 46777652 22 45899999999999999999999999 99999999999998888888975 3321 121 1
Q ss_pred -cCCcEEEEccCChh--cccHHHHccCCCCeEEEEecCCCC-CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh
Q 037949 118 -SEAGLFVTTTENAD--IIMVRHMKQMKNAAIVCNIGHFDN-EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA 193 (243)
Q Consensus 118 -~~aDvvi~a~G~~~--~i~~~~l~~l~~g~~vvnvg~~~~-~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~ 193 (243)
.++|++++++|.+. .++ ..++. ++|+++.+|.... .++...+.. ++ ..+.... .+...+..+++++++
T Consensus 252 g~g~Dvvid~~G~~~~~~~~-~~~~~--~~G~~v~~g~~~~~~~~~~~~~~-~~---~~i~g~~-~~~~~~~~~~~~l~~ 323 (359)
T 1h2b_A 252 GRGVNVAMDFVGSQATVDYT-PYLLG--RMGRLIIVGYGGELRFPTIRVIS-SE---VSFEGSL-VGNYVELHELVTLAL 323 (359)
T ss_dssp TCCEEEEEESSCCHHHHHHG-GGGEE--EEEEEEECCCSSCCCCCHHHHHH-TT---CEEEECC-SCCHHHHHHHHHHHH
T ss_pred CCCCcEEEECCCCchHHHHH-HHhhc--CCCEEEEEeCCCCCCCCHHHHHh-CC---cEEEEec-CCCHHHHHHHHHHHH
Confidence 16899999999886 665 46776 8999999987542 455554443 23 3333211 122223344789999
Q ss_pred cCCe
Q 037949 194 ERLL 197 (243)
Q Consensus 194 ~G~i 197 (243)
+|++
T Consensus 324 ~g~l 327 (359)
T 1h2b_A 324 QGKV 327 (359)
T ss_dssp TTSC
T ss_pred cCCC
Confidence 9986
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.5e-10 Score=102.98 Aligned_cols=140 Identities=12% Similarity=0.051 Sum_probs=102.1
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhC-CCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAV-GARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~-Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|++++++. ..+|++|+|+|+|++|..+++.++.. |++|+++|.+++|+..+...|++ +++ ..+.+
T Consensus 152 a~~~l~~~~--~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~ 229 (348)
T 4eez_A 152 TYKAIKVSG--VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITG 229 (348)
T ss_dssp HHHHHHHHT--CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTT
T ss_pred EEeeecccC--CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcC
Confidence 356665543 46899999999999999999999865 67999999999998888888875 322 22221
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhc
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAE 194 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~ 194 (243)
.++|++++++|....+. ..++.++++|+++.+|... ..++...+.. +++.+.. +..+...+..++++++++
T Consensus 230 g~g~d~~~~~~~~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~i~g-s~~~~~~~~~~~~~l~~~ 303 (348)
T 4eez_A 230 GLGVQSAIVCAVARIAFE-QAVASLKPMGKMVAVAVPNTEMTLSVPTVVF----DGVEVAG-SLVGTRLDLAEAFQFGAE 303 (348)
T ss_dssp SSCEEEEEECCSCHHHHH-HHHHTEEEEEEEEECCCCSCEEEECHHHHHH----SCCEEEE-CCSCCHHHHHHHHHHHHT
T ss_pred CCCceEEEEeccCcchhh-eeheeecCCceEEEEeccCCCCccCHHHHHh----CCeEEEE-EecCCHHHHHHHHHHHHc
Confidence 26789999999988886 5799999999999999765 3466666654 2333432 222233344447899999
Q ss_pred CCe
Q 037949 195 RLL 197 (243)
Q Consensus 195 G~i 197 (243)
|++
T Consensus 304 g~i 306 (348)
T 4eez_A 304 GKV 306 (348)
T ss_dssp TSC
T ss_pred CCC
Confidence 997
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-10 Score=105.57 Aligned_cols=142 Identities=16% Similarity=0.172 Sum_probs=97.9
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCHH-------hhh----
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTRE-------DVV---- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~~-------~~~---- 117 (243)
|+++.+... ..+|++|+|+|+|+||+.+++.++..|+ +|+++|+++.+++.+.+.|++ +++.. +.+
T Consensus 182 ~~al~~~~~-~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~ 260 (378)
T 3uko_A 182 LGAVWNTAK-VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLT 260 (378)
T ss_dssp HHHHHTTTC-CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHT
T ss_pred HHHHHhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhc
Confidence 455533222 4689999999999999999999999999 899999999999888888985 33322 212
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCC-eEEEEecCCC--CCCChhHHHHhhcCeEEEeecCee-ee-EccCchhhHHh
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNA-AIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTD-PW-VFPQTRRGIII 191 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g-~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~-~~-~~~~~~~ai~l 191 (243)
.++|++++|+|.+..+. ..++.++++ |+++.+|... ..++.+......+ +.+..... .+ ...+..+++++
T Consensus 261 ~gg~D~vid~~g~~~~~~-~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~---~~i~g~~~~~~~~~~~~~~~~~l 336 (378)
T 3uko_A 261 DGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAASGQEISTRPFQLVTG---RVWKGTAFGGFKSRTQVPWLVEK 336 (378)
T ss_dssp TSCBSEEEECSCCHHHHH-HHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTT---CEEEECSGGGCCHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCHHHHH-HHHHHhhccCCEEEEEcccCCCCccccCHHHHhcC---cEEEEEEecCCCchHHHHHHHHH
Confidence 26999999999987775 579999996 9999999753 2233322222112 22322111 11 11223337789
Q ss_pred hhcCCe
Q 037949 192 LAERLL 197 (243)
Q Consensus 192 l~~G~i 197 (243)
+++|++
T Consensus 337 ~~~g~l 342 (378)
T 3uko_A 337 YMNKEI 342 (378)
T ss_dssp HHTTSS
T ss_pred HHcCCC
Confidence 999987
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.13 E-value=2.8e-10 Score=102.56 Aligned_cols=131 Identities=15% Similarity=0.172 Sum_probs=94.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.+.+.|++ +++. .+.+ .++|+++++
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 269 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEEC
Confidence 4589999999999999999999999999 899999999998888888875 3332 2222 258999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCCCC-C--CChhHHHHhhcCeEEEeecCee-ee-EccCchhhHHhhhcCCe
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHFDN-E--IDMLDLEAYRGIKRITIKPQTD-PW-VFPQTRRGIIILAERLL 197 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~~~-~--id~~~l~~~~~~~~~~i~~~~~-~~-~~~~~~~ai~ll~~G~i 197 (243)
+|....+. ..++.++++ |+++.+|.... . ++...+.. ++ .+..... .+ ...+..++++++++|++
T Consensus 270 ~g~~~~~~-~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~----~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l 340 (374)
T 1cdo_A 270 VGNVGVMR-NALESCLKGWGVSVLVGWTDLHDVATRPIQLIA----GR-TWKGSMFGGFKGKDGVPKMVKAYLDKKV 340 (374)
T ss_dssp SCCHHHHH-HHHHTBCTTTCEEEECSCCSSSCEEECHHHHHT----TC-EEEECSGGGCCHHHHHHHHHHHHHTTSS
T ss_pred CCCHHHHH-HHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhc----CC-eEEEEecCCCCcHHHHHHHHHHHHcCCC
Confidence 99877775 579999999 99999997642 2 34433333 22 3332111 11 11223337789999987
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=2e-10 Score=103.38 Aligned_cols=140 Identities=15% Similarity=0.215 Sum_probs=97.7
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCHH-------hhh----
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTRE-------DVV---- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~~-------~~~---- 117 (243)
|+++.+..+ ..+|++|+|+|+|+||+.+++.++.+|+ +|++++.++.+++.+...|++ +++.. +.+
T Consensus 179 ~~~l~~~~~-~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~ 257 (373)
T 2fzw_A 179 YGAAVNTAK-LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMT 257 (373)
T ss_dssp HHHHHTTTC-CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHT
T ss_pred HHHHHhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHh
Confidence 445433222 4589999999999999999999999999 899999999998888888875 33321 222
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCC-eEEEEecCCCC----CCChhHHHHhhcCeEEEeecCee-ee-EccCchhhH
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNA-AIVCNIGHFDN----EIDMLDLEAYRGIKRITIKPQTD-PW-VFPQTRRGI 189 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g-~~vvnvg~~~~----~id~~~l~~~~~~~~~~i~~~~~-~~-~~~~~~~ai 189 (243)
.++|++++|+|....+. +.++.++++ |+++.+|.... .++...+.. ++ .+..... .+ ...+..+++
T Consensus 258 ~~g~D~vid~~g~~~~~~-~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~----~~-~i~g~~~~~~~~~~~~~~~~ 331 (373)
T 2fzw_A 258 DGGVDYSFECIGNVKVMR-AALEACHKGWGVSVVVGVAASGEEIATRPFQLVT----GR-TWKGTAFGGWKSVESVPKLV 331 (373)
T ss_dssp TSCBSEEEECSCCHHHHH-HHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT----TC-EEEECSGGGCCHHHHHHHHH
T ss_pred CCCCCEEEECCCcHHHHH-HHHHhhccCCcEEEEEecCCCCceeeeCHHHHhc----CC-EEEEeccCCCCcHHHHHHHH
Confidence 16899999999877775 579999999 99999997542 244444433 22 3332211 11 112233377
Q ss_pred HhhhcCCe
Q 037949 190 IILAERLL 197 (243)
Q Consensus 190 ~ll~~G~i 197 (243)
+++++|++
T Consensus 332 ~l~~~g~l 339 (373)
T 2fzw_A 332 SEYMSKKI 339 (373)
T ss_dssp HHHHTTSS
T ss_pred HHHHcCCC
Confidence 89999987
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=4e-11 Score=106.88 Aligned_cols=141 Identities=15% Similarity=0.086 Sum_probs=100.4
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhC-CCEEEEEeCCchhHHHHhhcCCc-ccC----HHhh----h--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAV-GARVMGTEIDLICALQALTEGIP-VLT----REDV----V-- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~-Ga~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~----~-- 117 (243)
.|+++.+......+|++|+|+|+|+||+.+++.++.. |++|+++|.++++++.+.+.|++ +++ ..+. .
T Consensus 158 a~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g 237 (345)
T 3jv7_A 158 PYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGG 237 (345)
T ss_dssp HHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGG
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCC
Confidence 4677766322246899999999999999999999998 67999999999999889889985 322 2221 1
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCC-C--CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhc
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN-E--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAE 194 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~-~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~ 194 (243)
.++|++++|+|.+..++ ..++.++++|+++.+|.... . ++. .+.. ++..+.. ...+...+.+++++++++
T Consensus 238 ~g~d~v~d~~G~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~----~~~~i~g-~~~~~~~~~~~~~~l~~~ 310 (345)
T 3jv7_A 238 QGATAVFDFVGAQSTID-TAQQVVAVDGHISVVGIHAGAHAKVGF-FMIP----FGASVVT-PYWGTRSELMEVVALARA 310 (345)
T ss_dssp GCEEEEEESSCCHHHHH-HHHHHEEEEEEEEECSCCTTCCEEEST-TTSC----TTCEEEC-CCSCCHHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCHHHHH-HHHHHHhcCCEEEEECCCCCCCCCcCH-HHHh----CCCEEEE-EecCCHHHHHHHHHHHHc
Confidence 27999999999987775 57999999999999997642 2 332 1111 2233332 111222334447899999
Q ss_pred CCe
Q 037949 195 RLL 197 (243)
Q Consensus 195 G~i 197 (243)
|++
T Consensus 311 g~l 313 (345)
T 3jv7_A 311 GRL 313 (345)
T ss_dssp TCC
T ss_pred CCC
Confidence 987
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.2e-10 Score=101.80 Aligned_cols=139 Identities=17% Similarity=0.168 Sum_probs=96.9
Q ss_pred hhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHhh------hc
Q 037949 52 DGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----REDV------VS 118 (243)
Q Consensus 52 ~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~------~~ 118 (243)
+++.+.. ..+|++|+|.|+|++|..+++.++.+|++ |+++|.++.|++.++++|++ +++ ..+. ..
T Consensus 151 ~~~~~~~--~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 151 HAFHLAQ--GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELR 228 (346)
T ss_dssp HHHHHTT--CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGC
T ss_pred HHHHHhc--cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccC
Confidence 4444433 46899999999999999999999999995 57789999999889999975 332 2221 14
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC--CCh---hHHHHhhcCeEEEeecCee----eeEccCchhhH
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE--IDM---LDLEAYRGIKRITIKPQTD----PWVFPQTRRGI 189 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~--id~---~~l~~~~~~~~~~i~~~~~----~~~~~~~~~ai 189 (243)
+.|++++++|.+..++ ..++.++++++++.+|....+ +.. ..+.. +++ .+..... .+...+.++++
T Consensus 229 g~d~v~d~~G~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~-k~~---~i~G~~~~~~~~~~~~~~~~~~ 303 (346)
T 4a2c_A 229 FNQLILETAGVPQTVE-LAVEIAGPHAQLALVGTLHQDLHLTSATFGKILR-KEL---TVIGSWMNYSSPWPGQEWETAS 303 (346)
T ss_dssp SSEEEEECSCSHHHHH-HHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHH-HTC---EEEECCTTCCSSTTCHHHHHHH
T ss_pred Ccccccccccccchhh-hhhheecCCeEEEEEeccCCCccccccCHHHHhh-cee---EEEEEeccccCcchHHHHHHHH
Confidence 6899999999988886 479999999999999976432 222 22333 233 3332111 11112233377
Q ss_pred HhhhcCCe
Q 037949 190 IILAERLL 197 (243)
Q Consensus 190 ~ll~~G~i 197 (243)
+++++|++
T Consensus 304 ~l~~~g~l 311 (346)
T 4a2c_A 304 RLLTERKL 311 (346)
T ss_dssp HHHHTTCS
T ss_pred HHHHcCCC
Confidence 89999987
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.4e-10 Score=103.61 Aligned_cols=140 Identities=13% Similarity=0.106 Sum_probs=99.4
Q ss_pred hhhhhhhhccccccCcEEEEEcCC-hHHHHHHHHHHhC-CCEEEEEeCCchhHHHHhhcCCc-ccC-----H----Hhhh
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHG-DVGRGCAAALKAV-GARVMGTEIDLICALQALTEGIP-VLT-----R----EDVV 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~-Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~----~~~~ 117 (243)
.|+++.+.. ..+|++|+|+|+| +||+.+++.++.. |++|+++|+++.+++.+.+.|.+ +++ . .+..
T Consensus 159 a~~~l~~~~--~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 236 (347)
T 1jvb_A 159 TYRAVRKAS--LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRIT 236 (347)
T ss_dssp HHHHHHHTT--CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHhcC--CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHh
Confidence 467775532 4589999999999 9999999999999 99999999999988777777764 222 1 1222
Q ss_pred --cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC-C-CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh
Q 037949 118 --SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD-N-EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA 193 (243)
Q Consensus 118 --~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~-~-~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~ 193 (243)
.+.|++++++|....+. ..++.++++|+++.+|... . .++...+.. ++ ..+.. +..+...+.++++++++
T Consensus 237 ~~~~~d~vi~~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~-~~---~~i~g-~~~~~~~~~~~~~~l~~ 310 (347)
T 1jvb_A 237 ESKGVDAVIDLNNSEKTLS-VYPKALAKQGKYVMVGLFGADLHYHAPLITL-SE---IQFVG-SLVGNQSDFLGIMRLAE 310 (347)
T ss_dssp TTSCEEEEEESCCCHHHHT-TGGGGEEEEEEEEECCSSCCCCCCCHHHHHH-HT---CEEEE-CCSCCHHHHHHHHHHHH
T ss_pred cCCCceEEEECCCCHHHHH-HHHHHHhcCCEEEEECCCCCCCCCCHHHHHh-Cc---eEEEE-EeccCHHHHHHHHHHHH
Confidence 36899999999876665 4789999999999998754 2 455554443 23 23322 11122233344789999
Q ss_pred cCCe
Q 037949 194 ERLL 197 (243)
Q Consensus 194 ~G~i 197 (243)
+|++
T Consensus 311 ~g~l 314 (347)
T 1jvb_A 311 AGKV 314 (347)
T ss_dssp TTSS
T ss_pred cCCC
Confidence 9987
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.12 E-value=6.2e-11 Score=104.74 Aligned_cols=139 Identities=10% Similarity=0.042 Sum_probs=94.4
Q ss_pred hhhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC------HHhhhcCCc
Q 037949 50 LPDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT------REDVVSEAG 121 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~------~~~~~~~aD 121 (243)
.|+++.++. ..+|++|+|+| +|+||+.+++.++..|++|++++ ++.+++.+.+.|++ +++ ..+.+.++|
T Consensus 141 a~~al~~~~--~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D 217 (321)
T 3tqh_A 141 ALQALNQAE--VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAISTPVD 217 (321)
T ss_dssp HHHHHHHTT--CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEE
T ss_pred HHHHHHhcC--CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhccCCC
Confidence 567774432 46899999997 89999999999999999998887 45556677788875 332 333456899
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
++++|+|.+.. ...++.++++|+++.+|..........+.. ++ ..+..........+.++++.++++|++
T Consensus 218 ~v~d~~g~~~~--~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~l~~~g~l 287 (321)
T 3tqh_A 218 AVIDLVGGDVG--IQSIDCLKETGCIVSVPTITAGRVIEVAKQ-KH---RRAFGLLKQFNIEELHYLGKLVSEDKL 287 (321)
T ss_dssp EEEESSCHHHH--HHHGGGEEEEEEEEECCSTTHHHHHHHHHH-TT---CEEECCCCCCCHHHHHHHHHHHHTTSS
T ss_pred EEEECCCcHHH--HHHHHhccCCCEEEEeCCCCchhhhhhhhh-cc---eEEEEEecCCCHHHHHHHHHHHHCCCc
Confidence 99999998765 457999999999999886542111111222 22 223221111112233437789999987
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.9e-10 Score=102.61 Aligned_cols=140 Identities=18% Similarity=0.137 Sum_probs=98.8
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC------HHhhhc---
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT------REDVVS--- 118 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~------~~~~~~--- 118 (243)
.|+++.+. + ..+|++|+|+|+ |+||+.+++.++..|++|+++++++.+++.+...|.+ +++ ..+.+.
T Consensus 158 a~~~l~~~-~-~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~ 235 (347)
T 2hcy_A 158 VYKALKSA-N-LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKAT 235 (347)
T ss_dssp HHHHHHTT-T-CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHH
T ss_pred HHHHHHhc-C-CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHh
Confidence 36676654 2 468999999999 7999999999999999999999999888777777764 222 222221
Q ss_pred --CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC-C--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh
Q 037949 119 --EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD-N--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA 193 (243)
Q Consensus 119 --~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~-~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~ 193 (243)
++|++++++|....+. ..++.++++|+++++|... . .++...+.. ++ ..+.... .+...+.++++++++
T Consensus 236 ~~~~D~vi~~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~-~~---~~i~g~~-~~~~~~~~~~~~l~~ 309 (347)
T 2hcy_A 236 DGGAHGVINVSVSEAAIE-ASTRYVRANGTTVLVGMPAGAKCCSDVFNQVV-KS---ISIVGSY-VGNRADTREALDFFA 309 (347)
T ss_dssp TSCEEEEEECSSCHHHHH-HHTTSEEEEEEEEECCCCTTCEEEEEHHHHHH-TT---CEEEECC-CCCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCcHHHHH-HHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhh-CC---cEEEEcc-CCCHHHHHHHHHHHH
Confidence 5899999999876665 5789999999999999764 2 244444433 23 3333211 122233344789999
Q ss_pred cCCe
Q 037949 194 ERLL 197 (243)
Q Consensus 194 ~G~i 197 (243)
+|++
T Consensus 310 ~g~l 313 (347)
T 2hcy_A 310 RGLV 313 (347)
T ss_dssp TTSC
T ss_pred hCCC
Confidence 9987
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.8e-10 Score=102.93 Aligned_cols=92 Identities=20% Similarity=0.185 Sum_probs=72.8
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcc-------cCHHhhhcCCcEEEEccCChh--
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPV-------LTREDVVSEAGLFVTTTENAD-- 131 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~-------~~~~~~~~~aDvvi~a~G~~~-- 131 (243)
+++++|+|+|+|+||+.+++.++.+|++|+++|+++.++..+.. .|..+ .++.+.+.++|++++|+|.+.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~ 243 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAK 243 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccc
Confidence 67899999999999999999999999999999999988765554 45432 123455678999999987543
Q ss_pred ---cccHHHHccCCCCeEEEEecCC
Q 037949 132 ---IIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 132 ---~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+..+.++.|+++++++|+|..
T Consensus 244 ~~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 244 APKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp --CCSCHHHHTTSCTTCEEEECC--
T ss_pred cchhHHHHHHHhhcCCCEEEEEecC
Confidence 3566789999999999999875
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-10 Score=104.44 Aligned_cols=139 Identities=11% Similarity=0.027 Sum_probs=98.8
Q ss_pred hhhhhhhhccccccC------cEEEEEcCChHHHHH-HHHH-HhCCCE-EEEEeCCch---hHHHHhhcCCcccCH----
Q 037949 50 LPDGLMRATDITIAG------KIAVDCGHGDVGRGC-AAAL-KAVGAR-VMGTEIDLI---CALQALTEGIPVLTR---- 113 (243)
Q Consensus 50 ~~~av~~~~~~~l~g------~~vlViG~G~IG~~~-A~~l-~~~Ga~-V~v~d~~~~---r~~~a~~~G~~~~~~---- 113 (243)
.++++.+.. ..+| ++|+|+|+|+||+.+ ++.+ +.+|++ |++++.+++ +++.+.+.|++.++.
T Consensus 155 a~~al~~~~--~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~ 232 (357)
T 2b5w_A 155 TEKALEHAY--ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTP 232 (357)
T ss_dssp HHHHHHHHH--HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSC
T ss_pred HHHHHHhcC--CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccC
Confidence 456665432 3478 999999999999999 9999 999996 999999988 888888888753221
Q ss_pred -Hhhhc----CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHH----HHhhcCeEEEeecCeeeeE
Q 037949 114 -EDVVS----EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDL----EAYRGIKRITIKPQTDPWV 181 (243)
Q Consensus 114 -~~~~~----~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l----~~~~~~~~~~i~~~~~~~~ 181 (243)
.+ +. ++|++++|+|.+..+. ..++.++++|+++.+|... .+++...+ .. ++ ..+.... .+.
T Consensus 233 ~~~-i~~~~gg~Dvvid~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~-~~---~~i~g~~-~~~ 305 (357)
T 2b5w_A 233 VED-VPDVYEQMDFIYEATGFPKHAI-QSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVL-HN---KALVGSV-NSH 305 (357)
T ss_dssp GGG-HHHHSCCEEEEEECSCCHHHHH-HHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHH-TT---CEEEECC-CCC
T ss_pred HHH-HHHhCCCCCEEEECCCChHHHH-HHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHh-CC---eEEEEec-cCC
Confidence 12 21 5899999999876665 5799999999999998754 23555555 33 23 3333211 112
Q ss_pred ccCchhhHHhhhcC--Ce
Q 037949 182 FPQTRRGIIILAER--LL 197 (243)
Q Consensus 182 ~~~~~~ai~ll~~G--~i 197 (243)
..+..++++++++| ++
T Consensus 306 ~~~~~~~~~l~~~g~~~~ 323 (357)
T 2b5w_A 306 VEHFEAATVTFTKLPKWF 323 (357)
T ss_dssp HHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHhCchhh
Confidence 22334478999999 74
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.9e-10 Score=106.12 Aligned_cols=130 Identities=13% Similarity=0.080 Sum_probs=93.2
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH-----------------------h
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE-----------------------D 115 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~-----------------------~ 115 (243)
..+|++|+|+|+ |+||+.+++.++..|++|++++.++.+++.+.+.|++ +++.. +
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAK 297 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence 468999999998 9999999999999999999999999998888888875 33211 1
Q ss_pred h----h-cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHHhhcCeEEEeecCeeeeEccCchh
Q 037949 116 V----V-SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRR 187 (243)
Q Consensus 116 ~----~-~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 187 (243)
. . .++|++++|+|.. .+. ..+..++++|+++++|... ..++...+.. ++ ..+.. +..+...+..+
T Consensus 298 ~v~~~~g~g~Dvvid~~G~~-~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~-~~---~~i~g-~~~~~~~~~~~ 370 (447)
T 4a0s_A 298 LVVEKAGREPDIVFEHTGRV-TFG-LSVIVARRGGTVVTCGSSSGYLHTFDNRYLWM-KL---KKIVG-SHGANHEEQQA 370 (447)
T ss_dssp HHHHHHSSCCSEEEECSCHH-HHH-HHHHHSCTTCEEEESCCTTCSEEEEEHHHHHH-TT---CEEEE-CCSCCHHHHHH
T ss_pred HHHHHhCCCceEEEECCCch-HHH-HHHHHHhcCCEEEEEecCCCcccccCHHHHHh-CC---CEEEe-cCCCCHHHHHH
Confidence 1 1 3699999999984 454 5789999999999999653 2345544444 22 22322 11222223333
Q ss_pred hHHhhhcCCe
Q 037949 188 GIIILAERLL 197 (243)
Q Consensus 188 ai~ll~~G~i 197 (243)
++.++++|++
T Consensus 371 ~~~l~~~g~l 380 (447)
T 4a0s_A 371 TNRLFESGAV 380 (447)
T ss_dssp HHHHHHTTSS
T ss_pred HHHHHHcCCc
Confidence 7889999987
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=8.4e-11 Score=104.83 Aligned_cols=139 Identities=17% Similarity=0.179 Sum_probs=96.1
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.++++....+ . +|++|+|+|+|+||+.+++.++.+|+ +|+++++++.+++.+... ++ +++ ..+.+
T Consensus 153 a~~~l~~~~~-~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~ 229 (343)
T 2dq4_A 153 AVHTVYAGSG-V-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTG 229 (343)
T ss_dssp HHHHHHSTTC-C-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHS
T ss_pred HHHHHHHhCC-C-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcC
Confidence 4677752223 3 89999999999999999999999999 999999999887666655 53 332 22222
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCC--CCCh-hHHHHhhcCeEEEeecCeeee-EccCchhhHHhhh
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDM-LDLEAYRGIKRITIKPQTDPW-VFPQTRRGIIILA 193 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~-~~l~~~~~~~~~~i~~~~~~~-~~~~~~~ai~ll~ 193 (243)
.++|++++++|.+..+. ..++.++++|+++.+|.... .++. ..+.. ++ ..+.... .+ ...+..+++++++
T Consensus 230 ~g~D~vid~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~-~~---~~i~g~~-~~~~~~~~~~~~~l~~ 303 (343)
T 2dq4_A 230 SGVEVLLEFSGNEAAIH-QGLMALIPGGEARILGIPSDPIRFDLAGELVM-RG---ITAFGIA-GRRLWQTWMQGTALVY 303 (343)
T ss_dssp SCEEEEEECSCCHHHHH-HHHHHEEEEEEEEECCCCSSCEEECHHHHTGG-GT---CEEEECC-SCCTTHHHHHHHHHHH
T ss_pred CCCCEEEECCCCHHHHH-HHHHHHhcCCEEEEEecCCCCceeCcHHHHHh-Cc---eEEEEee-cCCCHHHHHHHHHHHH
Confidence 26899999999877665 57999999999999987642 2444 33322 23 3333211 11 1122333789999
Q ss_pred cCCe
Q 037949 194 ERLL 197 (243)
Q Consensus 194 ~G~i 197 (243)
+|++
T Consensus 304 ~g~~ 307 (343)
T 2dq4_A 304 SGRV 307 (343)
T ss_dssp HTSS
T ss_pred cCCC
Confidence 9986
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=99.08 E-value=4.7e-10 Score=101.23 Aligned_cols=92 Identities=21% Similarity=0.192 Sum_probs=74.4
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc---cc--C---HHhhhcCCcEEEEccCChh--
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP---VL--T---REDVVSEAGLFVTTTENAD-- 131 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~---~~--~---~~~~~~~aDvvi~a~G~~~-- 131 (243)
+++++|+|+|+|++|+.+++.++.+|++|+++|+++.+++.+...+.. +. + +.+.+.++|+||+|++.+.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~ 244 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR 244 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence 567999999999999999999999999999999999987666654432 11 2 3345678999999997654
Q ss_pred ---cccHHHHccCCCCeEEEEecCC
Q 037949 132 ---IIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 132 ---~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+..+.++.|++++++++++..
T Consensus 245 ~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 245 APILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred CCeecCHHHHhhCCCCCEEEEEecC
Confidence 2455689999999999999875
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.2e-10 Score=104.69 Aligned_cols=128 Identities=12% Similarity=0.067 Sum_probs=91.7
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc---hhHHHHhhcCCcccC---HHhhh----cCCcEEEEccCChhcc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL---ICALQALTEGIPVLT---REDVV----SEAGLFVTTTENADII 133 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~---~r~~~a~~~G~~~~~---~~~~~----~~aDvvi~a~G~~~~i 133 (243)
|++|+|+|+|+||+.+++.++.+|++|+++++++ ++++.+...|++.++ ..+.+ .++|++++++|.+..+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 260 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADVNI 260 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCCTHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCChHHH
Confidence 9999999999999999999999999999999998 887777777875332 11111 3689999999987655
Q ss_pred -cHHHHccCCCCeEEEEecCCCC---CCChhH---HHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 134 -MVRHMKQMKNAAIVCNIGHFDN---EIDMLD---LEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 134 -~~~~l~~l~~g~~vvnvg~~~~---~id~~~---l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
. ..++.++++|+++++|.... .++... +.. ++ ..+.... .+...+..+++.++++|++
T Consensus 261 ~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~---~~i~g~~-~~~~~~~~~~~~l~~~g~i 325 (366)
T 2cdc_A 261 LG-NVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVH-TN---KTIIGLV-NGQKPHFQQAVVHLASWKT 325 (366)
T ss_dssp HH-HHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHH-TT---CEEEECC-CCCHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHhcCCEEEEEecCCCCccccChhhhHHHHh-cC---cEEEEec-CCCHHHHHHHHHHHHcCCC
Confidence 5 47899999999999997642 345444 333 23 2333211 1222233447899999985
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=99.06 E-value=2.8e-10 Score=99.60 Aligned_cols=139 Identities=17% Similarity=0.126 Sum_probs=94.5
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH---Hh---hhcCCc
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR---ED---VVSEAG 121 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~---~~---~~~~aD 121 (243)
.|+++.+.. ..+|++|+|+|+ |+||+.+++.++..|++|+++++++.+++.+...|++ +++. .+ .+.++|
T Consensus 114 a~~~l~~~~--~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d 191 (302)
T 1iz0_A 114 AYLALKRAQ--ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLD 191 (302)
T ss_dssp HHHHHHHTT--CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEE
T ss_pred HHHHHHHhc--CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCce
Confidence 456765333 468999999998 8999999999999999999999999988788888875 3332 12 235799
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCCCC---CCChhHHHHhhcCeEEEeecCee-ee--EccCchhhHH---hh
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN---EIDMLDLEAYRGIKRITIKPQTD-PW--VFPQTRRGII---IL 192 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~---~id~~~l~~~~~~~~~~i~~~~~-~~--~~~~~~~ai~---ll 192 (243)
++++ +|. ..+. ..++.++++|+++.+|.... .++...+.. +++ .+..... .+ ...+.++++. ++
T Consensus 192 ~vid-~g~-~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~---~~~g~~~~~~~~~~~~~~~~~~~~~l~ 264 (302)
T 1iz0_A 192 LVLE-VRG-KEVE-ESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMR-RNL---AVLGFWLTPLLREGALVEEALGFLLPR 264 (302)
T ss_dssp EEEE-CSC-TTHH-HHHTTEEEEEEEEEC-------CCCCTTHHHH-TTC---EEEECCHHHHTTCHHHHHHHHHHHGGG
T ss_pred EEEE-CCH-HHHH-HHHHhhccCCEEEEEeCCCCCCCCcCHHHHHh-CCC---eEEEEeccchhhhHHHHHHHHhhhHHH
Confidence 9999 988 4554 57999999999999987542 355555544 233 2322110 00 1112233678 88
Q ss_pred hcCCe
Q 037949 193 AERLL 197 (243)
Q Consensus 193 ~~G~i 197 (243)
++|++
T Consensus 265 ~~g~l 269 (302)
T 1iz0_A 265 LGREL 269 (302)
T ss_dssp BTTTB
T ss_pred HcCCc
Confidence 89987
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.06 E-value=1.9e-10 Score=104.13 Aligned_cols=141 Identities=17% Similarity=0.147 Sum_probs=99.0
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----Hh---hh--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----ED---VV-- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~---~~-- 117 (243)
.++++.+. +...+|++|+|+|+|+||+.+++.++.+|+ +|+++++++++++.+.+.|++ +++. .+ .+
T Consensus 183 a~~al~~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~ 261 (380)
T 1vj0_A 183 AYHAFDEY-PESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMD 261 (380)
T ss_dssp HHHHHHTC-SSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHH
T ss_pred HHHHHHhc-CCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHH
Confidence 45777543 203589999999999999999999999995 999999999998888888875 3321 11 11
Q ss_pred ----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC-C-C--CChhH-HHHhhcCeEEEeecCeeeeEccCchhh
Q 037949 118 ----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD-N-E--IDMLD-LEAYRGIKRITIKPQTDPWVFPQTRRG 188 (243)
Q Consensus 118 ----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~-~-~--id~~~-l~~~~~~~~~~i~~~~~~~~~~~~~~a 188 (243)
.++|++++|+|.+..+. ..++.++++|+++.+|... . + ++... +.. ++ +.+.... .+...+..++
T Consensus 262 ~~~g~g~Dvvid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~~---~~i~g~~-~~~~~~~~~~ 335 (380)
T 1vj0_A 262 ITHGRGADFILEATGDSRALL-EGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVL-KN---ATFKGIW-VSDTSHFVKT 335 (380)
T ss_dssp HTTTSCEEEEEECSSCTTHHH-HHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTT-TT---CEEEECC-CCCHHHHHHH
T ss_pred HhCCCCCcEEEECCCCHHHHH-HHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHh-CC---eEEEEee-cCCHHHHHHH
Confidence 26899999999877665 5799999999999999754 2 2 44433 322 22 3333211 1122233447
Q ss_pred HHhhhc--CCe
Q 037949 189 IIILAE--RLL 197 (243)
Q Consensus 189 i~ll~~--G~i 197 (243)
++++++ |++
T Consensus 336 ~~l~~~~~g~l 346 (380)
T 1vj0_A 336 VSITSRNYQLL 346 (380)
T ss_dssp HHHHHTCHHHH
T ss_pred HHHHHhhcCCe
Confidence 899999 987
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.05 E-value=5.9e-10 Score=87.29 Aligned_cols=100 Identities=10% Similarity=0.052 Sum_probs=77.1
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHH-HhhcCCcc---cCHHhhhcCCcEEEEc
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQ-ALTEGIPV---LTREDVVSEAGLFVTT 126 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~-a~~~G~~~---~~~~~~~~~aDvvi~a 126 (243)
+++++.... ..+++++|+|+|.+|+.+++.++..|++|+++|+++.+... +...+..+ .+..+.+.++|+|+.|
T Consensus 10 ~~a~~~~~~--~~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~a 87 (144)
T 3oj0_A 10 SIVYDIVRK--NGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITA 87 (144)
T ss_dssp HHHHHHHHH--HCCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEEC
T ss_pred HHHHHHHHh--ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEe
Confidence 466655432 34999999999999999999999999999999999987644 34445542 3466778899999999
Q ss_pred cCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 127 TENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++.++.+.. .+.++++..++++|...
T Consensus 88 t~~~~~~~~--~~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 88 TSSKTPIVE--ERSLMPGKLFIDLGNPP 113 (144)
T ss_dssp SCCSSCSBC--GGGCCTTCEEEECCSSC
T ss_pred CCCCCcEee--HHHcCCCCEEEEccCCc
Confidence 987654332 26678999999998753
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=2.9e-10 Score=100.82 Aligned_cols=140 Identities=16% Similarity=0.133 Sum_probs=96.2
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHH-hhcCCc-ccC-----HHhhh----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQA-LTEGIP-VLT-----REDVV---- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a-~~~G~~-~~~-----~~~~~---- 117 (243)
.|+++.+... ..+|++|+|+|+ |+||+.+++.++..|++|+++++++.+++.+ ...|++ +++ ..+.+
T Consensus 137 A~~al~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 215 (336)
T 4b7c_A 137 AYFALLDVGQ-PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKREC 215 (336)
T ss_dssp HHHHHHHTTC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHC
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhc
Confidence 4677743323 468999999999 8999999999999999999999999988777 667875 222 22222
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---------CCCChhHHHHhhcCeEEEeecCeeeeEc-----
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---------NEIDMLDLEAYRGIKRITIKPQTDPWVF----- 182 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---------~~id~~~l~~~~~~~~~~i~~~~~~~~~----- 182 (243)
.++|++++|+|.. .+. ..++.++++|+++.+|... .+++...+.. +++ .+.... .+.+
T Consensus 216 ~~~~d~vi~~~g~~-~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~-~~~---~i~g~~-~~~~~~~~~ 288 (336)
T 4b7c_A 216 PKGIDVFFDNVGGE-ILD-TVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLV-NRA---RMEGMV-VMDYAQRFP 288 (336)
T ss_dssp TTCEEEEEESSCHH-HHH-HHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHH-TTC---EEEECC-GGGGGGGHH
T ss_pred CCCceEEEECCCcc-hHH-HHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHh-CCc---EEEEEE-hhhhhhhhH
Confidence 2589999999974 454 5799999999999998653 1344444544 233 232211 1111
Q ss_pred cCchhhHHhhhcCCe
Q 037949 183 PQTRRGIIILAERLL 197 (243)
Q Consensus 183 ~~~~~ai~ll~~G~i 197 (243)
.+.++++.++++|++
T Consensus 289 ~~~~~~~~l~~~g~l 303 (336)
T 4b7c_A 289 EGLKEMATWLAEGKL 303 (336)
T ss_dssp HHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHCCCc
Confidence 122336788899987
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=3.1e-10 Score=100.37 Aligned_cols=111 Identities=18% Similarity=0.184 Sum_probs=84.4
Q ss_pred hhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh------
Q 037949 51 PDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV------ 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~------ 117 (243)
++++.+... ..+|++|+|+| +|+||+.+++.++..|++|+++++++.+++.+.+.|++ +++ ..+.+
T Consensus 129 ~~~l~~~~~-~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~ 207 (325)
T 3jyn_A 129 QYLLRQTYQ-VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDG 207 (325)
T ss_dssp HHHHHTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTT
T ss_pred HHHHHHhcC-CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Confidence 445443322 45899999999 79999999999999999999999999998888888874 322 22211
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
.++|++++|+|. ..+. ..++.++++|+++.+|... ..++...+..
T Consensus 208 ~g~Dvvid~~g~-~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~ 255 (325)
T 3jyn_A 208 KKCPVVYDGVGQ-DTWL-TSLDSVAPRGLVVSFGNASGPVSGVNLGILAQ 255 (325)
T ss_dssp CCEEEEEESSCG-GGHH-HHHTTEEEEEEEEECCCTTCCCCSCCTHHHHH
T ss_pred CCceEEEECCCh-HHHH-HHHHHhcCCCEEEEEecCCCCCCCCCHHHHhh
Confidence 268999999998 4454 5799999999999999764 2466665544
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.8e-10 Score=101.60 Aligned_cols=101 Identities=22% Similarity=0.187 Sum_probs=81.3
Q ss_pred cCcEEEEE-cCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC----HHhhh-----cCCcEEEEccCChh
Q 037949 63 AGKIAVDC-GHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT----REDVV-----SEAGLFVTTTENAD 131 (243)
Q Consensus 63 ~g~~vlVi-G~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~~-----~~aDvvi~a~G~~~ 131 (243)
+|++|+|+ |+|+||+.+++.++..|++|++++.++.+++.+.+.|++ +++ ..+.+ .++|++++|+|.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~ 229 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDM 229 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchH
Confidence 79999999 689999999999999999999999999998888888875 332 22222 26899999999877
Q ss_pred cccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.++ ..++.++++|+++.+|.....++...+..
T Consensus 230 ~~~-~~~~~l~~~G~iv~~~~~~~~~~~~~~~~ 261 (346)
T 3fbg_A 230 YYD-DMIQLVKPRGHIATIVAFENDQDLNALKP 261 (346)
T ss_dssp HHH-HHHHHEEEEEEEEESSCCSSCBCGGGGTT
T ss_pred HHH-HHHHHhccCCEEEEECCCCCCCccccccc
Confidence 665 57899999999999886555566665543
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.04 E-value=6e-10 Score=99.27 Aligned_cols=140 Identities=16% Similarity=0.030 Sum_probs=98.3
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~- 117 (243)
.|+++.+..+ ..+|++|+|+|+ |+||+.+++.++..|++|+++++++.+++.+...|++ +++ ..+. .
T Consensus 154 a~~al~~~~~-~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 154 AWQMVVDKLG-VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTG 232 (343)
T ss_dssp HHHHHTTTSC-CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTT
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhC
Confidence 4566655322 358999999999 8999999999999999999999999988777777764 222 1121 1
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCC---CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN---EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA 193 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~---~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~ 193 (243)
.+.|++++++| ...+. ..++.++++|+++.+|.... .++...+.. +++ .+.... .+...+.++++.+++
T Consensus 233 ~~~~d~vi~~~g-~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~---~~~g~~-~~~~~~~~~~~~l~~ 305 (343)
T 2eih_A 233 GKGADKVVDHTG-ALYFE-GVIKATANGGRIAIAGASSGYEGTLPFAHVFY-RQL---SILGST-MASKSRLFPILRFVE 305 (343)
T ss_dssp TTCEEEEEESSC-SSSHH-HHHHHEEEEEEEEESSCCCSCCCCCCTTHHHH-TTC---EEEECC-SCCGGGHHHHHHHHH
T ss_pred CCCceEEEECCC-HHHHH-HHHHhhccCCEEEEEecCCCCcCccCHHHHHh-CCc---EEEEec-CccHHHHHHHHHHHH
Confidence 26899999999 55564 57899999999999997642 356555544 233 232211 122233344789999
Q ss_pred cCCe
Q 037949 194 ERLL 197 (243)
Q Consensus 194 ~G~i 197 (243)
+|++
T Consensus 306 ~g~l 309 (343)
T 2eih_A 306 EGKL 309 (343)
T ss_dssp HTSS
T ss_pred cCCC
Confidence 9986
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.03 E-value=6.1e-11 Score=101.68 Aligned_cols=125 Identities=17% Similarity=0.226 Sum_probs=77.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~ 139 (243)
.++||+++|+|++ +||+++|+.|...|++|+++|++++.+..+....+.. ..+|+ ..+..+. +.++
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~-------~~~Dv-----~~~~~v~-~~~~ 74 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRR-------EELDI-----TDSQRLQ-RLFE 74 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEE-------EECCT-----TCHHHHH-HHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEE-------EEecC-----CCHHHHH-HHHH
Confidence 3689999999998 9999999999999999999999887542211100000 01111 1122222 1233
Q ss_pred cC-CCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh--cCCeecccCCCCC
Q 037949 140 QM-KNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA--ERLLMNLGCPTGH 206 (243)
Q Consensus 140 ~l-~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~--~G~ivNl~s~~g~ 206 (243)
.. +-+.+|+|+|... .+++.+.+... +..|+...++..+. ++++|. .|+|||++|..|+
T Consensus 75 ~~g~iDiLVNNAGi~~~~~~~~~~~w~~~-------~~vNl~g~~~~~~~-~~p~m~~~~G~IVnisS~~~~ 138 (242)
T 4b79_A 75 ALPRLDVLVNNAGISRDREEYDLATFERV-------LRLNLSAAMLASQL-ARPLLAQRGGSILNIASMYST 138 (242)
T ss_dssp HCSCCSEEEECCCCCCGGGGGSHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHCEEEEEECCGGGT
T ss_pred hcCCCCEEEECCCCCCCcccCCHHHHHHH-------HHHhhHHHHHHHHH-HHHHHHHcCCeEEEEeecccc
Confidence 22 5589999999764 33555555431 33444443444444 778884 4999999997644
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=5.8e-10 Score=98.91 Aligned_cols=112 Identities=14% Similarity=0.077 Sum_probs=84.2
Q ss_pred hhhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|+++.+... ..+|++|+|+| +|+||+.+++.++..|++|+++++++.+++.+...|++ +++ ..+.+
T Consensus 136 a~~~l~~~~~-~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 136 ALSFTNEAYH-VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTN 214 (334)
T ss_dssp HHHHHHTTSC-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTT
T ss_pred HHHHHHHhcc-CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhC
Confidence 3455544322 46899999999 78999999999999999999999999998888888875 322 21211
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
.++|++++|+|. ..+. ..++.++++|+++.+|... ..++...+..
T Consensus 215 ~~g~D~vid~~g~-~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~ 263 (334)
T 3qwb_A 215 GKGVDASFDSVGK-DTFE-ISLAALKRKGVFVSFGNASGLIPPFSITRLSP 263 (334)
T ss_dssp TSCEEEEEECCGG-GGHH-HHHHHEEEEEEEEECCCTTCCCCCBCGGGGTT
T ss_pred CCCceEEEECCCh-HHHH-HHHHHhccCCEEEEEcCCCCCCCCcchhhhhh
Confidence 268999999987 4454 5789999999999999764 2355554433
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.9e-10 Score=106.64 Aligned_cols=130 Identities=12% Similarity=0.046 Sum_probs=93.3
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH----------------------hh
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE----------------------DV 116 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~----------------------~~ 116 (243)
..+|++|+|+|+ |+||+.+++.++..|++|++++.++.+++.+...|++ +++.. +.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 468999999998 9999999999999999999999999998888888875 22210 11
Q ss_pred ----h--cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHHhhcCeEEEeecCeeeeEccCchh
Q 037949 117 ----V--SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRR 187 (243)
Q Consensus 117 ----~--~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 187 (243)
. .++|++++|+|. ..+. ..+..++++|+++.+|... ..++...+.. ++ +.+.. +..+.+.+..+
T Consensus 306 i~~~t~g~g~Dvvid~~G~-~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~-~~---~~i~g-~~~~~~~~~~~ 378 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPGR-ETFG-ASVFVTRKGGTITTCASTSGYMHEYDNRYLWM-SL---KRIIG-SHFANYREAWE 378 (456)
T ss_dssp HHHHHTSCCEEEEEECSCH-HHHH-HHHHHEEEEEEEEESCCTTCSEEEEEHHHHHH-TT---CEEEE-CCSCCHHHHHH
T ss_pred HHHHhCCCCCcEEEEcCCc-hhHH-HHHHHhhCCcEEEEEecCCCcccccCHHHHHh-cC---eEEEE-eccCCHHHHHH
Confidence 1 379999999998 5554 5789999999999998653 2355544444 22 22322 11122223233
Q ss_pred hHHhhhcCCe
Q 037949 188 GIIILAERLL 197 (243)
Q Consensus 188 ai~ll~~G~i 197 (243)
+++++++|++
T Consensus 379 ~~~l~~~g~l 388 (456)
T 3krt_A 379 ANRLIAKGRI 388 (456)
T ss_dssp HHHHHHTTSS
T ss_pred HHHHHHcCCc
Confidence 7789999987
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=6.9e-10 Score=98.66 Aligned_cols=141 Identities=11% Similarity=0.078 Sum_probs=95.6
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCc-ccC------HHhhh---
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIP-VLT------REDVV--- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~-~~~------~~~~~--- 117 (243)
.|+++.+... ..+|++|+|+|+ |+||+.+++.++..|++|+++++++.+++.+. ..|++ +++ ..+.+
T Consensus 143 a~~al~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~ 221 (345)
T 2j3h_A 143 AYAGFYEVCS-PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRC 221 (345)
T ss_dssp HHHHHHTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHH
T ss_pred HHHHHHHHhC-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHH
Confidence 4667643222 358999999997 99999999999999999999999998887776 57764 222 12222
Q ss_pred --cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--------CCCChhHHHHhhcCeEEEeecCeeeeEccC---
Q 037949 118 --SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--------NEIDMLDLEAYRGIKRITIKPQTDPWVFPQ--- 184 (243)
Q Consensus 118 --~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--------~~id~~~l~~~~~~~~~~i~~~~~~~~~~~--- 184 (243)
.++|++++++|. ..+. ..++.++++|+++.+|... ..++...+.. +++ .+.... .+.+.+
T Consensus 222 ~~~~~d~vi~~~g~-~~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~-~~~---~i~g~~-~~~~~~~~~ 294 (345)
T 2j3h_A 222 FPNGIDIYFENVGG-KMLD-AVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIY-KRN---RIQGFV-VSDFYDKYS 294 (345)
T ss_dssp CTTCEEEEEESSCH-HHHH-HHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHH-HTC---EEEECC-GGGGGGGHH
T ss_pred hCCCCcEEEECCCH-HHHH-HHHHHHhcCCEEEEEccccccccCCccccccHHHHhh-hce---eeceee-ehhhhhhHH
Confidence 258999999987 4454 5799999999999998642 1244444444 233 232211 111111
Q ss_pred --chhhHHhhhcCCee
Q 037949 185 --TRRGIIILAERLLM 198 (243)
Q Consensus 185 --~~~ai~ll~~G~iv 198 (243)
..++++++++|++-
T Consensus 295 ~~~~~~~~l~~~g~i~ 310 (345)
T 2j3h_A 295 KFLEFVLPHIREGKIT 310 (345)
T ss_dssp HHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHCCCCc
Confidence 23367899999873
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.00 E-value=7.7e-10 Score=99.10 Aligned_cols=112 Identities=13% Similarity=0.168 Sum_probs=84.2
Q ss_pred hhhhhhhhccccccCcEEEEE-cCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDC-GHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlVi-G~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|+++.+... ..+|++|+|+ |+|+||+.+++.++..|++|+++++++.+++.+.+.|++ +++ ..+.+
T Consensus 155 a~~~l~~~~~-~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~ 233 (353)
T 4dup_A 155 VWANLFQMAG-LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETG 233 (353)
T ss_dssp HHHHHTTTTC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHS
T ss_pred HHHHHHHhcC-CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhC
Confidence 4566643322 4689999999 578999999999999999999999999998888888875 222 22222
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCC---C-CChhHHHH
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN---E-IDMLDLEA 164 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~---~-id~~~l~~ 164 (243)
.++|++++|+|.. .+. ..++.++++|+++.+|.... . ++...+..
T Consensus 234 ~g~Dvvid~~g~~-~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~ 282 (353)
T 4dup_A 234 QGVDIILDMIGAA-YFE-RNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMV 282 (353)
T ss_dssp SCEEEEEESCCGG-GHH-HHHHTEEEEEEEEECCCTTCSEEEEEECHHHHH
T ss_pred CCceEEEECCCHH-HHH-HHHHHhccCCEEEEEEecCCCcccCCCHHHHHh
Confidence 2689999999985 343 57899999999999997642 2 55555544
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.99 E-value=4.7e-10 Score=96.79 Aligned_cols=128 Identities=15% Similarity=0.175 Sum_probs=79.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEE-Ec-cCCh----hcc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFV-TT-TENA----DII 133 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi-~a-~G~~----~~i 133 (243)
+++||+++|+|++ +||+++|+.|...|++|+++|+++++++...+. +.+ .+.++.. .| ...+ .++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~------i~~--~g~~~~~~~~Dvt~~~~v~~~~ 75 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQE------LRG--MGKEVLGVKADVSKKKDVEEFV 75 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHH--TTCCEEEEECCTTSHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH------HHh--cCCcEEEEEccCCCHHHHHHHH
Confidence 5899999999998 999999999999999999999998876443321 000 0112211 11 0111 122
Q ss_pred cH--HHHccCCCCeEEEEecCCC-----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCC
Q 037949 134 MV--RHMKQMKNAAIVCNIGHFD-----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCP 203 (243)
Q Consensus 134 ~~--~~l~~l~~g~~vvnvg~~~-----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~ 203 (243)
+. +.|. +.+.+|+|+|... .+++.+.+... +..|+...++..+. +++.| ..|+|||++|.
T Consensus 76 ~~~~~~~G--~iDiLVNNAGi~~~~~~~~~~~~e~~~~~-------~~vNl~g~~~~~~~-~~p~m~~~~~G~IVnisS~ 145 (254)
T 4fn4_A 76 RRTFETYS--RIDVLCNNAGIMDGVTPVAEVSDELWERV-------LAVNLYSAFYSSRA-VIPIMLKQGKGVIVNTASI 145 (254)
T ss_dssp HHHHHHHS--CCCEEEECCCCCCTTCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCG
T ss_pred HHHHHHcC--CCCEEEECCcccCCCCChhhCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHHcCCcEEEEEech
Confidence 11 2355 5589999999653 23455555431 33444444444444 77766 24899999997
Q ss_pred CCC
Q 037949 204 TGH 206 (243)
Q Consensus 204 ~g~ 206 (243)
.|+
T Consensus 146 ~g~ 148 (254)
T 4fn4_A 146 AGI 148 (254)
T ss_dssp GGT
T ss_pred hhc
Confidence 654
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.98 E-value=4.9e-10 Score=96.30 Aligned_cols=130 Identities=16% Similarity=0.139 Sum_probs=78.7
Q ss_pred ccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh--HHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 60 ITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC--ALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 60 ~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r--~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
+.++||+++|+|++ +||+++|+.|...|++|+++|++... .+.....|.++.. -.+|+ ..+..+. +
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~-----~~~Dv-----~d~~~v~-~ 73 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASA-----LLIDF-----ADPLAAK-D 73 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEE-----EECCT-----TSTTTTT-T
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEE-----EEccC-----CCHHHHH-H
Confidence 35899999999998 99999999999999999999998542 2222233322110 01111 1111111 1
Q ss_pred HHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh-h---cCCeecccCCCCCcc
Q 037949 137 HMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL-A---ERLLMNLGCPTGHPS 208 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll-~---~G~ivNl~s~~g~p~ 208 (243)
.++.-+-+.+|+|+|... .+++.++|... +..|+...++..+. +++.| + .|+|||++|..|+-.
T Consensus 74 ~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~-------~~vNl~g~f~~~~~-~~~~m~~~g~~G~IVnisS~~~~~g 145 (247)
T 4hp8_A 74 SFTDAGFDILVNNAGIIRRADSVEFSELDWDEV-------MDVNLKALFFTTQA-FAKELLAKGRSGKVVNIASLLSFQG 145 (247)
T ss_dssp SSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCCEEEEEECCGGGTSC
T ss_pred HHHhCCCCEEEECCCCCCCCCcccccHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHHhCCCcEEEEEechhhCCC
Confidence 222335689999999764 23555555431 33455444444444 67544 3 389999999765433
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=3e-09 Score=95.87 Aligned_cols=92 Identities=20% Similarity=0.295 Sum_probs=75.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhc-CCcEEEEccCChhcccHHHHc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVS-EAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~-~aDvvi~a~G~~~~i~~~~l~ 139 (243)
.+.||+|+|+|+|+||+.+|+.++.+|++|+++|+++.+...+...|++.++.++.+. .+|+++.| ...+.++.+.++
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~-A~~~~I~~~~~~ 250 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPC-AMGGVITTEVAR 250 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEEC-SCSCCBCHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHh-HHHhhcCHHHHh
Confidence 5899999999999999999999999999999999998764344456766666667666 89999987 466788888888
Q ss_pred cCCCCeEEEEecCCC
Q 037949 140 QMKNAAIVCNIGHFD 154 (243)
Q Consensus 140 ~l~~g~~vvnvg~~~ 154 (243)
.|+ ..+|+|.+..+
T Consensus 251 ~lk-~~iVie~AN~p 264 (355)
T 1c1d_A 251 TLD-CSVVAGAANNV 264 (355)
T ss_dssp HCC-CSEECCSCTTC
T ss_pred hCC-CCEEEECCCCC
Confidence 887 56777877664
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.94 E-value=9e-10 Score=98.32 Aligned_cols=109 Identities=17% Similarity=0.043 Sum_probs=81.0
Q ss_pred hhhhhhhccccccC-cEEEEE-cCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 51 PDGLMRATDITIAG-KIAVDC-GHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g-~~vlVi-G~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
|+++.+.. .+| ++|+|. |+|+||+.+++.++..|++|++++.++.+++.+.+.|++ +++ ..+.+
T Consensus 154 ~~~~~~~~---~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~ 230 (349)
T 3pi7_A 154 IAMFDIVK---QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMK 230 (349)
T ss_dssp HHHHHHHH---HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHH
T ss_pred HHHHHHHh---hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhc
Confidence 44444443 355 677776 788999999999999999999999999998888888875 332 22211
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCCh-hHHHH
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDM-LDLEA 164 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~-~~l~~ 164 (243)
.++|++++|+|.+.. .+.++.++++|+++++|... ..++. ..+..
T Consensus 231 ~~g~D~vid~~g~~~~--~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~ 280 (349)
T 3pi7_A 231 AEQPRIFLDAVTGPLA--SAIFNAMPKRARWIIYGRLDPDATVIREPGQLIF 280 (349)
T ss_dssp HHCCCEEEESSCHHHH--HHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHH
T ss_pred CCCCcEEEECCCChhH--HHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhc
Confidence 379999999998764 35799999999999999643 23554 44444
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=4.5e-09 Score=93.01 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=77.9
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC------HHhhh----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT------REDVV---- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~------~~~~~---- 117 (243)
.|+++.+..+ ..+|++|+|+|+ |+||+.+++.++..|++|+++++++.+++.+...|.+ +.+ ..+.+
T Consensus 133 a~~al~~~~~-~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~ 211 (333)
T 1v3u_A 133 AYFGLLEVCG-VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKAS 211 (333)
T ss_dssp HHHHHHTTSC-CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHC
T ss_pred HHHHHHHhhC-CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHh
Confidence 4677643323 458999999998 8999999999999999999999999887777667764 222 22222
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+.|++++++|.+. +. ..++.++++|+++.+|..
T Consensus 212 ~~~~d~vi~~~g~~~-~~-~~~~~l~~~G~~v~~g~~ 246 (333)
T 1v3u_A 212 PDGYDCYFDNVGGEF-LN-TVLSQMKDFGKIAICGAI 246 (333)
T ss_dssp TTCEEEEEESSCHHH-HH-HHHTTEEEEEEEEECCCC
T ss_pred CCCCeEEEECCChHH-HH-HHHHHHhcCCEEEEEecc
Confidence 25899999998753 43 578999999999999865
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.4e-09 Score=96.97 Aligned_cols=110 Identities=19% Similarity=0.145 Sum_probs=82.6
Q ss_pred hhhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC----HHhhh------c
Q 037949 50 LPDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT----REDVV------S 118 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~----~~~~~------~ 118 (243)
.|+++.+... ..+|++|+|+| .|+||+.+++.++..|++|+++ .++.+++.+.+.|++.++ ..+.+ .
T Consensus 138 a~~~l~~~~~-~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~ 215 (343)
T 3gaz_A 138 AWEGLVDRAQ-VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQ 215 (343)
T ss_dssp HHHHHTTTTC-CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTS
T ss_pred HHHHHHHhcC-CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCC
Confidence 4566633222 45899999999 6999999999999999999999 888888888888875332 22211 3
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
++|++++|+|.. .+. ..++.++++|+++.+|... .++...+..
T Consensus 216 g~D~vid~~g~~-~~~-~~~~~l~~~G~iv~~g~~~-~~~~~~~~~ 258 (343)
T 3gaz_A 216 GFDLVYDTLGGP-VLD-ASFSAVKRFGHVVSCLGWG-THKLAPLSF 258 (343)
T ss_dssp CEEEEEESSCTH-HHH-HHHHHEEEEEEEEESCCCS-CCCCHHHHH
T ss_pred CceEEEECCCcH-HHH-HHHHHHhcCCeEEEEcccC-ccccchhhh
Confidence 699999999974 454 5789999999999998765 456555544
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.91 E-value=5.2e-10 Score=96.60 Aligned_cols=134 Identities=16% Similarity=0.177 Sum_probs=80.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALT----EGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
.++||+++|+|++ +||+++|+.|...|++|+++|++++++.+..+ .|.++.. -.+|+-- -.....+++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~-----~~~Dv~~-~~~v~~~~~- 78 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHG-----VAFDVTD-ELAIEAAFS- 78 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEE-----CCCCTTC-HHHHHHHHH-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEE-----EEeeCCC-HHHHHHHHH-
Confidence 5799999999998 99999999999999999999999887644322 1221100 0111100 000112222
Q ss_pred HHHccC-CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh-h---cCCeecccCCCCC
Q 037949 136 RHMKQM-KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL-A---ERLLMNLGCPTGH 206 (243)
Q Consensus 136 ~~l~~l-~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll-~---~G~ivNl~s~~g~ 206 (243)
+..+.. +.+.+|+|+|... .+++.+.+... +..|+...++..+. +++.| + .|+|||++|..|+
T Consensus 79 ~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~-------~~vNl~g~~~~~~~-~~p~m~~~~~~G~IVnisS~~~~ 150 (255)
T 4g81_D 79 KLDAEGIHVDILINNAGIQYRKPMVELELENWQKV-------IDTNLTSAFLVSRS-AAKRMIARNSGGKIINIGSLTSQ 150 (255)
T ss_dssp HHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCCEEEEEECCGGGT
T ss_pred HHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHHccCCCEEEEEeehhhc
Confidence 122222 5588899998764 23555555441 33444443444444 67666 2 3899999997655
Q ss_pred ccc
Q 037949 207 PSF 209 (243)
Q Consensus 207 p~~ 209 (243)
-..
T Consensus 151 ~~~ 153 (255)
T 4g81_D 151 AAR 153 (255)
T ss_dssp SBC
T ss_pred CCC
Confidence 433
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=98.90 E-value=2e-09 Score=96.41 Aligned_cols=140 Identities=14% Similarity=0.047 Sum_probs=92.5
Q ss_pred hhhhhhhhccccccC-cEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchh----HHHHhhcCCc-ccCHHh-------
Q 037949 50 LPDGLMRATDITIAG-KIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLIC----ALQALTEGIP-VLTRED------- 115 (243)
Q Consensus 50 ~~~av~~~~~~~l~g-~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r----~~~a~~~G~~-~~~~~~------- 115 (243)
.|+++.+... ..+| ++|+|+|+ |+||+.+++.++.+|++|+++..++.+ ...+...|++ +++..+
T Consensus 154 a~~~l~~~~~-~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~ 232 (364)
T 1gu7_A 154 AYLMLTHYVK-LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFG 232 (364)
T ss_dssp HHHHHHSSSC-CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGH
T ss_pred HHHHHHHhhc-cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHH
Confidence 4566654322 3579 99999998 999999999999999998887655443 3455667875 333211
Q ss_pred -hh--------cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHHhhcCeEEEeecCeeeeE--
Q 037949 116 -VV--------SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEAYRGIKRITIKPQTDPWV-- 181 (243)
Q Consensus 116 -~~--------~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~~~~~~~~~i~~~~~~~~-- 181 (243)
.+ .++|++++|+|..... +.++.++++|+++.+|... ..++...+.. ++ ..+.... .+.
T Consensus 233 ~~i~~~t~~~~~g~Dvvid~~G~~~~~--~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~---~~~~g~~-~~~~~ 305 (364)
T 1gu7_A 233 PTIKEWIKQSGGEAKLALNCVGGKSST--GIARKLNNNGLMLTYGGMSFQPVTIPTSLYIF-KN---FTSAGFW-VTELL 305 (364)
T ss_dssp HHHHHHHHHHTCCEEEEEESSCHHHHH--HHHHTSCTTCEEEECCCCSSCCEEECHHHHHH-SC---CEEEECC-HHHHH
T ss_pred HHHHHHhhccCCCceEEEECCCchhHH--HHHHHhccCCEEEEecCCCCCCcccCHHHHhh-cC---cEEEEEc-hhHhc
Confidence 11 2689999999987765 4689999999999998653 2355544443 23 3332211 111
Q ss_pred -------ccCchhhHHhhhcCCe
Q 037949 182 -------FPQTRRGIIILAERLL 197 (243)
Q Consensus 182 -------~~~~~~ai~ll~~G~i 197 (243)
..+..++++++++|++
T Consensus 306 ~~~~~~~~~~~~~~~~l~~~g~l 328 (364)
T 1gu7_A 306 KNNKELKTSTLNQIIAWYEEGKL 328 (364)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTCC
T ss_pred ccCHHHHHHHHHHHHHHHHcCCc
Confidence 0123336788899987
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.90 E-value=9.7e-10 Score=96.70 Aligned_cols=99 Identities=11% Similarity=0.063 Sum_probs=74.4
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-HHhhhcCCcEEEEcc
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-REDVVSEAGLFVTTT 127 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-~~~~~~~aDvvi~a~ 127 (243)
.|+++.+. . ..+|++|+|+|+|+||+.+++.++.+|++|++++ ++.+++.+++.|++ +++ .++.-.++|++++|+
T Consensus 131 a~~al~~~-~-~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~ 207 (315)
T 3goh_A 131 AWQAFEKI-P-LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAV 207 (315)
T ss_dssp HHHHHTTS-C-CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-
T ss_pred HHHHHhhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECC
Confidence 46777433 3 4689999999999999999999999999999999 88888888888875 332 111124689999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|.+.. . ..++.++++|+++.+|..
T Consensus 208 g~~~~-~-~~~~~l~~~G~~v~~g~~ 231 (315)
T 3goh_A 208 NSQNA-A-ALVPSLKANGHIICIQDR 231 (315)
T ss_dssp --------TTGGGEEEEEEEEEECCC
T ss_pred CchhH-H-HHHHHhcCCCEEEEEeCC
Confidence 98665 3 478999999999999754
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.1e-09 Score=95.53 Aligned_cols=129 Identities=19% Similarity=0.162 Sum_probs=78.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcccCHHhhhcCCcEEEEccCChhcccH--HH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPVLTREDVVSEAGLFVTTTENADIIMV--RH 137 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~--~~ 137 (243)
++||+++|+|++ +||+++|+.|...|++|+++|+++++++...+ .|.++.. -.+|+- +-.....+++. +.
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~-----~~~Dv~-~~~~v~~~~~~~~~~ 100 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVG-----IQADSA-NLAELDRLYEKVKAE 100 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEE-----EECCTT-CHHHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEE-----EEecCC-CHHHHHHHHHHHHHH
Confidence 789999999998 89999999999999999999999887655432 2321100 001110 00000111211 23
Q ss_pred HccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh-hcCCeecccCCCCC
Q 037949 138 MKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL-AERLLMNLGCPTGH 206 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll-~~G~ivNl~s~~g~ 206 (243)
+. +.+.+|+|+|... .+++.+.+... +..++...++..+. ++++| ..|+|||++|..|.
T Consensus 101 ~G--~iDiLVNNAG~~~~~~~~~~~~e~w~~~-------~~vNl~g~~~~~~~-~~p~m~~~G~IInisS~~~~ 164 (273)
T 4fgs_A 101 AG--RIDVLFVNAGGGSMLPLGEVTEEQYDDT-------FDRNVKGVLFTVQK-ALPLLARGSSVVLTGSTAGS 164 (273)
T ss_dssp HS--CEEEEEECCCCCCCCCTTSCCHHHHHHH-------HHHHTHHHHHHHHH-HTTTEEEEEEEEEECCGGGG
T ss_pred cC--CCCEEEECCCCCCCCChhhccHHHHHHH-------HHHHhHHHHHHHHH-HHHHHhhCCeEEEEeehhhc
Confidence 44 4478888988764 34555555441 23444443444444 67766 45999999996543
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.89 E-value=3.3e-09 Score=93.95 Aligned_cols=141 Identities=15% Similarity=0.182 Sum_probs=95.3
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~- 117 (243)
.|+++.+... ..+|++|+|+|+ |+||+.+++.++..|++|+++++++.+++.+...|.+ +++ ..+. .
T Consensus 133 a~~~l~~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~ 211 (333)
T 1wly_A 133 AQYLLHQTHK-VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITG 211 (333)
T ss_dssp HHHHHHTTSC-CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHT
T ss_pred HHHHHHHhhC-CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhC
Confidence 4567653222 458999999996 8999999999999999999999999887777777764 222 1111 1
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChh-HHHHhhcCeE--EEeecCeeeeE-c-----cC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDML-DLEAYRGIKR--ITIKPQTDPWV-F-----PQ 184 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~-~l~~~~~~~~--~~i~~~~~~~~-~-----~~ 184 (243)
.+.|++++|+|. ..+. ..++.++++|+++.+|... ..++.. .+.. ++ ..+......+. . .+
T Consensus 212 ~~~~d~vi~~~g~-~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~----~~~~~~i~g~~~~~~~~~~~~~~~ 285 (333)
T 1wly_A 212 GKGVDVVYDSIGK-DTLQ-KSLDCLRPRGMCAAYGHASGVADPIRVVEDLGV----RGSLFITRPALWHYMSNRSEIDEG 285 (333)
T ss_dssp TCCEEEEEECSCT-TTHH-HHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTT----TTSCEEECCCGGGGSCSHHHHHHH
T ss_pred CCCCeEEEECCcH-HHHH-HHHHhhccCCEEEEEecCCCCcCCCChhHhhhh----cCCcEEEEEeehhhccCHHHHHHH
Confidence 268999999998 5554 5799999999999999754 234444 3322 33 33432111111 0 11
Q ss_pred chhhHHhhhcCCe
Q 037949 185 TRRGIIILAERLL 197 (243)
Q Consensus 185 ~~~ai~ll~~G~i 197 (243)
..+++.++++|++
T Consensus 286 ~~~~~~l~~~g~l 298 (333)
T 1wly_A 286 SKCLFDAVKAGVL 298 (333)
T ss_dssp HHHHHHHHHTTSC
T ss_pred HHHHHHHHHCCCc
Confidence 2336788899987
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=6.2e-09 Score=93.21 Aligned_cols=112 Identities=12% Similarity=-0.007 Sum_probs=83.1
Q ss_pred hhhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h-
Q 037949 50 LPDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~- 117 (243)
.|+++.+..+ ..+|++|+|+| .|+||+.+++.++..|++|+++++++.+++.+...|++ +++ ..+. .
T Consensus 150 A~~al~~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 228 (354)
T 2j8z_A 150 AFQLLHLVGN-VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTK 228 (354)
T ss_dssp HHHHHTTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred HHHHHHHhcC-CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhc
Confidence 4566633223 35899999999 68999999999999999999999999988777777764 222 1111 1
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCCh-hHHHH
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDM-LDLEA 164 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~-~~l~~ 164 (243)
.+.|++++|+|.+ .+. ..++.++++|+++.+|... ..++. ..+..
T Consensus 229 ~~~~d~vi~~~G~~-~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~ 278 (354)
T 2j8z_A 229 GAGVNLILDCIGGS-YWE-KNVNCLALDGRWVLYGLMGGGDINGPLFSKLLF 278 (354)
T ss_dssp TSCEEEEEESSCGG-GHH-HHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHH
T ss_pred CCCceEEEECCCch-HHH-HHHHhccCCCEEEEEeccCCCccCCChhHHHHh
Confidence 2589999999986 454 5789999999999999753 23555 44444
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.85 E-value=7.2e-09 Score=92.34 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=76.2
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-cc----CHHhhh------
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VL----TREDVV------ 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~----~~~~~~------ 117 (243)
.|+++.+... ..+|++|+|+|+ |+||+.+++.++..|++|++++.++.+++.+.+.|++ ++ +..+.+
T Consensus 147 a~~~l~~~~~-~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~ 225 (342)
T 4eye_A 147 MYFAYARRGQ-LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGG 225 (342)
T ss_dssp HHHHHHTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTT
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCC
Confidence 4567643322 468999999998 9999999999999999999999999998888888875 22 122221
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++|++++|+|.+ .+. ..++.++++|+++.+|...
T Consensus 226 ~g~Dvvid~~g~~-~~~-~~~~~l~~~G~iv~~G~~~ 260 (342)
T 4eye_A 226 AGVDMVVDPIGGP-AFD-DAVRTLASEGRLLVVGFAA 260 (342)
T ss_dssp SCEEEEEESCC---CHH-HHHHTEEEEEEEEEC----
T ss_pred CCceEEEECCchh-HHH-HHHHhhcCCCEEEEEEccC
Confidence 2699999999985 444 5799999999999999654
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=1.4e-09 Score=93.37 Aligned_cols=127 Identities=9% Similarity=0.052 Sum_probs=76.1
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH--HHHcc
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV--RHMKQ 140 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~--~~l~~ 140 (243)
+|+|+|+|++ +||+++|+.|...|++|+++|+++.++....+.+.++.. -.+|+- +......+++. +.+.
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~-----~~~Dv~-~~~~v~~~v~~~~~~~g- 74 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFY-----FHGDVA-DPLTLKKFVEYAMEKLQ- 74 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEE-----EECCTT-SHHHHHHHHHHHHHHHS-
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEE-----EEecCC-CHHHHHHHHHHHHHHcC-
Confidence 4899999988 999999999999999999999998876544443321100 011110 00001111211 2345
Q ss_pred CCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh--hcCCeecccCCCCC
Q 037949 141 MKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL--AERLLMNLGCPTGH 206 (243)
Q Consensus 141 l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll--~~G~ivNl~s~~g~ 206 (243)
+-+.+|+|+|... .+++.+.+... +..++...++..+. +++.| ..|+|||++|..|.
T Consensus 75 -~iDiLVNNAG~~~~~~~~~~~~e~~~~~-------~~vNl~g~~~~~~~-~~~~m~~~~G~IInisS~~~~ 137 (247)
T 3ged_A 75 -RIDVLVNNACRGSKGILSSLLYEEFDYI-------LSVGLKAPYELSRL-CRDELIKNKGRIINIASTRAF 137 (247)
T ss_dssp -CCCEEEECCCCCCCCGGGTCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHTTCEEEEECCGGGT
T ss_pred -CCCEEEECCCCCCCCCcccCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHhhcCCcEEEEeecccc
Confidence 4588899998764 23555555431 23344333333334 66666 35999999996644
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=98.84 E-value=6.8e-09 Score=92.29 Aligned_cols=110 Identities=11% Similarity=0.074 Sum_probs=83.5
Q ss_pred hhhhhhhccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh------
Q 037949 51 PDGLMRATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV------ 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~------ 117 (243)
++++.+... ..+|++|+|+|+| +||+.+++.++..|++|+++++++.+++.+.+.|++ +++ ..+.+
T Consensus 133 ~~~~~~~~~-~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 133 WVTCTETLN-LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNG 211 (340)
T ss_dssp HHHHHTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTT
T ss_pred HHHHHHhcc-cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCC
Confidence 444433222 4689999999998 999999999999999999999999998888888875 322 22211
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC-CCCChhHHH
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD-NEIDMLDLE 163 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~-~~id~~~l~ 163 (243)
.++|++++|+|.+... +.++.++++|+++.+|... ..++...+.
T Consensus 212 ~g~Dvvid~~g~~~~~--~~~~~l~~~G~iv~~G~~~~~~~~~~~~~ 256 (340)
T 3gms_A 212 IGADAAIDSIGGPDGN--ELAFSLRPNGHFLTIGLLSGIQVNWAEIV 256 (340)
T ss_dssp SCEEEEEESSCHHHHH--HHHHTEEEEEEEEECCCTTSCCCCHHHHH
T ss_pred CCCcEEEECCCChhHH--HHHHHhcCCCEEEEEeecCCCCCCHHHhh
Confidence 2689999999987654 3568899999999999764 345655543
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=4.9e-09 Score=92.32 Aligned_cols=88 Identities=20% Similarity=0.234 Sum_probs=73.1
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhh--h-----cCCcEEEEccCChhccc
Q 037949 64 GKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDV--V-----SEAGLFVTTTENADIIM 134 (243)
Q Consensus 64 g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~--~-----~~aDvvi~a~G~~~~i~ 134 (243)
|+ |+|+|+ |+||+.+++.++..|++|++++.++++++.+.+.|++ +++..+. + .++|++++|+|.+ .++
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~ 225 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDK-VLA 225 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHH-HHH
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcH-HHH
Confidence 55 999998 9999999999999999999999999998888888875 3333221 1 2689999999976 454
Q ss_pred HHHHccCCCCeEEEEecCCC
Q 037949 135 VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~ 154 (243)
..++.++++|+++.+|...
T Consensus 226 -~~~~~l~~~G~iv~~G~~~ 244 (324)
T 3nx4_A 226 -KVLAQMNYGGCVAACGLAG 244 (324)
T ss_dssp -HHHHTEEEEEEEEECCCTT
T ss_pred -HHHHHHhcCCEEEEEecCC
Confidence 5799999999999999764
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.82 E-value=7.6e-09 Score=93.06 Aligned_cols=100 Identities=15% Similarity=0.138 Sum_probs=80.4
Q ss_pred cCcEEEEEc-CChHHHHHHHHHHh-CCCEEEEEeCCchhHHHHhhcCCc-ccC----HHhhh-----cCCcEEEEccCCh
Q 037949 63 AGKIAVDCG-HGDVGRGCAAALKA-VGARVMGTEIDLICALQALTEGIP-VLT----REDVV-----SEAGLFVTTTENA 130 (243)
Q Consensus 63 ~g~~vlViG-~G~IG~~~A~~l~~-~Ga~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~~-----~~aDvvi~a~G~~ 130 (243)
+|++|+|+| +|+||+.+++.++. .|++|++++.++++++.+.+.|++ +++ ..+.+ .++|++++|+|.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~ 250 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTD 250 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCch
Confidence 799999999 89999999999998 689999999999998888888985 333 22222 2689999999988
Q ss_pred hcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
..++ ..++.++++|+++.+|.. ..++...+..
T Consensus 251 ~~~~-~~~~~l~~~G~iv~~g~~-~~~~~~~~~~ 282 (363)
T 4dvj_A 251 KHAA-EIADLIAPQGRFCLIDDP-SAFDIMLFKR 282 (363)
T ss_dssp HHHH-HHHHHSCTTCEEEECSCC-SSCCGGGGTT
T ss_pred hhHH-HHHHHhcCCCEEEEECCC-CccchHHHhh
Confidence 7775 579999999999998753 3466655543
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=5.6e-09 Score=90.18 Aligned_cols=130 Identities=12% Similarity=0.033 Sum_probs=75.4
Q ss_pred ccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh---hcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 60 ITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL---TEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~---~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
+.++||+++|+|++ +||+++|+.|...|++|+++++++....... ..+.++. .-.+|+- +-.....+++.
T Consensus 3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~-----~~~~Dv~-~~~~v~~~v~~ 76 (258)
T 4gkb_A 3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRAT-----YLPVELQ-DDAQCRDAVAQ 76 (258)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCE-----EEECCTT-CHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEE-----EEEeecC-CHHHHHHHHHH
Confidence 35899999999998 9999999999999999999999876532211 1121100 0001110 00000111211
Q ss_pred --HHHccCCCCeEEEEecCCC---CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh--cCCeecccCCCC
Q 037949 136 --RHMKQMKNAAIVCNIGHFD---NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA--ERLLMNLGCPTG 205 (243)
Q Consensus 136 --~~l~~l~~g~~vvnvg~~~---~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~--~G~ivNl~s~~g 205 (243)
+.|. +-+.+|+|+|... .+.+.+.+... +..+....++..+. +++.|. .|+|||++|..|
T Consensus 77 ~~~~~G--~iDiLVNnAGi~~~~~~~~~~e~~~~~-------~~vNl~g~~~~~~~-~~p~m~~~~G~IVnisS~~~ 143 (258)
T 4gkb_A 77 TIATFG--RLDGLVNNAGVNDGIGLDAGRDAFVAS-------LERNLIHYYAMAHY-CVPHLKATRGAIVNISSKTA 143 (258)
T ss_dssp HHHHHS--CCCEEEECCCCCCCCCTTSCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEECCTHH
T ss_pred HHHHhC--CCCEEEECCCCCCCCCccCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHhcCCeEEEEeehhh
Confidence 2355 5589999999764 22333444321 22344333333334 677773 599999999753
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.79 E-value=2.1e-08 Score=91.77 Aligned_cols=91 Identities=19% Similarity=0.274 Sum_probs=70.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhH-HHHhhcCCccc---CHHhhhcCCcEEEEccCChh-cccH
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICA-LQALTEGIPVL---TREDVVSEAGLFVTTTENAD-IIMV 135 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~-~~a~~~G~~~~---~~~~~~~~aDvvi~a~G~~~-~i~~ 135 (243)
++|++|+|+|+|+||+.+++.++.+|+ +|+++|+++.++ ..+...|.+++ ++.+.+.++|+|++|+|.+. .++.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~~~~~~ 244 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIHV 244 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBCH
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCCceecH
Confidence 689999999999999999999999999 999999998875 44555676543 34556679999999998754 3555
Q ss_pred HHHcc--C--C--CCeEEEEecC
Q 037949 136 RHMKQ--M--K--NAAIVCNIGH 152 (243)
Q Consensus 136 ~~l~~--l--~--~g~~vvnvg~ 152 (243)
+.++. | + ++.++++++.
T Consensus 245 ~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 245 DDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp HHHHHHHHHCSSCCCEEEEECCS
T ss_pred HHHHHHHHhccCCCCEEEEEccC
Confidence 56766 3 2 4456666655
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=98.79 E-value=2.6e-08 Score=86.95 Aligned_cols=80 Identities=26% Similarity=0.326 Sum_probs=68.3
Q ss_pred cccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHH
Q 037949 59 DITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~ 137 (243)
+..+.|++++|+|.|. +|+.+|..|...||+|++++... .++.+.++.||+||.++|.++.++.
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t-------------~~L~~~~~~ADIVI~Avg~p~~I~~-- 219 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-------------KDLSLYTRQADLIIVAAGCVNLLRS-- 219 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SCHHHHHTTCSEEEECSSCTTCBCG--
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHHhhcCCEEEECCCCCCcCCH--
Confidence 4568999999999986 79999999999999999997543 2456678899999999999999875
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
+++|+|++|+++|+..
T Consensus 220 -~~vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 220 -DMVKEGVIVVDVGINR 235 (285)
T ss_dssp -GGSCTTEEEEECCCEE
T ss_pred -HHcCCCeEEEEeccCc
Confidence 4569999999999763
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=98.79 E-value=2.3e-08 Score=89.45 Aligned_cols=112 Identities=14% Similarity=0.130 Sum_probs=78.3
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEE-eCCch---hHHHHhhcCCc-ccCHHh--------
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGT-EIDLI---CALQALTEGIP-VLTRED-------- 115 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~-d~~~~---r~~~a~~~G~~-~~~~~~-------- 115 (243)
.|+++.+... ..+|++|+|+|+ |+||+.+++.++.+|++|+++ +.++. +++.+...|++ +++..+
T Consensus 155 a~~~l~~~~~-~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~ 233 (357)
T 1zsy_A 155 AYRMLMDFEQ-LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKN 233 (357)
T ss_dssp HHHHHHHSSC-CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGG
T ss_pred HHHHHHHHhc-cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHH
Confidence 4566644322 458999999998 999999999999999987654 44432 34566778875 343211
Q ss_pred hhc---CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 116 VVS---EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 116 ~~~---~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
... ++|++++|+|.+... +.++.++++|+++.+|... ..++...+..
T Consensus 234 ~~~~~~~~Dvvid~~g~~~~~--~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~ 286 (357)
T 1zsy_A 234 FFKDMPQPRLALNCVGGKSST--ELLRQLARGGTMVTYGGMAKQPVVASVSLLIF 286 (357)
T ss_dssp TTSSSCCCSEEEESSCHHHHH--HHHTTSCTTCEEEECCCCTTCCBCCCHHHHHH
T ss_pred HHhCCCCceEEEECCCcHHHH--HHHHhhCCCCEEEEEecCCCCCCCCCHHHHHh
Confidence 112 489999999987653 4799999999999997432 3455554443
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1e-08 Score=92.04 Aligned_cols=101 Identities=13% Similarity=0.063 Sum_probs=78.9
Q ss_pred hhhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|+++.+... ..+|++|+|+| +|+||+.+++.++..|++|+++++++++++.+...|++ +++ ..+.+
T Consensus 151 a~~al~~~~~-~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~ 229 (362)
T 2c0c_A 151 AYISLKELGG-LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYP 229 (362)
T ss_dssp HHHHHHHHTC-CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCT
T ss_pred HHHHHHHhcC-CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcC
Confidence 4566654323 35899999999 69999999999999999999999999888788888875 222 22222
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|. ..++ ..++.++++|+++.+|..
T Consensus 230 ~g~D~vid~~g~-~~~~-~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 230 EGVDVVYESVGG-AMFD-LAVDALATKGRLIVIGFI 263 (362)
T ss_dssp TCEEEEEECSCT-HHHH-HHHHHEEEEEEEEECCCG
T ss_pred CCCCEEEECCCH-HHHH-HHHHHHhcCCEEEEEeCC
Confidence 258999999987 3454 578999999999999865
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.78 E-value=4.2e-08 Score=85.64 Aligned_cols=81 Identities=30% Similarity=0.265 Sum_probs=68.6
Q ss_pred ccccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.|++|+|+|.|. +|+.+|..|...||+|++++... .++.+.++.||+||.++|.++.++.+
T Consensus 155 ~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T-------------~~L~~~~~~ADIVI~Avg~p~~I~~~ 221 (286)
T 4a5o_A 155 TGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT-------------RDLADHVSRADLVVVAAGKPGLVKGE 221 (286)
T ss_dssp TTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC-------------SCHHHHHHTCSEEEECCCCTTCBCGG
T ss_pred hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC-------------cCHHHHhccCCEEEECCCCCCCCCHH
Confidence 34568999999999986 89999999999999999996532 24566778999999999999998754
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 222 ---~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 222 ---WIKEGAIVIDVGINR 236 (286)
T ss_dssp ---GSCTTCEEEECCSCS
T ss_pred ---HcCCCeEEEEecccc
Confidence 569999999999864
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.78 E-value=4.3e-08 Score=88.32 Aligned_cols=102 Identities=14% Similarity=0.102 Sum_probs=77.5
Q ss_pred hhhhhhhhccc---cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh--
Q 037949 50 LPDGLMRATDI---TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV-- 117 (243)
Q Consensus 50 ~~~av~~~~~~---~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~-- 117 (243)
.|+++.+..+. ..+|++|+|+| +|+||+.+++.++..|++|++++ ++.+++.+...|++ +++ ..+.+
T Consensus 167 A~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~ 245 (375)
T 2vn8_A 167 AWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKS 245 (375)
T ss_dssp HHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHT
T ss_pred HHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhh
Confidence 45666432221 35899999999 69999999999999999999888 66777777788875 332 22222
Q ss_pred -cCCcEEEEccCCh-hcccHHHHccCCCCeEEEEecCC
Q 037949 118 -SEAGLFVTTTENA-DIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 -~~aDvvi~a~G~~-~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|.. ..+. ..++.++++|+++.+|..
T Consensus 246 ~~g~D~vid~~g~~~~~~~-~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 246 LKPFDFILDNVGGSTETWA-PDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp SCCBSEEEESSCTTHHHHG-GGGBCSSSCCEEEESCCS
T ss_pred cCCCCEEEECCCChhhhhH-HHHHhhcCCcEEEEeCCC
Confidence 3689999999987 4444 478999999999999865
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.8e-08 Score=86.70 Aligned_cols=80 Identities=20% Similarity=0.272 Sum_probs=68.1
Q ss_pred cccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHH
Q 037949 59 DITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~ 137 (243)
+..+.|++++|+|.|. +|+.+|..|...||+|++++... .++.+.++.||+||.++|.++.++.
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------~~L~~~~~~ADIVI~Avg~p~~I~~-- 220 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------TDLKSHTTKADILIVAVGKPNFITA-- 220 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHTTCSEEEECCCCTTCBCG--
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHhcccCCEEEECCCCCCCCCH--
Confidence 4568999999999987 79999999999999999996532 2456678899999999999998875
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
+++|+|++|+++|+..
T Consensus 221 -~~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 221 -DMVKEGAVVIDVGINH 236 (285)
T ss_dssp -GGSCTTCEEEECCCEE
T ss_pred -HHcCCCcEEEEecccC
Confidence 4569999999999863
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.77 E-value=1.3e-08 Score=83.31 Aligned_cols=102 Identities=17% Similarity=0.145 Sum_probs=76.5
Q ss_pred hhhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h-
Q 037949 50 LPDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~- 117 (243)
.|+++.+... ..+|++|+|+| .|+||+.+++.++..|++|+++++++.+++.+...|.+ +.+ ..+. .
T Consensus 26 a~~~l~~~~~-~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~ 104 (198)
T 1pqw_A 26 AWHSLCEVGR-LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTD 104 (198)
T ss_dssp HHHHHHTTSC-CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTT
T ss_pred HHHHHHHHhC-CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhC
Confidence 4566644322 35899999999 58999999999999999999999998887666666754 221 1111 1
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|++++++|. ..+. ..++.++++|+++++|...
T Consensus 105 ~~~~D~vi~~~g~-~~~~-~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 105 GYGVDVVLNSLAG-EAIQ-RGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp TCCEEEEEECCCT-HHHH-HHHHTEEEEEEEEECSCGG
T ss_pred CCCCeEEEECCch-HHHH-HHHHHhccCCEEEEEcCCC
Confidence 258999999985 3443 5789999999999998753
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=1e-08 Score=90.52 Aligned_cols=91 Identities=20% Similarity=0.167 Sum_probs=74.1
Q ss_pred ccCc-EEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhh----h-----cCCcEEEEccCC
Q 037949 62 IAGK-IAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDV----V-----SEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~-~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~----~-----~~aDvvi~a~G~ 129 (243)
.+|+ +|+|+|+ |+||+.+++.++..|++|++++.++.+++.+.+.|++ +++..+. + .++|++++|+|.
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~ 227 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG 227 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcH
Confidence 4676 8999998 9999999999999999999999998888788888875 3443221 1 258999999998
Q ss_pred hhcccHHHHccCCCCeEEEEecCCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+ .+. +.++.++++|+++.+|...
T Consensus 228 ~-~~~-~~~~~l~~~G~iv~~G~~~ 250 (330)
T 1tt7_A 228 K-QLA-SLLSKIQYGGSVAVSGLTG 250 (330)
T ss_dssp H-HHH-HHHTTEEEEEEEEECCCSS
T ss_pred H-HHH-HHHHhhcCCCEEEEEecCC
Confidence 4 554 5799999999999998753
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=98.75 E-value=2.6e-08 Score=86.48 Aligned_cols=76 Identities=11% Similarity=0.076 Sum_probs=66.0
Q ss_pred ccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHcc
Q 037949 62 IAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQ 140 (243)
Q Consensus 62 l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~ 140 (243)
+.|++|+|+|+|. +|+.+|..|...||+|++++... .++.+.++.||+||.++|.++.++.+ +
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t-------------~~L~~~~~~ADIVI~Avg~p~~I~~~---~ 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT-------------KDIGSMTRSSKIVVVAVGRPGFLNRE---M 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SCHHHHHHHSSEEEECSSCTTCBCGG---G
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc-------------ccHHHhhccCCEEEECCCCCccccHh---h
Confidence 7999999999985 89999999999999999997532 34566778999999999999988754 4
Q ss_pred CCCCeEEEEecCC
Q 037949 141 MKNAAIVCNIGHF 153 (243)
Q Consensus 141 l~~g~~vvnvg~~ 153 (243)
+|+|++|+++|+.
T Consensus 212 vk~GavVIDvgi~ 224 (276)
T 3ngx_A 212 VTPGSVVIDVGIN 224 (276)
T ss_dssp CCTTCEEEECCCE
T ss_pred ccCCcEEEEeccC
Confidence 6999999999975
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.73 E-value=1.1e-08 Score=90.31 Aligned_cols=101 Identities=15% Similarity=0.093 Sum_probs=77.0
Q ss_pred ccCc-EEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH----Hhhh-----cCCcEEEEccCC
Q 037949 62 IAGK-IAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR----EDVV-----SEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~-~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~----~~~~-----~~aDvvi~a~G~ 129 (243)
.+|+ +|+|+|+ |+||+.+++.++..|++|++++.++.+++.+...|++ +++. .+.+ .++|++++|+|.
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~ 226 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG 226 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH
Confidence 4676 8999998 9999999999999999999999998888888888875 3221 1111 258999999998
Q ss_pred hhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
. .+. +.++.++++|+++.+|... .+++...+..
T Consensus 227 ~-~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~ 262 (328)
T 1xa0_A 227 R-TLA-TVLSRMRYGGAVAVSGLTGGAEVPTTVHPFIL 262 (328)
T ss_dssp T-THH-HHHHTEEEEEEEEECSCCSSSCCCCCSHHHHH
T ss_pred H-HHH-HHHHhhccCCEEEEEeecCCCCCCCchhhhhh
Confidence 4 554 5799999999999998753 2344444433
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=4.9e-08 Score=85.76 Aligned_cols=80 Identities=24% Similarity=0.262 Sum_probs=68.4
Q ss_pred cccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHH
Q 037949 59 DITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~ 137 (243)
+..+.|++|+|+|.|. +|+.+|+.|...|++|++++... .++.+.++.||+||.++|.++.++.+
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------~~L~~~~~~ADIVI~Avg~p~~I~~~- 225 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT-------------AHLDEEVNKGDILVVATGQPEMVKGE- 225 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHTTCSEEEECCCCTTCBCGG-
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc-------------ccHHHHhccCCEEEECCCCcccCCHH-
Confidence 4568999999999995 79999999999999999997442 24566788999999999999998764
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 226 --~vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 226 --WIKPGAIVIDCGINY 240 (301)
T ss_dssp --GSCTTCEEEECCCBC
T ss_pred --HcCCCcEEEEccCCC
Confidence 368999999999864
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=6.5e-08 Score=87.11 Aligned_cols=90 Identities=10% Similarity=0.039 Sum_probs=73.6
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----cCCcEEEEccCC
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV-----SEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~-----~~aDvvi~a~G~ 129 (243)
.+|++|+|+|+ |+||+.+++.++..|++|+++. ++.+++.+...|++ +++ ..+.+ .++|++++|+|.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc
Confidence 58999999999 7999999999999999998874 78888888889985 332 22222 248999999999
Q ss_pred hhcccHHHHccC-CCCeEEEEecCC
Q 037949 130 ADIIMVRHMKQM-KNAAIVCNIGHF 153 (243)
Q Consensus 130 ~~~i~~~~l~~l-~~g~~vvnvg~~ 153 (243)
+..++ ..++.+ +++|+++.+|..
T Consensus 242 ~~~~~-~~~~~l~~~~G~iv~~g~~ 265 (371)
T 3gqv_A 242 VESTT-FCFAAIGRAGGHYVSLNPF 265 (371)
T ss_dssp HHHHH-HHHHHSCTTCEEEEESSCC
T ss_pred hHHHH-HHHHHhhcCCCEEEEEecC
Confidence 87775 478888 699999999954
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.71 E-value=2.7e-08 Score=87.78 Aligned_cols=112 Identities=17% Similarity=0.162 Sum_probs=83.4
Q ss_pred hhhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h-
Q 037949 50 LPDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~- 117 (243)
.|+++.+..+ ..+|++|+|+| .|+||+.+++.++..|++|+++++++.++..+...|.+ +.+ ..+. .
T Consensus 128 a~~al~~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 206 (327)
T 1qor_A 128 VYYLLRKTYE-IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITG 206 (327)
T ss_dssp HHHHHHTTSC-CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred HHHHHHHhhC-CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhC
Confidence 4577653222 35899999999 58999999999999999999999999887777777764 222 1111 1
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
.+.|++++|+| ...+. ..++.++++|+++.+|... ..++...+..
T Consensus 207 ~~~~D~vi~~~g-~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~ 255 (327)
T 1qor_A 207 GKKVRVVYDSVG-RDTWE-RSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQ 255 (327)
T ss_dssp TCCEEEEEECSC-GGGHH-HHHHTEEEEEEEEECCCTTCCCCCBCTHHHHH
T ss_pred CCCceEEEECCc-hHHHH-HHHHHhcCCCEEEEEecCCCCCCccCHHHHhh
Confidence 25899999999 55564 5799999999999998753 2356555544
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=98.71 E-value=3.8e-08 Score=85.98 Aligned_cols=81 Identities=25% Similarity=0.228 Sum_probs=68.6
Q ss_pred ccccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.|++|+|+|.|. +|+.+|+.|...|++|++++.... ++.+.++.||+||.++|.++.++.+
T Consensus 153 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~-------------~L~~~~~~ADIVI~Avg~p~lI~~~ 219 (288)
T 1b0a_A 153 YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-------------NLRHHVENADLLIVAVGKPGFIPGD 219 (288)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-------------CHHHHHHHCSEEEECSCCTTCBCTT
T ss_pred cCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch-------------hHHHHhccCCEEEECCCCcCcCCHH
Confidence 34568999999999996 699999999999999999975442 4566778999999999999988754
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 220 ---~vk~GavVIDVgi~r 234 (288)
T 1b0a_A 220 ---WIKEGAIVIDVGINR 234 (288)
T ss_dssp ---TSCTTCEEEECCCEE
T ss_pred ---HcCCCcEEEEccCCc
Confidence 469999999999863
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=98.70 E-value=4.8e-08 Score=88.33 Aligned_cols=92 Identities=16% Similarity=0.295 Sum_probs=69.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCcccCHHhhhc-CCcEEEEccCChhcccHHHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIPVLTREDVVS-EAGLFVTTTENADIIMVRHM 138 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~~~~~~~~~~-~aDvvi~a~G~~~~i~~~~l 138 (243)
.+.|++|+|+|+|.||..+|+.|..+|++|+++|+++.++.... ..|.+.++.++.+. .+|+++.|. ..+.++.+.+
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a-~~~~I~~~~~ 248 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-LGAVLNDFTI 248 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-CSCCBSTTHH
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc-hHHHhCHHHH
Confidence 58999999999999999999999999999999999998765433 34666556555554 899999884 4456766667
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
+.++ ..+|++.+..+
T Consensus 249 ~~lg-~~iV~e~An~p 263 (364)
T 1leh_A 249 PQLK-AKVIAGSADNQ 263 (364)
T ss_dssp HHCC-CSEECCSCSCC
T ss_pred HhCC-CcEEEeCCCCC
Confidence 7773 34555655543
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.70 E-value=3e-09 Score=91.25 Aligned_cols=42 Identities=21% Similarity=0.201 Sum_probs=37.3
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.++||+++|+|++ +||+++|+.|...|++|+++++++..++.
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~ 47 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKE 47 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 4789999999974 79999999999999999999999876543
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.70 E-value=3.7e-08 Score=88.13 Aligned_cols=112 Identities=21% Similarity=0.253 Sum_probs=83.2
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~- 117 (243)
.|+++.+..+ ..+|++|+|+|+ |+||+.+++.++..|++|+++++++.+++.+...|++ +++ ..+. .
T Consensus 158 a~~al~~~~~-~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~ 236 (351)
T 1yb5_A 158 AYRALIHSAC-VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVG 236 (351)
T ss_dssp HHHHHHTTSC-CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHC
T ss_pred HHHHHHHhhC-CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcC
Confidence 4567653223 358999999998 8999999999999999999999999988777777764 222 1111 1
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC-CCCChhHHHH
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD-NEIDMLDLEA 164 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~-~~id~~~l~~ 164 (243)
.++|++++|+|... +. +.++.++++|+++.+|... .+++...+..
T Consensus 237 ~~~~D~vi~~~G~~~-~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~ 283 (351)
T 1yb5_A 237 EKGIDIIIEMLANVN-LS-KDLSLLSHGGRVIVVGSRGTIEINPRDTMA 283 (351)
T ss_dssp TTCEEEEEESCHHHH-HH-HHHHHEEEEEEEEECCCCSCEEECTHHHHT
T ss_pred CCCcEEEEECCChHH-HH-HHHHhccCCCEEEEEecCCCCccCHHHHHh
Confidence 26899999998753 43 5789999999999999653 2355554433
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=3.5e-08 Score=88.18 Aligned_cols=101 Identities=17% Similarity=0.204 Sum_probs=77.6
Q ss_pred hhhhhhhhccccccC--cEEEEEcC-ChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-cCCc-ccC-----HHhhh-
Q 037949 50 LPDGLMRATDITIAG--KIAVDCGH-GDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-EGIP-VLT-----REDVV- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g--~~vlViG~-G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~G~~-~~~-----~~~~~- 117 (243)
.|+++.+... ..+| ++|+|+|+ |+||+.+++.++..|+ +|+++++++.+++.+.+ .|++ +++ ..+.+
T Consensus 146 a~~al~~~~~-~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~ 224 (357)
T 2zb4_A 146 SLIGIQEKGH-ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLR 224 (357)
T ss_dssp HHHHHHHHSC-CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHH
T ss_pred HHHHHHHhcC-CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHH
Confidence 4677743323 3578 99999998 8999999999999999 99999999888777765 7764 222 21222
Q ss_pred ----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 ----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+.|++++|+|. ..+. ..++.++++|+++.+|..
T Consensus 225 ~~~~~~~d~vi~~~G~-~~~~-~~~~~l~~~G~iv~~G~~ 262 (357)
T 2zb4_A 225 ESCPAGVDVYFDNVGG-NISD-TVISQMNENSHIILCGQI 262 (357)
T ss_dssp HHCTTCEEEEEESCCH-HHHH-HHHHTEEEEEEEEECCCG
T ss_pred HhcCCCCCEEEECCCH-HHHH-HHHHHhccCcEEEEECCc
Confidence 158999999986 4454 578999999999999865
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.68 E-value=5.1e-08 Score=85.64 Aligned_cols=82 Identities=24% Similarity=0.236 Sum_probs=67.8
Q ss_pred ccccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.|++++|+|.|. +|+.+|..|...|++|+++++....+. +.+.++.||+||.++|.++.++.+
T Consensus 159 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-----------l~~~~~~ADIVI~Avg~p~~I~~~ 227 (300)
T 4a26_A 159 CGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-----------MIDYLRTADIVIAAMGQPGYVKGE 227 (300)
T ss_dssp HTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-----------HHHHHHTCSEEEECSCCTTCBCGG
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-----------hhhhhccCCEEEECCCCCCCCcHH
Confidence 34568999999999986 799999999999999999987433221 125678999999999999988754
Q ss_pred HHccCCCCeEEEEecCC
Q 037949 137 HMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~ 153 (243)
++|+|++|+++|+.
T Consensus 228 ---~vk~GavVIDvgi~ 241 (300)
T 4a26_A 228 ---WIKEGAAVVDVGTT 241 (300)
T ss_dssp ---GSCTTCEEEECCCE
T ss_pred ---hcCCCcEEEEEecc
Confidence 46999999999985
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=98.68 E-value=1e-07 Score=82.77 Aligned_cols=90 Identities=14% Similarity=0.030 Sum_probs=72.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH------HH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV------RH 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~------~~ 137 (243)
++|.|||+|.+|..+|..+...|.+|+++|+++.+.+.....|... .++.+++.++|+|+.|+..+..+.. +.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 5799999999999999999999999999999999877777777754 4678888899999999886533321 22
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
.+.++++.++++.+...
T Consensus 82 ~~~l~~~~~vi~~st~~ 98 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVD 98 (287)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred hhcCCCCCEEEeCCCCC
Confidence 35678999999987543
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.68 E-value=8.8e-08 Score=84.71 Aligned_cols=92 Identities=15% Similarity=0.137 Sum_probs=74.7
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH-----H
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV-----R 136 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~-----~ 136 (243)
...+|.|||+|.+|..+|+.+...|.+|+++|+++.+.+.....|... .++.++++++|+|+.|+..+..+.. .
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~ 109 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQG 109 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchh
Confidence 457999999999999999999999999999999999876666667754 4678888999999999876543322 1
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
.++.++++.++++.+...
T Consensus 110 ~~~~l~~~~~vi~~st~~ 127 (320)
T 4dll_A 110 VAAAMKPGSLFLDMASIT 127 (320)
T ss_dssp HHHHCCTTCEEEECSCCC
T ss_pred HHhhCCCCCEEEecCCCC
Confidence 334678999999988754
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=98.67 E-value=7e-08 Score=84.01 Aligned_cols=80 Identities=25% Similarity=0.283 Sum_probs=67.8
Q ss_pred cccccCcEEEEEcCCh-HHHHHHHHHHhC--CCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 59 DITIAGKIAVDCGHGD-VGRGCAAALKAV--GARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~-IG~~~A~~l~~~--Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
+..+.|++++|+|.|. +|+.+|+.|... |++|+++++.. .++.+.++.||+||.++|.++.++.
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t-------------~~L~~~~~~ADIVI~Avg~p~~I~~ 219 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT-------------RDLPALTRQADIVVAAVGVAHLLTA 219 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC-------------SCHHHHHTTCSEEEECSCCTTCBCG
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch-------------hHHHHHHhhCCEEEECCCCCcccCH
Confidence 4468999999999996 599999999999 89999996544 2456677899999999999998876
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ++|+|++|+++|+..
T Consensus 220 ~---~vk~GavVIDVgi~r 235 (281)
T 2c2x_A 220 D---MVRPGAAVIDVGVSR 235 (281)
T ss_dssp G---GSCTTCEEEECCEEE
T ss_pred H---HcCCCcEEEEccCCC
Confidence 4 368999999999863
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.2e-07 Score=83.37 Aligned_cols=92 Identities=13% Similarity=0.088 Sum_probs=74.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH------
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV------ 135 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~------ 135 (243)
...+|.|||+|.+|..+|+.|...|.+|+++|+++.+.......|... .++.+++.++|+|+.|+..+..+..
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~ 99 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKG 99 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCch
Confidence 447899999999999999999999999999999999877777778764 4678888899999999877543321
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
..+..++++.++++.+...
T Consensus 100 ~l~~~l~~g~~vv~~st~~ 118 (310)
T 3doj_A 100 GVLEQICEGKGYIDMSTVD 118 (310)
T ss_dssp CGGGGCCTTCEEEECSCCC
T ss_pred hhhhccCCCCEEEECCCCC
Confidence 1235678999999987653
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=2.3e-08 Score=88.81 Aligned_cols=93 Identities=18% Similarity=0.211 Sum_probs=71.2
Q ss_pred cccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhH-HHHhhcCC--c-c--------cCHHhhhcCCcEEEE
Q 037949 59 DITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICA-LQALTEGI--P-V--------LTREDVVSEAGLFVT 125 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~-~~a~~~G~--~-~--------~~~~~~~~~aDvvi~ 125 (243)
+..+.|++|+|+|+|. +|+.+|+.|...|++|+++|++..+. ..+...+. . . .++.+.+.+||+||.
T Consensus 172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 3368999999999996 59999999999999999999985432 11111121 1 1 235667889999999
Q ss_pred ccCChhc-ccHHHHccCCCCeEEEEecCCC
Q 037949 126 TTENADI-IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 126 a~G~~~~-i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++|.++. ++.+ ++++|++++++|...
T Consensus 252 Atg~p~~vI~~e---~vk~GavVIDVgi~r 278 (320)
T 1edz_A 252 GVPSENYKFPTE---YIKEGAVCINFACTK 278 (320)
T ss_dssp CCCCTTCCBCTT---TSCTTEEEEECSSSC
T ss_pred CCCCCcceeCHH---HcCCCeEEEEcCCCc
Confidence 9999987 7754 469999999999874
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=4.6e-07 Score=82.18 Aligned_cols=106 Identities=17% Similarity=0.130 Sum_probs=84.9
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCC----chh---------HHHHhhcCC--cccCHHhhhcCCcE
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEID----LIC---------ALQALTEGI--PVLTREDVVSEAGL 122 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~----~~r---------~~~a~~~G~--~~~~~~~~~~~aDv 122 (243)
+..+++.+|+|+|+|..|..+|+.+...|+ +|+++|++ ..| ...+..... ...++.++++++|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADV 266 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADF 266 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSE
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCE
Confidence 335788999999999999999999999999 89999998 544 122322221 12357889999999
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHh
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAY 165 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~ 165 (243)
+|-+++ +.+++.+.++.|+++.+++..+....|+..+....|
T Consensus 267 lIG~Sa-p~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~~ 308 (388)
T 1vl6_A 267 FIGVSR-GNILKPEWIKKMSRKPVIFALANPVPEIDPELAREA 308 (388)
T ss_dssp EEECSC-SSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHHT
T ss_pred EEEeCC-CCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHHh
Confidence 999988 799999999999999988888877667887777664
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.8e-07 Score=81.96 Aligned_cols=91 Identities=18% Similarity=0.157 Sum_probs=73.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc--cCHHhhhcCCcEEEEccCChhcccH------
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV--LTREDVVSEAGLFVTTTENADIIMV------ 135 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~--~~~~~~~~~aDvvi~a~G~~~~i~~------ 135 (243)
..+|.|||+|.+|..+|..|...|.+|+++|+++.+.+.....|... .++.++++++|+|+.|+..+..+..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 36899999999999999999999999999999999877776777643 4677888899999999887543322
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
...+.++++.++++.+...
T Consensus 87 ~l~~~l~~g~ivv~~st~~ 105 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTIS 105 (303)
T ss_dssp CCGGGSCTTCEEEECSCCC
T ss_pred hHHhhCCCCCEEEecCCCC
Confidence 1235678999999987653
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=98.62 E-value=9.7e-08 Score=82.88 Aligned_cols=90 Identities=12% Similarity=0.049 Sum_probs=72.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH------HH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV------RH 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~------~~ 137 (243)
++|.|+|+|.+|..+|+.+...|.+|+++|+++.+.+.....|... .++.++++++|+|+.|+..+..+.. ..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 4799999999999999999999999999999999877666667754 4678888899999999877533321 12
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
.+.++++.++++.+...
T Consensus 82 ~~~l~~g~~vv~~st~~ 98 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVD 98 (287)
T ss_dssp GGTCCTTCEEEECSCCC
T ss_pred hhcccCCCEEEECCCCC
Confidence 45678999999987754
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=2e-07 Score=81.00 Aligned_cols=88 Identities=15% Similarity=0.049 Sum_probs=65.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-----------C--C------------c-ccCHHhhhc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-----------G--I------------P-VLTREDVVS 118 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-----------G--~------------~-~~~~~~~~~ 118 (243)
++|+|+|+|.||..+|+.+...|.+|+++|+++++++.+... | . . ..++.+.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 689999999999999999999999999999999876555432 1 1 1 234566778
Q ss_pred CCcEEEEccCCh----hcccHHHHccCCCCeEEEEecC
Q 037949 119 EAGLFVTTTENA----DIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 119 ~aDvvi~a~G~~----~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
++|+||+|+... ..+-.+....++++.++++.+.
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS 122 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSS 122 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 999999998653 2222334556789999885443
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=2.3e-07 Score=81.68 Aligned_cols=90 Identities=13% Similarity=0.122 Sum_probs=74.4
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccHH------H
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMVR------H 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~~------~ 137 (243)
++|.+||.|.+|..+|+.|...|.+|+++|+++.+.+.....|+. +.++.++++.+|+|+.|..+...+..- .
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 689999999999999999999999999999999988777778876 456889999999999998876654321 2
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
+..+++|.++|+.+...
T Consensus 84 ~~~~~~g~iiId~sT~~ 100 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIA 100 (300)
T ss_dssp TTSCCC-CEEEECSCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 45678899999987654
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=2.5e-07 Score=81.85 Aligned_cols=90 Identities=17% Similarity=0.185 Sum_probs=72.9
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCC--c-ccCHHh-hhcCCcEEEEccCChh---ccc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGI--P-VLTRED-VVSEAGLFVTTTENAD---IIM 134 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~--~-~~~~~~-~~~~aDvvi~a~G~~~---~i~ 134 (243)
-++|+|||+|.||..+|+.++..|. +|+++|+++.+++.+...|. . ..++.+ ++.++|+||.|+.... ++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl- 111 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIA- 111 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHHH-
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHHHH-
Confidence 4789999999999999999999999 99999999988877777776 2 245677 7889999999986543 23
Q ss_pred HHHHccCCCCeEEEEecCCC
Q 037949 135 VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+....++++.+|++++...
T Consensus 112 ~~l~~~l~~~~iv~d~~Svk 131 (314)
T 3ggo_A 112 KKLSYILSEDATVTDQGSVK 131 (314)
T ss_dssp HHHHHHSCTTCEEEECCSCC
T ss_pred HHHhhccCCCcEEEECCCCc
Confidence 23456689999999987654
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=98.58 E-value=2.9e-07 Score=79.42 Aligned_cols=89 Identities=18% Similarity=0.229 Sum_probs=70.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCCc---ccCHHhhhc-CCcEEEEccCChh---cccH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGIP---VLTREDVVS-EAGLFVTTTENAD---IIMV 135 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~~---~~~~~~~~~-~aDvvi~a~G~~~---~i~~ 135 (243)
++++|+|+|.||..++..++..|. +|+++|+++.+.+.+...|.. ..+..+.+. ++|+|+.|+.... ++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~- 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAK- 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHH-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHHHH-
Confidence 479999999999999999999998 999999999887776667763 235667788 9999999986543 232
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+....++++.++++++...
T Consensus 81 ~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 81 KLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp HHHHHSCTTCEEEECCSCC
T ss_pred HHHhhCCCCcEEEECCCCc
Confidence 2345678899999987654
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=98.57 E-value=2.6e-07 Score=80.12 Aligned_cols=98 Identities=21% Similarity=0.173 Sum_probs=73.0
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCccc-CHHhhhcCCcEEEEccC
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIPVL-TREDVVSEAGLFVTTTE 128 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~~~-~~~~~~~~aDvvi~a~G 128 (243)
..++.+. +..+.|++++|+|+|.+|+.++..+...|++|+++|+++++..... ..|.++. ++.+.+.++|+|+.|++
T Consensus 117 ~~~l~~~-~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp 195 (275)
T 2hk9_A 117 LKSLKSL-IPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTS 195 (275)
T ss_dssp HHHHHHH-CTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSS
T ss_pred HHHHHHh-CCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCC
Confidence 3444332 3356899999999999999999999999999999999988754433 2354433 56677789999999986
Q ss_pred Chh------cccHHHHccCCCCeEEEEecC
Q 037949 129 NAD------IIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 129 ~~~------~i~~~~l~~l~~g~~vvnvg~ 152 (243)
... .+. .+.++++.++++++.
T Consensus 196 ~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 196 VGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp TTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 532 222 356788999998877
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.4e-07 Score=84.23 Aligned_cols=90 Identities=21% Similarity=0.176 Sum_probs=70.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcCCcccCHHhhhcCCcEEEEccCChh---cccHHH
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEGIPVLTREDVVSEAGLFVTTTENAD---IIMVRH 137 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~---~i~~~~ 137 (243)
+.+++|+|||+|.||..+|+.++..|.+|+++|+++.+ ...+...|+.+.+..+++.++|+|+.|+.... ++..+.
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~~~~v~~~~i 93 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEEI 93 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHHT
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHHHHHHHHHHH
Confidence 56789999999999999999999999999999998765 45566678765577788889999999976532 232123
Q ss_pred HccCCCCeEEEEec
Q 037949 138 MKQMKNAAIVCNIG 151 (243)
Q Consensus 138 l~~l~~g~~vvnvg 151 (243)
...++++.+|+.++
T Consensus 94 ~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 94 EPNLKKGATLAFAH 107 (338)
T ss_dssp GGGCCTTCEEEESC
T ss_pred HhhCCCCCEEEEcC
Confidence 34678899988763
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.56 E-value=2e-07 Score=81.49 Aligned_cols=89 Identities=15% Similarity=0.097 Sum_probs=73.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhccc---HHHHcc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIM---VRHMKQ 140 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~---~~~l~~ 140 (243)
.+|.|||+|.+|..+|+.+...|.+|+++|+++.+.+.....|... .+++++++ +|+|+.|+..+..+. .+..+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~~ 94 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAGH 94 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999999877777777764 46788888 999999988653221 245667
Q ss_pred CCCCeEEEEecCCC
Q 037949 141 MKNAAIVCNIGHFD 154 (243)
Q Consensus 141 l~~g~~vvnvg~~~ 154 (243)
++++.++++.+...
T Consensus 95 l~~g~ivv~~st~~ 108 (296)
T 3qha_A 95 AKPGTVIAIHSTIS 108 (296)
T ss_dssp CCTTCEEEECSCCC
T ss_pred cCCCCEEEEeCCCC
Confidence 88999999987653
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.5e-07 Score=80.01 Aligned_cols=42 Identities=21% Similarity=0.202 Sum_probs=37.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 51 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQ 51 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4789999999986 89999999999999999999999876543
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.7e-07 Score=82.45 Aligned_cols=93 Identities=12% Similarity=-0.033 Sum_probs=73.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH----H
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV----R 136 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~----~ 136 (243)
...++|.|||+|.+|..+|+.++..|.+|+++|+++.+.+.....|... .++.++++++|+|+.|+..+..+.. +
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 86 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGMP 86 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTST
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhccc
Confidence 3467899999999999999999999999999999999876666667753 4678888899999999876543221 1
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
.+..++++.++++++...
T Consensus 87 ~l~~~~~g~ivid~st~~ 104 (306)
T 3l6d_A 87 GVARALAHRTIVDYTTNA 104 (306)
T ss_dssp THHHHTTTCEEEECCCCC
T ss_pred chhhccCCCEEEECCCCC
Confidence 234457899999988764
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=4.2e-07 Score=78.00 Aligned_cols=90 Identities=23% Similarity=0.227 Sum_probs=69.1
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCcccCHHhhhcCCcEEEEccCCh------hc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIPVLTREDVVSEAGLFVTTTENA------DI 132 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~~~~~~~~~~~aDvvi~a~G~~------~~ 132 (243)
..+.| +++|+|+|.+|+.++..+...|++|+++|+++.+..... ..|....++.+. .++|+|+.|++.. ..
T Consensus 113 ~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~~~~~~~~~ 190 (263)
T 2d5c_A 113 IPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKA-REARLLVNATRVGLEDPSASP 190 (263)
T ss_dssp CCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCEECCGGGG-GGCSEEEECSSTTTTCTTCCS
T ss_pred CCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccchhhHhhc-cCCCEEEEccCCCCCCCCCCC
Confidence 35688 999999999999999999999999999999987653332 334443355666 8899999998754 22
Q ss_pred ccHHHHccCCCCeEEEEecCCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+. .+.++++.++++++..+
T Consensus 191 l~---~~~l~~g~~viD~~~~p 209 (263)
T 2d5c_A 191 LP---AELFPEEGAAVDLVYRP 209 (263)
T ss_dssp SC---GGGSCSSSEEEESCCSS
T ss_pred CC---HHHcCCCCEEEEeecCC
Confidence 32 45678899999988753
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.4e-08 Score=87.83 Aligned_cols=121 Identities=14% Similarity=0.058 Sum_probs=71.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC--CcccCHHhhhcCCcEEEEccCChhcccH--
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEG--IPVLTREDVVSEAGLFVTTTENADIIMV-- 135 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G--~~~~~~~~~~~~aDvvi~a~G~~~~i~~-- 135 (243)
.++||+++|+|++ +||+++|+.|...|++|++++++..... +.... .++.+.++. ..+++.
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-~~~~~~~~Dv~~~~~v-------------~~~~~~~~ 73 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL-PEELFVEADLTTKEGC-------------AIVAEATR 73 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS-CTTTEEECCTTSHHHH-------------HHHHHHHH
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC-CcEEEEEcCCCCHHHH-------------HHHHHHHH
Confidence 5899999999988 8999999999999999999998754210 00000 011111110 111111
Q ss_pred HHHccCCCCeEEEEecCCC------CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD------NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPTG 205 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~------~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~g 205 (243)
+.+. +.+.+|+|+|... .+++.+++... +..|+...++..+. +++.|. .|+|||++|..|
T Consensus 74 ~~~G--~iDilVnnAG~~~~~~~~~~~~~~e~~~~~-------~~vNl~g~~~~~~~-~~p~m~~~~~G~Iv~isS~~~ 142 (261)
T 4h15_A 74 QRLG--GVDVIVHMLGGSSAAGGGFSALSDDDWYNE-------LSLNLFAAVRLDRQ-LVPDMVARGSGVVVHVTSIQR 142 (261)
T ss_dssp HHTS--SCSEEEECCCCCCCCSSCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCGGG
T ss_pred HHcC--CCCEEEECCCCCccCCCCcccCCHHHHHHH-------HHHHhHHHHHHHHh-hchhhhhcCCceEEEEEehhh
Confidence 2244 4578888888642 23444444431 23344333333334 676662 489999999654
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=98.52 E-value=3.7e-07 Score=79.26 Aligned_cols=90 Identities=11% Similarity=0.161 Sum_probs=70.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH------HH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV------RH 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~------~~ 137 (243)
.+++|+|+|.||..++..+...|.+|+++|+++.+.......|... .+.++.+.++|+|+.|++.+..+.. +.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 3799999999999999999999999999999998876666667653 4577778889999999986543321 12
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
...++++.++++++.+.
T Consensus 86 ~~~l~~~~~vv~~s~~~ 102 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIA 102 (299)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 35678999999987653
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.4e-07 Score=82.80 Aligned_cols=90 Identities=12% Similarity=0.150 Sum_probs=67.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhc----ccHHHHc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADI----IMVRHMK 139 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~----i~~~~l~ 139 (243)
++|.+||.|.+|..+|+.|...|.+|+++|+++.+.+...+.|... .++.++++.+|+||.|..++.. +....+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 5799999999999999999999999999999998876666677764 4678888999999999876543 3334567
Q ss_pred cCCCCeEEEEecCCC
Q 037949 140 QMKNAAIVCNIGHFD 154 (243)
Q Consensus 140 ~l~~g~~vvnvg~~~ 154 (243)
.++++.++|+.+...
T Consensus 86 ~~~~~~iiid~sT~~ 100 (297)
T 4gbj_A 86 KLGKDGVHVSMSTIS 100 (297)
T ss_dssp HHCTTCEEEECSCCC
T ss_pred hcCCCeEEEECCCCC
Confidence 789999999987653
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=98.51 E-value=5.5e-07 Score=81.16 Aligned_cols=93 Identities=15% Similarity=0.136 Sum_probs=73.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCC---cEEEEccCChh---cc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEA---GLFVTTTENAD---II 133 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~a---Dvvi~a~G~~~---~i 133 (243)
.+.+.+|.|||+|.+|..+|..|...|.+|+++|+++.+.......|+.. .++.+++..+ |+|+.|+.... ++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl 98 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSML 98 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHH
Confidence 45678999999999999999999999999999999999877766667653 4677877777 99999987652 23
Q ss_pred cHHHHccCCCCeEEEEecCCC
Q 037949 134 MVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~~ 154 (243)
......++++.+|++.+...
T Consensus 99 -~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCC
T ss_pred -HHHHhhCCCCCEEEeCCCCC
Confidence 23456688999999988764
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.51 E-value=7.2e-07 Score=77.12 Aligned_cols=101 Identities=17% Similarity=0.112 Sum_probs=70.0
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCC----cccCHHhhh-cCCcEE
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGI----PVLTREDVV-SEAGLF 123 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~----~~~~~~~~~-~~aDvv 123 (243)
++.++.+. +..++|++++|+|+|++|+.++..|...|++|++++++++++.... ..+. ++.+.++.. .++|++
T Consensus 106 ~~~~L~~~-~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~Div 184 (271)
T 1nyt_A 106 LLSDLERL-SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLI 184 (271)
T ss_dssp HHHHHHHH-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEE
T ss_pred HHHHHHhc-CcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEE
Confidence 34444332 3356899999999999999999999999999999999987753322 2221 222333332 489999
Q ss_pred EEccCChhc-----ccHHHHccCCCCeEEEEecCCC
Q 037949 124 VTTTENADI-----IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 124 i~a~G~~~~-----i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|+|+|.... +. .+.++++.+++++...+
T Consensus 185 Vn~t~~~~~~~~~~i~---~~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 185 INATSSGISGDIPAIP---SSLIHPGIYCYDMFYQK 217 (271)
T ss_dssp EECCSCGGGTCCCCCC---GGGCCTTCEEEESCCCS
T ss_pred EECCCCCCCCCCCCCC---HHHcCCCCEEEEeccCC
Confidence 999986542 32 23357888888887754
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.51 E-value=8.9e-08 Score=82.46 Aligned_cols=127 Identities=15% Similarity=0.189 Sum_probs=72.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEE-Ec-cCChhcccH---
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFV-TT-TENADIIMV--- 135 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi-~a-~G~~~~i~~--- 135 (243)
+.+|+++|+|++ +||+.+|+.|...|++|+++++++.++...... +.+ .+.++.+ .+ ......+..
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~------l~~--~~~~~~~~~~Dv~d~~~v~~~~~ 73 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATE------IRD--AGGTALAQVLDVTDRHSVAAFAQ 73 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH------HHH--TTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHh--cCCcEEEEEcCCCCHHHHHHHHH
Confidence 468999999986 899999999999999999999998765433210 000 0112211 11 111221211
Q ss_pred ---HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCCC
Q 037949 136 ---RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPTG 205 (243)
Q Consensus 136 ---~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~g 205 (243)
+.+. +.+.+|+|+|... .+.+.+.+... +..++....+-... ++..| ..|+|||++|..+
T Consensus 74 ~~~~~~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~-------~~vN~~g~~~l~~~-~~~~m~~~~~g~IV~isS~~~ 143 (264)
T 3tfo_A 74 AAVDTWG--RIDVLVNNAGVMPLSPLAAVKVDEWERM-------IDVNIKGVLWGIGA-VLPIMEAQRSGQIINIGSIGA 143 (264)
T ss_dssp HHHHHHS--CCCEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCGGG
T ss_pred HHHHHcC--CCCEEEECCCCCCCCCcccCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHhCCCeEEEEEcCHHH
Confidence 1123 5688888888764 12444444331 22333222222223 55655 3489999999654
Q ss_pred C
Q 037949 206 H 206 (243)
Q Consensus 206 ~ 206 (243)
.
T Consensus 144 ~ 144 (264)
T 3tfo_A 144 L 144 (264)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.50 E-value=2.2e-07 Score=81.68 Aligned_cols=87 Identities=20% Similarity=0.195 Sum_probs=65.3
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-------CCcc-cCHHhhhcCCcEEEEccCChhccc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-------GIPV-LTREDVVSEAGLFVTTTENADIIM 134 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-------G~~~-~~~~~~~~~aDvvi~a~G~~~~i~ 134 (243)
.-|+|.|+|+|.+|..+|+.++ .|.+|+++|+++++++.+... ++.. .++++ +.+||+||+|......+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk 88 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTK 88 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHH
Confidence 4589999999999999999999 999999999999987766654 3432 24444 789999999986544332
Q ss_pred HHH---HccCCCCeEEE-EecC
Q 037949 135 VRH---MKQMKNAAIVC-NIGH 152 (243)
Q Consensus 135 ~~~---l~~l~~g~~vv-nvg~ 152 (243)
... ++.+ ++++++ |.+.
T Consensus 89 ~~l~~~l~~~-~~~IlasntSt 109 (293)
T 1zej_A 89 VEVLREVERL-TNAPLCSNTSV 109 (293)
T ss_dssp HHHHHHHHTT-CCSCEEECCSS
T ss_pred HHHHHHHhcC-CCCEEEEECCC
Confidence 222 5666 888885 6544
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=2.5e-07 Score=72.99 Aligned_cols=72 Identities=14% Similarity=0.075 Sum_probs=56.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCccc--C---H---Hhh-hcCCcEEEEccCCh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIPVL--T---R---EDV-VSEAGLFVTTTENA 130 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~~~--~---~---~~~-~~~aDvvi~a~G~~ 130 (243)
...+++++|+|+|.+|+.+++.|+..|.+|+++|+++.++..+. ..|..++ + . .+. +.++|+|+.|+++.
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 45789999999999999999999999999999999998875554 4565322 1 1 222 56899999999876
Q ss_pred hc
Q 037949 131 DI 132 (243)
Q Consensus 131 ~~ 132 (243)
..
T Consensus 96 ~~ 97 (155)
T 2g1u_A 96 ST 97 (155)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.49 E-value=2.9e-07 Score=78.73 Aligned_cols=130 Identities=15% Similarity=0.163 Sum_probs=74.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEcc-CChhcccHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTTT-ENADIIMVRH 137 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a~-G~~~~i~~~~ 137 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++...... +.+ ....++. +.+- ..+..+. +.
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~------l~~-~~~~~~~~~~~Dv~~~~~v~-~~ 78 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVAD------LDQ-LGSGKVIGVQTDVSDRAQCD-AL 78 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHT-TSSSCEEEEECCTTSHHHHH-HH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------HHh-hCCCcEEEEEcCCCCHHHHH-HH
Confidence 4689999999986 999999999999999999999998765433210 000 0001221 1221 1222221 11
Q ss_pred HccC-----CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCCC
Q 037949 138 MKQM-----KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPTG 205 (243)
Q Consensus 138 l~~l-----~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~g 205 (243)
++.+ +.+.+|+|+|... .+.+.+.+... +..++....+-... ++..| ..|+|||++|..+
T Consensus 79 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~-------~~~N~~g~~~~~~~-~~~~m~~~~~g~iv~isS~~~ 150 (262)
T 3pk0_A 79 AGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGI-------FAVNVNGTFYAVQA-CLDALIASGSGRVVLTSSITG 150 (262)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHSSCEEEEECCSBT
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH-------HHHhhHHHHHHHHH-HHHHHHhcCCcEEEEEechhh
Confidence 2211 5688888888763 23444444331 22333222222223 55655 3589999999765
Q ss_pred C
Q 037949 206 H 206 (243)
Q Consensus 206 ~ 206 (243)
.
T Consensus 151 ~ 151 (262)
T 3pk0_A 151 P 151 (262)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=98.48 E-value=6.5e-08 Score=87.41 Aligned_cols=87 Identities=11% Similarity=0.016 Sum_probs=66.6
Q ss_pred hhhhhhhccccccCcEEEEE--cCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 51 PDGLMRATDITIAGKIAVDC--GHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlVi--G~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
|+++.+.. .+|++|+|+ |+|+||+.+++.++..|++|++++.++.+++.+.+.|++ +++ ..+.+
T Consensus 161 ~~~~~~~~---~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~~t~ 237 (379)
T 3iup_A 161 LGMVETMR---LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALV 237 (379)
T ss_dssp HHHHHHHH---HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHHHHH
T ss_pred HHHHHHhc---cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHHHhc
Confidence 45554432 589999999 789999999999999999999999999999888888875 332 22222
Q ss_pred -cCCcEEEEccCChhcccHHHHccC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQM 141 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l 141 (243)
.++|++++|+|.+..++ ..++.+
T Consensus 238 ~~g~d~v~d~~g~~~~~~-~~~~~l 261 (379)
T 3iup_A 238 STGATIAFDATGGGKLGG-QILTCM 261 (379)
T ss_dssp HHCCCEEEESCEEESHHH-HHHHHH
T ss_pred CCCceEEEECCCchhhHH-HHHHhc
Confidence 36999999999866544 345555
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.48 E-value=8.4e-08 Score=81.71 Aligned_cols=129 Identities=12% Similarity=0.062 Sum_probs=73.1
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEE-Ec-cCChhcccHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFV-TT-TENADIIMVRH 137 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi-~a-~G~~~~i~~~~ 137 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++...... +.+ .+.++.+ .+ ......+. +.
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~--~~~~~~~~~~Dv~~~~~v~-~~ 74 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAE------IEA--AGGRIVARSLDARNEDEVT-AF 74 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH------HHH--TTCEEEEEECCTTCHHHHH-HH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------HHh--cCCeEEEEECcCCCHHHHH-HH
Confidence 3679999999987 899999999999999999999998775433221 000 0112211 11 11222222 12
Q ss_pred HccC----CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCCCC
Q 037949 138 MKQM----KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPTGH 206 (243)
Q Consensus 138 l~~l----~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~g~ 206 (243)
++.+ +.+.+|+|+|... .+.+.+.+... +..++....+-... ++..|. .|+|||++|..+.
T Consensus 75 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~-------~~~N~~g~~~~~~~-~~~~~~~~~~g~iv~isS~~~~ 146 (252)
T 3h7a_A 75 LNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKV-------WEMACWAGFVSGRE-SARLMLAHGQGKIFFTGATASL 146 (252)
T ss_dssp HHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEEEEGGGT
T ss_pred HHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHhcCCcEEEEECCHHHc
Confidence 2222 4578888888753 12444444331 22333222222222 555553 3899999996543
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.48 E-value=6.9e-07 Score=78.97 Aligned_cols=88 Identities=13% Similarity=0.168 Sum_probs=69.6
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCc-------hhHHHHhhcCCccc-CHHhhhcCCcEEEEccCChhccc-
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDL-------ICALQALTEGIPVL-TREDVVSEAGLFVTTTENADIIM- 134 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~-------~r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G~~~~i~- 134 (243)
.+|.|||+|.+|..+|..|...| .+|+++|+++ .........|. .. ++.++++++|+|+.|+..+....
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~~e~~~~aDvVi~avp~~~~~~~ 103 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDDVAGIACADVVLSLVVGAATKAV 103 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESSGGGGGGCSEEEECCCGGGHHHH
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCHHHHHhcCCEEEEecCCHHHHHH
Confidence 68999999999999999999999 8999999997 34444445576 55 67788889999999987654321
Q ss_pred -HHHHccCCCCeEEEEecCC
Q 037949 135 -VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 135 -~~~l~~l~~g~~vvnvg~~ 153 (243)
.+..+.++++.+|++.+..
T Consensus 104 ~~~i~~~l~~~~ivv~~st~ 123 (317)
T 4ezb_A 104 AASAAPHLSDEAVFIDLNSV 123 (317)
T ss_dssp HHHHGGGCCTTCEEEECCSC
T ss_pred HHHHHhhcCCCCEEEECCCC
Confidence 2345678899999998754
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.6e-07 Score=79.88 Aligned_cols=42 Identities=21% Similarity=0.407 Sum_probs=37.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~ 66 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVR 66 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4789999999987 99999999999999999999999876543
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2.9e-07 Score=78.75 Aligned_cols=42 Identities=21% Similarity=0.138 Sum_probs=37.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~ 47 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRA 47 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4789999999987 99999999999999999999999876543
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=3.8e-07 Score=76.14 Aligned_cols=89 Identities=15% Similarity=0.139 Sum_probs=67.1
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHH--HccC
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRH--MKQM 141 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~--l~~l 141 (243)
..+++|+|+|.+|..++..+...|.+|+++|+++.+.......|....+..+.+.++|+|+.|+.... +. +. +...
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~~~-~~-~v~~l~~~ 105 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFREH-YS-SLCSLSDQ 105 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCGGG-SG-GGGGGHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCChHH-HH-HHHHHHHh
Confidence 46899999999999999999999999999999988765555556655566777889999999986532 21 12 2222
Q ss_pred CCCeEEEEecCCC
Q 037949 142 KNAAIVCNIGHFD 154 (243)
Q Consensus 142 ~~g~~vvnvg~~~ 154 (243)
.++.++++++.+.
T Consensus 106 ~~~~~vv~~s~g~ 118 (215)
T 2vns_A 106 LAGKILVDVSNPT 118 (215)
T ss_dssp HTTCEEEECCCCC
T ss_pred cCCCEEEEeCCCc
Confidence 3688999887763
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=4.6e-07 Score=78.08 Aligned_cols=89 Identities=13% Similarity=0.012 Sum_probs=67.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhccc---HHHHccC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIM---VRHMKQM 141 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~---~~~l~~l 141 (243)
.+++|+|+|.+|..++..+.. |.+|+++|+++.+.......|....+..+.+.++|+|+.|+..+..+. .+....+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l 80 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL 80 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHHHHHHhhC
Confidence 369999999999999999999 999999999988765555556543335566778999999988664222 1233567
Q ss_pred CCCeEEEEecCCC
Q 037949 142 KNAAIVCNIGHFD 154 (243)
Q Consensus 142 ~~g~~vvnvg~~~ 154 (243)
+++.++++++...
T Consensus 81 ~~~~~vv~~s~~~ 93 (289)
T 2cvz_A 81 REGTYWVDATSGE 93 (289)
T ss_dssp CTTEEEEECSCCC
T ss_pred CCCCEEEECCCCC
Confidence 8899999887643
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.44 E-value=1.5e-07 Score=80.21 Aligned_cols=41 Identities=24% Similarity=0.358 Sum_probs=37.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++.
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 50 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAE 50 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4789999999987 8999999999999999999999987653
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.44 E-value=6.3e-07 Score=66.31 Aligned_cols=68 Identities=16% Similarity=0.096 Sum_probs=53.2
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCcc-----cC---HHhhhcCCcEEEEccCCh
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIPV-----LT---REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~~-----~~---~~~~~~~aDvvi~a~G~~ 130 (243)
.+++++|+|+|.||+.+++.|...| .+|+++|+++.+.......+... .+ +.+.+.++|+|+.|+|..
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~ 80 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF 80 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch
Confidence 4689999999999999999999999 79999999998875555445432 12 234567899999998643
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.44 E-value=8e-07 Score=77.95 Aligned_cols=88 Identities=16% Similarity=0.123 Sum_probs=69.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccHHHH-----
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMVRHM----- 138 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~~~l----- 138 (243)
.+++|+|+|.||..++..+...|.+|+++|+++.+.......|..+ .+..+.+.++|+|+.|+..+..+.. .+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~-v~~~~~~ 109 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKD-LVLGPSG 109 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHH-HHHSTTC
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHH-HHcCchh
Confidence 6799999999999999999999999999999998876666667653 3566777889999999885543322 22
Q ss_pred --ccCCCCeEEEEecCC
Q 037949 139 --KQMKNAAIVCNIGHF 153 (243)
Q Consensus 139 --~~l~~g~~vvnvg~~ 153 (243)
+.++++.+|++++..
T Consensus 110 ~~~~l~~~~~vv~~s~~ 126 (316)
T 2uyy_A 110 VLQGIRPGKCYVDMSTV 126 (316)
T ss_dssp GGGGCCTTCEEEECSCC
T ss_pred HhhcCCCCCEEEECCCC
Confidence 457889999988754
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.44 E-value=4e-07 Score=81.13 Aligned_cols=99 Identities=13% Similarity=0.107 Sum_probs=67.8
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCc-ccC----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIP-VLT----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~~----- 117 (243)
.|+++.+... ..+|++|+|+|+ |++|+.+++.++..| ++|++++ ++.+++.+. .|++ +++ ..+.+
T Consensus 130 a~~~l~~~~~-~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~~~~~~~~~~~~~~~ 206 (349)
T 4a27_A 130 AYVMLFEVAN-LREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFDRNADYVQEVKRISA 206 (349)
T ss_dssp HHHHHHTTSC-CCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEETTSCHHHHHHHHCT
T ss_pred HHHHHHHhcC-CCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEcCCccHHHHHHHhcC
Confidence 3556543323 468999999999 899999999999986 5888887 555665555 7765 322 22222
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|.+.. . ..++.++++|+++.+|..
T Consensus 207 ~g~Dvv~d~~g~~~~-~-~~~~~l~~~G~~v~~G~~ 240 (349)
T 4a27_A 207 EGVDIVLDCLCGDNT-G-KGLSLLKPLGTYILYGSS 240 (349)
T ss_dssp TCEEEEEEECC---------CTTEEEEEEEEEEC--
T ss_pred CCceEEEECCCchhH-H-HHHHHhhcCCEEEEECCC
Confidence 369999999998664 3 578999999999999865
|
| >4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=1.2e-06 Score=76.97 Aligned_cols=81 Identities=27% Similarity=0.335 Sum_probs=69.1
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+++|+|-+ -+|+.++..|...||.|+++.... .++.+.++.||+++.++|.++.+..
T Consensus 173 ~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T-------------~dl~~~~~~ADIvV~A~G~p~~i~~- 238 (303)
T 4b4u_A 173 NNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT-------------QNLPELVKQADIIVGAVGKAELIQK- 238 (303)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHHTCSEEEECSCSTTCBCG-
T ss_pred HCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC-------------CCHHHHhhcCCeEEeccCCCCcccc-
Confidence 4557899999999999 799999999999999999985533 2455667899999999999999975
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
+++|+|++|+++|+..
T Consensus 239 --d~vk~GavVIDVGin~ 254 (303)
T 4b4u_A 239 --DWIKQGAVVVDAGFHP 254 (303)
T ss_dssp --GGSCTTCEEEECCCBC
T ss_pred --ccccCCCEEEEeceec
Confidence 4579999999999863
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.42 E-value=1.3e-06 Score=76.64 Aligned_cols=92 Identities=21% Similarity=0.219 Sum_probs=68.7
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-hcCC---cccC---HHhhhcCCcEEEEccCChh
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-TEGI---PVLT---REDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~~G~---~~~~---~~~~~~~aDvvi~a~G~~~ 131 (243)
..+.+++++|+|+|++|+.++..|...|+ +|++++++++++.... ..+. ++.+ +.+.+.++|+||+|++...
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 35689999999999999999999999998 9999999988754332 3333 3333 3445678999999986532
Q ss_pred c-------ccHHHHccCCCCeEEEEecCCC
Q 037949 132 I-------IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~-------i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
. +. .+.++++.+++++...+
T Consensus 217 ~~~~~~~~i~---~~~l~~~~~v~D~~y~P 243 (297)
T 2egg_A 217 HPRVEVQPLS---LERLRPGVIVSDIIYNP 243 (297)
T ss_dssp SSCCSCCSSC---CTTCCTTCEEEECCCSS
T ss_pred CCCCCCCCCC---HHHcCCCCEEEEcCCCC
Confidence 1 21 34568899999988753
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.42 E-value=2.6e-07 Score=79.03 Aligned_cols=42 Identities=19% Similarity=0.179 Sum_probs=37.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 50 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLED 50 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHH
Confidence 3689999999987 89999999999999999999999876543
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.42 E-value=2.4e-07 Score=80.23 Aligned_cols=42 Identities=38% Similarity=0.355 Sum_probs=34.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 72 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDA 72 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 4689999999986 89999999999999999999999876543
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=4e-07 Score=79.36 Aligned_cols=39 Identities=31% Similarity=0.263 Sum_probs=35.5
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++..
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~ 68 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETF 68 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHH
Confidence 4789999999986 89999999999999999999998754
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=98.41 E-value=9.7e-07 Score=76.44 Aligned_cols=88 Identities=16% Similarity=0.178 Sum_probs=68.2
Q ss_pred cEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh---cccHHHHcc
Q 037949 65 KIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD---IIMVRHMKQ 140 (243)
Q Consensus 65 ~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~---~i~~~~l~~ 140 (243)
.+++|+|+ |.+|..++..+...|.+|+++|+++.+.......|.+..+..+.+.++|+|+.|+.... ++. +....
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~~~~v~~-~l~~~ 90 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNIIEKVAE-DIVPR 90 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHHHHHHHH-HHGGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchHHHHHHH-HHHHh
Confidence 58999999 99999999999999999999999988776655567654456667789999999986543 222 23345
Q ss_pred CCCCeEEEEecCC
Q 037949 141 MKNAAIVCNIGHF 153 (243)
Q Consensus 141 l~~g~~vvnvg~~ 153 (243)
++++.++++.+.+
T Consensus 91 l~~~~ivv~~s~~ 103 (286)
T 3c24_A 91 VRPGTIVLILDAA 103 (286)
T ss_dssp SCTTCEEEESCSH
T ss_pred CCCCCEEEECCCC
Confidence 6788999885543
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.41 E-value=4.2e-07 Score=76.54 Aligned_cols=40 Identities=20% Similarity=0.127 Sum_probs=35.5
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+|+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~ 42 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQ 42 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 47899999986 99999999999999999999999877543
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.41 E-value=3.7e-07 Score=77.75 Aligned_cols=41 Identities=37% Similarity=0.426 Sum_probs=37.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.++..
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 47 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQ 47 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 679999999986 99999999999999999999999876543
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.41 E-value=4.1e-07 Score=77.92 Aligned_cols=131 Identities=18% Similarity=0.138 Sum_probs=74.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEc-cCChhcccHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTT-TENADIIMVRH 137 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a-~G~~~~i~~~~ 137 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++...... +.+...+..+. +.+ ......+. +.
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~------l~~~~~~~~~~~~~~D~~~~~~~~-~~ 79 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKE------IRAQYPDAILQPVVADLGTEQGCQ-DV 79 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH------HHHHCTTCEEEEEECCTTSHHHHH-HH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------HHhhCCCceEEEEecCCCCHHHHH-HH
Confidence 4689999999986 999999999999999999999998765432210 00000011111 111 12222232 23
Q ss_pred HccC-CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCCCC
Q 037949 138 MKQM-KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPTGH 206 (243)
Q Consensus 138 l~~l-~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~g~ 206 (243)
++.. +.+.+|+|+|... .+.+.+.+... +..++....+-... +++.| ..|+|||++|..+.
T Consensus 80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~-------~~vN~~g~~~~~~~-~~~~~~~~~~g~iv~isS~~~~ 148 (267)
T 3t4x_A 80 IEKYPKVDILINNLGIFEPVEYFDIPDEDWFKL-------FEVNIMSGVRLTRS-YLKKMIERKEGRVIFIASEAAI 148 (267)
T ss_dssp HHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHTTEEEEEEECCGGGT
T ss_pred HHhcCCCCEEEECCCCCCCCccccCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHhCCCCEEEEEcchhhc
Confidence 3333 5688899998764 12344444321 22333222222223 55555 24899999996543
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=4.1e-07 Score=77.02 Aligned_cols=40 Identities=30% Similarity=0.314 Sum_probs=36.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 45 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLR 45 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 578999999987 9999999999999999999999987653
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=98.40 E-value=1e-06 Score=77.64 Aligned_cols=91 Identities=12% Similarity=0.141 Sum_probs=71.1
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCC--chhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhccc--HHH
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEID--LICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIM--VRH 137 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~--~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~--~~~ 137 (243)
..+|.|||+|.+|..+|+.|...|. +|+++|++ +.+.+.+...|... .++.++++++|+||.|+....... .+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~l 103 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQA 103 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHhh
Confidence 4689999999999999999999999 99999997 46555566677754 467788889999999987654321 234
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
.+.++++.++++.+...
T Consensus 104 ~~~l~~~~ivvd~st~~ 120 (312)
T 3qsg_A 104 GPHLCEGALYADFTSCS 120 (312)
T ss_dssp GGGCCTTCEEEECCCCC
T ss_pred HhhcCCCCEEEEcCCCC
Confidence 56788999999887553
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.40 E-value=3.8e-07 Score=78.39 Aligned_cols=42 Identities=21% Similarity=0.272 Sum_probs=37.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++|+++.++..
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 50 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAG 50 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 4689999999986 99999999999999999999999876544
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=98.40 E-value=1.2e-06 Score=76.01 Aligned_cols=89 Identities=16% Similarity=0.218 Sum_probs=69.4
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH------HH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV------RH 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~------~~ 137 (243)
.+++|+|+|.||..++..+...|.+|+++|+++.+.......|... .+..+.+.++|+|+.|+..+..+.. +.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 5799999999999999999999999999999998776555557653 3567777889999999866443221 12
Q ss_pred HccCCCCeEEEEecCC
Q 037949 138 MKQMKNAAIVCNIGHF 153 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~ 153 (243)
...++++.++++++.+
T Consensus 85 ~~~l~~~~~vv~~~~~ 100 (301)
T 3cky_A 85 LSACKAGTVIVDMSSV 100 (301)
T ss_dssp HHHSCTTCEEEECCCC
T ss_pred hhcCCCCCEEEECCCC
Confidence 3457889999987755
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.39 E-value=4.9e-07 Score=77.97 Aligned_cols=41 Identities=34% Similarity=0.353 Sum_probs=35.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
+.+|+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 67 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQE 67 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 578999999986 89999999999999999999999876544
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=98.39 E-value=1.7e-06 Score=74.30 Aligned_cols=86 Identities=15% Similarity=0.160 Sum_probs=67.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc---ccCHHhhhcCCcEEEEccCCh---hcccHHHHc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP---VLTREDVVSEAGLFVTTTENA---DIIMVRHMK 139 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~---~~~~~~~~~~aDvvi~a~G~~---~~i~~~~l~ 139 (243)
+++|+|+|.||..++..+...|.+|+++|+++.+...+...|.. ..+..+. .++|+|+.|+... .++. +...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~~-~l~~ 79 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTLE-KLIP 79 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHHH-HHGG
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHHH-HHHh
Confidence 68999999999999999999999999999999887666666653 2356666 8999999998653 2232 2345
Q ss_pred cCCCCeEEEEecCC
Q 037949 140 QMKNAAIVCNIGHF 153 (243)
Q Consensus 140 ~l~~g~~vvnvg~~ 153 (243)
.++++.+|++++..
T Consensus 80 ~~~~~~~vv~~~~~ 93 (279)
T 2f1k_A 80 HLSPTAIVTDVASV 93 (279)
T ss_dssp GSCTTCEEEECCSC
T ss_pred hCCCCCEEEECCCC
Confidence 67889999987554
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=1.1e-06 Score=76.07 Aligned_cols=88 Identities=16% Similarity=0.134 Sum_probs=67.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccHH------HH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMVR------HM 138 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~~------~l 138 (243)
++.|+|+|.+|..++..+...|.+|+++|+++.+.......|..+ .+..+.+.++|+|+.|+..+..+..- .+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~ 81 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGIL 81 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGG
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHH
Confidence 589999999999999999999999999999998876666667654 45777788899999998654333211 12
Q ss_pred ccCCCCeEEEEecCC
Q 037949 139 KQMKNAAIVCNIGHF 153 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~ 153 (243)
+.++++.++++.+..
T Consensus 82 ~~l~~~~~vv~~s~~ 96 (296)
T 2gf2_A 82 KKVKKGSLLIDSSTI 96 (296)
T ss_dssp GTCCTTCEEEECSCC
T ss_pred hcCCCCCEEEECCCC
Confidence 346788888885443
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.39 E-value=4e-07 Score=78.90 Aligned_cols=129 Identities=14% Similarity=0.148 Sum_probs=72.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEc-cCChhcccHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTT-TENADIIMVRH 137 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a-~G~~~~i~~~~ 137 (243)
.+++|+++|+|++ .||+.+|+.|...|++|+++++++.++...... +.+ .+.++. +.+ ...+..+. +.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~------l~~--~~~~~~~~~~Dv~d~~~v~-~~ 95 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADE------IVG--AGGQAIALEADVSDELQMR-NA 95 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH------HTT--TTCCEEEEECCTTCHHHHH-HH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------HHh--cCCcEEEEEccCCCHHHHH-HH
Confidence 3679999999987 899999999999999999999998765433221 000 011221 112 11221121 12
Q ss_pred HccC-----CCCeEEEEecCCC-----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCC
Q 037949 138 MKQM-----KNAAIVCNIGHFD-----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPT 204 (243)
Q Consensus 138 l~~l-----~~g~~vvnvg~~~-----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~ 204 (243)
++.+ +.+.+|+|+|... .+.+.+.+... +..++....+-... +++.|. .|+|||++|..
T Consensus 96 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~-------~~vN~~g~~~l~~~-~~~~m~~~~~g~Iv~isS~~ 167 (283)
T 3v8b_A 96 VRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDET-------IAVNLRGTFLTLHL-TVPYLKQRGGGAIVVVSSIN 167 (283)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCSB
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHHcCCceEEEEcChh
Confidence 2211 5688888888742 13444444331 22333222222222 555553 38999999975
Q ss_pred CC
Q 037949 205 GH 206 (243)
Q Consensus 205 g~ 206 (243)
|.
T Consensus 168 ~~ 169 (283)
T 3v8b_A 168 GT 169 (283)
T ss_dssp TT
T ss_pred hc
Confidence 43
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.38 E-value=2.8e-07 Score=78.62 Aligned_cols=41 Identities=24% Similarity=0.182 Sum_probs=37.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~ 47 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIAR 47 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 689999999987 99999999999999999999999876543
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.38 E-value=5.8e-07 Score=72.56 Aligned_cols=88 Identities=19% Similarity=0.239 Sum_probs=64.3
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhC-CCEEEEEeCCchhHHHHhhcCCccc--C------HHhh--hcCCcEEEEccCCh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAV-GARVMGTEIDLICALQALTEGIPVL--T------REDV--VSEAGLFVTTTENA 130 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~-Ga~V~v~d~~~~r~~~a~~~G~~~~--~------~~~~--~~~aDvvi~a~G~~ 130 (243)
+.+++++|+|+|.+|..+++.|+.. |.+|+++|+++.+...+...|+.+. + +.++ +.++|+++.|+++.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~ 116 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH 116 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence 5678999999999999999999999 9999999999998777666776532 2 1233 56799999998875
Q ss_pred hccc--HHHHccCCCCeEEEE
Q 037949 131 DIIM--VRHMKQMKNAAIVCN 149 (243)
Q Consensus 131 ~~i~--~~~l~~l~~g~~vvn 149 (243)
.... ......+.+...++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 117 QGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp HHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEE
Confidence 4311 123444554555554
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.38 E-value=4.2e-07 Score=78.60 Aligned_cols=42 Identities=33% Similarity=0.459 Sum_probs=37.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~ 68 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADA 68 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4789999999987 89999999999999999999999876544
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.37 E-value=2.3e-07 Score=79.00 Aligned_cols=43 Identities=26% Similarity=0.289 Sum_probs=37.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQA 103 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a 103 (243)
.++||+++|+|++ .||+.+|+.|...|++|+++++++.++...
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 46 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEA 46 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3679999999986 999999999999999999999998775443
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.37 E-value=1.7e-07 Score=79.52 Aligned_cols=42 Identities=31% Similarity=0.465 Sum_probs=37.4
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~ 48 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQA 48 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4689999999986 89999999999999999999999876543
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.37 E-value=4.5e-07 Score=78.09 Aligned_cols=36 Identities=31% Similarity=0.499 Sum_probs=33.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++|++
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~ 48 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDIC 48 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecc
Confidence 4789999999987 89999999999999999999984
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.36 E-value=7.4e-07 Score=77.51 Aligned_cols=131 Identities=15% Similarity=0.177 Sum_probs=75.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCC---EEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEE-Ec-cCChhccc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGA---RVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFV-TT-TENADIIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga---~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi-~a-~G~~~~i~ 134 (243)
.+.||+++|+|++ .||+.+|+.|...|+ +|+++++++.++...... +.+...+.++.+ .| ......+.
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~------l~~~~~~~~~~~~~~Dv~d~~~v~ 103 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKT------IDQEFPNAKVHVAQLDITQAEKIK 103 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHH------HHHHCTTCEEEEEECCTTCGGGHH
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHH------HHhhCCCCeEEEEECCCCCHHHHH
Confidence 3689999999987 999999999998887 999999998765433221 001001222221 12 11222232
Q ss_pred HHHHccC-----CCCeEEEEecCCC-----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeeccc
Q 037949 135 VRHMKQM-----KNAAIVCNIGHFD-----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLG 201 (243)
Q Consensus 135 ~~~l~~l-----~~g~~vvnvg~~~-----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~ 201 (243)
+.++.+ +.+.+|+|+|... .+.+.+.+... +..++....+-... +++.|. .|+|||++
T Consensus 104 -~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~-------~~vN~~g~~~l~~~-~~~~m~~~~~g~IV~is 174 (287)
T 3rku_A 104 -PFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDV-------FDTNVTALINITQA-VLPIFQAKNSGDIVNLG 174 (287)
T ss_dssp -HHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCCEEEEEC
T ss_pred -HHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHH-------HHHHHHHHHHHHHH-HHHHHHhcCCCeEEEEC
Confidence 233332 5688888998652 12344444331 22333322222223 555552 48999999
Q ss_pred CCCCC
Q 037949 202 CPTGH 206 (243)
Q Consensus 202 s~~g~ 206 (243)
|..|.
T Consensus 175 S~~~~ 179 (287)
T 3rku_A 175 SIAGR 179 (287)
T ss_dssp CGGGT
T ss_pred Chhhc
Confidence 96544
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.6e-07 Score=80.90 Aligned_cols=42 Identities=29% Similarity=0.424 Sum_probs=37.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~ 65 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQ 65 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4789999999986 99999999999999999999999876543
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.36 E-value=4.4e-07 Score=79.23 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=37.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 80 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSS 80 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 4689999999987 89999999999999999999999876543
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.36 E-value=3.5e-07 Score=78.98 Aligned_cols=42 Identities=24% Similarity=0.196 Sum_probs=34.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
++.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 63 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSA 63 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4679999999986 99999999999999999999999876543
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.36 E-value=2.9e-07 Score=79.49 Aligned_cols=41 Identities=22% Similarity=0.322 Sum_probs=37.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~ 71 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTA 71 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 4789999999987 9999999999999999999999887653
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.35 E-value=9.7e-07 Score=75.39 Aligned_cols=41 Identities=22% Similarity=0.319 Sum_probs=36.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++.
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 51 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLE 51 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3689999999977 9999999999999999999999987653
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=98.35 E-value=4.7e-07 Score=78.18 Aligned_cols=42 Identities=24% Similarity=0.247 Sum_probs=37.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 71 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQV 71 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4789999999986 99999999999999999999998876543
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.1e-06 Score=67.73 Aligned_cols=68 Identities=15% Similarity=0.165 Sum_probs=53.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-----CHH---hh-hcCCcEEEEccCCh
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-----TRE---DV-VSEAGLFVTTTENA 130 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-----~~~---~~-~~~aDvvi~a~G~~ 130 (243)
.+++++|+|+|.+|+.+++.|...|.+|+++|.++.+...+...|..+. +.+ ++ +.++|+++.++++.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDD 81 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCH
Confidence 4578999999999999999999999999999999998777666676421 221 11 35799999998864
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.1e-06 Score=75.17 Aligned_cols=90 Identities=16% Similarity=0.135 Sum_probs=68.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhc-CCcc-cCHHhhhcCCcEEEEccCChh---cccHH
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTE-GIPV-LTREDVVSEAGLFVTTTENAD---IIMVR 136 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~-G~~~-~~~~~~~~~aDvvi~a~G~~~---~i~~~ 136 (243)
.+.+++|+|+|.+|..++..+...|.+ |.++|+++.+....... |..+ .+.++.+.++|+|+.|+.... ++. +
T Consensus 9 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~-~ 87 (266)
T 3d1l_A 9 EDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQ-G 87 (266)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHHHH-H
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHHHH-H
Confidence 456899999999999999999999998 89999999876554443 6653 356677788999999986643 222 2
Q ss_pred HHccCCCCeEEEEecCC
Q 037949 137 HMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~ 153 (243)
....++++.++++++.+
T Consensus 88 l~~~~~~~~ivv~~s~~ 104 (266)
T 3d1l_A 88 IVEGKREEALMVHTAGS 104 (266)
T ss_dssp HHTTCCTTCEEEECCTT
T ss_pred HHhhcCCCcEEEECCCC
Confidence 33456789999987655
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.34 E-value=2.8e-07 Score=79.41 Aligned_cols=41 Identities=32% Similarity=0.396 Sum_probs=37.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++.
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~ 66 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAE 66 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4689999999986 9999999999999999999999987653
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=98.34 E-value=2.2e-06 Score=72.89 Aligned_cols=86 Identities=10% Similarity=0.163 Sum_probs=67.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcc-cCHHhhhcCCcEEEEccCChhcccHHHHccCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPV-LTREDVVSEAGLFVTTTENADIIMVRHMKQMK 142 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~ 142 (243)
.+++|+|+|.+|..++..+...|.+|.++|+++.+...... .|+.+ .+..+.+.++|+|+.|+. +... .+.+..++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~-~~v~~~l~ 81 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-ETVLKPLH 81 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-HHHHTTSC
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhH-HHHHHHhc
Confidence 47999999999999999999999999999999887655443 37654 356777889999999987 3434 34677777
Q ss_pred CCeEEEEecC
Q 037949 143 NAAIVCNIGH 152 (243)
Q Consensus 143 ~g~~vvnvg~ 152 (243)
++.++++...
T Consensus 82 ~~~~vv~~~~ 91 (259)
T 2ahr_A 82 FKQPIISMAA 91 (259)
T ss_dssp CCSCEEECCT
T ss_pred cCCEEEEeCC
Confidence 8888887643
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.34 E-value=6.5e-07 Score=78.07 Aligned_cols=36 Identities=28% Similarity=0.461 Sum_probs=33.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++|++
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 4689999999987 99999999999999999999987
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.34 E-value=9.4e-07 Score=75.68 Aligned_cols=42 Identities=29% Similarity=0.304 Sum_probs=37.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 59 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDA 59 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4689999999986 99999999999999999999999876543
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.33 E-value=2.4e-07 Score=80.26 Aligned_cols=41 Identities=29% Similarity=0.390 Sum_probs=37.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 47 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAE 47 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 679999999986 89999999999999999999999876543
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.33 E-value=7e-07 Score=80.02 Aligned_cols=89 Identities=18% Similarity=0.171 Sum_probs=69.7
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhc----CCcEEEEccCChh---cccH
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVS----EAGLFVTTTENAD---IIMV 135 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~----~aDvvi~a~G~~~---~i~~ 135 (243)
-++++|||+|.||..+|+.++..|.+|+++|+++.++..+...|+.. .++.+.+. ++|+|+.|+.... ++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl~- 86 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLD- 86 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHHH-
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHHH-
Confidence 36799999999999999999999999999999998887787888753 45655554 5799999986432 221
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
.+..++++.+|++++...
T Consensus 87 -~l~~~~~~~iv~Dv~Svk 104 (341)
T 3ktd_A 87 -AVHTHAPNNGFTDVVSVK 104 (341)
T ss_dssp -HHHHHCTTCCEEECCSCS
T ss_pred -HHHccCCCCEEEEcCCCC
Confidence 244458899999987654
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=2.3e-07 Score=78.65 Aligned_cols=42 Identities=36% Similarity=0.450 Sum_probs=37.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~ 45 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKA 45 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 3689999999986 89999999999999999999999876544
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.33 E-value=5.7e-07 Score=77.37 Aligned_cols=36 Identities=28% Similarity=0.509 Sum_probs=33.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++|++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~ 44 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIA 44 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEecc
Confidence 3689999999987 99999999999999999999984
|
| >2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} | Back alignment and structure |
|---|
Probab=98.33 E-value=2.6e-06 Score=77.44 Aligned_cols=122 Identities=16% Similarity=0.094 Sum_probs=89.2
Q ss_pred hhccccchhhhhh---hhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCc----hh---H-----HHHhhc
Q 037949 43 LYGFRHSLPDGLM---RATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDL----IC---A-----LQALTE 106 (243)
Q Consensus 43 ~~~~~~~~~~av~---~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~----~r---~-----~~a~~~ 106 (243)
..|++.....++. +..+..++..+|+|+|+|..|.++|+.+..+|+ +|+++|++. .| + ..+...
T Consensus 164 iqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~ 243 (398)
T 2a9f_A 164 QHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVT 243 (398)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhcc
Confidence 3444444343432 223445788899999999999999999999999 999999874 11 1 111111
Q ss_pred C-C-cccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHh
Q 037949 107 G-I-PVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAY 165 (243)
Q Consensus 107 G-~-~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~ 165 (243)
. . ...++.++++++|++|-+++ +.+++.+.++.|+++.+|...+-...|+..+....|
T Consensus 244 ~~~~~~~~L~eav~~ADV~IG~Sa-pgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe~a~~~ 303 (398)
T 2a9f_A 244 NREFKSGTLEDALEGADIFIGVSA-PGVLKAEWISKMAARPVIFAMANPIPEIYPDEALEA 303 (398)
T ss_dssp SCTTCCCSCSHHHHTTCSEEECCS-TTCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHTT
T ss_pred CcccchhhHHHHhccCCEEEecCC-CCCCCHHHHHhhCCCCEEEECCCCCccCCHHHHHHh
Confidence 1 0 12346788899999999976 899999999999999999998887667887776654
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.32 E-value=1e-06 Score=76.20 Aligned_cols=39 Identities=23% Similarity=0.194 Sum_probs=35.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.+
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~ 45 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEP 45 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhh
Confidence 4689999999987 99999999999999999999998763
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.32 E-value=3.5e-07 Score=78.70 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=35.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.+
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~ 42 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVA 42 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSC
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchh
Confidence 4689999999987 99999999999999999999998754
|
| >3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I* | Back alignment and structure |
|---|
Probab=98.32 E-value=1.2e-06 Score=81.63 Aligned_cols=88 Identities=20% Similarity=0.093 Sum_probs=69.8
Q ss_pred cccC-cEEEEEcCChHHHHHHHHHHhC------CCEEEEEeCCc-hhHHHHhhcCCcc-----cCHHhhhcCCcEEEEcc
Q 037949 61 TIAG-KIAVDCGHGDVGRGCAAALKAV------GARVMGTEIDL-ICALQALTEGIPV-----LTREDVVSEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g-~~vlViG~G~IG~~~A~~l~~~------Ga~V~v~d~~~-~r~~~a~~~G~~~-----~~~~~~~~~aDvvi~a~ 127 (243)
.++| ++|+|||+|.||.++|+.|+.. |.+|++.+++. .....+...|+.+ .+..++++++|+|+.++
T Consensus 50 ~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaV 129 (525)
T 3fr7_A 50 AFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLI 129 (525)
T ss_dssp HTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECS
T ss_pred HhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECC
Confidence 4789 9999999999999999999998 99998876653 3455677788764 46788899999999997
Q ss_pred CCh---hcccHHHHccCCCCeEEEE
Q 037949 128 ENA---DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 128 G~~---~~i~~~~l~~l~~g~~vvn 149 (243)
... .++. +....|++|.++..
T Consensus 130 P~~~~~eVl~-eI~p~LK~GaILs~ 153 (525)
T 3fr7_A 130 SDAAQADNYE-KIFSHMKPNSILGL 153 (525)
T ss_dssp CHHHHHHHHH-HHHHHSCTTCEEEE
T ss_pred ChHHHHHHHH-HHHHhcCCCCeEEE
Confidence 643 3454 56788999988644
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.4e-06 Score=67.53 Aligned_cols=86 Identities=15% Similarity=0.077 Sum_probs=62.6
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C---H---Hh-hhcCCcEEEEccCChhcc-
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T---R---ED-VVSEAGLFVTTTENADII- 133 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~---~---~~-~~~~aDvvi~a~G~~~~i- 133 (243)
.++++|+|+|.+|..+++.|+..|.+|+++|.++.+...+...|+.++ + . .+ .+.++|+++.++++...-
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 467999999999999999999999999999999998877777776532 2 1 11 146899999998875421
Q ss_pred -cHHHHccCCCCeEEEE
Q 037949 134 -MVRHMKQMKNAAIVCN 149 (243)
Q Consensus 134 -~~~~l~~l~~g~~vvn 149 (243)
-......+.++..++.
T Consensus 87 ~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 87 EIVASARAKNPDIEIIA 103 (140)
T ss_dssp HHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHCCCCeEEE
Confidence 1123444455555554
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.7e-06 Score=74.81 Aligned_cols=87 Identities=16% Similarity=0.074 Sum_probs=67.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccHHHH-----
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMVRHM----- 138 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~~~l----- 138 (243)
.+++|+|+|.||..++..+...|.+|+++| ++.+.......|... .+..+.+.++|+|+.|++.+..+. +.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~-~v~~~~~~ 81 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVE-DVLFGEHG 81 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHH-HHHHSTTS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHH-HHHhCchh
Confidence 479999999999999999999999999999 887765555556653 457777889999999987654332 223
Q ss_pred --ccCCCCeEEEEecCC
Q 037949 139 --KQMKNAAIVCNIGHF 153 (243)
Q Consensus 139 --~~l~~g~~vvnvg~~ 153 (243)
..++++.+|++.+..
T Consensus 82 l~~~l~~~~~vv~~s~~ 98 (295)
T 1yb4_A 82 CAKTSLQGKTIVDMSSI 98 (295)
T ss_dssp STTSCCTTEEEEECSCC
T ss_pred HhhcCCCCCEEEECCCC
Confidence 356789999987765
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.32 E-value=6.2e-07 Score=77.18 Aligned_cols=37 Identities=30% Similarity=0.334 Sum_probs=33.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++|+++
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~ 44 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCE 44 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence 3689999999976 899999999999999999999873
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.32 E-value=3.7e-07 Score=77.60 Aligned_cols=41 Identities=17% Similarity=0.335 Sum_probs=35.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.+..
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 45 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE 45 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence 3689999999986 9999999999999999999999887653
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.32 E-value=4.7e-07 Score=77.77 Aligned_cols=42 Identities=21% Similarity=0.166 Sum_probs=37.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~ 66 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKE 66 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4689999999986 89999999999999999999999876543
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.31 E-value=3.6e-07 Score=78.52 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=35.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.+|+++|+|++ .||+.+|+.|...|++|+++++++.++
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 53 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL 53 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 578999999986 999999999999999999999988765
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.31 E-value=7.3e-07 Score=75.98 Aligned_cols=42 Identities=19% Similarity=0.188 Sum_probs=37.5
Q ss_pred cccCcEEEEEcC-C-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGH-G-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~-G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|+ | +||+.+++.|...|++|+++++++.++..
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~ 62 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGE 62 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHH
Confidence 368999999999 7 79999999999999999999999876543
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.31 E-value=7.2e-07 Score=76.57 Aligned_cols=36 Identities=31% Similarity=0.483 Sum_probs=33.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++|++
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence 4789999999986 89999999999999999999987
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=4.4e-07 Score=77.45 Aligned_cols=127 Identities=15% Similarity=0.157 Sum_probs=70.5
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-eCCchhHHHHhhcCCcccCHHhhhcCCcEEE-Ec-cCChhcccHHHH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGT-EIDLICALQALTEGIPVLTREDVVSEAGLFV-TT-TENADIIMVRHM 138 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi-~a-~G~~~~i~~~~l 138 (243)
.||+++|+|++ .||+.+++.|...|++|++. ++++.++...... ..+ .+.++.+ .+ ......+. +.+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~------~~~--~~~~~~~~~~Dv~~~~~v~-~~~ 73 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEE------IEK--LGVKVLVVKANVGQPAKIK-EMF 73 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH------HHT--TTCCEEEEECCTTCHHHHH-HHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH------HHh--cCCcEEEEEcCCCCHHHHH-HHH
Confidence 68999999986 99999999999999999886 7777654332210 000 0112221 11 11222221 122
Q ss_pred ccC-----CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCCCC
Q 037949 139 KQM-----KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPTGH 206 (243)
Q Consensus 139 ~~l-----~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~g~ 206 (243)
+.+ +.+.+|+|+|... .+.+.+.+... +..++....+-... ++..|. .|+|||++|..+.
T Consensus 74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~-------~~vN~~g~~~~~~~-~~~~m~~~~~g~iv~isS~~~~ 145 (258)
T 3oid_A 74 QQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWT-------MNINAKALLFCAQE-AAKLMEKNGGGHIVSISSLGSI 145 (258)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHTTTCEEEEEEEEGGGT
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHhcCCcEEEEECchhhC
Confidence 221 5688888888653 12444444331 22333222222223 556653 3799999997644
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=9.9e-07 Score=76.80 Aligned_cols=38 Identities=24% Similarity=0.221 Sum_probs=34.2
Q ss_pred cccCcEEEEEcCC-h--HHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-D--VGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~--IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.+.||+++|+|++ . ||+.+|+.|...|++|+++++++.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~ 68 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA 68 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4789999999985 4 999999999999999999999864
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.29 E-value=5.1e-07 Score=77.31 Aligned_cols=40 Identities=25% Similarity=0.249 Sum_probs=34.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.+.
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 64 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS 64 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence 4789999999986 899999999999999999999988754
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.29 E-value=7.6e-07 Score=77.75 Aligned_cols=41 Identities=27% Similarity=0.380 Sum_probs=37.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~ 70 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQ 70 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 689999999986 89999999999999999999999877543
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.9e-06 Score=73.12 Aligned_cols=90 Identities=28% Similarity=0.265 Sum_probs=64.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh--------------HHHHh-hcCC-cccCHHhhhcCCcEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC--------------ALQAL-TEGI-PVLTREDVVSEAGLFV 124 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r--------------~~~a~-~~G~-~~~~~~~~~~~aDvvi 124 (243)
.+.++++.|+|+|.+|..+|+.|...|.+|+++|+++.+ ..... ..+. ...+..++++++|+|+
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvVi 95 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELVV 95 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEEE
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEEE
Confidence 467899999999999999999999999999999999886 22222 2232 2345677888999999
Q ss_pred EccCChhccc--HHH-HccCCCCeEEEEec
Q 037949 125 TTTENADIIM--VRH-MKQMKNAAIVCNIG 151 (243)
Q Consensus 125 ~a~G~~~~i~--~~~-l~~l~~g~~vvnvg 151 (243)
.|+....... .+. ...+ ++.++++++
T Consensus 96 lavp~~~~~~~~~~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 96 NATEGASSIAALTAAGAENL-AGKILVDIA 124 (245)
T ss_dssp ECSCGGGHHHHHHHHCHHHH-TTSEEEECC
T ss_pred EccCcHHHHHHHHHhhhhhc-CCCEEEECC
Confidence 9986543321 111 1223 788999887
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=98.29 E-value=1.9e-06 Score=74.58 Aligned_cols=88 Identities=18% Similarity=0.155 Sum_probs=67.2
Q ss_pred cEEEEEcCChHHHHHHHHHHhC--CCEEEEEeCCchhHHHHhhcCCc---ccCHHhhhcCCcEEEEccCChh---cccHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAV--GARVMGTEIDLICALQALTEGIP---VLTREDVVSEAGLFVTTTENAD---IIMVR 136 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~--Ga~V~v~d~~~~r~~~a~~~G~~---~~~~~~~~~~aDvvi~a~G~~~---~i~~~ 136 (243)
.+++|+|+|.||..++..+... |.+|+++|+++.+...+...|.. ..+..+.+.++|+|+.|+.... ++. +
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~-~ 85 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFIK-I 85 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHHHHHHH-H
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHHHHHHH-H
Confidence 6899999999999999999877 57999999999887666666652 2355667789999999986543 232 2
Q ss_pred HHcc-CCCCeEEEEecCC
Q 037949 137 HMKQ-MKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l~~-l~~g~~vvnvg~~ 153 (243)
.... ++++.++++++..
T Consensus 86 l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 86 LADLDLKEDVIITDAGST 103 (290)
T ss_dssp HHTSCCCTTCEEECCCSC
T ss_pred HHhcCCCCCCEEEECCCC
Confidence 3455 7888999887654
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=1.9e-06 Score=65.79 Aligned_cols=69 Identities=13% Similarity=0.161 Sum_probs=52.0
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-----CHH---hh-hcCCcEEEEccCCh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-----TRE---DV-VSEAGLFVTTTENA 130 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-----~~~---~~-~~~aDvvi~a~G~~ 130 (243)
+++++++|+|+|.+|+.+++.|+..|++|+++|+++.+.......+..+. +.+ +. +.++|+++.|++..
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 45788999999999999999999999999999999887654444454321 222 22 46799999998864
|
| >2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.28 E-value=3.5e-06 Score=74.28 Aligned_cols=90 Identities=13% Similarity=0.047 Sum_probs=69.0
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhC-CC-EEEEEeCCchhHHHHhh-cC--Cc-ccCHHhhhcCCcEEEEccCCh-hccc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAV-GA-RVMGTEIDLICALQALT-EG--IP-VLTREDVVSEAGLFVTTTENA-DIIM 134 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~-Ga-~V~v~d~~~~r~~~a~~-~G--~~-~~~~~~~~~~aDvvi~a~G~~-~~i~ 134 (243)
...++++|||+|.+|..++..+... |. +|.++|+++.+.+...+ .+ +. +.++++++.++|+|+.|+... +++.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~~~v~~ 212 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLATEPILF 212 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCSSCCBC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCCCcccC
Confidence 3578999999999999999998764 87 89999999987654433 35 44 345778888999999998653 3343
Q ss_pred HHHHccCCCCeEEEEecCCC
Q 037949 135 VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~ 154 (243)
. +.+++|..|+++|...
T Consensus 213 ~---~~l~~g~~vi~~g~~~ 229 (312)
T 2i99_A 213 G---EWVKPGAHINAVGASR 229 (312)
T ss_dssp G---GGSCTTCEEEECCCCS
T ss_pred H---HHcCCCcEEEeCCCCC
Confidence 2 5689999999987653
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.28 E-value=1.5e-06 Score=75.06 Aligned_cols=37 Identities=24% Similarity=0.303 Sum_probs=33.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.+|+++|+|++ .||+.+|+.|...|++|++++++.
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~ 59 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGA 59 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4679999999986 999999999999999999999843
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.28 E-value=3.3e-07 Score=78.99 Aligned_cols=42 Identities=29% Similarity=0.322 Sum_probs=37.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 50 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAG 50 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4689999999987 99999999999999999999999876543
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=9.2e-07 Score=76.18 Aligned_cols=42 Identities=21% Similarity=0.227 Sum_probs=37.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.+...
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~ 66 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLT 66 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4789999999987 89999999999999999999999876533
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=98.27 E-value=2e-06 Score=74.96 Aligned_cols=100 Identities=13% Similarity=0.126 Sum_probs=69.5
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-cC----CcccCHHhhhcCCcEEE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-EG----IPVLTREDVVSEAGLFV 124 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~G----~~~~~~~~~~~~aDvvi 124 (243)
+.++.+. +..+.|++++|+|+|++|+.++..|...|+ +|+++++++.+...... .+ ..+.+.++...++|+||
T Consensus 114 ~~~L~~~-~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiII 192 (281)
T 3o8q_A 114 VQDLLAQ-QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVII 192 (281)
T ss_dssp HHHHHHT-TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEE
T ss_pred HHHHHHh-CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEE
Confidence 4444332 335789999999999999999999999997 99999999887543322 12 22334445446899999
Q ss_pred EccCCh-----hcccHHHHccCCCCeEEEEecCCC
Q 037949 125 TTTENA-----DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 125 ~a~G~~-----~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+||+.. ..+. .+.++++.+|+.+...+
T Consensus 193 naTp~gm~~~~~~l~---~~~l~~~~~V~DlvY~P 224 (281)
T 3o8q_A 193 NSTSASLDGELPAID---PVIFSSRSVCYDMMYGK 224 (281)
T ss_dssp ECSCCCC----CSCC---GGGEEEEEEEEESCCCS
T ss_pred EcCcCCCCCCCCCCC---HHHhCcCCEEEEecCCC
Confidence 998542 1232 23457788888876653
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.2e-06 Score=74.53 Aligned_cols=41 Identities=24% Similarity=0.267 Sum_probs=36.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.++..
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 44 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAA 44 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 578999999985 99999999999999999999999876543
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.7e-06 Score=74.76 Aligned_cols=100 Identities=11% Similarity=0.081 Sum_probs=64.3
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcC----CcccCHHhhhc-CCcEE
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEG----IPVLTREDVVS-EAGLF 123 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G----~~~~~~~~~~~-~aDvv 123 (243)
++.++.+. +..+.+++++|+|+|++|+.++..|...|++|++++++++++.... ..+ ..+.+.++... ++|++
T Consensus 106 ~~~~L~~~-~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~Div 184 (272)
T 1p77_A 106 LVTDLQRL-NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLV 184 (272)
T ss_dssp HHHHHHHT-TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEE
T ss_pred HHHHHHHh-CCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEE
Confidence 34444432 3356899999999999999999999999999999999987753332 111 12223333323 79999
Q ss_pred EEccCChhc-----ccHHHHccCCCCeEEEEecCC
Q 037949 124 VTTTENADI-----IMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 124 i~a~G~~~~-----i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|.|++.... +..+ .++++.+++++...
T Consensus 185 In~t~~~~~~~~~~i~~~---~l~~~~~v~D~~y~ 216 (272)
T 1p77_A 185 INATSAGLSGGTASVDAE---ILKLGSAFYDMQYA 216 (272)
T ss_dssp EECCCC-------CCCHH---HHHHCSCEEESCCC
T ss_pred EECCCCCCCCCCCCCCHH---HcCCCCEEEEeeCC
Confidence 999875432 2211 22445666666554
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.27 E-value=6.1e-07 Score=77.13 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=34.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+|+|+|++ .||+.+|+.|...|++|+++++++..
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~ 50 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKS 50 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 5789999999987 89999999999999999999998764
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=1.6e-06 Score=75.55 Aligned_cols=103 Identities=15% Similarity=0.108 Sum_probs=69.8
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcccC---HHhhhcCCcEEEE
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVLT---REDVVSEAGLFVT 125 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~~---~~~~~~~aDvvi~ 125 (243)
++.++.+. +..+.|++++|+|+|++|++++..|...|+ +|+++++++.+..... ....... +.+.+.++|+||+
T Consensus 104 ~~~~L~~~-~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la-~~~~~~~~~~~~~~~~~aDiVIn 181 (277)
T 3don_A 104 YVNGLKQI-YEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWS-LNINKINLSHAESHLDEFDIIIN 181 (277)
T ss_dssp HHHHHHHH-STTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC-SCCEEECHHHHHHTGGGCSEEEE
T ss_pred HHHHHHHh-CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-HhcccccHhhHHHHhcCCCEEEE
Confidence 34444432 335789999999999999999999999999 8999999988753222 2232223 3445678999999
Q ss_pred ccCCh--hcccH-HHHccCCCCeEEEEecCCC
Q 037949 126 TTENA--DIIMV-RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 126 a~G~~--~~i~~-~~l~~l~~g~~vvnvg~~~ 154 (243)
||+.. +.... -..+.++++.+|+.+...+
T Consensus 182 aTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P 213 (277)
T 3don_A 182 TTPAGMNGNTDSVISLNRLASHTLVSDIVYNP 213 (277)
T ss_dssp CCC-------CCSSCCTTCCSSCEEEESCCSS
T ss_pred CccCCCCCCCcCCCCHHHcCCCCEEEEecCCC
Confidence 97531 11100 0145578899999887654
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.26 E-value=1.1e-06 Score=73.85 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=37.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.++||+++|+|++ .||+.+++.|...|++|+++++++.++..
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 53 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAE 53 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHH
Confidence 4789999999986 99999999999999999999999876543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=9.4e-07 Score=76.24 Aligned_cols=37 Identities=30% Similarity=0.450 Sum_probs=34.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++|+++
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~ 45 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICK 45 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccc
Confidence 3689999999987 899999999999999999999873
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.6e-06 Score=75.17 Aligned_cols=90 Identities=16% Similarity=0.042 Sum_probs=65.8
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCCh----hcccHHHHc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENA----DIIMVRHMK 139 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~----~~i~~~~l~ 139 (243)
+++++|+|+|++|++++..|...|.+|+++++++++.......+....+.++. .++|+||+||+.. ..+..+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPK-SAFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCS-SCCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHh-ccCCEEEEcccCCCCCCCCCChHHHH
Confidence 89999999999999999999999999999999998764433556544444333 3899999997532 124433222
Q ss_pred -cCCCCeEEEEecCCC
Q 037949 140 -QMKNAAIVCNIGHFD 154 (243)
Q Consensus 140 -~l~~g~~vvnvg~~~ 154 (243)
.++++.+|+++...+
T Consensus 197 ~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF 212 (269)
T ss_dssp HHHHHCSEEEESCCSS
T ss_pred hhCCCCCEEEEeCCCC
Confidence 456788888877653
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.8e-06 Score=74.59 Aligned_cols=40 Identities=33% Similarity=0.309 Sum_probs=34.4
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC-CchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEI-DLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~-~~~r~ 100 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++ ++.++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~ 67 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGV 67 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence 3679999999986 8999999999999999999986 54433
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.25 E-value=9.8e-07 Score=77.68 Aligned_cols=36 Identities=28% Similarity=0.421 Sum_probs=33.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++|++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecc
Confidence 3689999999987 99999999999999999999886
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.4e-06 Score=74.14 Aligned_cols=41 Identities=24% Similarity=0.290 Sum_probs=36.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (263)
T 3ai3_A 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLH 45 (263)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 3679999999986 9999999999999999999999987643
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.5e-06 Score=74.21 Aligned_cols=40 Identities=28% Similarity=0.297 Sum_probs=36.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGK 45 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999976 9999999999999999999999987653
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.6e-06 Score=74.22 Aligned_cols=41 Identities=17% Similarity=0.304 Sum_probs=36.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.++..
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 45 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAE 45 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 578999999986 99999999999999999999999876543
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.6e-06 Score=73.93 Aligned_cols=42 Identities=31% Similarity=0.420 Sum_probs=37.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.|++++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~ 68 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRA 68 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 3689999999975 99999999999999999999999876543
|
| >3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=1.1e-05 Score=74.31 Aligned_cols=89 Identities=21% Similarity=0.238 Sum_probs=73.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc------hhHHHHhhcCCcccCHHhhhcCCcEEEEccCC---hh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL------ICALQALTEGIPVLTREDVVSEAGLFVTTTEN---AD 131 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~------~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~---~~ 131 (243)
.++||+|+|||||.-|.+-|+.||..|.+|+|.-+.. .....|..+|+.+.+..++++.||+|+..+.. +.
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~q~~ 113 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSD 113 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGGHHH
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhhHHH
Confidence 4899999999999999999999999999999875421 23457888999999999999999999887643 23
Q ss_pred cccHHHHccCCCCeEEEEe
Q 037949 132 IIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnv 150 (243)
+.+ +....|++|..+...
T Consensus 114 vy~-~I~p~lk~G~~L~fa 131 (491)
T 3ulk_A 114 VVR-TVQPLMKDGAALGYS 131 (491)
T ss_dssp HHH-HHGGGSCTTCEEEES
T ss_pred HHH-HHHhhCCCCCEEEec
Confidence 443 467889999998864
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.24 E-value=2.5e-06 Score=72.36 Aligned_cols=42 Identities=31% Similarity=0.438 Sum_probs=37.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~ 48 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAER 48 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 4689999999987 89999999999999999999999887644
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.2e-06 Score=73.93 Aligned_cols=42 Identities=29% Similarity=0.426 Sum_probs=37.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~ 48 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEA 48 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 4689999999986 99999999999999999999999876543
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.23 E-value=2.7e-06 Score=72.37 Aligned_cols=41 Identities=29% Similarity=0.482 Sum_probs=36.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 50 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQ 50 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3679999999987 8999999999999999999999987653
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.7e-06 Score=74.52 Aligned_cols=38 Identities=32% Similarity=0.408 Sum_probs=34.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 66 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG 66 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH
Confidence 4789999999987 9999999999999999999996643
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=1.2e-06 Score=75.23 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=34.1
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+.||+++|+|+ |.||+.+|+.|...|++|+++++++.
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 43 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57899999998 59999999999999999999999875
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.22 E-value=2.6e-07 Score=79.43 Aligned_cols=39 Identities=31% Similarity=0.464 Sum_probs=35.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+++|+|++ .||+.+|+.|...|++|++++++...
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~ 64 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAG 64 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3689999999987 89999999999999999999988764
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.22 E-value=2.8e-06 Score=73.94 Aligned_cols=91 Identities=12% Similarity=0.096 Sum_probs=64.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cC----------CcccCHHhhhcCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EG----------IPVLTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G----------~~~~~~~~~~~~aDvvi~a~G~ 129 (243)
.+.|++++|+|+|.||+.++..|...| +|+++++++.++..... .+ .++.+..+.+.++|++|.++|.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 203 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCC
Confidence 568999999999999999999999999 99999999876533221 11 1122223445689999999875
Q ss_pred hhc-------ccHHHHccCCCCeEEEEecCCC
Q 037949 130 ADI-------IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 130 ~~~-------i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
... +. ..+.++++.+++++...+
T Consensus 204 ~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p 233 (287)
T 1nvt_A 204 GMYPNIDVEPIV--KAEKLREDMVVMDLIYNP 233 (287)
T ss_dssp TCTTCCSSCCSS--CSTTCCSSSEEEECCCSS
T ss_pred CCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC
Confidence 321 20 134567888899887643
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.22 E-value=2.6e-06 Score=73.42 Aligned_cols=37 Identities=24% Similarity=0.233 Sum_probs=34.1
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+.||+++|+|+ |.||+.+++.|...|++|+++++++.
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~ 58 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK 58 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 67999999998 59999999999999999999999874
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.22 E-value=2.6e-06 Score=84.24 Aligned_cols=90 Identities=13% Similarity=0.154 Sum_probs=68.9
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh------cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV------SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~------~~aDvvi~a~ 127 (243)
..+|++|+|.|+ |+||+.+++.++..|++|++++.++ +.. ....|.+ +++ +.+.+ +++|+|++++
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~-~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~ 420 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQ-AVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSL 420 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGG-GSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhh-hhhcChhheeecCChhHHHHHHHHcCCCCeEEEEECC
Confidence 468999999996 9999999999999999999988665 332 2235654 222 22222 3799999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|. ..+. +.++.++++|+++.+|..+
T Consensus 421 gg-~~~~-~~l~~l~~~Gr~v~iG~~~ 445 (795)
T 3slk_A 421 AG-EFAD-ASLRMLPRGGRFLELGKTD 445 (795)
T ss_dssp CT-TTTH-HHHTSCTTCEEEEECCSTT
T ss_pred Cc-HHHH-HHHHHhcCCCEEEEecccc
Confidence 76 4454 5899999999999999764
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.21 E-value=2.4e-06 Score=73.25 Aligned_cols=41 Identities=27% Similarity=0.375 Sum_probs=37.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 59 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEAS 59 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 5789999999986 9999999999999999999999987653
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.21 E-value=9.1e-06 Score=70.51 Aligned_cols=93 Identities=14% Similarity=0.147 Sum_probs=66.6
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-hcC---CcccCHHhhh-cCCcEEEEccCCh--
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-TEG---IPVLTREDVV-SEAGLFVTTTENA-- 130 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~~G---~~~~~~~~~~-~~aDvvi~a~G~~-- 130 (243)
+..+.|++++|+|+|++|++++..|...|+ +|+++++++.+..... ..+ ..+.+.++.. .++|+||+||+..
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~ 194 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLT 194 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCC
Confidence 345789999999999999999999999997 9999999988754432 222 2233334432 6899999998542
Q ss_pred ---hcccHHHHccCCCCeEEEEecCCC
Q 037949 131 ---DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 131 ---~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
..+. .+.++++.+|+.+-..+
T Consensus 195 ~~~~~i~---~~~l~~~~~V~DlvY~P 218 (272)
T 3pwz_A 195 ADLPPLP---ADVLGEAALAYELAYGK 218 (272)
T ss_dssp TCCCCCC---GGGGTTCSEEEESSCSC
T ss_pred CCCCCCC---HHHhCcCCEEEEeecCC
Confidence 1232 24567888888876654
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=6.3e-07 Score=77.04 Aligned_cols=37 Identities=30% Similarity=0.407 Sum_probs=33.4
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.||+++|+|++ .||+.+|+.|...|++|++.+++.
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~ 62 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASS 62 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4789999999986 899999999999999999998843
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.2e-06 Score=73.79 Aligned_cols=38 Identities=32% Similarity=0.360 Sum_probs=33.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.+.||+++|+|++ .||+.+|+.|...|++|++++.+..
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~ 66 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA 66 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 4789999999987 8999999999999999999876653
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.9e-06 Score=75.89 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=35.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.+
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~ 81 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhh
Confidence 4789999999986 99999999999999999999998764
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=9.7e-06 Score=70.70 Aligned_cols=85 Identities=19% Similarity=0.130 Sum_probs=60.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-----------hcCC------------------c-ccCHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-----------TEGI------------------P-VLTRE 114 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-----------~~G~------------------~-~~~~~ 114 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++.+++.+. ..|. . ..++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999999999999999988765432 1231 1 23455
Q ss_pred hhhcCCcEEEEccCChh----cccHHHHccCCCCeEEEE
Q 037949 115 DVVSEAGLFVTTTENAD----IIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 115 ~~~~~aDvvi~a~G~~~----~i~~~~l~~l~~g~~vvn 149 (243)
+.+.++|+||+|+.... .+-.+.-..++++.+++.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s 134 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEE
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEE
Confidence 57789999999986532 111222234677887764
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.20 E-value=7.6e-07 Score=74.94 Aligned_cols=40 Identities=33% Similarity=0.400 Sum_probs=36.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~ 43 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAE 43 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 9999999999999999999999987653
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.20 E-value=2.2e-06 Score=73.29 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=34.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 44 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG 44 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 678999999986 99999999999999999999988753
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=1.6e-06 Score=74.66 Aligned_cols=40 Identities=20% Similarity=0.116 Sum_probs=36.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 60 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLR 60 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 678999999987 9999999999999999999999987653
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.19 E-value=1.8e-06 Score=73.92 Aligned_cols=127 Identities=17% Similarity=0.209 Sum_probs=70.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcCCcccCHHhhhcCCcEEE-Ec-cCChhcccHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEGIPVLTREDVVSEAGLFV-TT-TENADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~~~~~~~~~~~aDvvi-~a-~G~~~~i~~~ 136 (243)
.+.||+++|+|++ .||+.+|+.|...|++|++++.+... +...... ..+ .+.++.+ .+ ......+. +
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~Dv~~~~~v~-~ 85 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSE------IKA--LGSDAIAIKADIRQVPEIV-K 85 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH------HHH--TTCCEEEEECCTTSHHHHH-H
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH------HHh--cCCcEEEEEcCCCCHHHHH-H
Confidence 4789999999987 99999999999999999998775433 2211110 000 0122221 12 11222121 1
Q ss_pred HHccC-----CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh-hcCCeecccCCC
Q 037949 137 HMKQM-----KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL-AERLLMNLGCPT 204 (243)
Q Consensus 137 ~l~~l-----~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll-~~G~ivNl~s~~ 204 (243)
.++.+ +.+.+|+|+|... .+.+.+.+... +..++....+-... +++.| ..|+|||++|..
T Consensus 86 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~-------~~~N~~g~~~~~~~-~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 86 LFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRV-------FSLNTRGQFFVARE-AYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHCCTTCEEEEECCTT
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHhcCCeEEEEeCch
Confidence 22211 5688888888763 12344444331 22333222222223 55555 468999999965
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.19 E-value=4.4e-06 Score=70.83 Aligned_cols=86 Identities=16% Similarity=0.263 Sum_probs=63.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC----EEEEEeCCchhHHHHhh-cCCcc-cCHHhhhcCCcEEEEccCChhccc---H
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA----RVMGTEIDLICALQALT-EGIPV-LTREDVVSEAGLFVTTTENADIIM---V 135 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga----~V~v~d~~~~r~~~a~~-~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~---~ 135 (243)
+++.|||+|.+|..+++.+...|. +|+++|++++++..... .|... .+..+.+.++|+|+.|+. +..+. .
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~-~~~~~~v~~ 81 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIK-PDLYASIIN 81 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSC-TTTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeC-HHHHHHHHH
Confidence 579999999999999999999998 99999999988765543 47654 467778889999999983 32221 1
Q ss_pred HHHccCCCCeEEEEec
Q 037949 136 RHMKQMKNAAIVCNIG 151 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg 151 (243)
+....++++.++++..
T Consensus 82 ~l~~~l~~~~~vvs~~ 97 (247)
T 3gt0_A 82 EIKEIIKNDAIIVTIA 97 (247)
T ss_dssp --CCSSCTTCEEEECS
T ss_pred HHHhhcCCCCEEEEec
Confidence 2223456787777543
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.19 E-value=1.7e-06 Score=72.92 Aligned_cols=42 Identities=19% Similarity=0.275 Sum_probs=37.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
..++|+++|+|++ .||+.+++.|...|++|+++++++.++..
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~ 53 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKS 53 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 5789999999986 99999999999999999999999876543
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=1.9e-06 Score=74.42 Aligned_cols=41 Identities=24% Similarity=0.304 Sum_probs=37.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 44 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRE 44 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHH
Confidence 679999999987 89999999999999999999999876543
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.19 E-value=7.3e-07 Score=76.08 Aligned_cols=40 Identities=33% Similarity=0.444 Sum_probs=34.4
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-eCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGT-EIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d~~~~r~ 100 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++ ++++.+.
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~ 46 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGA 46 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence 3689999999987 89999999999999999988 5555543
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=2.3e-06 Score=74.26 Aligned_cols=39 Identities=23% Similarity=0.296 Sum_probs=35.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.++||+++|+|++ .||+.+|+.|...|++|+++++++..
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~ 83 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEG 83 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 4689999999986 99999999999999999999998764
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.18 E-value=2.7e-06 Score=73.00 Aligned_cols=41 Identities=22% Similarity=0.262 Sum_probs=36.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 59 (273)
T 1ae1_A 18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD 59 (273)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4689999999986 9999999999999999999999987653
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=3.3e-06 Score=71.89 Aligned_cols=39 Identities=26% Similarity=0.305 Sum_probs=34.5
Q ss_pred cccCcEEEEEcCC-h--HHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-D--VGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~--IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+++|+|++ . ||+.+|+.|...|++|+++++++..
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~ 45 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL 45 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH
Confidence 4689999999985 4 9999999999999999999988653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.18 E-value=9.5e-07 Score=75.32 Aligned_cols=40 Identities=20% Similarity=0.328 Sum_probs=36.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALE 45 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 9999999999999999999999887653
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.1e-06 Score=74.82 Aligned_cols=38 Identities=32% Similarity=0.278 Sum_probs=34.5
Q ss_pred cccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.+.||+++|+|+ |.||+.+++.|...|++|+++++++.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~ 45 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER 45 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 367999999998 59999999999999999999999874
|
| >2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.48 E-value=2.2e-07 Score=77.05 Aligned_cols=90 Identities=13% Similarity=0.161 Sum_probs=65.0
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHH--Hc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRH--MK 139 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~--l~ 139 (243)
..+++++|+|+|.||..++..+...|.+|+++|+++. .......|+...+..+.+..+|+|+.|+.... +. +. +.
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~~~~~~~~~aDvVilav~~~~-~~-~v~~l~ 93 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVLCYSEAASRSDVIVLAVHREH-YD-FLAELA 93 (201)
Confidence 4567899999999999999999999999999998876 32333345544456667788999999875432 21 11 33
Q ss_pred cCCCCeEEEEecCCC
Q 037949 140 QMKNAAIVCNIGHFD 154 (243)
Q Consensus 140 ~l~~g~~vvnvg~~~ 154 (243)
.++++.++++++.+.
T Consensus 94 ~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 94 DSLKGRVLIDVSNNQ 108 (201)
Confidence 345678888877653
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.17 E-value=3.2e-06 Score=71.80 Aligned_cols=38 Identities=29% Similarity=0.294 Sum_probs=34.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 42 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG 42 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH
Confidence 578999999986 99999999999999999999998765
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.6e-06 Score=73.29 Aligned_cols=39 Identities=26% Similarity=0.305 Sum_probs=35.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc-hhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL-ICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~-~r~ 100 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++ .++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEA 45 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHH
Confidence 578999999977 999999999999999999999988 554
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.17 E-value=1.9e-06 Score=75.95 Aligned_cols=42 Identities=26% Similarity=0.283 Sum_probs=37.4
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+|+|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~ 47 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDK 47 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 3679999999986 99999999999999999999999876543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.17 E-value=1e-06 Score=84.48 Aligned_cols=126 Identities=14% Similarity=0.205 Sum_probs=73.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc---------hhHHHHhhcCCcccCHHhhh-cCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL---------ICALQALTEGIPVLTREDVV-SEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~---------~r~~~a~~~G~~~~~~~~~~-~~aDvvi~a~G~ 129 (243)
.+.||+++|+|++ +||+++|+.|...|++|++.|++. .+++.... +.- .+..++.+.+-.
T Consensus 5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~---------~i~~~g~~~~~d~~d~ 75 (604)
T 2et6_A 5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVD---------EIVKNGGVAVADYNNV 75 (604)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHH---------HHHHTTCEEEEECCCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHH---------HHHhcCCeEEEEcCCH
Confidence 3679999999998 999999999999999999998865 22211110 000 122233332211
Q ss_pred ---hhcccH--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCe
Q 037949 130 ---ADIIMV--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLL 197 (243)
Q Consensus 130 ---~~~i~~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~i 197 (243)
..+++. +.+. +.+.+|+|+|+.. .+++.+.+... +..|+....+.... +++.|. .|+|
T Consensus 76 ~~~~~~v~~~~~~~G--~iDiLVnNAGi~~~~~~~~~~~~~~~~~-------~~vNl~g~~~~~~a-~~p~m~~~~~G~I 145 (604)
T 2et6_A 76 LDGDKIVETAVKNFG--TVHVIINNAGILRDASMKKMTEKDYKLV-------IDVHLNGAFAVTKA-AWPYFQKQKYGRI 145 (604)
T ss_dssp TCHHHHHHHHHHHHS--CCCEEEECCCCCCCBCTTTCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHcC--CCCEEEECCCCCCCCChhhCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHHcCCCEE
Confidence 122221 2344 4589999999753 23455555431 23344333333334 676663 3899
Q ss_pred ecccCCCC
Q 037949 198 MNLGCPTG 205 (243)
Q Consensus 198 vNl~s~~g 205 (243)
||++|..|
T Consensus 146 VnisS~ag 153 (604)
T 2et6_A 146 VNTSSPAG 153 (604)
T ss_dssp EEECCHHH
T ss_pred EEECCHHH
Confidence 99999654
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.2e-06 Score=74.48 Aligned_cols=38 Identities=34% Similarity=0.453 Sum_probs=34.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 40 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA 40 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcch
Confidence 468999999986 99999999999999999999998765
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=2.4e-06 Score=72.68 Aligned_cols=41 Identities=22% Similarity=0.266 Sum_probs=36.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~ 47 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN 47 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3689999999986 9999999999999999999999987653
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.17 E-value=1.6e-06 Score=73.46 Aligned_cols=40 Identities=28% Similarity=0.364 Sum_probs=36.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~ 44 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQ 44 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 9999999999999999999999887653
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.17 E-value=1.2e-06 Score=74.49 Aligned_cols=42 Identities=21% Similarity=0.128 Sum_probs=37.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.+|+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~ 46 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEK 46 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 3679999999986 99999999999999999999999876543
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=1.8e-06 Score=73.38 Aligned_cols=41 Identities=20% Similarity=0.160 Sum_probs=36.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 52 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVD 52 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3679999999976 9999999999999999999999887643
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.16 E-value=1.8e-06 Score=74.49 Aligned_cols=41 Identities=32% Similarity=0.405 Sum_probs=36.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~ 67 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACA 67 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3689999999986 9999999999999999999999887653
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.15 E-value=2.8e-06 Score=72.07 Aligned_cols=38 Identities=26% Similarity=0.279 Sum_probs=34.2
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+|+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 40 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAK 40 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 6899999976 9999999999999999999999887643
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=98.15 E-value=8.6e-06 Score=70.63 Aligned_cols=97 Identities=15% Similarity=0.066 Sum_probs=69.1
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeCCchhHHHHhhc-CCcc-cCHHhhhcCCcEEEEccCChhccc---H
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEIDLICALQALTE-GIPV-LTREDVVSEAGLFVTTTENADIIM---V 135 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~~~r~~~a~~~-G~~~-~~~~~~~~~aDvvi~a~G~~~~i~---~ 135 (243)
.+++.|||+|.+|..++..+...|. +|+++|+++.++...... |+.+ .+..+.++++|+|+.|+.. ..+. .
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl~ 81 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVCE 81 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHHH
Confidence 3679999999999999999999998 899999999987666553 7764 3677788899999999843 2221 1
Q ss_pred HHHcc-CCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQ-MKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~-l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.-+. ++++.+++++..+ +..+.+..
T Consensus 82 ~l~~~~l~~~~iiiS~~ag---i~~~~l~~ 108 (280)
T 3tri_A 82 ELKDILSETKILVISLAVG---VTTPLIEK 108 (280)
T ss_dssp HHHHHHHTTTCEEEECCTT---CCHHHHHH
T ss_pred HHHhhccCCCeEEEEecCC---CCHHHHHH
Confidence 11223 5667677764433 34444443
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=5.1e-06 Score=70.63 Aligned_cols=83 Identities=13% Similarity=0.145 Sum_probs=63.0
Q ss_pred EEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhh-cCCccc-CHHhhhcCCcEEEEccCChhcccHHHHccCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALT-EGIPVL-TREDVVSEAGLFVTTTENADIIMVRHMKQMK 142 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~-~G~~~~-~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~ 142 (243)
+++|+|+|.||..++..+...| .+|+++|+++.+...... .|..+. +..+.+ ++|+|+.|+. +..+. +.+..+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~-~v~~~l~ 78 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDME-AACKNIR 78 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHH-HHHTTCC
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHH-HHHHHhc
Confidence 6899999999999999999999 899999999887655544 376543 455667 8999999987 44343 4555554
Q ss_pred C-CeEEEEec
Q 037949 143 N-AAIVCNIG 151 (243)
Q Consensus 143 ~-g~~vvnvg 151 (243)
+ +.+++++.
T Consensus 79 ~~~~ivv~~~ 88 (263)
T 1yqg_A 79 TNGALVLSVA 88 (263)
T ss_dssp CTTCEEEECC
T ss_pred cCCCEEEEec
Confidence 2 77888763
|
| >3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.5e-05 Score=70.44 Aligned_cols=98 Identities=21% Similarity=0.253 Sum_probs=72.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHhh----cCCc--ccCHHhhhcCCcEEEEccCChh-cc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQALT----EGIP--VLTREDVVSEAGLFVTTTENAD-II 133 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~~----~G~~--~~~~~~~~~~aDvvi~a~G~~~-~i 133 (243)
..++++|+|+|.+|...++.++. ++. +|.++|++ .....+.. .|.+ ..++++++.++|+|+.||+... .+
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~~pvl 198 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRSTTPLF 198 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCSSCSS
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCCCccc
Confidence 46899999999999999999886 455 89999999 33223322 3553 2378888899999999987653 34
Q ss_pred cHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 134 MVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
. -+.+++|..|+.+|... .++|...+..
T Consensus 199 ~---~~~l~~G~~V~~vGs~~p~~~El~~~~~~~ 229 (313)
T 3hdj_A 199 A---GQALRAGAFVGAIGSSLPHTRELDDEALRR 229 (313)
T ss_dssp C---GGGCCTTCEEEECCCSSTTCCCCCHHHHHH
T ss_pred C---HHHcCCCcEEEECCCCCCchhhcCHHHHhc
Confidence 3 34689999999999763 4677665543
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.6e-06 Score=74.56 Aligned_cols=40 Identities=23% Similarity=0.169 Sum_probs=36.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+|+.|...|++|+++++++.++.
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 44 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLE 44 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999976 9999999999999999999999987653
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.1e-06 Score=74.08 Aligned_cols=39 Identities=31% Similarity=0.380 Sum_probs=34.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC-CchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEI-DLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~-~~~r~ 100 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++ ++.++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~ 42 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKA 42 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence 468999999976 9999999999999999999998 66554
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.14 E-value=1.8e-06 Score=75.31 Aligned_cols=40 Identities=25% Similarity=0.249 Sum_probs=36.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+|+.|...|++|+++++++.++.
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~ 64 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLE 64 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 679999999987 9999999999999999999999987653
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.14 E-value=2.1e-06 Score=73.45 Aligned_cols=38 Identities=21% Similarity=0.241 Sum_probs=34.9
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+.||+++|+|+ |.||+.+++.|...|++|+++++++.+
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~ 45 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR 45 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHH
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHH
Confidence 67899999996 699999999999999999999998765
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.14 E-value=2.5e-06 Score=72.40 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=33.2
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
||+++|+|++ .||+.+++.|...|++|+++++++.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQE 38 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence 6899999976 99999999999999999999998765
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=1.6e-06 Score=73.64 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=36.4
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHh---CCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKA---VGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~---~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.|.. .|++|+++++++.++.
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~ 47 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLR 47 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHH
Confidence 3679999999987 999999999998 8999999999987653
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=98.13 E-value=1e-05 Score=68.88 Aligned_cols=85 Identities=19% Similarity=0.205 Sum_probs=62.3
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeC--CchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhccc--HHHHccC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEI--DLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIM--VRHMKQM 141 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~--~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~--~~~l~~l 141 (243)
++.|+|+|.+|..++..|...|.+|+++|+ ++.+.......|.. .+..+.+.++|+|+.|+....... .+..+.+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~ 80 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAARRAGRHV 80 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTC
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhc
Confidence 689999999999999999999999999888 55555444445665 556677789999999986643221 1234555
Q ss_pred CCCeEEEEecCC
Q 037949 142 KNAAIVCNIGHF 153 (243)
Q Consensus 142 ~~g~~vvnvg~~ 153 (243)
++ ++++++..
T Consensus 81 ~~--~vi~~s~~ 90 (264)
T 1i36_A 81 RG--IYVDINNI 90 (264)
T ss_dssp CS--EEEECSCC
T ss_pred Cc--EEEEccCC
Confidence 55 77776543
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.4e-06 Score=70.89 Aligned_cols=123 Identities=15% Similarity=0.161 Sum_probs=69.2
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCC--CEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEc-cCChhcccHHHH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVG--ARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTT-TENADIIMVRHM 138 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~G--a~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a-~G~~~~i~~~~l 138 (243)
||+++|+|++ .||+.+|+.|...| ++|+++++++.++...... + +..+. +.+ ......+. +.+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~----------~-~~~~~~~~~Dv~~~~~v~-~~~ 69 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEK----------Y-GDRFFYVVGDITEDSVLK-QLV 69 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHH----------H-GGGEEEEESCTTSHHHHH-HHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHH----------h-CCceEEEECCCCCHHHHH-HHH
Confidence 6899999986 99999999998775 6898899988765433221 0 01111 111 01111121 112
Q ss_pred ccC-----CCCeEEEEecCCC-----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh--cCCeecccCCCCC
Q 037949 139 KQM-----KNAAIVCNIGHFD-----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA--ERLLMNLGCPTGH 206 (243)
Q Consensus 139 ~~l-----~~g~~vvnvg~~~-----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~--~G~ivNl~s~~g~ 206 (243)
+.+ +.+.+|+|+|... .+.+.+.+... +..++....+-... ++..|. .|+|||++|..+.
T Consensus 70 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~-------~~~N~~g~~~~~~~-~~~~m~~~~g~iv~isS~~~~ 141 (254)
T 3kzv_A 70 NAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKL-------YDINFFSIVSLVGI-ALPELKKTNGNVVFVSSDACN 141 (254)
T ss_dssp HHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEECCSCCC
T ss_pred HHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHH-------HHHhhHHHHHHHHH-HHHHHHhcCCeEEEEcCchhc
Confidence 211 5688899998742 13444544331 22333222222223 555553 4999999997654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.12 E-value=1.8e-06 Score=74.07 Aligned_cols=41 Identities=34% Similarity=0.429 Sum_probs=36.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 47 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGR 47 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3679999999986 9999999999999999999999987653
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.11 E-value=5.5e-07 Score=79.35 Aligned_cols=36 Identities=36% Similarity=0.644 Sum_probs=33.4
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++|++
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 3689999999986 99999999999999999999887
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.11 E-value=3.1e-06 Score=71.86 Aligned_cols=38 Identities=26% Similarity=0.188 Sum_probs=34.3
Q ss_pred cccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.+++|+++|+|+ |.||+.+|+.|...|++|+++++++.
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~ 51 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR 51 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh
Confidence 468999999997 48999999999999999999998854
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.11 E-value=3.9e-06 Score=70.74 Aligned_cols=39 Identities=26% Similarity=0.423 Sum_probs=35.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 43 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL 43 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 578999999986 999999999999999999999987654
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=8.1e-06 Score=76.24 Aligned_cols=92 Identities=13% Similarity=0.078 Sum_probs=70.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc----CCc-ccCHHhhhcC---CcEEEEccCCh---
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE----GIP-VLTREDVVSE---AGLFVTTTENA--- 130 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~----G~~-~~~~~~~~~~---aDvvi~a~G~~--- 130 (243)
..-+++.|||+|.+|..+|..+...|.+|+++|+++++.+..... |+. +.++++++.. +|+|+.|+...
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 345789999999999999999999999999999999876554443 554 3457777765 99999997653
Q ss_pred -hcccHHHHccCCCCeEEEEecCCC
Q 037949 131 -DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 131 -~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+++ +....++++.+|++++.+.
T Consensus 93 ~~vl~-~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 93 DAAID-SLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHHHH-HHGGGCCTTCEEEECSCCC
T ss_pred HHHHH-HHHhhcCCCCEEEECCCCC
Confidence 2342 3456678899999988764
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.11 E-value=5.2e-06 Score=70.53 Aligned_cols=40 Identities=28% Similarity=0.220 Sum_probs=36.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLE 45 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 678999999986 9999999999999999999999887653
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=98.11 E-value=7.3e-06 Score=69.16 Aligned_cols=89 Identities=13% Similarity=0.186 Sum_probs=61.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHH-HhhcC-CcccC---HHhhhcCCcEEEEccCChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQ-ALTEG-IPVLT---REDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~-a~~~G-~~~~~---~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
.+.|++|+|+|+|.+|...++.|...|++|++++++...... ....+ +.... ..+.+.++|+||.||+.+.. +.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~-N~ 106 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQAV-NK 106 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTHH-HH
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHHH-HH
Confidence 478999999999999999999999999999999776543212 12222 33221 13446789999999988753 44
Q ss_pred HHHccCCCCeEEEEec
Q 037949 136 RHMKQMKNAAIVCNIG 151 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg 151 (243)
......+ .++.||+.
T Consensus 107 ~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 107 FVKQHIK-NDQLVNMA 121 (223)
T ss_dssp HHHHHSC-TTCEEEC-
T ss_pred HHHHHHh-CCCEEEEe
Confidence 3344445 56666643
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.11 E-value=7.4e-06 Score=71.46 Aligned_cols=101 Identities=19% Similarity=0.147 Sum_probs=69.4
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-hc-----CCc--cc---CHHhhh
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-TE-----GIP--VL---TREDVV 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~~-----G~~--~~---~~~~~~ 117 (243)
++.++.+. ...+.|++++|+|+|++|++++..|...|+ +|+++++++.+.+... .. +.. .. ++.+.+
T Consensus 114 ~~~~l~~~-~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l 192 (283)
T 3jyo_A 114 FGRGMEEG-LPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVI 192 (283)
T ss_dssp HHHHHHHH-CTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHH
T ss_pred HHHHHHHh-CcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHH
Confidence 34444432 235789999999999999999999999999 7999999988754322 11 112 22 345667
Q ss_pred cCCcEEEEccCC--hh----cccHHHHccCCCCeEEEEecCCC
Q 037949 118 SEAGLFVTTTEN--AD----IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 ~~aDvvi~a~G~--~~----~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++|+||+||+. .+ .+. .+.++++..|..+-..+
T Consensus 193 ~~~DiVInaTp~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P 232 (283)
T 3jyo_A 193 AAADGVVNATPMGMPAHPGTAFD---VSCLTKDHWVGDVVYMP 232 (283)
T ss_dssp HHSSEEEECSSTTSTTSCSCSSC---GGGCCTTCEEEECCCSS
T ss_pred hcCCEEEECCCCCCCCCCCCCCC---HHHhCCCCEEEEecCCC
Confidence 789999999842 11 122 34567788888765543
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=6.9e-06 Score=68.44 Aligned_cols=40 Identities=23% Similarity=0.129 Sum_probs=35.5
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+|+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 41 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEK 41 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 37899999986 89999999999999999999999876543
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=98.10 E-value=1.4e-05 Score=70.72 Aligned_cols=85 Identities=16% Similarity=0.116 Sum_probs=63.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-CC--------------c-ccCHHhhhcCCcEEEEccC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-GI--------------P-VLTREDVVSEAGLFVTTTE 128 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G~--------------~-~~~~~~~~~~aDvvi~a~G 128 (243)
.+++|+|+|.||..+|..|...|.+|+++|+++.+....... +. . ..++++.+.++|+|+.|+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 589999999999999999999999999999998876554443 21 1 1245666788999999987
Q ss_pred Chhc---ccHHHHccCCCCeEEEEe
Q 037949 129 NADI---IMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 129 ~~~~---i~~~~l~~l~~g~~vvnv 150 (243)
.... + .+....++++..+++.
T Consensus 85 ~~~~~~~~-~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 85 AIHHASIA-ANIASYISEGQLIILN 108 (359)
T ss_dssp GGGHHHHH-HHHGGGCCTTCEEEES
T ss_pred chHHHHHH-HHHHHhCCCCCEEEEc
Confidence 6432 2 1234557888888876
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.10 E-value=4.1e-06 Score=71.87 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=33.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++|++
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 3689999999987 89999999999999999999987
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.10 E-value=5.4e-06 Score=69.95 Aligned_cols=41 Identities=20% Similarity=0.283 Sum_probs=36.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.++..
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~ 44 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLRE 44 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 578999999986 99999999999999999999999876543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.10 E-value=2.1e-06 Score=73.67 Aligned_cols=41 Identities=27% Similarity=0.263 Sum_probs=35.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
+.+|+++|+|++ .||+.+++.|...|++|+++++++.++..
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~ 44 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD 44 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 468999999985 99999999999999999999999876543
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=3.9e-06 Score=71.08 Aligned_cols=37 Identities=16% Similarity=0.111 Sum_probs=33.1
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
|+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 38 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ 38 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 579999976 9999999999999999999999987653
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=1.6e-06 Score=73.26 Aligned_cols=36 Identities=25% Similarity=0.188 Sum_probs=32.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.+|+++|+|++ .||+.+|+.|...|++|++.+++.
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~ 38 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS 38 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999986 999999999999999999988754
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.09 E-value=1.5e-05 Score=60.53 Aligned_cols=85 Identities=19% Similarity=0.244 Sum_probs=57.8
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCccc-----CHH---h-hhcCCcEEEEccCChhc-
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPVL-----TRE---D-VVSEAGLFVTTTENADI- 132 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~~-----~~~---~-~~~~aDvvi~a~G~~~~- 132 (243)
+.+++|+|+|.+|..+++.|...|.+|+++|+++.+...... .+..+. +.+ + .+.++|+|+.|++....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 468999999999999999999999999999999887654443 354321 221 1 24689999999887532
Q ss_pred -ccHHHHccCCCCeEEE
Q 037949 133 -IMVRHMKQMKNAAIVC 148 (243)
Q Consensus 133 -i~~~~l~~l~~g~~vv 148 (243)
.-......++++.+++
T Consensus 84 ~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 84 LMSSLLAKSYGINKTIA 100 (140)
T ss_dssp HHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 1112344455554443
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=3.9e-06 Score=72.79 Aligned_cols=40 Identities=25% Similarity=0.134 Sum_probs=35.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEe-CCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTE-IDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d-~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+++.|...|++|++++ +++.++.
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~ 48 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN 48 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHH
Confidence 679999999987 999999999999999999999 8877653
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.09 E-value=2.5e-06 Score=74.23 Aligned_cols=37 Identities=24% Similarity=0.283 Sum_probs=33.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.||+++|+|++ .||+.+|+.|...|++|++++++.
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~ 83 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPA 83 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999987 999999999999999999998873
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=2.2e-06 Score=73.13 Aligned_cols=36 Identities=25% Similarity=0.222 Sum_probs=33.5
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|+ |.||+.+++.|...|++|+++++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 57899999998 5899999999999999999999987
|
| >2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.08 E-value=1e-05 Score=75.81 Aligned_cols=90 Identities=13% Similarity=0.069 Sum_probs=70.0
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----cCCc-ccCHHhhhcC---CcEEEEccCCh----
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----EGIP-VLTREDVVSE---AGLFVTTTENA---- 130 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----~G~~-~~~~~~~~~~---aDvvi~a~G~~---- 130 (243)
..++.|||+|.+|..+|..+...|.+|+++|+++.+.+.... .|+. +.++.+++.. +|+|+.|+...
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 367999999999999999999999999999999988765554 3544 3457777665 99999998663
Q ss_pred hcccHHHHccCCCCeEEEEecCCC
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++. +....++++.+|++++-..
T Consensus 90 ~vl~-~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 90 ALIN-QIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp HHHH-HHGGGCCTTCEEEECSCCC
T ss_pred HHHH-HHHHhCCCCCEEEECCCCC
Confidence 2332 3456678899999987653
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.08 E-value=3.1e-06 Score=72.45 Aligned_cols=40 Identities=28% Similarity=0.263 Sum_probs=36.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.+|+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 44 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLE 44 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 9999999999999999999999987653
|
| >1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A | Back alignment and structure |
|---|
Probab=98.07 E-value=2.8e-05 Score=68.85 Aligned_cols=96 Identities=19% Similarity=0.180 Sum_probs=69.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHhhc-C---C--cccCHHhhhcCCcEEEEccCChh-cc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQALTE-G---I--PVLTREDVVSEAGLFVTTTENAD-II 133 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~~~-G---~--~~~~~~~~~~~aDvvi~a~G~~~-~i 133 (243)
..++++|+|+|.+|+.++..++. .+. +|.++|+++++.+...+. + . .+.+.++++ ++|+|+.||.+.. .+
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~~pv~ 202 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSRKPVV 202 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCSSCCB
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCCCcee
Confidence 57899999999999999998886 455 899999999876443321 1 2 234567788 9999999987543 33
Q ss_pred cHHHHccCCCCeEEEEecCCC---CCCChhHH
Q 037949 134 MVRHMKQMKNAAIVCNIGHFD---NEIDMLDL 162 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~~---~~id~~~l 162 (243)
. .+.+++|..|+.+|... .+++...+
T Consensus 203 ~---~~~l~~G~~V~~ig~~~p~~~el~~~~~ 231 (322)
T 1omo_A 203 K---AEWVEEGTHINAIGADGPGKQELDVEIL 231 (322)
T ss_dssp C---GGGCCTTCEEEECSCCSTTCCCBCHHHH
T ss_pred c---HHHcCCCeEEEECCCCCCCccccCHHHH
Confidence 3 25679999999998663 34554433
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.7e-06 Score=72.98 Aligned_cols=38 Identities=21% Similarity=0.053 Sum_probs=33.0
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-e--CCchhHH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGT-E--IDLICAL 101 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d--~~~~r~~ 101 (243)
||+++|+|++ .||+.+++.|...|++|+++ + +++.++.
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~ 42 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQ 42 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHH
Confidence 5899999986 99999999999999999999 6 8877653
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.3e-06 Score=74.12 Aligned_cols=40 Identities=25% Similarity=0.243 Sum_probs=32.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.||+++|+|++ .||+.+|+.|...|++|++++++....
T Consensus 6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 46 (257)
T 3tl3_A 6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV 46 (257)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH
T ss_pred eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH
Confidence 4689999999986 999999999999999999999876543
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.3e-05 Score=69.36 Aligned_cols=87 Identities=13% Similarity=0.111 Sum_probs=62.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-------------cCHHhhhc---CCcEEEEccC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-------------LTREDVVS---EAGLFVTTTE 128 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-------------~~~~~~~~---~aDvvi~a~G 128 (243)
.+++|+|+|.+|..+|..|...|.+|+++|+++.+.+...+.|... .+..+... ++|+|+.|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 4799999999999999999999999999999988765555445321 12333333 8999999987
Q ss_pred Chhc---ccHHHHccCCCCeEEEEecC
Q 037949 129 NADI---IMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 129 ~~~~---i~~~~l~~l~~g~~vvnvg~ 152 (243)
.... +. +....++++.+++++.-
T Consensus 84 ~~~~~~v~~-~l~~~l~~~~~iv~~~~ 109 (316)
T 2ew2_A 84 AQQLDAMFK-AIQPMITEKTYVLCLLN 109 (316)
T ss_dssp HHHHHHHHH-HHGGGCCTTCEEEECCS
T ss_pred cccHHHHHH-HHHHhcCCCCEEEEecC
Confidence 5432 21 22345677888887643
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.05 E-value=4.8e-06 Score=71.30 Aligned_cols=41 Identities=20% Similarity=0.299 Sum_probs=36.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.+++++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~ 69 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLE 69 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHH
Confidence 5789999999976 9999999999999999999999887543
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.05 E-value=2.2e-05 Score=72.73 Aligned_cols=88 Identities=18% Similarity=0.151 Sum_probs=65.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-------------------cC-Cc-ccCHHhhhcCCcEE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-------------------EG-IP-VLTREDVVSEAGLF 123 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-------------------~G-~~-~~~~~~~~~~aDvv 123 (243)
.+|.|+|+|.+|..+|..+...|.+|+++|+++.+.+.... .+ .. +.++.++++++|+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 47999999999999999999999999999999987644333 11 11 23456677899999
Q ss_pred EEccCChh---------ccc---HHHHccCCCCeEEEEecC
Q 037949 124 VTTTENAD---------IIM---VRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 124 i~a~G~~~---------~i~---~~~l~~l~~g~~vvnvg~ 152 (243)
|.|++++. .+. ....+.++++.+|++.+-
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST 123 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred EEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence 99988762 121 123456789999998774
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.5e-05 Score=69.60 Aligned_cols=99 Identities=12% Similarity=0.108 Sum_probs=67.6
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcccCHHhh--hcCCcEEEEc
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVLTREDV--VSEAGLFVTT 126 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~~~~~~--~~~aDvvi~a 126 (243)
++.++.+. +..+.|++++|+|+|++|++++..|...|+ +|+++++++++... ....+...+.++. + ++|+||+|
T Consensus 109 ~~~~L~~~-~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~-La~~~~~~~~~~l~~l-~~DivIna 185 (282)
T 3fbt_A 109 FGKMLSKF-RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSE-IYGEFKVISYDELSNL-KGDVIINC 185 (282)
T ss_dssp HHHHHHHT-TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHH-HCTTSEEEEHHHHTTC-CCSEEEEC
T ss_pred HHHHHHHc-CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHhcCcccHHHHHhc-cCCEEEEC
Confidence 34454432 345789999999999999999999999999 99999999987533 2222322222221 4 89999999
Q ss_pred cCC--hh-----cccHHHHccCCCCeEEEEecCCC
Q 037949 127 TEN--AD-----IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~--~~-----~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|+. .+ .+.. +.++++..|..+-..+
T Consensus 186 Tp~Gm~~~~~~~pi~~---~~l~~~~~v~DlvY~P 217 (282)
T 3fbt_A 186 TPKGMYPKEGESPVDK---EVVAKFSSAVDLIYNP 217 (282)
T ss_dssp SSTTSTTSTTCCSSCH---HHHTTCSEEEESCCSS
T ss_pred CccCccCCCccCCCCH---HHcCCCCEEEEEeeCC
Confidence 843 11 1332 3457788888876654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.05 E-value=3.8e-07 Score=87.53 Aligned_cols=127 Identities=13% Similarity=0.144 Sum_probs=72.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch-hHH-HHhhcCCcccCHHhhhcCCcEEEEccCChhcccH--
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI-CAL-QALTEGIPVLTREDVVSEAGLFVTTTENADIIMV-- 135 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~-r~~-~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~-- 135 (243)
.+.||+++|+|++ +||+++|+.|...|++|++.|++.. ... .....|.++. ...+|+- +....+++.
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~-----~~~~Dv~---~~~~~~~~~~~ 390 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAW-----PDQHDVA---KDSEAIIKNVI 390 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEE-----EECCCHH---HHHHHHHHHHH
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEE-----EEEcChH---HHHHHHHHHHH
Confidence 4689999999998 9999999999999999999986432 111 1111222111 0011210 000112211
Q ss_pred HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh-h--cCCeecccCCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL-A--ERLLMNLGCPTG 205 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll-~--~G~ivNl~s~~g 205 (243)
+.+. +-+.+|+|+|+.. .+++.+.+... +..|.....+.... ++..| . .|+|||++|..|
T Consensus 391 ~~~G--~iDiLVnNAGi~~~~~~~~~~~~~~~~~-------~~vNl~g~~~~~~~-~~p~m~~~~~G~IVnisS~ag 457 (604)
T 2et6_A 391 DKYG--TIDILVNNAGILRDRSFAKMSKQEWDSV-------QQVHLIGTFNLSRL-AWPYFVEKQFGRIINITSTSG 457 (604)
T ss_dssp HHHS--CCCEEEECCCCCCCBCTTTCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHTTCEEEEEECCHHH
T ss_pred HhcC--CCCEEEECCCCCCCCChhhCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHHcCCCEEEEECChhh
Confidence 2344 4589999999763 23455555431 23344332333333 66666 2 389999999653
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.05 E-value=4.1e-06 Score=72.13 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=34.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+. |+++|+|++ .||+.+|+.|...|++|+++++++.++.
T Consensus 20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~ 59 (272)
T 2nwq_A 20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQ 59 (272)
T ss_dssp -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 45 899999987 8999999999999999999999987653
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.3e-06 Score=74.99 Aligned_cols=39 Identities=23% Similarity=0.237 Sum_probs=31.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC-Cchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEI-DLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~-~~~r 99 (243)
.+.||+++|+|++ .||+.+|+.|...|++|++.+. ++.+
T Consensus 24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~ 64 (267)
T 3u5t_A 24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAA 64 (267)
T ss_dssp ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence 3579999999987 9999999999999999998754 4433
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.05 E-value=3e-06 Score=72.20 Aligned_cols=39 Identities=18% Similarity=0.101 Sum_probs=34.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.+|+++|+|++ .||+.+++.|...|++|+++++++.+
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 57 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP 57 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHh
Confidence 4679999999987 99999999999999999999998764
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.04 E-value=9.6e-06 Score=67.52 Aligned_cols=40 Identities=18% Similarity=0.033 Sum_probs=34.6
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL 104 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~ 104 (243)
|+++|+|++ .||+.+|+.|...|++|+++++++.++....
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~ 42 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVT 42 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 679999987 9999999999999999999999988765443
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=4.7e-06 Score=71.75 Aligned_cols=39 Identities=28% Similarity=0.438 Sum_probs=35.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++..
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 65 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE 65 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 4679999999987 99999999999999999999988754
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.03 E-value=1e-06 Score=75.29 Aligned_cols=38 Identities=13% Similarity=0.068 Sum_probs=34.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.+.||+++|+|++ .||+.+|+.|...|++|++++++..
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 46 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAK 46 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGG
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCcc
Confidence 4789999999987 9999999999999999999877543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.03 E-value=3.6e-06 Score=71.29 Aligned_cols=37 Identities=27% Similarity=0.362 Sum_probs=33.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~ 39 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP 39 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 468999999985 9999999999999999999998765
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=1.3e-05 Score=66.91 Aligned_cols=41 Identities=34% Similarity=0.464 Sum_probs=36.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.++|++++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 45 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD 45 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3689999999985 9999999999999999999999887653
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.03 E-value=9.7e-06 Score=68.61 Aligned_cols=120 Identities=15% Similarity=0.045 Sum_probs=70.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~ 139 (243)
.++||+++|+|++ .||+.+++.|...|++|+++++++.... ..+ .+ ... +|+ ...+. +.++
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~-~~-----~~~-~D~-------~~~~~-~~~~ 77 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK---RSG-HR-----YVV-CDL-------RKDLD-LLFE 77 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HTC-SE-----EEE-CCT-------TTCHH-HHHH
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH---hhC-Ce-----EEE-eeH-------HHHHH-HHHH
Confidence 5789999999986 9999999999999999999999874321 111 00 011 333 11222 2333
Q ss_pred cC-CCCeEEEEecCCCC----CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCCCC
Q 037949 140 QM-KNAAIVCNIGHFDN----EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPTGH 206 (243)
Q Consensus 140 ~l-~~g~~vvnvg~~~~----~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~g~ 206 (243)
.+ +.+.+|+|+|.... +.+.+.+... +..++....+.... +++.|. .|+|||++|..+.
T Consensus 78 ~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~-------~~~N~~g~~~~~~~-~~~~~~~~~~g~iv~isS~~~~ 144 (249)
T 1o5i_A 78 KVKEVDILVLNAGGPKAGFFDELTNEDFKEA-------IDSLFLNMIKIVRN-YLPAMKEKGWGRIVAITSFSVI 144 (249)
T ss_dssp HSCCCSEEEECCCCCCCBCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCGGGT
T ss_pred HhcCCCEEEECCCCCCCCChhhCCHHHHHHH-------HHHHhHHHHHHHHH-HHHHHHHcCCcEEEEEcchHhc
Confidence 33 67888888886531 2333433321 12232221111112 455552 3799999996543
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=98.03 E-value=1.7e-05 Score=69.18 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=60.6
Q ss_pred CcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh---cccHHHHc
Q 037949 64 GKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD---IIMVRHMK 139 (243)
Q Consensus 64 g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~---~i~~~~l~ 139 (243)
.++|+||| +|.||..+|..++..|.+|+++|+++.. +..+.+.++|+|+.|+.... ++. +...
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------~~~~~~~~aDvVilavp~~~~~~vl~-~l~~ 87 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------VAESILANADVVIVSVPINLTLETIE-RLKP 87 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------GHHHHHTTCSEEEECSCGGGHHHHHH-HHGG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------CHHHHhcCCCEEEEeCCHHHHHHHHH-HHHh
Confidence 46899999 9999999999999999999999988752 24456778999999976543 232 2334
Q ss_pred cCCCCeEEEEecCCC
Q 037949 140 QMKNAAIVCNIGHFD 154 (243)
Q Consensus 140 ~l~~g~~vvnvg~~~ 154 (243)
.++++.+|++++...
T Consensus 88 ~l~~~~iv~~~~svk 102 (298)
T 2pv7_A 88 YLTENMLLADLTSVK 102 (298)
T ss_dssp GCCTTSEEEECCSCC
T ss_pred hcCCCcEEEECCCCC
Confidence 578889998876543
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=98.03 E-value=2.1e-05 Score=73.48 Aligned_cols=90 Identities=12% Similarity=0.111 Sum_probs=70.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC---Cc---ccCHHhhhc---CCcEEEEccCCh----
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG---IP---VLTREDVVS---EAGLFVTTTENA---- 130 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G---~~---~~~~~~~~~---~aDvvi~a~G~~---- 130 (243)
..++.|||+|.+|..+|..+...|.+|+++|+++.+.+.....+ .. ..++++++. ++|+|+.++...
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 35799999999999999999999999999999999876655443 22 245667664 599999998664
Q ss_pred hcccHHHHccCCCCeEEEEecCCC
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++. +....++++.+|++.|...
T Consensus 84 ~vl~-~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 84 DFIE-KLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp HHHH-HHGGGCCTTCEEEECSCCC
T ss_pred HHHH-HHHHhcCCCCEEEEcCCCC
Confidence 2342 4567789999999988764
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=1.6e-05 Score=73.30 Aligned_cols=87 Identities=11% Similarity=0.071 Sum_probs=64.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc------------------CCc-ccCHHhhhcCCcEEEE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE------------------GIP-VLTREDVVSEAGLFVT 125 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~------------------G~~-~~~~~~~~~~aDvvi~ 125 (243)
.++.|+|+|.+|..+|..+.. |.+|+++|+++.+.+..... +.. +.++.+++.++|+||.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDvVii 115 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYVII 115 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCEEEE
Confidence 589999999999999999987 99999999999876543321 122 2346677889999999
Q ss_pred ccCChh----------ccc---HHHHccCCCCeEEEEecCC
Q 037949 126 TTENAD----------IIM---VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 126 a~G~~~----------~i~---~~~l~~l~~g~~vvnvg~~ 153 (243)
|++++. .+. ..... ++++.+||+.+..
T Consensus 116 aVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv 155 (432)
T 3pid_A 116 ATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTI 155 (432)
T ss_dssp CCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCC
T ss_pred eCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCC
Confidence 987751 111 12344 7899999986643
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.02 E-value=1.4e-06 Score=73.65 Aligned_cols=39 Identities=21% Similarity=0.179 Sum_probs=35.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.+
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 51 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA 51 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH
Confidence 4689999999986 99999999999999999999998764
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=1.4e-05 Score=73.48 Aligned_cols=87 Identities=17% Similarity=0.150 Sum_probs=63.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-------------------C-Cc-ccCHHhhhcCCcEEE
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-------------------G-IP-VLTREDVVSEAGLFV 124 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-------------------G-~~-~~~~~~~~~~aDvvi 124 (243)
++.|+|+|.+|..+|..+...|.+|+++|+++.+.+..... | .. +.+.++++.++|+|+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvvi 81 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSF 81 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEEE
Confidence 68999999999999999999999999999999876544331 2 12 224556678999999
Q ss_pred EccCChhc---------ccH---HHHccCCC---CeEEEEecC
Q 037949 125 TTTENADI---------IMV---RHMKQMKN---AAIVCNIGH 152 (243)
Q Consensus 125 ~a~G~~~~---------i~~---~~l~~l~~---g~~vvnvg~ 152 (243)
.|++++.. +.. +....+++ +.+|++.+.
T Consensus 82 iaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~St 124 (436)
T 1mv8_A 82 ICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRST 124 (436)
T ss_dssp ECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSC
T ss_pred EEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCC
Confidence 99876542 211 12334677 888888654
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=5.7e-06 Score=70.12 Aligned_cols=37 Identities=19% Similarity=0.066 Sum_probs=33.1
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
|+++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 39 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD 39 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHH
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 689999976 9999999999999999999999877653
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.6e-05 Score=70.14 Aligned_cols=88 Identities=15% Similarity=0.203 Sum_probs=65.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCC----CEEEEEeCCch--hHHHHhhcCCccc-CHHhhhcCCcEEEEccCChhcccH-
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVG----ARVMGTEIDLI--CALQALTEGIPVL-TREDVVSEAGLFVTTTENADIIMV- 135 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~G----a~V~v~d~~~~--r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G~~~~i~~- 135 (243)
..+|.|||+|.+|..++..|...| .+|+++|+++. +.+.....|+.+. +..+.+.++|+||.|+.. ..+..
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~-~~~~~v 100 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKP-HIIPFI 100 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCG-GGHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCH-HHHHHH
Confidence 357999999999999999999999 68999999985 5545555677643 567777889999999863 32221
Q ss_pred --HHHccCCCCeEEEEecC
Q 037949 136 --RHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 136 --~~l~~l~~g~~vvnvg~ 152 (243)
+....++++.+|+++.-
T Consensus 101 l~~l~~~l~~~~ivvs~s~ 119 (322)
T 2izz_A 101 LDEIGADIEDRHIVVSCAA 119 (322)
T ss_dssp HHHHGGGCCTTCEEEECCT
T ss_pred HHHHHhhcCCCCEEEEeCC
Confidence 22345677888888643
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=8.4e-06 Score=70.14 Aligned_cols=37 Identities=27% Similarity=0.249 Sum_probs=33.3
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.||+++|+|++ +||+.+|+.|...|++|+++++++
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 3689999999963 499999999999999999999987
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=4e-06 Score=71.69 Aligned_cols=40 Identities=25% Similarity=0.135 Sum_probs=34.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC-CchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEI-DLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~-~~~r~~ 101 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++ ++.++.
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 50 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQ 50 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHH
Confidence 578999999987 9999999999999999999999 776543
|
| >1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=3e-05 Score=69.60 Aligned_cols=97 Identities=15% Similarity=0.217 Sum_probs=71.0
Q ss_pred cCcEEEEEcCChHHHHHHHHHH-hCCC-EEEEEeCCchhHHHHhhc-----CCc---ccCHHhhhcCCcEEEEccCCh--
Q 037949 63 AGKIAVDCGHGDVGRGCAAALK-AVGA-RVMGTEIDLICALQALTE-----GIP---VLTREDVVSEAGLFVTTTENA-- 130 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~-~~Ga-~V~v~d~~~~r~~~a~~~-----G~~---~~~~~~~~~~aDvvi~a~G~~-- 130 (243)
..++++|||+|.+|..++..+. ..+. +|.++|+++++.+...+. |.. +.+.++++.++|+|+.||.+.
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~~ 207 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAY 207 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCCC
Confidence 5789999999999999988765 4555 899999998876544332 532 235778888999999998764
Q ss_pred -hcccHHHHccCCCCeEEEEecCCC---CCCChhHH
Q 037949 131 -DIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDL 162 (243)
Q Consensus 131 -~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l 162 (243)
+.+.. +.+++|..++.+|... .+++...+
T Consensus 208 ~pvl~~---~~l~~G~~V~~vgs~~p~~~El~~~~~ 240 (350)
T 1x7d_A 208 ATIITP---DMLEPGMHLNAVGGDCPGKTELHADVL 240 (350)
T ss_dssp EEEECG---GGCCTTCEEEECSCCBTTBEEECHHHH
T ss_pred CceecH---HHcCCCCEEEECCCCCCCceeeCHHHH
Confidence 34432 5678999999998753 34554433
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.01 E-value=3.6e-06 Score=71.14 Aligned_cols=39 Identities=21% Similarity=0.189 Sum_probs=31.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEe-CCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTE-IDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d-~~~~r 99 (243)
..++|+++|+|++ .||+.+|+.|...|++|++.+ ++..+
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~ 50 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPR 50 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSS
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 4689999999987 999999999999999999887 55444
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.00 E-value=6.9e-06 Score=72.63 Aligned_cols=40 Identities=25% Similarity=0.134 Sum_probs=35.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEe-CCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTE-IDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d-~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+|+.|...|++|++++ +++.++.
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~ 85 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN 85 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 679999999987 999999999999999999999 8877653
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.8e-05 Score=70.02 Aligned_cols=104 Identities=12% Similarity=0.087 Sum_probs=67.2
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCC---chhHHHHhh-----cCCc--cc---CH--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEID---LICALQALT-----EGIP--VL---TR-- 113 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~---~~r~~~a~~-----~G~~--~~---~~-- 113 (243)
++.++.+. +..+.|++++|+|+|++|++++..|...|+ +|++++++ ..+.....+ .+.. +. +.
T Consensus 135 f~~~L~~~-~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~ 213 (312)
T 3t4e_A 135 HIRAIKES-GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHA 213 (312)
T ss_dssp HHHHHHHT-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHH
T ss_pred HHHHHHhc-CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhh
Confidence 34454432 345789999999999999999999999999 89999999 554432221 1221 11 22
Q ss_pred -HhhhcCCcEEEEccCCh--hcccHH---HHccCCCCeEEEEecCCC
Q 037949 114 -EDVVSEAGLFVTTTENA--DIIMVR---HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 114 -~~~~~~aDvvi~a~G~~--~~i~~~---~l~~l~~g~~vvnvg~~~ 154 (243)
.+.+.++|+||+||+.. +.-... ..+.++++.+|..+-..+
T Consensus 214 ~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P 260 (312)
T 3t4e_A 214 FTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNP 260 (312)
T ss_dssp HHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSS
T ss_pred hHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCC
Confidence 34467899999997531 100000 124567788888765543
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.7e-05 Score=70.15 Aligned_cols=102 Identities=15% Similarity=0.152 Sum_probs=68.0
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCC---chhHHHHhh-----cCC--cccC------
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEID---LICALQALT-----EGI--PVLT------ 112 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~---~~r~~~a~~-----~G~--~~~~------ 112 (243)
++.++.+. +..+.|++++|+|+|++|++++..|...|+ +|++++++ ..+.....+ .+. .+.+
T Consensus 141 f~~~L~~~-~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~ 219 (315)
T 3tnl_A 141 YMRALKEA-GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQ 219 (315)
T ss_dssp HHHHHHHT-TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHH
T ss_pred HHHHHHHc-CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHH
Confidence 34444432 345789999999999999999999999999 89999999 555433221 122 1222
Q ss_pred HHhhhcCCcEEEEccCC--h-h----cccHHHHccCCCCeEEEEecCCC
Q 037949 113 REDVVSEAGLFVTTTEN--A-D----IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 113 ~~~~~~~aDvvi~a~G~--~-~----~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.+.+.++|+||+||+. . . .+. ..+.++++.+|..+-..+
T Consensus 220 l~~~l~~aDiIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P 266 (315)
T 3tnl_A 220 LRKEIAESVIFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKP 266 (315)
T ss_dssp HHHHHHTCSEEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSS
T ss_pred HHhhhcCCCEEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCC
Confidence 23446789999999742 1 1 121 234567888888766543
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.00 E-value=2.5e-06 Score=73.08 Aligned_cols=40 Identities=20% Similarity=0.220 Sum_probs=35.2
Q ss_pred ccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 60 ITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 60 ~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+.+.||+++|+|++ .||+.+|+.|...|++|+++++++..
T Consensus 25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~ 65 (271)
T 4iin_A 25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAE 65 (271)
T ss_dssp CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 35789999999986 99999999999999999999985543
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.99 E-value=1.2e-05 Score=68.53 Aligned_cols=40 Identities=33% Similarity=0.484 Sum_probs=36.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGV 45 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 578999999986 9999999999999999999999887643
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=97.99 E-value=2.7e-06 Score=73.64 Aligned_cols=43 Identities=26% Similarity=0.187 Sum_probs=38.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQA 103 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a 103 (243)
.++||+++|+|++ .||+.+|+.|...|++|+++++++.+....
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~ 56 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAA 56 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 4789999999986 899999999999999999999998876443
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.8e-05 Score=73.63 Aligned_cols=89 Identities=12% Similarity=0.051 Sum_probs=67.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc----CCc-ccCHHhhhcC---CcEEEEccCChhccc--
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE----GIP-VLTREDVVSE---AGLFVTTTENADIIM-- 134 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~----G~~-~~~~~~~~~~---aDvvi~a~G~~~~i~-- 134 (243)
.++.|||+|.+|..+|..+...|.+|+++|+++.+.+..... |+. ..++++.+.. +|+|+.|+.....+.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 569999999999999999999999999999998876554433 543 3456777665 999999987642221
Q ss_pred -HHHHccCCCCeEEEEecCC
Q 037949 135 -VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 135 -~~~l~~l~~g~~vvnvg~~ 153 (243)
.+....++++.+|++++.+
T Consensus 86 l~~l~~~l~~g~iiId~s~~ 105 (474)
T 2iz1_A 86 IKSLLPLLDIGDILIDGGNT 105 (474)
T ss_dssp HHHHGGGCCTTCEEEECSCC
T ss_pred HHHHHhhCCCCCEEEECCCC
Confidence 2234567889999987765
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.99 E-value=8.6e-06 Score=68.84 Aligned_cols=37 Identities=30% Similarity=0.437 Sum_probs=34.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~ 42 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT 42 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchh
Confidence 678999999986 9999999999999999999998865
|
| >3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.98 E-value=3.1e-05 Score=71.91 Aligned_cols=85 Identities=12% Similarity=0.040 Sum_probs=60.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHH--------HHhhcCC-------------c-ccCHHhhhcCCcE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICAL--------QALTEGI-------------P-VLTREDVVSEAGL 122 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~--------~a~~~G~-------------~-~~~~~~~~~~aDv 122 (243)
++|.|||+|.+|..+|..+...|.+|+++|+++++.. .+.+.|. . ..++ +.+++||+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl-~al~~aDl 133 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF-HKLSNCDL 133 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-GGCTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-HHHccCCE
Confidence 7899999999999999999999999999999988421 1223332 1 1233 35779999
Q ss_pred EEEccCChhcc----cHHHHccCCCCeEEEEe
Q 037949 123 FVTTTENADII----MVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 123 vi~a~G~~~~i----~~~~l~~l~~g~~vvnv 150 (243)
||+|+.....+ -.+..+.++++++++..
T Consensus 134 VIeAVpe~~~vk~~v~~~l~~~~~~~aIlasn 165 (460)
T 3k6j_A 134 IVESVIEDMKLKKELFANLENICKSTCIFGTN 165 (460)
T ss_dssp EEECCCSCHHHHHHHHHHHHTTSCTTCEEEEC
T ss_pred EEEcCCCCHHHHHHHHHHHHhhCCCCCEEEec
Confidence 99998653211 12334567899998743
|
| >3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.3e-05 Score=74.94 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=63.1
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-------------c-ccCHHhhhc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-------------P-VLTREDVVS 118 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-------------~-~~~~~~~~~ 118 (243)
-++|.|||+|.+|..+|..+...|.+|+++|+++++++.+.. .|. . ..+. +.++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDI-HALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCG-GGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCH-HHhc
Confidence 367999999999999999999999999999999988765432 232 0 1123 3567
Q ss_pred CCcEEEEccCChh-----cccHHHHccCCCCeEEE-EecC
Q 037949 119 EAGLFVTTTENAD-----IIMVRHMKQMKNAAIVC-NIGH 152 (243)
Q Consensus 119 ~aDvvi~a~G~~~-----~i~~~~l~~l~~g~~vv-nvg~ 152 (243)
++|+||+|+.... ++ .+..+.++++++++ |.+.
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~-~~l~~~~~~~~IlasntSt 122 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALF-AQLAEVCPPQTLLTTNTSS 122 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHH-HHHHHHSCTTCEEEECCSS
T ss_pred CCCEEEEcCCCcHHHHHHHH-HHHHHhhccCcEEEecCCC
Confidence 9999999986532 22 23345678898885 5543
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.98 E-value=8e-06 Score=70.38 Aligned_cols=42 Identities=21% Similarity=0.164 Sum_probs=35.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.+|+|+|+|++ .||+.+|+.|...|++|+++++++.+...
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~ 51 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHE 51 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 3679999999986 99999999999999999999999876544
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=97.98 E-value=5.1e-06 Score=71.71 Aligned_cols=40 Identities=28% Similarity=0.291 Sum_probs=34.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc-hhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL-ICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~-~r~ 100 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++ .++
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~ 61 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAA 61 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHH
Confidence 4689999999987 999999999999999999999987 544
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.4e-05 Score=66.40 Aligned_cols=39 Identities=23% Similarity=0.110 Sum_probs=34.7
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+++++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 43 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQ 43 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 47899999976 9999999999999999999999887653
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.97 E-value=2.3e-05 Score=61.36 Aligned_cols=69 Identities=14% Similarity=0.127 Sum_probs=50.1
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc-hhHHHH---hhcCCccc-----C---HHhh-hcCCcEEEEccCC
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL-ICALQA---LTEGIPVL-----T---REDV-VSEAGLFVTTTEN 129 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~-~r~~~a---~~~G~~~~-----~---~~~~-~~~aDvvi~a~G~ 129 (243)
..++++|+|+|.+|..+++.|...|.+|+++|+++ .+.... ...|..++ + +.++ +.++|+|+.+++.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 35789999999999999999999999999999985 432222 22354321 2 2233 6789999999887
Q ss_pred hh
Q 037949 130 AD 131 (243)
Q Consensus 130 ~~ 131 (243)
..
T Consensus 82 d~ 83 (153)
T 1id1_A 82 DA 83 (153)
T ss_dssp HH
T ss_pred hH
Confidence 53
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.97 E-value=2.4e-05 Score=68.55 Aligned_cols=84 Identities=14% Similarity=0.123 Sum_probs=62.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeC--CchhHHHHhhcCC-----------ccc---CHHhhhcCCcEEEEccCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEI--DLICALQALTEGI-----------PVL---TREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~--~~~r~~~a~~~G~-----------~~~---~~~~~~~~aDvvi~a~G~ 129 (243)
+++|+|+|.+|..+|..|...|.+|+++|+ ++.+.+.....|. .+. ++.+.+.++|+|+.|+..
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~ 81 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVST 81 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSCG
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCCh
Confidence 689999999999999999999999999999 8877655554443 222 345567899999999876
Q ss_pred hhc---ccHHHHccCCCCeEEEEec
Q 037949 130 ADI---IMVRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 130 ~~~---i~~~~l~~l~~g~~vvnvg 151 (243)
... +. +... ++++.+++++.
T Consensus 82 ~~~~~v~~-~i~~-l~~~~~vv~~~ 104 (335)
T 1txg_A 82 DGVLPVMS-RILP-YLKDQYIVLIS 104 (335)
T ss_dssp GGHHHHHH-HHTT-TCCSCEEEECC
T ss_pred HHHHHHHH-HHhc-CCCCCEEEEEc
Confidence 532 21 2234 67788888764
|
| >2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=1.1e-05 Score=73.39 Aligned_cols=81 Identities=19% Similarity=0.296 Sum_probs=66.0
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCC---EEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----Chhccc
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGA---RVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga---~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
+.-+|+|+|+ |.+|+..++.++.+|+ +|.+.|+++... |... +.+..+|+||.|.- .|.+++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~------g~~~----~~i~~aDivIn~vlig~~aP~Lvt 282 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR------GGPF----DEIPQADIFINCIYLSKPIAPFTN 282 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT------CSCC----THHHHSSEEEECCCCCSSCCCSCC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc------CCch----hhHhhCCEEEECcCcCCCCCcccC
Confidence 4568999999 9999999999999998 899999876321 3221 34568999999963 467899
Q ss_pred HHHHccC-CCCeEEEEecCC
Q 037949 135 VRHMKQM-KNAAIVCNIGHF 153 (243)
Q Consensus 135 ~~~l~~l-~~g~~vvnvg~~ 153 (243)
.+.++.| |++.+|+.++.-
T Consensus 283 ~e~v~~m~k~gsVIVDVA~D 302 (394)
T 2qrj_A 283 MEKLNNPNRRLRTVVDVSAD 302 (394)
T ss_dssp HHHHCCTTCCCCEEEETTCC
T ss_pred HHHHhcCcCCCeEEEEEecC
Confidence 9999999 999999998753
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.97 E-value=7.4e-06 Score=70.28 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=37.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~ 69 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKA 69 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence 4789999999987 99999999999999999999999877544
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=97.96 E-value=2.6e-05 Score=72.42 Aligned_cols=89 Identities=16% Similarity=0.143 Sum_probs=64.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhC--CCEEEEEeCCchhHHHHhh-------------------cCCcc-cCHHhhhcCCcE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAV--GARVMGTEIDLICALQALT-------------------EGIPV-LTREDVVSEAGL 122 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~--Ga~V~v~d~~~~r~~~a~~-------------------~G~~~-~~~~~~~~~aDv 122 (243)
.++.|+|+|.+|..+|..|... |.+|+++|+++.+.+.... .+... .++.+.+.++|+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 4799999999999999999988 7899999999987644221 12222 345667788999
Q ss_pred EEEccCChhccc-----------------HHHHccCCCCeEEEEecCC
Q 037949 123 FVTTTENADIIM-----------------VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 123 vi~a~G~~~~i~-----------------~~~l~~l~~g~~vvnvg~~ 153 (243)
|+.|++++...+ ......++++.+|++.+..
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv 133 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTV 133 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcC
Confidence 999987654211 1234567889999987654
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.96 E-value=2.1e-05 Score=67.34 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=36.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~ 70 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIE 70 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHH
Confidence 3689999999976 9999999999999999999999887643
|
| >1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A | Back alignment and structure |
|---|
Probab=97.96 E-value=3.3e-06 Score=77.64 Aligned_cols=95 Identities=16% Similarity=0.197 Sum_probs=57.8
Q ss_pred ccc-ccCcEEEEEcCChHHHHHHHHHHh-CCCEEEEE-eCCchhHHHHhhcCCcccCHHhhhc---CCcEEEEccCChhc
Q 037949 59 DIT-IAGKIAVDCGHGDVGRGCAAALKA-VGARVMGT-EIDLICALQALTEGIPVLTREDVVS---EAGLFVTTTENADI 132 (243)
Q Consensus 59 ~~~-l~g~~vlViG~G~IG~~~A~~l~~-~Ga~V~v~-d~~~~r~~~a~~~G~~~~~~~~~~~---~aDvvi~a~G~~~~ 132 (243)
+.. +.|++|+|+|+|.||+.+|+.+++ +|++|+.+ |.+.... ...| ++++++.+ ..+.+.....+.+
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~~---~~~g---vdl~~L~~~~d~~~~l~~l~~t~~- 278 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIY---NPDG---LNADEVLKWKNEHGSVKDFPGATN- 278 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEE---EEEE---ECHHHHHHHHHHHSSSTTCTTSEE-
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCcccc---CccC---CCHHHHHHHHHhcCEeecCccCee-
Confidence 445 889999999999999999999999 99999877 5542100 0011 12222211 1111111112334
Q ss_pred ccHHHHccCCCCeEEEEecCCCCCCChhHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFDNEIDMLDL 162 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~~~id~~~l 162 (243)
++.+.|..|++ .+++|++++. .+|.+++
T Consensus 279 i~~~~l~~mk~-dilIn~ArG~-~Vde~a~ 306 (419)
T 1gtm_A 279 ITNEELLELEV-DVLAPAAIEE-VITKKNA 306 (419)
T ss_dssp ECHHHHHHSCC-SEEEECSCSC-CBCTTGG
T ss_pred eCHHHHHhCCC-CEEEECCCcc-cCCHHHH
Confidence 55566777776 4888888875 3565554
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.95 E-value=2.4e-05 Score=65.28 Aligned_cols=41 Identities=29% Similarity=0.387 Sum_probs=36.4
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.++|++++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 45 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV 45 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3678999999985 9999999999999999999999887653
|
| >3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=1.9e-05 Score=70.01 Aligned_cols=85 Identities=18% Similarity=0.152 Sum_probs=59.8
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-----------hcCC-----c----------ccCHHhhh
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-----------TEGI-----P----------VLTREDVV 117 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-----------~~G~-----~----------~~~~~~~~ 117 (243)
-.+|.|+|+|.+|..+|..+...|.+|+++|++++.+..+. ..|. . +.++.+++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 46899999999999999999999999999999988654332 1121 0 12345677
Q ss_pred cCCcEEEEccCCh-----hcccHHHHccCCCCeEEEE
Q 037949 118 SEAGLFVTTTENA-----DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 118 ~~aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vvn 149 (243)
+++|+|+||.--. .++. +.=..+++++++..
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~-~l~~~~~~~aIlaS 121 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFA-QLDSIVDDRVVLSS 121 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHH-HHHTTCCSSSEEEE
T ss_pred ccCcEEeeccccHHHHHHHHHH-HHHHHhhhcceeeh
Confidence 8999999996432 2232 22244578888874
|
| >2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=3.1e-05 Score=72.22 Aligned_cols=89 Identities=10% Similarity=0.061 Sum_probs=67.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----cCCc-ccCHHhhh---cCCcEEEEccCChhccc-
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----EGIP-VLTREDVV---SEAGLFVTTTENADIIM- 134 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----~G~~-~~~~~~~~---~~aDvvi~a~G~~~~i~- 134 (243)
.+|.|||+|.+|..+|..+...|.+|+++|+++.+.+.... .|+. ..++++++ +.+|+|+.|+.....+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 36999999999999999999999999999999988765554 4554 34566765 48999999987642221
Q ss_pred --HHHHccCCCCeEEEEecCC
Q 037949 135 --VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 135 --~~~l~~l~~g~~vvnvg~~ 153 (243)
.+....++++.+|++++-+
T Consensus 83 vl~~l~~~l~~g~iII~~s~~ 103 (482)
T 2pgd_A 83 FIEKLVPLLDIGDIIIDGGNS 103 (482)
T ss_dssp HHHHHHHHCCTTCEEEECSCC
T ss_pred HHHHHHhhcCCCCEEEECCCC
Confidence 1234567889999987655
|
| >2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=9e-05 Score=68.37 Aligned_cols=113 Identities=16% Similarity=0.096 Sum_probs=76.8
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEe----CC----ch-h---HH-----HHhhcCC--
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTE----ID----LI-C---AL-----QALTEGI-- 108 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d----~~----~~-r---~~-----~a~~~G~-- 108 (243)
+.+++.. +..+.+++++|+|+|..|++++..|...|+ +|+++| ++ .. . +. .+.....
T Consensus 174 ~~AL~~~-g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~ 252 (439)
T 2dvm_A 174 LNALKVV-GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGEN 252 (439)
T ss_dssp HHHHHHH-TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTC
T ss_pred HHHHHHh-CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhcccccc
Confidence 3444332 335789999999999999999999999998 799999 66 22 1 10 0111111
Q ss_pred cccCHHhhhcCCcEEEEccCCh-hcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 109 PVLTREDVVSEAGLFVTTTENA-DIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 109 ~~~~~~~~~~~aDvvi~a~G~~-~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
...++.+.++++|++|.+|+.+ +++..+.++.|+++.+|..+.....+........
T Consensus 253 ~~~~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDLynP~~t~~~~~A~~ 309 (439)
T 2dvm_A 253 IEGGPQEALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANPVPEILPEEAKK 309 (439)
T ss_dssp CCSSHHHHHTTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEECCSSSCSSCHHHHHH
T ss_pred ccccHHHHhccCCEEEEcCCCccCCCChHHHHhcCCCCEEEECCCCCCcchHHHHHH
Confidence 1234677788999999999874 6776667888998998888833323444444444
|
| >1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.95 E-value=2.6e-05 Score=72.46 Aligned_cols=85 Identities=21% Similarity=0.209 Sum_probs=60.7
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cC-----------Ccc-cCHHhhhcCC
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EG-----------IPV-LTREDVVSEA 120 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G-----------~~~-~~~~~~~~~a 120 (243)
-++|.|+|+|.+|..+|..+...|.+|+++|+++.+++.+.. .| ..+ .+. +.+.++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 468999999999999999999999999999999887654332 11 011 233 456789
Q ss_pred cEEEEccCChhc----ccHHHHccCCCCeEEEE
Q 037949 121 GLFVTTTENADI----IMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 121 Dvvi~a~G~~~~----i~~~~l~~l~~g~~vvn 149 (243)
|+||+|+..... +-.+.-..++++.+++.
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 999999865321 11123345688888875
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=97.94 E-value=3.8e-05 Score=71.11 Aligned_cols=88 Identities=13% Similarity=0.142 Sum_probs=66.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-------------------C-Cc-ccCHHhhhcCCcEE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-------------------G-IP-VLTREDVVSEAGLF 123 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-------------------G-~~-~~~~~~~~~~aDvv 123 (243)
-++.|+|.|.+|..+|..|...|.+|+++|+++.+.+..... | .. +.++.++++++|++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 479999999999999999999999999999999986443321 1 12 23456778899999
Q ss_pred EEccCChh----------ccc---HHHHccCCCCeEEEEecC
Q 037949 124 VTTTENAD----------IIM---VRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 124 i~a~G~~~----------~i~---~~~l~~l~~g~~vvnvg~ 152 (243)
|.|++++. .+. ....+.++++.+||+.+-
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ST 130 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKST 130 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSC
T ss_pred EEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 99977653 121 123467889999998763
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.94 E-value=1.1e-05 Score=68.42 Aligned_cols=40 Identities=33% Similarity=0.380 Sum_probs=36.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 43 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLR 43 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999976 9999999999999999999999887653
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=7.9e-06 Score=69.08 Aligned_cols=41 Identities=22% Similarity=0.237 Sum_probs=36.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.+++++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 50 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE 50 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHH
Confidence 4689999999986 9999999999999999999999876653
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.93 E-value=3.8e-05 Score=63.85 Aligned_cols=69 Identities=14% Similarity=0.121 Sum_probs=51.9
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-ccc--C----HHhhhcCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-PVL--T----REDVVSEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~~~--~----~~~~~~~aDvvi~a~G~ 129 (243)
.+.|++|+|+|+ |.||+.+++.|...|++|+++++++.+.......++ .++ + +.+.+.++|+||.+.|.
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence 478999999998 799999999999999999999999887655444455 321 2 23456688998888764
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.6e-05 Score=67.03 Aligned_cols=40 Identities=30% Similarity=0.572 Sum_probs=36.1
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.+++++|+|++ .||+.+++.|...|++|+++++++.+.
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~ 50 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMA 50 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4679999999976 999999999999999999999987654
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=97.93 E-value=7.9e-06 Score=68.52 Aligned_cols=40 Identities=28% Similarity=0.294 Sum_probs=35.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++|++++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 44 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGE 44 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999976 9999999999999999999999887543
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.93 E-value=3.9e-06 Score=71.67 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=34.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+.+|+++|+|++ .||+.+|+.|...|++|+++++++.+
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 64 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP 64 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 578999999986 89999999999999999999998654
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.92 E-value=1.4e-05 Score=68.51 Aligned_cols=88 Identities=20% Similarity=0.174 Sum_probs=63.0
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhc-CC-cccCHHhhhcCCcEEEEccCC--h---hcc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTE-GI-PVLTREDVVSEAGLFVTTTEN--A---DII 133 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~-G~-~~~~~~~~~~~aDvvi~a~G~--~---~~i 133 (243)
++| +++|+|+|.+|++++..|...|+ +|+++++++++.+..... +. ...++.+.+.++|+||.|++. . ..+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~i 185 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELPV 185 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCSC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCCC
Confidence 578 99999999999999999999999 899999998875332211 11 123345667899999999742 1 123
Q ss_pred cHHHHccCCCCeEEEEecCC
Q 037949 134 MVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~ 153 (243)
.. +.++++.+|+.+...
T Consensus 186 ~~---~~l~~~~~V~Divy~ 202 (253)
T 3u62_A 186 SD---DSLKNLSLVYDVIYF 202 (253)
T ss_dssp CH---HHHTTCSEEEECSSS
T ss_pred CH---HHhCcCCEEEEeeCC
Confidence 32 235678888876654
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.92 E-value=3e-06 Score=70.38 Aligned_cols=37 Identities=16% Similarity=0.030 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+.+|+++|+|++ .||+.+|+.|...|++|+++++++.
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~ 41 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG 41 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc
Confidence 578999999986 9999999999999999999987654
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.92 E-value=3.9e-06 Score=80.59 Aligned_cols=35 Identities=31% Similarity=0.543 Sum_probs=31.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
.+.||+++|+|++ +||+.+|+.|...|++|+++|+
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r 51 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDL 51 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 5789999999987 8999999999999999999987
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=1.6e-05 Score=65.36 Aligned_cols=85 Identities=19% Similarity=0.153 Sum_probs=60.6
Q ss_pred EEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-C-------CcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 66 IAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-G-------IPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 66 ~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G-------~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
+++|+| +|.+|..++..+...|.+|+++|+++.+....... + ....+..+.++++|+|+.|+.... +. +
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~~~-~~-~ 79 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEH-AI-D 79 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHH-HH-H
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCChhh-HH-H
Confidence 689999 99999999999999999999999998765433321 2 222345566788999999986433 21 2
Q ss_pred HH----ccCCCCeEEEEecCC
Q 037949 137 HM----KQMKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l----~~l~~g~~vvnvg~~ 153 (243)
.+ ..+ ++.++++++.+
T Consensus 80 ~~~~l~~~~-~~~~vi~~~~g 99 (212)
T 1jay_A 80 TARDLKNIL-REKIVVSPLVP 99 (212)
T ss_dssp HHHHTHHHH-TTSEEEECCCC
T ss_pred HHHHHHHHc-CCCEEEEcCCC
Confidence 22 233 37888887753
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=97.91 E-value=5.3e-06 Score=70.91 Aligned_cols=37 Identities=19% Similarity=0.203 Sum_probs=31.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.+|+++|+|++ .||+.+|+.|...|++|++++++.
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~ 59 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSER 59 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSC
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCc
Confidence 4678999999986 999999999999999999998543
|
| >1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.91 E-value=4.3e-05 Score=67.50 Aligned_cols=84 Identities=15% Similarity=0.124 Sum_probs=63.1
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC-----------Ccc-cCHHhhhcCCcEEEEccCChhc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG-----------IPV-LTREDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G-----------~~~-~~~~~~~~~aDvvi~a~G~~~~ 132 (243)
-++.|+|+|.+|..++..|...|.+|+++++++++.+.....| +.+ .++.+ +..+|+||.|+... .
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~~-~ 92 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPVQ-Y 92 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCGG-G
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCHH-H
Confidence 5799999999999999999999999999999988765444444 222 34556 77899999998753 3
Q ss_pred ccHHHHccCC-CCeEEEEec
Q 037949 133 IMVRHMKQMK-NAAIVCNIG 151 (243)
Q Consensus 133 i~~~~l~~l~-~g~~vvnvg 151 (243)
+. +.+..++ ++.+++++.
T Consensus 93 ~~-~v~~~l~~~~~~vv~~~ 111 (335)
T 1z82_A 93 IR-EHLLRLPVKPSMVLNLS 111 (335)
T ss_dssp HH-HHHTTCSSCCSEEEECC
T ss_pred HH-HHHHHhCcCCCEEEEEe
Confidence 33 4565555 677787765
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.91 E-value=9.8e-06 Score=71.64 Aligned_cols=35 Identities=34% Similarity=0.422 Sum_probs=30.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
+.+|+++|+|++ .||+.+|+.|...|++|++++++
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~ 38 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRD 38 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCc
Confidence 468999999986 99999999999999999998776
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.90 E-value=2e-05 Score=65.28 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=53.5
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhc---ccH
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADI---IMV 135 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~---i~~ 135 (243)
+..+...++.|+|+|.+|..+|..+...|.+|+++|+++. .++++|+|+.|+..... +.
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------~~~~aD~vi~av~~~~~~~v~~- 75 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------ATTLGEIVIMAVPYPALAALAK- 75 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------CSSCCSEEEECSCHHHHHHHHH-
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------HhccCCEEEEcCCcHHHHHHHH-
Confidence 4456788999999999999999999999999999998765 24578999999863321 21
Q ss_pred HHHccCCCCeEEEEecCC
Q 037949 136 RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~ 153 (243)
+....++ +.++++++.+
T Consensus 76 ~l~~~~~-~~~vi~~~~g 92 (209)
T 2raf_A 76 QYATQLK-GKIVVDITNP 92 (209)
T ss_dssp HTHHHHT-TSEEEECCCC
T ss_pred HHHHhcC-CCEEEEECCC
Confidence 1123345 7888887653
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=1.3e-05 Score=67.57 Aligned_cols=39 Identities=23% Similarity=0.242 Sum_probs=34.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC-CchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEI-DLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~-~~~r~ 100 (243)
+.|++++|+|+. .||+.+++.|...|++|+++++ ++.+.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 45 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEA 45 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHH
Confidence 678999999976 9999999999999999999999 65543
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.89 E-value=3.4e-05 Score=64.33 Aligned_cols=87 Identities=14% Similarity=0.075 Sum_probs=62.5
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEE-EeCCchhHHHHh-hcCCcc-cCHHhhhcCCcEEEEccCChhcccHHHHcc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMG-TEIDLICALQAL-TEGIPV-LTREDVVSEAGLFVTTTENADIIMVRHMKQ 140 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v-~d~~~~r~~~a~-~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~ 140 (243)
-.+++|+|+|.+|..++..+...|.+|++ +|++++++.... ..|... .+..+.+.++|+|+.|+... .+. +.+..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~-~~~-~v~~~ 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYD-SIA-DIVTQ 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGG-GHH-HHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChH-HHH-HHHHH
Confidence 46899999999999999999999999988 999998765533 346542 33445578899999997532 222 34444
Q ss_pred C--CCCeEEEEecC
Q 037949 141 M--KNAAIVCNIGH 152 (243)
Q Consensus 141 l--~~g~~vvnvg~ 152 (243)
+ .++.+++++.-
T Consensus 101 l~~~~~~ivi~~~~ 114 (220)
T 4huj_A 101 VSDWGGQIVVDASN 114 (220)
T ss_dssp CSCCTTCEEEECCC
T ss_pred hhccCCCEEEEcCC
Confidence 4 24667777653
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=97.88 E-value=2.2e-05 Score=66.56 Aligned_cols=41 Identities=12% Similarity=0.148 Sum_probs=36.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.+++++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~ 52 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELN 52 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4689999999976 9999999999999999999999877643
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.88 E-value=4.2e-05 Score=68.66 Aligned_cols=88 Identities=13% Similarity=0.037 Sum_probs=65.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC--------------c-ccCHHhhhcCCcEEEEccC
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI--------------P-VLTREDVVSEAGLFVTTTE 128 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~--------------~-~~~~~~~~~~aDvvi~a~G 128 (243)
-.++.|+|+|.+|..+|..|...|.+|.++|+++.+.+.....+. . ..++.+++.++|+|+.|+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 357999999999999999999999999999999887654443331 1 1245677889999999986
Q ss_pred Chh---cccHHHHccCCCCeEEEEecC
Q 037949 129 NAD---IIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 129 ~~~---~i~~~~l~~l~~g~~vvnvg~ 152 (243)
... ++. +....++++.+++++.-
T Consensus 109 ~~~~~~vl~-~i~~~l~~~~ivvs~~k 134 (356)
T 3k96_A 109 SFAFHEVIT-RMKPLIDAKTRIAWGTK 134 (356)
T ss_dssp HHHHHHHHH-HHGGGCCTTCEEEECCC
T ss_pred HHHHHHHHH-HHHHhcCCCCEEEEEeC
Confidence 542 232 23455678888887654
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=97.88 E-value=6.2e-06 Score=69.85 Aligned_cols=38 Identities=11% Similarity=0.028 Sum_probs=33.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.-+|+++|+|++ .||+.+|+.|...|++|+++++++.+
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~ 58 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP 58 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 458999999986 89999999999999999999998765
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=97.87 E-value=4.4e-05 Score=71.23 Aligned_cols=91 Identities=15% Similarity=0.039 Sum_probs=65.4
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhC-CC-EEEEEeCCch----hHHHHhh---------------------cC-CcccCHH
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAV-GA-RVMGTEIDLI----CALQALT---------------------EG-IPVLTRE 114 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~-Ga-~V~v~d~~~~----r~~~a~~---------------------~G-~~~~~~~ 114 (243)
+-.+|.|+|+|.+|..+|..+... |. +|+++|+++. +.+.... .| ....+..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~ 96 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDF 96 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCG
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcH
Confidence 346899999999999999999999 99 9999999998 6533322 11 1111124
Q ss_pred hhhcCCcEEEEccCChhc-----------c---cHHHHccCCCCeEEEEecCC
Q 037949 115 DVVSEAGLFVTTTENADI-----------I---MVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 115 ~~~~~aDvvi~a~G~~~~-----------i---~~~~l~~l~~g~~vvnvg~~ 153 (243)
+++.++|+||.|++++.. + .....+.++++.+||+.+..
T Consensus 97 ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv 149 (478)
T 3g79_A 97 SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTI 149 (478)
T ss_dssp GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCC
T ss_pred HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCC
Confidence 567789999999887531 1 12235668899999987744
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=4.9e-05 Score=70.88 Aligned_cols=87 Identities=15% Similarity=0.152 Sum_probs=64.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC--------------------c-ccCHHhhhcCCcEE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI--------------------P-VLTREDVVSEAGLF 123 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~--------------------~-~~~~~~~~~~aDvv 123 (243)
.++.|+|+|.+|..+|..|...|.+|+++|+++.+.+.....+. . +.++.+.+.++|++
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDvv 88 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQ 88 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSEE
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCEE
Confidence 57999999999999999999999999999999988654443211 1 12344566789999
Q ss_pred EEccCCh---------hccc---HHHHccCCCCeEEEEec
Q 037949 124 VTTTENA---------DIIM---VRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 124 i~a~G~~---------~~i~---~~~l~~l~~g~~vvnvg 151 (243)
|.|++++ ..+. ......++++.+|++.+
T Consensus 89 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 89 FIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred EEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 9998774 2222 12234578899998876
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=97.86 E-value=9.5e-06 Score=68.03 Aligned_cols=36 Identities=31% Similarity=0.256 Sum_probs=33.4
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+|+++|+|++ .||+.+++.|...|++|+++++++.+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~ 38 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE 38 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 6899999986 99999999999999999999998875
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=97.86 E-value=1.5e-05 Score=68.65 Aligned_cols=41 Identities=27% Similarity=0.298 Sum_probs=36.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.|++++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~ 66 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQ 66 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 3689999999985 9999999999999999999999987653
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=1.4e-05 Score=67.04 Aligned_cols=40 Identities=30% Similarity=0.488 Sum_probs=36.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.|++++|+|++ .||+.+++.|...|++|+++++++.+.
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~ 48 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA 48 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 4689999999975 999999999999999999999987654
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=5.3e-06 Score=69.68 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=34.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
..+|+++|+|++ .||+.+++.|...|++|+++++++.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 43 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE 43 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhh
Confidence 568999999986 99999999999999999999998764
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=2.7e-05 Score=85.23 Aligned_cols=100 Identities=16% Similarity=0.122 Sum_probs=74.6
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCCc-ccC-----HHhhh--
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALT----EGIP-VLT-----REDVV-- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~~-~~~-----~~~~~-- 117 (243)
++++.+... ..+|++|+|.|+ |+||+.+++.++..|++|++++.++.+.+.+.. .|.+ +.+ +.+.+
T Consensus 1656 ~~al~~~a~-l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~ 1734 (2512)
T 2vz8_A 1656 YYSLVVRGR-MQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLR 1734 (2512)
T ss_dssp HHHHTTTTC-CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHH
T ss_pred HHHHHHHhc-CCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHH
Confidence 455543322 468999999986 999999999999999999999988887766664 4543 221 22221
Q ss_pred ----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 ----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|+|++|+| ...+. ..++.++++|+++.+|..
T Consensus 1735 ~t~g~GvDvVld~~g-~~~l~-~~l~~L~~~Gr~V~iG~~ 1772 (2512)
T 2vz8_A 1735 HTAGKGVDLVLNSLA-EEKLQ-ASVRCLAQHGRFLEIGKF 1772 (2512)
T ss_dssp TTTSCCEEEEEECCC-HHHHH-HHHTTEEEEEEEEECCCH
T ss_pred hcCCCCceEEEECCC-chHHH-HHHHhcCCCcEEEEeecc
Confidence 36899999987 45564 579999999999998853
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.84 E-value=2.3e-05 Score=65.19 Aligned_cols=39 Identities=21% Similarity=0.186 Sum_probs=34.9
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCC--CEEEEEeCCchhHH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVG--ARVMGTEIDLICAL 101 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~G--a~V~v~d~~~~r~~ 101 (243)
++++++|+|++ .||+.+++.|...| ++|+++++++.+..
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~ 43 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT 43 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH
Confidence 57899999976 99999999999999 99999999887653
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=3.4e-05 Score=70.68 Aligned_cols=86 Identities=14% Similarity=0.182 Sum_probs=63.1
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C---H---Hhh-hcCCcEEEEccCChhc--
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T---R---EDV-VSEAGLFVTTTENADI-- 132 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~---~---~~~-~~~aDvvi~a~G~~~~-- 132 (243)
+.+|+|+|+|.+|+.+++.|+..|.+|+++|.|+.+...+...|+.++ + . .++ +..||+|+.|+++...
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 467999999999999999999999999999999999877777787543 2 1 222 5689999999887542
Q ss_pred ccHHHHccCCCCeEEEE
Q 037949 133 IMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvn 149 (243)
.-......+.+...++.
T Consensus 84 ~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 84 QLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp HHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHhCCCCeEEE
Confidence 11123444556644443
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=1.5e-05 Score=68.81 Aligned_cols=41 Identities=24% Similarity=0.418 Sum_probs=36.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.|++++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~ 64 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLK 64 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4689999999976 9999999999999999999999987653
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=6.6e-05 Score=64.97 Aligned_cols=68 Identities=28% Similarity=0.222 Sum_probs=49.5
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----cCCc-----ccCH---HhhhcCCcEEEEc
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----EGIP-----VLTR---EDVVSEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----~G~~-----~~~~---~~~~~~aDvvi~a 126 (243)
.++|++++|+| +|+||+.++..|...|++|+++++++.+...... .+.. +.+. .+.++.+|++|.+
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ 195 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA 195 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence 46899999999 8999999999999999999999999876533221 1221 1121 2345567888887
Q ss_pred cC
Q 037949 127 TE 128 (243)
Q Consensus 127 ~G 128 (243)
+|
T Consensus 196 ag 197 (287)
T 1lu9_A 196 GA 197 (287)
T ss_dssp CC
T ss_pred CC
Confidence 75
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=3.2e-05 Score=64.86 Aligned_cols=41 Identities=24% Similarity=0.320 Sum_probs=36.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.|++++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~ 49 (254)
T 2wsb_A 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALD 49 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3689999999986 9999999999999999999999887653
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=97.82 E-value=7.8e-06 Score=68.75 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=32.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHh-CCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKA-VGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~-~Ga~V~v~d~~~~ 98 (243)
.++|+++|+|++ .||+.+|+.|.. .|++|+++++++.
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~ 40 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQS 40 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccc
Confidence 368999999987 999999999998 7889999988765
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.82 E-value=1.3e-05 Score=68.96 Aligned_cols=41 Identities=22% Similarity=0.192 Sum_probs=36.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.+++++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~ 82 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD 82 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 4678999999976 9999999999999999999998876543
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.5e-05 Score=67.31 Aligned_cols=41 Identities=27% Similarity=0.470 Sum_probs=36.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
+.+++++|+|++ .||+.+++.|...|++|+++++++.+...
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~ 46 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQE 46 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence 578999999976 99999999999999999999999876543
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.81 E-value=1.3e-05 Score=67.35 Aligned_cols=41 Identities=20% Similarity=0.089 Sum_probs=33.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQA 103 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a 103 (243)
+.||+++|+|++ .||+.+|+.|.. |++|+++++++.++...
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~ 44 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAAL 44 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHH
Confidence 578999999987 899999999987 99999999998776443
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=97.81 E-value=6.5e-06 Score=69.31 Aligned_cols=40 Identities=30% Similarity=0.275 Sum_probs=33.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-eCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGT-EIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d~~~~r~ 100 (243)
.+.||+++|+|++ .||+.+++.|...|++|++. ++++.+.
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~ 45 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA 45 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHH
Confidence 4689999999986 99999999999999999885 5555543
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.81 E-value=5.5e-06 Score=69.29 Aligned_cols=37 Identities=14% Similarity=0.161 Sum_probs=33.9
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+||+++|+|++ .||+.+++.|...|++|+++++++.+
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~ 39 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND 39 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 57899999976 99999999999999999999998764
|
| >1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.81 E-value=4.7e-05 Score=70.99 Aligned_cols=88 Identities=13% Similarity=0.073 Sum_probs=65.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-C-------Cc-ccCHHhhhc---CCcEEEEccCChhcc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-G-------IP-VLTREDVVS---EAGLFVTTTENADII 133 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G-------~~-~~~~~~~~~---~aDvvi~a~G~~~~i 133 (243)
+|.|+|+|.+|..+|..+...|.+|+++|+++++.+..... | .. ..++++++. .+|+|+.|+.....+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v 82 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT 82 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHHH
Confidence 58999999999999999999999999999998876554433 5 32 235666665 599999998764222
Q ss_pred c---HHHHccCCCCeEEEEecCC
Q 037949 134 M---VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 134 ~---~~~l~~l~~g~~vvnvg~~ 153 (243)
. .+....++++.+|++.+-+
T Consensus 83 ~~vl~~l~~~l~~g~iIId~sng 105 (478)
T 1pgj_A 83 DSTIEQLKKVFEKGDILVDTGNA 105 (478)
T ss_dssp HHHHHHHHHHCCTTCEEEECCCC
T ss_pred HHHHHHHHhhCCCCCEEEECCCC
Confidence 1 2234567889999987655
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=97.80 E-value=1.4e-05 Score=67.83 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=34.7
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+++|+|++ .||+.+|+.|...|++|+++++++..
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~ 58 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQ 58 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSS
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcch
Confidence 4689999999986 89999999999999999999887654
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=97.80 E-value=1.5e-05 Score=68.19 Aligned_cols=40 Identities=25% Similarity=0.241 Sum_probs=35.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.+|+++|+|++ .||+.+++.|...|++|+++++++.+.
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 71 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPAD 71 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 3689999999976 899999999999999999999987654
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.80 E-value=3.1e-05 Score=64.81 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=34.1
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+|+++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 40 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLE 40 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 6899999975 9999999999999999999999887653
|
| >1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=6.5e-05 Score=68.44 Aligned_cols=85 Identities=16% Similarity=0.067 Sum_probs=61.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc------------------c-cCHHhhhcCCcEEEEc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP------------------V-LTREDVVSEAGLFVTT 126 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~------------------~-~~~~~~~~~aDvvi~a 126 (243)
++.|+|+|.+|..+|..|.. |.+|+++|+++.+.+.....+.. . .+..+.+.++|+++.|
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvviia 80 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVIIA 80 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEEe
Confidence 68999999999999999998 99999999999887554443431 1 2344567789999999
Q ss_pred cCChh----------ccc---HHHHccCCCCeEEEEecC
Q 037949 127 TENAD----------IIM---VRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 127 ~G~~~----------~i~---~~~l~~l~~g~~vvnvg~ 152 (243)
++++. .+. ..... ++++.+|+..+.
T Consensus 81 vpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST 118 (402)
T 1dlj_A 81 TPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKST 118 (402)
T ss_dssp CCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSC
T ss_pred cCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCC
Confidence 87762 121 12234 678888887443
|
| >3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00014 Score=66.95 Aligned_cols=90 Identities=13% Similarity=0.207 Sum_probs=64.2
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-ccc--CHHh---------------hhcCCcEEE
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-PVL--TRED---------------VVSEAGLFV 124 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~~~--~~~~---------------~~~~aDvvi 124 (243)
.|.+.-|+|.|-+|+.+|..|...|.+|+++|+++++.+... .|. ... .+++ .+.++|++|
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~-~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQ-NGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-TTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-CCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 588999999999999999999999999999999999864433 332 111 1111 134799999
Q ss_pred EccCChhc-----------cc---HHHHccCCCCeEEEEecCC
Q 037949 125 TTTENADI-----------IM---VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 125 ~a~G~~~~-----------i~---~~~l~~l~~g~~vvnvg~~ 153 (243)
.|++++.. +. ....+.++++.+||+.+..
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV 131 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTI 131 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCC
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 99887652 11 2235668999999987643
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=1.6e-05 Score=70.04 Aligned_cols=36 Identities=28% Similarity=0.508 Sum_probs=32.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|++ .||+.+|+.|...|++|++.|++
T Consensus 6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~ 42 (319)
T 1gz6_A 6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLG 42 (319)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4689999999987 99999999999999999998764
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=3.2e-05 Score=63.64 Aligned_cols=90 Identities=14% Similarity=0.069 Sum_probs=59.5
Q ss_pred CcEEEEEcC-ChHHHHHHHHHH-hCCCEEEEEeCCch-hHHHH--hhcCCc-----ccCH---HhhhcCCcEEEEccCCh
Q 037949 64 GKIAVDCGH-GDVGRGCAAALK-AVGARVMGTEIDLI-CALQA--LTEGIP-----VLTR---EDVVSEAGLFVTTTENA 130 (243)
Q Consensus 64 g~~vlViG~-G~IG~~~A~~l~-~~Ga~V~v~d~~~~-r~~~a--~~~G~~-----~~~~---~~~~~~aDvvi~a~G~~ 130 (243)
.|+++|+|+ |.||+.+++.|. ..|++|+++++++. ++... ...++. +.+. .++++++|++|.+.|..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 367999996 799999999999 89999999999987 64332 112222 2222 34567899999998753
Q ss_pred hcccHHHHccCC--CCeEEEEecCC
Q 037949 131 DIIMVRHMKQMK--NAAIVCNIGHF 153 (243)
Q Consensus 131 ~~i~~~~l~~l~--~g~~vvnvg~~ 153 (243)
..-....++.|+ ..+++|+++..
T Consensus 85 n~~~~~~~~~~~~~~~~~iv~iSs~ 109 (221)
T 3r6d_A 85 GSDMASIVKALSRXNIRRVIGVSMA 109 (221)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred ChhHHHHHHHHHhcCCCeEEEEeec
Confidence 211222344442 23578877654
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.76 E-value=1.9e-05 Score=66.93 Aligned_cols=38 Identities=18% Similarity=0.003 Sum_probs=33.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+.+|+++|+|++ .||+.+++.|...|++|+++++++..
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~ 43 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTT 43 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChH
Confidence 467999999986 89999999999999999998776554
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=97.75 E-value=1.5e-05 Score=66.66 Aligned_cols=39 Identities=23% Similarity=0.320 Sum_probs=33.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-eCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGT-EIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d~~~~r~ 100 (243)
++|++++|+|++ .||+.+++.|...|++|+++ ++++.+.
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~ 43 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSL 43 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHH
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHH
Confidence 578999999976 99999999999999999998 5665543
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=5.2e-05 Score=64.43 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=35.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.+++++|+|++ .||+.+++.|...|++|+++++++.+.
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~ 53 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHG 53 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHH
Confidence 3679999999976 999999999999999999999987654
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=97.74 E-value=1.5e-05 Score=70.33 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=31.4
Q ss_pred CcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 64 GKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 64 g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+|+++|+|+| +||+.+|+.|...|++|+++++++
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~ 38 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP 38 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence 7899999987 799999999999999999888776
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0002 Score=58.58 Aligned_cols=87 Identities=14% Similarity=0.093 Sum_probs=60.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc--cCH----HhhhcCCcEEEEccCCh--------
Q 037949 66 IAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV--LTR----EDVVSEAGLFVTTTENA-------- 130 (243)
Q Consensus 66 ~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~--~~~----~~~~~~aDvvi~a~G~~-------- 130 (243)
+|+|+|+ |.||+.+++.|...|.+|+++++++.+.......+++. .++ .+.+.++|+||.+.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 81 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGYL 81 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhhH
Confidence 5999998 79999999999999999999999988764333334432 122 14567899999998752
Q ss_pred h-cccHHHHccC-CCCeEEEEecC
Q 037949 131 D-IIMVRHMKQM-KNAAIVCNIGH 152 (243)
Q Consensus 131 ~-~i~~~~l~~l-~~g~~vvnvg~ 152 (243)
. ......++.+ +.+..+++++.
T Consensus 82 n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 82 HLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp HHHHHHHHHHTCTTCCCEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCcEEEEec
Confidence 0 1112235555 33478888753
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.71 E-value=6.6e-05 Score=62.11 Aligned_cols=66 Identities=14% Similarity=0.022 Sum_probs=51.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCccc-----C---HHhh-hcCCcEEEEccCChh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIPVL-----T---REDV-VSEAGLFVTTTENAD 131 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~~~-----~---~~~~-~~~aDvvi~a~G~~~ 131 (243)
+++|+|+|.+|..+++.|...|.+|+++|.++.+..... ..|..++ + +.++ +.++|+++.+++...
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH
Confidence 589999999999999999999999999999998875533 3454321 2 2222 568999999998754
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.71 E-value=3.9e-05 Score=64.87 Aligned_cols=40 Identities=18% Similarity=0.057 Sum_probs=34.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCC---CEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVG---ARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~G---a~V~v~d~~~~r~ 100 (243)
.+++++++|+|++ .||+.+++.|...| ++|+++++++.+.
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~ 61 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA 61 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhh
Confidence 4789999999976 99999999999999 9999999987653
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=97.69 E-value=3e-05 Score=64.58 Aligned_cols=37 Identities=22% Similarity=0.116 Sum_probs=32.6
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-eCCchhH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGT-EIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d~~~~r~ 100 (243)
+|+++|+|++ .||+.+++.|...|++|+++ ++++.+.
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~ 39 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKA 39 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence 5789999976 99999999999999999997 7887654
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.68 E-value=3.6e-05 Score=64.21 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=33.4
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCC-------EEEEEeCCchhH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGA-------RVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga-------~V~v~d~~~~r~ 100 (243)
+|+++|+|++ .||+.+++.|...|+ +|+++++++.+.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~ 46 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADL 46 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHH
Confidence 6899999976 999999999999999 999999987654
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=97.67 E-value=3.3e-05 Score=71.55 Aligned_cols=37 Identities=30% Similarity=0.458 Sum_probs=33.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
++|++++|+|++ .||+.+|+.|...|++|+++++++.
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~ 248 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA 248 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 579999999976 9999999999999999999988754
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=2.1e-05 Score=65.95 Aligned_cols=39 Identities=21% Similarity=0.190 Sum_probs=34.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC-chhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID-LICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~-~~r~ 100 (243)
+.|++++|+|++ .||+.+++.|...|++|++++++ +.++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 45 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANI 45 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhH
Confidence 578999999975 99999999999999999999998 6554
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.65 E-value=2.4e-05 Score=66.86 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-eCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGT-EIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d~~~~r~ 100 (243)
..+++++|+|++ .||+.+|+.|...|++|++. ++++.+.
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~ 64 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAA 64 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHH
Confidence 468999999986 99999999999999999886 5665543
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00011 Score=68.37 Aligned_cols=88 Identities=14% Similarity=0.089 Sum_probs=63.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhC--CCEEEEEeCCchhHHHHhhcC-------------------Cc-ccCHHhhhcCCcE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAV--GARVMGTEIDLICALQALTEG-------------------IP-VLTREDVVSEAGL 122 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~--Ga~V~v~d~~~~r~~~a~~~G-------------------~~-~~~~~~~~~~aDv 122 (243)
.++.|+|+|.+|..+|..|... |.+|+++|+++.+.+.....+ .. +.++.+.+.++|+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 4899999999999999999987 689999999998865443211 11 1234456778999
Q ss_pred EEEccCChhc--------------cc---HHHHccCCCCeEEEEecC
Q 037949 123 FVTTTENADI--------------IM---VRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 123 vi~a~G~~~~--------------i~---~~~l~~l~~g~~vvnvg~ 152 (243)
||.|++++.- +. ....+.++++.+|++.+.
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~ST 136 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKST 136 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred EEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 9999876431 11 122456788999998654
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=97.65 E-value=1.6e-05 Score=70.28 Aligned_cols=36 Identities=17% Similarity=0.140 Sum_probs=30.8
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+||+|+|+|++ .||+.+|+.|...|++|++++++..
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~ 37 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLR 37 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecC
Confidence 37899999986 9999999999999999887766543
|
| >3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00019 Score=63.06 Aligned_cols=91 Identities=16% Similarity=0.197 Sum_probs=60.6
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc--------------cCHHhhhcCCcEEE
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV--------------LTREDVVSEAGLFV 124 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~--------------~~~~~~~~~aDvvi 124 (243)
+......+++|+|+|.+|..+|..|...|.+|+++ +++++.+...+.|... .+. +.+.++|+|+
T Consensus 14 ~~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vi 91 (318)
T 3hwr_A 14 NLYFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLVL 91 (318)
T ss_dssp ------CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEEE
T ss_pred hhhccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEEE
Confidence 44456789999999999999999999999999999 8887765554444321 122 2356899999
Q ss_pred EccCChhc---ccHHHHccCCCCeEEEEecC
Q 037949 125 TTTENADI---IMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 125 ~a~G~~~~---i~~~~l~~l~~g~~vvnvg~ 152 (243)
.|+....+ +. +.-..++++..++++.-
T Consensus 92 lavk~~~~~~~l~-~l~~~l~~~~~iv~~~n 121 (318)
T 3hwr_A 92 FCVKSTDTQSAAL-AMKPALAKSALVLSLQN 121 (318)
T ss_dssp ECCCGGGHHHHHH-HHTTTSCTTCEEEEECS
T ss_pred EEcccccHHHHHH-HHHHhcCCCCEEEEeCC
Confidence 99866532 21 22234567878877543
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=3.4e-05 Score=68.93 Aligned_cols=85 Identities=15% Similarity=0.041 Sum_probs=60.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC--------------Ccc-cCHHhhhcCCcEEEEccCCh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG--------------IPV-LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G--------------~~~-~~~~~~~~~aDvvi~a~G~~ 130 (243)
+|+|+|+|.+|..+|..|...|.+|+++|+++.+.+.....+ +.+ .++.+++.++|+||.|+...
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~~ 96 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQ 96 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCChH
Confidence 799999999999999999999999999999987765444332 111 24566778899999998653
Q ss_pred hc---ccHH----HHccCCC-CeEEEEec
Q 037949 131 DI---IMVR----HMKQMKN-AAIVCNIG 151 (243)
Q Consensus 131 ~~---i~~~----~l~~l~~-g~~vvnvg 151 (243)
.. +. + ....+++ +.+++++.
T Consensus 97 ~~~~v~~-~~~~gl~~~l~~~~~ivv~~~ 124 (366)
T 1evy_A 97 FLRGFFE-KSGGNLIAYAKEKQVPVLVCT 124 (366)
T ss_dssp HHHHHHH-HHCHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHH-HhHHHHHHhcCccCCEEEEEC
Confidence 21 21 1 1223456 77777664
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.64 E-value=7.3e-05 Score=62.47 Aligned_cols=85 Identities=13% Similarity=0.177 Sum_probs=58.7
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-----CH---Hhh-hcCCcEEEEccCChhc-
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-----TR---EDV-VSEAGLFVTTTENADI- 132 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-----~~---~~~-~~~aDvvi~a~G~~~~- 132 (243)
..++++|+|+|.+|..+++.|...|. |+++|.++.+...+. .|+.++ +. .++ +.++|.++.+++....
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 85 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET 85 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHH
Confidence 35789999999999999999999999 999999998765555 565432 22 222 5689999999887532
Q ss_pred -ccHHHHccCCCCeEEEE
Q 037949 133 -IMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 133 -i~~~~l~~l~~g~~vvn 149 (243)
........+.+...++.
T Consensus 86 ~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 86 IHCILGIRKIDESVRIIA 103 (234)
T ss_dssp HHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHHCCCCeEEE
Confidence 11223444556644443
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00015 Score=63.69 Aligned_cols=89 Identities=16% Similarity=0.086 Sum_probs=64.0
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc----CCc---cc--CHHhh-hcCCcEEEEccCCh-
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE----GIP---VL--TREDV-VSEAGLFVTTTENA- 130 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~----G~~---~~--~~~~~-~~~aDvvi~a~G~~- 130 (243)
.+|++|+.+|+|+.|......++..|++|+.+|+++..++.|++. |.+ +. +..+. -..+|+|+.+...+
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~~~d 200 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAALAEP 200 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTTCSC
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCCccC
Confidence 579999999999988776666777899999999999987776642 432 11 12221 24689998765432
Q ss_pred --hcccHHHHccCCCCeEEEEec
Q 037949 131 --DIIMVRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 131 --~~i~~~~l~~l~~g~~vvnvg 151 (243)
.++ .+..+.+||||+++...
T Consensus 201 ~~~~l-~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 201 KRRVF-RNIHRYVDTETRIIYRT 222 (298)
T ss_dssp HHHHH-HHHHHHCCTTCEEEEEE
T ss_pred HHHHH-HHHHHHcCCCcEEEEEc
Confidence 344 35788899999998654
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=8e-05 Score=62.69 Aligned_cols=37 Identities=8% Similarity=-0.039 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCE-EEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGAR-VMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~-V~v~d~~~~ 98 (243)
+.||+++|+|++ .||+.+++.|...|++ |+++++++.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~ 41 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN 41 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCch
Confidence 578999999976 8999999999999996 999998863
|
| >1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=8.9e-05 Score=68.72 Aligned_cols=71 Identities=18% Similarity=0.275 Sum_probs=51.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-h-cCCccc--C-HHhhhcCCcEEEEccCChh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-T-EGIPVL--T-REDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~-~G~~~~--~-~~~~~~~aDvvi~a~G~~~ 131 (243)
.+.|++|+|+|+|.+|...++.|...|++|+++|.+........ . .++... . ..+.+.++|+||.++|.+.
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~~~ 84 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDT 84 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHH
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCCHH
Confidence 36899999999999999999999999999999987643321222 1 233321 1 1234568999999998764
|
| >1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=9.4e-05 Score=72.27 Aligned_cols=85 Identities=20% Similarity=0.214 Sum_probs=60.9
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-----------hcCC-------------c-ccCHHhhhc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-----------TEGI-------------P-VLTREDVVS 118 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-----------~~G~-------------~-~~~~~~~~~ 118 (243)
=++|.|||+|.+|..+|..+...|.+|+++|+++++++.+. ..|. . ..+. +.+.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 46799999999999999999999999999999998765431 2231 1 1123 4567
Q ss_pred CCcEEEEccCChhccc----HHHHccCCCCeEEEE
Q 037949 119 EAGLFVTTTENADIIM----VRHMKQMKNAAIVCN 149 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~----~~~l~~l~~g~~vvn 149 (243)
++|+||+|+.....+. .+.-..++++.+++.
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~Ilas 427 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILAS 427 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 8999999986432221 223355688888874
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.62 E-value=5.9e-05 Score=64.33 Aligned_cols=70 Identities=19% Similarity=0.241 Sum_probs=52.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCc-------------------hhHHHHhh----c--CCcc-----
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDL-------------------ICALQALT----E--GIPV----- 110 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~-------------------~r~~~a~~----~--G~~~----- 110 (243)
+.+++|+|+|+|++|..+++.|...|. +++++|.+. .+.+.+.+ . ...+
T Consensus 29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 578999999999999999999999998 899999987 44433321 1 1221
Q ss_pred -cC---HHhhhcCCcEEEEccCChh
Q 037949 111 -LT---REDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 111 -~~---~~~~~~~aDvvi~a~G~~~ 131 (243)
.+ ..+.+.++|+|++|+.+..
T Consensus 109 ~~~~~~~~~~~~~~DvVi~~~d~~~ 133 (249)
T 1jw9_B 109 LLDDAELAALIAEHDLVLDCTDNVA 133 (249)
T ss_dssp CCCHHHHHHHHHTSSEEEECCSSHH
T ss_pred cCCHhHHHHHHhCCCEEEEeCCCHH
Confidence 11 2345678999999998765
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=2.5e-05 Score=66.51 Aligned_cols=39 Identities=23% Similarity=0.214 Sum_probs=32.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-eCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGT-EIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d~~~~r~ 100 (243)
+.+|+++|+|++ .||+.+|+.|...|++|++. .+++.+.
T Consensus 24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~ 64 (267)
T 4iiu_A 24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGA 64 (267)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHH
Confidence 578999999986 99999999999999999775 4555443
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=97.60 E-value=3.2e-05 Score=64.47 Aligned_cols=37 Identities=22% Similarity=0.312 Sum_probs=32.2
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEE-EeCCchhH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMG-TEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v-~d~~~~r~ 100 (243)
||+++|+|++ .||+.+++.|...|++|++ .++++.+.
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~ 39 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAA 39 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence 6899999976 9999999999999999998 47776654
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=7.1e-05 Score=63.97 Aligned_cols=85 Identities=15% Similarity=0.074 Sum_probs=59.2
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc---CC----c-ccCHHhhhcCCcEEEEccCChhc---cc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE---GI----P-VLTREDVVSEAGLFVTTTENADI---IM 134 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~---G~----~-~~~~~~~~~~aDvvi~a~G~~~~---i~ 134 (243)
+++|+|+|.+|..+|..|...|.+|+++|+++.+....... |. . ..+..+.+.++|+|+.|+..... +.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~~ 81 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVK 81 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHhHHHHHH
Confidence 68999999999999999999999999999988654221111 21 0 11223456789999999876542 21
Q ss_pred HHHHccCCCCeEEEEec
Q 037949 135 VRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg 151 (243)
+....++++.+++++.
T Consensus 82 -~l~~~l~~~~~vv~~~ 97 (291)
T 1ks9_A 82 -SLASTLPVTTPILLIH 97 (291)
T ss_dssp -HHHTTSCTTSCEEEEC
T ss_pred -HHHhhCCCCCEEEEec
Confidence 2334567788888764
|
| >2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00011 Score=62.27 Aligned_cols=59 Identities=10% Similarity=0.085 Sum_probs=49.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC----CEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG----ARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G----a~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~ 129 (243)
.++.|+|+|.||..++..+...| .+|+++|+++.+ .|+.+ .+..+.+.++|+|+.|+..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~ 68 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVKP 68 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSCT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeCH
Confidence 57999999999999999999989 689999998875 46554 3566777889999999864
|
| >3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00069 Score=62.50 Aligned_cols=122 Identities=15% Similarity=0.113 Sum_probs=86.8
Q ss_pred hhccccchhhhhhh---hccccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeCC----chhH------------
Q 037949 43 LYGFRHSLPDGLMR---ATDITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEID----LICA------------ 100 (243)
Q Consensus 43 ~~~~~~~~~~av~~---~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~----~~r~------------ 100 (243)
.+|++...+.++.. ..+..+.+.+++|.|+|.-|.++|..+...|+ +++++|.. ..|.
T Consensus 195 ~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~ 274 (487)
T 3nv9_A 195 QQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKW 274 (487)
T ss_dssp THHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCcchhhhhcccHHHH
Confidence 34555544444432 23446788999999999999999999999999 79999875 2221
Q ss_pred HHHhhcCC-cccCHHhhhcCCcEEEEccCC-hhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 101 LQALTEGI-PVLTREDVVSEAGLFVTTTEN-ADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 101 ~~a~~~G~-~~~~~~~~~~~aDvvi~a~G~-~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
..|....- ...++.++++++|+++-++.. +++++.+.++.|.+..+|.-.+-...|+..+....
T Consensus 275 ~~A~~~n~~~~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLSNPtpEi~pe~A~~ 340 (487)
T 3nv9_A 275 EICETTNPSKFGSIAEACVGADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANPVPEIYPYEAKE 340 (487)
T ss_dssp HHHHHSCTTCCCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHH
T ss_pred HHHHhcccccCCCHHHHHhcCCEEEEecccCCCCCCHHHHHhhcCCCEEEECCCCCccCCHHHHHH
Confidence 11222111 234688999999999998843 78999999999998888877666655777665543
|
| >1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00018 Score=63.68 Aligned_cols=87 Identities=15% Similarity=0.072 Sum_probs=61.1
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC-------CEEEEEeCCch-----hHHHHhhc--------C------Ccc-cCHHhhh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG-------ARVMGTEIDLI-----CALQALTE--------G------IPV-LTREDVV 117 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G-------a~V~v~d~~~~-----r~~~a~~~--------G------~~~-~~~~~~~ 117 (243)
.+|+|+|+|.+|..+|..+...| .+|+++|+++. +....... | +.. .+..+++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAA 88 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHHH
Confidence 58999999999999999999888 89999999887 54333221 1 111 2456667
Q ss_pred cCCcEEEEccCChh---cccHHHHccCCCCeEEEEecC
Q 037949 118 SEAGLFVTTTENAD---IIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 118 ~~aDvvi~a~G~~~---~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.++|+|+.|+.... ++. +....++++.+++++.-
T Consensus 89 ~~aD~Vilav~~~~~~~v~~-~i~~~l~~~~ivv~~~~ 125 (354)
T 1x0v_A 89 EDADILIFVVPHQFIGKICD-QLKGHLKANATGISLIK 125 (354)
T ss_dssp TTCSEEEECCCGGGHHHHHH-HHTTCSCTTCEEEECCC
T ss_pred cCCCEEEEeCCHHHHHHHHH-HHHhhCCCCCEEEEECC
Confidence 89999999986532 221 22244577888887643
|
| >1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00011 Score=65.87 Aligned_cols=85 Identities=12% Similarity=0.049 Sum_probs=60.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC-------CEEEEEeCCch-----hHHHHhhc--------C------Ccc-cCHHhhh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG-------ARVMGTEIDLI-----CALQALTE--------G------IPV-LTREDVV 117 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G-------a~V~v~d~~~~-----r~~~a~~~--------G------~~~-~~~~~~~ 117 (243)
.++.|+|+|.+|..+|..|...| .+|+++|+++. +.+..... | +.+ .++.+++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999999888 89999999887 54333221 1 111 2355667
Q ss_pred cCCcEEEEccCChhcccHHH---H-c----cCCCCeEEEEec
Q 037949 118 SEAGLFVTTTENADIIMVRH---M-K----QMKNAAIVCNIG 151 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~---l-~----~l~~g~~vvnvg 151 (243)
.++|+||.|+.... +. +. + . .++++.+++++.
T Consensus 102 ~~aDvVilav~~~~-~~-~vl~~i~~~~~~~l~~~~ivvs~~ 141 (375)
T 1yj8_A 102 NDADLLIFIVPCQY-LE-SVLASIKESESIKIASHAKAISLT 141 (375)
T ss_dssp TTCSEEEECCCHHH-HH-HHHHHHTC---CCCCTTCEEEECC
T ss_pred cCCCEEEEcCCHHH-HH-HHHHHHhhhhhccCCCCCEEEEeC
Confidence 89999999986532 21 22 3 3 466788888764
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00014 Score=62.83 Aligned_cols=88 Identities=14% Similarity=0.144 Sum_probs=60.2
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHH-hhcCCcccCHHhhhcCCcEEEEccCChhc--------
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQA-LTEGIPVLTREDVVSEAGLFVTTTENADI-------- 132 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a-~~~G~~~~~~~~~~~~aDvvi~a~G~~~~-------- 132 (243)
.+++++|+|+|+.|++++..|...|+ +|+++++++++.... ...+.+..+..+ ..++|+||+||+..-.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~-~~~~DivInaTp~gm~~~~~~~~~ 196 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE-NQQADILVNVTSIGMKGGKEEMDL 196 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT-TCCCSEEEECSSTTCTTSTTTTSC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh-cccCCEEEECCCCCccCccccCCC
Confidence 57899999999999999999999998 899999998775332 223433221111 4579999999854210
Q ss_pred -ccHHHHccCCCCeEEEEecCCC
Q 037949 133 -IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 133 -i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.. +.++++..++++-..+
T Consensus 197 ~~~~---~~l~~~~~v~DlvY~P 216 (271)
T 1npy_A 197 AFPK---AFIDNASVAFDVVAMP 216 (271)
T ss_dssp SSCH---HHHHHCSEEEECCCSS
T ss_pred CCCH---HHcCCCCEEEEeecCC
Confidence 221 2334577787776543
|
| >2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00017 Score=70.49 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=59.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-------------c-ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-------------P-VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-------------~-~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++++++.+.. .|. . ..+. +.+.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 57999999999999999999999999999999987654321 221 1 1123 45678
Q ss_pred CcEEEEccCChhccc----HHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTENADIIM----VRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~~~~i~----~~~l~~l~~g~~vvn 149 (243)
+|+||+|+.....+. .+....++++++++.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~Ilas 425 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILAS 425 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEe
Confidence 999999986542221 223356788888864
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00026 Score=62.76 Aligned_cols=87 Identities=15% Similarity=0.048 Sum_probs=60.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-h-------c--CCc--c-cCHHhhhcCCcEEEEccCCh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-T-------E--GIP--V-LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~-------~--G~~--~-~~~~~~~~~aDvvi~a~G~~ 130 (243)
.+|.|+|+|.+|..+|..+...|. +|+++|+++++++... . . ... . .+. +.++++|+|+++.|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p 93 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVP 93 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 689999999999999999999998 9999999987764311 1 0 111 1 234 5678999999998654
Q ss_pred h---------------ccc--HHHHccCCCCeEEEEecC
Q 037949 131 D---------------IIM--VRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 131 ~---------------~i~--~~~l~~l~~g~~vvnvg~ 152 (243)
. ++. .+.+....|++++++++-
T Consensus 94 ~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 94 RKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp CCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 2 111 012333458899888643
|
| >2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0001 Score=63.98 Aligned_cols=86 Identities=15% Similarity=0.053 Sum_probs=59.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhC-----C-CEEEEEeCCchhHHHHhh-cCCccc--------------CHHhhhcCCcEE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAV-----G-ARVMGTEIDLICALQALT-EGIPVL--------------TREDVVSEAGLF 123 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~-----G-a~V~v~d~~~~r~~~a~~-~G~~~~--------------~~~~~~~~aDvv 123 (243)
.+++|+|+|.+|..+|..|... | .+|+++++ +.+.+...+ .|..+. +..+.+..+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 3799999999999999999988 9 89999998 665555445 565322 223446789999
Q ss_pred EEccCChhccc--HHHHccCCCCeEEEEec
Q 037949 124 VTTTENADIIM--VRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 124 i~a~G~~~~i~--~~~l~~l~~g~~vvnvg 151 (243)
|.|+.....-. .+....++++..|+++.
T Consensus 88 il~vk~~~~~~v~~~i~~~l~~~~~iv~~~ 117 (317)
T 2qyt_A 88 LFCTKDYDMERGVAEIRPMIGQNTKILPLL 117 (317)
T ss_dssp EECCSSSCHHHHHHHHGGGEEEEEEEEECS
T ss_pred EEecCcccHHHHHHHHHhhcCCCCEEEEcc
Confidence 99987654311 11223345677777753
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00033 Score=62.15 Aligned_cols=67 Identities=13% Similarity=0.016 Sum_probs=51.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-h-------cCC--cc---cCHHhhhcCCcEEEEccCC
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-T-------EGI--PV---LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~-------~G~--~~---~~~~~~~~~aDvvi~a~G~ 129 (243)
..+|.|+|+|.+|..+|..+...|. +|+++|+++.+++... . .+. .+ .+.++.++++|+|+.+.|.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 3589999999999999999999997 9999999987654411 1 121 11 3566678999999999865
Q ss_pred h
Q 037949 130 A 130 (243)
Q Consensus 130 ~ 130 (243)
+
T Consensus 89 p 89 (331)
T 1pzg_A 89 T 89 (331)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00013 Score=58.54 Aligned_cols=66 Identities=17% Similarity=0.025 Sum_probs=48.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-----ccC---HHhhhcCCcEEEEccCC
Q 037949 64 GKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-----VLT---REDVVSEAGLFVTTTEN 129 (243)
Q Consensus 64 g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-----~~~---~~~~~~~aDvvi~a~G~ 129 (243)
+++++|+|+ |.||+.+++.|...|.+|+++++++.+.......++. ..+ +.+.++++|+||.++|.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 478999998 8999999999999999999999988754211112332 122 23456789999999774
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.53 E-value=5.5e-05 Score=63.08 Aligned_cols=91 Identities=11% Similarity=0.053 Sum_probs=60.1
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCc-----ccC---HHhhhcCCcEEEEccCChhc
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIP-----VLT---REDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~-----~~~---~~~~~~~aDvvi~a~G~~~~ 132 (243)
..++|+|+|+ |.||+.+++.|...| ++|+++++++.++......++. +.+ +.++++++|+||.+.|....
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDL 101 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence 4589999995 699999999999999 8999999998764221122222 222 23456789999988765332
Q ss_pred --ccHHHHccCC--CCeEEEEecCC
Q 037949 133 --IMVRHMKQMK--NAAIVCNIGHF 153 (243)
Q Consensus 133 --i~~~~l~~l~--~g~~vvnvg~~ 153 (243)
.....++.++ ..+++|+++..
T Consensus 102 ~~~~~~~~~~~~~~~~~~iV~iSS~ 126 (236)
T 3qvo_A 102 DIQANSVIAAMKACDVKRLIFVLSL 126 (236)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hHHHHHHHHHHHHcCCCEEEEEecc
Confidence 1112334332 23578888764
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.52 E-value=4.3e-05 Score=64.72 Aligned_cols=40 Identities=38% Similarity=0.494 Sum_probs=34.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC-CchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEI-DLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~-~~~r~ 100 (243)
.+++++++|+|++ .||+.+++.|...|++|+++++ ++.+.
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~ 59 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAA 59 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHH
Confidence 4679999999975 9999999999999999999988 65543
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0002 Score=62.73 Aligned_cols=86 Identities=17% Similarity=0.108 Sum_probs=56.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHH-Hhh--cCC------ccc-CHHhhhcCCcEEEEccCChhc-
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQ-ALT--EGI------PVL-TREDVVSEAGLFVTTTENADI- 132 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~-a~~--~G~------~~~-~~~~~~~~aDvvi~a~G~~~~- 132 (243)
+|.|+|+|.+|..+|..+...|. +|+++|+++.++.. +.. .+. .+. +..+.++++|+|+.++|.+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~~~~ 81 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGANQKP 81 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC------
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCCCCC
Confidence 79999999999999999999998 99999999876532 222 111 111 123457899999999865431
Q ss_pred --------------ccH--HHHccCCCCeEEEEec
Q 037949 133 --------------IMV--RHMKQMKNAAIVCNIG 151 (243)
Q Consensus 133 --------------i~~--~~l~~l~~g~~vvnvg 151 (243)
+.. +.+....+++++++++
T Consensus 82 g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t 116 (304)
T 2v6b_A 82 GESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS 116 (304)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred CCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 000 1233346888888853
|
| >3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00054 Score=63.13 Aligned_cols=91 Identities=22% Similarity=0.260 Sum_probs=61.2
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEE-EEeC----------CchhHHHHhh-cC-------CcccCHHhhh-c
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVM-GTEI----------DLICALQALT-EG-------IPVLTREDVV-S 118 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~-v~d~----------~~~r~~~a~~-~G-------~~~~~~~~~~-~ 118 (243)
+..++|++|+|.|+|++|..+|+.|...|++|+ ++|. |...+..... .| .+.++.++.+ .
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~ 309 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGL 309 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTC
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcC
Confidence 446889999999999999999999999999987 7787 3444333222 22 1223344443 3
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecC
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.+|+++.|+. ...++.+....+ ++.+|.-|-
T Consensus 310 ~~DIlvPcA~-~n~i~~~na~~l--~ak~VvEgA 340 (440)
T 3aog_A 310 PVEFLVPAAL-EKQITEQNAWRI--RARIVAEGA 340 (440)
T ss_dssp CCSEEEECSS-SSCBCTTTGGGC--CCSEEECCS
T ss_pred CCcEEEecCC-cCccchhhHHHc--CCcEEEecC
Confidence 7999999964 344555556655 555655443
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00035 Score=61.07 Aligned_cols=66 Identities=17% Similarity=0.107 Sum_probs=49.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC--CEEEEEeCCchhHHHHh-hcC---------Ccc--cCHHhhhcCCcEEEEccCCh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG--ARVMGTEIDLICALQAL-TEG---------IPV--LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G--a~V~v~d~~~~r~~~a~-~~G---------~~~--~~~~~~~~~aDvvi~a~G~~ 130 (243)
.+++|+|+|.+|..+|..+...| .+|+++|+++.++.... ..+ ..+ .+. +.++++|+|+.|++.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 47999999999999999999888 58999999987653322 111 122 234 5678999999998874
Q ss_pred h
Q 037949 131 D 131 (243)
Q Consensus 131 ~ 131 (243)
.
T Consensus 81 ~ 81 (309)
T 1hyh_A 81 K 81 (309)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00016 Score=67.24 Aligned_cols=69 Identities=19% Similarity=0.142 Sum_probs=50.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhC-CCEEEEEeCCchhHHHHhh-cCCc-----ccC---HHhhhcCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAV-GARVMGTEIDLICALQALT-EGIP-----VLT---REDVVSEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~-Ga~V~v~d~~~~r~~~a~~-~G~~-----~~~---~~~~~~~aDvvi~a~G~ 129 (243)
.+.+++|+|+|+|.+|+.++..|... |.+|+++++++.++..... .+.. +.+ +.+.+.++|+||.|++.
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~ 98 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY 98 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence 46789999999999999999999988 6799999999887543332 2332 122 23456789999999875
|
| >3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00045 Score=63.34 Aligned_cols=91 Identities=18% Similarity=0.262 Sum_probs=62.7
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEE-EEEeCC----------chhHHHHhh-cC------CcccCHHhhh-cC
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARV-MGTEID----------LICALQALT-EG------IPVLTREDVV-SE 119 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V-~v~d~~----------~~r~~~a~~-~G------~~~~~~~~~~-~~ 119 (243)
+..+.|++|+|.|+|.+|..+|+.|...|++| .++|.+ ...+...+. .| .+.++.++.+ ..
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~ 295 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKD 295 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSC
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceecc
Confidence 44689999999999999999999999999996 578877 333333222 22 2233444543 47
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEecC
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
+||++.|+.. ..|+.+....+ ++.+|.-|-
T Consensus 296 ~DIliPcA~~-n~I~~~~a~~l--~ak~V~EgA 325 (424)
T 3k92_A 296 CDILVPAAIS-NQITAKNAHNI--QASIVVERA 325 (424)
T ss_dssp CSEEEECSCS-SCBCTTTGGGC--CCSEEECCS
T ss_pred ccEEeecCcc-cccChhhHhhc--CceEEEcCC
Confidence 9999999754 55666666666 566665443
|
| >3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00025 Score=62.65 Aligned_cols=83 Identities=13% Similarity=0.090 Sum_probs=58.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc--------------cCHHhhhcCCcEEEEccCCh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV--------------LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~--------------~~~~~~~~~aDvvi~a~G~~ 130 (243)
.+++|+|+|.||..+|..|...|.+|++++++ .+.+...+.|... .+.++ +..+|+|+.|+...
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKAP 81 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCch
Confidence 57999999999999999999999999999986 4444444455421 13333 57899999998664
Q ss_pred hcccHHHHc----cCCCCeEEEEec
Q 037949 131 DIIMVRHMK----QMKNAAIVCNIG 151 (243)
Q Consensus 131 ~~i~~~~l~----~l~~g~~vvnvg 151 (243)
.+ . +.++ .++++..|+.+.
T Consensus 82 ~~-~-~~~~~l~~~l~~~~~iv~~~ 104 (335)
T 3ghy_A 82 AL-E-SVAAGIAPLIGPGTCVVVAM 104 (335)
T ss_dssp HH-H-HHHGGGSSSCCTTCEEEECC
T ss_pred hH-H-HHHHHHHhhCCCCCEEEEEC
Confidence 32 1 2333 346777887653
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0003 Score=64.98 Aligned_cols=67 Identities=21% Similarity=0.120 Sum_probs=50.6
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cC-C-----cccCH---HhhhcCCcEEEEccCC
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EG-I-----PVLTR---EDVVSEAGLFVTTTEN 129 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G-~-----~~~~~---~~~~~~aDvvi~a~G~ 129 (243)
.+++|+|+|+|.||+.++..|...|++|+++|+++.++..... .+ . ++.+. .+.+.++|+|+.|++.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~ 78 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY 78 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcc
Confidence 4689999999999999999999999999999999877543322 12 2 22222 3456789999999875
|
| >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00034 Score=62.43 Aligned_cols=84 Identities=17% Similarity=0.093 Sum_probs=60.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhC-CCEEE-EEeCCchhHHHHhhcCCcc-cCHHhhhc--CCcEEEEccCChhcccHHHHc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAV-GARVM-GTEIDLICALQALTEGIPV-LTREDVVS--EAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~-Ga~V~-v~d~~~~r~~~a~~~G~~~-~~~~~~~~--~aDvvi~a~G~~~~i~~~~l~ 139 (243)
-+++|+|+|.||...+..++.. +++|+ ++|+++.++..+...|+.+ .+.++++. +.|+|+.|+.+..-.. ....
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~-~~~~ 84 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKE-LAIS 84 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHH-HHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHH-HHHH
Confidence 5799999999999999998877 67765 6799998876665667653 46777775 7899999987643322 2344
Q ss_pred cCCCCeEEEE
Q 037949 140 QMKNAAIVCN 149 (243)
Q Consensus 140 ~l~~g~~vvn 149 (243)
.++.|..|+.
T Consensus 85 al~aGkhVl~ 94 (359)
T 3e18_A 85 ALEAGKHVVC 94 (359)
T ss_dssp HHHTTCEEEE
T ss_pred HHHCCCCEEe
Confidence 4555655553
|
| >3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00092 Score=61.23 Aligned_cols=91 Identities=25% Similarity=0.305 Sum_probs=61.9
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEE-EEeC----------CchhHHHHhh-cC-Cc--ccCHHhhh-cCCcE
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVM-GTEI----------DLICALQALT-EG-IP--VLTREDVV-SEAGL 122 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~-v~d~----------~~~r~~~a~~-~G-~~--~~~~~~~~-~~aDv 122 (243)
+..++|++|+|.|+|++|..+|+.|...|++|+ ++|. |...+.+... .| .. ..+.++.+ ..+|+
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DV 292 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEV 292 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSE
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceE
Confidence 446889999999999999999999999999988 8888 5554433332 22 11 12223333 37999
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecC
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
++.|+ ....++.+.-..+ ++.+|.-|.
T Consensus 293 liP~A-~~n~i~~~~A~~l--~ak~V~EgA 319 (419)
T 3aoe_E 293 LVLAA-REGALDGDRARQV--QAQAVVEVA 319 (419)
T ss_dssp EEECS-CTTCBCHHHHTTC--CCSEEEECS
T ss_pred EEecc-cccccccchHhhC--CceEEEECC
Confidence 99995 4456776666666 455554343
|
| >2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0013 Score=60.22 Aligned_cols=91 Identities=19% Similarity=0.253 Sum_probs=62.0
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHh-CCCEEE-EEeC----------CchhHHHHhhc-C-------CcccCHHhhh-
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKA-VGARVM-GTEI----------DLICALQALTE-G-------IPVLTREDVV- 117 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~-~Ga~V~-v~d~----------~~~r~~~a~~~-G-------~~~~~~~~~~- 117 (243)
+..++|++|+|.|+|.+|..+++.|.. .|++|+ ++|. |+..+...... | .+.++.++.+
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~ 283 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE 283 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTT
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhc
Confidence 446889999999999999999999999 999987 6776 44443332221 2 1223344544
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
..+|+++.|+. ...++.+....+ ++.+|.-|-
T Consensus 284 ~~~DIliP~A~-~n~i~~~~a~~l--~ak~V~EgA 315 (415)
T 2tmg_A 284 LDVDILVPAAL-EGAIHAGNAERI--KAKAVVEGA 315 (415)
T ss_dssp CSCSEEEECSS-TTSBCHHHHTTC--CCSEEECCS
T ss_pred CCCcEEEecCC-cCccCcccHHHc--CCeEEEeCC
Confidence 37999999953 345666666656 566665443
|
| >1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1 | Back alignment and structure |
|---|
Probab=97.41 E-value=6.2e-05 Score=65.33 Aligned_cols=37 Identities=24% Similarity=0.274 Sum_probs=34.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.|++|+|+|+|.+|...+..|...|++|+|++.+.
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4689999999999999999999999999999997754
|
| >2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00023 Score=59.76 Aligned_cols=79 Identities=14% Similarity=0.075 Sum_probs=57.9
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEE-EEEeCCchhHHHHhhcCCcccCHHhhh-cCCcEEEEccCChhcccHHHHccCCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARV-MGTEIDLICALQALTEGIPVLTREDVV-SEAGLFVTTTENADIIMVRHMKQMKN 143 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V-~v~d~~~~r~~~a~~~G~~~~~~~~~~-~~aDvvi~a~G~~~~i~~~~l~~l~~ 143 (243)
+++|+|+|.||..+++.+...|.+| .++|+++. ... ...++++++ .++|+|+.|+++..... .....++.
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~~------~~~~~~~l~~~~~DvVv~~~~~~~~~~-~~~~~l~~ 73 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HEK------MVRGIDEFLQREMDVAVEAASQQAVKD-YAEKILKA 73 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CTT------EESSHHHHTTSCCSEEEECSCHHHHHH-HHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hhh------hcCCHHHHhcCCCCEEEECCCHHHHHH-HHHHHHHC
Confidence 6899999999999999998889987 68898852 211 234567777 68999999987654332 24555677
Q ss_pred CeEEEEecC
Q 037949 144 AAIVCNIGH 152 (243)
Q Consensus 144 g~~vvnvg~ 152 (243)
|..++....
T Consensus 74 G~~vv~~~~ 82 (236)
T 2dc1_A 74 GIDLIVLST 82 (236)
T ss_dssp TCEEEESCG
T ss_pred CCcEEEECc
Confidence 887777544
|
| >2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.40 E-value=9.1e-05 Score=63.74 Aligned_cols=84 Identities=14% Similarity=0.046 Sum_probs=54.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEE-EEEeCCchhHHHHh-hcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccC-C
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARV-MGTEIDLICALQAL-TEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQM-K 142 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V-~v~d~~~~r~~~a~-~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l-~ 142 (243)
++.|||+|.+|..+++.+... .+| .++|+++.++.... ..|....++++.+.++|+|+.|+.... + .+.+..+ +
T Consensus 4 ~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~-~-~~v~~~l~~ 80 (276)
T 2i76_A 4 VLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRY-I-KTVANHLNL 80 (276)
T ss_dssp CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTT-H-HHHHTTTCC
T ss_pred eEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHH-H-HHHHHHhcc
Confidence 589999999999999999877 888 48999988765544 335422234556678999999986643 2 2455555 5
Q ss_pred CCeEEEEecC
Q 037949 143 NAAIVCNIGH 152 (243)
Q Consensus 143 ~g~~vvnvg~ 152 (243)
++.+|++++.
T Consensus 81 ~~~ivi~~s~ 90 (276)
T 2i76_A 81 GDAVLVHCSG 90 (276)
T ss_dssp SSCCEEECCS
T ss_pred CCCEEEECCC
Confidence 7778888763
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00039 Score=59.07 Aligned_cols=63 Identities=19% Similarity=0.179 Sum_probs=49.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-----cCHHhhhcCCcEEEEccCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-----LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-----~~~~~~~~~aDvvi~a~G~ 129 (243)
++|+|+|+|.||..+++.|...|.+|+++++++.+.......+++. .+++ +.++|+||.+++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCc
Confidence 7899999999999999999999999999999987654444445432 2222 6789999998754
|
| >3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00044 Score=62.46 Aligned_cols=84 Identities=14% Similarity=0.118 Sum_probs=58.3
Q ss_pred EEEEEcCChHHHHHHHHHHh-CCCEEEEEe---CCchhHHHHhh-cC---------C---c-------c-cCHHhhhcCC
Q 037949 66 IAVDCGHGDVGRGCAAALKA-VGARVMGTE---IDLICALQALT-EG---------I---P-------V-LTREDVVSEA 120 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~-~Ga~V~v~d---~~~~r~~~a~~-~G---------~---~-------~-~~~~~~~~~a 120 (243)
+++|+|+|.+|..+|..|.. .|.+|+++| +++.+...+.. .| . . + .++++++.++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 83 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISGA 83 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTTC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCCC
Confidence 79999999999999999987 599999999 77666544322 22 1 0 1 2355667889
Q ss_pred cEEEEccCChhc---ccHHHHccCCCCeEEEEe
Q 037949 121 GLFVTTTENADI---IMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 121 Dvvi~a~G~~~~---i~~~~l~~l~~g~~vvnv 150 (243)
|+|+.|+..... +. +.-..++++.+|++.
T Consensus 84 D~Vilav~~~~~~~v~~-~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 84 DVVILTVPAFAHEGYFQ-AMAPYVQDSALIVGL 115 (404)
T ss_dssp SEEEECSCGGGHHHHHH-HHTTTCCTTCEEEET
T ss_pred CEEEEeCchHHHHHHHH-HHHhhCCCCcEEEEc
Confidence 999999866442 21 222345677877763
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00037 Score=61.38 Aligned_cols=63 Identities=17% Similarity=0.087 Sum_probs=47.9
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhh---cC------Cc--ccCHHhhhcCCcEEEEccCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQALT---EG------IP--VLTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~---~G------~~--~~~~~~~~~~aDvvi~a~G~ 129 (243)
++.|+|+|.+|..++..+...|. +|+++|+++.++..... .+ .. ..+ .+.++++|+|+.|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~ 77 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGV 77 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCC
Confidence 68999999999999999999998 99999999876543221 11 11 122 3457899999999875
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00034 Score=61.46 Aligned_cols=65 Identities=12% Similarity=-0.018 Sum_probs=49.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-h-------c--CCc--c-cCHHhhhcCCcEEEEccCC
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-T-------E--GIP--V-LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~-------~--G~~--~-~~~~~~~~~aDvvi~a~G~ 129 (243)
..+|.|+|+|.+|..+|..+...|. +|+++|+++.++.... . . ... . .+. +.++++|+|++|+|.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999999998 9999999987654311 1 0 111 1 234 567899999999864
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00045 Score=63.64 Aligned_cols=69 Identities=23% Similarity=0.243 Sum_probs=51.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch----hHHHHhhcCCccc---CHHhhhcC-CcEEEEccCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI----CALQALTEGIPVL---TREDVVSE-AGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~----r~~~a~~~G~~~~---~~~~~~~~-aDvvi~a~G~ 129 (243)
.+.|++|.|+|.|+.|+.+|+.|+..|++|.++|.++. ........|+++. ..++.+.+ +|+|+-.+|.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi 82 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGI 82 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcC
Confidence 35799999999999999999999999999999998642 1222334576542 12334455 8999888775
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00018 Score=59.64 Aligned_cols=68 Identities=10% Similarity=0.032 Sum_probs=49.2
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCCc-----ccC---HHhhhcCCcEEEEccCC
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGIP-----VLT---REDVVSEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~~-----~~~---~~~~~~~aDvvi~a~G~ 129 (243)
+.+++++|+|+ |.||+.+++.|...|+ +|+++++++.+.......++. +.+ ..+++++.|++|.+.|.
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~ 94 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT 94 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence 46899999995 6999999999999999 999999987643211111221 112 23445689999999875
|
| >3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00052 Score=67.26 Aligned_cols=85 Identities=22% Similarity=0.206 Sum_probs=58.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc---------------CCc-------ccCHHhhhcCCcE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE---------------GIP-------VLTREDVVSEAGL 122 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~---------------G~~-------~~~~~~~~~~aDv 122 (243)
++|.|+|+|.+|..+|..+...|.+|++.|++++.+..+... ... ..+..+.+.++|+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDl 396 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVDL 396 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCSE
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCCE
Confidence 799999999999999999999999999999999865443310 000 0111234678999
Q ss_pred EEEccCChhccc----HHHHccCCCCeEEEE
Q 037949 123 FVTTTENADIIM----VRHMKQMKNAAIVCN 149 (243)
Q Consensus 123 vi~a~G~~~~i~----~~~l~~l~~g~~vvn 149 (243)
||||+--.--+. .+.=..+++++++..
T Consensus 397 VIEAV~E~l~iK~~vf~~le~~~~~~aIlAS 427 (742)
T 3zwc_A 397 VVEAVFEDMNLKKKVFAELSALCKPGAFLCT 427 (742)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEeccccHHHHHHHHHHHhhcCCCCceEEe
Confidence 999964321122 222345688988884
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00068 Score=55.02 Aligned_cols=87 Identities=13% Similarity=0.034 Sum_probs=59.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc--cCH----HhhhcCCcEEEEccCChhc------
Q 037949 66 IAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV--LTR----EDVVSEAGLFVTTTENADI------ 132 (243)
Q Consensus 66 ~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~--~~~----~~~~~~aDvvi~a~G~~~~------ 132 (243)
+|+|+|+ |.||+.+++.|...|.+|+++++++.+..... .++++ .++ .+.+.++|+||.+.|....
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 80 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV 80 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHH
Confidence 6999996 79999999999999999999999987754322 34432 122 2456789999999875311
Q ss_pred -ccHHHHccCCC--CeEEEEecCC
Q 037949 133 -IMVRHMKQMKN--AAIVCNIGHF 153 (243)
Q Consensus 133 -i~~~~l~~l~~--g~~vvnvg~~ 153 (243)
.....++.++. ...+++++..
T Consensus 81 ~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 81 TSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp HHHHHHHHHHCSCCSSEEEEECCC
T ss_pred HHHHHHHHHHHhcCCceEEEEecc
Confidence 11123444433 4677777653
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00057 Score=60.18 Aligned_cols=84 Identities=15% Similarity=0.082 Sum_probs=59.1
Q ss_pred cEEEEEcCChHHHHHHHHHH-h-CCCEE-EEEeCCchhHHHHh-hcCC-c-ccCHHhhhc--CCcEEEEccCChhcccHH
Q 037949 65 KIAVDCGHGDVGRGCAAALK-A-VGARV-MGTEIDLICALQAL-TEGI-P-VLTREDVVS--EAGLFVTTTENADIIMVR 136 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~-~-~Ga~V-~v~d~~~~r~~~a~-~~G~-~-~~~~~~~~~--~aDvvi~a~G~~~~i~~~ 136 (243)
.+|+|+|+|.||...+..++ . .|+++ .++|+++.++.... ..|. . ..+.++++. ++|+|+.|+++..... .
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-~ 87 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPE-M 87 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHH-H
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHH-H
Confidence 48999999999999999987 4 47774 57899998764433 3466 3 345777765 6999999987654332 2
Q ss_pred HHccCCCCeEEEE
Q 037949 137 HMKQMKNAAIVCN 149 (243)
Q Consensus 137 ~l~~l~~g~~vvn 149 (243)
....++.|..|+.
T Consensus 88 ~~~al~~G~~v~~ 100 (346)
T 3cea_A 88 TIYAMNAGLNVFC 100 (346)
T ss_dssp HHHHHHTTCEEEE
T ss_pred HHHHHHCCCEEEE
Confidence 3455566765553
|
| >4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00064 Score=59.65 Aligned_cols=84 Identities=15% Similarity=0.054 Sum_probs=59.1
Q ss_pred cEEEEEcCChHHHHHHHHHHhC-CCEEE-EEeCCchhHHHHh-hcCCcccCHHhhhc--CCcEEEEccCChhcccHHHHc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAV-GARVM-GTEIDLICALQAL-TEGIPVLTREDVVS--EAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~-Ga~V~-v~d~~~~r~~~a~-~~G~~~~~~~~~~~--~aDvvi~a~G~~~~i~~~~l~ 139 (243)
.+++|+|+|.||...+..++.. +++++ ++|+++.++.... ..|....+.++++. ++|+|+.|+.+..-.. ....
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-~~~~ 82 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPTDTHAD-LIER 82 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCGGGHHH-HHHH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCchhHHH-HHHH
Confidence 4799999999999999999875 77765 6899998764433 45665456777775 7999999986643322 2334
Q ss_pred cCCCCeEEEE
Q 037949 140 QMKNAAIVCN 149 (243)
Q Consensus 140 ~l~~g~~vvn 149 (243)
.++.|..|+.
T Consensus 83 al~~gk~v~~ 92 (331)
T 4hkt_A 83 FARAGKAIFC 92 (331)
T ss_dssp HHHTTCEEEE
T ss_pred HHHcCCcEEE
Confidence 4455655543
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00059 Score=60.21 Aligned_cols=83 Identities=13% Similarity=0.099 Sum_probs=57.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhC-CCEEE-EEeCCchhHHHHh-hcCCc-ccCHHhhhc--CCcEEEEccCChhcccHHHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAV-GARVM-GTEIDLICALQAL-TEGIP-VLTREDVVS--EAGLFVTTTENADIIMVRHM 138 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~-Ga~V~-v~d~~~~r~~~a~-~~G~~-~~~~~~~~~--~aDvvi~a~G~~~~i~~~~l 138 (243)
.+++|+|+|.||...+..++.. +++|+ ++|+++.++.... ..|.. ..+.++++. ++|+|+.|+.+..-.. ...
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-~~~ 83 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVD-LIT 83 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHH-HHH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHH-HHH
Confidence 4799999999999999998876 67765 7899998764433 34654 346778776 7999999986643322 233
Q ss_pred ccCCCCeEEE
Q 037949 139 KQMKNAAIVC 148 (243)
Q Consensus 139 ~~l~~g~~vv 148 (243)
..++.|..|+
T Consensus 84 ~al~~gk~v~ 93 (344)
T 3euw_A 84 RAVERGIPAL 93 (344)
T ss_dssp HHHHTTCCEE
T ss_pred HHHHcCCcEE
Confidence 3444454444
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00056 Score=60.46 Aligned_cols=66 Identities=17% Similarity=0.006 Sum_probs=49.9
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh---c-----C--Cc--c-cCHHhhhcCCcEEEEccCC
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT---E-----G--IP--V-LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~---~-----G--~~--~-~~~~~~~~~aDvvi~a~G~ 129 (243)
..+|.|+|+|.+|..++..+...|. +|+++|+++.++..... . + .. . .+. +++++||+||.+.|.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~ 82 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGF 82 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 3589999999999999999999998 99999999886532111 1 1 11 1 234 668899999999865
Q ss_pred h
Q 037949 130 A 130 (243)
Q Consensus 130 ~ 130 (243)
+
T Consensus 83 p 83 (322)
T 1t2d_A 83 T 83 (322)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00092 Score=58.58 Aligned_cols=85 Identities=13% Similarity=0.021 Sum_probs=57.6
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc---------------c-cCHHhhhcCCcEEEEccC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP---------------V-LTREDVVSEAGLFVTTTE 128 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~---------------~-~~~~~~~~~aDvvi~a~G 128 (243)
.+++|+|+|.||..+|..|...|.+|+++++++. +...+.|.. + .+.+++...+|+|+.|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK 80 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIK 80 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecC
Confidence 4799999999999999999999999999999873 233333321 1 123344448999999976
Q ss_pred Chhccc--HHHHccCCCCeEEEEec
Q 037949 129 NADIIM--VRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 129 ~~~~i~--~~~l~~l~~g~~vvnvg 151 (243)
....-. .+.-..++++..|+.+-
T Consensus 81 ~~~~~~~l~~l~~~l~~~t~Iv~~~ 105 (320)
T 3i83_A 81 VVEGADRVGLLRDAVAPDTGIVLIS 105 (320)
T ss_dssp CCTTCCHHHHHTTSCCTTCEEEEEC
T ss_pred CCChHHHHHHHHhhcCCCCEEEEeC
Confidence 544321 12234456777777653
|
| >3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00061 Score=59.55 Aligned_cols=65 Identities=25% Similarity=0.179 Sum_probs=49.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC----------H-HhhhcCCcEEEEccCCh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT----------R-EDVVSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~----------~-~~~~~~aDvvi~a~G~~ 130 (243)
.+++|+|+|.||..++..|. .|.+|+++++++.+.+...+.|..... . .+....+|+|+.|+...
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~ 78 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH 78 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH
Confidence 47999999999999999999 999999999998766555555643211 0 22346799999997553
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00068 Score=62.58 Aligned_cols=66 Identities=20% Similarity=0.211 Sum_probs=51.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC---------------------c-ccCHHhhhcCCc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI---------------------P-VLTREDVVSEAG 121 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~---------------------~-~~~~~~~~~~aD 121 (243)
-.++.|+|.|-+|+.+|..+...|.+|+.+|+|+.+.+. ...|. . ..+..+++..+|
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~-ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVER-LRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHH-HHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHH-HHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 368999999999999999999999999999999987533 33331 1 123445667899
Q ss_pred EEEEccCCh
Q 037949 122 LFVTTTENA 130 (243)
Q Consensus 122 vvi~a~G~~ 130 (243)
++|.|+++|
T Consensus 100 ~~~I~VpTP 108 (444)
T 3vtf_A 100 ATFIAVGTP 108 (444)
T ss_dssp EEEECCCCC
T ss_pred ceEEEecCC
Confidence 999998764
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00088 Score=58.42 Aligned_cols=67 Identities=19% Similarity=0.198 Sum_probs=49.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHH-Hh--hcCC------cc--cCHHhhhcCCcEEEEccCCh
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQ-AL--TEGI------PV--LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~-a~--~~G~------~~--~~~~~~~~~aDvvi~a~G~~ 130 (243)
..+|+|+|+|.+|..++..+...|. +|+++|+++.++.. +. ..+. .+ .+..+.+.++|+|+.|++.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~~ 86 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR 86 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCCC
Confidence 3589999999999999999999998 99999999866531 22 2222 11 11124567899999998754
|
| >2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00059 Score=62.59 Aligned_cols=91 Identities=19% Similarity=0.169 Sum_probs=55.3
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEE-EEeCCc---------------hhHHHHhh-cC-------CcccCHH
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVM-GTEIDL---------------ICALQALT-EG-------IPVLTRE 114 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~-v~d~~~---------------~r~~~a~~-~G-------~~~~~~~ 114 (243)
+..++|++|+|.|+|++|..+|+.|...|++|+ ++|.++ ..+..... .| .+.++.+
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~ 286 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDE 286 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCcc
Confidence 346789999999999999999999999999987 788883 22222221 12 1222223
Q ss_pred hhh-cCCcEEEEccCChhcccHHHHccCCCCeEEEEecC
Q 037949 115 DVV-SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 115 ~~~-~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
+.+ ..+||++.|+ ....++.+....+ ++.+|.-|-
T Consensus 287 ~~~~~~~DIliP~A-~~n~i~~~~A~~l--~ak~VvEgA 322 (421)
T 2yfq_A 287 EFWTKEYDIIVPAA-LENVITGERAKTI--NAKLVCEAA 322 (421)
T ss_dssp --------CEEECS-CSSCSCHHHHTTC--CCSEEECCS
T ss_pred chhcCCccEEEEcC-CcCcCCcccHHHc--CCeEEEeCC
Confidence 332 3799999996 3455776666666 555555443
|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00072 Score=59.94 Aligned_cols=84 Identities=10% Similarity=-0.071 Sum_probs=59.2
Q ss_pred cEEEEEcCChHHHHHHHHHHhC-CCEEE-EEeCCchhHHHHh-hcCCc-ccCHHhhh--cCCcEEEEccCChhcccHHHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAV-GARVM-GTEIDLICALQAL-TEGIP-VLTREDVV--SEAGLFVTTTENADIIMVRHM 138 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~-Ga~V~-v~d~~~~r~~~a~-~~G~~-~~~~~~~~--~~aDvvi~a~G~~~~i~~~~l 138 (243)
-+++|+|+|.||...+..++.. |++|+ ++|+++.++.... ..|+. ..+.++++ .+.|+|+.|+.+..-.. ...
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-~~~ 84 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAE-VIE 84 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHH-HHH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHH-HHH
Confidence 4799999999999999999887 77754 7899998765433 34665 34677777 56999999987643222 234
Q ss_pred ccCCCCeEEEE
Q 037949 139 KQMKNAAIVCN 149 (243)
Q Consensus 139 ~~l~~g~~vvn 149 (243)
..++.|..|+.
T Consensus 85 ~al~~gk~vl~ 95 (354)
T 3db2_A 85 QCARSGKHIYV 95 (354)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCEEEE
Confidence 44455654443
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00042 Score=64.25 Aligned_cols=67 Identities=16% Similarity=0.153 Sum_probs=52.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCccc-----C---HHhh-hcCCcEEEEccCChh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIPVL-----T---REDV-VSEAGLFVTTTENAD 131 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~~~-----~---~~~~-~~~aDvvi~a~G~~~ 131 (243)
-+++|+|+|.+|..+|+.|...|.+|+++|.|+.++.... ..++.++ + +.++ ++.||+++.+|+...
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De 80 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE 80 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence 4699999999999999999999999999999999876554 3454322 2 2232 578999999988753
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00091 Score=57.91 Aligned_cols=69 Identities=17% Similarity=0.147 Sum_probs=49.5
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-------cCCc------ccC---HHhhhcCCcEE
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALT-------EGIP------VLT---REDVVSEAGLF 123 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-------~G~~------~~~---~~~~~~~aDvv 123 (243)
..++++|+|+|+ |.||..+++.|...|.+|+++++++.+...... .++. +.+ +.++++++|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 357899999998 799999999999999999999998765322111 1221 111 23345689999
Q ss_pred EEccCC
Q 037949 124 VTTTEN 129 (243)
Q Consensus 124 i~a~G~ 129 (243)
|.+++.
T Consensus 88 ih~A~~ 93 (342)
T 1y1p_A 88 AHIASV 93 (342)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 998763
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 243 | ||||
| d1v8ba1 | 163 | c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolas | 2e-60 | |
| d1li4a1 | 163 | c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolas | 7e-48 | |
| d1li4a2 | 267 | c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystei | 5e-10 | |
| d1v8ba2 | 313 | c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystei | 1e-06 | |
| d1v8ba2 | 313 | c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystei | 0.001 |
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 163 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Score = 185 bits (471), Expect = 2e-60
Identities = 89/164 (54%), Positives = 118/164 (71%), Gaps = 1/164 (0%)
Query: 42 NLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICAL 101
N+YG RHSLPDGLMRATD I+GKI V CG+GDVG+GCA+++K +GARV TEID ICA+
Sbjct: 1 NVYGCRHSLPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAI 60
Query: 102 QALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLD 161
QA+ EG V+T +++V + F+T T N D+I + H+ +MKN A+V NIGHFD+EI + +
Sbjct: 61 QAVMEGFNVVTLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNE 120
Query: 162 LEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTG 205
L Y+GI +KPQ D P + II+LA L+NLGC TG
Sbjct: 121 LFNYKGIHIENVKPQVDRITLPNGNK-IIVLARGRLLNLGCATG 163
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 163 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (388), Expect = 7e-48
Identities = 94/165 (56%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Query: 41 DNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICA 100
DNLYG R SL DG+ RATD+ IAGK+AV G+GDVG+GCA AL+ GARV+ TEID I A
Sbjct: 1 DNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINA 60
Query: 101 LQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDML 160
LQA EG V T ++ E +FVTTT DII+ RH +QMK+ AIVCNIGHFD EID+
Sbjct: 61 LQAAMEGYEVTTMDEACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVK 120
Query: 161 DLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTG 205
L K IKPQ D + RR II+LAE L+NLGC G
Sbjct: 121 WLNENAVEKVN-IKPQVDRYRLKNGRR-IILLAEGRLVNLGCAMG 163
|
| >d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.0 bits (135), Expect = 5e-10
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 20/121 (16%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDNLYGFRHSLPDGLMR 56
+ + +SEETT GV LY+M ANG L ++ T F + +S + +M
Sbjct: 144 LLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFHPSFVMSNSFTNQVMA 203
Query: 57 ATDI-TIAGKIAVD----CGHGD--VGRGCAAALKAVGARVMGTEIDLICALQALTEGIP 109
++ T K V D V A L + ++ + QA G+
Sbjct: 204 QIELWTHPDKYPVGVHFLPKKLDEAVAE---AHLGKLNV-----KLTKLTEKQAQYLGMS 255
Query: 110 V 110
Sbjct: 256 C 256
|
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Score = 46.0 bits (109), Expect = 1e-06
Identities = 21/118 (17%), Positives = 34/118 (28%), Gaps = 38/118 (32%)
Query: 155 NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCS 214
+I + E G+ R+ + + +F + ++ HP+FVMS S
Sbjct: 189 KKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQK--------YDHPAFVMSFS 240
Query: 215 FTNQA------------------------------AALHLGKPGDKFRKLTPEQAACI 242
F NQ A HL K +L Q +
Sbjct: 241 FCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFL 298
|
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Score = 37.2 bits (86), Expect = 0.001
Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 18/104 (17%)
Query: 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLF-----SEETTTLLFDN------LYGFRHSL 50
+ + ++ VSEETT GV RL +M LLF ++ T +D+ +
Sbjct: 187 IAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDHPAFVMSFSFCNQTF 246
Query: 51 P--DGLMRATDITIAGKIAVDCGHGD--VGRGCAAALKAVGARV 90
D K+ + H D V LK + A +
Sbjct: 247 AQLDLWQNKDTNKYENKVYLLPKHLDEKVAL---YHLKKLNASL 287
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 243 | |||
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 100.0 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 100.0 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.73 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.7 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.64 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.61 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.61 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.61 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 99.59 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.58 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 99.57 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.57 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 99.56 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 99.56 | |
| d1v8ba2 | 313 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 99.55 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.55 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.54 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 99.54 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 99.52 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.52 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.51 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.51 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 99.49 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 99.48 | |
| d1li4a2 | 267 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 99.44 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.37 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.34 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.32 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.29 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.28 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.28 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.25 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 99.02 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 99.01 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 98.95 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.93 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 98.93 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 98.89 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.88 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.85 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.85 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 98.83 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.82 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.8 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.8 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.79 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 98.79 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.79 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.78 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 98.77 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 98.77 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.76 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 98.76 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.75 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.74 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.73 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.73 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.73 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.72 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.7 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.68 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.68 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.68 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.66 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.65 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.64 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.63 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.62 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 98.61 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 98.59 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.58 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 98.58 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 98.57 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.56 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.55 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 98.54 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.54 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 98.51 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 98.49 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.49 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.49 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 98.49 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.48 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.47 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.47 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.46 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.45 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.44 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.43 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 98.42 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 98.38 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.37 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.37 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.37 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.36 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.36 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 98.35 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 98.34 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.34 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.32 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.32 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 98.26 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 98.25 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 98.25 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.23 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.21 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 98.21 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.21 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.2 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.18 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.16 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.15 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 98.13 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 98.12 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 98.11 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 98.08 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.07 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 98.05 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 97.95 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 97.9 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 97.84 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 97.82 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 97.81 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 97.79 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.78 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 97.75 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 97.74 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.74 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.72 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 97.71 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 97.7 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.7 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.64 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 97.62 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 97.62 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 97.59 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.56 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 97.55 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 97.52 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 97.52 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.52 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 97.52 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.48 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 97.46 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.44 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.42 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 97.41 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 97.4 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.39 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 97.38 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 97.37 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.37 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 97.35 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.35 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.34 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.33 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 97.33 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 97.33 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 97.32 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 97.3 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.3 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 97.29 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 97.28 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.28 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 97.28 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.27 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 97.26 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.25 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 97.24 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.24 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 97.23 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.23 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.23 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.21 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.21 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 97.2 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 97.2 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.16 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 97.14 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 97.13 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 97.12 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 97.11 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 97.09 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.08 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 97.07 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.07 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.07 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 97.04 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 97.04 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.03 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 97.01 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 97.0 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.93 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 96.91 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 96.8 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.79 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 96.78 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 96.75 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.73 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 96.72 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 96.7 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 96.7 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 96.69 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 96.64 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 96.63 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 96.63 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 96.52 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 96.52 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 96.49 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.46 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 96.46 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 96.43 | |
| d1vl6a1 | 222 | Malate oxidoreductase (malic enzyme) {Thermotoga m | 96.43 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 96.42 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 96.4 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 96.39 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 96.38 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 96.36 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 96.35 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 96.35 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 96.33 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 96.33 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.33 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 96.31 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 96.27 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 96.2 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.17 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 96.15 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 96.14 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 96.14 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 96.13 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 96.08 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 96.06 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.05 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 96.02 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 96.0 | |
| d1h6va1 | 235 | Mammalian thioredoxin reductase {Rat (Rattus norve | 95.98 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 95.96 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 95.96 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 95.94 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 95.93 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 95.93 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 95.9 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 95.9 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 95.83 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 95.79 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 95.79 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 95.75 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 95.72 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 95.72 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.7 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 95.69 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 95.63 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 95.58 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 95.57 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 95.56 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 95.52 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 95.52 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 95.48 | |
| d1pvva2 | 163 | Ornithine transcarbamoylase {Archaeon Pyrococcus f | 95.46 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 95.44 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 95.42 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 95.41 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 95.41 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 95.41 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 95.38 | |
| d1onfa1 | 259 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.31 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 95.15 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 95.11 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 95.04 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.98 | |
| d1mo9a1 | 261 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.96 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 94.83 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 94.78 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 94.73 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 94.69 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 94.68 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.65 | |
| d1ps9a2 | 162 | 2,4-dienoyl-CoA reductase, C-terminal domain {Esch | 94.61 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 94.52 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 94.48 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 94.48 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 94.45 | |
| d2h1qa1 | 251 | Hypothetical protein Dhaf_3308 {Desulfitobacterium | 94.36 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 94.36 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 94.34 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 94.32 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 94.16 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 94.08 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 94.02 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 93.91 | |
| d2gjca1 | 311 | Thiazole biosynthetic enzyme Thi4 {Baker's yeast ( | 93.84 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.74 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 93.71 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 93.69 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 93.65 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 93.61 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.57 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 93.54 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 93.52 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.44 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 93.43 | |
| d1cjca1 | 225 | Adrenodoxin reductase of mitochondrial p450 system | 93.4 | |
| d1pj3a1 | 294 | Mitochondrial NAD(P)-dependent malic enzyme {Human | 93.39 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 93.28 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 93.24 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 93.14 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 93.12 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 93.09 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 93.06 | |
| d2cula1 | 230 | GidA-related protein TTHA1897 {Thermus thermophilu | 93.02 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 92.97 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 92.85 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 92.71 | |
| d1lqta1 | 216 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 92.69 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 92.68 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 92.68 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.59 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 92.13 | |
| d1aoga1 | 238 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 92.01 | |
| d1ml4a2 | 157 | Aspartate carbamoyltransferase catalytic subunit { | 91.92 | |
| d1xdia1 | 233 | Dihydrolipoamide dehydrogenase {Mycobacterium tube | 91.82 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 91.74 | |
| d1jnra2 | 356 | Adenylylsulfate reductase A subunit {Archaeon Arch | 91.71 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 91.68 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 91.6 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.56 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 91.29 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 91.29 | |
| d1pg5a2 | 153 | Aspartate carbamoyltransferase catalytic subunit { | 91.11 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 91.08 | |
| d1m6ia1 | 213 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 90.93 | |
| d1chua2 | 305 | L-aspartate oxidase {Escherichia coli [TaxId: 562] | 90.93 | |
| d1o0sa1 | 308 | Mitochondrial NAD(P)-dependent malic enzyme {Pig r | 90.91 | |
| d1neka2 | 330 | Succinate dehydogenase {Escherichia coli [TaxId: 5 | 90.88 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.87 | |
| d1ebfa1 | 168 | Homoserine dehydrogenase {Baker's yeast (Saccharom | 90.85 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.85 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.75 | |
| d1feca1 | 240 | Trypanothione reductase {Crithidia fasciculata [Ta | 90.53 | |
| d3cmco1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.14 | |
| d1mv8a3 | 136 | GDP-mannose 6-dehydrogenase, GDP-binding domain {P | 90.12 | |
| d1trba2 | 126 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 90.04 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 89.97 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 89.81 | |
| d2b0ja2 | 242 | 5,10-methenyltetrahydromethanopterin hydrogenase, | 89.63 | |
| d1gq2a1 | 298 | Mitochondrial NAD(P)-dependent malic enzyme {Domes | 89.56 | |
| d1vlva2 | 161 | Ornithine transcarbamoylase {Thermotoga maritima [ | 89.45 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 89.44 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 89.23 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 89.15 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 88.64 | |
| d1qp8a2 | 121 | Putative formate dehydrogenase {Archaeon Pyrobacul | 88.36 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 88.15 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 87.42 | |
| d1otha2 | 170 | Ornithine transcarbamoylase {Human (Homo sapiens) | 87.42 | |
| d1fl2a2 | 126 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 87.24 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 87.22 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 87.08 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 86.96 | |
| d1ekxa2 | 160 | Aspartate carbamoyltransferase catalytic subunit { | 86.78 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 86.64 | |
| d1kf6a2 | 311 | Fumarate reductase {Escherichia coli [TaxId: 562]} | 86.36 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 86.28 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 85.88 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 85.25 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 85.24 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 84.62 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 84.39 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 84.31 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 84.26 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 84.06 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 84.05 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 83.98 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 83.9 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 83.47 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 83.41 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 83.32 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 83.3 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 83.27 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 83.2 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 83.16 | |
| d2at2a2 | 151 | Aspartate carbamoyltransferase catalytic subunit { | 83.03 | |
| d1vdca2 | 130 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 82.55 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.41 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 82.23 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 81.88 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 81.68 | |
| d1dxha2 | 185 | Ornithine transcarbamoylase {Pseudomonas aeruginos | 81.61 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 80.78 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 80.74 | |
| d1tuga1 | 310 | Aspartate carbamoyltransferase catalytic subunit { | 80.65 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 80.06 |
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=100.00 E-value=3.2e-36 Score=240.59 Aligned_cols=163 Identities=55% Similarity=0.924 Sum_probs=153.0
Q ss_pred hhhccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCc
Q 037949 42 NLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAG 121 (243)
Q Consensus 42 ~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aD 121 (243)
|.|+|++|++++++|+++..++||+++|+|||++|+++|+.|+++|++|+|+|+||.++.+|..+|+++.+++++++.+|
T Consensus 1 N~yg~g~S~~d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~~~~a~~~aD 80 (163)
T d1v8ba1 1 NVYGCRHSLPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGD 80 (163)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCS
T ss_pred CccccchhHHHHHHHHhCceecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCchhHccccCc
Confidence 67999999999999999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeeccc
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLG 201 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~ 201 (243)
+++++||++++++.+.|+.||+++++.|+|+++.|||.+.+..++..+..++++++..|.+|+++ .+.+|++|++|||+
T Consensus 81 i~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd~EIdv~~L~~~~~~~~~~vrp~V~~y~lpdG~-~i~lLaeGrLVNL~ 159 (163)
T d1v8ba1 81 FFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVKPQVDRITLPNGN-KIIVLARGRLLNLG 159 (163)
T ss_dssp EEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHH
T ss_pred EEEEcCCCCccccHHHHHHhhCCeEEEeccccchhhhhHHHHhCcCcceeeecCCceEEEeCCCC-EEEEEECCcEEEec
Confidence 99999999999999999999999999999999999999998764344556788999999999988 69999999999999
Q ss_pred CCCC
Q 037949 202 CPTG 205 (243)
Q Consensus 202 s~~g 205 (243)
|+.|
T Consensus 160 ~a~G 163 (163)
T d1v8ba1 160 CATG 163 (163)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 9875
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-35 Score=233.42 Aligned_cols=163 Identities=56% Similarity=0.854 Sum_probs=153.2
Q ss_pred HhhhccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCC
Q 037949 41 DNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEA 120 (243)
Q Consensus 41 ~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~a 120 (243)
||.|+|++++|++++|+++..+.||+|+|+|||+||+.+|+.++++|++|+++|++|.+..+|..+|+++.++++++..+
T Consensus 1 dN~yg~g~S~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~~~~~a~~~a 80 (163)
T d1li4a1 1 DNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEG 80 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTC
T ss_pred CCcccchhhHHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEeeehhhhhhhc
Confidence 68999999999999999998899999999999999999999999999999999999999889999999999999999999
Q ss_pred cEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecc
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNL 200 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl 200 (243)
|+++.|||++++|+.+.|+.||+|+++.|+|+++.|||.+.|... ..++.++++++..|.+|+++ .+.+|++|++|||
T Consensus 81 divvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~EId~~~L~~~-~~~~~~v~~~v~~y~l~dG~-~i~lLaeGrlvNL 158 (163)
T d1li4a1 81 NIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNEN-AVEKVNIKPQVDRYRLKNGR-RIILLAEGRLVNL 158 (163)
T ss_dssp SEEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTTSBCHHHHHHH-CSEEEEEETTEEEEECTTSC-EEEEEGGGSCHHH
T ss_pred cEEEecCCCccchhHHHHHhccCCeEEEEeccccceecHHHHhhc-cceeeeecCCeeEEEeCCCC-EEEEEeCCCeEee
Confidence 999999999999999999999999999999999999999999762 34667888999999999988 7999999999999
Q ss_pred cCCCC
Q 037949 201 GCPTG 205 (243)
Q Consensus 201 ~s~~g 205 (243)
+++.|
T Consensus 159 ~~a~G 163 (163)
T d1li4a1 159 GCAMG 163 (163)
T ss_dssp HSSCC
T ss_pred cCCCC
Confidence 99765
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=2.7e-17 Score=131.51 Aligned_cols=144 Identities=18% Similarity=0.226 Sum_probs=110.5
Q ss_pred hhhccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcc-c-----CHH
Q 037949 42 NLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPV-L-----TRE 114 (243)
Q Consensus 42 ~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~-~-----~~~ 114 (243)
++++| .+|++++.. ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|+++.|++.+++.|++. . +..
T Consensus 10 epla~---a~~a~~~~~--~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~ 84 (171)
T d1pl8a2 10 EPLSV---GIHACRRGG--VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQ 84 (171)
T ss_dssp HHHHH---HHHHHHHHT--CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHH
T ss_pred HHHHH---HHHHHHHhC--CCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccc
Confidence 45555 468888764 4689999999999999999999999999 8999999999999999999852 2 122
Q ss_pred hh---h-----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccC
Q 037949 115 DV---V-----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQ 184 (243)
Q Consensus 115 ~~---~-----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~ 184 (243)
+. + .++|++++|+|++..++ ..++.++++|+++.+|... ..+|...+.. ++ +.+.+ +.+|. .+
T Consensus 85 ~~~~~~~~~~g~g~Dvvid~~G~~~~~~-~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~-k~---l~i~G-s~~~~-~~ 157 (171)
T d1pl8a2 85 EIARKVEGQLGCKPEVTIECTGAEASIQ-AGIYATRSGGTLVLVGLGSEMTTVPLLHAAI-RE---VDIKG-VFRYC-NT 157 (171)
T ss_dssp HHHHHHHHHHTSCCSEEEECSCCHHHHH-HHHHHSCTTCEEEECSCCCSCCCCCHHHHHH-TT---CEEEE-CCSCS-SC
T ss_pred cccccccccCCCCceEEEeccCCchhHH-HHHHHhcCCCEEEEEecCCCCCccCHHHHHH-CC---cEEEE-EeCCH-hH
Confidence 21 1 36899999999998886 5899999999999999875 3466666655 34 33432 22332 34
Q ss_pred chhhHHhhhcCCe
Q 037949 185 TRRGIIILAERLL 197 (243)
Q Consensus 185 ~~~ai~ll~~G~i 197 (243)
+++++++|++|+|
T Consensus 158 ~~~al~li~~gki 170 (171)
T d1pl8a2 158 WPVAISMLASKSV 170 (171)
T ss_dssp HHHHHHHHHTTSC
T ss_pred HHHHHHHHHcCCC
Confidence 4558999999987
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.70 E-value=8.1e-17 Score=128.30 Aligned_cols=143 Identities=18% Similarity=0.140 Sum_probs=107.9
Q ss_pred hhhccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-c--C-----H
Q 037949 42 NLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-L--T-----R 113 (243)
Q Consensus 42 ~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~--~-----~ 113 (243)
++++| .+|++++.. ..+|++|+|+|+|+||+.+++.++.+|++|+++|+++.|++.+++.|++. . + .
T Consensus 10 ePla~---a~~a~~~~~--~~~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~ 84 (170)
T d1e3ja2 10 EPLSV---GVHACRRAG--VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEE 84 (170)
T ss_dssp HHHHH---HHHHHHHHT--CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCH
T ss_pred HHHHH---HHHHHHHhC--CCCCCEEEEEcccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEecccccccc
Confidence 35554 468887764 46899999999999999999999999999999999999998899888742 1 1 1
Q ss_pred Hh---hh-----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEcc
Q 037949 114 ED---VV-----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFP 183 (243)
Q Consensus 114 ~~---~~-----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~ 183 (243)
.+ .+ .++|++++|+|++..++ ..++.++++|+++.+|.... .++...+.. ++ +.+.. +..|. .
T Consensus 85 ~~~~~~~~~~~g~g~D~vid~~g~~~~~~-~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~-k~---i~i~g-s~~~~-~ 157 (170)
T d1e3ja2 85 SSIIERIRSAIGDLPNVTIDCSGNEKCIT-IGINITRTGGTLMLVGMGSQMVTVPLVNACA-RE---IDIKS-VFRYC-N 157 (170)
T ss_dssp HHHHHHHHHHSSSCCSEEEECSCCHHHHH-HHHHHSCTTCEEEECSCCSSCCCCCHHHHHT-TT---CEEEE-CCSCS-S
T ss_pred chhhhhhhcccccCCceeeecCCChHHHH-HHHHHHhcCCceEEEecCCCCCCcCHHHHHH-CC---CEEEE-EECCH-H
Confidence 11 11 36899999999998886 57999999999999998753 466665554 23 44443 22332 2
Q ss_pred CchhhHHhhhcCC
Q 037949 184 QTRRGIIILAERL 196 (243)
Q Consensus 184 ~~~~ai~ll~~G~ 196 (243)
+++++++++++||
T Consensus 158 ~~~~ai~li~~Gk 170 (170)
T d1e3ja2 158 DYPIALEMVASGR 170 (170)
T ss_dssp CHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCC
Confidence 4444899999986
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.64 E-value=1.9e-16 Score=126.77 Aligned_cols=142 Identities=9% Similarity=0.053 Sum_probs=108.2
Q ss_pred chhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----Hhhh----
Q 037949 49 SLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----EDVV---- 117 (243)
Q Consensus 49 ~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~~~---- 117 (243)
..||++.+......+|++|+|+|+|++|..+++.++.+|+ +|+++|.++.|++.+++.|.+ +++. ++..
T Consensus 18 Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~ 97 (172)
T d1h2ba2 18 TAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTR 97 (172)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTT
T ss_pred HHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhC
Confidence 3578888765334689999999999999999999999998 778899999999888888875 3321 1111
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC-CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD-NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAER 195 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~-~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G 195 (243)
.++|++++|+|+...++ ..++.++++|+++.+|..+ .+++...+.. ++ +++.. +..+.+.+.+++++|+++|
T Consensus 98 ~~g~d~vid~~g~~~~~~-~a~~~l~~~G~iv~~G~~~~~~~~~~~l~~-k~---~~i~G-s~~~~~~d~~~~l~l~~~G 171 (172)
T d1h2ba2 98 GRGVNVAMDFVGSQATVD-YTPYLLGRMGRLIIVGYGGELRFPTIRVIS-SE---VSFEG-SLVGNYVELHELVTLALQG 171 (172)
T ss_dssp TCCEEEEEESSCCHHHHH-HGGGGEEEEEEEEECCCSSCCCCCHHHHHH-TT---CEEEE-CCSCCHHHHHHHHHHHHTT
T ss_pred CCCceEEEEecCcchHHH-HHHHHHhCCCEEEEEeCcccccCCHHHHHh-CC---cEEEE-EEecCHHHHHHHHHHHHcC
Confidence 36899999999988886 5799999999999999764 4567666655 23 44543 2334555655588999998
Q ss_pred C
Q 037949 196 L 196 (243)
Q Consensus 196 ~ 196 (243)
|
T Consensus 172 K 172 (172)
T d1h2ba2 172 K 172 (172)
T ss_dssp S
T ss_pred C
Confidence 6
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.61 E-value=4.6e-16 Score=123.99 Aligned_cols=147 Identities=15% Similarity=0.082 Sum_probs=106.9
Q ss_pred hhcccc-chhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH---H---
Q 037949 43 LYGFRH-SLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR---E--- 114 (243)
Q Consensus 43 ~~~~~~-~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~---~--- 114 (243)
++.|+. ..|++++++. ..+|++|+|+|+|+||+..++.++.+|++++++|.++++++.+++.|++ +++. .
T Consensus 11 pl~Cag~Tay~al~~~~--~~~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~ 88 (168)
T d1uufa2 11 PLLCAGITTYSPLRHWQ--AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMA 88 (168)
T ss_dssp GGGTHHHHHHHHHHHTT--CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHH
T ss_pred HHHhHHHHHHHHHHHhC--CCCCCEEEEeccchHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEECchhhHHH
Confidence 455542 3578887653 4689999999999999999999999999999999999998888888985 3321 1
Q ss_pred hhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHh
Q 037949 115 DVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIII 191 (243)
Q Consensus 115 ~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~l 191 (243)
...+++|++++|+|.+..++ ..++.++++|+++.+|... ..++...+.. ++ +.+.. +..+...+.++++++
T Consensus 89 ~~~~~~D~vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~-k~---~~i~G-s~~~~~~d~~e~l~l 162 (168)
T d1uufa2 89 AHLKSFDFILNTVAAPHNLD-DFTTLLKRDGTMTLVGAPATPHKSPEVFNLIM-KR---RAIAG-SMIGGIPETQEMLDF 162 (168)
T ss_dssp TTTTCEEEEEECCSSCCCHH-HHHTTEEEEEEEEECCCC-------CHHHHHT-TT---CEEEE-CCSCCHHHHHHHHHH
T ss_pred HhcCCCceeeeeeecchhHH-HHHHHHhcCCEEEEeccCCCCcccccHHHHHH-CC---cEEEE-EeecCHHHHHHHHHH
Confidence 12357999999999988886 5799999999999999764 2345555544 23 33432 223444555557888
Q ss_pred hhcCCe
Q 037949 192 LAERLL 197 (243)
Q Consensus 192 l~~G~i 197 (243)
+++++|
T Consensus 163 ~a~~~I 168 (168)
T d1uufa2 163 CAEHGI 168 (168)
T ss_dssp HHHHTC
T ss_pred HHHcCC
Confidence 887665
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.61 E-value=2.6e-16 Score=125.57 Aligned_cols=147 Identities=16% Similarity=0.098 Sum_probs=106.9
Q ss_pred hhcccc-chhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH-H-----
Q 037949 43 LYGFRH-SLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR-E----- 114 (243)
Q Consensus 43 ~~~~~~-~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~-~----- 114 (243)
++.|.. ..|+++++.. ..+|++|+|+|+|++|+.+++.++.+|++|+++|.++.|++.+++.|++ +++. +
T Consensus 8 pl~cag~Ta~~al~~~~--~~~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~ 85 (168)
T d1piwa2 8 PLLCGGLTVYSPLVRNG--CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWG 85 (168)
T ss_dssp GGGTHHHHHHHHHHHTT--CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHH
T ss_pred HHHHHHHHHHHHHHHhC--cCCCCEEEEECCCCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeeccchHHHH
Confidence 555543 3588887753 4689999999999999999999999999999999999999999999985 3321 1
Q ss_pred -hhhcCCcEEEEccCChh--cccHHHHccCCCCeEEEEecCCCCC--CChhHHHHhhcCeEEEeecCeeeeEccCchhhH
Q 037949 115 -DVVSEAGLFVTTTENAD--IIMVRHMKQMKNAAIVCNIGHFDNE--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGI 189 (243)
Q Consensus 115 -~~~~~aDvvi~a~G~~~--~i~~~~l~~l~~g~~vvnvg~~~~~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai 189 (243)
......|++++|+|+.. .++ ..++.++++|+++++|..+.. ++...+.. ++..+.. +..+..++.++++
T Consensus 86 ~~~~~~~d~vi~~~~~~~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----k~~~i~G-s~~g~~~~~~e~l 159 (168)
T d1piwa2 86 EKYFDTFDLIVVCASSLTDIDFN-IMPKAMKVGGRIVSISIPEQHEMLSLKPYGL----KAVSISY-SALGSIKELNQLL 159 (168)
T ss_dssp HHSCSCEEEEEECCSCSTTCCTT-TGGGGEEEEEEEEECCCCCSSCCEEECGGGC----BSCEEEE-CCCCCHHHHHHHH
T ss_pred HhhhcccceEEEEecCCccchHH-HHHHHhhccceEEEeccccccccccHHHHHh----CCcEEEE-EeeCCHHHHHHHH
Confidence 12346899999987644 344 478999999999999987533 44444332 3344432 2223444555588
Q ss_pred HhhhcCCe
Q 037949 190 IILAERLL 197 (243)
Q Consensus 190 ~ll~~G~i 197 (243)
+|+++|+|
T Consensus 160 ~li~~gkI 167 (168)
T d1piwa2 160 KLVSEKDI 167 (168)
T ss_dssp HHHHHTTC
T ss_pred HHHHhCCC
Confidence 99999986
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.61 E-value=7.8e-16 Score=122.10 Aligned_cols=138 Identities=14% Similarity=0.138 Sum_probs=104.9
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----hcC
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----VSE 119 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~~~ 119 (243)
.|++++++. ..+|++|+|+|+|+||+.+++.++.+|++|+++|+++.|++.+++.|++ +++ ..+. ..+
T Consensus 16 a~~al~~~~--~~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g 93 (166)
T d1llua2 16 VYKGLKQTN--ARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGG 93 (166)
T ss_dssp HHHHHHHHT--CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSS
T ss_pred HHHHHHHhC--CCCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccccchhHHHHHHHhhcC
Confidence 578887754 4689999999999999999999999999999999999999899999985 322 2121 246
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcC
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAER 195 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G 195 (243)
.|.++++++.++.++ ..++.++++|+++.+|... .+++...+.. +++++.. +..+.+++.+++++++++|
T Consensus 94 ~~~~i~~~~~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----k~~~i~G-s~~~~~~d~~e~l~l~~~G 165 (166)
T d1llua2 94 AHGVLVTAVSNSAFG-QAIGMARRGGTIALVGLPPGDFPTPIFDVVL----KGLHIAG-SIVGTRADLQEALDFAGEG 165 (166)
T ss_dssp EEEEEECCSCHHHHH-HHHTTEEEEEEEEECCCCSSEEEEEHHHHHH----TTCEEEE-CCSCCHHHHHHHHHHHHTT
T ss_pred CcccccccccchHHH-HHHHHhcCCcEEEEEEecCCCccCCHHHHHh----CCcEEEE-EeecCHHHHHHHHHHHHCc
Confidence 778888988888886 5799999999999999765 3456555554 3344443 3334555555588999887
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.59 E-value=8.1e-15 Score=118.95 Aligned_cols=102 Identities=25% Similarity=0.304 Sum_probs=88.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEcc----CChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTT----ENADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~----G~~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+|+.++++|++|+++|+...+. .....++...++++.++.+|+|+.++ .+.++++.+
T Consensus 41 ~l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~-~~~~~~~~~~~l~ell~~sDiv~~~~Plt~~T~~lin~~ 119 (184)
T d1ygya1 41 EIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPA-RAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKE 119 (184)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHH-HHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHH
T ss_pred cccceeeeeccccchhHHHHHHhhhccceEEeecCCCChh-HHhhcCceeccHHHHHhhCCEEEEcCCCCchhhhhhhHH
Confidence 5789999999999999999999999999999999876543 44455666778999999999999874 357889999
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+++++||+||++. +|.+++..
T Consensus 120 ~l~~mk~~a~lIN~sRG~i-Vde~aL~~ 146 (184)
T d1ygya1 120 ALAKTKPGVIIVNAARGGL-VDEAALAD 146 (184)
T ss_dssp HHTTSCTTEEEEECSCTTS-BCHHHHHH
T ss_pred HHhhhCCCceEEEecchhh-hhhHHHHH
Confidence 9999999999999999974 88888865
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.58 E-value=4.5e-15 Score=119.34 Aligned_cols=114 Identities=18% Similarity=0.191 Sum_probs=90.0
Q ss_pred hhccccc-hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH------
Q 037949 43 LYGFRHS-LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR------ 113 (243)
Q Consensus 43 ~~~~~~~-~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~------ 113 (243)
+++|+-. .||++.+..+ ..+|++|+|+|+|+||+..++.++.+|+ +|+++|+++.|++.+++.|++ +++.
T Consensus 8 ~l~Ca~~T~~~a~~~~a~-v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~ 86 (174)
T d1e3ia2 8 LIGCGFSSGYGAAINTAK-VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKP 86 (174)
T ss_dssp GGGTHHHHHHHHHHTTSC-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSC
T ss_pred HhhhHHHHHHHHHHHhhC-CCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhh
Confidence 3456433 5778754333 4799999999999999999999999999 788999999999999999985 3332
Q ss_pred -Hhhh-----cCCcEEEEccCChhcccHHHHccCCCC-eEEEEecCCCCCCC
Q 037949 114 -EDVV-----SEAGLFVTTTENADIIMVRHMKQMKNA-AIVCNIGHFDNEID 158 (243)
Q Consensus 114 -~~~~-----~~aDvvi~a~G~~~~i~~~~l~~l~~g-~~vvnvg~~~~~id 158 (243)
.... .++|++++|+|++.+++ +.++.++++ |+++.+|....++.
T Consensus 87 ~~~~~~~~~~~G~d~vie~~G~~~~~~-~a~~~~~~g~G~~v~vG~~~~~~~ 137 (174)
T d1e3ia2 87 VQDVITELTAGGVDYSLDCAGTAQTLK-AAVDCTVLGWGSCTVVGAKVDEMT 137 (174)
T ss_dssp HHHHHHHHHTSCBSEEEESSCCHHHHH-HHHHTBCTTTCEEEECCCSSSEEE
T ss_pred hhhhHhhhhcCCCcEEEEecccchHHH-HHHHHhhcCCeEEEecCCCCCccc
Confidence 1111 47999999999999886 579999996 99999998754433
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=99.57 E-value=5.3e-15 Score=121.50 Aligned_cols=101 Identities=20% Similarity=0.233 Sum_probs=84.6
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEcc----CChhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTT----ENADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~----G~~~~i~~ 135 (243)
..+.|++|+|+|+|.||+.+|++++++|++|+++|+.+... ....+...++++.++.+|+++.++ .+.++++.
T Consensus 41 ~~l~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~---~~~~~~~~~l~~l~~~~D~v~~~~plt~~T~~li~~ 117 (199)
T d1dxya1 41 KELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG---DHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINE 117 (199)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS---CCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCH
T ss_pred ccccceeeeeeecccccccccccccccceeeeccCCccchh---hhcchhHHHHHHHHHhcccceeeecccccccccccH
Confidence 35889999999999999999999999999999999865431 122344567888899999998875 34678999
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|+.||+++++||+||++. +|.+++..
T Consensus 118 ~~l~~mk~~a~lIN~aRG~v-vde~aL~~ 145 (199)
T d1dxya1 118 AAFNLMKPGAIVINTARPNL-IDTQAMLS 145 (199)
T ss_dssp HHHHHSCTTEEEEECSCTTS-BCHHHHHH
T ss_pred HHhhccCCceEEEecccHhh-hhhHHHHH
Confidence 99999999999999999974 89888865
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.57 E-value=1e-15 Score=123.16 Aligned_cols=102 Identities=26% Similarity=0.286 Sum_probs=85.6
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----Hhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----EDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~~~----- 117 (243)
.||+++++. ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.|++.+.+.|++ +++. .+.+
T Consensus 16 a~~a~~~a~--~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~~~~v~~~t~ 93 (174)
T d1jqba2 16 GFHGAELAD--IEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTN 93 (174)
T ss_dssp HHHHHHHTT--CCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCHHHHHHHHTT
T ss_pred HHHHHHHhC--CCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccccchhHHHHHHHHhh
Confidence 478887754 4689999999999999999999999999 799999999999889999974 4432 2211
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++|++|+|+|++..++ +.++.++++|+++.+|..+
T Consensus 94 g~G~D~vid~~g~~~~~~-~a~~~~~~~G~iv~~G~~~ 130 (174)
T d1jqba2 94 GKGVDRVIMAGGGSETLS-QAVKMVKPGGIISNINYHG 130 (174)
T ss_dssp TSCEEEEEECSSCTTHHH-HHHHHEEEEEEEEECCCCC
T ss_pred ccCcceEEEccCCHHHHH-HHHHHHhcCCEEEEEeecC
Confidence 35999999999988886 5799999999999999764
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=99.56 E-value=1.4e-14 Score=118.46 Aligned_cols=103 Identities=24% Similarity=0.209 Sum_probs=86.1
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccC----Chhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|+..... .....++. ..++++.++.+|+|+.++. +.++++
T Consensus 45 ~eL~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~-~~~~~~~~~~~~l~~ll~~sD~i~~~~plt~~T~~li~ 123 (193)
T d1mx3a1 45 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIN 123 (193)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBS
T ss_pred eeeeCceEEEeccccccccceeeeeccccceeeccCccccc-chhhhccccccchhhccccCCEEEEeecccccchhhhh
Confidence 35899999999999999999999999999999999875542 22334543 4578899999999988753 567899
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.|+.||+++++||+||++. +|.+++..
T Consensus 124 ~~~l~~mk~~a~lIN~sRG~i-vde~aL~~ 152 (193)
T d1mx3a1 124 DFTVKQMRQGAFLVNTARGGL-VDEKALAQ 152 (193)
T ss_dssp HHHHTTSCTTEEEEECSCTTS-BCHHHHHH
T ss_pred HHHHhccCCCCeEEecCCceE-EcHHHHHH
Confidence 999999999999999999974 88888865
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=99.56 E-value=1e-14 Score=119.57 Aligned_cols=102 Identities=17% Similarity=0.223 Sum_probs=86.6
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEcc----CChhcccH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTT----ENADIIMV 135 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~----G~~~~i~~ 135 (243)
..+.|++|+|+|+|.||+.+|++++++|++|+++|+.... .....++...++++.++.+|+++.++ .+.++++.
T Consensus 39 ~el~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~--~~~~~~~~~~~l~~~l~~sDii~~~~plt~~T~~li~~ 116 (197)
T d1j4aa1 39 REVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNP--ELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMIND 116 (197)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSH
T ss_pred ccccCCeEEEecccccchhHHHhHhhhcccccccCccccc--ccccceeeeccccccccccccccccCCccccccccccH
Confidence 3589999999999999999999999999999999876553 22334566677899999999999875 35678999
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|+.|++++++||+||++. +|.+++..
T Consensus 117 ~~l~~mk~~a~lIN~sRG~i-vde~aL~~ 144 (197)
T d1j4aa1 117 ESIAKMKQDVVIVNVSRGPL-VDTDAVIR 144 (197)
T ss_dssp HHHHHSCTTEEEEECSCGGG-BCHHHHHH
T ss_pred HHHhhhCCccEEEecCchhh-hhhHHHHH
Confidence 99999999999999999974 88888755
|
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=99.55 E-value=7.9e-16 Score=133.10 Aligned_cols=40 Identities=40% Similarity=0.626 Sum_probs=36.9
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFD 41 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~ 41 (243)
+++++.|+.|+|+||++||++|.++|.|.|| |+.+|+.|+
T Consensus 187 ~~~~i~GvsEETTTGV~RL~~m~~~g~L~fPainVNDsvtK~~F~ 231 (313)
T d1v8ba2 187 IAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYD 231 (313)
T ss_dssp HHTTCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTTH
T ss_pred hhhcEEEEeCCCCccHHhHHHHHHcCcceeeeEecCcccCHHHhC
Confidence 4678999999999999999999999999999 999998874
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.55 E-value=3.2e-15 Score=120.42 Aligned_cols=144 Identities=15% Similarity=0.103 Sum_probs=102.2
Q ss_pred cchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhh---h
Q 037949 48 HSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDV---V 117 (243)
Q Consensus 48 ~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~---~ 117 (243)
...|+++.+... ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|+++.|++.+++.|++ +++ ..+. +
T Consensus 14 ~ta~~al~~~~~-~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i 92 (182)
T d1vj0a2 14 ATAYHAFDEYPE-SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAI 92 (182)
T ss_dssp HHHHHHHHTCSS-CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccccchHHHHHHH
Confidence 346788865433 4689999999999999999999999999 899999999999999999975 332 2111 1
Q ss_pred ------cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhH
Q 037949 118 ------SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGI 189 (243)
Q Consensus 118 ------~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai 189 (243)
.++|+||+|+|++..++ ..++.++++|+++.+|... .+++.+..... ..+++.+.+ +..|...++++++
T Consensus 93 ~~~~~~~g~Dvvid~vG~~~~~~-~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l-~~k~l~i~G-~~~~~~~~~~~~~ 169 (182)
T d1vj0a2 93 MDITHGRGADFILEATGDSRALL-EGSELLRRGGFYSVAGVAVPQDPVPFKVYEWL-VLKNATFKG-IWVSDTSHFVKTV 169 (182)
T ss_dssp HHHTTTSCEEEEEECSSCTTHHH-HHHHHEEEEEEEEECCCCSCCCCEEECHHHHT-TTTTCEEEE-CCCCCHHHHHHHH
T ss_pred HHhhCCCCceEEeecCCchhHHH-HHHHHhcCCCEEEEEeecCCCCccccccHHHH-HHCCcEEEE-EEeCCHHHHHHHH
Confidence 25899999999988775 5799999999999999753 33443332210 013344443 3334444444477
Q ss_pred HhhhcC
Q 037949 190 IILAER 195 (243)
Q Consensus 190 ~ll~~G 195 (243)
++++++
T Consensus 170 ~~i~~~ 175 (182)
T d1vj0a2 170 SITSRN 175 (182)
T ss_dssp HHHHTC
T ss_pred HHHHHC
Confidence 887754
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.54 E-value=8.2e-15 Score=116.52 Aligned_cols=139 Identities=12% Similarity=0.058 Sum_probs=106.2
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHh-hh---
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----RED-VV--- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~-~~--- 117 (243)
.+|++++.. ..+|++|+|+|+ |++|+.+++.++..|+ +|+++|.++.|++.+.+.|++ +++ ..+ ..
T Consensus 16 a~~al~~~~--~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~ 93 (170)
T d1jvba2 16 TYRAVRKAS--LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRIT 93 (170)
T ss_dssp HHHHHHHTT--CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHHhC--CCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHh
Confidence 578887653 468999999995 8999999999999996 899999999999889888874 222 212 11
Q ss_pred --cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh
Q 037949 118 --SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA 193 (243)
Q Consensus 118 --~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~ 193 (243)
.++|++++|+|++..++ ..++.++++|+++.+|... .+++...+.. ++ +.+.+ +..+.+.+.+++++|++
T Consensus 94 ~~~~~d~vid~~g~~~~~~-~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~-k~---i~i~G-s~~~~~~d~~~~l~lv~ 167 (170)
T d1jvba2 94 ESKGVDAVIDLNNSEKTLS-VYPKALAKQGKYVMVGLFGADLHYHAPLITL-SE---IQFVG-SLVGNQSDFLGIMRLAE 167 (170)
T ss_dssp TTSCEEEEEESCCCHHHHT-TGGGGEEEEEEEEECCSSCCCCCCCHHHHHH-HT---CEEEE-CCSCCHHHHHHHHHHHH
T ss_pred hcccchhhhcccccchHHH-hhhhhcccCCEEEEeccccCccccCHHHHHh-CC---cEEEE-EecCCHHHHHHHHHHHH
Confidence 35899999999988886 4799999999999999874 4577666654 34 34433 22345556565889999
Q ss_pred cCC
Q 037949 194 ERL 196 (243)
Q Consensus 194 ~G~ 196 (243)
+||
T Consensus 168 ~GK 170 (170)
T d1jvba2 168 AGK 170 (170)
T ss_dssp TTS
T ss_pred cCC
Confidence 986
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=99.54 E-value=2.4e-14 Score=116.78 Aligned_cols=104 Identities=15% Similarity=0.111 Sum_probs=85.5
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-CCcccCHHhhhcCCcEEEEcc----CChhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-GIPVLTREDVVSEAGLFVTTT----ENADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G~~~~~~~~~~~~aDvvi~a~----G~~~~i~ 134 (243)
..+.|++++|+|+|.||+.+|++++.+|++|+++|+........... +....++++.++.+|+|+.++ .+.++++
T Consensus 43 ~~l~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll~~sD~v~l~~plt~~T~~li~ 122 (191)
T d1gdha1 43 EKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFN 122 (191)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred ceecccceEEeecccchHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHHhhCCeEEecCCCCchHhheec
Confidence 35789999999999999999999999999999999865533222222 333457889999999998875 3568899
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.|+.||+++++||+||++ -+|.+++..
T Consensus 123 ~~~l~~mk~~a~lIN~sRG~-ivde~aL~~ 151 (191)
T d1gdha1 123 KATIKSLPQGAIVVNTARGD-LVDNELVVA 151 (191)
T ss_dssp HHHHTTSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred HHHhhCcCCccEEEecCCcc-chhhHHHHH
Confidence 99999999999999999997 488888754
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=99.52 E-value=5.8e-14 Score=114.12 Aligned_cols=104 Identities=14% Similarity=0.092 Sum_probs=86.6
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-cccCHHhhhcCCcEEEEcc----CChhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-PVLTREDVVSEAGLFVTTT----ENADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~~~~~~~~~~~aDvvi~a~----G~~~~i~ 134 (243)
..+.|++++|+|+|.||+.+|++++++|++|+++|+.+.........+. ...++++.++.+|+|+.+. -+.++++
T Consensus 40 ~~l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~T~~li~ 119 (188)
T d2naca1 40 YDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMIN 119 (188)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBS
T ss_pred eeccccceeeccccccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccccchhhhH
Confidence 3578999999999999999999999999999999986544333334444 3567889999999998874 3568899
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.|+.||+++++||+||++ -+|.+++..
T Consensus 120 ~~~l~~mk~ga~lIN~aRG~-ivd~~aL~~ 148 (188)
T d2naca1 120 DETLKLFKRGAYIVNTARGK-LCDRDAVAR 148 (188)
T ss_dssp HHHHTTSCTTEEEEECSCGG-GBCHHHHHH
T ss_pred HHHHHhCCCCCEEEecCchh-hhhHHHHHH
Confidence 99999999999999999997 488888865
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.52 E-value=8.7e-15 Score=115.71 Aligned_cols=140 Identities=17% Similarity=0.129 Sum_probs=104.9
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cC-----HHh----hhcC
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LT-----RED----VVSE 119 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~-----~~~----~~~~ 119 (243)
.|+++++.. ..+|++|+|.|+|+||+.+++.++..|++|++++.++.|+..+++.|++. .+ ..+ ...+
T Consensus 16 a~~al~~~~--~~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~ 93 (168)
T d1rjwa2 16 TYKALKVTG--AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGG 93 (168)
T ss_dssp HHHHHHHHT--CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSS
T ss_pred HHHHHHHhC--CCCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCC
Confidence 478887654 46899999999999999999999999999999999999999999999863 22 222 2346
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC--CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
.|.++++++....++ ..++.++++|+++.+|....+ ++...+.. ++ +.+.. +..+...+.+++++++++|+|
T Consensus 94 ~~~~v~~~~~~~~~~-~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~-~~---~~i~g-s~~~~~~~~~~~l~l~~~Gki 167 (168)
T d1rjwa2 94 VHAAVVTAVSKPAFQ-SAYNSIRRGGACVLVGLPPEEMPIPIFDTVL-NG---IKIIG-SIVGTRKDLQEALQFAAEGKV 167 (168)
T ss_dssp EEEEEESSCCHHHHH-HHHHHEEEEEEEEECCCCSSEEEEEHHHHHH-TT---CEEEE-CCSCCHHHHHHHHHHHHTTSC
T ss_pred CceEEeecCCHHHHH-HHHHHhccCCceEecccccCCCCCCHHHHHH-CC---cEEEE-EeeCCHHHHHHHHHHHHhCCC
Confidence 777778888888786 589999999999999987633 44444443 23 33432 222334445558899999986
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.51 E-value=4e-14 Score=113.50 Aligned_cols=148 Identities=16% Similarity=0.163 Sum_probs=101.9
Q ss_pred hccccc-hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------
Q 037949 44 YGFRHS-LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR------- 113 (243)
Q Consensus 44 ~~~~~~-~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~------- 113 (243)
++|+-. .|+++.+..+ ..+|++|+|+|+|++|+.+++.++..|+ +|+++|++++|++.+.+.|++ +++.
T Consensus 8 lgCa~~Ta~~a~~~~a~-~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~ 86 (174)
T d1p0fa2 8 IGCGFATGYGAAVNTAK-VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPI 86 (174)
T ss_dssp GGTHHHHHHHHHHTTTC-CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCH
T ss_pred hhhHHHHHHHHHHHhhC-CCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHH
Confidence 455433 5777654333 5799999999999999999999999998 799999999999999999985 4432
Q ss_pred Hhhh-----cCCcEEEEccCChhcccHHHHccCCC-CeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCee-eeEccC
Q 037949 114 EDVV-----SEAGLFVTTTENADIIMVRHMKQMKN-AAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTD-PWVFPQ 184 (243)
Q Consensus 114 ~~~~-----~~aDvvi~a~G~~~~i~~~~l~~l~~-g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~-~~~~~~ 184 (243)
.+.. .++|++++++|++..+.. .+..+++ +++++.+|... .+++++......+ +++..... .+...+
T Consensus 87 ~~~~~~~~~~G~d~vid~~g~~~~~~~-~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~---~~i~Gs~~G~~~~~d 162 (174)
T d1p0fa2 87 YEVICEKTNGGVDYAVECAGRIETMMN-ALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTG---RSLKGSVFGGFKGEE 162 (174)
T ss_dssp HHHHHHHTTSCBSEEEECSCCHHHHHH-HHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTT---CEEEECSGGGCCGGG
T ss_pred HHHHHHhcCCCCcEEEEcCCCchHHHH-HHHHHHHhcCceEEEEEecCccccccCHHHHhCC---CEEEEEEeCCCCHHH
Confidence 1111 369999999999988764 5666655 59999999764 3344432222112 33432211 233334
Q ss_pred chhhHHhhhcCC
Q 037949 185 TRRGIIILAERL 196 (243)
Q Consensus 185 ~~~ai~ll~~G~ 196 (243)
..+.++++.+|+
T Consensus 163 ~~~lidl~~~gK 174 (174)
T d1p0fa2 163 VSRLVDDYMKKK 174 (174)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHcCC
Confidence 444778888875
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.51 E-value=2.5e-14 Score=114.48 Aligned_cols=148 Identities=16% Similarity=0.134 Sum_probs=104.7
Q ss_pred hhccccc-hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HH
Q 037949 43 LYGFRHS-LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----RE 114 (243)
Q Consensus 43 ~~~~~~~-~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~ 114 (243)
+++|.-. .|+++.+..+ ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.|++.+++.|++ +++ ..
T Consensus 8 pl~ca~~Ta~~a~~~~~~-~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~ 86 (174)
T d1f8fa2 8 PLGCGIQTGAGACINALK-VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPV 86 (174)
T ss_dssp GGGTHHHHHHHHHHTTTC-CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHH
T ss_pred HHhhHHHHHHHHHHHhhC-CCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCHH
Confidence 4455432 4677655444 4689999999999999999999999999 567789999999889988874 432 22
Q ss_pred hhh-----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCee-eeE-cc
Q 037949 115 DVV-----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTD-PWV-FP 183 (243)
Q Consensus 115 ~~~-----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~-~~~-~~ 183 (243)
+.+ .++|++++|+|+...++ ..++.++++|+++.+|... .+++...+.. +++ .+..... .+. ..
T Consensus 87 ~~i~~~t~gg~D~vid~~G~~~~~~-~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~-k~~---~i~Gs~~g~~~~~~ 161 (174)
T d1f8fa2 87 AAIKEITDGGVNFALESTGSPEILK-QGVDALGILGKIAVVGAPQLGTTAQFDVNDLLL-GGK---TILGVVEGSGSPKK 161 (174)
T ss_dssp HHHHHHTTSCEEEEEECSCCHHHHH-HHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHH-TTC---EEEECSGGGSCHHH
T ss_pred HHHHHHcCCCCcEEEEcCCcHHHHH-HHHhcccCceEEEEEeecCCCcccccCHHHHHH-CCC---EEEEEEecCCChHH
Confidence 222 25899999999998886 5799999999999999753 3466666655 343 3433211 111 12
Q ss_pred CchhhHHhhhcCC
Q 037949 184 QTRRGIIILAERL 196 (243)
Q Consensus 184 ~~~~ai~ll~~G~ 196 (243)
+.+++++|+++||
T Consensus 162 ~~~~~~~l~~~Gk 174 (174)
T d1f8fa2 162 FIPELVRLYQQGK 174 (174)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCC
Confidence 2333789999886
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=99.49 E-value=5.7e-14 Score=113.62 Aligned_cols=98 Identities=21% Similarity=0.251 Sum_probs=82.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEcc----CChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTT----ENADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~----G~~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+++.++.+|++|+++|+++... ......++++.++.+|+|+.++ .+.++++.+
T Consensus 39 ~l~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~~-----~~~~~~~l~ell~~sDiv~~~~pl~~~t~~li~~~ 113 (181)
T d1qp8a1 39 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKEG-----PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQ 113 (181)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCCS-----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHH
T ss_pred cccCceEEEeccccccccceeeeecccccccccccccccc-----ceeeeechhhhhhccchhhcccccccccccccccc
Confidence 4789999999999999999999999999999999876421 1112346788999999999875 456889999
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+++++||+||++. +|.+++..
T Consensus 114 ~l~~mk~~ailIN~~RG~i-vd~~aL~~ 140 (181)
T d1qp8a1 114 HLALMAEDAVFVNVGRAEV-LDRDGVLR 140 (181)
T ss_dssp HHTTSCTTCEEEECSCGGG-BCHHHHHH
T ss_pred eeeeccccceEEecccccc-ccchhhhh
Confidence 9999999999999999974 88888755
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=9.8e-14 Score=112.73 Aligned_cols=100 Identities=16% Similarity=0.195 Sum_probs=83.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+|+.++.+|++|+++|+..... ......+.++++.++.+|+++.+.. +.++++.+
T Consensus 41 ~l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~---~~~~~~~~~l~ell~~sDii~i~~plt~~T~~li~~~ 117 (188)
T d1sc6a1 41 EARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP---LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAK 117 (188)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC---CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHH
T ss_pred cccceEEEEeecccchhhhhhhcccccceEeeccccccch---hhhhhhhhhHHHHHhhccceeecccCCcchhhhccHH
Confidence 5789999999999999999999999999999998865421 1112234578899999999988743 45889999
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.|++++++||++|++. +|.++|..
T Consensus 118 ~l~~mk~~a~lIN~aRG~l-vde~aL~~ 144 (188)
T d1sc6a1 118 EISLMKPGSLLINASRGTV-VDIPALAD 144 (188)
T ss_dssp HHHHSCTTEEEEECSCSSS-BCHHHHHH
T ss_pred HHhhCCCCCEEEEcCcHHh-hhhHHHHH
Confidence 9999999999999999974 88888865
|
| >d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=3.7e-14 Score=119.55 Aligned_cols=54 Identities=33% Similarity=0.486 Sum_probs=50.1
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhh
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLM 55 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~ 55 (243)
+++.++|+.|+|+||++||++|.++|.|.|| ||.+|+.|++.|+++.|++.+++
T Consensus 144 ~~~~i~G~~EETTTGV~RL~am~~~g~L~fP~i~VNDa~tK~~F~~~~~~~~Sf~~q~l 202 (267)
T d1li4a2 144 LLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFHPSFVMSNSFTNQVM 202 (267)
T ss_dssp GGGGCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTTSCHHHHHHHHHHHHH
T ss_pred ccCccEEecccccHHHHHHHHHHHCCCCCcceEECCCcchhhhcchhHHHHHHHHHHHH
Confidence 5788999999999999999999999999999 99999999999999998887754
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.37 E-value=1.9e-12 Score=103.73 Aligned_cols=110 Identities=19% Similarity=0.280 Sum_probs=86.0
Q ss_pred hhccccc-hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCHHh----
Q 037949 43 LYGFRHS-LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTRED---- 115 (243)
Q Consensus 43 ~~~~~~~-~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~~~---- 115 (243)
.++|.-. .|+++.+..+ ..+|++|+|+|+|++|+..++.++.+|+ +|+++|++++|++.|++.|++ +++..+
T Consensus 9 ~l~Ca~~T~~~Av~~~~~-~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~ 87 (176)
T d1d1ta2 9 LIGCGFSTGYGAAVKTGK-VKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKP 87 (176)
T ss_dssp GGGTHHHHHHHHHHTTSC-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSC
T ss_pred hhhhHHHHHHHHHHHhhC-CCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchH
Confidence 3455543 4788755433 4689999999999999999999999997 899999999999999999986 443211
Q ss_pred ---h---h--cCCcEEEEccCChhcccHHHHccCC-CCeEEEEecCCC
Q 037949 116 ---V---V--SEAGLFVTTTENADIIMVRHMKQMK-NAAIVCNIGHFD 154 (243)
Q Consensus 116 ---~---~--~~aDvvi~a~G~~~~i~~~~l~~l~-~g~~vvnvg~~~ 154 (243)
. . .++|++++++|.+..+. ..+..+. .+|+++.+|...
T Consensus 88 ~~~~~~~~~g~G~d~vi~~~g~~~~~~-~a~~~~~~~~G~~v~vG~~~ 134 (176)
T d1d1ta2 88 ISEVLSEMTGNNVGYTFEVIGHLETMI-DALASCHMNYGTSVVVGVPP 134 (176)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCHHHHH-HHHTTSCTTTCEEEECSCCC
T ss_pred HHHHHHHhccccceEEEEeCCchHHHH-HHHHHhhcCCeEEEEEEccc
Confidence 1 1 37999999999988775 3566664 559999999874
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.34 E-value=2.4e-12 Score=104.90 Aligned_cols=102 Identities=20% Similarity=0.204 Sum_probs=83.0
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcc-cC-----HHh----hh-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPV-LT-----RED----VV- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~-~~-----~~~----~~- 117 (243)
.||++.++. ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.|++.|.+.|++. ++ +.+ ..
T Consensus 14 a~~a~~~a~--v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~i~~~t~ 91 (195)
T d1kola2 14 GYHGAVTAG--VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLG 91 (195)
T ss_dssp HHHHHHHTT--CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHS
T ss_pred HHHHHHHhC--CCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCcCHHHHHHHHhC
Confidence 468887653 4689999999999999999999999999 8999999999999999999863 22 211 11
Q ss_pred -cCCcEEEEccCC---------------hhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 -SEAGLFVTTTEN---------------ADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 -~~aDvvi~a~G~---------------~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++|++++|+|. +..++ +.++.++++|+++.+|.+.
T Consensus 92 g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~-~~~~~~r~gG~v~~~G~~~ 143 (195)
T d1kola2 92 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLN-SLMQVTRVAGKIGIPGLYV 143 (195)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHH-HHHHHEEEEEEEEECSCCC
T ss_pred CCCcEEEEECccccccCCcccceeecCcHHHHH-HHHHHHhcCCEEEEeeecC
Confidence 268999999883 34565 5789999999999999864
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.32 E-value=1.9e-12 Score=103.19 Aligned_cols=110 Identities=18% Similarity=0.181 Sum_probs=84.5
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhh------hcCCc
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDV------VSEAG 121 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~------~~~aD 121 (243)
.|+++.+. + ..+|++|+|.|+ |++|+.+++.++.+|++|++++.++.+++.+++.|++ +++..+. -.++|
T Consensus 16 A~~al~~~-~-~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D 93 (171)
T d1iz0a2 16 AYLALKRA-Q-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLD 93 (171)
T ss_dssp HHHHHHHT-T-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEE
T ss_pred HHHHHHHh-C-CCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeehhhhhhhhhcccccc
Confidence 46777664 3 469999999996 8999999999999999999999999988888889985 4443221 25799
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
++++|+|. .++ +.++.++++|+++.+|... .+++...+..
T Consensus 94 ~v~d~~G~--~~~-~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~ 136 (171)
T d1iz0a2 94 LVLEVRGK--EVE-ESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMR 136 (171)
T ss_dssp EEEECSCT--THH-HHHTTEEEEEEEEEC-------CCCCTTHHHH
T ss_pred ccccccch--hHH-HHHHHHhcCCcEEEEeCCCCCCCCccHHHHHH
Confidence 99999883 454 5799999999999998653 3466666654
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.29 E-value=1.3e-11 Score=97.86 Aligned_cols=148 Identities=14% Similarity=0.108 Sum_probs=97.4
Q ss_pred hhccccc-hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCHH-----
Q 037949 43 LYGFRHS-LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTRE----- 114 (243)
Q Consensus 43 ~~~~~~~-~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~~----- 114 (243)
+++|+-. .|+++.+..+ ..+|++|+|+|+|++|..+++.++..|+ +|+++|++++|++.+.+.|++ +++..
T Consensus 8 ~l~ca~~Tay~a~~~~a~-~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~ 86 (175)
T d1cdoa2 8 LLGCGVSTGFGAAVNTAK-VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEP 86 (175)
T ss_dssp GGGTHHHHHHHHHHTTTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSC
T ss_pred HhhcHHHHHHHHHHHhhC-CCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchh
Confidence 3455432 4778754333 4799999999999999999999999998 799999999999999999985 44421
Q ss_pred --hhh-----cCCcEEEEccCChhcccHHHHccCCCC-eEEEEecCCCC--CCChhHHHHhhcCeEEEeecCee-ee-Ec
Q 037949 115 --DVV-----SEAGLFVTTTENADIIMVRHMKQMKNA-AIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTD-PW-VF 182 (243)
Q Consensus 115 --~~~-----~~aDvvi~a~G~~~~i~~~~l~~l~~g-~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~-~~-~~ 182 (243)
+.. .++|++++++|...++. ..+..++++ ++++.+|..+. .++...+.. ++ +++..... .+ ..
T Consensus 87 ~~~~~~~~~~~G~d~vid~~G~~~~~~-~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~---~~i~Gs~~G~~~~~ 161 (175)
T d1cdoa2 87 ISQVLSKMTNGGVDFSLECVGNVGVMR-NALESCLKGWGVSVLVGWTDLHDVATRPIQLI-AG---RTWKGSMFGGFKGK 161 (175)
T ss_dssp HHHHHHHHHTSCBSEEEECSCCHHHHH-HHHHTBCTTTCEEEECSCCSSSCEEECHHHHH-TT---CEEEECSGGGCCHH
T ss_pred HHHHHHhhccCCcceeeeecCCHHHHH-HHHHHhhCCCcceeEEEecCCcccCccHHHHH-CC---cEEEEEEEeCCcHH
Confidence 111 36999999999988775 356665554 66666776542 233333333 22 33432111 11 11
Q ss_pred cCchhhHHhhhcCC
Q 037949 183 PQTRRGIIILAERL 196 (243)
Q Consensus 183 ~~~~~ai~ll~~G~ 196 (243)
.+..+.++++++|+
T Consensus 162 ~d~~~~i~l~~~gK 175 (175)
T d1cdoa2 162 DGVPKMVKAYLDKK 175 (175)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCC
Confidence 23333778888875
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.28 E-value=6.9e-12 Score=99.44 Aligned_cols=108 Identities=18% Similarity=0.201 Sum_probs=83.0
Q ss_pred hhccccc-hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH------
Q 037949 43 LYGFRHS-LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR------ 113 (243)
Q Consensus 43 ~~~~~~~-~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~------ 113 (243)
+++|+-. .|+++.+..+ ..+|++|+|.|+|++|...++.++.+|+ +|+++|.++.+++.+++.|++ +++.
T Consensus 8 ~l~ca~~Tay~al~~~~~-~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~ 86 (176)
T d2fzwa2 8 LLGCGISTGYGAAVNTAK-LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKP 86 (176)
T ss_dssp GGGTHHHHHHHHHHTTTC-CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSC
T ss_pred HhhcHHHHHHHHHHHhhC-CCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhH
Confidence 3455543 5888754333 4699999999999999999999999997 788899999999889999975 3332
Q ss_pred -Hhhh-----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecC
Q 037949 114 -EDVV-----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 114 -~~~~-----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.+.+ .++|++++++|++.++. ..+..+++++.++.++.
T Consensus 87 ~~~~~~~~~~~g~D~vid~~G~~~~~~-~~~~~~~~g~~~~~v~~ 130 (176)
T d2fzwa2 87 IQEVLIEMTDGGVDYSFECIGNVKVMR-AALEACHKGWGVSVVVG 130 (176)
T ss_dssp HHHHHHHHTTSCBSEEEECSCCHHHHH-HHHHTBCTTTCEEEECS
T ss_pred HHHHHHHHcCCCCcEeeecCCCHHHHH-HHHHhhcCCceeEEEEe
Confidence 1111 36999999999988775 47888888877666543
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.28 E-value=1.6e-12 Score=103.51 Aligned_cols=112 Identities=20% Similarity=0.237 Sum_probs=85.5
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|+++.+..+ ..+|++|+|+|+ |+||+.+++.++.+|++|++++.++++.+.+++.|++ +++ ..+.+
T Consensus 16 A~~al~~~~~-~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~i~~~t~ 94 (174)
T d1yb5a2 16 AYRALIHSAC-VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVG 94 (174)
T ss_dssp HHHHHHTTSC-CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHC
T ss_pred HHHHHHHHhC-CCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccccccccccHHHHhhhhhc
Confidence 4567654333 468999999996 9999999999999999999999999888888888985 332 22222
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC-CCCChhHHHH
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD-NEIDMLDLEA 164 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~-~~id~~~l~~ 164 (243)
.+.|++++|+|.+ .++ ..++.++++|+++.+|..+ .+++...+..
T Consensus 95 ~~g~d~v~d~~g~~-~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~ 141 (174)
T d1yb5a2 95 EKGIDIIIEMLANV-NLS-KDLSLLSHGGRVIVVGSRGTIEINPRDTMA 141 (174)
T ss_dssp TTCEEEEEESCHHH-HHH-HHHHHEEEEEEEEECCCCSCEEECTHHHHT
T ss_pred cCCceEEeecccHH-HHH-HHHhccCCCCEEEEEecCCCCCCCHHHHHH
Confidence 3589999999864 564 4789999999999998654 3455555544
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.25 E-value=2.1e-11 Score=96.95 Aligned_cols=110 Identities=18% Similarity=0.251 Sum_probs=83.4
Q ss_pred hhcccc-chhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH------
Q 037949 43 LYGFRH-SLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR------ 113 (243)
Q Consensus 43 ~~~~~~-~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~------ 113 (243)
.++|+- ..|+++.+..+ ..+|++|+|+|+|++|..+++.++.+|+ +|+++|+++.|++.+.+.|++ +++.
T Consensus 8 ~l~ca~~Tay~al~~~~~-vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~ 86 (176)
T d2jhfa2 8 LIGCGFSTGYGSAVKVAK-VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKP 86 (176)
T ss_dssp GGGTHHHHHHHHHHTTTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSC
T ss_pred HhhcHHHHHHHHHHHhhC-CCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhH
Confidence 445553 35788754433 5799999999999999999999999997 899999999999889998875 3321
Q ss_pred -Hhhh-----cCCcEEEEccCChhcccHHHHccCCCC-eEEEEecCCC
Q 037949 114 -EDVV-----SEAGLFVTTTENADIIMVRHMKQMKNA-AIVCNIGHFD 154 (243)
Q Consensus 114 -~~~~-----~~aDvvi~a~G~~~~i~~~~l~~l~~g-~~vvnvg~~~ 154 (243)
.+.. .++|++++++|.+..+. ..+..++++ ++++..+..+
T Consensus 87 ~~~~~~~~~~~G~D~vid~~G~~~~~~-~a~~~~~~~~g~~~~~~~~~ 133 (176)
T d2jhfa2 87 IQEVLTEMSNGGVDFSFEVIGRLDTMV-TALSCCQEAYGVSVIVGVPP 133 (176)
T ss_dssp HHHHHHHHTTSCBSEEEECSCCHHHHH-HHHHHBCTTTCEEEECSCCC
T ss_pred HHHHHHHHhcCCCCEEEecCCchhHHH-HHHHHHhcCCcceEEecCCC
Confidence 1111 37999999999998876 467778776 5666666543
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=99.02 E-value=7.6e-10 Score=87.49 Aligned_cols=92 Identities=20% Similarity=0.194 Sum_probs=75.2
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC---Ccc--cC---HHhhhcCCcEEEEcc---C--
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG---IPV--LT---REDVVSEAGLFVTTT---E-- 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G---~~~--~~---~~~~~~~aDvvi~a~---G-- 128 (243)
.+..+|+|+|+|..|+..++.++.+|++|.++|.++.++++..... .+. .+ +.+.++++|+||.+. |
T Consensus 30 v~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~~ 109 (168)
T d1pjca1 30 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR 109 (168)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSS
T ss_pred CCCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCcc
Confidence 3568999999999999999999999999999999999876554432 121 11 456678999999985 3
Q ss_pred ChhcccHHHHccCCCCeEEEEecCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.|.+++.++++.||+|+++|.++.-
T Consensus 110 aP~lIt~~mv~~Mk~GSVIVDvaid 134 (168)
T d1pjca1 110 APILVPASLVEQMRTGSVIVDVAVD 134 (168)
T ss_dssp CCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred cCeeecHHHHhhcCCCcEEEEeecC
Confidence 4678999999999999999998874
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=99.01 E-value=1.2e-09 Score=87.42 Aligned_cols=92 Identities=20% Similarity=0.217 Sum_probs=74.8
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC-----------------------------
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT----------------------------- 112 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~----------------------------- 112 (243)
.+.-+|+|+|+|..|+..++.++.+||+|.++|.++.++++....+...++
T Consensus 27 V~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 27 VPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred cCCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 456799999999999999999999999999999999988777766542211
Q ss_pred -HHhhhcCCcEEEEcc---C--ChhcccHHHHccCCCCeEEEEecCC
Q 037949 113 -REDVVSEAGLFVTTT---E--NADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 113 -~~~~~~~aDvvi~a~---G--~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+.+.++++|+||.++ | .|.+++.++++.||+|+++|.++.-
T Consensus 107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaid 153 (183)
T d1l7da1 107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVE 153 (183)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGG
T ss_pred HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeec
Confidence 112356899999885 3 3567999999999999999998764
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.95 E-value=8.2e-10 Score=87.65 Aligned_cols=102 Identities=17% Similarity=0.145 Sum_probs=80.0
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|+++.+... ..+|++|+|.|+ |++|+.+++.++.+|++|+++..++++.+.+++.|++ +++ ..+.+
T Consensus 13 A~~al~~~~~-~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~t~ 91 (183)
T d1pqwa_ 13 AWHSLCEVGR-LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTD 91 (183)
T ss_dssp HHHHHHTTSC-CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTT
T ss_pred HHHHHHHHhC-CCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCccCHHHHHHHHhC
Confidence 4677655433 468999999996 8999999999999999999998888888888888875 322 22222
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++|++++|+|.+ .++ +.++.++++|+++++|..+
T Consensus 92 ~~g~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~G~~~ 127 (183)
T d1pqwa_ 92 GYGVDVVLNSLAGE-AIQ-RGVQILAPGGRFIELGKKD 127 (183)
T ss_dssp TCCEEEEEECCCTH-HHH-HHHHTEEEEEEEEECSCGG
T ss_pred CCCEEEEEecccch-HHH-HHHHHhcCCCEEEEEccCC
Confidence 3699999999974 454 5799999999999998653
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.93 E-value=7.8e-10 Score=88.19 Aligned_cols=101 Identities=15% Similarity=0.169 Sum_probs=80.4
Q ss_pred chhhhhhhhccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC------HHhhh---
Q 037949 49 SLPDGLMRATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT------REDVV--- 117 (243)
Q Consensus 49 ~~~~av~~~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~------~~~~~--- 117 (243)
..|+++.+..+ ..+|++|+|.|++ .+|+.+++.++..|++|+.+..++++.+.++..|++ +++ .+...
T Consensus 16 TA~~al~~~~~-v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~ 94 (182)
T d1v3va2 16 TAYFGLLEVCG-VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKA 94 (182)
T ss_dssp HHHHHHHTTTC-CCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHh
Confidence 35677765544 4689999999995 799999999999999999999999988888888875 222 12221
Q ss_pred --cCCcEEEEccCChhcccHHHHccCCCCeEEEEecC
Q 037949 118 --SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 118 --~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.++|+|++|+|. +.++ +.++.++++|+++.+|.
T Consensus 95 ~~~Gvd~v~D~vG~-~~~~-~~~~~l~~~G~~v~~G~ 129 (182)
T d1v3va2 95 SPDGYDCYFDNVGG-EFLN-TVLSQMKDFGKIAICGA 129 (182)
T ss_dssp CTTCEEEEEESSCH-HHHH-HHGGGEEEEEEEEECCC
T ss_pred hcCCCceeEEecCc-hhhh-hhhhhccCCCeEEeecc
Confidence 479999999985 4554 57999999999999985
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=98.93 E-value=3.9e-09 Score=86.01 Aligned_cols=86 Identities=21% Similarity=0.309 Sum_probs=73.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhc-CCcEEEEccCChhcccHHHHc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVS-EAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~-~aDvvi~a~G~~~~i~~~~l~ 139 (243)
.+.|++|+|.|+|.+|..+|+.|...|++|+++|.++.+...+...|.+.++.++.+. .+|+++.|. ....++.+..+
T Consensus 24 ~L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~~~~~~~~~~DI~iPcA-~~~~I~~~~a~ 102 (201)
T d1c1da1 24 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCA-MGGVITTEVAR 102 (201)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECS-CSCCBCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccCccccccccceeeeccc-ccccccHHHHh
Confidence 5899999999999999999999999999999999999988777778888888877764 799999985 44668888888
Q ss_pred cCCCCeEEEE
Q 037949 140 QMKNAAIVCN 149 (243)
Q Consensus 140 ~l~~g~~vvn 149 (243)
.++ +.++.
T Consensus 103 ~i~--ak~i~ 110 (201)
T d1c1da1 103 TLD--CSVVA 110 (201)
T ss_dssp HCC--CSEEC
T ss_pred hhh--hheee
Confidence 774 45553
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=98.89 E-value=3.4e-09 Score=83.75 Aligned_cols=102 Identities=16% Similarity=0.136 Sum_probs=79.6
Q ss_pred hhhhhhhhccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|+++.+... ..+|++|+|+|+| .+|+.+++.++..|++|++++.++.+.+.+++.|++ +++ +.+.+
T Consensus 16 A~~al~~~~~-l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~~~d~~~~v~~~t~ 94 (179)
T d1qora2 16 VYYLLRKTYE-IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITG 94 (179)
T ss_dssp HHHHHHTTSC-CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred HHHHHHHHhC-CCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEECCCCCHHHHHHHHhC
Confidence 4667655433 4689999999777 599999999999999999999999998888888975 332 22222
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|+++++.|.. .+. ..+..++++|+++..|...
T Consensus 95 g~g~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 130 (179)
T d1qora2 95 GKKVRVVYDSVGRD-TWE-RSLDCLQRRGLMVSFGNSS 130 (179)
T ss_dssp TCCEEEEEECSCGG-GHH-HHHHTEEEEEEEEECCCTT
T ss_pred CCCeEEEEeCccHH-HHH-HHHHHHhcCCeeeeccccc
Confidence 3589999998754 454 5789999999999888653
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.88 E-value=2e-09 Score=90.71 Aligned_cols=129 Identities=12% Similarity=0.196 Sum_probs=76.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEE-Ecc-CCh----hccc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFV-TTT-ENA----DIIM 134 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi-~a~-G~~----~~i~ 134 (243)
++||+++|+|++ +||+++|+.|...|++|+++|+++++++..... ..+...+..++. .|- ..+ .+++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~------~~~~~~~~~~~~~~~Dvt~~~~v~~~~~ 75 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAA------VLETAPDAEVLTTVADVSDEAQVEAYVT 75 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHHHCTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHhhCCCCeEEEEeccCCCHHHHHHHHH
Confidence 689999999998 899999999999999999999998876443220 000111222221 110 121 1121
Q ss_pred H--HHHccCCCCeEEEEecCCC--C---CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCC
Q 037949 135 V--RHMKQMKNAAIVCNIGHFD--N---EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPT 204 (243)
Q Consensus 135 ~--~~l~~l~~g~~vvnvg~~~--~---~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~ 204 (243)
. +.+. +.+.+|+|+|... . +++.+.+... +..++...++.... +++.| ..|+|||++|..
T Consensus 76 ~~~~~~G--~iDiLVnnAG~~~~~~~~~~~~~~~~~~~-------~~vNl~g~~~~~~~-~~~~m~~~~~G~Ii~isS~~ 145 (258)
T d1iy8a_ 76 ATTERFG--RIDGFFNNAGIEGKQNPTESFTAAEFDKV-------VSINLRGVFLGLEK-VLKIMREQGSGMVVNTASVG 145 (258)
T ss_dssp HHHHHHS--CCSEEEECCCCCCCCBCGGGSCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCCEEEEECCGG
T ss_pred HHHHHhC--CCCEEEECCcccccCCchhhhhhhHHHHH-------hhhhccchhhhhhh-hHhhhhhhcCCCCcccccHh
Confidence 1 2244 4588899998642 2 2455555431 23344333333333 56665 359999999965
Q ss_pred CC
Q 037949 205 GH 206 (243)
Q Consensus 205 g~ 206 (243)
+.
T Consensus 146 ~~ 147 (258)
T d1iy8a_ 146 GI 147 (258)
T ss_dssp GT
T ss_pred hc
Confidence 43
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.85 E-value=2.5e-09 Score=89.32 Aligned_cols=135 Identities=16% Similarity=0.153 Sum_probs=80.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEccCChhcccHHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTTTENADIIMVRHM 138 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a~G~~~~i~~~~l 138 (243)
.++||+++|+|++ +||+++|+.|...|++|+++|+++.+++...+..- +...+ .+. .....++ +.+
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----------~~~~~~~Dv-~d~~~v~-~~~ 71 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----------GIEPVCVDL-GDWEATE-RAL 71 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----------TCEEEECCT-TCHHHHH-HHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----------CCeEEEEeC-CCHHHHH-HHH
Confidence 5799999999988 89999999999999999999999887654433211 11111 111 1222232 234
Q ss_pred ccC-CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHH-hhh---cCCeecccCCCCCccc
Q 037949 139 KQM-KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGII-ILA---ERLLMNLGCPTGHPSF 209 (243)
Q Consensus 139 ~~l-~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~-ll~---~G~ivNl~s~~g~p~~ 209 (243)
+.+ +.+.+|+|+|... .+++.+.+... +..+.....+.... +++ +++ .|+|+|++|..++...
T Consensus 72 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~-------~~vnl~~~~~~~~~-~~~~~~~~~~~g~Ii~isS~~~~~~~ 143 (244)
T d1pr9a_ 72 GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRS-------FEVNLRAVIQVSQI-VARGLIARGVPGAIVNVSSQCSQRAV 143 (244)
T ss_dssp TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCCEEEEEECCGGGTSCC
T ss_pred HHhCCceEEEeccccccccchhhhhHHHHHHH-------HHHhhhhhhHHHHH-hhhHHHHhCCcceEeecccccccccc
Confidence 444 5578888888764 23455555431 22333322222233 565 553 4899999997654433
Q ss_pred cccchH
Q 037949 210 VMSCSF 215 (243)
Q Consensus 210 ~~~~~~ 215 (243)
-....|
T Consensus 144 ~~~~~Y 149 (244)
T d1pr9a_ 144 TNHSVY 149 (244)
T ss_dssp TTBHHH
T ss_pred cchhhh
Confidence 333333
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.85 E-value=6.1e-10 Score=93.46 Aligned_cols=127 Identities=15% Similarity=0.113 Sum_probs=76.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH--HH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV--RH 137 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~--~~ 137 (243)
.++||+++|+|++ +||+++|+.|...|++|+++|++++..+.+...+...+ .+|+- +......+++. +.
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-------~~Dv~-~~~~v~~~~~~~~~~ 73 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFF-------QVDLE-DERERVRFVEEAAYA 73 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEE-------ECCTT-CHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEE-------EEeCC-CHHHHHHHHHHHHHh
Confidence 3789999999987 99999999999999999999999876544433332211 11110 00000112211 22
Q ss_pred HccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCCC
Q 037949 138 MKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPTG 205 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~g 205 (243)
+. +.+.+|+|+|... .+++.+++... +..+....++.... +++.|. .|+|||++|..+
T Consensus 74 ~G--~iDiLVnnAG~~~~~~~~~~~~e~~~~~-------~~vNl~g~~~~~~~-~~p~m~~~~~G~Ii~isS~~~ 138 (248)
T d2d1ya1 74 LG--RVDVLVNNAAIAAPGSALTVRLPEWRRV-------LEVNLTAPMHLSAL-AAREMRKVGGGAIVNVASVQG 138 (248)
T ss_dssp HS--CCCEEEECCCCCCCBCTTTCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHTTTCEEEEEECCGGG
T ss_pred cC--CCCeEEEeCcCCCCCChhhCCHHHHHHH-------HHhhhhhHhhhhhh-hcccccccccccccccccccc
Confidence 44 4588888888763 23555555431 23344333333334 676663 389999999654
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=98.83 E-value=3.5e-09 Score=83.76 Aligned_cols=110 Identities=16% Similarity=0.138 Sum_probs=83.3
Q ss_pred hhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhh----h-----cCC
Q 037949 52 DGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDV----V-----SEA 120 (243)
Q Consensus 52 ~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~----~-----~~a 120 (243)
+++.+. ....+|++|+|.|+ |.+|..+++.++.+|++|+.+..++++.+.+...|++ +++.++. . .+.
T Consensus 13 ~~L~~~-g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~~~~~~~~gv 91 (167)
T d1tt7a2 13 HRLEQN-GLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQW 91 (167)
T ss_dssp HHHHHT-TCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCE
T ss_pred HHHHHh-cCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccchhchhhhcccCCCc
Confidence 444433 22346788999995 7999999999999999999999998888888888986 3443322 1 368
Q ss_pred cEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
|+++++.|.+. +. +.++.++++|+++.+|... .+++...+..
T Consensus 92 d~vid~vgg~~-~~-~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~ 136 (167)
T d1tt7a2 92 QGAVDPVGGKQ-LA-SLLSKIQYGGSVAVSGLTGGGEVPATVYPFIL 136 (167)
T ss_dssp EEEEESCCTHH-HH-HHHTTEEEEEEEEECCCSSCSCEEECSHHHHT
T ss_pred eEEEecCcHHH-HH-HHHHHhccCceEEEeeccCCCcccCCHHHHHH
Confidence 99999998765 43 5799999999999999664 3455555544
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.82 E-value=4e-09 Score=87.97 Aligned_cols=126 Identities=15% Similarity=0.112 Sum_probs=77.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEc-cCChhcccHHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTT-TENADIIMVRHM 138 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a-~G~~~~i~~~~l 138 (243)
.++||+++|+|++ +||+++|+.|...|++|+++++++.++....+..- +...+ .| ...+..++ +.+
T Consensus 2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----------~~~~~-~~Dv~~~~~v~-~~~ 69 (242)
T d1cyda_ 2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----------GIEPV-CVDLGDWDATE-KAL 69 (242)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----------TCEEE-ECCTTCHHHHH-HHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----------CCeEE-EEeCCCHHHHH-HHH
Confidence 4789999999988 89999999999999999999999887644433211 11111 11 12223333 344
Q ss_pred ccC-CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHH-hhh---cCCeecccCCCCC
Q 037949 139 KQM-KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGII-ILA---ERLLMNLGCPTGH 206 (243)
Q Consensus 139 ~~l-~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~-ll~---~G~ivNl~s~~g~ 206 (243)
+.+ +.+.+|+|+|... .+++.+.+... +..+.....+.... +++ ++. .|+|||++|..+.
T Consensus 70 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~-------~~vnl~~~~~~~~~-~~~~~~~~~~~g~ii~isS~~~~ 138 (242)
T d1cyda_ 70 GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRS-------FSVNLRSVFQVSQM-VARDMINRGVPGSIVNVSSMVAH 138 (242)
T ss_dssp TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCCEEEEEECCGGGT
T ss_pred HHcCCCeEEEECCccccchhHHHHHHHHHHHH-------HHHHhccchHHHHH-hchhhhhhcccCcccccchhhcc
Confidence 444 5678888988764 23555555431 22333322222223 554 342 3899999996543
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.80 E-value=4.4e-09 Score=87.96 Aligned_cols=126 Identities=15% Similarity=0.170 Sum_probs=76.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-CCcccCHHhhhcCCcEEEEc-cCCh----hcc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTE-GIPVLTREDVVSEAGLFVTT-TENA----DII 133 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G~~~~~~~~~~~~aDvvi~a-~G~~----~~i 133 (243)
.++||+++|+|++ +||+++|+.|...|++|+++|+++.+++...+. +-. + ..+.| ...+ .++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------~-~~~~~Dv~~~~~v~~~~ 71 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA----------A-RYVHLDVTQPAQWKAAV 71 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGG----------E-EEEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCc----------c-eEEEeecCCHHHHHHHH
Confidence 3789999999987 899999999999999999999999876543321 110 0 01111 0111 112
Q ss_pred cH--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCC
Q 037949 134 MV--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPT 204 (243)
Q Consensus 134 ~~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~ 204 (243)
+. +.+. +.+.+|+|+|... .+++.+.+... +..++...++..+. ++..| ..|+|||++|..
T Consensus 72 ~~~~~~~g--~idilinnAG~~~~~~~~~~~~~~~~~~-------~~vNl~~~~~~~~~-~~~~m~~~~~G~Ii~isS~~ 141 (244)
T d1nffa_ 72 DTAVTAFG--GLHVLVNNAGILNIGTIEDYALTEWQRI-------LDVNLTGVFLGIRA-VVKPMKEAGRGSIINISSIE 141 (244)
T ss_dssp HHHHHHHS--CCCEEEECCCCCCCBCTTTSCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCGG
T ss_pred HHHHHHhC--CCeEEEECCcccCCCchhhCCHHHHhHH-------hhcccchhhHHHHH-HHhHHHhcCcceEEeccccc
Confidence 11 1233 5588888888764 23555555431 22343333333333 56555 248999999976
Q ss_pred CCc
Q 037949 205 GHP 207 (243)
Q Consensus 205 g~p 207 (243)
|+-
T Consensus 142 ~~~ 144 (244)
T d1nffa_ 142 GLA 144 (244)
T ss_dssp GTS
T ss_pred ccc
Confidence 543
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.80 E-value=5.3e-09 Score=87.70 Aligned_cols=127 Identities=17% Similarity=0.216 Sum_probs=76.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEcc-CCh----hcc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTTT-ENA----DII 133 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a~-G~~----~~i 133 (243)
.++||+++|+|++ +||+++|+.|...|++|+++|++++++...... +.+.. +.++. +.|- ..+ .++
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~------l~~~~-g~~~~~~~~Dv~~~~~v~~~~ 74 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQK------LTEKY-GVETMAFRCDVSNYEEVKKLL 74 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHHHH-CCCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHHHh-CCcEEEEEccCCCHHHHHHHH
Confidence 4789999999988 899999999999999999999998876443210 00000 12222 1110 111 122
Q ss_pred cH--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCC
Q 037949 134 MV--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPT 204 (243)
Q Consensus 134 ~~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~ 204 (243)
+. +.+. +.+.+|+|+|... .+++.+.+... +..+....++.... +++.|. .|+|||++|..
T Consensus 75 ~~~~~~~g--~iDiLVnnAG~~~~~~~~~~~~e~~~~~-------~~vNl~~~~~~~~~-~~~~m~~~~~G~Ii~i~S~~ 144 (251)
T d1vl8a_ 75 EAVKEKFG--KLDTVVNAAGINRRHPAEEFPLDEFRQV-------IEVNLFGTYYVCRE-AFSLLRESDNPSIINIGSLT 144 (251)
T ss_dssp HHHHHHHS--CCCEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHTTCSSCEEEEECCGG
T ss_pred HHHHHHcC--CCCEEEECCCCCCCCChhhCCHHHHHHH-------HHhhhhhhhhhhhh-hhhcccccccccccccccch
Confidence 11 1244 5588888988764 23555555431 23344333333334 677673 38999999854
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.79 E-value=3.3e-09 Score=89.23 Aligned_cols=130 Identities=14% Similarity=0.145 Sum_probs=76.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-CCcccCHHhhhcCCcEEEEccCChhcccH--H
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTE-GIPVLTREDVVSEAGLFVTTTENADIIMV--R 136 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G~~~~~~~~~~~~aDvvi~a~G~~~~i~~--~ 136 (243)
.++||+++|+|++ +||+++|+.|...|++|+++|++++++....+. +..+. ...+|+-- -.....+++. +
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~Dv~~-~~~v~~~~~~~~~ 75 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAAR-----YQHLDVTI-EEDWQRVVAYARE 75 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEE-----EEECCTTC-HHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceE-----EEEcccCC-HHHHHHHHHHHHH
Confidence 3789999999998 899999999999999999999998876544332 21100 00111100 0001111211 2
Q ss_pred HHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPTGH 206 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~g~ 206 (243)
.+. +.+.+|+|+|... .+.+.+.+... +..+....++..+. +++.| ..|+|||++|..+.
T Consensus 76 ~~g--~iDilVnnAg~~~~~~~~~~~~~~~~~~-------~~vN~~~~~~~~~~-~~p~m~~~~~G~II~isS~~~~ 142 (254)
T d1hdca_ 76 EFG--SVDGLVNNAGISTGMFLETESVERFRKV-------VEINLTGVFIGMKT-VIPAMKDAGGGSIVNISSAAGL 142 (254)
T ss_dssp HHS--CCCEEEECCCCCCCSCGGGSCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCGGGT
T ss_pred HcC--CccEEEecCccccccccccccccccchh-------hhHHhhHHHHHHHH-HHHHHhhcCCCeecccccchhc
Confidence 244 5588888888764 23444544431 23333332333334 66655 24999999996544
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=98.79 E-value=4.2e-09 Score=84.46 Aligned_cols=111 Identities=15% Similarity=0.073 Sum_probs=76.2
Q ss_pred hhhhhhhccccccCcEEEEE--cCChHHHHHHHHHHhCCCEEEEEeCCch----hHHHHhhcCCc-ccCHH---------
Q 037949 51 PDGLMRATDITIAGKIAVDC--GHGDVGRGCAAALKAVGARVMGTEIDLI----CALQALTEGIP-VLTRE--------- 114 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlVi--G~G~IG~~~A~~l~~~Ga~V~v~d~~~~----r~~~a~~~G~~-~~~~~--------- 114 (243)
|+++.+... ..+|++|+|+ |.|++|+.+.+.++.+|++|+++-.++. +.....+.|++ +++.+
T Consensus 17 ~~~l~~~~~-~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~ 95 (189)
T d1gu7a2 17 YLMLTHYVK-LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGP 95 (189)
T ss_dssp HHHHHSSSC-CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHH
T ss_pred HHHHHHHhC-CCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHH
Confidence 455544322 4689999998 5679999999999999999887644432 23344567875 33221
Q ss_pred ---hhh----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 115 ---DVV----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 115 ---~~~----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
+.. .++|++++|+|.+. +. +.++.++++|+++.+|... .+++...+..
T Consensus 96 ~v~~~~~~~g~~vdvv~D~vg~~~-~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~ 153 (189)
T d1gu7a2 96 TIKEWIKQSGGEAKLALNCVGGKS-ST-GIARKLNNNGLMLTYGGMSFQPVTIPTSLYIF 153 (189)
T ss_dssp HHHHHHHHHTCCEEEEEESSCHHH-HH-HHHHTSCTTCEEEECCCCSSCCEEECHHHHHH
T ss_pred HHHHHHhhccCCceEEEECCCcch-hh-hhhhhhcCCcEEEEECCccCCCccCcHHHHHH
Confidence 111 25899999998654 43 5799999999999998543 3366665544
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.79 E-value=3e-09 Score=89.64 Aligned_cols=130 Identities=14% Similarity=0.128 Sum_probs=77.2
Q ss_pred ccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEcc-CCh----hc
Q 037949 60 ITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTTT-ENA----DI 132 (243)
Q Consensus 60 ~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a~-G~~----~~ 132 (243)
+.++||+++|+|++ +||+++|+.|...|++|+++|+++.+++..... +.+ .+..+. +.|- ..+ .+
T Consensus 4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~------~~~--~g~~~~~~~~Dv~~~~~v~~~ 75 (259)
T d2ae2a_ 4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQ------WRS--KGFKVEASVCDLSSRSERQEL 75 (259)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHH--TTCEEEEEECCTTCHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHh--cCCCceEEEeeCCCHHHHHHH
Confidence 35899999999998 899999999999999999999998876543321 000 011111 1110 111 22
Q ss_pred ccHHHHccC--CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCC
Q 037949 133 IMVRHMKQM--KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCP 203 (243)
Q Consensus 133 i~~~~l~~l--~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~ 203 (243)
++ +..+.. +.+.+|+|+|... .+++.+.+... +..+....++.... +++.|. .|+|||++|.
T Consensus 76 ~~-~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~-------~~vNl~~~~~~~~~-~~~~m~~~~~G~Ii~isS~ 146 (259)
T d2ae2a_ 76 MN-TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLI-------MSINFEAAYHLSVL-AHPFLKASERGNVVFISSV 146 (259)
T ss_dssp HH-HHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHTSSEEEEEECCG
T ss_pred HH-HHHHHhCCCceEEEECCceeccCccccCCHHHHHHH-------HhcccceeEEEEee-ccchhhhhccccccccccc
Confidence 22 122222 4578888888764 23455555431 22333322222233 666652 4899999996
Q ss_pred CCC
Q 037949 204 TGH 206 (243)
Q Consensus 204 ~g~ 206 (243)
.+.
T Consensus 147 ~~~ 149 (259)
T d2ae2a_ 147 SGA 149 (259)
T ss_dssp GGT
T ss_pred ccc
Confidence 543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.78 E-value=3.1e-09 Score=89.54 Aligned_cols=132 Identities=11% Similarity=0.083 Sum_probs=73.3
Q ss_pred ccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEE-Ec-cCCh----hc
Q 037949 60 ITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFV-TT-TENA----DI 132 (243)
Q Consensus 60 ~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi-~a-~G~~----~~ 132 (243)
+.++||+++|+|++ +||+++|+.|...|++|+++++++.++...... ..+ ...++.. .| ...+ .+
T Consensus 4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~------~~~--~~~~~~~~~~Dv~~~~~v~~~ 75 (259)
T d1xq1a_ 4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSK------WQK--KGFQVTGSVCDASLRPEREKL 75 (259)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHH--TTCCEEEEECCTTSHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHh--cCCceEEEeccCCCHHHHHHH
Confidence 35799999999988 899999999999999999999998876543321 000 0111111 11 0111 12
Q ss_pred ccHHHHccC--CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCC
Q 037949 133 IMVRHMKQM--KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCP 203 (243)
Q Consensus 133 i~~~~l~~l--~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~ 203 (243)
+. +..+.. +.+.+|+|+|... .+++.+++... +..+....++.... +++.|. .|+|||++|.
T Consensus 76 ~~-~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~-------~~vNl~g~~~~~~~-~~~~m~~~~~G~Iv~isS~ 146 (259)
T d1xq1a_ 76 MQ-TVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFH-------ISTNLESAYHLSQL-AHPLLKASGCGNIIFMSSI 146 (259)
T ss_dssp HH-HHHHHHTTCCSEEEEECCC------CCCCHHHHHHH-------HHHHHHHHHHHHHH-HHHHHHHHSSCEEEEEC--
T ss_pred HH-HHHHHhCCCcccccccccccCCCchhhCCHHHHHHH-------HHHHhhhheeeehh-hhhcccccccccccccccc
Confidence 21 112211 4578888888763 23555555431 22333332233334 677663 4899999997
Q ss_pred CCCcc
Q 037949 204 TGHPS 208 (243)
Q Consensus 204 ~g~p~ 208 (243)
.++-.
T Consensus 147 ~~~~~ 151 (259)
T d1xq1a_ 147 AGVVS 151 (259)
T ss_dssp -----
T ss_pred ccccc
Confidence 65433
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=98.77 E-value=1.6e-08 Score=79.01 Aligned_cols=89 Identities=11% Similarity=0.168 Sum_probs=73.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH------HHH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV------RHM 138 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~------~~l 138 (243)
+|.|||.|.+|..+|+.|...|.+|+++|+++.+.+.....+..+ .++.+.++++|+++.|..++..+.. ..+
T Consensus 2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~ 81 (161)
T d1vpda2 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII 81 (161)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence 599999999999999999999999999999999887777777753 4678888999999999877654322 235
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..++++.++++.+...
T Consensus 82 ~~~~~g~iiid~sT~~ 97 (161)
T d1vpda2 82 EGAKPGTVLIDMSSIA 97 (161)
T ss_dssp HHCCTTCEEEECSCCC
T ss_pred hccCCCCEEEECCCCC
Confidence 6678999999977653
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.77 E-value=1.2e-08 Score=81.20 Aligned_cols=102 Identities=16% Similarity=0.081 Sum_probs=80.4
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH----Hhhh-----cCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR----EDVV-----SEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~----~~~~-----~~aDvvi~a~G~ 129 (243)
..+|++|+|.|+ |.+|..+.+.++..|++|+.+..++.+.+.+...|++ +++. .+.. ++.|+|+|+.|.
T Consensus 29 ~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg 108 (176)
T d1xa0a2 29 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG 108 (176)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT
T ss_pred CCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceeeecchhHHHHHHHhhccCcCEEEEcCCc
Confidence 467999999995 6999999999999999999999998888888888886 3321 1211 378999999987
Q ss_pred hhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
.. ++ +.++.++++|+++.+|... .+++...+..
T Consensus 109 ~~-~~-~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~ 144 (176)
T d1xa0a2 109 RT-LA-TVLSRMRYGGAVAVSGLTGGAEVPTTVHPFIL 144 (176)
T ss_dssp TT-HH-HHHHTEEEEEEEEECSCCSSSCCCCCSHHHHH
T ss_pred hh-HH-HHHHHhCCCceEEEeecccCcccCCCHHHHHH
Confidence 64 43 5799999999999999653 4577776655
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.76 E-value=4.4e-09 Score=88.27 Aligned_cols=129 Identities=18% Similarity=0.229 Sum_probs=77.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcccCHHhhhcCCcEEEEccCChhcccH--HH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPVLTREDVVSEAGLFVTTTENADIIMV--RH 137 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~--~~ 137 (243)
++||+++|+|++ +||+++|+.|...|++|+++|+++.+++...+ .+.+.. .-.+|+- +......+++. +.
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~Dv~-~~~~~~~~~~~~~~~ 77 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSM-----FVRHDVS-SEADWTLVMAAVQRR 77 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEE-----EECCCTT-CHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeE-----EEEeecC-CHHHHHHHHHHHHHH
Confidence 789999999987 89999999999999999999999887654332 221110 0011110 00001111111 22
Q ss_pred HccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh--cCCeecccCCCCC
Q 037949 138 MKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA--ERLLMNLGCPTGH 206 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~--~G~ivNl~s~~g~ 206 (243)
+. +.+.+|+|+|... .+++.+++... +..+....++.... +++.|. .|+|||++|..++
T Consensus 78 ~g--~iDilVnnAG~~~~~~~~~~~~~~~~~~-------~~vNl~~~~~~~~~-~~~~m~~~~G~Iv~isS~~~~ 142 (253)
T d1hxha_ 78 LG--TLNVLVNNAGILLPGDMETGRLEDFSRL-------LKINTESVFIGCQQ-GIAAMKETGGSIINMASVSSW 142 (253)
T ss_dssp HC--SCCEEEECCCCCCCBCTTTCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHTTTCEEEEEECCGGGT
T ss_pred hC--CCCeEEecccccCCCCcccCCHHHHHHH-------HHHhhhHHHHHHHH-HHHHHHhcCCceecccchhhh
Confidence 44 4588888888763 23555555431 23344333333334 677774 4999999996543
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.76 E-value=1.8e-08 Score=78.61 Aligned_cols=88 Identities=15% Similarity=0.184 Sum_probs=70.9
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-c-ccCHHhhhcCCcEEEEccCCh---hcccHHHHcc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-P-VLTREDVVSEAGLFVTTTENA---DIIMVRHMKQ 140 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~-~~~~~~~~~~aDvvi~a~G~~---~~i~~~~l~~ 140 (243)
+++|||+|.+|..+|+.|+..|.+|+++|+++++.+.+.+.|. + ..+..+.++++|+||.|+... .+++ +..+.
T Consensus 2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp~~~~~~vl~-~l~~~ 80 (165)
T d2f1ka2 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPIQLILPTLE-KLIPH 80 (165)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSCHHHHHHHHH-HHGGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCcHhhhhhhhh-hhhhh
Confidence 5899999999999999999999999999999998888888775 2 334456778999999997432 3443 45677
Q ss_pred CCCCeEEEEecCCC
Q 037949 141 MKNAAIVCNIGHFD 154 (243)
Q Consensus 141 l~~g~~vvnvg~~~ 154 (243)
++++.+|++++...
T Consensus 81 l~~~~iv~~~~s~~ 94 (165)
T d2f1ka2 81 LSPTAIVTDVASVK 94 (165)
T ss_dssp SCTTCEEEECCSCC
T ss_pred cccccceeeccccc
Confidence 89999999987553
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.75 E-value=1.1e-09 Score=91.26 Aligned_cols=125 Identities=15% Similarity=0.096 Sum_probs=72.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhccc--HHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIM--VRH 137 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~--~~~ 137 (243)
.++||+++|+|++ +||+++|+.|...|++|+++++++.........-.++.+.++. ..+++ .+.
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v-------------~~~~~~~~~~ 70 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAV-------------DRAFTAVEEH 70 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHH-------------HHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceEEEEecCCHHHH-------------HHHHHHHHHh
Confidence 5799999999998 8999999999999999999999876532111111111221111 11111 122
Q ss_pred HccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCCCCcc
Q 037949 138 MKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPTGHPS 208 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~g~p~ 208 (243)
+. +.+.+|+|+|... .+.+.+.+... +..++....+.... +++.| ..|+|||++|..+.-.
T Consensus 71 ~g--~iDiLVnnAG~~~~~~~~~~~~e~~~~~-------~~vNl~~~~~~~~~-~~~~m~~~~~g~Iv~isS~~~~~~ 138 (237)
T d1uzma1 71 QG--PVEVLVSNAGLSADAFLMRMTEEKFEKV-------INANLTGAFRVAQR-ASRSMQRNKFGRMIFIGSVSGLWG 138 (237)
T ss_dssp HS--SCSEEEEECSCCC-----CCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHTTCEEEEEECCCCC---
T ss_pred cC--CceEEEeeecccccccHhhCCHHHHHHH-------HHhhhhhhhhhhhh-hhhcccccCCCceEEEcchhhccC
Confidence 44 4578888888753 23455555431 22333322222223 56555 2379999999775533
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.74 E-value=3.7e-09 Score=88.67 Aligned_cols=123 Identities=20% Similarity=0.227 Sum_probs=75.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEcc-CCh----hccc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTT-ENA----DIIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~-G~~----~~i~ 134 (243)
.++||+++|+|++ +||+++|+.|...|++|+++|++++++....+..-. + ..+.|- ..+ .+++
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~----------~-~~~~~Dvs~~~~v~~~~~ 71 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----------A-VFILCDVTQEDDVKTLVS 71 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT----------E-EEEECCTTSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCC----------C-eEEEccCCCHHHHHHHHH
Confidence 3789999999987 999999999999999999999998876544432211 0 011110 111 1121
Q ss_pred H--HHHccCCCCeEEEEecCCC-----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh--cCCeecccCCC
Q 037949 135 V--RHMKQMKNAAIVCNIGHFD-----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA--ERLLMNLGCPT 204 (243)
Q Consensus 135 ~--~~l~~l~~g~~vvnvg~~~-----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~--~G~ivNl~s~~ 204 (243)
. +.+. +.+.+|+|+|... .+++.+.+... +..+....++..+. +++.|. .|+|||++|..
T Consensus 72 ~~~~~~g--~iDilVnnAG~~~~~~~~~~~~~~~~~~~-------~~vNl~g~~~~~~~-~~p~m~~~~G~Ii~isS~~ 140 (250)
T d1ydea1 72 ETIRRFG--RLDCVVNNAGHHPPPQRPEETSAQGFRQL-------LELNLLGTYTLTKL-ALPYLRKSQGNVINISSLV 140 (250)
T ss_dssp HHHHHHS--CCCEEEECCCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEECCHH
T ss_pred HHHHhcC--CCCEEEecccccccccccccccHHHHHHH-------HHHhhhhHHHHHHH-hhHHHHhCCCCCccccccc
Confidence 1 2244 4588888988653 12444545431 23344333333334 677773 48999999954
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.73 E-value=3.4e-09 Score=88.86 Aligned_cols=128 Identities=14% Similarity=0.098 Sum_probs=75.6
Q ss_pred ccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEE-Ecc-CCh----hc
Q 037949 60 ITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFV-TTT-ENA----DI 132 (243)
Q Consensus 60 ~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi-~a~-G~~----~~ 132 (243)
+.+.||+++|+|++ +||+++|+.|...|++|+++|+++.+++..... +.+ .+.++.. .+- ..+ .+
T Consensus 6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~------l~~--~g~~~~~~~~Dvt~~~~v~~~ 77 (251)
T d2c07a1 6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDE------IKS--FGYESSGYAGDVSKKEEISEV 77 (251)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHH------HHT--TTCCEEEEECCTTCHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH------HHh--cCCcEEEEEccCCCHHHHHHH
Confidence 35789999999987 899999999999999999999998876543321 000 0112111 110 111 12
Q ss_pred ccH--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCC
Q 037949 133 IMV--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCP 203 (243)
Q Consensus 133 i~~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~ 203 (243)
++. +.+. +.+.+|+|+|... .+++.+++... +..+.....+.... +++.| ..|+|||++|.
T Consensus 78 ~~~~~~~~g--~iDilvnnag~~~~~~~~~~~~~~~~~~-------~~vNl~~~~~~~~~-~~~~m~~~~~G~IVnisS~ 147 (251)
T d2c07a1 78 INKILTEHK--NVDILVNNAGITRDNLFLRMKNDEWEDV-------LRTNLNSLFYITQP-ISKRMINNRYGRIINISSI 147 (251)
T ss_dssp HHHHHHHCS--CCCEEEECCCCCCCCCTTTCCHHHHHHH-------HHHHTTHHHHHHHH-HHHHHHHHTCEEEEEECCT
T ss_pred HHHHHHhcC--CceeeeeccccccccccccccHHHHhhh-------heeeehhhhhhhhh-cCcccccCCCeEEEEECCH
Confidence 211 1233 5578888888764 23454555431 22333332233333 56555 23999999996
Q ss_pred CC
Q 037949 204 TG 205 (243)
Q Consensus 204 ~g 205 (243)
.|
T Consensus 148 ~~ 149 (251)
T d2c07a1 148 VG 149 (251)
T ss_dssp HH
T ss_pred Hh
Confidence 53
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.73 E-value=7.3e-09 Score=86.57 Aligned_cols=128 Identities=16% Similarity=0.150 Sum_probs=74.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh--hcCCcccCHHhhhcCCcEEEEccCChhcccH--H
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL--TEGIPVLTREDVVSEAGLFVTTTENADIIMV--R 136 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~--~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~--~ 136 (243)
++||+++|+|++ +||+++|+.|...|++|+++|+++....... ..|.++. .-.+|+- +-.....+++. +
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~-----~~~~Dvs-~~~~v~~~~~~~~~ 76 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVL-----TVKCDVS-QPGDVEAFGKQVIS 76 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEE-----EEECCTT-CHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEE-----EEEeeCC-CHHHHHHHHHHHHH
Confidence 689999999988 8999999999999999999999875432211 2222110 0011110 00000111211 2
Q ss_pred HHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPTG 205 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~g 205 (243)
.+. +.+.+|+|+|... .+++.+.+... +..+.....+.... +++.|. .|+|||++|..+
T Consensus 77 ~~G--~iDilVnnAG~~~~~~~~~~~~e~~~~~-------~~vNl~~~~~~~~~-~~~~m~~~~~G~Iv~isS~~~ 142 (247)
T d2ew8a1 77 TFG--RCDILVNNAGIYPLIPFDELTFEQWKKT-------FEINVDSGFLMAKA-FVPGMKRNGWGRIINLTSTTY 142 (247)
T ss_dssp HHS--CCCEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCGGG
T ss_pred HcC--CCCEEEECCCCCCCCChHhCCHHHhhhh-------heeehhhhhHHHHH-HHhHHHhcCCCCccccccchh
Confidence 244 5588888988764 23555555431 23344333333334 666662 389999999654
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.73 E-value=6.4e-09 Score=87.43 Aligned_cols=128 Identities=16% Similarity=0.196 Sum_probs=74.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcCCcccCHHhhhcCCcEEEE-c-cCCh----hcc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEGIPVLTREDVVSEAGLFVT-T-TENA----DII 133 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~~~~~~~~~~~aDvvi~-a-~G~~----~~i 133 (243)
++||+++|+|++ +||+++|+.|...|++|+++++++.. ++..... +.+ ..+.++.+. | ...+ .++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~------~~~-~~g~~~~~~~~Dv~~~~~v~~~~ 74 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAG------LAA-QHGVKVLYDGADLSKGEAVRGLV 74 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHH------HHH-HHTSCEEEECCCTTSHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH------HHH-hcCCcEEEEECCCCCHHHHHHHH
Confidence 689999999988 89999999999999999999997543 3222110 000 011222211 1 0111 112
Q ss_pred cH--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCC
Q 037949 134 MV--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPT 204 (243)
Q Consensus 134 ~~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~ 204 (243)
+. +.+. +.+.+|+|+|... .+++.+.+... +..+.....+.... +++.|. .|+|||++|..
T Consensus 75 ~~~~~~~G--~iDiLVnnAG~~~~~~~~~~~~~~~~~~-------~~vNl~g~~~~~~~-~~~~m~~~~~G~Iv~isS~~ 144 (260)
T d1x1ta1 75 DNAVRQMG--RIDILVNNAGIQHTALIEDFPTEKWDAI-------LALNLSAVFHGTAA-ALPHMKKQGFGRIINIASAH 144 (260)
T ss_dssp HHHHHHHS--CCSEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCGG
T ss_pred HHHHHHhC--CCcEEEeecccccCCchhhhhHHhhhhh-------hhccccccccccch-hhhhHhhcCCceEeeccccc
Confidence 11 2244 4588899998764 23555555431 23344333333334 676663 48999999965
Q ss_pred CC
Q 037949 205 GH 206 (243)
Q Consensus 205 g~ 206 (243)
|+
T Consensus 145 ~~ 146 (260)
T d1x1ta1 145 GL 146 (260)
T ss_dssp GT
T ss_pred ce
Confidence 43
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.72 E-value=2.8e-09 Score=89.02 Aligned_cols=125 Identities=20% Similarity=0.241 Sum_probs=75.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcccCHHhhhcCCcEEEEccC---ChhcccHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPVLTREDVVSEAGLFVTTTE---NADIIMVR 136 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~~~~~~~~~~aDvvi~a~G---~~~~i~~~ 136 (243)
++||+++|+|++ +||+++|+.|...|++|+++|+++.+++...+ .+.+.. -+..+.+- ...+++ +
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~---------~~~~Dv~~~~~v~~~~~-~ 71 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK---------GLMLNVTDPASIESVLE-K 71 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEE---------EEECCTTCHHHHHHHHH-H
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCc---------EEEEEecCHHHhhhhhh-h
Confidence 689999999988 89999999999999999999999887644332 111100 00111110 112222 1
Q ss_pred HHccC-CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCC
Q 037949 137 HMKQM-KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPT 204 (243)
Q Consensus 137 ~l~~l-~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~ 204 (243)
..+.. +.+.+|+|+|... .+++.+.+... +..++...++..+. +++.|. .|+|||++|..
T Consensus 72 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~-------~~vNl~~~~~~~~~-~~~~m~~~~~G~II~isS~~ 139 (243)
T d1q7ba_ 72 IRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDI-------IETNLSSVFRLSKA-VMRAMMKKRHGRIITIGSVV 139 (243)
T ss_dssp HHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCHH
T ss_pred hhcccCCcceehhhhhhccccccccccccccccc-------cceeechhhhhHHH-HHHHHHHcCCCEeeeecchh
Confidence 22222 5688888888764 23455555431 23344333333334 676662 48999999954
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.70 E-value=3.9e-09 Score=88.91 Aligned_cols=130 Identities=13% Similarity=0.119 Sum_probs=77.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEcc-CCh----hccc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTTT-ENA----DIIM 134 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a~-G~~----~~i~ 134 (243)
++||+++|+|++ +||+++|+.|...|++|+++|+++++++...+. +.+ .+.++. +.|- .++ .+++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~------~~~--~g~~~~~~~~Dv~~~~~v~~~~~ 74 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEAS------VRE--KGVEARSYVCDVTSEEAVIGTVD 74 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHT--TTSCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHh--cCCcEEEEEccCCCHHHHHHHHH
Confidence 689999999988 899999999999999999999998876543321 000 011222 1110 111 2222
Q ss_pred H--HHHccCCCCeEEEEecCCC-----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCC
Q 037949 135 V--RHMKQMKNAAIVCNIGHFD-----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPT 204 (243)
Q Consensus 135 ~--~~l~~l~~g~~vvnvg~~~-----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~ 204 (243)
. +.+. +.+.+|+|+|... .+++.+.+... +..+....++.... +++.| ..|+|||++|..
T Consensus 75 ~~~~~~g--~iDilVnnaG~~~~~~~~~~~~~~~~~~~-------~~vnl~~~~~~~~~-~~~~m~~~~~G~II~isS~~ 144 (260)
T d1zema1 75 SVVRDFG--KIDFLFNNAGYQGAFAPVQDYPSDDFARV-------LTINVTGAFHVLKA-VSRQMITQNYGRIVNTASMA 144 (260)
T ss_dssp HHHHHHS--CCCEEEECCCCCCCCBCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCHH
T ss_pred HHHHHhC--CCCeehhhhccccccCccccccHHHHHhh-------ccccccccccchhh-HHhhhhhhcCCCCCeeechh
Confidence 1 1234 5588888888652 23455555431 22333333333333 56655 349999999953
Q ss_pred ---CCccc
Q 037949 205 ---GHPSF 209 (243)
Q Consensus 205 ---g~p~~ 209 (243)
+.|..
T Consensus 145 ~~~~~~~~ 152 (260)
T d1zema1 145 GVKGPPNM 152 (260)
T ss_dssp HHSCCTTB
T ss_pred hccCCcch
Confidence 45544
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.68 E-value=1.3e-08 Score=85.20 Aligned_cols=124 Identities=19% Similarity=0.235 Sum_probs=75.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-CCcccCHHhhhcCCcEE-EEc-cCCh----hcc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTE-GIPVLTREDVVSEAGLF-VTT-TENA----DII 133 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G~~~~~~~~~~~~aDvv-i~a-~G~~----~~i 133 (243)
++||+++|+|++ +||+++|+.|...|++|+++++++++++...+. +. ..++. +.| ...+ .++
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~ 73 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT----------PDQIQFFQHDSSDEDGWTKLF 73 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----------TTTEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC----------CCcEEEEEccCCCHHHHHHHH
Confidence 789999999987 899999999999999999999998876544321 10 11111 111 0111 112
Q ss_pred cH--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh-c---CCeecccCC
Q 037949 134 MV--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA-E---RLLMNLGCP 203 (243)
Q Consensus 134 ~~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~-~---G~ivNl~s~ 203 (243)
+. +.+. +.+.+|+|+|... .+++.+.+... +..+....++.... +++.|. + |+|||++|.
T Consensus 74 ~~~~~~~G--~iDiLVnnAg~~~~~~~~~~~~~~~~~~-------~~vnl~g~~~~~~~-~~~~m~~~~~gg~Ii~isS~ 143 (251)
T d1zk4a1 74 DATEKAFG--PVSTLVNNAGIAVNKSVEETTTAEWRKL-------LAVNLDGVFFGTRL-GIQRMKNKGLGASIINMSSI 143 (251)
T ss_dssp HHHHHHHS--SCCEEEECCCCCCCCCTTTCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHTTSSSCEEEEEECCG
T ss_pred HHHHHHhC--CceEEEeccccccccchhcccccchhhh-------ccccccccchhHHH-HHHHHHhcCCCCceEeeecc
Confidence 11 2344 4588888888763 23555555431 22344333333334 676663 2 489999996
Q ss_pred CC
Q 037949 204 TG 205 (243)
Q Consensus 204 ~g 205 (243)
.|
T Consensus 144 ~~ 145 (251)
T d1zk4a1 144 EG 145 (251)
T ss_dssp GG
T ss_pred ce
Confidence 54
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.68 E-value=9.1e-09 Score=86.42 Aligned_cols=130 Identities=15% Similarity=0.221 Sum_probs=75.6
Q ss_pred cccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEcc-CCh----h
Q 037949 59 DITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTTT-ENA----D 131 (243)
Q Consensus 59 ~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a~-G~~----~ 131 (243)
++.++||+++|+|++ +||+++|+.|...|++|+++++++++++...+. +.+ .+.++. +.|- ..+ .
T Consensus 6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~------l~~--~g~~~~~~~~Dvs~~~~~~~ 77 (255)
T d1fmca_ 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDE------IQQ--LGGQAFACRCDITSEQELSA 77 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHH------HHH--TTCCEEEEECCTTCHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHH--cCCcEEEEEccCCCHHHHHH
Confidence 345799999999988 899999999999999999999998876443321 000 011221 1110 111 1
Q ss_pred cccH--HHHccCCCCeEEEEecCCC-C--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCC
Q 037949 132 IIMV--RHMKQMKNAAIVCNIGHFD-N--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCP 203 (243)
Q Consensus 132 ~i~~--~~l~~l~~g~~vvnvg~~~-~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~ 203 (243)
+++. +.+. +.+.+|+|+|... . +++.+.+... +..+....++.... +++.|. .|+|||++|.
T Consensus 78 ~~~~~~~~~g--~iDilvnnAG~~~~~~~e~~~e~~~~~-------~~vNl~~~~~~~~~-~~~~m~~~~~g~Ii~isS~ 147 (255)
T d1fmca_ 78 LADFAISKLG--KVDILVNNAGGGGPKPFDMPMADFRRA-------YELNVFSFFHLSQL-VAPEMEKNGGGVILTITSM 147 (255)
T ss_dssp HHHHHHHHHS--SCCEEEECCCCCCCCCTTCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCG
T ss_pred HHHHHHHHcC--CCCEeeeCCcCCCCCcccCCHHHHHHH-------HHHHHHHhhhhHHH-HHhhhcccccccccccccc
Confidence 1111 2244 4588888888764 2 2344444331 23333332222233 565552 4789999996
Q ss_pred CCC
Q 037949 204 TGH 206 (243)
Q Consensus 204 ~g~ 206 (243)
.+.
T Consensus 148 ~~~ 150 (255)
T d1fmca_ 148 AAE 150 (255)
T ss_dssp GGT
T ss_pred chh
Confidence 543
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.68 E-value=9.5e-09 Score=86.24 Aligned_cols=131 Identities=20% Similarity=0.211 Sum_probs=76.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcccCHHhhhcCCcEEEEccCChhcccH--HH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPVLTREDVVSEAGLFVTTTENADIIMV--RH 137 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~--~~ 137 (243)
++||+++|+|++ +||+++|+.|...|++|+++|++++++....+ .|.++.. -.+|+- +-.....+++. +.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~-----~~~Dvt-~~~~v~~~~~~~~~~ 76 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACA-----IALDVT-DQASIDRCVAELLDR 76 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEE-----EECCTT-CHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEE-----EEeeCC-CHHHHHHHHHHHHHH
Confidence 689999999987 99999999999999999999999887654332 2221100 011110 00000111211 12
Q ss_pred HccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHH-hhh---cCCeecccCCCCCcc
Q 037949 138 MKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGII-ILA---ERLLMNLGCPTGHPS 208 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~-ll~---~G~ivNl~s~~g~p~ 208 (243)
+. +.+.+|+|+|... .+++.+.+... +..++....+.... ++. ++. .|+|||++|..+.-.
T Consensus 77 ~g--~iDilVnnAg~~~~~~~~~~~~~~~~~~-------~~vNl~g~~~~~~~-~~~~~~~~~~~g~Iv~isS~~~~~~ 145 (256)
T d1k2wa_ 77 WG--SIDILVNNAALFDLAPIVEITRESYDRL-------FAINVSGTLFMMQA-VARAMIAGGRGGKIINMASQAGRRG 145 (256)
T ss_dssp HS--CCCEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred hC--CccEEEeecccccccccccCCHHHHHhh-------hceeeeccccchhh-ccchhHHhccCCccccccchhhccc
Confidence 33 5688899988764 23455555431 22333322222223 454 453 389999999664433
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=1.4e-08 Score=84.88 Aligned_cols=141 Identities=12% Similarity=0.152 Sum_probs=79.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEE-Ecc-CCh----hcc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFV-TTT-ENA----DII 133 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi-~a~-G~~----~~i 133 (243)
.+.||+++|+|++ +||+.+|..|...|++|+++|+++++++..... ..+ .+.++.+ .|. ..+ ..+
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~------~~~--~~~~~~~~~~Dvs~~~~v~~~~ 75 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAK------CKG--LGAKVHTFVVDCSNREDIYSSA 75 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHH--TTCCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHh--cCCcEEEEEeeCCCHHHHHHHH
Confidence 5799999999998 899999999999999999999999876443321 000 1112211 121 111 122
Q ss_pred cHHHHccC-CCCeEEEEecCCC-CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh-h--cCCeecccCCCCCcc
Q 037949 134 MVRHMKQM-KNAAIVCNIGHFD-NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL-A--ERLLMNLGCPTGHPS 208 (243)
Q Consensus 134 ~~~~l~~l-~~g~~vvnvg~~~-~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll-~--~G~ivNl~s~~g~p~ 208 (243)
+ ...+.. +.+.+++|+|... ..+.......|. ..++.++....+.... +++.| . .|+|||++|..|...
T Consensus 76 ~-~i~~~~g~idilinnag~~~~~~~~~~~~~~~~----~~~~vN~~g~~~l~~~-~lp~m~~~~~G~Iv~isS~~~~~~ 149 (244)
T d1yb1a_ 76 K-KVKAEIGDVSILVNNAGVVYTSDLFATQDPQIE----KTFEVNVLAHFWTTKA-FLPAMTKNNHGHIVTVASAAGHVS 149 (244)
T ss_dssp H-HHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHH----HHHHHHTHHHHHHHHH-HHHHHHHTTCEEEEEECCCC-CCC
T ss_pred H-HHHHHcCCCceeEeeccccccccccccchhHHH----hhcceeeeccHHHHHH-HhhhHHhcCCceEEEeecchhcCC
Confidence 2 112222 5678888888764 222222222210 1123343332232233 66666 3 478999999887766
Q ss_pred ccccchH
Q 037949 209 FVMSCSF 215 (243)
Q Consensus 209 ~~~~~~~ 215 (243)
.-....|
T Consensus 150 ~~~~~~Y 156 (244)
T d1yb1a_ 150 VPFLLAY 156 (244)
T ss_dssp HHHHHHH
T ss_pred CCCcHHH
Confidence 5544444
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.65 E-value=1.8e-08 Score=84.06 Aligned_cols=133 Identities=14% Similarity=0.165 Sum_probs=75.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-CCcccCHHhhhcCCcEEEEccCChhcccHHHHc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTE-GIPVLTREDVVSEAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~ 139 (243)
++||+++|+|++ +||+++|+.|...|++|+++|+++.+++...+. +.... -+| . -....++. .+.
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~-------~~d----~-~~~~~~~~-~~~ 70 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTR-------VLD----V-TKKKQIDQ-FAN 70 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEE-------ECC----T-TCHHHHHH-HHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCcee-------eee----c-cccccccc-ccc
Confidence 789999999988 999999999999999999999998776433221 11100 011 1 01122221 111
Q ss_pred c-CCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCCC-Ccccc
Q 037949 140 Q-MKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPTG-HPSFV 210 (243)
Q Consensus 140 ~-l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~g-~p~~~ 210 (243)
. -+.+.+|+|+|... .+++.+.+... +..+.....+.... +++.| ..|+|+|++|..+ .+...
T Consensus 71 ~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~-------~~vn~~~~~~~~~~-~~~~~~~~~~g~Ii~isS~~~~~~~~~ 142 (245)
T d2ag5a1 71 EVERLDVLFNVAGFVHHGTVLDCEEKDWDFS-------MNLNVRSMYLMIKA-FLPKMLAQKSGNIINMSSVASSVKGVV 142 (245)
T ss_dssp HCSCCSEEEECCCCCCCBCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCSBTTTBCCT
T ss_pred ccccceeEEecccccCCCChhhCCHHHHHHH-------HHHhhccchhHHHh-hCcccccCCCceeeeeechhhccCCcc
Confidence 1 14577777777653 23455555431 22233222222223 55544 3489999998755 34433
Q ss_pred ccchH
Q 037949 211 MSCSF 215 (243)
Q Consensus 211 ~~~~~ 215 (243)
....|
T Consensus 143 ~~~~Y 147 (245)
T d2ag5a1 143 NRCVY 147 (245)
T ss_dssp TBHHH
T ss_pred chhHH
Confidence 33333
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.64 E-value=1.9e-09 Score=93.03 Aligned_cols=140 Identities=13% Similarity=0.141 Sum_probs=79.0
Q ss_pred ccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-CH-Hhh-hcCCcEEEEccC---Chhc
Q 037949 60 ITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-TR-EDV-VSEAGLFVTTTE---NADI 132 (243)
Q Consensus 60 ~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~-~~~-~~~aDvvi~a~G---~~~~ 132 (243)
+.++||+++|+|++ +||+++|+.|...|++|++.|++......+. ..... .. ++. .....+..+.+- ....
T Consensus 3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 80 (302)
T d1gz6a_ 3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGK--GSSAADKVVEEIRRRGGKAVANYDSVEAGEKL 80 (302)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBC--CSHHHHHHHHHHHHTTCEEEEECCCGGGHHHH
T ss_pred cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhh--hHHHHHHHHHHHhhcccccccccchHHHHHHH
Confidence 35789999999999 8999999999999999999998764321000 00000 00 011 012222222211 1222
Q ss_pred ccHHHHccC-CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCC
Q 037949 133 IMVRHMKQM-KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPT 204 (243)
Q Consensus 133 i~~~~l~~l-~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~ 204 (243)
++ ..++.. +.+.+|+|+|+.. .+++.+.+... +..+....++..+. ++..|. .|+|||++|..
T Consensus 81 v~-~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~-------~~vNl~g~~~~~~~-~~p~m~~~~~G~IV~isS~~ 151 (302)
T d1gz6a_ 81 VK-TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDII-------QRVHLRGSFQVTRA-AWDHMKKQNYGRIIMTASAS 151 (302)
T ss_dssp HH-HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHHHHHHHHHHH-HHHHHHHHTCEEEEEECCHH
T ss_pred HH-HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhh-------hceeehhhHHHHHH-hHHHHHhCCCcEEEEeCChh
Confidence 32 222222 5689999999764 23555555431 23344333333334 676662 38999999965
Q ss_pred ---CCcccc
Q 037949 205 ---GHPSFV 210 (243)
Q Consensus 205 ---g~p~~~ 210 (243)
|.|...
T Consensus 152 ~~~~~~~~~ 160 (302)
T d1gz6a_ 152 GIYGNFGQA 160 (302)
T ss_dssp HHHCCTTCH
T ss_pred hcCCCCCcH
Confidence 445443
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.63 E-value=1.3e-07 Score=73.94 Aligned_cols=94 Identities=18% Similarity=0.283 Sum_probs=71.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHH-HHhhcCCcccC---HHhhhcCCcEEEEccCChh-ccc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICAL-QALTEGIPVLT---REDVVSEAGLFVTTTENAD-IIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~-~a~~~G~~~~~---~~~~~~~aDvvi~a~G~~~-~i~ 134 (243)
.+.+++++|+|+|.+|..+++.|...|+ +++++.++..+.. .+...|..+.+ +.+.+..+|+||.||+.+. +++
T Consensus 21 ~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~Divi~atss~~~ii~ 100 (159)
T d1gpja2 21 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIH 100 (159)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBC
T ss_pred CcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccCCEEEEecCCCCcccc
Confidence 4789999999999999999999999999 7999999977753 34445655444 4556779999999998764 566
Q ss_pred HHHHccC------CCCeEEEEecCCC
Q 037949 135 VRHMKQM------KNAAIVCNIGHFD 154 (243)
Q Consensus 135 ~~~l~~l------~~g~~vvnvg~~~ 154 (243)
.+.++.. ++.-+++..|.+.
T Consensus 101 ~~~i~~~~~~r~~~~~~~iiDlavPr 126 (159)
T d1gpja2 101 VDDVREALRKRDRRSPILIIDIANPR 126 (159)
T ss_dssp HHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred HhhhHHHHHhcccCCCeEEEeecCCC
Confidence 6555322 2345888988764
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=5.2e-08 Score=81.68 Aligned_cols=129 Identities=12% Similarity=0.106 Sum_probs=75.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEc-cCCh----hcc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTT-TENA----DII 133 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a-~G~~----~~i 133 (243)
.++||+|+|+|++ +||+++|+.|...|++|+++++++.+++...+. +.+.-...+++ +.| ...+ .++
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~------l~~~~~~~~~~~~~~Dls~~~~v~~~v 80 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAE------CKSAGYPGTLIPYRCDLSNEEDILSMF 80 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHHTTCSSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHhcCCCceEEEEEccCCCHHHHHHHH
Confidence 3789999999998 999999999999999999999998876543321 00000012222 122 1121 122
Q ss_pred cH--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh-h----cCCeecccC
Q 037949 134 MV--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL-A----ERLLMNLGC 202 (243)
Q Consensus 134 ~~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll-~----~G~ivNl~s 202 (243)
+. +.+. +.+.+|+|+|... .+++.+.+... +..+....++.... ++..+ . .|+|+|++|
T Consensus 81 ~~~~~~~g--~iD~lVnnAg~~~~~~~~~~~~~~~~~~-------~~~nl~~~~~~~~~-~~~~~~~~~~~~g~Ii~isS 150 (257)
T d1xg5a_ 81 SAIRSQHS--GVDICINNAGLARPDTLLSGSTSGWKDM-------FNVNVLALSICTRE-AYQSMKERNVDDGHIININS 150 (257)
T ss_dssp HHHHHHHC--CCSEEEECCCCCCCCCTTTCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHTTCCSCEEEEECC
T ss_pred HHHHHhcC--CCCEEEecccccCCCccccccHHHHHhh-------hhhhhhHHHHHHHH-HHHHHHHhccCCCceEEEec
Confidence 11 1244 4588888888753 23455555431 22333332333223 55443 2 489999999
Q ss_pred CCC
Q 037949 203 PTG 205 (243)
Q Consensus 203 ~~g 205 (243)
.+|
T Consensus 151 ~~~ 153 (257)
T d1xg5a_ 151 MSG 153 (257)
T ss_dssp GGG
T ss_pred hHh
Confidence 664
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=98.61 E-value=4e-08 Score=72.24 Aligned_cols=90 Identities=19% Similarity=0.291 Sum_probs=64.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh--hcCCccc--C-HHhhhcCCcEEEEccCChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL--TEGIPVL--T-REDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~--~~G~~~~--~-~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
.++||+|+|+|+|.+|..-++.|...||+|++++.......... ..+.+.. . ..+.+.++++|+.|++.+. ++.
T Consensus 9 ~l~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~-~n~ 87 (113)
T d1pjqa1 9 QLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDT-VNQ 87 (113)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHH-HHH
T ss_pred EeCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecCCCHH-HHH
Confidence 47899999999999999999999999999999977655432222 2223221 1 1334678999999987765 444
Q ss_pred HHHccCCCCeEEEEec
Q 037949 136 RHMKQMKNAAIVCNIG 151 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg 151 (243)
+....+++.++.+|+.
T Consensus 88 ~i~~~a~~~~ilVNv~ 103 (113)
T d1pjqa1 88 RVSDAAESRRIFCNVV 103 (113)
T ss_dssp HHHHHHHHTTCEEEET
T ss_pred HHHHHHHHcCCEEEeC
Confidence 5566667778888754
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=98.59 E-value=8.7e-08 Score=76.19 Aligned_cols=101 Identities=18% Similarity=0.146 Sum_probs=77.0
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHh-----hh--cCCcEEEEccCChhc
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRED-----VV--SEAGLFVTTTENADI 132 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~-----~~--~~aDvvi~a~G~~~~ 132 (243)
..+++|+|.|+ |++|...++.++.+|++|+++..++++.+.+...|++ +++.++ .+ ...|.+++++|.+.
T Consensus 30 ~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~vi~~~~~~~~~~l~~~~~~~vvD~Vgg~~- 108 (177)
T d1o89a2 30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKV- 108 (177)
T ss_dssp GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEEEEGGGSSSCCSSCCCCEEEEEESSCHHH-
T ss_pred CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccccccccHHHHHHHHhhcCCeeEEEcchHH-
Confidence 45668999886 6999999999999999999999999988778888886 343322 11 23689999998754
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
+. +.++.++++|+++++|... .+++...+..
T Consensus 109 ~~-~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~ 142 (177)
T d1o89a2 109 LA-KVLAQMNYGGCVAACGLAGGFTLPTTVMPFIL 142 (177)
T ss_dssp HH-HHHHTEEEEEEEEECCCTTCSCCCCCSHHHHH
T ss_pred HH-HHHHHhccccceEeecccCCccccccHHHHHH
Confidence 43 5799999999999998653 3355555544
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.58 E-value=3.4e-08 Score=83.19 Aligned_cols=44 Identities=25% Similarity=0.304 Sum_probs=39.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL 104 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~ 104 (243)
.++||+++|+|++ +||+++|+.|...|++|+++++++++++...
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~ 55 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 55 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 4899999999998 8999999999999999999999998875543
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.58 E-value=1.7e-07 Score=73.05 Aligned_cols=90 Identities=13% Similarity=0.127 Sum_probs=73.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH------HH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV------RH 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~------~~ 137 (243)
++|.|||.|.+|..+|+.|...|.+|.++|+++.+.+.....+.. ..++.+.+..+|+++.|......... ..
T Consensus 2 ~kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~ 81 (162)
T d3cuma2 2 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 81 (162)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred CEEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence 579999999999999999999999999999999987777777764 45678888999999999876544321 13
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
...++++.++++.+-..
T Consensus 82 ~~~l~~g~iiid~st~~ 98 (162)
T d3cuma2 82 LAHIAPGTLVLECSTIA 98 (162)
T ss_dssp HHHSCTTCEEEECSCCC
T ss_pred cccCCCCCEEEECCCCC
Confidence 45678899999977654
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.57 E-value=4e-08 Score=78.44 Aligned_cols=101 Identities=16% Similarity=0.167 Sum_probs=70.1
Q ss_pred hhhhhhhhccccccC--cEEEEEcC-ChHHHHHHHHHHhCCCE-EEEEeCCchhHH-HHhhcCCc-ccC-----HHhhh-
Q 037949 50 LPDGLMRATDITIAG--KIAVDCGH-GDVGRGCAAALKAVGAR-VMGTEIDLICAL-QALTEGIP-VLT-----REDVV- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g--~~vlViG~-G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~-~a~~~G~~-~~~-----~~~~~- 117 (243)
.|+++..... ..+| ++|+|.|+ |+||+.+++.++.+|++ |+++..++++.. .+...|++ +++ ..+.+
T Consensus 16 A~~~l~~~~~-~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~~~ 94 (187)
T d1vj1a2 16 SLIGVQEKGH-ISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLR 94 (187)
T ss_dssp HHHHHHHHSC-CCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHHHH
T ss_pred HHHHHHHHhC-CCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchhHHHHHH
Confidence 4566655433 2344 89999995 89999999999999995 555666655543 34457875 322 22222
Q ss_pred ----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 ----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+++|++++++|.. .++ ..++.++++|+++.+|..
T Consensus 95 ~~~~~GvDvv~D~vGg~-~~~-~~~~~l~~~G~iv~~G~~ 132 (187)
T d1vj1a2 95 EACPGGVDVYFDNVGGD-ISN-TVISQMNENSHIILCGQI 132 (187)
T ss_dssp HHCTTCEEEEEESSCHH-HHH-HHHTTEEEEEEEEEC---
T ss_pred HHhccCceEEEecCCch-hHH-HHhhhccccccEEEeccc
Confidence 3699999999864 454 579999999999999863
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.56 E-value=4.8e-08 Score=81.67 Aligned_cols=41 Identities=34% Similarity=0.473 Sum_probs=37.3
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQA 103 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a 103 (243)
.||+++|+|++ +||+++|+.|...|++|+++|++++++...
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~ 43 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQC 43 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 69999999987 899999999999999999999998876543
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.55 E-value=2e-08 Score=83.11 Aligned_cols=118 Identities=16% Similarity=0.131 Sum_probs=71.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHcc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQ 140 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~ 140 (243)
++||+++|+|++ +||+++|+.|...|++|+++|++++.+.. .+.+.. .+|+ +-.-..+- +.+.
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~---~~~~~~-------~~Dv----~~~~~~~~-~~~g- 65 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR---SGHRYV-------VCDL----RKDLDLLF-EKVK- 65 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---TCSEEE-------ECCT----TTCHHHHH-HHSC-
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh---cCCcEE-------Ecch----HHHHHHHH-HHhC-
Confidence 589999999987 89999999999999999999999875432 232211 1111 10001111 2344
Q ss_pred CCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCC
Q 037949 141 MKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPT 204 (243)
Q Consensus 141 l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~ 204 (243)
+.+.+|+|+|... .+++.+.+... +..+.....+..+. ++..|. .|+|+|++|..
T Consensus 66 -~iD~lVnnAG~~~~~~~~~~~~~~~~~~-------~~~n~~~~~~~~~~-~~~~m~~~~~G~ii~i~S~~ 127 (234)
T d1o5ia_ 66 -EVDILVLNAGGPKAGFFDELTNEDFKEA-------IDSLFLNMIKIVRN-YLPAMKEKGWGRIVAITSFS 127 (234)
T ss_dssp -CCSEEEECCCCCCCBCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCGG
T ss_pred -CCcEEEecccccCCcchhhhhhHHHHHH-------hhhhhhhhhhhhhc-cccccccccccccccccccc
Confidence 4578888888653 23444544331 22233222222233 565553 38999999854
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=98.54 E-value=2.1e-07 Score=72.86 Aligned_cols=85 Identities=18% Similarity=0.141 Sum_probs=64.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc----------------ccCHHhhhcCCcEEEEccC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP----------------VLTREDVVSEAGLFVTTTE 128 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~----------------~~~~~~~~~~aDvvi~a~G 128 (243)
|++.|+|+|.+|..+|..|...|.+|+++|+++.+.+.....+.. ..+..+.++++|+++.|+.
T Consensus 2 k~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v~ 81 (184)
T d1bg6a2 2 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 81 (184)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEEc
Confidence 799999999999999999999999999999999887665543311 1235677899999999976
Q ss_pred Chh---cccHHHHccCCCCeEEEEe
Q 037949 129 NAD---IIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 129 ~~~---~i~~~~l~~l~~g~~vvnv 150 (243)
... ++. +.-+.++++..++..
T Consensus 82 ~~~~~~~~~-~i~~~l~~~~~iv~~ 105 (184)
T d1bg6a2 82 AIHHASIAA-NIASYISEGQLIILN 105 (184)
T ss_dssp GGGHHHHHH-HHGGGCCTTCEEEES
T ss_pred hhHHHHHHH-HhhhccCCCCEEEEe
Confidence 543 232 334567788877643
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.54 E-value=9e-08 Score=80.52 Aligned_cols=125 Identities=14% Similarity=0.175 Sum_probs=74.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-CCcccCHHhhhcCCcEEEEcc-CC----hhccc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTE-GIPVLTREDVVSEAGLFVTTT-EN----ADIIM 134 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G~~~~~~~~~~~~aDvvi~a~-G~----~~~i~ 134 (243)
++||+|+|+|++ +||+++|+.|...|++|+++|+++.+++...+. +.. +.-..+.|- .. ..+++
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~---------~~~~~~~~Dv~~~~~v~~~~~ 74 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---------DVISFVHCDVTKDEDVRNLVD 74 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---------TTEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC---------CceEEEEccCCCHHHHHHHHH
Confidence 789999999988 899999999999999999999998876544321 100 000011120 11 11221
Q ss_pred H--HHHccCCCCeEEEEecCCC------CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCC
Q 037949 135 V--RHMKQMKNAAIVCNIGHFD------NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCP 203 (243)
Q Consensus 135 ~--~~l~~l~~g~~vvnvg~~~------~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~ 203 (243)
. +.+. +.+.+|+|+|... .+++.+.+... +..+....++.... +++.| ..|+|+|++|.
T Consensus 75 ~~~~~~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~-------~~vNl~g~~~~~~~-~~~~m~~~~~g~ii~iss~ 144 (268)
T d2bgka1 75 TTIAKHG--KLDIMFGNVGVLSTTPYSILEAGNEDFKRV-------MDINVYGAFLVAKH-AARVMIPAKKGSIVFTASI 144 (268)
T ss_dssp HHHHHHS--CCCEEEECCCCCCSSCSSTTTCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHGGGTCEEEEEECCG
T ss_pred HHHHHcC--CcceeccccccccCCCcccccCcHHHHHHH-------HHHhhcchhhhhhh-hcchHhhcCCCCccccccc
Confidence 1 2244 5588888998653 12344444331 22333332333334 67665 34899999986
Q ss_pred CC
Q 037949 204 TG 205 (243)
Q Consensus 204 ~g 205 (243)
.+
T Consensus 145 ~~ 146 (268)
T d2bgka1 145 SS 146 (268)
T ss_dssp GG
T ss_pred cc
Confidence 43
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.51 E-value=1.6e-07 Score=74.17 Aligned_cols=91 Identities=21% Similarity=0.185 Sum_probs=74.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch-hHHHHhhcCCcccCHHhhhcCCcEEEEccCC---hhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI-CALQALTEGIPVLTREDVVSEAGLFVTTTEN---ADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~-r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~---~~~i~~~ 136 (243)
.+++|+|.|+|||.-|.+-|+.||..|.+|+|.=+... ....|...|+++.+.+|+++.+|+|...+.. +.+...+
T Consensus 13 ~ik~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~~~~eA~~~aDiim~L~PD~~q~~vy~~~ 92 (182)
T d1np3a2 13 IIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEE 92 (182)
T ss_dssp HHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHH
T ss_pred HHCCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccccHHHHhhhcCeeeeecchHHHHHHHHHh
Confidence 36899999999999999999999999999998755433 3567888999999999999999999887642 3344444
Q ss_pred HHccCCCCeEEEEec
Q 037949 137 HMKQMKNAAIVCNIG 151 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg 151 (243)
....|++|..+...-
T Consensus 93 I~p~lk~g~~L~FaH 107 (182)
T d1np3a2 93 IEPNLKKGATLAFAH 107 (182)
T ss_dssp TGGGCCTTCEEEESC
T ss_pred hhhhcCCCcEEEEec
Confidence 567889999888743
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.49 E-value=3.9e-07 Score=71.89 Aligned_cols=81 Identities=25% Similarity=0.252 Sum_probs=68.3
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+|+|+|-+ .+|+.++..|...|+.|++++..... +.+..+++|+++.++|.++.+..
T Consensus 33 ~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~-------------l~~~~~~aDivi~a~G~~~~i~~- 98 (170)
T d1a4ia1 33 TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH-------------LDEEVNKGDILVVATGQPEMVKG- 98 (170)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS-------------HHHHHTTCSEEEECCCCTTCBCG-
T ss_pred hCcccccceEEEEecCCccchHHHHHHHhccCceEEEeccccc-------------HHHHHhhccchhhcccccccccc-
Confidence 3456899999999999 69999999999999999999775542 33456789999999999999975
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
+.+++|++++++|...
T Consensus 99 --~~vk~g~iviDvgi~~ 114 (170)
T d1a4ia1 99 --EWIKPGAIVIDCGINY 114 (170)
T ss_dssp --GGSCTTCEEEECCCBC
T ss_pred --ccccCCCeEeccCccc
Confidence 4679999999999863
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.49 E-value=9e-09 Score=86.76 Aligned_cols=128 Identities=14% Similarity=0.196 Sum_probs=73.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH-HhhcCCcccCHHhhhcCCcEEE-Ecc-CCh----hc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ-ALTEGIPVLTREDVVSEAGLFV-TTT-ENA----DI 132 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~-a~~~G~~~~~~~~~~~~aDvvi-~a~-G~~----~~ 132 (243)
.++||+++|+|++ +||+++|+.|...|++|++++++.+.... ..+. ..+ .+.++.. .|- ..+ .+
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~------~~~--~g~~~~~~~~Dvt~~~~v~~~ 75 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEE------IKK--VGGEAIAVKGDVTVESDVINL 75 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH------HHH--TTCEEEEEECCTTSHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH------HHh--cCCcEEEEEccCCCHHHHHHH
Confidence 4799999999987 99999999999999999999998653222 1110 000 0122221 110 111 11
Q ss_pred ccH--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh-hc--C-CeecccC
Q 037949 133 IMV--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL-AE--R-LLMNLGC 202 (243)
Q Consensus 133 i~~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll-~~--G-~ivNl~s 202 (243)
++. +.+. +.+.+|+|+|... .+++.+.+... +..+.....+..+. +++.| ++ | .|+|++|
T Consensus 76 ~~~~~~~~G--~iDiLVnnAG~~~~~~~~~~~~~~~~~~-------~~vNl~g~~~~~~~-~~~~m~~~~~g~~Iv~isS 145 (261)
T d1geea_ 76 VQSAIKEFG--KLDVMINNAGLENPVSSHEMSLSDWNKV-------IDTNLTGAFLGSRE-AIKYFVENDIKGTVINMSS 145 (261)
T ss_dssp HHHHHHHHS--CCCEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHTTCCCEEEEECC
T ss_pred HHHHHHHhC--CCCEeeccceecCCcchhhcCHHHHHHH-------HHHhcccchhHHHH-Hhhhhcccccccccccccc
Confidence 211 1244 5588899998764 23455555431 23344333333334 67655 33 4 4999998
Q ss_pred CCCC
Q 037949 203 PTGH 206 (243)
Q Consensus 203 ~~g~ 206 (243)
..+.
T Consensus 146 ~~~~ 149 (261)
T d1geea_ 146 VHEK 149 (261)
T ss_dssp GGGT
T ss_pred chhc
Confidence 6543
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.49 E-value=1.2e-07 Score=78.85 Aligned_cols=43 Identities=21% Similarity=0.279 Sum_probs=39.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL 104 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~ 104 (243)
++||+++|+|++ +||+++|+.|...|++|+++|+++.++....
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~ 46 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA 46 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 689999999987 8999999999999999999999988775544
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=98.49 E-value=3.1e-07 Score=72.14 Aligned_cols=79 Identities=25% Similarity=0.221 Sum_probs=67.2
Q ss_pred cccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHH
Q 037949 59 DITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 59 ~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~ 137 (243)
+..+.||+|+|+|-+ .+|+.++..|...||+|++++.... ++.+.++.||+++.++|.++.++.
T Consensus 32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~-------------~l~~~~~~ADivI~a~G~p~~i~~-- 96 (166)
T d1b0aa1 32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-------------NLRHHVENADLLIVAVGKPGFIPG-- 96 (166)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-------------CHHHHHHHCSEEEECSCCTTCBCT--
T ss_pred CcccccceEEEEeccccccHHHHHHHHHhhccccccccccc-------------hhHHHHhhhhHhhhhccCcccccc--
Confidence 446899999999999 5999999999999999999976443 334456789999999999999975
Q ss_pred HccCCCCeEEEEecCC
Q 037949 138 MKQMKNAAIVCNIGHF 153 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~ 153 (243)
+++|+|++++++|..
T Consensus 97 -~~vk~g~vvIDvGi~ 111 (166)
T d1b0aa1 97 -DWIKEGAIVIDVGIN 111 (166)
T ss_dssp -TTSCTTCEEEECCCE
T ss_pred -cccCCCcEEEecCce
Confidence 467999999999975
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.48 E-value=6.8e-08 Score=80.61 Aligned_cols=123 Identities=11% Similarity=-0.006 Sum_probs=72.9
Q ss_pred EEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH--HHHccCC
Q 037949 66 IAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV--RHMKQMK 142 (243)
Q Consensus 66 ~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~--~~l~~l~ 142 (243)
|++|+|++ +||+++|+.|...|++|+++|++..++++....+ .....+|+.-+. ....+++. +.+. +
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~-------~~~~~~dv~~~~-~~~~~~~~~~~~~G--~ 71 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA-------ETYPQLKPMSEQ-EPAELIEAVTSAYG--Q 71 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH-------HHCTTSEECCCC-SHHHHHHHHHHHHS--C
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh-------CcEEEeccCCHH-HHHHHHHHHHHHcC--C
Confidence 79999998 8999999999999999999999877664433211 111234432111 11222221 2344 4
Q ss_pred CCeEEEEecCCC--C---CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCCCC
Q 037949 143 NAAIVCNIGHFD--N---EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPTGH 206 (243)
Q Consensus 143 ~g~~vvnvg~~~--~---~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~g~ 206 (243)
.+.+|+|+|... . +++.+++... +..+....++.... ++..|. .|+|||++|..+.
T Consensus 72 iDiLVnNAg~~~~~~~~~~~~~e~~~~~-------~~vnl~~~~~~~~~-~~~~m~~~~~G~IV~isS~~~~ 135 (252)
T d1zmta1 72 VDVLVSNDIFAPEFQPIDKYAVEDYRGA-------VEALQIRPFALVNA-VASQMKKRKSGHIIFITSATPF 135 (252)
T ss_dssp CCEEEEECCCCCCCCCGGGSCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCCEEEEECCSTTT
T ss_pred CCEEEECCcCCCCCCChhhCCHHHHHHH-------HHHHhHHHHHHHHH-HHHhhcccccceeecccccccc
Confidence 588888988642 2 2444444431 22333322233333 666662 4999999997643
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.47 E-value=6.5e-08 Score=80.94 Aligned_cols=125 Identities=14% Similarity=0.096 Sum_probs=72.2
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEE-Ecc-CC----hhcccHH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFV-TTT-EN----ADIIMVR 136 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi-~a~-G~----~~~i~~~ 136 (243)
||.++|+|++ +||+++|+.|...|++|+++++++++++...+. +.+ .+.++.. .|- .. ..+++ +
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~------l~~--~g~~~~~~~~Dvs~~~~v~~~~~-~ 72 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE------LRE--AGVEADGRTCDVRSVPEIEALVA-A 72 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHH--TTCCEEEEECCTTCHHHHHHHHH-H
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHh--cCCcEEEEEeecCCHHHHHHHHH-H
Confidence 7999999988 899999999999999999999998876543321 000 0112211 110 11 12222 1
Q ss_pred HHccC-CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHh---hh--cCCeecccCCCC
Q 037949 137 HMKQM-KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIII---LA--ERLLMNLGCPTG 205 (243)
Q Consensus 137 ~l~~l-~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~l---l~--~G~ivNl~s~~g 205 (243)
..+.. +.+.+|+|+|... .+++.+.+... +..+.....+..+. +++. .. .|+|+|++|..+
T Consensus 73 ~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~-------~~vNl~g~~~~~~~-~~p~~~~~~~~~g~Ii~i~S~~~ 143 (257)
T d2rhca1 73 VVERYGPVDVLVNNAGRPGGGATAELADELWLDV-------VETNLTGVFRVTKQ-VLKAGGMLERGTGRIVNIASTGG 143 (257)
T ss_dssp HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHTTTSHHHHTEEEEEEECCGGG
T ss_pred HHHHhCCCCEEEecccccCCCChHHcCHHHHHHH-------HHHHhhhhhHHHHH-HhHHHHHHhcCCccccccccccc
Confidence 22222 4578888988764 23455555431 22333333333223 5542 32 379999998643
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.47 E-value=1.3e-07 Score=80.93 Aligned_cols=127 Identities=16% Similarity=0.152 Sum_probs=74.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhh---hcCCcEEE-Ecc-CCh----
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV---VSEAGLFV-TTT-ENA---- 130 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~---~~~aDvvi-~a~-G~~---- 130 (243)
.++||+++|+|++ +||+++|+.|...|++|+++++++.++..+.+. +... ..+.+++. .|- .++
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~e------l~~~~~~~~~~~~~~~~~Dvs~~~~v~ 82 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADE------LQANLPPTKQARVIPIQCNIRNEEEVN 82 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHhhhccccCceEEEEeccCCCHHHHH
Confidence 4899999999988 899999999999999999999998876543321 0000 01233332 221 111
Q ss_pred hcccH--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeeccc
Q 037949 131 DIIMV--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLG 201 (243)
Q Consensus 131 ~~i~~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~ 201 (243)
.+++. +.+. +.+.+|+|+|... .+++.+.+... +..+....++.... +++.| ..|+|+|++
T Consensus 83 ~~~~~~~~~~G--~iDiLVnnAg~~~~~~~~~~~~e~~~~~-------~~vNl~g~~~~~~~-~~~~m~~~~~g~Ii~~s 152 (297)
T d1yxma1 83 NLVKSTLDTFG--KINFLVNNGGGQFLSPAEHISSKGWHAV-------LETNLTGTFYMCKA-VYSSWMKEHGGSIVNII 152 (297)
T ss_dssp HHHHHHHHHHS--CCCEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHTHHHHCEEEEEEC
T ss_pred HHHHHHHHHhC--CeEEEEeeccccccCchhhhhhhhhhhh-------hcccccchhhHHHH-HHHhhcccccccccccc
Confidence 22221 1233 5588888888653 23455555431 22333333333333 56554 348899987
Q ss_pred CC
Q 037949 202 CP 203 (243)
Q Consensus 202 s~ 203 (243)
+.
T Consensus 153 s~ 154 (297)
T d1yxma1 153 VP 154 (297)
T ss_dssp CC
T ss_pred cc
Confidence 64
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.46 E-value=9.6e-08 Score=80.79 Aligned_cols=41 Identities=20% Similarity=0.238 Sum_probs=37.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
++||+++|+|++ +||+++|+.|...|++|+++|++++++.+
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~ 44 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE 44 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 689999999987 99999999999999999999999887644
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.45 E-value=1e-07 Score=79.68 Aligned_cols=126 Identities=17% Similarity=0.166 Sum_probs=71.6
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEcc-CCh----hcccHHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTTT-ENA----DIIMVRH 137 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a~-G~~----~~i~~~~ 137 (243)
|.++|+|++ +||+++|+.|...|++|+++|+++.+++...+. +.+ .+.++. +.|- ..+ .+++ +.
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~------i~~--~g~~~~~~~~Dv~~~~~v~~~~~-~~ 72 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASE------INQ--AGGHAVAVKVDVSDRDQVFAAVE-QA 72 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HHH--TTCCEEEEECCTTSHHHHHHHHH-HH
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------HHh--cCCcEEEEEeeCCCHHHHHHHHH-HH
Confidence 457999988 899999999999999999999998876443321 000 011221 1120 111 1222 12
Q ss_pred HccC-CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHh-hhc---CCeecccCCCCCc
Q 037949 138 MKQM-KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIII-LAE---RLLMNLGCPTGHP 207 (243)
Q Consensus 138 l~~l-~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~l-l~~---G~ivNl~s~~g~p 207 (243)
.+.. +.+.+|+|+|... .+++.+.+... +..+.....+.... +++. +.+ |+|+|++|..++.
T Consensus 73 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~-------~~vNl~g~~~~~~~-~~~~m~~~~~~g~Iv~isS~~~~~ 143 (255)
T d1gega_ 73 RKTLGGFDVIVNNAGVAPSTPIESITPEIVDKV-------YNINVKGVIWGIQA-AVEAFKKEGHGGKIINACSQAGHV 143 (255)
T ss_dssp HHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTSCEEEEEECCGGGTS
T ss_pred HHHhCCccEEEecccccccCcHHHhhhhhhhhh-------hhhcccchhhhhhh-hcchhhhhccccccccccchhhcc
Confidence 2222 5578888988764 23455555431 23344333333333 5654 332 6699999866543
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.44 E-value=8.1e-07 Score=70.82 Aligned_cols=51 Identities=33% Similarity=0.257 Sum_probs=42.4
Q ss_pred hhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHH
Q 037949 53 GLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQA 103 (243)
Q Consensus 53 av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a 103 (243)
-+....+..++||+++|+|+ |+||+.+|+.|...|++|++++++++++...
T Consensus 12 ~~~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~ 63 (191)
T d1luaa1 12 LVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAA 63 (191)
T ss_dssp HHHHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred HHHHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHH
Confidence 33334455789999999996 5999999999999999999999999876443
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.43 E-value=2e-07 Score=78.15 Aligned_cols=44 Identities=23% Similarity=0.291 Sum_probs=39.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL 104 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~ 104 (243)
.++||+|+|+|+. .||+++|+.|...|++|+++++++.+++.+.
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~ 47 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL 47 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 5789999999977 8999999999999999999999988765443
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=98.42 E-value=6.3e-07 Score=69.08 Aligned_cols=94 Identities=12% Similarity=0.166 Sum_probs=73.8
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH-hhcCCcc-cCHHhhhcCCcEEEEccCChhcccHHHHccCCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA-LTEGIPV-LTREDVVSEAGLFVTTTENADIIMVRHMKQMKN 143 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a-~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~ 143 (243)
++++||+|.+|.+++..+...|.+|+++++++++.... ...|..+ .+..++++.+|+|+.|+. |..+. +.++.+++
T Consensus 2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~~dvIilavk-p~~~~-~vl~~l~~ 79 (152)
T d2ahra2 2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFE-TVLKPLHF 79 (152)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHH-HHHTTSCC
T ss_pred EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeechhhhhhhccceeeeecc-hHhHH-HHhhhccc
Confidence 58999999999999999999999999999998876553 3457654 467888899999999973 44453 57888889
Q ss_pred CeEEEEecCCCCCCChhHHHH
Q 037949 144 AAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 144 g~~vvnvg~~~~~id~~~l~~ 164 (243)
+..++++..+ +..+.+..
T Consensus 80 ~~~iis~~ag---i~~~~l~~ 97 (152)
T d2ahra2 80 KQPIISMAAG---ISLQRLAT 97 (152)
T ss_dssp CSCEEECCTT---CCHHHHHH
T ss_pred ceeEeccccc---ccHHHHHh
Confidence 9988876553 45566654
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=98.38 E-value=7.5e-07 Score=73.54 Aligned_cols=82 Identities=17% Similarity=0.289 Sum_probs=66.0
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcccCHHhhh-cCCcEEEEccCChhcccHHH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPVLTREDVV-SEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~~~~~~~~-~~aDvvi~a~G~~~~i~~~~ 137 (243)
..+.|++|+|-|+|.+|..+|+.|...|++|+++|.++.+...+.. .|....+.++.+ ..+||++.|.- ...|+.+.
T Consensus 35 ~~l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~cDIl~PcA~-~~~I~~~~ 113 (230)
T d1leha1 35 DSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCAL-GAVLNDFT 113 (230)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECSC-SCCBSTTH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccCCcccccccccEeccccc-ccccChHH
Confidence 3589999999999999999999999999999999999887655443 466666666654 47999999963 34577767
Q ss_pred HccCC
Q 037949 138 MKQMK 142 (243)
Q Consensus 138 l~~l~ 142 (243)
.+.++
T Consensus 114 ~~~l~ 118 (230)
T d1leha1 114 IPQLK 118 (230)
T ss_dssp HHHCC
T ss_pred hhccC
Confidence 77774
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.37 E-value=1.2e-07 Score=78.93 Aligned_cols=41 Identities=29% Similarity=0.221 Sum_probs=36.2
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.++||+++|+|++ +||+++|+.|...|++|+++++++....
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~ 48 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRP 48 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHH
Confidence 5799999999985 6999999999999999999999876543
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.37 E-value=1.3e-07 Score=79.30 Aligned_cols=43 Identities=26% Similarity=0.246 Sum_probs=38.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL 104 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~ 104 (243)
++||+++|+|++ +||+++|+.|...|++|+++++++.+++...
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~ 46 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR 46 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 689999999988 9999999999999999999999988765443
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.37 E-value=2e-08 Score=84.15 Aligned_cols=40 Identities=8% Similarity=-0.048 Sum_probs=34.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.++||+|+|+|++ +||+.+|+.+...|++|+++.++.++.
T Consensus 2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~ 42 (254)
T d1sbya1 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP 42 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccH
Confidence 4789999999998 899999999999999988876554443
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.36 E-value=1.6e-07 Score=79.14 Aligned_cols=43 Identities=21% Similarity=0.158 Sum_probs=38.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL 104 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~ 104 (243)
++||+++|+|++ +||+++|+.|...|++|+++|+++.+++...
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~ 46 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR 46 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 689999999988 8999999999999999999999988765443
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.36 E-value=1.7e-07 Score=78.17 Aligned_cols=43 Identities=19% Similarity=0.170 Sum_probs=37.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHh---CCCEEEEEeCCchhHHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKA---VGARVMGTEIDLICALQA 103 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~---~Ga~V~v~d~~~~r~~~a 103 (243)
.+.||.++|+|++ +||+++|+.|.. .|++|+++++++.+++..
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~ 49 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQL 49 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHH
Confidence 3789999999998 999999999864 799999999999876543
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.35 E-value=8.2e-07 Score=71.18 Aligned_cols=96 Identities=17% Similarity=0.161 Sum_probs=64.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCCc-------------------ccCHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGIP-------------------VLTRE 114 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~~-------------------~~~~~ 114 (243)
++|.|+|+|.||..+|..+...|.+|+++|+++..++.+.. .+.. ..+..
T Consensus 5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d~~ 84 (192)
T d1f0ya2 5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 84 (192)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccchhH
Confidence 79999999999999999999999999999999986544321 1210 11234
Q ss_pred hhhcCCcEEEEccCCh-----hcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 115 DVVSEAGLFVTTTENA-----DIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 115 ~~~~~aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+++.++|+|+||..-. .++. +.-+.+++++++..-.. .++...+..
T Consensus 85 ~a~~~ad~ViEav~E~l~~K~~v~~-~l~~~~~~~~ilasnTS---~l~i~~la~ 135 (192)
T d1f0ya2 85 SVVHSTDLVVEAIVENLKVKNELFK-RLDKFAAEHTIFASNTS---SLQITSIAN 135 (192)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHH-HHTTTSCTTCEEEECCS---SSCHHHHHT
T ss_pred hhhcccceehhhcccchhHHHHHHH-HHhhhcccCceeeccCc---ccccchhhh
Confidence 5567899999996432 2232 22234577777764222 255555544
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=98.34 E-value=1.2e-06 Score=68.67 Aligned_cols=106 Identities=18% Similarity=0.129 Sum_probs=71.2
Q ss_pred cchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc----C-CcccCHHh-hhcCCc
Q 037949 48 HSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE----G-IPVLTRED-VVSEAG 121 (243)
Q Consensus 48 ~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~----G-~~~~~~~~-~~~~aD 121 (243)
.++++++++. +..++||+|+|+|+|+.+++++..|...|++|+++++++++....... + ....+..+ ....+|
T Consensus 3 ~Gf~~~l~~~-~~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~d 81 (170)
T d1nyta1 3 VGLLSDLERL-SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFD 81 (170)
T ss_dssp HHHHHHHHHH-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCS
T ss_pred hHHHHHHHHc-CCCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccccccccc
Confidence 3556677654 456899999999999999999999999999999999998876443221 1 12223332 235789
Q ss_pred EEEEccCC--hhcccHHHHccCCCCeEEEEecCCC
Q 037949 122 LFVTTTEN--ADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 122 vvi~a~G~--~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++|+||.. .+-.....++.++++..+..+=..+
T Consensus 82 liIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P 116 (170)
T d1nyta1 82 LIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQK 116 (170)
T ss_dssp EEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCS
T ss_pred eeecccccCcccCCCCCcHHHhccCcEEEEeecCC
Confidence 99999742 1111111245567788777765543
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.34 E-value=1.2e-07 Score=80.06 Aligned_cols=42 Identities=24% Similarity=0.256 Sum_probs=38.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQA 103 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a 103 (243)
++||+++|+|++ +||+++|+.|...|++|+++|+++.+++..
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~ 44 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEET 44 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 689999999998 899999999999999999999998876544
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.32 E-value=2.2e-07 Score=77.77 Aligned_cols=42 Identities=21% Similarity=0.223 Sum_probs=38.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.++||+++|+|++ +||+++|+.|...|++|+++++++.++.+
T Consensus 6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~ 48 (260)
T d1h5qa_ 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE 48 (260)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 5789999999988 89999999999999999999999877544
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.32 E-value=5.2e-07 Score=67.53 Aligned_cols=66 Identities=12% Similarity=0.119 Sum_probs=53.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C------HHhh-hcCCcEEEEccCCh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T------REDV-VSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~------~~~~-~~~aDvvi~a~G~~ 130 (243)
|+++|+|+|.+|+.+|+.|...|.+|+++|.|+.+...+...|..+. + +.++ +..+|.++.+++..
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~ 75 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 75 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCch
Confidence 57899999999999999999999999999999999877777775431 1 2232 56899988887653
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=98.26 E-value=2.4e-06 Score=66.23 Aligned_cols=89 Identities=17% Similarity=0.181 Sum_probs=68.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCCc--c-cCHHh-hhcCCcEEEEccCChh---cccH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGIP--V-LTRED-VVSEAGLFVTTTENAD---IIMV 135 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~~--~-~~~~~-~~~~aDvvi~a~G~~~---~i~~ 135 (243)
|+++|+|+|.||..+|+.|+..|. +|+++|+++..++.+.+.|.- . .+..+ ....+|+|+.|+.... .++
T Consensus 2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~~~~~~vl~- 80 (171)
T d2g5ca2 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAK- 80 (171)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHH-
T ss_pred CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCCchhhhhhhh-
Confidence 579999999999999999999995 799999999988888887752 2 22333 3347999999976432 333
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+..+.++++.+++.++...
T Consensus 81 ~l~~~~~~~~ii~d~~s~k 99 (171)
T d2g5ca2 81 KLSYILSEDATVTDQGSVK 99 (171)
T ss_dssp HHHHHSCTTCEEEECCSCC
T ss_pred hhhcccccccccccccccc
Confidence 3456689999999988764
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=98.25 E-value=1.1e-06 Score=67.48 Aligned_cols=86 Identities=15% Similarity=0.127 Sum_probs=61.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH--HHHccCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV--RHMKQMK 142 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~--~~l~~l~ 142 (243)
++.|||+|.+|..+|+.|+..|.+|+++|+++.+.......++. ..+..++++.+|+|+.|+........ +... .
T Consensus 2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~~~~~~~~~~~~~~--~ 79 (152)
T d1i36a2 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVALGAARRAGR--H 79 (152)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGGGHHHHHHHHHT--T
T ss_pred EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEecCchHHHHHHhhcc--c
Confidence 58999999999999999999999999998877665444444443 34567888899999999865443321 1122 3
Q ss_pred CCeEEEEecCC
Q 037949 143 NAAIVCNIGHF 153 (243)
Q Consensus 143 ~g~~vvnvg~~ 153 (243)
.+..++.++..
T Consensus 80 ~~~~~id~st~ 90 (152)
T d1i36a2 80 VRGIYVDINNI 90 (152)
T ss_dssp CCSEEEECSCC
T ss_pred CCceeeccCcC
Confidence 35667765543
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=98.25 E-value=1.9e-06 Score=67.67 Aligned_cols=90 Identities=8% Similarity=0.029 Sum_probs=67.6
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc------cc---CHHhhhcCCcEEEEccCChhc---
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP------VL---TREDVVSEAGLFVTTTENADI--- 132 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~------~~---~~~~~~~~aDvvi~a~G~~~~--- 132 (243)
.+|.|||.|.+|..+|+.|...|.+|+++|+++++.+.....+.. .. ++.+.+..+|+++.+......
T Consensus 3 ~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~ 82 (176)
T d2pgda2 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (176)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHH
Confidence 579999999999999999999999999999999987665554432 11 234456788999888644322
Q ss_pred ccHHHHccCCCCeEEEEecCCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+....+..++++.++++.+...
T Consensus 83 v~~~l~~~~~~g~iiid~sT~~ 104 (176)
T d2pgda2 83 FIEKLVPLLDIGDIIIDGGNSE 104 (176)
T ss_dssp HHHHHHHHCCTTCEEEECSCCC
T ss_pred HHHHHHhccccCcEEEecCcch
Confidence 1224567789999999987654
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.23 E-value=3.2e-07 Score=76.03 Aligned_cols=123 Identities=11% Similarity=0.083 Sum_probs=71.3
Q ss_pred EEEEEcCC-hHHHHHHHHHHhCCCE-------EEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEE-EEc-cCCh----h
Q 037949 66 IAVDCGHG-DVGRGCAAALKAVGAR-------VMGTEIDLICALQALTEGIPVLTREDVVSEAGLF-VTT-TENA----D 131 (243)
Q Consensus 66 ~vlViG~G-~IG~~~A~~l~~~Ga~-------V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a-~G~~----~ 131 (243)
.|+|+|++ +||+++|+.|...|++ |+.+++++.+++..... ..+ .+.++. +.| ...+ .
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~------~~~--~g~~~~~~~~Dvt~~~~v~~ 74 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLE------CRA--EGALTDTITADISDMADVRR 74 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHH------HHT--TTCEEEEEECCTTSHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHH------HHh--cCCcEEEEEecCCCHHHHHH
Confidence 47899998 8999999999999997 88899998876443321 000 011111 111 0111 1
Q ss_pred cccH--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccC
Q 037949 132 IIMV--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGC 202 (243)
Q Consensus 132 ~i~~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s 202 (243)
+++. +.+. +.+.+|+|+|... .+++.+.+... +..|....++..+. +++.|. .|+|+|++|
T Consensus 75 ~~~~~~~~~g--~iDilvnnAg~~~~~~~~~~~~~~~~~~-------~~vNl~g~~~~~~~-~~~~m~~~~~G~Ii~isS 144 (240)
T d2bd0a1 75 LTTHIVERYG--HIDCLVNNAGVGRFGALSDLTEEDFDYT-------MNTNLKGTFFLTQA-LFALMERQHSGHIFFITS 144 (240)
T ss_dssp HHHHHHHHTS--CCSEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECC
T ss_pred HHHHHHHHcC--CcceeecccccccCCccccCCHHHHhhc-------CCEeehHHHHHHHH-HhHHHHhcCCCceEEEec
Confidence 1211 1233 4588888888764 23455555431 23344333333334 677773 489999999
Q ss_pred CCCC
Q 037949 203 PTGH 206 (243)
Q Consensus 203 ~~g~ 206 (243)
..|.
T Consensus 145 ~~~~ 148 (240)
T d2bd0a1 145 VAAT 148 (240)
T ss_dssp GGGT
T ss_pred hhhc
Confidence 6544
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.21 E-value=1.9e-07 Score=78.60 Aligned_cols=125 Identities=13% Similarity=0.019 Sum_probs=68.9
Q ss_pred cCcEE-EEEcCC-hHHHHHHHHHHh-CCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEc-cCCh----hccc
Q 037949 63 AGKIA-VDCGHG-DVGRGCAAALKA-VGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTT-TENA----DIIM 134 (243)
Q Consensus 63 ~g~~v-lViG~G-~IG~~~A~~l~~-~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a-~G~~----~~i~ 134 (243)
+||+| +|+|++ +||+++|+.|.. .|++|+++++++++++.+.+. +.+.-..+.+ +.| .... .+++
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~------l~~~~~~~~~-~~~Dvs~~~sv~~~~~ 73 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQ------LQAEGLSPRF-HQLDIDDLQSIRALRD 73 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHH------HHHTTCCCEE-EECCTTCHHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH------HHhcCCcEEE-EEEecCCHHHHHHHHH
Confidence 36666 788887 999999999876 489999999999887554421 0000001111 112 1111 1111
Q ss_pred --HHHHccCCCCeEEEEecCCC-CC---CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh-hcCCeecccCCC
Q 037949 135 --VRHMKQMKNAAIVCNIGHFD-NE---IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL-AERLLMNLGCPT 204 (243)
Q Consensus 135 --~~~l~~l~~g~~vvnvg~~~-~~---id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll-~~G~ivNl~s~~ 204 (243)
.+.+. +-+.+|+|+|+.. .. .+.+.+.. .+..|.....+.... .+++| ++|+|||++|..
T Consensus 74 ~~~~~~g--~iDiLVnNAGi~~~~~~~~~~~~~~~~-------~~~vN~~g~~~l~~~-~lp~m~~~g~ivnisS~~ 140 (275)
T d1wmaa1 74 FLRKEYG--GLDVLVNNAGIAFKVADPTPFHIQAEV-------TMKTNFFGTRDVCTE-LLPLIKPQGRVVNVSSIM 140 (275)
T ss_dssp HHHHHHS--SEEEEEECCCCCCCTTCCSCHHHHHHH-------HHHHHTHHHHHHHHH-HGGGEEEEEEEEEECCHH
T ss_pred HHHHhcC--CcEEEEEcCCcCCCCCcccCCHHHHHH-------HHHHHHHHHHHHHHH-HHHHHHhcCCcccccccc
Confidence 12344 4588999999763 11 11222221 122333332333333 56666 569999999964
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.21 E-value=1.6e-06 Score=68.28 Aligned_cols=90 Identities=20% Similarity=0.245 Sum_probs=66.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-----c-----cC---HHhhhcCCcEEEEc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-----V-----LT---REDVVSEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-----~-----~~---~~~~~~~aDvvi~a 126 (243)
.+.||+|+|+|-+ -+|+.+|..|...||.|+.++.+.... .-...... + .. +.+....+|+++.+
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsa 104 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK-FTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITG 104 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE-EESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccc-cccccceeeeeeccccccccchhHHhhccccCCEEEEc
Confidence 6899999999999 579999999999999999998764321 00000000 0 01 33445689999999
Q ss_pred cCChhc-ccHHHHccCCCCeEEEEecCCC
Q 037949 127 TENADI-IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~-i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+|.++. +.. +++|+|++++++|...
T Consensus 105 vG~p~~~i~~---d~ik~GavvIDvGi~~ 130 (171)
T d1edza1 105 VPSENYKFPT---EYIKEGAVCINFACTK 130 (171)
T ss_dssp CCCTTCCBCT---TTSCTTEEEEECSSSC
T ss_pred cCCCccccCh---hhcccCceEeeccccc
Confidence 999986 654 4679999999999875
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.21 E-value=2.1e-07 Score=76.75 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=33.6
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.||+|+|+|++ +||+.+|+.|...|++|+++|+++..
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~ 38 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE 38 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 48999999987 89999999999999999999987653
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.20 E-value=1.6e-06 Score=71.72 Aligned_cols=43 Identities=19% Similarity=0.322 Sum_probs=38.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL 104 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~ 104 (243)
++||+++|+|++ .||+.+|+.|...|++|++++++..++....
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 46 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAV 46 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 689999999998 8999999999999999999999998765443
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.18 E-value=5.1e-08 Score=81.19 Aligned_cols=123 Identities=12% Similarity=0.129 Sum_probs=69.3
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc-hhHHHHhhcCCcccCHHhhhcCCcEE-EEc-cCCh----hcccHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL-ICALQALTEGIPVLTREDVVSEAGLF-VTT-TENA----DIIMVR 136 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~-~r~~~a~~~G~~~~~~~~~~~~aDvv-i~a-~G~~----~~i~~~ 136 (243)
..|+|+|++ +||+++|+.|...|++|++.+.+. ..++...+. ..+ .+.++. +.| ...+ .+++ +
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~------~~~--~g~~~~~~~~Dv~~~~~v~~~~~-~ 72 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQ------IEA--YGGQAITFGGDVSKEADVEAMMK-T 72 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH------HHH--HTCEEEEEECCTTSHHHHHHHHH-H
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH------HHH--cCCcEEEEeCCCCCHHHHHHHHH-H
Confidence 368999987 999999999999999999987644 333222110 000 012222 111 1121 1222 1
Q ss_pred HHccC-CCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCC
Q 037949 137 HMKQM-KNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPT 204 (243)
Q Consensus 137 ~l~~l-~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~ 204 (243)
..+.. +.+.+|+|+|... .+++.+.+... +..+....++..+. +++.| ..|+|||++|..
T Consensus 73 ~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~-------~~vNl~~~~~~~~~-~~~~m~~~~~G~IVnisS~~ 140 (244)
T d1edoa_ 73 AIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEV-------IDLNLTGVFLCTQA-ATKIMMKKRKGRIINIASVV 140 (244)
T ss_dssp HHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHH-------HHHHTHHHHHHHHH-HHHHHHHHTCEEEEEECCTH
T ss_pred HHHHcCCCCccccccccccccchhccchHHHHHH-------HhhhhhhHHHHHHH-HHHHHHHcCCcEEEEEcChh
Confidence 22222 5688888988764 23455555431 23344333333334 67766 359999999965
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.16 E-value=3.1e-06 Score=63.22 Aligned_cols=66 Identities=23% Similarity=0.317 Sum_probs=51.8
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCccc-----CH---Hhh-hcCCcEEEEccCChh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPVL-----TR---EDV-VSEAGLFVTTTENAD 131 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~~-----~~---~~~-~~~aDvvi~a~G~~~ 131 (243)
+|+|+|+|.+|+.+++.|...|.+|+++|.|+.+...+.. .+..++ +. .++ ++.+|.++.++.+..
T Consensus 2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~ 77 (132)
T d1lssa_ 2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE 77 (132)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHH
Confidence 6999999999999999999999999999999998766554 355432 11 222 468999998887753
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.15 E-value=5.2e-06 Score=65.54 Aligned_cols=104 Identities=13% Similarity=0.075 Sum_probs=70.6
Q ss_pred chhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh----cC--Cc----cc---C--
Q 037949 49 SLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT----EG--IP----VL---T-- 112 (243)
Q Consensus 49 ~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~----~G--~~----~~---~-- 112 (243)
+++.+++.. +..+++++|+|+|+|+.|++++..+...|+ +++++++++.+...+.. .+ +. .. +
T Consensus 4 Gf~~~l~~~-~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 82 (182)
T d1vi2a1 4 GHIRAIKES-GFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQ 82 (182)
T ss_dssp HHHHHHHHT-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHH
T ss_pred HHHHHHHHc-CCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccccc
Confidence 455666543 446899999999999999999999999999 79999998876543321 11 11 11 1
Q ss_pred -HHhhhcCCcEEEEccCC--hh----cccHHHHccCCCCeEEEEecCCC
Q 037949 113 -REDVVSEAGLFVTTTEN--AD----IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 113 -~~~~~~~aDvvi~a~G~--~~----~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
..+.+..+|++|+||.. .+ .+- ..+..++++..++.+-..+
T Consensus 83 ~~~~~~~~~diiIN~Tp~G~~~~~~~~~~-~~~~~~~~~~~v~Di~Y~p 130 (182)
T d1vi2a1 83 AFAEALASADILTNGTKVGMKPLENESLV-NDISLLHPGLLVTECVYNP 130 (182)
T ss_dssp HHHHHHHTCSEEEECSSTTSTTSCSCCSC-CCGGGSCTTCEEEECCCSS
T ss_pred chhhhhcccceeccccCCccccccchhhh-hHHHhhhcchhhHHhhcCc
Confidence 23345689999999742 21 111 1245678888998876543
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=98.13 E-value=3.2e-06 Score=64.75 Aligned_cols=94 Identities=12% Similarity=0.101 Sum_probs=65.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhh-cCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALT-EGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKN 143 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~-~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~ 143 (243)
++++||+|.+|.++++.+...| .+|+++|+++++++...+ .|+.+.+..+.+..+|+||.|+. |..+. +.++.+++
T Consensus 2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~v~~~Div~lavk-P~~~~-~v~~~l~~ 79 (152)
T d1yqga2 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELHSDDVLILAVK-PQDME-AACKNIRT 79 (152)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCCTTSEEEECSC-HHHHH-HHHTTCCC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccccccccceEEEecC-HHHHH-HhHHHHhh
Confidence 5899999999999999877666 699999999988755444 57665544445678999999975 33343 35555543
Q ss_pred -CeEEEEecCCCCCCChhHHHH
Q 037949 144 -AAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 144 -g~~vvnvg~~~~~id~~~l~~ 164 (243)
+..++++..+ ++.+.+..
T Consensus 80 ~~~~viS~~ag---~~~~~l~~ 98 (152)
T d1yqga2 80 NGALVLSVAAG---LSVGTLSR 98 (152)
T ss_dssp TTCEEEECCTT---CCHHHHHH
T ss_pred cccEEeecccC---CCHHHHHH
Confidence 5666654433 45566655
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=98.12 E-value=4.8e-06 Score=67.63 Aligned_cols=88 Identities=19% Similarity=0.112 Sum_probs=67.7
Q ss_pred ccC-cEEEEEcCChHHHHHHHHHHh------CCCEEEEE-eCCchhHHHHhhcCCc-----ccCHHhhhcCCcEEEEccC
Q 037949 62 IAG-KIAVDCGHGDVGRGCAAALKA------VGARVMGT-EIDLICALQALTEGIP-----VLTREDVVSEAGLFVTTTE 128 (243)
Q Consensus 62 l~g-~~vlViG~G~IG~~~A~~l~~------~Ga~V~v~-d~~~~r~~~a~~~G~~-----~~~~~~~~~~aDvvi~a~G 128 (243)
++| |+|.|+|||..|.+-|+.||. .|.+|++. .........|..+|++ +.+..|+++.+|+|...+.
T Consensus 41 ~kg~KkIaViGYGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~EAv~~ADiVmiLlP 120 (226)
T d1qmga2 41 FKGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLIS 120 (226)
T ss_dssp TTTCSEEEEECCSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHHHHHTCSEEEECSC
T ss_pred hcCCCEEEEEEeccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHHHHhhCCEEEEecc
Confidence 578 999999999999999999999 45667774 3333345688889986 4457888999999998864
Q ss_pred C---hhcccHHHHccCCCCeEEEEe
Q 037949 129 N---ADIIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 129 ~---~~~i~~~~l~~l~~g~~vvnv 150 (243)
. +.+.+ +....|++|..+...
T Consensus 121 De~Q~~vy~-~I~p~Lk~G~~L~Fa 144 (226)
T d1qmga2 121 DSAQADNYE-KVFSHMKPNSILGLS 144 (226)
T ss_dssp HHHHHHHHH-HHHHHSCTTCEEEES
T ss_pred hHHHHHHHH-HHHHhcCCCceeeec
Confidence 3 34453 466789999988864
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=98.11 E-value=1.6e-06 Score=69.02 Aligned_cols=96 Identities=20% Similarity=0.192 Sum_probs=63.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-----------CC-cccCH------------HhhhcCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-----------GI-PVLTR------------EDVVSEA 120 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-----------G~-~~~~~------------~~~~~~a 120 (243)
++|.|+|+|.||..+|..+...|.+|+++|++++.++.+... +. .-... .+.+.++
T Consensus 5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 84 (186)
T d1wdka3 5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNV 84 (186)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeeccccccccccc
Confidence 679999999999999999999999999999999876544321 10 00000 1234689
Q ss_pred cEEEEccCCh-----hcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 121 GLFVTTTENA-----DIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 121 Dvvi~a~G~~-----~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
|+|+||.... .++. +.-+.++++.++..-..+ +....+..
T Consensus 85 dlViEav~E~l~~K~~lf~-~l~~~~~~~~IiaSnTS~---l~i~~la~ 129 (186)
T d1wdka3 85 DLVVEAVVENPKVKQAVLA-EVENHVREDAILASNTST---ISISLLAK 129 (186)
T ss_dssp SEEEECCCSCHHHHHHHHH-HHHTTSCTTCEEEECCSS---SCHHHHGG
T ss_pred ceeeeeecchHHHHHHHHH-HHHhhcCCCeeEEecccc---ccHHHHHH
Confidence 9999997542 2232 233445778888753332 44454433
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=98.08 E-value=1.5e-06 Score=61.40 Aligned_cols=69 Identities=22% Similarity=0.217 Sum_probs=48.8
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH-hhcCCcc-c-C-HHhhhcCCcEEEEccCCh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA-LTEGIPV-L-T-REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a-~~~G~~~-~-~-~~~~~~~aDvvi~a~G~~ 130 (243)
++||+|+|+|+|..|+.+|++|...|++|+++|.++...... ...+... . . ..+.+.+.|+++..+|-+
T Consensus 3 ~~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~SPGi~ 75 (93)
T d2jfga1 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIA 75 (93)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCCHHHHHHCSEEEECTTSC
T ss_pred cCCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccchhhhccCCEEEECCCCC
Confidence 689999999999999999999999999999999865422111 1122221 1 1 133456788888887754
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.07 E-value=2.1e-07 Score=78.29 Aligned_cols=39 Identities=28% Similarity=0.438 Sum_probs=35.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.++||+++|+|++ +||+++|+.|...|++|++++++...
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~ 54 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE 54 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchH
Confidence 5899999999977 99999999999999999999987553
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=98.05 E-value=8.1e-06 Score=62.16 Aligned_cols=80 Identities=14% Similarity=0.140 Sum_probs=59.7
Q ss_pred cCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhc--ccHHHHc
Q 037949 63 AGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADI--IMVRHMK 139 (243)
Q Consensus 63 ~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~--i~~~~l~ 139 (243)
.-++|+||| .|.||..+|+.|+..|.+|.++|+++.... +....++|+++.++..... +..+...
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~------------~~~~~~~~~v~~~~~~~~~~~v~~~~~~ 75 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA------------ESILANADVVIVSVPINLTLETIERLKP 75 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH------------HHHHTTCSEEEECSCGGGHHHHHHHHGG
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc------------chhhhhccccccccchhhheeeeecccc
Confidence 457999999 899999999999999999999999876432 2334577888877644322 2224566
Q ss_pred cCCCCeEEEEecCCC
Q 037949 140 QMKNAAIVCNIGHFD 154 (243)
Q Consensus 140 ~l~~g~~vvnvg~~~ 154 (243)
.++++.++++++...
T Consensus 76 ~~~~~~iiiD~~Svk 90 (152)
T d2pv7a2 76 YLTENMLLADLTSVK 90 (152)
T ss_dssp GCCTTSEEEECCSCC
T ss_pred cccCCceEEEecccC
Confidence 778888888877654
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.00 E-value=1.1e-05 Score=62.04 Aligned_cols=90 Identities=16% Similarity=0.045 Sum_probs=60.4
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-CCcc------cC---HHhhhcCCcEEEEccCChhc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-GIPV------LT---REDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G~~~------~~---~~~~~~~aDvvi~a~G~~~~ 132 (243)
++|+|+|+|+|.+|..+|+.|...|.+|+++|++..++...... +... .. ..+.+...|+++.++.....
T Consensus 1 ~~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~ 80 (182)
T d1e5qa1 1 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH 80 (182)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhh
Confidence 46999999999999999999999999999999999987554432 2111 11 23446678888887654332
Q ss_pred ccHHHHccCCCCeEEEEecCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.. ......+.+..++..+..
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~ 100 (182)
T d1e5qa1 81 AT-VIKSAIRQKKHVVTTSYV 100 (182)
T ss_dssp HH-HHHHHHHHTCEEECSSCC
T ss_pred hH-HHHHHHhhccceeecccC
Confidence 21 122333556666665543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.95 E-value=4.5e-07 Score=74.45 Aligned_cols=36 Identities=14% Similarity=0.155 Sum_probs=32.4
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+.+|+|+|++ +||+++|+.|...|++|+++|+++..
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~ 38 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND 38 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchh
Confidence 4578999988 99999999999999999999998753
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.90 E-value=3.1e-07 Score=76.70 Aligned_cols=38 Identities=37% Similarity=0.497 Sum_probs=33.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.|.||+|+|+|++ +||+++|+.|...|++|++++.+..
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~ 41 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSS 41 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCCh
Confidence 4789999999988 8999999999999999998755443
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.84 E-value=7.6e-06 Score=67.39 Aligned_cols=38 Identities=18% Similarity=0.044 Sum_probs=33.0
Q ss_pred CcEEEEEcCC-hHHHHHHHHHH---hCCCEEEEEeCCchhHH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALK---AVGARVMGTEIDLICAL 101 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~---~~Ga~V~v~d~~~~r~~ 101 (243)
-|+|+|+|+. +||+++|+.|. ..|++|++++++++++.
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~ 43 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK 43 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 4899999997 99999999885 57899999999988754
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.82 E-value=7e-05 Score=64.17 Aligned_cols=98 Identities=18% Similarity=0.194 Sum_probs=72.7
Q ss_pred CcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh----hcCCc-ccCHHhhhcCCcEEEEccCCh-hcccH
Q 037949 64 GKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL----TEGIP-VLTREDVVSEAGLFVTTTENA-DIIMV 135 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~----~~G~~-~~~~~~~~~~aDvvi~a~G~~-~~i~~ 135 (243)
-++++|+|+|..++..+..+.. +.. +|.++++++++..... ..+.. ..+..+.+.+||+|+.||.+. +++.
T Consensus 125 ~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~a~~~aDiV~taT~s~~P~~~- 203 (320)
T d1omoa_ 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTPSRKPVVK- 203 (320)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHTSSSEEEECCCCSSCCBC-
T ss_pred ccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchhhhhccccEEEEeccCcccccc-
Confidence 4789999999999988887775 555 8999999988753332 23443 345567788999999998654 4554
Q ss_pred HHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
-+.+++|..|+.+|... .|+|.+.+..
T Consensus 204 --~~~l~~G~hv~~iGs~~p~~~Eld~~~~~~ 233 (320)
T d1omoa_ 204 --AEWVEEGTHINAIGADGPGKQELDVEILKK 233 (320)
T ss_dssp --GGGCCTTCEEEECSCCSTTCCCBCHHHHHT
T ss_pred --hhhcCCCCeEeecCCccccccccCHHHhhc
Confidence 35689999999999864 4677765544
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.81 E-value=5.9e-06 Score=63.05 Aligned_cols=35 Identities=20% Similarity=0.207 Sum_probs=32.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
.+.||+|+|+|+|.+|..-++.+...|++|+++.+
T Consensus 10 ~l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap 44 (150)
T d1kyqa1 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44 (150)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred eeCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 47899999999999999999999999999999844
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=97.79 E-value=5.6e-06 Score=63.05 Aligned_cols=85 Identities=14% Similarity=0.001 Sum_probs=57.7
Q ss_pred EEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC-CcccCHHhhhcCCcEEEEccCChhcccHHHHccCC-CC
Q 037949 67 AVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG-IPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMK-NA 144 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G-~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~-~g 144 (243)
+.+||+|.+|..+++.|+..+..+.+++++++++....+.+ ....+..++++.+|+|+.|+.. ..+. +.+..++ ++
T Consensus 2 IgfIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d-~~i~-~v~~~l~~~~ 79 (153)
T d2i76a2 2 LNFVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPD-RYIK-TVANHLNLGD 79 (153)
T ss_dssp CEEESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCT-TTHH-HHHTTTCCSS
T ss_pred EEEEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccc-hhhh-HHHhhhcccc
Confidence 57999999999999999764444568999999876655544 3455677778899999999854 3443 4666664 67
Q ss_pred eEEEEecCC
Q 037949 145 AIVCNIGHF 153 (243)
Q Consensus 145 ~~vvnvg~~ 153 (243)
.++++++-.
T Consensus 80 ~ivi~~s~~ 88 (153)
T d2i76a2 80 AVLVHCSGF 88 (153)
T ss_dssp CCEEECCSS
T ss_pred eeeeecccc
Confidence 888877653
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.78 E-value=3.6e-05 Score=61.47 Aligned_cols=87 Identities=17% Similarity=0.210 Sum_probs=60.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-c---------------------ccCHHhhhcCCcEE
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-P---------------------VLTREDVVSEAGLF 123 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~---------------------~~~~~~~~~~aDvv 123 (243)
++.|+|+|-+|+.+|..+...|.+|+++|.|+.+... ...|. . ..+..++++.+|++
T Consensus 2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~-ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~i 80 (202)
T d1mv8a2 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL-INQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (202)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH-HHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH-hcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCEE
Confidence 5899999999999999999999999999999887533 22221 0 12345567789999
Q ss_pred EEccCChh-------------cccH--HHHccCCCCeEEEEecCC
Q 037949 124 VTTTENAD-------------IIMV--RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 124 i~a~G~~~-------------~i~~--~~l~~l~~g~~vvnvg~~ 153 (243)
+-|+++|. +++. ..+....++.+++.-+-.
T Consensus 81 ~i~VpTP~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~liii~STv 125 (202)
T d1mv8a2 81 FICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTV 125 (202)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCC
T ss_pred EEecCccccccccccchhhhhhhhhhhheeecccCCcceeecccc
Confidence 99987641 1111 123445577777765543
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.75 E-value=2.1e-05 Score=64.46 Aligned_cols=44 Identities=20% Similarity=0.209 Sum_probs=39.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL 104 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~ 104 (243)
.++||+++|+|++ +||+++|+.|...|++|+++|+++..++...
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 46 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA 46 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence 5799999999988 8999999999999999999999987764433
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=97.74 E-value=8.1e-05 Score=64.39 Aligned_cols=99 Identities=15% Similarity=0.218 Sum_probs=73.4
Q ss_pred cCcEEEEEcCChHHHHHHHHHH-hCCC-EEEEEeCCchhHHHHhh-----cCCcc---cCHHhhhcCCcEEEEccCCh--
Q 037949 63 AGKIAVDCGHGDVGRGCAAALK-AVGA-RVMGTEIDLICALQALT-----EGIPV---LTREDVVSEAGLFVTTTENA-- 130 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~-~~Ga-~V~v~d~~~~r~~~a~~-----~G~~~---~~~~~~~~~aDvvi~a~G~~-- 130 (243)
.-++++|||+|..++..++.+. .++. +|.++++++.+.....+ .|..+ .+.++++++||+|+.||.++
T Consensus 127 da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Tas~s~ 206 (340)
T d1x7da_ 127 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAY 206 (340)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSE
T ss_pred CCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccccCCC
Confidence 3589999999999998777664 5777 89999999886543321 25442 35788999999999988554
Q ss_pred -hcccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 131 -DIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 131 -~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
++++ -+.+++|..|+.+|... .|+|.+.+..
T Consensus 207 ~Pv~~---~~~l~pG~hI~aiGs~~p~~~Eld~~~l~~ 241 (340)
T d1x7da_ 207 ATIIT---PDMLEPGMHLNAVGGDCPGKTELHADVLRN 241 (340)
T ss_dssp EEEEC---GGGCCTTCEEEECSCCBTTBEEECHHHHHT
T ss_pred Ccccc---hhhcCCCCEEeecccchhhhhccCHHHHhc
Confidence 4565 35689999999999763 4677765554
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.74 E-value=6.2e-05 Score=58.55 Aligned_cols=88 Identities=14% Similarity=0.091 Sum_probs=63.3
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc---------cCHHh---hhcCCcEEEEccCChhc-
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV---------LTRED---VVSEAGLFVTTTENADI- 132 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~---------~~~~~---~~~~aDvvi~a~G~~~~- 132 (243)
++.|||.|.+|..+|+.|...|.+|+++|+++++.+...+.+... .+.++ .+..++.++.+......
T Consensus 3 kIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (178)
T d1pgja2 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT 82 (178)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred EEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence 589999999999999999999999999999999876665554321 11222 23466777777554332
Q ss_pred ---ccHHHHccCCCCeEEEEecCCC
Q 037949 133 ---IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 133 ---i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++ .....++++.++++.+...
T Consensus 83 ~~~~~-~~~~~~~~~~iii~~st~~ 106 (178)
T d1pgja2 83 DSTIE-QLKKVFEKGDILVDTGNAH 106 (178)
T ss_dssp HHHHH-HHHHHCCTTCEEEECCCCC
T ss_pred hhhhh-hhhhhccccceecccCccc
Confidence 33 3566788999999877653
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.72 E-value=2e-05 Score=61.24 Aligned_cols=65 Identities=15% Similarity=0.164 Sum_probs=49.0
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-hcCCcccCHHhhhcCCcEEEEccC
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-TEGIPVLTREDVVSEAGLFVTTTE 128 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~~G~~~~~~~~~~~~aDvvi~a~G 128 (243)
++++|+|+|+|+.+++++..|+..|+ +|.++++++++...-. ..+....+.. ....+|++|+||.
T Consensus 16 ~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~-~~~~~DliINaTp 82 (167)
T d1npya1 16 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSL-ENQQADILVNVTS 82 (167)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCC-TTCCCSEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcc-cccchhhheeccc
Confidence 68999999999999999999999998 7999999988754322 2343222111 1247899999974
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.71 E-value=2.7e-05 Score=61.82 Aligned_cols=67 Identities=18% Similarity=0.037 Sum_probs=51.2
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-----cC---HHhhhcCCcEEEEccCC
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-----LT---REDVVSEAGLFVTTTEN 129 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-----~~---~~~~~~~aDvvi~a~G~ 129 (243)
..|+|+|+|+ |.||..++..|...|.+|++..+++.++......+.++ .+ +.++++++|+|+.+.|.
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~ 77 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEecc
Confidence 4689999995 79999999999999999999999988753222234432 22 24567899999999874
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.70 E-value=1.8e-06 Score=73.04 Aligned_cols=29 Identities=14% Similarity=0.179 Sum_probs=24.1
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEE
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGT 93 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~ 93 (243)
|.|+|+|++ +||+++|+.|...|++|+.+
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v 32 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKV 32 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEE
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEE
Confidence 456777987 99999999999999986544
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.70 E-value=3.4e-05 Score=60.25 Aligned_cols=79 Identities=11% Similarity=0.088 Sum_probs=55.6
Q ss_pred chhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cC--Cc--ccCHHh-hhcCCcE
Q 037949 49 SLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EG--IP--VLTRED-VVSEAGL 122 (243)
Q Consensus 49 ~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G--~~--~~~~~~-~~~~aDv 122 (243)
+++.+++.. +..++|++|+|+|+|+.+++++..|...+.+|+++.+++.++..-.. .. .. .....+ ....+|+
T Consensus 4 Gf~~~l~~~-~~~~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~di 82 (171)
T d1p77a1 4 GLVTDLQRL-NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDL 82 (171)
T ss_dssp HHHHHHHHT-TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSE
T ss_pred HHHHHHHHc-CCCCCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccccccccce
Confidence 445566543 44679999999999999999999999877799999999887543322 11 11 111111 2457899
Q ss_pred EEEccC
Q 037949 123 FVTTTE 128 (243)
Q Consensus 123 vi~a~G 128 (243)
+|.||+
T Consensus 83 iIN~tp 88 (171)
T d1p77a1 83 VINATS 88 (171)
T ss_dssp EEECCC
T ss_pred eeeccc
Confidence 999974
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.64 E-value=2.8e-05 Score=59.22 Aligned_cols=85 Identities=14% Similarity=0.019 Sum_probs=57.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc--------ccCHHhhhcCCcEEEEccCChhccc--H
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP--------VLTREDVVSEAGLFVTTTENADIIM--V 135 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~--------~~~~~~~~~~aDvvi~a~G~~~~i~--~ 135 (243)
+|+|+|+|.||..+|..|...|.+|.++++++.+.......+.+ ..+..+....+|+++.|+....+-+ .
T Consensus 2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~~~~~~~~ 81 (167)
T d1ks9a2 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVK 81 (167)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeecccchHHHHH
Confidence 69999999999999999999999999999988753211111211 0122445678999999986654311 1
Q ss_pred HHHccCCCCeEEEEe
Q 037949 136 RHMKQMKNAAIVCNI 150 (243)
Q Consensus 136 ~~l~~l~~g~~vvnv 150 (243)
..-..+.++..++..
T Consensus 82 ~l~~~~~~~~~Iv~~ 96 (167)
T d1ks9a2 82 SLASTLPVTTPILLI 96 (167)
T ss_dssp HHHTTSCTTSCEEEE
T ss_pred hhccccCcccEEeec
Confidence 223455677777764
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.62 E-value=0.00011 Score=55.96 Aligned_cols=89 Identities=13% Similarity=-0.004 Sum_probs=60.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcc---cHHHHccC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADII---MVRHMKQM 141 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i---~~~~l~~l 141 (243)
++|.+||.|.+|..+|+.|...|..| ++++++.+.......+.......+.+.++|+++.+..+...+ ....+..+
T Consensus 1 ekIg~IGlG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~ 79 (156)
T d2cvza2 1 EKVAFIGLGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL 79 (156)
T ss_dssp CCEEEECCSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC
T ss_pred CeEEEEeHHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc
Confidence 36999999999999999999888766 455555554343333222223334456789988886554321 12357778
Q ss_pred CCCeEEEEecCCC
Q 037949 142 KNAAIVCNIGHFD 154 (243)
Q Consensus 142 ~~g~~vvnvg~~~ 154 (243)
+++.++++.+...
T Consensus 80 ~~~~~iid~sT~~ 92 (156)
T d2cvza2 80 REGTYWVDATSGE 92 (156)
T ss_dssp CTTEEEEECSCCC
T ss_pred cccccccccccCC
Confidence 9999999977654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=97.62 E-value=4.2e-05 Score=64.11 Aligned_cols=42 Identities=24% Similarity=0.407 Sum_probs=38.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.++||+++|+|+. +||+++|+.|...|++|+++|+++.++..
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~ 64 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKA 64 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHH
Confidence 5899999999976 99999999999999999999999887644
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=97.59 E-value=0.0002 Score=58.89 Aligned_cols=86 Identities=22% Similarity=0.313 Sum_probs=55.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEE-EeCCc----------hhHHH-------------HhhcCCccc-CHHh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMG-TEIDL----------ICALQ-------------ALTEGIPVL-TRED 115 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v-~d~~~----------~r~~~-------------a~~~G~~~~-~~~~ 115 (243)
.+.|++|+|-|+|.+|..+|+.|...|++|+. .|.+. +.+.. ....+.+.. +.++
T Consensus 28 ~l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~~g~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (242)
T d1v9la1 28 GIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDA 107 (242)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecccccccccccccHHHHHHHhhcchhhHHHhhhhccCceEeeCcch
Confidence 68999999999999999999999999999875 44331 11111 011222222 2333
Q ss_pred hh-cCCcEEEEccCChhcccHHHHccCCCCeEEEE
Q 037949 116 VV-SEAGLFVTTTENADIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 116 ~~-~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvn 149 (243)
.+ ..+||++.|+.. ..++.+..+.++ +.+|.
T Consensus 108 i~~~~~DIliPcA~~-~~I~~~~a~~i~--ak~Iv 139 (242)
T d1v9la1 108 IFKLDVDIFVPAAIE-NVIRGDNAGLVK--ARLVV 139 (242)
T ss_dssp GGGCCCSEEEECSCS-SCBCTTTTTTCC--CSEEE
T ss_pred hccccccEEeecchh-ccccHHHHHhcc--cCEEE
Confidence 33 379999999643 356666666664 44444
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.56 E-value=0.0001 Score=56.14 Aligned_cols=67 Identities=27% Similarity=0.283 Sum_probs=47.7
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHH-Hhh--cC-----Ccc---cCHHhhhcCCcEEEEccCC
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQ-ALT--EG-----IPV---LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~-a~~--~G-----~~~---~~~~~~~~~aDvvi~a~G~ 129 (243)
.+++|.|+|+|.||..+|..+...|. +++.+|+++.++.. +.+ ++ ..+ ....+.++++|+|+.+.|.
T Consensus 5 ~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvitag~ 84 (148)
T d1ldna1 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGA 84 (148)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSC
T ss_pred CCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEEeccc
Confidence 57899999999999999999998885 79999999876421 111 11 111 1123456789999888764
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.55 E-value=6.1e-05 Score=58.81 Aligned_cols=103 Identities=13% Similarity=0.034 Sum_probs=65.2
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----cCCc------ccCHHhhhc
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----EGIP------VLTREDVVS 118 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----~G~~------~~~~~~~~~ 118 (243)
+..++.+.. ..++||+|+|+|+|+.+++++..|...| +|.++.+++.+.+.-.. .... ..+......
T Consensus 5 ~~~~l~~~~-~~~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (177)
T d1nvta1 5 ARMALEEEI-GRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLD 82 (177)
T ss_dssp HHHHHHHHH-CCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCT
T ss_pred HHHHHHHhC-CCcCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccc
Confidence 445554432 2579999999999999999999998776 99999999887543221 1111 112233345
Q ss_pred CCcEEEEccCCh--hcccH---HHHccCCCCeEEEEecCCC
Q 037949 119 EAGLFVTTTENA--DIIMV---RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 119 ~aDvvi~a~G~~--~~i~~---~~l~~l~~g~~vvnvg~~~ 154 (243)
.+|+++.||... +..+. -.+..++++.++..+-..+
T Consensus 83 ~~dliIn~tp~g~~~~~~~~~~~~~~~~~~~~~v~D~~y~p 123 (177)
T d1nvta1 83 GVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNP 123 (177)
T ss_dssp TCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSS
T ss_pred hhhhhccCCcccccccccccchhhhhccCcccceeeecCCc
Confidence 789999997431 11110 1134556777777766544
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.52 E-value=3.4e-05 Score=59.93 Aligned_cols=36 Identities=19% Similarity=0.150 Sum_probs=32.8
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~ 98 (243)
.+|+|+|||+|+.|+.+|..|+..|+ +|+++|.++.
T Consensus 3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 36899999999999999999999999 5999998765
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.52 E-value=3e-05 Score=66.42 Aligned_cols=36 Identities=19% Similarity=0.213 Sum_probs=32.5
Q ss_pred CcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 64 GKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 64 g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+|.++|+|+| +||+++|+.|...||+|++++.++..
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~ 40 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVY 40 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhh
Confidence 6899999976 79999999999999999999887654
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.52 E-value=7.2e-05 Score=56.99 Aligned_cols=68 Identities=21% Similarity=0.137 Sum_probs=46.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHH-Hhh-------cCCcc--cCHHhhhcCCcEEEEccCCh
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQ-ALT-------EGIPV--LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~-a~~-------~G~~~--~~~~~~~~~aDvvi~a~G~~ 130 (243)
..++|.|+|+|.+|..+|..+...|. +|+++|+++.++.. +.+ .+... ..-.+.+++||+|+.++|.+
T Consensus 4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~adivvitag~~ 83 (146)
T d1ez4a1 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAP 83 (146)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccccEEEEecccc
Confidence 35789999999999999999998884 89999999876421 111 11110 11123457899998887753
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=97.52 E-value=4.6e-05 Score=61.26 Aligned_cols=34 Identities=29% Similarity=0.195 Sum_probs=32.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
||+|+|||+|+-|+.+|..|+..|.+|+++|.++
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 6999999999999999999999999999999765
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.48 E-value=0.00017 Score=54.80 Aligned_cols=66 Identities=17% Similarity=0.138 Sum_probs=47.1
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHH-Hhh-------cCCcc---cCHHhhhcCCcEEEEccCCh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQ-ALT-------EGIPV---LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~-a~~-------~G~~~---~~~~~~~~~aDvvi~a~G~~ 130 (243)
|+|.|+|+|.||..+|..+...|. +++.+|+++.++.. +.+ ..... .+..+.++++|+|+.+.|.+
T Consensus 2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVitaG~~ 80 (146)
T d1hyha1 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNI 80 (146)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSCG
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEEecccc
Confidence 789999999999999999998885 89999999886421 111 11111 11234567899999887753
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.46 E-value=0.00066 Score=55.46 Aligned_cols=85 Identities=18% Similarity=0.282 Sum_probs=57.0
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHH-hCCCEEEEE-eC----------CchhHHHHhh-cC-------CcccCHHhhhc
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALK-AVGARVMGT-EI----------DLICALQALT-EG-------IPVLTREDVVS 118 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~-~~Ga~V~v~-d~----------~~~r~~~a~~-~G-------~~~~~~~~~~~ 118 (243)
+..+.|++|+|-|+|.+|..+|+.|. ..|++|+.+ |. |...+..... .+ .+..+.++.+.
T Consensus 26 ~~~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (234)
T d1b26a1 26 GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE 105 (234)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEETTEEEECTTCCCHHHHHHHHHHSSCSTTCSSCEEECHHHHHT
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeecCCCcEEeccccchHHHHHHHHhhcceeccccceeeccccccc
Confidence 34689999999999999999999984 689987764 32 2222222221 11 12234455543
Q ss_pred -CCcEEEEccCChhcccHHHHccCCCC
Q 037949 119 -EAGLFVTTTENADIIMVRHMKQMKNA 144 (243)
Q Consensus 119 -~aDvvi~a~G~~~~i~~~~l~~l~~g 144 (243)
++||++.|. ....|+.+..+.++..
T Consensus 106 ~~~DI~~PcA-~~~~I~~~~a~~l~~~ 131 (234)
T d1b26a1 106 LDVDILVPAA-LEGAIHAGNAERIKAK 131 (234)
T ss_dssp SCCSEEEECS-CTTCBCHHHHTTCCCS
T ss_pred cccceeecch-hcccccHHHHHHhhhc
Confidence 899999995 4457888888887644
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.44 E-value=0.00023 Score=55.53 Aligned_cols=88 Identities=19% Similarity=0.087 Sum_probs=57.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC-CEE-EEEeCCchhH-HHHhhcCCccc-------------------CHHhhhcCCcE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG-ARV-MGTEIDLICA-LQALTEGIPVL-------------------TREDVVSEAGL 122 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G-a~V-~v~d~~~~r~-~~a~~~G~~~~-------------------~~~~~~~~aDv 122 (243)
.+|+|.|+|.||+.+++.+.... .+| .+.|+++... ..+...+++.. +..+...++|+
T Consensus 3 irIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDv 82 (172)
T d2czca2 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (172)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred EEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCE
Confidence 47999999999999999998765 454 4568776532 22334444310 01233458999
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|+||||....... .-..++.|+..|..|..
T Consensus 83 ViEcTG~f~~~~~-~~~hl~~G~k~Vi~s~~ 112 (172)
T d2czca2 83 IVDATPGGIGAKN-KPLYEKAGVKAIFQGGE 112 (172)
T ss_dssp EEECCSTTHHHHH-HHHHHHHTCEEEECTTS
T ss_pred EEECCCCCCCHHH-HHHHHHcCCCEEEECCC
Confidence 9999997654332 23344568888876664
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.42 E-value=9.6e-05 Score=60.64 Aligned_cols=42 Identities=21% Similarity=0.230 Sum_probs=36.9
Q ss_pred cccCcEEEEEcC-C--hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGH-G--DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~-G--~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.++||+++|+|+ | +||+++|+.|...|++|++++++..++..
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~ 47 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ 47 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH
Confidence 478999999996 4 49999999999999999999999877543
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.41 E-value=0.00037 Score=58.84 Aligned_cols=81 Identities=15% Similarity=0.189 Sum_probs=53.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEE-e----------CCchhHHHHhhcCCc-------ccCHHhhh-cCCc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGT-E----------IDLICALQALTEGIP-------VLTREDVV-SEAG 121 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~-d----------~~~~r~~~a~~~G~~-------~~~~~~~~-~~aD 121 (243)
.+.|++|+|-|+|.+|..+|+.|...|++|+.+ | .|...+.......-. ..+.++.+ ..+|
T Consensus 33 ~L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD~~G~i~~~~Gld~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 112 (293)
T d1hwxa1 33 GFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCD 112 (293)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEECCTTCCCHHHHHHHHHTTSSSTTCTTSCBCCSCGGGCCCS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEccchhhccccccchHHHHHHHHHcCCeecccccccCCcccccCCcc
Confidence 578999999999999999999999999997764 4 233333332221111 11122333 3799
Q ss_pred EEEEccCChhcccHHHHccCC
Q 037949 122 LFVTTTENADIIMVRHMKQMK 142 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~ 142 (243)
|++.|+ ....|+.+..+.++
T Consensus 113 IliPaA-~~~~I~~~~a~~l~ 132 (293)
T d1hwxa1 113 ILIPAA-SEKQLTKSNAPRVK 132 (293)
T ss_dssp EEEECS-SSSCBCTTTGGGCC
T ss_pred EEeecc-ccccccHHHHHHHh
Confidence 999995 33456666666663
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=97.40 E-value=0.00011 Score=60.60 Aligned_cols=38 Identities=21% Similarity=0.184 Sum_probs=34.4
Q ss_pred cccCcEEEEEcC-C--hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGH-G--DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~-G--~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++||+++|+|+ | +||+++|+.|...|++|+++++++.
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~ 42 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 42 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 378999999997 4 6999999999999999999999865
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.39 E-value=0.00011 Score=56.27 Aligned_cols=69 Identities=14% Similarity=0.022 Sum_probs=49.5
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHH-hh-------cCCcc-----cCHHhhhcCCcEEEEcc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQA-LT-------EGIPV-----LTREDVVSEAGLFVTTT 127 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a-~~-------~G~~~-----~~~~~~~~~aDvvi~a~ 127 (243)
.+-+++.|+|+|.+|..+|..+...+. +++++|.++.++... .+ .+... .+.++.++++|+|+.+.
T Consensus 5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvita 84 (154)
T d1pzga1 5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA 84 (154)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEec
Confidence 356899999999999999998888885 999999998764221 11 11111 12356678999999987
Q ss_pred CCh
Q 037949 128 ENA 130 (243)
Q Consensus 128 G~~ 130 (243)
|.+
T Consensus 85 g~~ 87 (154)
T d1pzga1 85 GLT 87 (154)
T ss_dssp SCS
T ss_pred ccc
Confidence 653
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.38 E-value=0.0001 Score=54.14 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=32.2
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
++++|+|+|.||..+|..+..+|++|+++++++.
T Consensus 24 ~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~~ 57 (122)
T d1v59a2 24 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 57 (122)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCchHHHHHHHHHhhCcceeEEEeccc
Confidence 7999999999999999999999999999988775
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=97.37 E-value=0.00011 Score=57.92 Aligned_cols=37 Identities=22% Similarity=0.139 Sum_probs=34.5
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
...|+|+|||+||.|+.+|..|+..|.+|+++|.++.
T Consensus 41 ~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 41 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCcEEEEECccHHHHHHHHHHHhhccceEEEeccCc
Confidence 4679999999999999999999999999999998764
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.37 E-value=0.00011 Score=49.92 Aligned_cols=47 Identities=21% Similarity=0.143 Sum_probs=41.2
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEG 107 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G 107 (243)
..+|++|+|.|+ |.+|....+.++.+|++|+++..++++.+..+++|
T Consensus 29 ~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lG 76 (77)
T d1o8ca2 29 RPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLG 76 (77)
T ss_dssp CGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHT
T ss_pred ccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCC
Confidence 357899999997 69999999999999999999999988877776665
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.35 E-value=0.00013 Score=52.96 Aligned_cols=35 Identities=26% Similarity=0.131 Sum_probs=32.8
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++++|+|+|.||..+|..+..+|.+|+++++.+.
T Consensus 22 p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCccceeeeeeecccccEEEEEEecce
Confidence 48999999999999999999999999999998775
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.35 E-value=0.00015 Score=55.40 Aligned_cols=38 Identities=21% Similarity=0.220 Sum_probs=33.6
Q ss_pred EEEEE-cCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH
Q 037949 66 IAVDC-GHGDVGRGCAAALKAVGARVMGTEIDLICALQA 103 (243)
Q Consensus 66 ~vlVi-G~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a 103 (243)
++.|+ |+|.||..+|+.|...|++|++++++++++...
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l 40 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK 40 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 57888 789999999999999999999999999876443
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.00029 Score=53.21 Aligned_cols=67 Identities=15% Similarity=0.139 Sum_probs=49.4
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhH----HHHhhcCCccc-----CH---Hh-hhcCCcEEEEccCChh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICA----LQALTEGIPVL-----TR---ED-VVSEAGLFVTTTENAD 131 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~----~~a~~~G~~~~-----~~---~~-~~~~aDvvi~a~G~~~ 131 (243)
..++|+|+|.+|..+++.|...|.+|+++|.++.+. ......|+.++ +. .+ -+..||.++.++++..
T Consensus 4 nHiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d~ 83 (153)
T d1id1a_ 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDA 83 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccHH
Confidence 469999999999999999999999999999988642 22223465432 21 22 2468999999887643
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.33 E-value=0.00043 Score=54.29 Aligned_cols=88 Identities=18% Similarity=0.133 Sum_probs=54.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCC-CEEEE-EeCCchhHHHH-hhcCCcc------------------cCHHhhhcCCcEEE
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG-ARVMG-TEIDLICALQA-LTEGIPV------------------LTREDVVSEAGLFV 124 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G-a~V~v-~d~~~~r~~~a-~~~G~~~------------------~~~~~~~~~aDvvi 124 (243)
+|+|.|+|.||+.+++.+.... .+|+. .|+++...... ...+... .+..+...++|+|+
T Consensus 3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiVi 82 (178)
T d1b7go1 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (178)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEEE
Confidence 6999999999999999999765 46544 67776543222 2222111 01233446899999
Q ss_pred EccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 125 TTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 125 ~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
||||.....+. .-..++.|..++..|..+
T Consensus 83 ecTG~f~~~e~-a~~hl~~G~KvIi~~~~~ 111 (178)
T d1b7go1 83 DTTPNGVGAQY-KPIYLQLQRNAIFQGGEK 111 (178)
T ss_dssp ECCSTTHHHHH-HHHHHHTTCEEEECTTSC
T ss_pred ECCCCcCCHHH-HHHHHHcCCEEEEECCCC
Confidence 99997433221 222335566777665543
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.33 E-value=0.00015 Score=53.19 Aligned_cols=37 Identities=24% Similarity=0.173 Sum_probs=34.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
..+++|+|+|+|++|..+|..++.+|.+|+++++.+.
T Consensus 28 ~~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 28 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCCEEEEECChHHHHHHHHHhhccceEEEEEEecCc
Confidence 3578999999999999999999999999999998764
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.33 E-value=0.00071 Score=55.45 Aligned_cols=86 Identities=19% Similarity=0.276 Sum_probs=55.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHH-hCCCEEEE-EeCCc----------hhHHHHhh-c-------CCcccCHHhhh-cC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALK-AVGARVMG-TEIDL----------ICALQALT-E-------GIPVLTREDVV-SE 119 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~-~~Ga~V~v-~d~~~----------~r~~~a~~-~-------G~~~~~~~~~~-~~ 119 (243)
.++|++|+|-|+|.+|..+|+.|. ..|++|+. .|.+. ..+..... . +...++.++.+ .+
T Consensus 29 ~l~g~~v~IqGfGnVG~~~a~~L~~~~G~kvv~vsD~~g~i~~~~G~d~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 108 (239)
T d1gtma1 29 TLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWKNEHGSVKDFPGATNITNEELLELE 108 (239)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEEEECHHHHHHHHHHHSSSTTCTTSEEECHHHHHHSC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHhcCcceeeccccccceecCCcCCHHHHHHHHHhccccccCCCCeeeccccccccc
Confidence 489999999999999999999885 57998654 45431 12211111 1 12234455554 48
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvn 149 (243)
+||++.|+. ...|+.+..+.+ .+.+|.
T Consensus 109 ~DIl~PcA~-~~~I~~~~a~~i--~ak~I~ 135 (239)
T d1gtma1 109 VDVLAPAAI-EEVITKKNADNI--KAKIVA 135 (239)
T ss_dssp CSEEEECSC-SCCBCTTGGGGC--CCSEEE
T ss_pred ccEEeeccc-cccccHHHHHhc--cccEEE
Confidence 999999964 355666666766 344443
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=97.32 E-value=0.00013 Score=52.89 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=32.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
-++++|+|+|++|..+|..++.+|.+|+++++.+.
T Consensus 21 p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEECCChhhHHHHHHhhccccEEEEEeecch
Confidence 37899999999999999999999999999998764
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=97.30 E-value=0.00017 Score=52.38 Aligned_cols=37 Identities=16% Similarity=0.086 Sum_probs=34.4
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++++++|+|+|.||..+|..++.+|.+|.++++.+.
T Consensus 20 ~~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 20 EPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcchhheEeeccch
Confidence 4689999999999999999999999999999988764
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.30 E-value=0.00013 Score=60.72 Aligned_cols=40 Identities=28% Similarity=0.276 Sum_probs=35.7
Q ss_pred ccccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 60 ITIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 60 ~~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+.++||+++|+|++ +||+++|+.|...|++|+++++++..
T Consensus 4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~ 46 (297)
T d1d7oa_ 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL 46 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence 45899999999986 69999999999999999999887654
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.29 E-value=0.00037 Score=54.79 Aligned_cols=63 Identities=21% Similarity=0.236 Sum_probs=45.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-c-------------------cCHHhhhcCCcEEEE
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-V-------------------LTREDVVSEAGLFVT 125 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~-------------------~~~~~~~~~aDvvi~ 125 (243)
+|.|+|.|-+|+.+|..+ +.|.+|+.+|.|+.+... ...|.. . .+......++|+++.
T Consensus 2 kI~ViGlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~-l~~g~~p~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~ii~v 79 (196)
T d1dlja2 2 KIAVAGSGYVGLSLGVLL-SLQNEVTIVDILPSKVDK-INNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (196)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTSEEEEECSCHHHHHH-HHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred EEEEECCChhHHHHHHHH-HCCCcEEEEECCHHHHHH-HhhcccccchhhHHHHhhhhhhhhhccchhhhhhhccccccc
Confidence 589999999999999877 579999999999987643 233321 1 112233457999999
Q ss_pred ccCCh
Q 037949 126 TTENA 130 (243)
Q Consensus 126 a~G~~ 130 (243)
|++++
T Consensus 80 ~vpt~ 84 (196)
T d1dlja2 80 ATPTN 84 (196)
T ss_dssp CCCCC
T ss_pred cCCcc
Confidence 97653
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=97.28 E-value=0.00012 Score=55.42 Aligned_cols=36 Identities=28% Similarity=0.238 Sum_probs=32.3
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~ 98 (243)
+||+|+|+|+|++|..+|..|+..|. +|+++|.++.
T Consensus 1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~~ 38 (186)
T d1fcda1 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNTD 38 (186)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSC
T ss_pred CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCCc
Confidence 58999999999999999999999884 8999988763
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.28 E-value=0.00023 Score=53.59 Aligned_cols=64 Identities=13% Similarity=0.007 Sum_probs=45.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHh-hc-------CC--cc--cCHHhhhcCCcEEEEccCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQAL-TE-------GI--PV--LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~-~~-------G~--~~--~~~~~~~~~aDvvi~a~G~ 129 (243)
+|.|+|+|.+|..++..+...|. ++..+|+++.++.... .. .. .+ .+..+.++++|+++.+.|.
T Consensus 2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvitag~ 79 (142)
T d1guza1 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGL 79 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEEEEec
Confidence 68999999999999999999885 8999999987653221 11 11 11 1223456788888888764
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=97.28 E-value=0.00018 Score=52.69 Aligned_cols=38 Identities=21% Similarity=0.140 Sum_probs=34.7
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.++++++|+|+|.+|..+|..++.+|.+|+++++++.-
T Consensus 28 ~~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 28 RPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 65 (121)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred hcCCeEEEECcchhHHHHHHHhhcccceEEEEeecccc
Confidence 35799999999999999999999999999999988753
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.27 E-value=0.00021 Score=55.23 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=48.2
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHH-HHhh--cCC-----cc---cCHHhhhcCCcEEEEccC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICAL-QALT--EGI-----PV---LTREDVVSEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~-~a~~--~G~-----~~---~~~~~~~~~aDvvi~a~G 128 (243)
.+..+|.|+|+|.+|..+|..+...|. +++++|+++.+.. ++.+ +.. .. ....+.++++|+|+.++|
T Consensus 18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVitAg 97 (160)
T d1i0za1 18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAG 97 (160)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEECCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEEecC
Confidence 567899999999999999999999997 8999999987641 2221 111 10 011344678888888766
Q ss_pred C
Q 037949 129 N 129 (243)
Q Consensus 129 ~ 129 (243)
.
T Consensus 98 ~ 98 (160)
T d1i0za1 98 V 98 (160)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=97.26 E-value=0.00017 Score=52.61 Aligned_cols=35 Identities=14% Similarity=-0.005 Sum_probs=32.5
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++++|+|+|.||..+|..++.+|.+|+++++.+.
T Consensus 22 p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEECCchHHHHHHHHHHhccccceeeehhcc
Confidence 48999999999999999999999999999998664
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.25 E-value=0.00074 Score=51.01 Aligned_cols=64 Identities=17% Similarity=0.107 Sum_probs=47.0
Q ss_pred cEEEEEcC-ChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCC-c-------cc---CHHhhhcCCcEEEEccCC
Q 037949 65 KIAVDCGH-GDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGI-P-------VL---TREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 65 ~~vlViG~-G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~-~-------~~---~~~~~~~~aDvvi~a~G~ 129 (243)
.+|.|+|+ |.||..+|..+...|. +++++|+++.+. ++.+.-. . .+ +..+.++++|+|+-+.|.
T Consensus 1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~-~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~ 78 (144)
T d1mlda1 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG-VAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV 78 (144)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH-HHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccch-hhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCc
Confidence 37999996 9999999999999986 789999987653 3443221 0 11 234567899999988774
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.24 E-value=0.00013 Score=53.57 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=31.1
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
-++++|+|+|.||..+|..++.+|.+|+++++++
T Consensus 20 P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~~ 53 (122)
T d1h6va2 20 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI 53 (122)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCeEEEECCCccHHHHHHHHhhcCCeEEEEEech
Confidence 3789999999999999999999999999998753
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.24 E-value=0.0003 Score=53.63 Aligned_cols=66 Identities=20% Similarity=0.064 Sum_probs=47.5
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHH-Hhhc-------CCc--c--cCHHhhhcCCcEEEEccCC
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQ-ALTE-------GIP--V--LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~-a~~~-------G~~--~--~~~~~~~~~aDvvi~a~G~ 129 (243)
..+|.|+|+|.+|..+|..+...+. ++.++|+++.+... +.+. +.. + .+..+.++++|+|+.+.|.
T Consensus 3 ~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~ 81 (150)
T d1t2da1 3 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGF 81 (150)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEeccc
Confidence 4689999999999999999988887 89999998876421 1111 111 1 1224556789999988774
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=97.23 E-value=0.00017 Score=57.50 Aligned_cols=35 Identities=31% Similarity=0.255 Sum_probs=32.0
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.-++|+|||+|..|+.+|..|+..|.+|+++|+++
T Consensus 5 ~~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEECccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 34789999999999999999999999999999864
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.23 E-value=0.00019 Score=54.18 Aligned_cols=65 Identities=22% Similarity=0.092 Sum_probs=45.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHH-Hhhc--C-----Cc--cc--CHHhhhcCCcEEEEccCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQ-ALTE--G-----IP--VL--TREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~-a~~~--G-----~~--~~--~~~~~~~~aDvvi~a~G~ 129 (243)
++|.|+|+|.+|..+|..+...+. +++.+|+++.+... +.+. . .. +. +-.+.++++|+++.++|.
T Consensus 2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvitag~ 79 (142)
T d1uxja1 2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGA 79 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEEeeec
Confidence 589999999999999999888886 99999998876422 2211 1 11 11 112345789999888775
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=97.23 E-value=0.00066 Score=52.80 Aligned_cols=88 Identities=18% Similarity=0.154 Sum_probs=55.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC-EEE-EEeCCchhH-HHHhhcCCcc-cC------------------HHhhhcCCcE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA-RVM-GTEIDLICA-LQALTEGIPV-LT------------------REDVVSEAGL 122 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga-~V~-v~d~~~~r~-~~a~~~G~~~-~~------------------~~~~~~~aDv 122 (243)
++|+|-|+|.||+.+++.+...+- +|+ +.|+++... ..+...+++. .. ..++.+++|+
T Consensus 2 ~~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv 81 (171)
T d1cf2o1 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (171)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence 579999999999999999987774 554 467765432 2233334321 00 1233468999
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|+||||...... ..-..++.|..++..+..
T Consensus 82 ViEcTG~f~~~~-~~~~hl~~G~K~vi~~~~ 111 (171)
T d1cf2o1 82 VIDCTPEGIGAK-NLKMYKEKGIKAIFQGGE 111 (171)
T ss_dssp EEECCSTTHHHH-HHHHHHHTTCEEEECTTS
T ss_pred EEEccCCCCCHH-HHHHHHHcCCCEEEECCC
Confidence 999999754332 122334557778776654
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.21 E-value=0.00035 Score=52.85 Aligned_cols=65 Identities=20% Similarity=0.215 Sum_probs=45.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHH-Hhh--cCCc------c--cCHHhhhcCCcEEEEccCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQ-ALT--EGIP------V--LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~-a~~--~G~~------~--~~~~~~~~~aDvvi~a~G~ 129 (243)
.+|.|||+|.+|..+|..+...|. +++++|+++.++.. +.+ +... + .+..+.++++|+|+.+.|.
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVitaG~ 79 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGP 79 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEEeccc
Confidence 469999999999999999998886 89999999876421 111 1110 1 1112446789999888775
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.21 E-value=0.00024 Score=53.47 Aligned_cols=64 Identities=19% Similarity=0.141 Sum_probs=44.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHh-h--cCCc-------ccCHHhhhcCCcEEEEccCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQAL-T--EGIP-------VLTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~-~--~G~~-------~~~~~~~~~~aDvvi~a~G~ 129 (243)
++.|+|+|.+|..+|..+...|. ++..+|+++.++.... + .+.. ..+..+.++++|+|+.+.|.
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~ 77 (140)
T d1a5za1 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGV 77 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEEeccc
Confidence 68999999999999998887775 8999999987652211 1 1110 01123456788888888764
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00021 Score=52.51 Aligned_cols=34 Identities=21% Similarity=0.103 Sum_probs=32.1
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
|+++|+|+|.||..+|..++.+|.+|+++++++.
T Consensus 23 k~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 23 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEEcCCccHHHHHHHHhcCCcEEEEEeeccc
Confidence 8999999999999999999999999999998764
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=97.20 E-value=0.00023 Score=51.86 Aligned_cols=35 Identities=20% Similarity=0.045 Sum_probs=32.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++++|+|+|.||..+|..++.+|++|++++.++.
T Consensus 22 p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 22 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHcCCceEEEEeecc
Confidence 48899999999999999999999999999987664
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.16 E-value=0.00032 Score=55.42 Aligned_cols=69 Identities=16% Similarity=0.046 Sum_probs=52.6
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc--------CCc-------ccCHHhhhcCCcEEEEcc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE--------GIP-------VLTREDVVSEAGLFVTTT 127 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~--------G~~-------~~~~~~~~~~aDvvi~a~ 127 (243)
.-+++.|+|+|..|.++|..|...|.+|.+++++++....-... ++. ..+++++++++|+++.|+
T Consensus 6 ~m~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiav 85 (189)
T d1n1ea2 6 YLNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI 85 (189)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECS
T ss_pred eeceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEEEcC
Confidence 44689999999999999999999999999999998765432211 111 123577888999999998
Q ss_pred CChh
Q 037949 128 ENAD 131 (243)
Q Consensus 128 G~~~ 131 (243)
.+..
T Consensus 86 Ps~~ 89 (189)
T d1n1ea2 86 PTQF 89 (189)
T ss_dssp CHHH
T ss_pred cHHH
Confidence 6543
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=97.14 E-value=0.00021 Score=57.52 Aligned_cols=36 Identities=19% Similarity=0.046 Sum_probs=32.8
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
..++|+|||+|+.|+.+|..|+..|.+|+++|.++.
T Consensus 3 ~~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 357899999999999999999999999999998654
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=97.13 E-value=0.00028 Score=57.50 Aligned_cols=40 Identities=23% Similarity=0.189 Sum_probs=35.4
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.++||+++|+|++ +||.++|+.|...|++|+++++++...
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~ 44 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK 44 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTH
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 3789999999976 599999999999999999999987644
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=97.12 E-value=0.00022 Score=51.56 Aligned_cols=35 Identities=26% Similarity=0.229 Sum_probs=32.6
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++++|+|+|++|..+|..++.+|.+|+++++.+.
T Consensus 21 p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHhhcccceEEEeeecc
Confidence 38999999999999999999999999999988764
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=97.11 E-value=0.00028 Score=51.56 Aligned_cols=36 Identities=22% Similarity=0.160 Sum_probs=33.2
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.+++++|+|+|.+|..+|..++.+|.+|+++++++.
T Consensus 31 ~~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 31 NSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred cCCcEEEECCcHHHHHHHHHhhcccceEEEEecccc
Confidence 458999999999999999999999999999998764
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=97.09 E-value=0.00034 Score=52.00 Aligned_cols=38 Identities=24% Similarity=0.144 Sum_probs=34.7
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
..+++++|+|+|.+|..+|..++..|.+|.+++..+..
T Consensus 33 ~~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 33 IADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARV 70 (133)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred ccCCEEEEECCchHHHHHHHHHHhhCcceeeeeecccc
Confidence 45799999999999999999999999999999987753
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.08 E-value=0.00024 Score=57.09 Aligned_cols=36 Identities=33% Similarity=0.370 Sum_probs=33.2
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+|+++|+|++ +||+++|+.|...|++|+++|++++.
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~ 37 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG 37 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence 5899999987 99999999999999999999998764
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=97.07 E-value=0.00042 Score=57.38 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=60.4
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEE-EeCC----------chhHHHHhh----------------cCCccc
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMG-TEID----------LICALQALT----------------EGIPVL 111 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v-~d~~----------~~r~~~a~~----------------~G~~~~ 111 (243)
+..+.|++|+|-|+|.+|..+|+.|...|++|+. .|.+ ...+..... .+.+.+
T Consensus 31 ~~~l~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (255)
T d1bgva1 31 NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFF 110 (255)
T ss_dssp TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCceEecCCCCCHHHHHHHHHHHhhhcCcchhhhhhhcCceee
Confidence 4468999999999999999999999999998764 4532 222211100 011111
Q ss_pred CHHhhh-cCCcEEEEccCChhcccHHHHccC-CCCeEEEEecCCCCCCChh
Q 037949 112 TREDVV-SEAGLFVTTTENADIIMVRHMKQM-KNAAIVCNIGHFDNEIDML 160 (243)
Q Consensus 112 ~~~~~~-~~aDvvi~a~G~~~~i~~~~l~~l-~~g~~vvnvg~~~~~id~~ 160 (243)
+.++.+ .++||++.|. ....|+.+..+.+ .+++.+|.-|-. .++..+
T Consensus 111 ~~~~~~~~~~DiliPcA-~~~~I~~~~a~~l~a~~ck~I~EgAN-~p~t~e 159 (255)
T d1bgva1 111 PGEKPWGQKVDIIMPCA-TQNDVDLEQAKKIVANNVKYYIEVAN-MPTTNE 159 (255)
T ss_dssp ETCCGGGSCCSEEECCS-CTTCBCHHHHHHHHHTTCCEEECCSS-SCBCHH
T ss_pred chhhcccccccEEeecc-ccccccHHHHHhhhhcCceEEecCCC-CCcchH
Confidence 222222 3799999885 3345666555555 346666654433 234443
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.07 E-value=0.0004 Score=52.39 Aligned_cols=65 Identities=18% Similarity=0.178 Sum_probs=43.4
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhH-HHHhh--cCCcc------c-CHHhhhcCCcEEEEccCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICA-LQALT--EGIPV------L-TREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~-~~a~~--~G~~~------~-~~~~~~~~aDvvi~a~G~ 129 (243)
++|.|+|+|.||..+|..+...|. +++++|+++.++ .++.+ ++... . ...+.++++|+|+.+.|.
T Consensus 2 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~ 78 (142)
T d1y6ja1 2 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGA 78 (142)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEEeccc
Confidence 479999999999999999998886 899999988753 12322 12110 1 113346789988888664
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.07 E-value=0.00037 Score=51.16 Aligned_cols=64 Identities=20% Similarity=0.260 Sum_probs=48.2
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C---H---Hh-hhcCCcEEEEccCCh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T---R---ED-VVSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~---~---~~-~~~~aDvvi~a~G~~ 130 (243)
|.++|+|+|.+|+.+++.|+. .+|+++|.++.+.......|+.++ + . .+ -+..|+.++.++...
T Consensus 1 kHivI~G~g~~g~~l~~~L~~--~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d 73 (129)
T d2fy8a1 1 RHVVICGWSESTLECLRELRG--SEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLESD 73 (129)
T ss_dssp CCEEEESCCHHHHHHHHTSCG--GGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSH
T ss_pred CEEEEECCCHHHHHHHHHHcC--CCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEeccch
Confidence 568999999999999999964 457888999998777777776532 2 1 11 146799998887654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=97.04 E-value=0.00021 Score=52.46 Aligned_cols=36 Identities=22% Similarity=0.201 Sum_probs=33.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.++++|+|+|.||+.+|..+..+|++|++.++++..
T Consensus 25 p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 25 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEEccchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 489999999999999999999999999999887753
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=97.04 E-value=0.00034 Score=56.28 Aligned_cols=37 Identities=22% Similarity=0.136 Sum_probs=34.3
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
..+++|+|||+|+.|+.+|..|+..|.+|+++|.++.
T Consensus 47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEEcccHHHHHHHHHHHHhccceeeEeeccc
Confidence 4689999999999999999999999999999998764
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.03 E-value=0.0015 Score=50.73 Aligned_cols=82 Identities=16% Similarity=0.135 Sum_probs=53.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCC--chhHHHHhhcC------Cc--------ccCHHhhhcCCcEEEEccCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEID--LICALQALTEG------IP--------VLTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~--~~r~~~a~~~G------~~--------~~~~~~~~~~aDvvi~a~G~ 129 (243)
+|.|+|+|..|.++|..|...|.+|.++.++ ++....-.... .. ..+.+++++++|+|+.|+..
T Consensus 2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~avps 81 (180)
T d1txga2 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVST 81 (180)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSCG
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcccch
Confidence 6899999999999999999999999998764 32221111111 00 12345678899999999865
Q ss_pred hhc---ccHHHHccCCCCeEEE
Q 037949 130 ADI---IMVRHMKQMKNAAIVC 148 (243)
Q Consensus 130 ~~~---i~~~~l~~l~~g~~vv 148 (243)
... +. +....+++..+++
T Consensus 82 ~~~~~~~~-~l~~~l~~~~ii~ 102 (180)
T d1txga2 82 DGVLPVMS-RILPYLKDQYIVL 102 (180)
T ss_dssp GGHHHHHH-HHTTTCCSCEEEE
T ss_pred hhhHHHHH-hhccccccceecc
Confidence 432 32 2334455554444
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=97.01 E-value=0.00031 Score=51.76 Aligned_cols=36 Identities=17% Similarity=0.104 Sum_probs=33.1
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
..++++|+|+|.||..+|..++.+|.+|++++..+.
T Consensus 25 ~p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 25 VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 358999999999999999999999999999988764
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=97.00 E-value=0.00025 Score=58.04 Aligned_cols=36 Identities=28% Similarity=0.203 Sum_probs=32.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
..|+|+|||+|+.|+.+|..|+..|.+|+++|.++.
T Consensus 29 ~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~~ 64 (370)
T d2iida1 29 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASER 64 (370)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 458999999999999999999999999999998653
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.93 E-value=0.00078 Score=51.77 Aligned_cols=68 Identities=22% Similarity=0.266 Sum_probs=46.5
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHH-HHhhc-------CCcc-c--CHHhhhcCCcEEEEccC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICAL-QALTE-------GIPV-L--TREDVVSEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~-~a~~~-------G~~~-~--~~~~~~~~aDvvi~a~G 128 (243)
++-.+|.|+|+|.||..+|..+...|. +++++|.++.++. .+.+. +... . +-.+.+.++|+|+.+.|
T Consensus 17 ~~~~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvitag 96 (159)
T d2ldxa1 17 LSRCKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVIITAG 96 (159)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEECCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEEecc
Confidence 345689999999999999999999986 7999999987542 11111 1111 0 11234567888887766
Q ss_pred C
Q 037949 129 N 129 (243)
Q Consensus 129 ~ 129 (243)
.
T Consensus 97 ~ 97 (159)
T d2ldxa1 97 A 97 (159)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=96.80 E-value=0.00036 Score=54.16 Aligned_cols=36 Identities=11% Similarity=-0.096 Sum_probs=32.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+++.|+|||+||.|+.+|..++.+|++|+++|..+.
T Consensus 4 k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~~~ 39 (190)
T d1trba1 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEK 39 (190)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSST
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEEeecc
Confidence 578999999999999999999999999999986543
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.79 E-value=0.0016 Score=48.88 Aligned_cols=64 Identities=16% Similarity=0.048 Sum_probs=45.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHH-Hhh-------cCCc--cc--CHHhhhcCCcEEEEccCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQ-ALT-------EGIP--VL--TREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~-a~~-------~G~~--~~--~~~~~~~~aDvvi~a~G~ 129 (243)
++.|+|+|.+|..+|..+...|. +++++|+++.+... +.+ .... +. +-.+.++++|+|+.+.|.
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~adiVvitag~ 79 (142)
T d1ojua1 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGL 79 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCCC
T ss_pred EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccccEEEEeccc
Confidence 68999999999999999998885 79999999876421 111 1111 11 113467789999888763
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.78 E-value=0.0022 Score=52.09 Aligned_cols=42 Identities=19% Similarity=0.162 Sum_probs=35.4
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCC--EEEEEeCCchhHHHHh
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGA--RVMGTEIDLICALQAL 104 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~ 104 (243)
+.|+|+|+|+. +||+++|+.|...|+ +|+.+.++.+++.+..
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~ 46 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK 46 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH
Confidence 45999999988 999999999999997 6888888888765433
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=96.75 E-value=0.00067 Score=45.96 Aligned_cols=35 Identities=26% Similarity=0.255 Sum_probs=32.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
|+|+|+|.|-.|+.++..++.+|.+|++.|.++..
T Consensus 2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 78999999999999999999999999999987653
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.73 E-value=0.0014 Score=47.32 Aligned_cols=37 Identities=19% Similarity=0.291 Sum_probs=33.8
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.+|+|+|+|-.|+.++..++.+|.+|+++|.++..
T Consensus 10 ~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~ 46 (111)
T d1kjqa2 10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADA 46 (111)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTC
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCC
Confidence 4568999999999999999999999999999998764
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=96.72 E-value=0.00058 Score=52.10 Aligned_cols=35 Identities=26% Similarity=0.110 Sum_probs=30.1
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++++|+|+|+|++|..+|..++.+|.+|.++++++
T Consensus 2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEecC
Confidence 47899999999999999999999999776665444
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=96.70 E-value=0.0028 Score=44.37 Aligned_cols=68 Identities=18% Similarity=0.173 Sum_probs=48.8
Q ss_pred ccCcEEEEEcCChHHHHH-HHHHHhCCCEEEEEeCCchh-HHHHhhcCCccc--CHHhhhcCCcEEEEccCC
Q 037949 62 IAGKIAVDCGHGDVGRGC-AAALKAVGARVMGTEIDLIC-ALQALTEGIPVL--TREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~-A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~~~--~~~~~~~~aDvvi~a~G~ 129 (243)
...+++-++|-|++|+.. |+.|+..|.+|..+|..... .....+.|..+. ...+.+.++|+|+-.++.
T Consensus 6 ~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i~~~d~vV~S~AI 77 (96)
T d1p3da1 6 RRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAI 77 (96)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGGTTCSEEEECTTS
T ss_pred hhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccccCCCCCEEEECCCc
Confidence 457899999999999755 99999999999999986443 233345676542 123345678888766543
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=96.70 E-value=0.0035 Score=43.30 Aligned_cols=64 Identities=22% Similarity=0.236 Sum_probs=46.4
Q ss_pred cEEEEEcCChHHH-HHHHHHHhCCCEEEEEeCCchhH-HHHhhcCCcccC--HHhhhcCCcEEEEccC
Q 037949 65 KIAVDCGHGDVGR-GCAAALKAVGARVMGTEIDLICA-LQALTEGIPVLT--REDVVSEAGLFVTTTE 128 (243)
Q Consensus 65 ~~vlViG~G~IG~-~~A~~l~~~Ga~V~v~d~~~~r~-~~a~~~G~~~~~--~~~~~~~aDvvi~a~G 128 (243)
.++=++|-|++|+ ++|+.|+..|+.|..+|..+... ..-.+.|+.+.. ..+-+.++|+|+-.++
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i~~~d~vV~SsA 69 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNWYDPDLVIKTPA 69 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSCCCCSEEEECTT
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeecccccCCCCEEEEecC
Confidence 4678999999998 78999999999999999986543 233346765421 1233567898877654
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=96.69 E-value=0.00061 Score=52.84 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=29.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~ 97 (243)
+|+|||+|+-|+.+|..|+..|. +|+|+|.++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 49999999999999999999997 699999875
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=96.64 E-value=0.001 Score=53.70 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=31.3
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
|.|+|+|++ +||+++|+.|...|++|+++|+++.
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~ 36 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence 789999987 8999999999999999999998765
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.63 E-value=0.00053 Score=56.23 Aligned_cols=33 Identities=18% Similarity=0.036 Sum_probs=31.3
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+|+|+|+|+.|+.+|..|+..|.+|+++|.++.
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 599999999999999999999999999999875
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=96.63 E-value=0.00067 Score=54.20 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=30.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+|+|||+|+-|+.+|..|+..|.+|+++|.++.
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 34 (347)
T d2ivda1 2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESSAR 34 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 599999999999999999999999999998653
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=96.52 E-value=0.0041 Score=47.07 Aligned_cols=82 Identities=13% Similarity=0.068 Sum_probs=53.1
Q ss_pred EEEEEcCChHHHH-HHHHHHhC-CCEE-EEEeCCchhHHHHh-hcCCccc-CHHhhhcCCcEEEEccCChhcccHHHHcc
Q 037949 66 IAVDCGHGDVGRG-CAAALKAV-GARV-MGTEIDLICALQAL-TEGIPVL-TREDVVSEAGLFVTTTENADIIMVRHMKQ 140 (243)
Q Consensus 66 ~vlViG~G~IG~~-~A~~l~~~-Ga~V-~v~d~~~~r~~~a~-~~G~~~~-~~~~~~~~aDvvi~a~G~~~~i~~~~l~~ 140 (243)
+++|+|+|.+|.. .+..++.. +.++ .++|+++.+..... ..++... +.+++.++.|+|+.|+.+..-.. -....
T Consensus 3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~I~tp~~~h~~-~~~~a 81 (164)
T d1tlta1 3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFD-VVSTL 81 (164)
T ss_dssp EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHH-HHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccccccchhhhhhcccccccccchhccc-ccccc
Confidence 6899999999975 56666654 6665 46899988764433 4465533 46677788999999976542222 12334
Q ss_pred CCCCeEEE
Q 037949 141 MKNAAIVC 148 (243)
Q Consensus 141 l~~g~~vv 148 (243)
++.|--|.
T Consensus 82 l~~gk~V~ 89 (164)
T d1tlta1 82 LNAGVHVC 89 (164)
T ss_dssp HHTTCEEE
T ss_pred ccccceee
Confidence 45554444
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=96.52 E-value=0.0016 Score=49.98 Aligned_cols=81 Identities=10% Similarity=0.044 Sum_probs=53.4
Q ss_pred cEEEEEcCChHHHHHHHHHHhC-CCEE-EEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccHHHHccC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAV-GARV-MGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMVRHMKQM 141 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~-Ga~V-~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l 141 (243)
-+|+|+|+|.||+..+..++.. ++++ .++|+++.+. ...+.. ..+..+...+.|+|+.|+++..-.. -....+
T Consensus 4 irvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~---~~~~~~~~~~~~~~~~~~D~Vvi~tp~~~h~~-~a~~aL 79 (170)
T d1f06a1 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD---TKTPVFDVADVDKHADDVDVLFLCMGSATDIP-EQAPKF 79 (170)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS---SSSCEEEGGGGGGTTTTCSEEEECSCTTTHHH-HHHHHH
T ss_pred ceEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc---cccccccchhhhhhccccceEEEeCCCcccHH-HHHHHH
Confidence 3699999999999999999875 4564 4578877542 111221 2234445568999999987653332 345556
Q ss_pred CCCeEEEE
Q 037949 142 KNAAIVCN 149 (243)
Q Consensus 142 ~~g~~vvn 149 (243)
+.|..++.
T Consensus 80 ~aG~~vv~ 87 (170)
T d1f06a1 80 AQFACTVD 87 (170)
T ss_dssp TTTSEEEC
T ss_pred HCCCcEEE
Confidence 77776663
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=96.49 E-value=0.0056 Score=46.56 Aligned_cols=89 Identities=13% Similarity=0.157 Sum_probs=57.8
Q ss_pred cEEEEEcCChHHHH-HHHHHHhCCC-EE-EEEeCCchh--HHHHhhcCCcccC--HHhh-----hcCCcEEEEccCCh-h
Q 037949 65 KIAVDCGHGDVGRG-CAAALKAVGA-RV-MGTEIDLIC--ALQALTEGIPVLT--REDV-----VSEAGLFVTTTENA-D 131 (243)
Q Consensus 65 ~~vlViG~G~IG~~-~A~~l~~~Ga-~V-~v~d~~~~r--~~~a~~~G~~~~~--~~~~-----~~~aDvvi~a~G~~-~ 131 (243)
-+++|+|+|.||.. +.+.++.... ++ .++++++.. ...+...|..+.. .++. ..+.|+||.||.+. +
T Consensus 5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~d~l~~~~~~~~iDiVf~ATpag~h 84 (157)
T d1nvmb1 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAH 84 (157)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHHH
T ss_pred cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccceeeeeecccccccCEEEEcCCchhH
Confidence 37999999999985 6778876654 65 446877643 3456667765322 2222 34789999998653 2
Q ss_pred cccHHHHccCCCCeEEEEecCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.-....+..++.|..|++-+..
T Consensus 85 ~~~~~~~~aa~~G~~VID~s~a 106 (157)
T d1nvmb1 85 VQNEALLRQAKPGIRLIDLTPA 106 (157)
T ss_dssp HHHHHHHHHHCTTCEEEECSTT
T ss_pred HHhHHHHHHHHcCCEEEEcccc
Confidence 2222346667889999876653
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.46 E-value=0.0014 Score=51.48 Aligned_cols=32 Identities=16% Similarity=0.089 Sum_probs=29.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.|+|||+||.|+.+|..++.+|.+|.++|.++
T Consensus 4 DvvVIG~G~aG~~aA~~a~~~G~kV~iiE~~~ 35 (217)
T d1gesa1 4 DYIAIGGGSGGIASINRAAMYGQKCALIEAKE 35 (217)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEeccC
Confidence 48999999999999999999999999999764
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.46 E-value=0.0061 Score=45.77 Aligned_cols=33 Identities=18% Similarity=0.066 Sum_probs=29.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHhCCC--EEEEEeCCch
Q 037949 66 IAVDCGH-GDVGRGCAAALKAVGA--RVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~-G~IG~~~A~~l~~~Ga--~V~v~d~~~~ 98 (243)
+|.|+|+ |.||..+|..+...|. ++.++|+++.
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~ 37 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS 37 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence 5999996 9999999999999995 8999998863
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=96.43 E-value=0.0014 Score=49.87 Aligned_cols=31 Identities=19% Similarity=0.072 Sum_probs=28.8
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.|+|||+||+|+.+|..+..+|.+|+++|..
T Consensus 3 DViIIGgGpaGl~AAi~aar~G~~v~iie~~ 33 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGER 33 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHHHcCCeEEEEEEe
Confidence 4899999999999999999999999999864
|
| >d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Malate oxidoreductase (malic enzyme) species: Thermotoga maritima [TaxId: 2336]
Probab=96.43 E-value=0.027 Score=45.14 Aligned_cols=102 Identities=20% Similarity=0.189 Sum_probs=72.3
Q ss_pred ccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCch-------------hHHHHhhcCC--cccCHHhhhcCCc
Q 037949 58 TDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLI-------------CALQALTEGI--PVLTREDVVSEAG 121 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~-------------r~~~a~~~G~--~~~~~~~~~~~aD 121 (243)
.+..+.+.+++++|+|.-|.++++.+...|. +++.+|+... +...+..... ...++.+++++++
T Consensus 20 ~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~g~~ 99 (222)
T d1vl6a1 20 TEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGAD 99 (222)
T ss_dssp HTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCS
T ss_pred hCCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecceeEEEcCcccccccHHHHHHHhhhcchhhhcchHhhccCcc
Confidence 3456899999999999999999999999998 7999987521 1111221111 1234667788999
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChh
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDML 160 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~ 160 (243)
+++-.+ .+..+..+.+..|.++-++.-.+-...+++..
T Consensus 100 ~~~g~~-~~~~~~~e~m~~~~~rPIIFpLSNPt~~~e~~ 137 (222)
T d1vl6a1 100 FFIGVS-RGNILKPEWIKKMSRKPVIFALANPVPEIDPE 137 (222)
T ss_dssp EEEECS-CSSCSCHHHHTTSCSSCEEEECCSSSCSSCHH
T ss_pred eecccc-ccccccHHHHhhcCCCCEEEecCCCccchhhh
Confidence 887664 56778777889998888887766665455543
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.42 E-value=0.0013 Score=50.64 Aligned_cols=33 Identities=15% Similarity=0.055 Sum_probs=30.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.|+|||+|.-|+.+|..|...|.+|+|+|.++.
T Consensus 7 DviViGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 39 (297)
T d2bcgg1 7 DVIVLGTGITECILSGLLSVDGKKVLHIDKQDH 39 (297)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 399999999999999999999999999999763
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.40 E-value=0.0018 Score=54.49 Aligned_cols=35 Identities=20% Similarity=0.073 Sum_probs=32.9
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.|+|+|||+|.-|+.+|..|+..|.+|+++|.++.
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 58999999999999999999999999999998875
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.39 E-value=0.0017 Score=52.23 Aligned_cols=36 Identities=22% Similarity=0.143 Sum_probs=32.3
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+-.+|+|||+|.-|+.+|..|+..|.+|+|.|.++.
T Consensus 4 ~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~~r 39 (449)
T d2dw4a2 4 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 39 (449)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 346799999999999999999999999999987653
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.38 E-value=0.0018 Score=51.79 Aligned_cols=33 Identities=30% Similarity=0.271 Sum_probs=30.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~ 98 (243)
+|+|||+|+-|+.+|..|+..|. +|.|+|.++.
T Consensus 3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 69999999999999999999996 8999998765
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=96.36 E-value=0.0049 Score=46.75 Aligned_cols=65 Identities=9% Similarity=0.028 Sum_probs=45.8
Q ss_pred EEEEEcCChHHHH-HHHHHHhC-CCEEEEEeCCchhHHHHh-hcCCc--ccCHHhhhc-CCcEEEEccCCh
Q 037949 66 IAVDCGHGDVGRG-CAAALKAV-GARVMGTEIDLICALQAL-TEGIP--VLTREDVVS-EAGLFVTTTENA 130 (243)
Q Consensus 66 ~vlViG~G~IG~~-~A~~l~~~-Ga~V~v~d~~~~r~~~a~-~~G~~--~~~~~~~~~-~aDvvi~a~G~~ 130 (243)
+++|+|+|.+|.. .+..++.. +.+++++|.++.+..... ..+.. ..+.+++++ +.|+|+.|+.+.
T Consensus 3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iD~V~I~tp~~ 73 (167)
T d1xeaa1 3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATD 73 (167)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGG
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHHHhcccccceeccccccc
Confidence 6899999999975 66777666 458889999988765443 34542 234555553 689999887653
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.35 E-value=0.007 Score=46.53 Aligned_cols=83 Identities=12% Similarity=0.034 Sum_probs=56.2
Q ss_pred EEEEEcCChHHHHHHHHHHhC-CCEEE-EEeCCchhHHHH-hhcCC----c-ccCHHhhh--cCCcEEEEccCChhcccH
Q 037949 66 IAVDCGHGDVGRGCAAALKAV-GARVM-GTEIDLICALQA-LTEGI----P-VLTREDVV--SEAGLFVTTTENADIIMV 135 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~-Ga~V~-v~d~~~~r~~~a-~~~G~----~-~~~~~~~~--~~aDvvi~a~G~~~~i~~ 135 (243)
+++|+|+|.+|+..+..++.. +++|+ ++|++++++... ...++ . ..+.++++ .+.|+|+.|+.+..-..
T Consensus 3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~v~I~tp~~~h~~- 81 (184)
T d1ydwa1 3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVE- 81 (184)
T ss_dssp EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHHH-
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhhccccceeeecccchhhcc-
Confidence 689999999999999999876 56765 579998875433 33443 1 23567765 36899999876643332
Q ss_pred HHHccCCCCeEEEE
Q 037949 136 RHMKQMKNAAIVCN 149 (243)
Q Consensus 136 ~~l~~l~~g~~vvn 149 (243)
-....++.|--|..
T Consensus 82 ~~~~~l~~g~~v~~ 95 (184)
T d1ydwa1 82 WAIKAAEKGKHILL 95 (184)
T ss_dssp HHHHHHTTTCEEEE
T ss_pred hhhhhhhccceeec
Confidence 23555666765544
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=96.33 E-value=0.0013 Score=51.53 Aligned_cols=32 Identities=22% Similarity=0.069 Sum_probs=29.8
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.|+|||+||.|+.+|..++.+|.+|+++|..+
T Consensus 5 DvvVIGgGpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 5 DVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 48999999999999999999999999998764
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=96.33 E-value=0.0017 Score=52.55 Aligned_cols=32 Identities=25% Similarity=0.095 Sum_probs=30.3
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.|+|||+|.+|+.+|..|...|.+|+++|.++
T Consensus 6 DvvIIGaGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 59999999999999999999999999999865
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.33 E-value=0.0043 Score=46.66 Aligned_cols=64 Identities=14% Similarity=0.072 Sum_probs=42.8
Q ss_pred EEEEEc-CChHHHHHHHHHH-hCC--CEEEEEeCCchhHHHHhhc--CC-c----c---cCHHhhhcCCcEEEEccCC
Q 037949 66 IAVDCG-HGDVGRGCAAALK-AVG--ARVMGTEIDLICALQALTE--GI-P----V---LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 66 ~vlViG-~G~IG~~~A~~l~-~~G--a~V~v~d~~~~r~~~a~~~--G~-~----~---~~~~~~~~~aDvvi~a~G~ 129 (243)
+|.|+| +|.||..+|..+. ..+ -++..+|.++....++.+. .. . . .+..+.++++|+|+.+.|.
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~ 79 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV 79 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCc
Confidence 689999 5999999998775 334 4899999976543333332 11 1 1 1123457799999998775
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=96.31 E-value=0.0022 Score=51.95 Aligned_cols=35 Identities=29% Similarity=0.210 Sum_probs=31.7
Q ss_pred EEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 66 IAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 66 ~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+++|+|++ +||+++|+.|...|++|++++++.+..
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~ 38 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA 38 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH
Confidence 58999988 899999999999999999999987653
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=96.27 E-value=0.0017 Score=51.81 Aligned_cols=33 Identities=21% Similarity=0.112 Sum_probs=30.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.|+|||+|+.|+.+|..|+..|.+|+++|.++.
T Consensus 4 DViIIGaG~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 4 DVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 489999999999999999999999999998754
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=96.20 E-value=0.0034 Score=47.05 Aligned_cols=38 Identities=18% Similarity=-0.009 Sum_probs=34.1
Q ss_pred cccCcEEEEE--cCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDC--GHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlVi--G~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
..+++.|+|+ |+|.||..+|..|+.+|++|+++++++.
T Consensus 36 ~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 36 KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred cccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 3578899988 8889999999999999999999998764
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.17 E-value=0.0025 Score=50.09 Aligned_cols=33 Identities=21% Similarity=0.061 Sum_probs=30.2
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.|+|||+||-|+.+|..+...|.+|+++|..+.
T Consensus 7 DviVIG~GpAGl~aA~~aa~~G~kV~lie~~~~ 39 (233)
T d1v59a1 7 DVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 589999999999999999999999999997543
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.15 E-value=0.0019 Score=50.08 Aligned_cols=35 Identities=11% Similarity=-0.051 Sum_probs=31.4
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
..++|+|||+||.|+.+|..|+..|++|+++|..+
T Consensus 4 ~~~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~~~ 38 (192)
T d1vdca1 4 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWM 38 (192)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHcCCcEEEEEeec
Confidence 45889999999999999999999999999998544
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.14 E-value=0.0018 Score=51.11 Aligned_cols=33 Identities=18% Similarity=0.065 Sum_probs=30.2
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
-.++|||+||.|+.+|..++.+|.+|+++|.++
T Consensus 6 ~DlvVIG~GpaGl~aA~~aa~~G~~V~liE~~~ 38 (220)
T d1lvla1 6 TTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (220)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 459999999999999999999999999998753
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=96.14 E-value=0.0029 Score=45.34 Aligned_cols=35 Identities=23% Similarity=0.123 Sum_probs=29.8
Q ss_pred CcEEEEEcCChHHHHHHHHHHh---CCCEEEEEeCCch
Q 037949 64 GKIAVDCGHGDVGRGCAAALKA---VGARVMGTEIDLI 98 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~---~Ga~V~v~d~~~~ 98 (243)
.++++|+|+|.||..+|..+.+ .|.+|.++++++.
T Consensus 18 p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEECCChHHHHHHHHhHhhcccccccceeccccc
Confidence 4899999999999999987554 4889999988764
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.13 E-value=0.0026 Score=49.86 Aligned_cols=31 Identities=26% Similarity=0.227 Sum_probs=29.1
Q ss_pred EEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 67 AVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++|||+||.|+.+|..++.+|.+|.++|.++
T Consensus 6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~~ 36 (221)
T d3grsa1 6 YLVIGGGSGGLASARRAAELGARAAVVESHK 36 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeccC
Confidence 8999999999999999999999999998754
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.08 E-value=0.0025 Score=50.50 Aligned_cols=33 Identities=27% Similarity=0.134 Sum_probs=29.2
Q ss_pred EEEEEcCChHHHHHHHHHHh--CCCEEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKA--VGARVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~--~Ga~V~v~d~~~~ 98 (243)
+|+|||+||-|+.+|..|+. .|++|+++|..+.
T Consensus 3 kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 3 QICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred eEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 79999999999999998864 5789999998874
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=96.06 E-value=0.013 Score=44.95 Aligned_cols=67 Identities=19% Similarity=0.139 Sum_probs=44.9
Q ss_pred CcEEEEEcCChHHHHHHH---HHHh--C-CCEEEEEeCCchhHHHHh--------hcCCc-----ccCHHhhhcCCcEEE
Q 037949 64 GKIAVDCGHGDVGRGCAA---ALKA--V-GARVMGTEIDLICALQAL--------TEGIP-----VLTREDVVSEAGLFV 124 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~---~l~~--~-Ga~V~v~d~~~~r~~~a~--------~~G~~-----~~~~~~~~~~aDvvi 124 (243)
.-++.|+|+|.+|...+. .++. + +-+++.+|+++.++.... ..+.. ..+..++++++|+|+
T Consensus 2 ~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~Vv 81 (171)
T d1obba1 2 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 81 (171)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeEe
Confidence 458999999999965332 3332 2 348999999998763211 12221 235778899999999
Q ss_pred EccCCh
Q 037949 125 TTTENA 130 (243)
Q Consensus 125 ~a~G~~ 130 (243)
.+.+..
T Consensus 82 ~~~~~g 87 (171)
T d1obba1 82 NTAMVG 87 (171)
T ss_dssp ECCCTT
T ss_pred eecccc
Confidence 986553
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.05 E-value=0.0029 Score=49.34 Aligned_cols=32 Identities=22% Similarity=0.150 Sum_probs=29.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.|+|||+||.|+.+|..++..|.+|+++|..+
T Consensus 5 DviVIG~GpaGl~aA~~aar~G~kV~vIEk~~ 36 (223)
T d1ebda1 5 ETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN 36 (223)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 58999999999999999999999999998764
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=96.02 E-value=0.0033 Score=49.81 Aligned_cols=32 Identities=28% Similarity=0.107 Sum_probs=30.0
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.|+|||+||.|+.+|..|+.+|.+|+++|..+
T Consensus 8 DviIIG~GPaGlsaA~~aa~~G~~V~viE~~~ 39 (229)
T d1ojta1 8 DVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (229)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 48999999999999999999999999999765
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=96.00 E-value=0.003 Score=48.27 Aligned_cols=65 Identities=15% Similarity=-0.045 Sum_probs=43.0
Q ss_pred EEEEEcCChHHHHHHHH--HHhC----CCEEEEEeCCchhHHHHhhc-------CCc---ccCHHhhhcCCcEEEEccCC
Q 037949 66 IAVDCGHGDVGRGCAAA--LKAV----GARVMGTEIDLICALQALTE-------GIP---VLTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~--l~~~----Ga~V~v~d~~~~r~~~a~~~-------G~~---~~~~~~~~~~aDvvi~a~G~ 129 (243)
++.|+|+|.+|...+.. ++.. +-++..+|+++.++..+... ... ..+..+.++++|+|+.+.|.
T Consensus 2 KIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita~~ 81 (162)
T d1up7a1 2 RIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRP 81 (162)
T ss_dssp EEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCCT
T ss_pred EEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEeccc
Confidence 68999999877554432 2221 34899999999986543321 111 12356678899999998776
Q ss_pred h
Q 037949 130 A 130 (243)
Q Consensus 130 ~ 130 (243)
+
T Consensus 82 ~ 82 (162)
T d1up7a1 82 G 82 (162)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.98 E-value=0.003 Score=50.03 Aligned_cols=32 Identities=19% Similarity=0.134 Sum_probs=29.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.|+|||+||.|+.+|..++.+|.+|.++|..+
T Consensus 5 DviVIG~GpaGl~aA~~aa~~G~kV~viE~~~ 36 (235)
T d1h6va1 5 DLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVT 36 (235)
T ss_dssp EEEEECCSHHHHHHHHHHGGGCCCEEEECCCC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 48999999999999999999999999998543
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=95.96 E-value=0.0029 Score=50.98 Aligned_cols=34 Identities=26% Similarity=0.265 Sum_probs=31.4
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
..|+|||+|+-|+.+|..|+..|.+|+++|.++.
T Consensus 5 ~DViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (253)
T d2gqfa1 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (253)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 3599999999999999999999999999998865
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=95.96 E-value=0.01 Score=45.52 Aligned_cols=67 Identities=9% Similarity=-0.038 Sum_probs=43.6
Q ss_pred CcEEEEEcCChHHHH--HHHHHH-hC---CCEEEEEeCCchhHHHHh--------hcCCc-----ccCHHhhhcCCcEEE
Q 037949 64 GKIAVDCGHGDVGRG--CAAALK-AV---GARVMGTEIDLICALQAL--------TEGIP-----VLTREDVVSEAGLFV 124 (243)
Q Consensus 64 g~~vlViG~G~IG~~--~A~~l~-~~---Ga~V~v~d~~~~r~~~a~--------~~G~~-----~~~~~~~~~~aDvvi 124 (243)
.-+++|+|+|.+|.. +...++ .. +-+++.+|++++++.... ..+.. ..+..+++++||+|+
T Consensus 3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vv 82 (167)
T d1u8xx1 3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 82 (167)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEE
Confidence 357999999987643 333332 22 237999999998864211 11221 135678889999999
Q ss_pred EccCCh
Q 037949 125 TTTENA 130 (243)
Q Consensus 125 ~a~G~~ 130 (243)
.+.|.+
T Consensus 83 itag~~ 88 (167)
T d1u8xx1 83 AHIRVG 88 (167)
T ss_dssp ECCCTT
T ss_pred ECCCcC
Confidence 998753
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.94 E-value=0.012 Score=45.36 Aligned_cols=63 Identities=14% Similarity=0.068 Sum_probs=42.9
Q ss_pred cEEEEEcC-ChHHHHHHHHHHhCCCEE--EEEeCCchhHHHHhhcCCcc-----cCH---HhhhcCCcEEEEccC
Q 037949 65 KIAVDCGH-GDVGRGCAAALKAVGARV--MGTEIDLICALQALTEGIPV-----LTR---EDVVSEAGLFVTTTE 128 (243)
Q Consensus 65 ~~vlViG~-G~IG~~~A~~l~~~Ga~V--~v~d~~~~r~~~a~~~G~~~-----~~~---~~~~~~aDvvi~a~G 128 (243)
++|+|+|+ |.||+.+++.|...|.+| +...+++.... ....+.+. .+. .++++++|.|+.+.+
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~ 77 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-KIGGEADVFIGDITDADSINPAFQGIDALVILTS 77 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-HTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-hccCCcEEEEeeeccccccccccccceeeEEEEe
Confidence 68999995 799999999999999754 44556665432 22223321 222 345678999998754
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.93 E-value=0.0031 Score=51.69 Aligned_cols=31 Identities=29% Similarity=0.241 Sum_probs=29.5
Q ss_pred EEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 67 AVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
|+|||+|.-|+.+|..|+..|.+|+|.|.++
T Consensus 2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 8999999999999999999999999999765
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=95.93 E-value=0.0065 Score=48.27 Aligned_cols=87 Identities=21% Similarity=0.144 Sum_probs=58.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCC--CEEEEEeCCchhHHHHhh----cCCc-c----cCHHhh---hcCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVG--ARVMGTEIDLICALQALT----EGIP-V----LTREDV---VSEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~G--a~V~v~d~~~~r~~~a~~----~G~~-~----~~~~~~---~~~aDvvi~a 126 (243)
..+|++|+-+|+|+ |...+..++..| .+|+.+|.++.....|.. .+.. + -+..+. -...|+|+..
T Consensus 73 l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~~fD~I~~~ 151 (213)
T d1dl5a1 73 LDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVT 151 (213)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred ccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccccccchhhhhhh
Confidence 35899999999997 666666665544 589999999987766653 2332 1 122221 1247988766
Q ss_pred cCChhcccHHHHccCCCCeEEEE
Q 037949 127 TENADIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g~~vvn 149 (243)
.+..++. .+.++.+|+||+++.
T Consensus 152 ~~~~~~p-~~l~~~LkpGG~lv~ 173 (213)
T d1dl5a1 152 VGVDEVP-ETWFTQLKEGGRVIV 173 (213)
T ss_dssp SBBSCCC-HHHHHHEEEEEEEEE
T ss_pred ccHHHhH-HHHHHhcCCCcEEEE
Confidence 5444443 457889999999875
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=95.90 E-value=0.004 Score=52.24 Aligned_cols=34 Identities=29% Similarity=0.069 Sum_probs=30.2
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCch
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLI 98 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~ 98 (243)
|+|+|||+|+-|+.+|..|+..|. +|++.|.++.
T Consensus 5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 899999999999999999987774 9999998753
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.83 E-value=0.021 Score=43.60 Aligned_cols=65 Identities=17% Similarity=0.164 Sum_probs=41.3
Q ss_pred EEEEEcCChHH--HHHHHHHHhC---C-CEEEEEeCCchhH-HHHhh---------cCCc-----ccCHHhhhcCCcEEE
Q 037949 66 IAVDCGHGDVG--RGCAAALKAV---G-ARVMGTEIDLICA-LQALT---------EGIP-----VLTREDVVSEAGLFV 124 (243)
Q Consensus 66 ~vlViG~G~IG--~~~A~~l~~~---G-a~V~v~d~~~~r~-~~a~~---------~G~~-----~~~~~~~~~~aDvvi 124 (243)
++.|+|+|.+| ..++..++.. . -+++.+|+++.+. ..+.. .+.. ..+..+.++++|+|+
T Consensus 3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvVv 82 (169)
T d1s6ya1 3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFVT 82 (169)
T ss_dssp EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEEE
Confidence 69999999665 4555555432 2 3899999988542 11111 1222 134567788999999
Q ss_pred EccCCh
Q 037949 125 TTTENA 130 (243)
Q Consensus 125 ~a~G~~ 130 (243)
.+.|.+
T Consensus 83 ~ta~~~ 88 (169)
T d1s6ya1 83 TQFRVG 88 (169)
T ss_dssp ECCCTT
T ss_pred EccccC
Confidence 998753
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=95.79 E-value=0.004 Score=52.10 Aligned_cols=36 Identities=19% Similarity=0.035 Sum_probs=32.3
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
..-.|+|||+|+-|+.+|..|+..|.+|++.|.++.
T Consensus 6 ~~~dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 6 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 345799999999999999999999999999998654
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=95.79 E-value=0.0036 Score=51.42 Aligned_cols=32 Identities=25% Similarity=0.163 Sum_probs=29.3
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~ 97 (243)
+|+|||+|.+|+.+|..|...|. +|+++|.++
T Consensus 3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 59999999999999999999997 699999875
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=95.75 E-value=0.014 Score=47.78 Aligned_cols=90 Identities=20% Similarity=0.253 Sum_probs=58.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCCcc----cCHHhhh--cCCcEEEEccCCh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----EGIPV----LTREDVV--SEAGLFVTTTENA 130 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~~~----~~~~~~~--~~aDvvi~a~G~~ 130 (243)
..+|++|+=+|+|. |.... .++..|++|+.+|+|+.....|+. .|... .+..+.. ..+|+|+......
T Consensus 118 ~~~g~~VLDiGcGs-G~l~i-~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~~~~~~fD~V~ani~~~ 195 (254)
T d2nxca1 118 LRPGDKVLDLGTGS-GVLAI-AAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTT-SHHHH-HHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH
T ss_pred cCccCEEEEcccch-hHHHH-HHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccccccccccchhhhccccc
Confidence 46899999999995 44333 445679999999999998766553 34431 2333333 3588887542111
Q ss_pred ---hcccHHHHccCCCCeEEEEecCC
Q 037949 131 ---DIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 131 ---~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
..+ .+..+.+||||+++..|+.
T Consensus 196 ~l~~l~-~~~~~~LkpGG~lilSgil 220 (254)
T d2nxca1 196 LHAALA-PRYREALVPGGRALLTGIL 220 (254)
T ss_dssp HHHHHH-HHHHHHEEEEEEEEEEEEE
T ss_pred cHHHHH-HHHHHhcCCCcEEEEEecc
Confidence 222 2345778999999987764
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=95.72 E-value=0.0041 Score=51.52 Aligned_cols=34 Identities=18% Similarity=0.045 Sum_probs=30.0
Q ss_pred cEEEEEcCChHHHHHHHHHH-----hCCCEEEEEeCCch
Q 037949 65 KIAVDCGHGDVGRGCAAALK-----AVGARVMGTEIDLI 98 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~-----~~Ga~V~v~d~~~~ 98 (243)
-.|+|+|+|+.|+.+|..|. ..|.+|+++|.++.
T Consensus 8 yDV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~ 46 (360)
T d1pn0a1 8 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 46 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence 46999999999999999995 57999999998764
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=95.72 E-value=0.017 Score=43.01 Aligned_cols=64 Identities=16% Similarity=0.055 Sum_probs=41.8
Q ss_pred EEEEEc-CChHHHHHHHHHHhCCC--EEEEEeCCchh-HHH--Hhhc----CCc----c-cCHHhhhcCCcEEEEccCC
Q 037949 66 IAVDCG-HGDVGRGCAAALKAVGA--RVMGTEIDLIC-ALQ--ALTE----GIP----V-LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 66 ~vlViG-~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r-~~~--a~~~----G~~----~-~~~~~~~~~aDvvi~a~G~ 129 (243)
+|.|+| +|.||..+|..+...|. +++++|++... ..+ +.+. .+. + ..-.+.+.++|+|+.+.|.
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~aDiVvitaG~ 80 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhhcCEEEEeccc
Confidence 799999 69999999999999987 78999975421 111 2221 111 1 0112345688888877663
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.70 E-value=0.0032 Score=50.97 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=32.8
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~ 97 (243)
+..++|+|+|+|++|..++..|...|. +++++|.|.
T Consensus 28 L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 64 (247)
T d1jw9b_ 28 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 64 (247)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HhCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence 577999999999999999999999999 899998653
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.69 E-value=0.0052 Score=45.33 Aligned_cols=36 Identities=28% Similarity=0.211 Sum_probs=30.9
Q ss_pred cCcEEEEEcCChHHHHHHHHH----HhCCCEEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAAL----KAVGARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l----~~~Ga~V~v~d~~~~ 98 (243)
.+++++|+|+|.+|..+|..+ +..|.+|++++.++.
T Consensus 36 ~~k~i~IvGgG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 36 EVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp HCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 578999999999999888777 467999999988665
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=95.63 E-value=0.0053 Score=49.70 Aligned_cols=32 Identities=16% Similarity=0.188 Sum_probs=29.8
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.|+|||+|.+|+.+|..|...|.+|+++|..+
T Consensus 5 DvvIIGaGi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 49999999999999999999999999998754
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=95.58 E-value=0.0048 Score=48.00 Aligned_cols=31 Identities=19% Similarity=0.098 Sum_probs=29.0
Q ss_pred EEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 67 AVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
|+|||+||-|+.+|..++..|.+|.++|..+
T Consensus 6 viIIGgGpAGl~aA~~aar~G~~V~viE~~~ 36 (229)
T d3lada1 6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 8999999999999999999999999998653
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=95.57 E-value=0.0073 Score=49.17 Aligned_cols=34 Identities=26% Similarity=0.240 Sum_probs=29.0
Q ss_pred EEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 66 IAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 66 ~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.++|+|++ +||+++|+.|...|++|++++.++..
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~ 38 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA 38 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHH
Confidence 36788987 89999999999999999998776543
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=95.56 E-value=0.0053 Score=50.56 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=30.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.|+|||+|..|+.+|..|+..|++|+++|..+.
T Consensus 18 DVlVIG~G~aGl~aA~~la~~G~~V~lvEK~~~ 50 (308)
T d1y0pa2 18 DVVVVGSGGAGFSAAISATDSGAKVILIEKEPV 50 (308)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 599999999999999999999999999997653
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.52 E-value=0.0052 Score=51.08 Aligned_cols=33 Identities=27% Similarity=0.287 Sum_probs=30.9
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++|||+|.-|+.+|..|...|.+|.+.|.++.
T Consensus 3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred cEEEECCcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 689999999999999999999999999998765
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=95.52 E-value=0.013 Score=46.54 Aligned_cols=84 Identities=10% Similarity=-0.045 Sum_probs=52.9
Q ss_pred cEEEEEcCChHHHH-HHHHHHhC-CCEEE-EEeCCchhHHHHh-hcCCc------ccCHHhhhc--CCcEEEEccCChhc
Q 037949 65 KIAVDCGHGDVGRG-CAAALKAV-GARVM-GTEIDLICALQAL-TEGIP------VLTREDVVS--EAGLFVTTTENADI 132 (243)
Q Consensus 65 ~~vlViG~G~IG~~-~A~~l~~~-Ga~V~-v~d~~~~r~~~a~-~~G~~------~~~~~~~~~--~aDvvi~a~G~~~~ 132 (243)
-+++|||+|.+|+. .+..++.. +.+|+ ++|++++++.... ..|.+ ..+.+++++ +.|+|+.|+.+..-
T Consensus 34 iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~tp~~~H 113 (221)
T d1h6da1 34 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLH 113 (221)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGGH
T ss_pred EEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcccccceeeeeccchhhh
Confidence 48999999999974 55555554 66765 6899998865443 34543 234566664 68999888765322
Q ss_pred ccHHHHccCCCCeEEEE
Q 037949 133 IMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvn 149 (243)
.. -....++.|--|..
T Consensus 114 ~~-~~~~al~~gk~v~~ 129 (221)
T d1h6da1 114 AE-FAIRAFKAGKHVMC 129 (221)
T ss_dssp HH-HHHHHHHTTCEEEE
T ss_pred hh-HHHHhhhcchhhhc
Confidence 22 23444555654443
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.48 E-value=0.0042 Score=48.85 Aligned_cols=34 Identities=21% Similarity=-0.016 Sum_probs=30.4
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC-------CEEEEEeCCch
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG-------ARVMGTEIDLI 98 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G-------a~V~v~d~~~~ 98 (243)
.+|+|||+||-|+.+|..|+..| .+|.++|.++.
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~ 43 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 43 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence 48999999999999999998887 58999998764
|
| >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=95.46 E-value=0.091 Score=39.53 Aligned_cols=101 Identities=18% Similarity=0.093 Sum_probs=70.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC-----chhHHHHhh----cCC--c-ccCHHhhhcCCcEEEEcc-
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID-----LICALQALT----EGI--P-VLTREDVVSEAGLFVTTT- 127 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~-----~~r~~~a~~----~G~--~-~~~~~~~~~~aDvvi~a~- 127 (243)
+.|.+|+++|-+ ++-...+..+..+|+++.++-+. +.-...+.. .+. . ..++.++++++|+|+...
T Consensus 2 l~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~adviy~~~~ 81 (163)
T d1pvva2 2 IKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVW 81 (163)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCC
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEecccccCCChHHHHHHHHhhhcccceEEEecCHHHHhhhccEEeecce
Confidence 679999999988 89999999999999999988443 221222221 122 2 346788999999998653
Q ss_pred ---C---C---------hhcccHHHHccCCCCeEEEEecCC--CCCCChhHH
Q 037949 128 ---E---N---------ADIIMVRHMKQMKNAAIVCNIGHF--DNEIDMLDL 162 (243)
Q Consensus 128 ---G---~---------~~~i~~~~l~~l~~g~~vvnvg~~--~~~id~~~l 162 (243)
+ . +-.++.+.++.++++++|.-.+.. +.||+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~y~v~~~~l~~ak~~~iimHplP~~Rg~EI~~~v~ 133 (163)
T d1pvva2 82 ASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVI 133 (163)
T ss_dssp CCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHH
T ss_pred eecccchhhHHHHHHhhhhhHHHHHHHhhCCCeEEecCCccccccccchhhh
Confidence 1 0 123667778888999999987763 356665543
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=95.44 E-value=0.0067 Score=49.51 Aligned_cols=36 Identities=22% Similarity=0.183 Sum_probs=31.2
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCCEEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga~V~v~d~~~~ 98 (243)
....|+|||+|+-|+.+|..|.. .|.+|+++|..+.
T Consensus 32 ~e~DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~~ 68 (278)
T d1rp0a1 32 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 68 (278)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHccCCeEEEEecCCC
Confidence 45679999999999999999865 6999999998763
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.42 E-value=0.0078 Score=44.87 Aligned_cols=31 Identities=23% Similarity=0.129 Sum_probs=27.2
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+|+|+|+|++|..+|..|+. +.+|+++++.+
T Consensus 2 rVvIIGgG~~G~e~A~~l~~-~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGNGPGGFELAKQLSQ-TYEVTVIDKEP 32 (167)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSSS
T ss_pred eEEEECCcHHHHHHHHHHHc-CCCEEEEeccc
Confidence 79999999999999999974 77999998654
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=95.41 E-value=0.007 Score=43.32 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=29.8
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCC---CEEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVG---ARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~G---a~V~v~d~~~~ 98 (243)
..++++|+|+|++|..+|..+..+| .+|+++++.+.
T Consensus 19 ~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 19 PPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred cCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 3589999999999999998777655 47999988764
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=95.41 E-value=0.017 Score=48.33 Aligned_cols=68 Identities=18% Similarity=0.159 Sum_probs=47.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-----hc-C-C------ccc---CHHhhhcCCcEE
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL-----TE-G-I------PVL---TREDVVSEAGLF 123 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-----~~-G-~------~~~---~~~~~~~~aDvv 123 (243)
..+||+|+|+|+. -||..+++.|...|.+|+++.++..+...-. .. . . +.. .+.+++.++|.+
T Consensus 8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v 87 (342)
T d1y1pa1 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhh
Confidence 3579999999976 5999999999999999999888765432211 00 1 0 111 123456789999
Q ss_pred EEccC
Q 037949 124 VTTTE 128 (243)
Q Consensus 124 i~a~G 128 (243)
+.+.+
T Consensus 88 ~~~a~ 92 (342)
T d1y1pa1 88 AHIAS 92 (342)
T ss_dssp EECCC
T ss_pred hhhcc
Confidence 87754
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.41 E-value=0.011 Score=44.55 Aligned_cols=35 Identities=26% Similarity=0.244 Sum_probs=29.8
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDL 97 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~ 97 (243)
.+++|+|||+|.+|.-+|..+...|+ .|+++.+.+
T Consensus 44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 46789999999999999999999999 577775544
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=95.38 E-value=0.027 Score=43.00 Aligned_cols=83 Identities=17% Similarity=0.007 Sum_probs=52.6
Q ss_pred EEEEEcCChHHHH-HHHHHHhCC--CEEE-EEeCCchhHHHHh-hcCCc--ccCHHhhhc--CCcEEEEccCChhcccHH
Q 037949 66 IAVDCGHGDVGRG-CAAALKAVG--ARVM-GTEIDLICALQAL-TEGIP--VLTREDVVS--EAGLFVTTTENADIIMVR 136 (243)
Q Consensus 66 ~vlViG~G~IG~~-~A~~l~~~G--a~V~-v~d~~~~r~~~a~-~~G~~--~~~~~~~~~--~aDvvi~a~G~~~~i~~~ 136 (243)
+++|+|+|.+|.. .+..++..+ .+|+ ++|+++.++.... ..+.. ..+.+++++ +.|+|+.||.+..-.. -
T Consensus 5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~ell~~~~id~v~I~tp~~~h~~-~ 83 (181)
T d1zh8a1 5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELNLP-F 83 (181)
T ss_dssp EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGGHHH-H
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeeeeeccccccccceeecccccccccc-c
Confidence 7899999999986 577777654 3654 6899998765433 34543 346777764 5899998876532121 1
Q ss_pred HHccCCCCeEEEE
Q 037949 137 HMKQMKNAAIVCN 149 (243)
Q Consensus 137 ~l~~l~~g~~vvn 149 (243)
....++.|--|..
T Consensus 84 ~~~al~~gk~V~~ 96 (181)
T d1zh8a1 84 IEKALRKGVHVIC 96 (181)
T ss_dssp HHHHHHTTCEEEE
T ss_pred cccccccchhhhc
Confidence 2333444544443
|
| >d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.31 E-value=0.0079 Score=48.58 Aligned_cols=31 Identities=23% Similarity=0.146 Sum_probs=29.1
Q ss_pred EEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 67 AVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++|||+||.|+.+|..++..|.+|.++|.++
T Consensus 4 viVIG~G~aG~~aA~~aa~~G~~V~liE~~~ 34 (259)
T d1onfa1 4 LIVIGGGSGGMAAARRAARHNAKVALVEKSR 34 (259)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 8999999999999999999999999999753
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=95.15 E-value=0.025 Score=45.61 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=43.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchh-----H---HHHhhcCCccc-----CH---HhhhcCCcEEEEcc
Q 037949 65 KIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLIC-----A---LQALTEGIPVL-----TR---EDVVSEAGLFVTTT 127 (243)
Q Consensus 65 ~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r-----~---~~a~~~G~~~~-----~~---~~~~~~aDvvi~a~ 127 (243)
++|+|+|+ |-||..++..|...|.+|++..+++.. . ......+++++ +. .+.+.+++.++.+.
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~ 83 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL 83 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhhh
Confidence 56999996 899999999999999999998775431 1 11122344322 22 33457888888775
Q ss_pred C
Q 037949 128 E 128 (243)
Q Consensus 128 G 128 (243)
+
T Consensus 84 ~ 84 (312)
T d1qyda_ 84 A 84 (312)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=95.11 E-value=0.013 Score=48.82 Aligned_cols=37 Identities=27% Similarity=0.239 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.+||+|+|+|+. -||..+++.|...|.+|+++|+++.
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~ 43 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAP 43 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCS
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 579999999954 7999999999999999999998764
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=95.04 E-value=0.0091 Score=49.57 Aligned_cols=33 Identities=30% Similarity=0.366 Sum_probs=30.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.|+|||+|+.|+.+|..|...|++|+++|..+.
T Consensus 25 DVvVIG~G~aGl~aA~~la~~G~~V~llEk~~~ 57 (322)
T d1d4ca2 25 DVVIIGSGGAGLAAAVSARDAGAKVILLEKEPI 57 (322)
T ss_dssp SEEEECSSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred eEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 499999999999999999999999999997653
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=94.98 E-value=0.03 Score=42.97 Aligned_cols=31 Identities=26% Similarity=0.238 Sum_probs=26.0
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEE-EeCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMG-TEID 96 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v-~d~~ 96 (243)
+|+|=|+|.||+.+.+.+...+.+|+. -|..
T Consensus 2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~ 33 (169)
T d1dssg1 2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPF 33 (169)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECTT
T ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEECCCC
Confidence 589999999999999999988887655 4654
|
| >d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.96 E-value=0.012 Score=47.60 Aligned_cols=34 Identities=29% Similarity=0.221 Sum_probs=30.8
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.-.++|||+|+.|+.+|..+..+|.+|+++|.++
T Consensus 42 ~yDvvVIGgG~aG~~aA~~~a~~G~kv~vve~~~ 75 (261)
T d1mo9a1 42 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 75 (261)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 4469999999999999999999999999998765
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=94.83 E-value=0.0098 Score=49.42 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=30.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
-.|+|||+|..|+.+|..++..|++|+++|..+.
T Consensus 20 ~DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~~~ 53 (317)
T d1qo8a2 20 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPF 53 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred cCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 4699999999999999999999999999987653
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.78 E-value=0.016 Score=45.88 Aligned_cols=69 Identities=12% Similarity=0.068 Sum_probs=47.6
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCCc--ccC------HHhhhcCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGIP--VLT------REDVVSEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~~--~~~------~~~~~~~aDvvi~a~G~ 129 (243)
.+.+++|+|+|+ |-||..+++.|...|. +|++..+++.....-...... ..+ ..+.++++|+++.|.|.
T Consensus 11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~ 90 (232)
T d2bkaa1 11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT 90 (232)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccc
Confidence 357899999995 6899999999998885 899988876542111111111 122 23456789999998764
|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Wolinella succinogenes [TaxId: 844]
Probab=94.73 E-value=0.013 Score=48.63 Aligned_cols=33 Identities=18% Similarity=0.136 Sum_probs=30.3
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.|+|||+|+-|+.+|..|+..|++|++++..+.
T Consensus 7 DVvVIG~G~AGl~AAl~aa~~G~~V~liEK~~~ 39 (336)
T d2bs2a2 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (336)
T ss_dssp SEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 499999999999999999999999999987654
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=94.69 E-value=0.016 Score=46.25 Aligned_cols=87 Identities=17% Similarity=0.122 Sum_probs=57.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCCc-c--c--CHHh---hhcCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----EGIP-V--L--TRED---VVSEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~~-~--~--~~~~---~~~~aDvvi~a~G 128 (243)
..+|++|+.+|+| .|..+|..++-.|.+|+.+|+++.....+.. .|.+ + . +..+ .....|.|+...+
T Consensus 76 l~~g~~VLeIGsG-sGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pfD~Iiv~~a 154 (215)
T d1jg1a_ 76 LKPGMNILEVGTG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAG 154 (215)
T ss_dssp CCTTCCEEEECCT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred cCccceEEEecCC-CChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcceeEEeecc
Confidence 3589999999998 4555555555557789999999876555542 3543 1 1 1111 1234798876655
Q ss_pred ChhcccHHHHccCCCCeEEEE
Q 037949 129 NADIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvn 149 (243)
... +....++.+++||+++.
T Consensus 155 ~~~-ip~~l~~qL~~gGrLv~ 174 (215)
T d1jg1a_ 155 APK-IPEPLIEQLKIGGKLII 174 (215)
T ss_dssp BSS-CCHHHHHTEEEEEEEEE
T ss_pred ccc-CCHHHHHhcCCCCEEEE
Confidence 444 44467899999999985
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=94.68 E-value=0.017 Score=46.55 Aligned_cols=37 Identities=19% Similarity=0.042 Sum_probs=31.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCC-EEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGA-RVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga-~V~v~d~~~ 97 (243)
..++++++|+|++ +||+.+|+.|...|+ +|+++-+++
T Consensus 6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~ 44 (259)
T d2fr1a1 6 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSG 44 (259)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSG
T ss_pred cCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 4578899999975 999999999999999 577776653
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.65 E-value=0.005 Score=46.93 Aligned_cols=30 Identities=23% Similarity=0.149 Sum_probs=25.4
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEe
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTE 94 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d 94 (243)
.+|+|+|+|++|..+|..|+.+|.+|.++.
T Consensus 4 a~VvIIGgG~~G~e~A~~l~~~g~~v~i~~ 33 (183)
T d1d7ya1 4 APVVVLGAGLASVSFVAELRQAGYQGLITV 33 (183)
T ss_dssp SSEEEECCSHHHHHHHHHHHHHTCCSCEEE
T ss_pred CCEEEECccHHHHHHHHHHHhcCCceEEEE
Confidence 359999999999999999999998654443
|
| >d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=94.61 E-value=0.0089 Score=44.69 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=27.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVM 91 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~ 91 (243)
...|++|+|+|+|.+|..+|..+...|++++
T Consensus 26 ~~~gkrVvVIGgG~~g~d~a~~~~r~G~~~~ 56 (162)
T d1ps9a2 26 APVGNKVAIIGCGGIGFDTAMYLSQPGESTS 56 (162)
T ss_dssp CCCCSEEEEECCHHHHHHHHHHHTCCSSCGG
T ss_pred cccCCceEEEcCchhHHHHHHHHHHcCCccc
Confidence 3579999999999999999999999998643
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=94.52 E-value=0.018 Score=45.93 Aligned_cols=89 Identities=13% Similarity=0.064 Sum_probs=55.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCCc----c--cCHHhhh--cCCcEEEEcc-
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----EGIP----V--LTREDVV--SEAGLFVTTT- 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~~----~--~~~~~~~--~~aDvvi~a~- 127 (243)
..+|++|+=+|||+=+ .+...++..|++|+.+|+|+...+.|++ .|.. . .+..+.. ..+|+|+..-
T Consensus 31 l~pg~~VLDiGCG~G~-~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 109 (245)
T d1nkva_ 31 MKPGTRILDLGSGSGE-MLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGA 109 (245)
T ss_dssp CCTTCEEEEETCTTCH-HHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEEESC
T ss_pred CCCCCEEEEEcCCCCH-HHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhccccCceeEEEEEeh
Confidence 3579999999999533 3444556689999999999876554443 3431 1 1222222 3578886541
Q ss_pred ----CChhcccHHHHccCCCCeEEEEe
Q 037949 128 ----ENADIIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 128 ----G~~~~i~~~~l~~l~~g~~vvnv 150 (243)
.++..+-.+..+.+||||+++..
T Consensus 110 ~~~~~d~~~~l~~~~r~LkPGG~l~i~ 136 (245)
T d1nkva_ 110 TWIAGGFAGAEELLAQSLKPGGIMLIG 136 (245)
T ss_dssp GGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred hhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence 22222223567888999998864
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=94.48 E-value=0.014 Score=46.62 Aligned_cols=65 Identities=15% Similarity=0.198 Sum_probs=44.6
Q ss_pred cEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH---HH-----H-hhcCCccc--C------HHhhhcCCcEEEEc
Q 037949 65 KIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA---LQ-----A-LTEGIPVL--T------REDVVSEAGLFVTT 126 (243)
Q Consensus 65 ~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~---~~-----a-~~~G~~~~--~------~~~~~~~aDvvi~a 126 (243)
|+|+|+|+ |-||..++..|...|.+|++.++++... .. . ...+++++ + ..+.+.++|.++.+
T Consensus 4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~ 83 (307)
T d1qyca_ 4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST 83 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeec
Confidence 78999997 7999999999999999999998765431 00 1 11233322 1 12345688888877
Q ss_pred cCC
Q 037949 127 TEN 129 (243)
Q Consensus 127 ~G~ 129 (243)
.+.
T Consensus 84 ~~~ 86 (307)
T d1qyca_ 84 VGS 86 (307)
T ss_dssp CCG
T ss_pred ccc
Confidence 653
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.48 E-value=0.12 Score=44.82 Aligned_cols=88 Identities=15% Similarity=0.248 Sum_probs=60.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhc-----------CCc-----c------cC---HH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTE-----------GIP-----V------LT---RE 114 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~-----------G~~-----~------~~---~~ 114 (243)
..+|++++=+|+| .|..+..+++..|+ +|+.+|.++.....|... |.. . .+ ..
T Consensus 214 Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~~~~~~d 292 (406)
T d1u2za_ 214 LKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVA 292 (406)
T ss_dssp CCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechhhccccc
Confidence 3589999999999 68888888888887 899999999876555421 110 0 00 23
Q ss_pred hhhcCCcEEEEccC--C---hhcccHHHHccCCCCeEEEEe
Q 037949 115 DVVSEAGLFVTTTE--N---ADIIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 115 ~~~~~aDvvi~a~G--~---~~~i~~~~l~~l~~g~~vvnv 150 (243)
+.+..+|+++...- . ...+. +.+..||+||++|..
T Consensus 293 ~~~~~adVV~inn~~f~~~l~~~L~-ei~r~LKPGGrIVs~ 332 (406)
T d1u2za_ 293 ELIPQCDVILVNNFLFDEDLNKKVE-KILQTAKVGCKIISL 332 (406)
T ss_dssp HHGGGCSEEEECCTTCCHHHHHHHH-HHHTTCCTTCEEEES
T ss_pred cccccceEEEEecccCchHHHHHHH-HHHHhcCCCcEEEEe
Confidence 44668999875421 1 23343 578999999999874
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.45 E-value=0.019 Score=44.13 Aligned_cols=32 Identities=13% Similarity=0.020 Sum_probs=27.9
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~ 97 (243)
+|+|+|+|.+|..+|..|+..+. +|+++++++
T Consensus 2 KVvIIGgG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 69999999999999999998754 798888654
|
| >d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: Dhaf3308-like family: Dhaf3308-like domain: Hypothetical protein Dhaf 3308 species: Desulfitobacterium hafniense [TaxId: 49338]
Probab=94.36 E-value=0.051 Score=44.20 Aligned_cols=112 Identities=17% Similarity=0.113 Sum_probs=70.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCC---hhcccHHH
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTEN---ADIIMVRH 137 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~---~~~i~~~~ 137 (243)
..|++|+|||+-| ....++..|+++.+.|++|.. |.. ....++.+..||+|+.+ |+ .++++ ..
T Consensus 120 ~~g~kV~vIG~~P----~v~~l~~~~~~~~VlE~~p~~-------gd~p~~~~~~lLp~aD~viiT-GsTlvN~Tl~-~L 186 (251)
T d2h1qa1 120 VKGKKVGVVGHFP----HLESLLEPICDLSILEWSPEE-------GDYPLPASEFILPECDYVYIT-CASVVDKTLP-RL 186 (251)
T ss_dssp TTTSEEEEESCCT----THHHHHTTTSEEEEEESSCCT-------TCEEGGGHHHHGGGCSEEEEE-THHHHHTCHH-HH
T ss_pred cCCCEEEEEecch----hHHHHHhcCCcEEEEeCCCCC-------CCCCchHHHHhhhcCCEEEEE-echhhcCCHH-HH
Confidence 3689999999876 345567889999999999852 221 11235567899999755 43 34564 46
Q ss_pred HccCCCCeEEEEecCCCCCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcC
Q 037949 138 MKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAER 195 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G 195 (243)
++..++...++.+|... ++-.. +..+ .++. +.+....|.+++++.+++|
T Consensus 187 L~~~~~a~~vvl~GPS~-p~~P~-lf~~-Gv~~------lag~~v~d~~~~~~~i~~G 235 (251)
T d2h1qa1 187 LELSRNARRITLVGPGT-PLAPV-LFEH-GLQE------LSGFMVKDNARAFRIVAGA 235 (251)
T ss_dssp HHHTTTSSEEEEESTTC-CCCGG-GGGT-TCSE------EEEEEESCHHHHHHHHTTS
T ss_pred HHhCCcCCEEEEECCCc-ccCHH-HHhc-CCce------EeEEEEeCHHHHHHHHHcC
Confidence 77778888899999874 33333 3221 2221 1122234544466777765
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=94.36 E-value=0.039 Score=40.21 Aligned_cols=48 Identities=8% Similarity=0.184 Sum_probs=36.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHhCCCEEEE-EeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCC
Q 037949 66 IAVDCGH-GDVGRGCAAALKAVGARVMG-TEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 66 ~vlViG~-G~IG~~~A~~l~~~Ga~V~v-~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~ 129 (243)
+++|.|+ |.+|+.+++.+...|.+++. .|.+.. +.+..+||+|+.|..
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~----------------~~~~~~DVvIDFS~p 51 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV----------------EELDSPDVVIDFSSP 51 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE----------------EECSCCSEEEECSCG
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH----------------HHhccCCEEEEecCH
Confidence 5899997 99999999999999998654 454432 123578999999643
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.34 E-value=0.03 Score=44.63 Aligned_cols=89 Identities=13% Similarity=0.097 Sum_probs=56.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHh--CCCEEEEEeCCchhHHHHhh----cCCc--------c--cCHHh---hhcCCcE
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKA--VGARVMGTEIDLICALQALT----EGIP--------V--LTRED---VVSEAGL 122 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~--~Ga~V~v~d~~~~r~~~a~~----~G~~--------~--~~~~~---~~~~aDv 122 (243)
.+|++|+-+|+|. |..++..++. ...+|+.+|+++...+.|.+ .+.. . -+..+ .....|+
T Consensus 75 ~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~~~~~fD~ 153 (224)
T d1i1na_ 75 HEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 153 (224)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccchhhhhhh
Confidence 5899999999993 4444444443 44589999999987655542 1211 0 01111 1124798
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEE-ecC
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCN-IGH 152 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvn-vg~ 152 (243)
|+......++. .+.++.||+||+++. ++.
T Consensus 154 I~~~~~~~~ip-~~l~~~LkpGG~LV~pv~~ 183 (224)
T d1i1na_ 154 IHVGAAAPVVP-QALIDQLKPGGRLILPVGP 183 (224)
T ss_dssp EEECSBBSSCC-HHHHHTEEEEEEEEEEESC
T ss_pred hhhhcchhhcC-HHHHhhcCCCcEEEEEEcc
Confidence 88765555544 457899999999985 443
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.32 E-value=0.017 Score=49.61 Aligned_cols=34 Identities=29% Similarity=0.196 Sum_probs=29.9
Q ss_pred cEEEEEcCChHHHHHHHHHHh------CCCEEEEEeCCch
Q 037949 65 KIAVDCGHGDVGRGCAAALKA------VGARVMGTEIDLI 98 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~------~Ga~V~v~d~~~~ 98 (243)
=.|+|||+||-|+.+|..|+. .|.+|+++|...+
T Consensus 33 ~DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~ 72 (380)
T d2gmha1 33 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 72 (380)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence 369999999999999998875 8999999998654
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=94.16 E-value=0.033 Score=44.52 Aligned_cols=86 Identities=15% Similarity=0.112 Sum_probs=56.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc--CCc---cc--CHHhh---hcCCcEEEEccCCh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE--GIP---VL--TREDV---VSEAGLFVTTTENA 130 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~--G~~---~~--~~~~~---~~~aDvvi~a~G~~ 130 (243)
..+|++|+-+|+| -|..++..+ .++.+|+.+|.++.....|... ... +. +.... -...|.|+...+.+
T Consensus 68 l~~g~~VLdIG~G-sGy~ta~La-~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~~~~pfD~Iiv~~a~~ 145 (224)
T d1vbfa_ 68 LHKGQKVLEIGTG-IGYYTALIA-EIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAP 145 (224)
T ss_dssp CCTTCEEEEECCT-TSHHHHHHH-HHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBS
T ss_pred hcccceEEEecCC-CCHHHHHHH-HHhcccccccccHHHHHHHHHHHhcccccccccCchhhcchhhhhHHHHHhhcchh
Confidence 3589999999999 455555444 4578999999999877666542 111 11 11111 12369887654444
Q ss_pred hcccHHHHccCCCCeEEEE
Q 037949 131 DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvn 149 (243)
++. ...++.+++||++|.
T Consensus 146 ~ip-~~l~~qLk~GGrLV~ 163 (224)
T d1vbfa_ 146 TLL-CKPYEQLKEGGIMIL 163 (224)
T ss_dssp SCC-HHHHHTEEEEEEEEE
T ss_pred hhh-HHHHHhcCCCCEEEE
Confidence 444 457899999999875
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.08 E-value=0.0034 Score=49.29 Aligned_cols=25 Identities=24% Similarity=0.209 Sum_probs=22.8
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEE
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARV 90 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V 90 (243)
+|+|||+|.+|+.+|..|...|.+|
T Consensus 2 kV~VIGaGi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 2 RVVVIGAGVIGLSTALCIHERYHSV 26 (246)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTT
T ss_pred EEEEECchHHHHHHHHHHHHCCCCc
Confidence 6999999999999999999999753
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.02 E-value=0.086 Score=44.18 Aligned_cols=87 Identities=18% Similarity=0.195 Sum_probs=56.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhc-----------CC-----cc--cC-----HHhhh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTE-----------GI-----PV--LT-----REDVV 117 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~-----------G~-----~~--~~-----~~~~~ 117 (243)
.++++++=+|+| .|..+...++..|+ +++.+|.++.....|... |. +. -+ ..+..
T Consensus 150 ~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~~~~~~~~ 228 (328)
T d1nw3a_ 150 TDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERI 228 (328)
T ss_dssp CTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTSHHHHHHH
T ss_pred CCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccccccccccc
Confidence 578999999999 46666666777887 799999999876544321 11 11 11 22334
Q ss_pred cCCcEEEEccC--Ch---hcccHHHHccCCCCeEEEEe
Q 037949 118 SEAGLFVTTTE--NA---DIIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 118 ~~aDvvi~a~G--~~---~~i~~~~l~~l~~g~~vvnv 150 (243)
.++|+|+..+- .+ ..+. +.+..+||||++|..
T Consensus 229 ~~advi~~~~~~f~~~~~~~l~-e~~r~LKpGg~iv~~ 265 (328)
T d1nw3a_ 229 ANTSVIFVNNFAFGPEVDHQLK-ERFANMKEGGRIVSS 265 (328)
T ss_dssp HHCSEEEECCTTTCHHHHHHHH-HHHTTCCTTCEEEES
T ss_pred CcceEEEEcceecchHHHHHHH-HHHHhCCCCcEEEEe
Confidence 56899875321 11 2243 578889999999974
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=93.91 E-value=0.024 Score=42.74 Aligned_cols=43 Identities=19% Similarity=0.221 Sum_probs=33.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT 105 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~ 105 (243)
..+|++|+.+|||. |..+. .|...|++|+.+|+|+.-+..|..
T Consensus 18 ~~~~~rvLd~GCG~-G~~a~-~la~~G~~V~gvD~S~~~i~~a~~ 60 (201)
T d1pjza_ 18 VVPGARVLVPLCGK-SQDMS-WLSGQGYHVVGAELSEAAVERYFT 60 (201)
T ss_dssp CCTTCEEEETTTCC-SHHHH-HHHHHCCEEEEEEECHHHHHHHHH
T ss_pred CCCCCEEEEecCcC-CHHHH-HHHHcCCceEeecccHHHHHHHHH
Confidence 35899999999993 55444 444579999999999987766654
|
| >d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.84 E-value=0.015 Score=48.21 Aligned_cols=36 Identities=19% Similarity=0.139 Sum_probs=31.4
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh--CCCEEEEEeCCch
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA--VGARVMGTEIDLI 98 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~--~Ga~V~v~d~~~~ 98 (243)
.+..|+|||+||-|+.+|..|+. .|.+|+++|.++.
T Consensus 49 ~~~~~~~~g~g~~g~~~a~~~~~~~~~~~~~~~~~~~~ 86 (311)
T d2gjca1 49 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 86 (311)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEcCCC
Confidence 45679999999999999999984 5999999998764
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.74 E-value=0.057 Score=39.38 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=31.6
Q ss_pred cCcEEEEEcCCh--H---------HHHHHHHHHhCCCEEEEEeCCchh
Q 037949 63 AGKIAVDCGHGD--V---------GRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 63 ~g~~vlViG~G~--I---------G~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.-|+|+|+|.|| | +-.+++.|+..|.++++++.||+.
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~T 53 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPAT 53 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTC
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHh
Confidence 358999999996 4 456889999999999999999874
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=93.71 E-value=0.044 Score=44.84 Aligned_cols=90 Identities=17% Similarity=0.184 Sum_probs=59.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhC--CCEEEEEeCCchhHHHHhh----cCCc-cc-----CHHhhh--cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAV--GARVMGTEIDLICALQALT----EGIP-VL-----TREDVV--SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~--Ga~V~v~d~~~~r~~~a~~----~G~~-~~-----~~~~~~--~~aDvvi~a 126 (243)
..+|++|+=+|+|. |...+..++.. +.+|+.+|.++.....|.+ .|.. .+ +..+.. ..+|.|+..
T Consensus 101 i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~~~~~~~~~D~V~~d 179 (266)
T d1o54a_ 101 VKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLD 179 (266)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEEC
T ss_pred CCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEeccccccccccceeeeEec
Confidence 35899999999996 44444555554 4699999999998766653 2431 11 122211 357888777
Q ss_pred cCChhcccHHHHccCCCCeEEEEec
Q 037949 127 TENADIIMVRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g~~vvnvg 151 (243)
...+.-+-......|||||+++...
T Consensus 180 ~p~p~~~l~~~~~~LKpGG~lv~~~ 204 (266)
T d1o54a_ 180 VPDPWNYIDKCWEALKGGGRFATVC 204 (266)
T ss_dssp CSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHhhcCCCCEEEEEe
Confidence 6666433346788899999998643
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.69 E-value=0.026 Score=42.30 Aligned_cols=64 Identities=11% Similarity=0.132 Sum_probs=41.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHhCCC-------EEEEEeCCchhH-HHHhh----cC-Cc----c---cCHHhhhcCCcEEE
Q 037949 66 IAVDCGH-GDVGRGCAAALKAVGA-------RVMGTEIDLICA-LQALT----EG-IP----V---LTREDVVSEAGLFV 124 (243)
Q Consensus 66 ~vlViG~-G~IG~~~A~~l~~~Ga-------~V~v~d~~~~r~-~~a~~----~G-~~----~---~~~~~~~~~aDvvi 124 (243)
+|.|+|+ |.||..+|..+...+. .+..+|.++... .++.. .. +. + .+..+.++++|+|+
T Consensus 5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvVV 84 (154)
T d5mdha1 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAI 84 (154)
T ss_dssp EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceEEE
Confidence 7999996 9999999998875442 355667665432 11111 11 11 1 23456788999999
Q ss_pred EccCC
Q 037949 125 TTTEN 129 (243)
Q Consensus 125 ~a~G~ 129 (243)
.+.|.
T Consensus 85 itag~ 89 (154)
T d5mdha1 85 LVGSM 89 (154)
T ss_dssp ECCSC
T ss_pred Eeccc
Confidence 88774
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=93.65 E-value=0.095 Score=41.61 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=57.5
Q ss_pred ccCcEEEEEcCC--hHHHHHHHHHHhCCC----EEEEEeCCchhHHHHhhc---------C---Ccc--cCHHh---hhc
Q 037949 62 IAGKIAVDCGHG--DVGRGCAAALKAVGA----RVMGTEIDLICALQALTE---------G---IPV--LTRED---VVS 118 (243)
Q Consensus 62 l~g~~vlViG~G--~IG~~~A~~l~~~Ga----~V~v~d~~~~r~~~a~~~---------G---~~~--~~~~~---~~~ 118 (243)
.+|++|+.+|+| -.-..+++.+...|+ +|+.+|.++.....|.+. + ..+ .+..+ ...
T Consensus 79 ~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~~~~ 158 (223)
T d1r18a_ 79 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNA 158 (223)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGC
T ss_pred CCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccccccc
Confidence 579999999988 355666777777774 899999998765555321 1 111 11111 112
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEE-ec
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCN-IG 151 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvn-vg 151 (243)
..|.|+...+.+. +....++.+++||+++. +|
T Consensus 159 ~fD~Iiv~~a~~~-~p~~l~~~Lk~gG~lV~pvg 191 (223)
T d1r18a_ 159 PYNAIHVGAAAPD-TPTELINQLASGGRLIVPVG 191 (223)
T ss_dssp SEEEEEECSCBSS-CCHHHHHTEEEEEEEEEEES
T ss_pred ceeeEEEEeechh-chHHHHHhcCCCcEEEEEEe
Confidence 4788876654444 43467889999999975 44
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.61 E-value=0.017 Score=50.81 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=32.3
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~ 97 (243)
+.+.+|+|+|+|++|..+++.|...|. ++.++|.|.
T Consensus 35 l~~~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D~ 71 (426)
T d1yovb1 35 LDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 71 (426)
T ss_dssp HHHCCEEEECSSTTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred HhcCeEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 456889999999999999999999999 899998754
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.57 E-value=0.052 Score=39.23 Aligned_cols=37 Identities=14% Similarity=0.091 Sum_probs=31.4
Q ss_pred cCcEEEEEcCCh--H---------HHHHHHHHHhCCCEEEEEeCCchh
Q 037949 63 AGKIAVDCGHGD--V---------GRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 63 ~g~~vlViG~G~--I---------G~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
..++|+|+|.|| | +-.+++.|+..|.++++++.||+.
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeT 50 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPET 50 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTS
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhh
Confidence 358999999996 4 456889999999999999999874
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.54 E-value=0.08 Score=43.68 Aligned_cols=90 Identities=12% Similarity=0.034 Sum_probs=57.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCC-c---c--cCHHhhhcCCcEEEEc----
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----EGI-P---V--LTREDVVSEAGLFVTT---- 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~-~---~--~~~~~~~~~aDvvi~a---- 126 (243)
..+|.+|+=+|||.= ..+...++..|++|+.+++++...+.+.+ .|. + + .+..+.-...|.|+..
T Consensus 60 l~~G~~VLDiGCG~G-~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~fD~i~si~~~e 138 (285)
T d1kpga_ 60 LQPGMTLLDVGCGWG-ATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFE 138 (285)
T ss_dssp CCTTCEEEEETCTTS-HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGG
T ss_pred CCCCCEEEEecCcch-HHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhcccccccceeeehhhh
Confidence 368999999999954 44445666789999999999987654432 332 1 1 1222222357776543
Q ss_pred -cCCh---hcccHHHHccCCCCeEEEEecC
Q 037949 127 -TENA---DIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 127 -~G~~---~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.|.+ ..+ .+.-..|+|||+++.-.+
T Consensus 139 h~~~~~~~~~~-~~~~r~LkpgG~~~l~~i 167 (285)
T d1kpga_ 139 HFGHERYDAFF-SLAHRLLPADGVMLLHTI 167 (285)
T ss_dssp GTCTTTHHHHH-HHHHHHSCTTCEEEEEEE
T ss_pred hcCchhHHHHH-HHHHhhcCCCCcEEEEEE
Confidence 3433 223 345678899999985443
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=93.52 E-value=0.076 Score=40.69 Aligned_cols=67 Identities=10% Similarity=0.088 Sum_probs=42.6
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHh---CCC----EEEEEeCCchhH-HHHh----hcCC-c-------ccCHHhhhcCCc
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKA---VGA----RVMGTEIDLICA-LQAL----TEGI-P-------VLTREDVVSEAG 121 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~---~Ga----~V~v~d~~~~r~-~~a~----~~G~-~-------~~~~~~~~~~aD 121 (243)
+-.+|.|+|+ |.||..++..+.. +|. .+...|.++... .+.. .+.. . ..+..+.++++|
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aD 102 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD 102 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCc
Confidence 3458999997 9999999999875 443 345566665431 1111 1111 1 123566788999
Q ss_pred EEEEccCC
Q 037949 122 LFVTTTEN 129 (243)
Q Consensus 122 vvi~a~G~ 129 (243)
+|+.+.|.
T Consensus 103 vVvi~ag~ 110 (175)
T d7mdha1 103 WALLIGAK 110 (175)
T ss_dssp EEEECCCC
T ss_pred eEEEeecc
Confidence 99988764
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=93.44 E-value=0.068 Score=40.76 Aligned_cols=30 Identities=17% Similarity=0.216 Sum_probs=24.2
Q ss_pred EEEEEcCChHHHHHHHHHHhCC-CEEEEE-eC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG-ARVMGT-EI 95 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G-a~V~v~-d~ 95 (243)
+++|=|+|.||+.+.+.+.... .+|+.+ |.
T Consensus 3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~ 34 (166)
T d1gado1 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDL 34 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCC
Confidence 5899999999999999998775 466554 44
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.43 E-value=0.047 Score=44.57 Aligned_cols=33 Identities=30% Similarity=0.239 Sum_probs=29.6
Q ss_pred cEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 65 KIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 65 ~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
|+|+|+|+ |-||..++..|...|.+|+.+|+..
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~ 34 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARR 34 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCC
Confidence 68999996 4799999999999999999998754
|
| >d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=93.40 E-value=0.056 Score=42.85 Aligned_cols=37 Identities=22% Similarity=0.111 Sum_probs=31.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHh--------------------CCC-EEEEEeCCc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKA--------------------VGA-RVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~--------------------~Ga-~V~v~d~~~ 97 (243)
.+.|++|+|||.|.+++-+|+.|.. .|+ +|.++.+..
T Consensus 36 ~~~gk~VvVIGgGNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg 93 (225)
T d1cjca1 36 DLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 93 (225)
T ss_dssp CTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred cccCceEEEECCchhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcC
Confidence 4689999999999999999999987 477 687776654
|
| >d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Mitochondrial NAD(P)-dependent malic enzyme species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.39 E-value=0.048 Score=45.40 Aligned_cols=106 Identities=9% Similarity=0.052 Sum_probs=66.6
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCC-----------EEEEEeCCch----hH---H----HHhhcCCc--ccCHH
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGA-----------RVMGTEIDLI----CA---L----QALTEGIP--VLTRE 114 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-----------~V~v~d~~~~----r~---~----~a~~~G~~--~~~~~ 114 (243)
+..+...+++|.|+|.-|.+++..+...++ +++++|.... |. . .......+ ..++.
T Consensus 20 gk~l~d~kiv~~GAGsAg~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~~r~~~~~~~k~~~a~~~~~~~~~~L~ 99 (294)
T d1pj3a1 20 SKPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFE 99 (294)
T ss_dssp CCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHH
T ss_pred CCCHHHcEEEEECccHHHHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccCCCCcccHHHHHHhhccccccchhHHH
Confidence 446788999999999888888887765543 4999987432 10 0 00000100 12456
Q ss_pred hhhc--CCcEEEEccCChhcccHHHHcc---CCCCeEEEEecCCC--CCCChhHHHH
Q 037949 115 DVVS--EAGLFVTTTENADIIMVRHMKQ---MKNAAIVCNIGHFD--NEIDMLDLEA 164 (243)
Q Consensus 115 ~~~~--~aDvvi~a~G~~~~i~~~~l~~---l~~g~~vvnvg~~~--~~id~~~l~~ 164 (243)
++++ ..|+++-++|.+.+++.+.++. +.+.-+|.-.+-.. .+........
T Consensus 100 e~i~~~kptvliG~S~~~g~ft~evi~~Ma~~~~~PIIFaLSNPt~~~e~~~~~a~~ 156 (294)
T d1pj3a1 100 DAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYT 156 (294)
T ss_dssp HHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCSSGGGCSCCHHHHHH
T ss_pred HHHHhcCCceEEEecCCCCcCCHHHHHHHHhcCCCcEEEEccCCCCcCCcCHHHHHh
Confidence 6654 7899999998888888777654 45777777666553 2334444443
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.28 E-value=0.029 Score=44.29 Aligned_cols=42 Identities=19% Similarity=0.099 Sum_probs=33.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT 105 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~ 105 (243)
.+|.+|+.+|||. |+. +..|...|++|+.+|.++...+.+..
T Consensus 44 ~~~~rvLd~GCG~-G~~-a~~LA~~G~~V~gvD~S~~ai~~a~~ 85 (229)
T d2bzga1 44 KSGLRVFFPLCGK-AVE-MKWFADRGHSVVGVEISELGIQEFFT 85 (229)
T ss_dssp CCSCEEEETTCTT-CTH-HHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEeCCCC-cHH-HHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence 4788999999996 655 44555689999999999987766553
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=93.24 E-value=0.043 Score=44.57 Aligned_cols=90 Identities=10% Similarity=0.123 Sum_probs=55.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCCc----c--cCHHhh-h--cCCcEEEEcc-
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----EGIP----V--LTREDV-V--SEAGLFVTTT- 127 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~~----~--~~~~~~-~--~~aDvvi~a~- 127 (243)
-+|.+|+=+|||. |..+...++..|++|+.+|+++..+..|.. .|.. + .+..+. + ...|+|+..-
T Consensus 66 ~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD~V~~~~~ 144 (282)
T d2o57a1 66 QRQAKGLDLGAGY-GGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 144 (282)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCC-cHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccccccccchhhccch
Confidence 4799999999994 444444455569999999999987655443 2321 1 122221 1 2478887542
Q ss_pred ----CChhcccHHHHccCCCCeEEEEecC
Q 037949 128 ----ENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 128 ----G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
..+..+-.+....|||||+++....
T Consensus 145 l~h~~d~~~~l~~~~~~LkpgG~l~~~~~ 173 (282)
T d2o57a1 145 FLHSPDKLKVFQECARVLKPRGVMAITDP 173 (282)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 2232222356788899999886543
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=93.14 E-value=0.05 Score=40.63 Aligned_cols=65 Identities=11% Similarity=0.008 Sum_probs=39.2
Q ss_pred cEEEEEcC-ChHHHHHHHHHHhCCC-E------EEEEeCCc--hhHHHHh---hcCC----c-c---cCHHhhhcCCcEE
Q 037949 65 KIAVDCGH-GDVGRGCAAALKAVGA-R------VMGTEIDL--ICALQAL---TEGI----P-V---LTREDVVSEAGLF 123 (243)
Q Consensus 65 ~~vlViG~-G~IG~~~A~~l~~~Ga-~------V~v~d~~~--~r~~~a~---~~G~----~-~---~~~~~~~~~aDvv 123 (243)
-+|.|+|+ |.||..++..+...+. . ..+.+.+. ..+.... .... . + .+..+.++++|+|
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~advV 84 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYA 84 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccccEE
Confidence 47999997 9999999999987553 1 22233332 2221111 1111 0 0 1245678899999
Q ss_pred EEccCC
Q 037949 124 VTTTEN 129 (243)
Q Consensus 124 i~a~G~ 129 (243)
+.+.|.
T Consensus 85 iitaG~ 90 (154)
T d1y7ta1 85 LLVGAA 90 (154)
T ss_dssp EECCCC
T ss_pred EeecCc
Confidence 988764
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=93.12 E-value=0.039 Score=43.97 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=29.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 66 IAVDCGH-GDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+|+|+|+ |-||..++..|...|.+|+.+|+++
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~ 35 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD 35 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence 5999998 7999999999999999999998764
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=93.09 E-value=0.034 Score=38.89 Aligned_cols=36 Identities=11% Similarity=0.116 Sum_probs=30.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+|+|+|.|.-|.-+|..+...+.+|++..+.
T Consensus 29 ~f~gK~VlVVG~g~Sa~dia~~l~~~ak~v~~~~~r 64 (107)
T d2gv8a2 29 LFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLL 64 (107)
T ss_dssp GGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECT
T ss_pred hcCCCeEEEECCCCCHHHHHHHHHHhcCEEEEEEec
Confidence 579999999999999999999998888776655443
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.06 E-value=0.043 Score=42.36 Aligned_cols=63 Identities=11% Similarity=0.074 Sum_probs=40.1
Q ss_pred cEEEEEcC-ChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCCcccCHHhh----hcCCcEEEEccCC
Q 037949 65 KIAVDCGH-GDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGIPVLTREDV----VSEAGLFVTTTEN 129 (243)
Q Consensus 65 ~~vlViG~-G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~~~~~~~~~----~~~aDvvi~a~G~ 129 (243)
|+|+|+|+ |-||+.+++.|...|. +|++..+++... .. ..-....+..+. ....|.++.|.|.
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-~~-~~~~~~~d~~~~~~~~~~~~d~vi~~~g~ 72 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-HP-RLDNPVGPLAELLPQLDGSIDTAFCCLGT 72 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-CT-TEECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-cc-cccccccchhhhhhccccchheeeeeeee
Confidence 89999998 7999999999999997 566555444321 00 000112233222 2357999998764
|
| >d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GidA-like domain: GidA-related protein TTHA1897 species: Thermus thermophilus [TaxId: 274]
Probab=93.02 E-value=0.056 Score=43.42 Aligned_cols=32 Identities=28% Similarity=0.149 Sum_probs=29.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.|+|||+|+-|...|.++...|+++.+++.+.
T Consensus 4 DVIVIGgG~AG~eAA~~aAR~G~ktllit~~~ 35 (230)
T d2cula1 4 QVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 35 (230)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cEEEECcCHHHHHHHHHHHHCCCcEEEEEecc
Confidence 38999999999999999999999999987664
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=92.97 E-value=0.062 Score=41.92 Aligned_cols=85 Identities=14% Similarity=0.113 Sum_probs=55.8
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-c--cCHHhh-h--cCCcEEEEccC------C
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-V--LTREDV-V--SEAGLFVTTTE------N 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~--~~~~~~-~--~~aDvvi~a~G------~ 129 (243)
.++++|+=+||| -|..+-.. ...|++|+.+|+++..+..|.+.+.. . .+..+. . ...|+|+..-. .
T Consensus 41 ~~~~~vLDiGcG-~G~~~~~l-~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~~~~~~fD~ii~~~~~~~~~~d 118 (246)
T d2avna1 41 KNPCRVLDLGGG-TGKWSLFL-QERGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 118 (246)
T ss_dssp CSCCEEEEETCT-TCHHHHHH-HTTTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCCCEEEEECCC-Cchhcccc-cccceEEEEeecccccccccccccccccccccccccccccccccceeeecchhhhhhh
Confidence 367899999999 45555444 45799999999999988777765542 1 122221 1 35788875422 2
Q ss_pred h-hcccHHHHccCCCCeEEEE
Q 037949 130 A-DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 130 ~-~~i~~~~l~~l~~g~~vvn 149 (243)
+ .++ .+..+.++|||+++.
T Consensus 119 ~~~~l-~~i~r~Lk~gG~~ii 138 (246)
T d2avna1 119 KDKAF-SEIRRVLVPDGLLIA 138 (246)
T ss_dssp HHHHH-HHHHHHEEEEEEEEE
T ss_pred HHHHH-HHHHhhcCcCcEEEE
Confidence 2 223 345678899998875
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=92.85 E-value=0.053 Score=44.01 Aligned_cols=88 Identities=15% Similarity=0.038 Sum_probs=56.0
Q ss_pred cccCcEEEEEcCChHH--HHHHHHHHhCCCEEEEEeCCchhHHHHhhc----C-Cc-c----cCHHhhh--cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVG--RGCAAALKAVGARVMGTEIDLICALQALTE----G-IP-V----LTREDVV--SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG--~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~----G-~~-~----~~~~~~~--~~aDvvi~a 126 (243)
..+|++|+=+|+|.=+ ..+|+.+ .-+.+|+.+|.++..++.|.+. + .. + -+..+.+ ..+|.|+.-
T Consensus 83 i~pG~rVLEiG~GsG~lt~~la~~v-~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~~~~~fD~V~ld 161 (250)
T d1yb2a1 83 LRPGMDILEVGVGSGNMSSYILYAL-NGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIAD 161 (250)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHH-TTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEEC
T ss_pred CCCcCEEEEeeeeCcHHHHHHHHHh-CCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecccccceeeeeeec
Confidence 3689999999999532 3333333 2345899999999887666642 1 11 1 1223322 247888765
Q ss_pred cCChh-cccHHHHccCCCCeEEEEe
Q 037949 127 TENAD-IIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 127 ~G~~~-~i~~~~l~~l~~g~~vvnv 150 (243)
...+. .+. ...+.+||||+++..
T Consensus 162 ~p~p~~~l~-~~~~~LKpGG~lv~~ 185 (250)
T d1yb2a1 162 IPDPWNHVQ-KIASMMKPGSVATFY 185 (250)
T ss_dssp CSCGGGSHH-HHHHTEEEEEEEEEE
T ss_pred CCchHHHHH-HHHHhcCCCceEEEE
Confidence 55543 454 578889999999863
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.71 E-value=0.072 Score=43.74 Aligned_cols=31 Identities=23% Similarity=0.111 Sum_probs=28.4
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
|+|+|+|+. -||..++..|...|.+|+++|.
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~ 33 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 789999975 6999999999999999999985
|
| >d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.69 E-value=0.083 Score=41.49 Aligned_cols=37 Identities=27% Similarity=0.253 Sum_probs=30.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHH--------------------hCCC-EEEEEeCCc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALK--------------------AVGA-RVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~--------------------~~Ga-~V~v~d~~~ 97 (243)
.+.|++|+|||.|.+++-+|+.+. ..|+ +|.++-+..
T Consensus 36 ~~~gk~VvVIGgGNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg 93 (216)
T d1lqta1 36 DLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG 93 (216)
T ss_dssp CCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred cccCceEEEECCCchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECC
Confidence 467999999999999999999886 5777 677775543
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=92.68 E-value=0.051 Score=45.19 Aligned_cols=65 Identities=20% Similarity=0.203 Sum_probs=44.5
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH--H-HhhcCCcc-----cC----HHhhhcCCcEEEEcc
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL--Q-ALTEGIPV-----LT----REDVVSEAGLFVTTT 127 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~--~-a~~~G~~~-----~~----~~~~~~~aDvvi~a~ 127 (243)
+-|+|+|+|+ |.||..++..|...|.+|++.-+++.... . ....|+++ .+ ++.++.++|+++...
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~ 79 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT 79 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeec
Confidence 3589999996 79999999999999999999877655421 1 11124432 12 233557888877653
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=92.68 E-value=0.06 Score=44.46 Aligned_cols=30 Identities=30% Similarity=0.330 Sum_probs=28.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
.|+|||.|+-|..+|..|...|.+|+|.|.
T Consensus 6 DviIVGsG~aG~v~A~~La~~G~kVlvLEa 35 (379)
T d2f5va1 6 DVVIVGSGPIGCTYARELVGAGYKVAMFDI 35 (379)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cEEEECcCHHHHHHHHHHhhCCCeEEEEec
Confidence 499999999999999999999999999985
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=92.59 E-value=0.14 Score=38.95 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=24.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCC-CEEEEE-eCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG-ARVMGT-EID 96 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G-a~V~v~-d~~ 96 (243)
+|+|=|+|.||+.+.+.+.... .+|+.+ |+.
T Consensus 3 kIgINGFGRIGR~v~R~~~~~~~~~ivaINd~~ 35 (169)
T d1u8fo1 3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPF 35 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSS
T ss_pred EEEEECCcHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 6899999999999999887665 576554 643
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=92.13 E-value=0.065 Score=44.66 Aligned_cols=30 Identities=27% Similarity=0.209 Sum_probs=28.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
.|+|||.|.-|..+|.+|...|.+|++.|.
T Consensus 4 ~VIVVGsG~aG~v~A~rLaeaG~~VlvLEa 33 (367)
T d1n4wa1 4 PAVVIGTGYGAAVSALRLGEAGVQTLMLEM 33 (367)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred eEEEeCcCHHHHHHHHHHHHCcCeEEEEec
Confidence 489999999999999999999999999986
|
| >d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=92.01 E-value=0.072 Score=41.24 Aligned_cols=30 Identities=23% Similarity=0.139 Sum_probs=26.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC-EEEEEeC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA-RVMGTEI 95 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~ 95 (243)
.++|||+||-|+.+|..++..|. +|.+.|.
T Consensus 5 DviIIG~GpaGl~aA~~aa~~g~k~V~iie~ 35 (238)
T d1aoga1 5 DLVVIGAGSGGLEAAWNAATLYKKRVAVIDV 35 (238)
T ss_dssp SEEEECCSHHHHHHHHHHHHTSCCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCEEEEEEe
Confidence 38999999999999999998887 6888875
|
| >d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Archaeon Pyrococcus abyssi [TaxId: 29292]
Probab=91.92 E-value=0.77 Score=33.60 Aligned_cols=99 Identities=17% Similarity=0.129 Sum_probs=64.4
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCch-----hHHHHhhcCCc---ccCHHhhhcCCcEEEEccCC-
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDLI-----CALQALTEGIP---VLTREDVVSEAGLFVTTTEN- 129 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~~-----r~~~a~~~G~~---~~~~~~~~~~aDvvi~a~G~- 129 (243)
+.|.+++++|= +.+....+..+..+|++++++-+... ....+...+.. ..+++++++++|+++...-.
T Consensus 2 l~gl~i~~vGD~~~srV~~Sli~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~av~~aDvvy~~~~~~ 81 (157)
T d1ml4a2 2 IDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQK 81 (157)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCG
T ss_pred cCCCEEEEEcCCccChHHHHHHHHHHhcCCcEEEEccchhhcchHHHHHHHhhcccceeecCHHHhhccCcEEEeecccc
Confidence 57899999997 57999999999999999988754322 12233334433 34678889999999865311
Q ss_pred --------------hhcccHHHHccCCCCeEEEEecCCCCCCChh
Q 037949 130 --------------ADIIMVRHMKQMKNAAIVCNIGHFDNEIDML 160 (243)
Q Consensus 130 --------------~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~ 160 (243)
.-.++.+.+..+++.+++.-...-+.||+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~mHplPRg~EI~~~ 126 (157)
T d1ml4a2 82 ERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLPRVDEIHPE 126 (157)
T ss_dssp GGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSCCSSSBCGG
T ss_pred ccccchhhHHhhcchhccCHHHHhhcCCCeEEecCCCcCceeccc
Confidence 1114444566667777666544433455544
|
| >d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.82 E-value=0.07 Score=41.99 Aligned_cols=32 Identities=22% Similarity=0.121 Sum_probs=26.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCC---CEEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG---ARVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G---a~V~v~d~~~ 97 (243)
+|+|||+||-|+.+|.++..+| .+|.++|.+.
T Consensus 3 ~viVIG~GpaG~~aA~~aa~~~~~~~~V~liEk~~ 37 (233)
T d1xdia1 3 RIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 37 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCCCEEEEEecCC
Confidence 6999999999999998876555 5789998653
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.74 E-value=0.36 Score=39.31 Aligned_cols=88 Identities=15% Similarity=0.076 Sum_probs=57.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCCc--c----cCHHhhhcCCcEEEEc----
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----EGIP--V----LTREDVVSEAGLFVTT---- 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~~--~----~~~~~~~~~aDvvi~a---- 126 (243)
..+|++|+=||+|+=|.+ ...++..|++|+.+|+|+.....|.+ .|.. + .+..+.-...|.|+..
T Consensus 50 l~~g~~VLDiGCG~G~~a-~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~~~~~fD~i~si~~~e 128 (280)
T d2fk8a1 50 LKPGMTLLDIGCGWGTTM-RRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFE 128 (280)
T ss_dssp CCTTCEEEEESCTTSHHH-HHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGG
T ss_pred CCCCCEEEEecCCchHHH-HHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhhhhccchhhhhHhhHHH
Confidence 358999999999965543 44566779999999999987655543 3431 1 1222333457877543
Q ss_pred -cCCh---hcccHHHHccCCCCeEEEEe
Q 037949 127 -TENA---DIIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 127 -~G~~---~~i~~~~l~~l~~g~~vvnv 150 (243)
.+.+ ..+. ..-+.|||||+++.-
T Consensus 129 h~~~~~~~~~f~-~i~~~LkpgG~~~i~ 155 (280)
T d2fk8a1 129 HFGHENYDDFFK-RCFNIMPADGRMTVQ 155 (280)
T ss_dssp GTCGGGHHHHHH-HHHHHSCTTCEEEEE
T ss_pred HhhhhhHHHHHH-HHHhccCCCceEEEE
Confidence 3333 2243 456888999999853
|
| >d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Adenylylsulfate reductase A subunit species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.71 E-value=0.076 Score=43.88 Aligned_cols=33 Identities=24% Similarity=0.111 Sum_probs=27.5
Q ss_pred cEEEEEcCChHHHHHHHHHH----hCCCEEEEEeCCc
Q 037949 65 KIAVDCGHGDVGRGCAAALK----AVGARVMGTEIDL 97 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~----~~Ga~V~v~d~~~ 97 (243)
-.|+|||+|+-|+.+|..|. ..|++|+++|..+
T Consensus 22 ~DVlIIG~G~AGl~AA~~aa~~~~~~G~~V~vieK~~ 58 (356)
T d1jnra2 22 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 58 (356)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred cCEEEECCCHHHHHHHHHHHHHHHhCcCEEEEEeCCC
Confidence 56999999999998887764 4799999998643
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.68 E-value=0.025 Score=42.79 Aligned_cols=64 Identities=16% Similarity=0.058 Sum_probs=40.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCCcccCHHhhhc--CCcEEEEccCCh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGIPVLTREDVVS--EAGLFVTTTENA 130 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~--~aDvvi~a~G~~ 130 (243)
+|+|+|+|.+|...+..++...- .+.+++.+..+. .+...+....+.++++. +.|+|+.||.+.
T Consensus 9 kv~iIG~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~l~~~~iD~V~I~tp~~ 76 (172)
T d1lc0a1 9 GVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-LGSLDEVRQISLEDALRSQEIDVAYICSESS 76 (172)
T ss_dssp EEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-CCEETTEEBCCHHHHHHCSSEEEEEECSCGG
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCCcEEEEEeccchHH-HHHhhccCcCCHHHHHhCCCcchhhhccccc
Confidence 79999999999998888775432 344555433321 12222333456777664 678998887653
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.60 E-value=0.38 Score=39.44 Aligned_cols=89 Identities=11% Similarity=0.039 Sum_probs=56.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh----hcCCc-c-----cCHHhhhcCCcEEEEc----
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL----TEGIP-V-----LTREDVVSEAGLFVTT---- 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~----~~G~~-~-----~~~~~~~~~aDvvi~a---- 126 (243)
..+|++|+=+|||.=|. +...++..|++|+.+++|+.....+. ..|.. . .+....-...|.|+..
T Consensus 59 l~~G~~VLDiGCG~G~~-~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~fD~i~sie~~e 137 (291)
T d1kpia_ 59 LEPGMTLLDIGCGWGST-MRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFE 137 (291)
T ss_dssp CCTTCEEEEETCTTSHH-HHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGG
T ss_pred CCCCCEEEEecCcchHH-HHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcccccccccceEeechhHH
Confidence 36899999999996554 44566678999999999998654433 33432 1 1222222358887643
Q ss_pred -cCCh----------hcccHHHHccCCCCeEEEEec
Q 037949 127 -TENA----------DIIMVRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 127 -~G~~----------~~i~~~~l~~l~~g~~vvnvg 151 (243)
.+.+ ..+ ...-+.|||||+++.-.
T Consensus 138 H~~~~~~~~~~~~~~~~f-~~i~~~LkpgG~~~l~~ 172 (291)
T d1kpia_ 138 HFADGAGDAGFERYDTFF-KKFYNLTPDDGRMLLHT 172 (291)
T ss_dssp GTTCCSSCCSTTHHHHHH-HHHHHTSCTTCEEEEEE
T ss_pred hcchhhhhhHHHHHHHHH-HHHHHhCCCCCceEEEE
Confidence 3321 223 23567889999998644
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=91.56 E-value=0.093 Score=40.18 Aligned_cols=22 Identities=27% Similarity=0.252 Sum_probs=19.2
Q ss_pred EEEEEcCChHHHHHHHHHHhCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG 87 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G 87 (243)
+|+|=|+|.||+.+.+.+...+
T Consensus 3 kigINGfGRIGR~v~R~~~~~~ 24 (173)
T d1obfo1 3 RVAINGYGRIGRNILRAHYEGG 24 (173)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEEECCcHHHHHHHHHHHhCC
Confidence 6899999999999999887544
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=91.29 E-value=0.091 Score=43.82 Aligned_cols=30 Identities=27% Similarity=0.200 Sum_probs=28.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
.|+|||.|.-|..+|..|...|.+|++.|.
T Consensus 9 dvIVVGsG~aG~v~A~rLaeaG~~VlvLEa 38 (370)
T d3coxa1 9 PALVIGSGYGGAVAALRLTQAGIPTQIVEM 38 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 599999999999999999999999999985
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=91.29 E-value=0.36 Score=37.43 Aligned_cols=63 Identities=21% Similarity=0.307 Sum_probs=40.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcC--Cc--ccCHHhhhcCCcEEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEG--IP--VLTREDVVSEAGLFVT 125 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G--~~--~~~~~~~~~~aDvvi~ 125 (243)
.+.|++|+=+|+|.=.+++ .+...|+ +|+.+|.|+..+..|...- .+ ..+..+.-...|+|+.
T Consensus 46 dl~Gk~VLDlGcGtG~l~i--~a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~~l~~~fD~Vi~ 113 (197)
T d1ne2a_ 46 NIGGRSVIDAGTGNGILAC--GSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYDTWIM 113 (197)
T ss_dssp SSBTSEEEEETCTTCHHHH--HHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEEEEEE
T ss_pred CCCCCEEEEeCCCCcHHHH--HHHHcCCCcccccccCHHHHHHHHHccccccEEEEehhhcCCcceEEEe
Confidence 4689999999999522332 3445776 7999999998776665432 12 1233333346787764
|
| >d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=91.11 E-value=0.69 Score=33.95 Aligned_cols=99 Identities=17% Similarity=0.094 Sum_probs=64.3
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCch---hHHHHhhcCCc---ccCHHhhhcCCcEEEEcc-C---
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLI---CALQALTEGIP---VLTREDVVSEAGLFVTTT-E--- 128 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~---r~~~a~~~G~~---~~~~~~~~~~aDvvi~a~-G--- 128 (243)
+.|.+++++|=+ .+....+..+..+|++++++-+.+. ........|.. ..++.++++++|+|.... .
T Consensus 1 l~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aDvvy~~~~q~~~ 80 (153)
T d1pg5a2 1 IDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKER 80 (153)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTT
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHHcCCeeEEEecccccccchhhcccCCCeEEEEeCHHHHhhcCCeEEEeeeeehh
Confidence 368999999965 4999999999999998655422211 11122233443 236788899999997531 1
Q ss_pred -----------ChhcccHHHHccCCCCeEEEEecCCCCCCChh
Q 037949 129 -----------NADIIMVRHMKQMKNAAIVCNIGHFDNEIDML 160 (243)
Q Consensus 129 -----------~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~ 160 (243)
..--++.+.++.++++++|.-.+.-..||+.+
T Consensus 81 ~~~~~~~~~~~~~y~v~~~~l~~~~~~~i~mH~LPR~~EI~~~ 123 (153)
T d1pg5a2 81 FVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLPRVNEIDRK 123 (153)
T ss_dssp SSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSCCSSSBCGG
T ss_pred ccchhHHHHHHHhhhhhHHHHhccCCCeEEecCCCCcCCcchh
Confidence 01126666778888998888666533456554
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=91.08 E-value=0.12 Score=43.26 Aligned_cols=33 Identities=30% Similarity=0.289 Sum_probs=28.6
Q ss_pred cEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 65 KIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 65 ~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
|.|+|+| .|-||..++..|...|.+|+++|+.+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~ 35 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA 35 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 7899999 55799999999999999999998843
|
| >d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.93 E-value=0.12 Score=40.26 Aligned_cols=32 Identities=22% Similarity=0.190 Sum_probs=27.4
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA--RVMGTEID 96 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~ 96 (243)
.+++|+|+|.+|..+|..|+..|. +|++++.+
T Consensus 5 ~~~vIvG~G~aG~~~A~~Lr~~~~~~~I~li~~e 38 (213)
T d1m6ia1 5 VPFLLIGGGTAAFAAARSIRARDPGARVLIVSED 38 (213)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 568999999999999999998775 78888654
|
| >d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: L-aspartate oxidase species: Escherichia coli [TaxId: 562]
Probab=90.93 E-value=0.088 Score=42.91 Aligned_cols=33 Identities=18% Similarity=0.096 Sum_probs=28.6
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
-.|+|+|+|+-|+.+|..++..| +|+++|..+.
T Consensus 8 ~DVvVVG~G~AGl~AA~~a~~~g-~V~llEK~~~ 40 (305)
T d1chua2 8 CDVLIIGSGAAGLSLALRLADQH-QVIVLSKGPV 40 (305)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTS-CEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHhhcCC-CEEEEECCCC
Confidence 35999999999999999998777 9999988653
|
| >d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Mitochondrial NAD(P)-dependent malic enzyme species: Pig roundworm (Ascaris suum) [TaxId: 6253]
Probab=90.91 E-value=0.14 Score=42.68 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=63.7
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhC----CC-------EEEEEeCCchhH-----------HHHhhcCCcccCHHhh
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAV----GA-------RVMGTEIDLICA-----------LQALTEGIPVLTREDV 116 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~----Ga-------~V~v~d~~~~r~-----------~~a~~~G~~~~~~~~~ 116 (243)
+..+...+++|+|+|.-|.+++..+... |. +++++|+...-. ..+... .+..++.++
T Consensus 20 gk~l~d~kivi~GAGaAg~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~Glv~~~r~d~~~~k~~~a~~~-~~~~~l~~~ 98 (308)
T d1o0sa1 20 KKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDM-PETTSILEV 98 (308)
T ss_dssp CCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCBSS-CCCCCHHHH
T ss_pred CCCHHHcEEEEECcCHHHHHHHHHHHHHHHhcCCchhhhhceEEEEeCCCCccCCCcccCHHHHHHHHhc-ccCCcHHHH
Confidence 4467889999999998887777776543 42 489988653211 001000 011234454
Q ss_pred hc--CCcEEEEccCChhcccHHHHccCC---CCeEEEEecCCCC--CCChhHHHH
Q 037949 117 VS--EAGLFVTTTENADIIMVRHMKQMK---NAAIVCNIGHFDN--EIDMLDLEA 164 (243)
Q Consensus 117 ~~--~aDvvi~a~G~~~~i~~~~l~~l~---~g~~vvnvg~~~~--~id~~~l~~ 164 (243)
++ ..++++-+++.+++++.+.++.|. +..+|.-.+-... +....+...
T Consensus 99 i~~~kptvliG~s~~~g~ft~evv~~Ma~~~~~PIIFaLSNPtp~~E~~~eda~~ 153 (308)
T d1o0sa1 99 IRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNPTSKAECTAEEAYT 153 (308)
T ss_dssp HHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHH
T ss_pred HhccccccEEecccccCCCCHHHHHHHHhhCCCcEEEEccCCCCCCCCCHHHHHh
Confidence 43 457888898888888887776663 6777776665543 334444433
|
| >d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Succinate dehydogenase species: Escherichia coli [TaxId: 562]
Probab=90.88 E-value=0.069 Score=44.29 Aligned_cols=33 Identities=21% Similarity=0.124 Sum_probs=30.2
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.|+|||+|+-|+.+|..+...|++|++++..+.
T Consensus 9 DVlVVG~G~AGl~AAl~aa~~G~~V~lleK~~~ 41 (330)
T d1neka2 9 DAVVIGAGGAGMRAALQISQSGQTCALLSKVFP 41 (330)
T ss_dssp SCEEECCSHHHHHHHHHHHHTTCCCEEECSSCG
T ss_pred CEEEECcCHHHHHHHHHHHHcCCeEEEEeCCCC
Confidence 599999999999999999999999999987654
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=90.87 E-value=0.24 Score=37.59 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=23.9
Q ss_pred EEEEEcCChHHHHHHHHHHhC---CCEEEEE-eCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAV---GARVMGT-EID 96 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~---Ga~V~v~-d~~ 96 (243)
+++|=|+|.||+.+.+.+... ..+|+.+ |+.
T Consensus 2 kIgINGfGRIGR~v~R~~~~~~~~~i~vvaINd~~ 36 (169)
T d1hdgo1 2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLT 36 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSS
T ss_pred EEEEECCChHHHHHHHHHHhccCCCEEEEEeccCc
Confidence 689999999999999988753 3565544 654
|
| >d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Homoserine dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.85 E-value=0.48 Score=35.49 Aligned_cols=84 Identities=20% Similarity=0.124 Sum_probs=47.9
Q ss_pred EEEEEcCChHHHHHHHHHHhCC--C--EEEE-EeCCchh-------------HHHHhh-cCCcccCHHh---h---hcCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG--A--RVMG-TEIDLIC-------------ALQALT-EGIPVLTRED---V---VSEA 120 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G--a--~V~v-~d~~~~r-------------~~~a~~-~G~~~~~~~~---~---~~~a 120 (243)
+|+++|+|.||..+++.+.... . +|.. .|.+... ...... ......+.++ . ....
T Consensus 6 ~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (168)
T d1ebfa1 6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPKP 85 (168)
T ss_dssp EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTCSSC
T ss_pred EEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhcccccccHHHHHHHhccCCCc
Confidence 6899999999999999888643 3 3322 2321110 001111 1111112211 1 1357
Q ss_pred cEEEEccCChhcccHHHHccCCCCeEEEEe
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g~~vvnv 150 (243)
|++++|++..+... ...+.++.|..||.+
T Consensus 86 ~vivd~t~~~~~~~-~~~~aL~~G~hVVTA 114 (168)
T d1ebfa1 86 VILVDNTSSAYIAG-FYTKFVENGISIATP 114 (168)
T ss_dssp EEEEECSCCHHHHT-THHHHHHTTCEEECC
T ss_pred eEEEEecCChHHHH-HHHHHHHcCCeEEec
Confidence 89999998876553 345667788888864
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=90.85 E-value=0.25 Score=38.23 Aligned_cols=31 Identities=26% Similarity=0.273 Sum_probs=23.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC-----EEE-EEeCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA-----RVM-GTEID 96 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga-----~V~-v~d~~ 96 (243)
+|+|=|+|.||+.+.+.+-..+. +|+ +.|.+
T Consensus 4 kigINGFGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~ 40 (190)
T d1k3ta1 4 KVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMN 40 (190)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCBTTTEEEEEEEESC
T ss_pred EEEEECCChHHHHHHHHHHHcCCCCCCeEEEEEecCC
Confidence 69999999999999998765542 443 45664
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=90.75 E-value=0.3 Score=36.87 Aligned_cols=31 Identities=19% Similarity=0.036 Sum_probs=24.3
Q ss_pred EEEEEcCChHHHHHHHHHHhCC-CEEEEE-eCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG-ARVMGT-EID 96 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G-a~V~v~-d~~ 96 (243)
+|+|=|+|.||+.+.+.+.... .+|+.+ |+.
T Consensus 2 kigINGfGRIGR~v~R~~~~~~~~~iv~INd~~ 34 (166)
T d2b4ro1 2 KLGINGFGRIGRLVFRAAFGRKDIEVVAINDPF 34 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECTT
T ss_pred eEEEECCCHHHHHHHHHHhhCCCcEEEEECCCC
Confidence 6899999999999999998654 466554 543
|
| >d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=90.53 E-value=0.089 Score=41.18 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=27.8
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~ 97 (243)
.|+|||+||-|+.+|..+..+|. +|.++|..+
T Consensus 5 DvvVIG~GpAG~~aAi~aa~~g~k~V~vie~~~ 37 (240)
T d1feca1 5 DLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQK 37 (240)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCCCEEEEESCS
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCEEEEEEEec
Confidence 48999999999999999999887 688888654
|
| >d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
Probab=90.14 E-value=0.25 Score=37.64 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=23.9
Q ss_pred EEEEEcCChHHHHHHHHHHhCC-CEEEEE-eCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG-ARVMGT-EID 96 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G-a~V~v~-d~~ 96 (243)
+++|=|+|.||+.+.+.+.... .+|+.+ |+.
T Consensus 3 kIgINGfGRIGR~v~R~~l~~~~~~ivaINd~~ 35 (171)
T d3cmco1 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDLT 35 (171)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhhCCCcEEEEEcCCC
Confidence 6899999999999999887654 465554 543
|
| >d1mv8a3 c.26.3.1 (A:301-436) GDP-mannose 6-dehydrogenase, GDP-binding domain {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain family: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain domain: GDP-mannose 6-dehydrogenase, GDP-binding domain species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.12 E-value=1 Score=32.09 Aligned_cols=87 Identities=10% Similarity=0.041 Sum_probs=58.9
Q ss_pred ccCcEEEEEcCC--h--------HHHHHHHHHHhCCCEEEEEeCCchhH------HHHhhc-----CC-cccCHHhhhcC
Q 037949 62 IAGKIAVDCGHG--D--------VGRGCAAALKAVGARVMGTEIDLICA------LQALTE-----GI-PVLTREDVVSE 119 (243)
Q Consensus 62 l~g~~vlViG~G--~--------IG~~~A~~l~~~Ga~V~v~d~~~~r~------~~a~~~-----G~-~~~~~~~~~~~ 119 (243)
+.+++|+|+|.. + -...++..|...|++|.++|+.-... ...... +. -..++.+++.+
T Consensus 11 ~~~kkI~ilGlafK~~t~D~R~Sps~~li~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i~~ 90 (136)
T d1mv8a3 11 HDTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVAS 90 (136)
T ss_dssp SSCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHH
T ss_pred cCCCEEEEEEEEECCCCcchhcCHHHHHHHHHhhhhccccccCCCCCHHHHhhhhhhhhhhccccccceeehhhhhhhhh
Confidence 568999999987 2 67789999999999999997632110 000000 11 13467788899
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEe
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnv 150 (243)
+|+++-++..+... +....++++..|+..
T Consensus 91 ~D~ivi~t~h~~f~--~l~~~~~~~~~I~D~ 119 (136)
T d1mv8a3 91 SDVLVLGNGDELFV--DLVNKTPSGKKLVDL 119 (136)
T ss_dssp CSEEEECSCCGGGH--HHHHSCCTTCEEEES
T ss_pred ceEEEEEeCCHHHH--HHHHHhcCCCEEEEC
Confidence 99999998777643 234456667777763
|
| >d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=90.04 E-value=0.22 Score=35.65 Aligned_cols=37 Identities=14% Similarity=0.002 Sum_probs=33.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
..+||+|+|+|.|..+..-|..|.....+|+++-+.+
T Consensus 24 ~~~~k~V~VvGgGdsA~e~A~~L~~~a~~V~li~r~~ 60 (126)
T d1trba2 24 FYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 60 (126)
T ss_dssp GGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred HhCCCEEEEECCCHHHHHHHHHHhhcCCcEEEEeecc
Confidence 4689999999999999999999999988999986544
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.97 E-value=0.17 Score=42.46 Aligned_cols=31 Identities=19% Similarity=0.123 Sum_probs=28.2
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEe
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTE 94 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d 94 (243)
|++|+|+|+. -||..+++.|...|.+|+++|
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD 32 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD 32 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence 7899999975 699999999999999999998
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.81 E-value=0.29 Score=40.46 Aligned_cols=65 Identities=12% Similarity=-0.005 Sum_probs=43.2
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC--C---cccCH---HhhhcCCcEEEEcc
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEG--I---PVLTR---EDVVSEAGLFVTTT 127 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G--~---~~~~~---~~~~~~aDvvi~a~ 127 (243)
.+.+|+|+|+ |-||..++..|...|.+|+++|+............ + +..+. .+.+++.|.|+.++
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a 87 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA 87 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeecc
Confidence 5678999995 58999999999999999999987543210111111 1 11222 23456899998765
|
| >d2b0ja2 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 5,10-methenyltetrahydromethanopterin hydrogenase, HMD species: Archaeon Methanocaldococcus jannaschii [TaxId: 2190]
Probab=89.63 E-value=0.014 Score=47.59 Aligned_cols=87 Identities=17% Similarity=0.207 Sum_probs=55.9
Q ss_pred EEEEcCC--hHHHHHHH------HHHhCCCEEEEEeCCchhHHHHhhcC-------------------------------
Q 037949 67 AVDCGHG--DVGRGCAA------ALKAVGARVMGTEIDLICALQALTEG------------------------------- 107 (243)
Q Consensus 67 vlViG~G--~IG~~~A~------~l~~~Ga~V~v~d~~~~r~~~a~~~G------------------------------- 107 (243)
+.|+|+| ..|.++++ .+...|..|++.|.|+++...+...|
T Consensus 43 ~~~~gagl~~~~~gi~~v~vs~~~fa~~g~~v~~~d~d~~~v~~~~~~g~~~i~~p~l~~~v~~~~~~~~~~~~~~~~~~ 122 (242)
T d2b0ja2 43 SITYGAELLHLVPDVKEVIVSDPCFAEEPGLVVIDEFDPKEVMEAHLSGNPESIMPKIREVVKAKAKELPKPPKACIHLV 122 (242)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECGGGGSSSEEEECCCSCHHHHHHHHHTTCGGGTHHHHHHHHHHHHHTSCCTTTEEEESS
T ss_pred eeeeeecHHhhhhchhhhhccchhhhhcCCeEEEEeCCHHHHHHHHhcCCchhhcchHHHHHHHHHHhccCCccchhhcC
Confidence 4455555 34545555 46788889999999976532222222
Q ss_pred ------Cc-ccCHHhhhcCCcEEEEccCCh----hcccHHHHccCCCCeEEEEecCCC
Q 037949 108 ------IP-VLTREDVVSEAGLFVTTTENA----DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 108 ------~~-~~~~~~~~~~aDvvi~a~G~~----~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.. +.+..++++++|+||.|...+ .+++ +..+.++++.++++++...
T Consensus 123 ~pEe~Gv~v~~d~~Eav~~ADiII~~vP~~~~v~~Vi~-~I~~~l~~g~Iiid~STi~ 179 (242)
T d2b0ja2 123 HPEDVGLKVTSDDREAVEGADIVITWLPKGNKQPDIIK-KFADAIPEGAIVTHACTIP 179 (242)
T ss_dssp CGGGGTCEEESCHHHHHTTCSEEEECCTTCTTHHHHHH-HHGGGSCTTCEEEECSSSC
T ss_pred CHHHCCCEEECCHHHHHhcCCeEEEeeecHHHHHHHHH-HHHhhCCCCcEEEecCCCc
Confidence 11 122345678999999998543 3443 5678899999999877653
|
| >d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Mitochondrial NAD(P)-dependent malic enzyme species: Domestic pigeon (Columba livia) [TaxId: 8932]
Probab=89.56 E-value=0.71 Score=38.05 Aligned_cols=113 Identities=15% Similarity=0.174 Sum_probs=68.5
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhC----C------C-EEEEEeCCchhH-----------HHHhhcCC
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAV----G------A-RVMGTEIDLICA-----------LQALTEGI 108 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~----G------a-~V~v~d~~~~r~-----------~~a~~~G~ 108 (243)
+.+++. .+..+...+++|.|+|.-|.+++..+... | . +++++|....-. ..+. ...
T Consensus 13 inAlki-~gk~l~d~kiV~~GAGsAg~gia~~l~~~~~~~G~~~~~a~~~i~l~D~kGlv~~~R~~l~~~k~~~a~-~~~ 90 (298)
T d1gq2a1 13 LAALRI-TKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAH-EHC 90 (298)
T ss_dssp HHHHHH-HTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCB-SCC
T ss_pred HHHHHH-hCCCHHHcEEEEECccHHHHHHHHHHHHHHHHcCCChhhccceEEEEeCCCcccCCCcccCHHHHHHHH-Hhh
Confidence 344433 34468899999999998888877777643 3 2 689998754311 0000 001
Q ss_pred cccCHHhhhc--CCcEEEEccCChhcccHHHHc---cCCCCeEEEEecCCC--CCCChhHHHHh
Q 037949 109 PVLTREDVVS--EAGLFVTTTENADIIMVRHMK---QMKNAAIVCNIGHFD--NEIDMLDLEAY 165 (243)
Q Consensus 109 ~~~~~~~~~~--~aDvvi~a~G~~~~i~~~~l~---~l~~g~~vvnvg~~~--~~id~~~l~~~ 165 (243)
+..++.++++ ..++++-+++.+++++.+.++ .+.+.-+|.-.+-.. .+.+..+...|
T Consensus 91 ~~~~l~~~i~~vkptvliG~s~~~g~ft~evv~~ma~~~~~PIIFaLSNPt~~~E~~~~~a~~w 154 (298)
T d1gq2a1 91 EMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKY 154 (298)
T ss_dssp CCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHHH
T ss_pred hhhhhHHHhhccChheeEecccccCcCCHHHHHHHHhhCCCCEEEEccCCCCcCCCCHHHHhhh
Confidence 1123445443 478888898888888887665 445777777666553 34444444443
|
| >d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Thermotoga maritima [TaxId: 2336]
Probab=89.45 E-value=0.62 Score=34.37 Aligned_cols=101 Identities=12% Similarity=0.012 Sum_probs=62.9
Q ss_pred ccCcEEEEEcC--ChHHHHHHHHHHhCCCEEEEEeCCchh-----HH----HHhhcCCc---ccCHHhhhcCCcEEEEcc
Q 037949 62 IAGKIAVDCGH--GDVGRGCAAALKAVGARVMGTEIDLIC-----AL----QALTEGIP---VLTREDVVSEAGLFVTTT 127 (243)
Q Consensus 62 l~g~~vlViG~--G~IG~~~A~~l~~~Ga~V~v~d~~~~r-----~~----~a~~~G~~---~~~~~~~~~~aDvvi~a~ 127 (243)
+.|++++++|= ..+=...+..+..+|+++.++-+.... .. .+...+.. ..+++++++++|+|+...
T Consensus 1 l~g~ki~~vGD~~nnV~~Sli~~~~~~g~~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~ai~~aDviyt~~ 80 (161)
T d1vlva2 1 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV 80 (161)
T ss_dssp STTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEecchhhhhhhhHHHHHHHHHhhcCCceEEEecHHHhhhhhhheeccc
Confidence 46899999994 478999999999999999988543321 11 12233332 246788999999998653
Q ss_pred C-------C---------hh-cccHHHHccCCCCeEEEEecCC--CCCCChhHH
Q 037949 128 E-------N---------AD-IIMVRHMKQMKNAAIVCNIGHF--DNEIDMLDL 162 (243)
Q Consensus 128 G-------~---------~~-~i~~~~l~~l~~g~~vvnvg~~--~~~id~~~l 162 (243)
- . +. ..+.......++++++.-.+.. +.|++.+.+
T Consensus 81 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~MH~lP~~r~~Eis~~v~ 134 (161)
T d1vlva2 81 WASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYEVI 134 (161)
T ss_dssp CC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHHHH
T ss_pred eeeecccccchhhhccccceeeeehhhhcccCCCeeEecCCCcccccccchhhh
Confidence 1 0 01 1222223345778888776653 245655443
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=89.44 E-value=0.48 Score=37.25 Aligned_cols=66 Identities=12% Similarity=0.090 Sum_probs=44.3
Q ss_pred cEEEEEcCCh----HHHHHHHHHHhC--CCEEE-EEeCCchhHHHHh-hcCCc----ccCHHhhhc--CCcEEEEccCCh
Q 037949 65 KIAVDCGHGD----VGRGCAAALKAV--GARVM-GTEIDLICALQAL-TEGIP----VLTREDVVS--EAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~----IG~~~A~~l~~~--Ga~V~-v~d~~~~r~~~a~-~~G~~----~~~~~~~~~--~aDvvi~a~G~~ 130 (243)
-+|+|+|+|. ++...+..++.. +++|+ ++|+++.++.... ..+.. ..+.++++. +.|+|+.|+.+.
T Consensus 17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~iD~V~i~tp~~ 96 (237)
T d2nvwa1 17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKVP 96 (237)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCHH
T ss_pred eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecchhhcccccccceeeccCCCc
Confidence 5899999986 556556666654 56765 6899988764433 44542 246677663 688999997653
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.23 E-value=0.25 Score=40.22 Aligned_cols=32 Identities=28% Similarity=0.159 Sum_probs=29.3
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
|+++|+|+. -||..++..|...|.+|+++|+.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~ 34 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR 34 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence 789999965 89999999999999999999974
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=89.15 E-value=0.19 Score=39.75 Aligned_cols=34 Identities=21% Similarity=0.055 Sum_probs=29.7
Q ss_pred cccCcEEEEEcCCh-----------------HHHHHHHHHHhCCCEEEEEe
Q 037949 61 TIAGKIAVDCGHGD-----------------VGRGCAAALKAVGARVMGTE 94 (243)
Q Consensus 61 ~l~g~~vlViG~G~-----------------IG~~~A~~l~~~Ga~V~v~d 94 (243)
.++|++|+|+++|. .|.++|+.|..+|++|+++.
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~ 53 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVS 53 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhh
Confidence 47899999998764 89999999999999998863
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=88.64 E-value=0.61 Score=35.16 Aligned_cols=88 Identities=19% Similarity=0.205 Sum_probs=53.5
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh----hcCCcc-----cCHHhh--hcCCcEEEEcc---
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL----TEGIPV-----LTREDV--VSEAGLFVTTT--- 127 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~----~~G~~~-----~~~~~~--~~~aDvvi~a~--- 127 (243)
+++.+|+=+|+| .|..+. .+...|++|+.+|+++..++.+. ..|.+. .+..+. -...|+|+...
T Consensus 29 ~~~grvLDiGcG-~G~~~~-~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~fD~I~~~~~~~ 106 (198)
T d2i6ga1 29 VAPGRTLDLGCG-NGRNSL-YLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTFDGEYDFILSTVVMM 106 (198)
T ss_dssp SCSCEEEEETCT-TSHHHH-HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCCCCCEEEEEEESCGG
T ss_pred CCCCcEEEECCC-CCHHHH-HHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccccccccEEEEeeeee
Confidence 345689999999 666544 44568999999999998665443 234321 122221 13468887431
Q ss_pred --CC---hhcccHHHHccCCCCeEEEEecC
Q 037949 128 --EN---ADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 128 --G~---~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.. ..++. +..+.++++|+++....
T Consensus 107 ~~~~~~~~~~l~-~~~~~L~pgG~~~~~~~ 135 (198)
T d2i6ga1 107 FLEAQTIPGLIA-NMQRCTKPGGYNLIVAA 135 (198)
T ss_dssp GSCTTHHHHHHH-HHHHTEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHH-HHHHHcCCCcEEEEEEe
Confidence 11 12332 45667899998886543
|
| >d1qp8a2 c.23.12.1 (A:1-82,A:264-302) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: Formate/glycerate dehydrogenases, substrate-binding domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=88.36 E-value=0.0016 Score=47.61 Aligned_cols=23 Identities=17% Similarity=0.222 Sum_probs=20.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG 87 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G 87 (243)
++++|+|+|.||+.+|++++++|
T Consensus 99 r~l~i~G~G~iG~~iA~r~~a~G 121 (121)
T d1qp8a2 99 RNLITYATGGRPRNIAKREDYIG 121 (121)
T ss_dssp HHHHHHHTTSCCSCBCCGGGTC-
T ss_pred CCEEEEcCCHHHHHHHHHHHhcC
Confidence 67899999999999999999987
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.15 E-value=0.15 Score=45.64 Aligned_cols=36 Identities=8% Similarity=-0.048 Sum_probs=32.2
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~ 97 (243)
+...+|+|+|+|++|..+++.|...|. +++++|.+.
T Consensus 23 L~~s~VlvvG~gglG~Ei~knLvl~GVg~itivD~d~ 59 (529)
T d1yova1 23 LESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQ 59 (529)
T ss_dssp HHHCEEEECCCSHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred HhCCCEEEECCCHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 567899999999999999999999998 899987653
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=87.42 E-value=0.31 Score=37.21 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=29.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGT 93 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~ 93 (243)
.+.||+|+|+|+|.-|.-+|..+...+++++..
T Consensus 29 ~~~gK~V~VvG~G~Sa~dia~~~~~~~~~~~~~ 61 (235)
T d1w4xa2 29 DFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVF 61 (235)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhhhcccccc
Confidence 579999999999999999999999999976665
|
| >d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.42 E-value=1.9 Score=31.81 Aligned_cols=92 Identities=10% Similarity=0.006 Sum_probs=62.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh-----HH----HHhhcCCc---ccCHHhhhcCCcEEEEccC
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC-----AL----QALTEGIP---VLTREDVVSEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r-----~~----~a~~~G~~---~~~~~~~~~~aDvvi~a~G 128 (243)
+.|++++++|-+ ++-...+..+..+|+++.++-+.... .. .+...|.. ..++.++++++|+++...-
T Consensus 2 l~gl~I~~vGD~~nV~~Sli~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~i~~~~d~~~~~~~advi~~~~~ 81 (170)
T d1otha2 2 LKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTW 81 (170)
T ss_dssp CTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCS
T ss_pred CCCCEEEEEcCchhHHHHHHHHHHHcCCEEEEEeccccCCchHHHHHHHHHHhccCCEEEEEcCHHHHHhhhhheeeece
Confidence 679999999988 67777888888899999887543221 11 12233433 3467888999999986531
Q ss_pred C----------------hhcccHHHHccCCCCeEEEEecCC
Q 037949 129 N----------------ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 129 ~----------------~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
. .-.++.+.+..++++++|.-.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~MHplP~ 122 (170)
T d1otha2 82 ISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLPR 122 (170)
T ss_dssp SCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSCC
T ss_pred ecccchhhhHHHHHHHhhhhhhhhhhhccCCceEEecCCCc
Confidence 1 122555567778888888776653
|
| >d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=87.24 E-value=0.45 Score=33.91 Aligned_cols=36 Identities=25% Similarity=0.255 Sum_probs=31.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
..+||+|+|+|.|.-...-|..|.....+|+++-+.
T Consensus 27 ~~~gk~V~VvGgG~sA~~~A~~L~~~a~~V~li~r~ 62 (126)
T d1fl2a2 27 LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFA 62 (126)
T ss_dssp GGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSS
T ss_pred hcCCceEEEEeCCHHHHHHHHhhhccCCceEEEecc
Confidence 478999999999999999999999997799888543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.22 E-value=0.34 Score=39.55 Aligned_cols=33 Identities=21% Similarity=0.065 Sum_probs=29.0
Q ss_pred cEE-EEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 65 KIA-VDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 65 ~~v-lViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
|+| +|+|+. -||..++..|...|.+|+++|+.+
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~ 35 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS 35 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 467 899976 699999999999999999999854
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=87.08 E-value=0.18 Score=36.21 Aligned_cols=63 Identities=14% Similarity=0.023 Sum_probs=39.6
Q ss_pred cEEEEEcCChHHHHHHHHHH-hCCCEEEE-EeCCchhHHHHhhcCCcccCHHh---hh-cCCcEEEEccC
Q 037949 65 KIAVDCGHGDVGRGCAAALK-AVGARVMG-TEIDLICALQALTEGIPVLTRED---VV-SEAGLFVTTTE 128 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~-~~Ga~V~v-~d~~~~r~~~a~~~G~~~~~~~~---~~-~~aDvvi~a~G 128 (243)
.+|+|+|+|..|..++..+. ..|.+++. +|-|+.+. -..-.|..+...++ .. +..++++.+..
T Consensus 4 ~~v~I~GaG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~-G~~I~Gi~V~~~~~l~~~~~~~i~iai~~i~ 72 (126)
T d2dt5a2 4 WGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKV-GRPVRGGVIEHVDLLPQRVPGRIEIALLTVP 72 (126)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTT-TCEETTEEEEEGGGHHHHSTTTCCEEEECSC
T ss_pred ceEEEEcCCHHHHHHHHhHhhcCCcEEEEEEeCchHhc-CCEECCEEEecHHHHHHHHhhcccEEEEeCC
Confidence 37999999999999998765 34567555 68888653 11123555543332 22 34667666654
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=86.96 E-value=0.84 Score=33.13 Aligned_cols=84 Identities=10% Similarity=-0.009 Sum_probs=54.8
Q ss_pred cCcEEEEEcCC----hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-CHHhhhcCCcEEEEccCCh---hccc
Q 037949 63 AGKIAVDCGHG----DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-TREDVVSEAGLFVTTTENA---DIIM 134 (243)
Q Consensus 63 ~g~~vlViG~G----~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G~~---~~i~ 134 (243)
+-|+++|+|+. ..|..++..++..|.+|+-+.+... .-.|..+. ++.+.-...|+++-++... .++.
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~-----~i~G~~~~~sl~dlp~~iD~v~i~vp~~~~~~~~~ 92 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE-----EVLGRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVE 92 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS-----EETTEECBSSGGGCSSCCSEEEECSCHHHHHHHHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccc-----ccCCCcccccccccCccceEEEEEeCHHHHHHHHH
Confidence 56899999987 4999999999999999888854322 12465543 4566556789998887543 2332
Q ss_pred HHHHccCCCCeEEEEecCC
Q 037949 135 VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~ 153 (243)
+..+ ....++....|..
T Consensus 93 -e~~~-~g~k~v~~~~G~~ 109 (139)
T d2d59a1 93 -QAIK-KGAKVVWFQYNTY 109 (139)
T ss_dssp -HHHH-HTCSEEEECTTCC
T ss_pred -HHHH-hCCCEEEEecccc
Confidence 2232 3444555444443
|
| >d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Escherichia coli [TaxId: 562]
Probab=86.78 E-value=3.8 Score=29.75 Aligned_cols=99 Identities=16% Similarity=0.079 Sum_probs=63.4
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCC-EEEEEeCCc-----hhHHHHhhcCCc---ccCHHhhhcCCcEEEEccCC
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGA-RVMGTEIDL-----ICALQALTEGIP---VLTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga-~V~v~d~~~-----~r~~~a~~~G~~---~~~~~~~~~~aDvvi~a~G~ 129 (243)
+.|.+++++|= +.+....+..+..+|. .++++-+.. .....+...|.. ..+++++++++|+++.....
T Consensus 2 l~gl~i~~vGD~~nsrv~~Sli~~l~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~~~ 81 (160)
T d1ekxa2 2 LDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQ 81 (160)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHTTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCSTTTGGGCSEEEECCCC
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHHHHcCCCeEEeeccchhhhhHHHHHHHhhhccccccccCHHHHhCcCceEEeeccc
Confidence 46899999996 4589999999999975 566664322 222333344543 24577889999999876321
Q ss_pred --------------hhcccHHHHccCCCCeEEEEecCCCCCCChh
Q 037949 130 --------------ADIIMVRHMKQMKNAAIVCNIGHFDNEIDML 160 (243)
Q Consensus 130 --------------~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~ 160 (243)
...++.+.+..++++++|.-...-+.|++.+
T Consensus 82 ~e~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~mHcLPRg~EI~~~ 126 (160)
T d1ekxa2 82 KERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATD 126 (160)
T ss_dssp GGGCCGGGGGGCSCSCCBCGGGGTTCCTTCEEECCSCCSSSBCGG
T ss_pred ccccchHHHHHHHHHhhccHHHHHhcCcceeeecCCCcCCccchh
Confidence 1123445567778888887655433455544
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.64 E-value=0.28 Score=38.40 Aligned_cols=43 Identities=12% Similarity=-0.047 Sum_probs=31.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT 105 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~ 105 (243)
.+|++|+-||+|. |..+...++..+.+|+++|+|+..++.|.+
T Consensus 52 ~~g~~VLdIGcG~-G~~a~~~a~~~~~~v~~id~s~~~~~~a~~ 94 (229)
T d1zx0a1 52 SKGGRVLEVGFGM-AIAASKVQEAPIDEHWIIECNDGVFQRLRD 94 (229)
T ss_dssp TTCEEEEEECCTT-SHHHHHHHTSCEEEEEEEECCHHHHHHHHH
T ss_pred cCCCeEEEeeccc-hHHHHHHHHcCCCeEEEeCCCHHHHHHHHH
Confidence 4789999999994 444444555555789999999987766654
|
| >d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Escherichia coli [TaxId: 562]
Probab=86.36 E-value=0.27 Score=40.22 Aligned_cols=33 Identities=18% Similarity=0.081 Sum_probs=28.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhC--CCEEEEEeCCc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAV--GARVMGTEIDL 97 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~--Ga~V~v~d~~~ 97 (243)
-.|+|||.|.-|+.+|..++.. |++|++++..+
T Consensus 6 ~DVlVIG~G~AGl~AA~~a~~~~~g~~V~lleK~~ 40 (311)
T d1kf6a2 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (311)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred cCEEEECccHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 4589999999999999888765 77999998654
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=86.28 E-value=1.3 Score=30.92 Aligned_cols=61 Identities=13% Similarity=0.138 Sum_probs=44.5
Q ss_pred cEEEEEcCC----hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-CHHhhhcCCcEEEEccCCh
Q 037949 65 KIAVDCGHG----DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-TREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G----~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G~~ 130 (243)
|+++|+|+. ..|..+.+.|+..|.+|+-+.++... -.|..+. ++.+.-...|+++-++...
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~-----i~G~~~y~sl~~lp~~~D~vvi~vp~~ 67 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE-----IEGLKCYRSVRELPKDVDVIVFVVPPK 67 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-----ETTEECBSSGGGSCTTCCEEEECSCHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc-----ccCccccccchhccccceEEEEEeCHH
Confidence 789999976 58999999999999998887544322 2455433 4555555679998887653
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.88 E-value=0.47 Score=38.73 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=29.5
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeC
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
.-|+++|+|+ |-||..++..|...|.+|+++|+
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~ 48 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN 48 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 3489999996 48999999999999999999985
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.25 E-value=0.94 Score=32.77 Aligned_cols=49 Identities=14% Similarity=0.033 Sum_probs=32.4
Q ss_pred EEEEEc-CChHHHHHHHHHHh-CCCEEEE-EeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEcc
Q 037949 66 IAVDCG-HGDVGRGCAAALKA-VGARVMG-TEIDLICALQALTEGIPVLTREDVVSEAGLFVTTT 127 (243)
Q Consensus 66 ~vlViG-~G~IG~~~A~~l~~-~Ga~V~v-~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~ 127 (243)
+|+|+| .|.+|+.+++.+.. .+++++. +|...... ......+|++|+.+
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~-------------~~~~~~~DvvIDFS 52 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLS-------------LLTDGNTEVVIDFT 52 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTH-------------HHHTTTCSEEEECC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchh-------------hhccccCCEEEEcc
Confidence 689999 59999998887654 5667544 55432210 01124689999997
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.24 E-value=0.94 Score=37.63 Aligned_cols=87 Identities=16% Similarity=0.151 Sum_probs=54.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCC--CEEEEEeCCchhHHHHhhc----C--------------Ccc--cCHHhh---
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVG--ARVMGTEIDLICALQALTE----G--------------IPV--LTREDV--- 116 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~G--a~V~v~d~~~~r~~~a~~~----G--------------~~~--~~~~~~--- 116 (243)
.+|++|+=+|+|. |..+...++..| .+|+.+|.++..+..|.+. + ++. -+..+.
T Consensus 97 ~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di~~~~~~ 175 (324)
T d2b25a1 97 NPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 175 (324)
T ss_dssp CTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecchhhcccc
Confidence 5899999999996 555555555544 4899999999887666531 0 000 011111
Q ss_pred h--cCCcEEEEccCChh-cccHHHHccCCCCeEEEEe
Q 037949 117 V--SEAGLFVTTTENAD-IIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 117 ~--~~aDvvi~a~G~~~-~i~~~~l~~l~~g~~vvnv 150 (243)
+ ..+|.||.-...+. .+. .....|||||+++..
T Consensus 176 ~~~~~fD~V~LD~p~P~~~l~-~~~~~LKpGG~lv~~ 211 (324)
T d2b25a1 176 IKSLTFDAVALDMLNPHVTLP-VFYPHLKHGGVCAVY 211 (324)
T ss_dssp -----EEEEEECSSSTTTTHH-HHGGGEEEEEEEEEE
T ss_pred cCCCCcceEeecCcCHHHHHH-HHHHhccCCCEEEEE
Confidence 1 23577765444543 454 578888999998863
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=84.62 E-value=0.83 Score=37.05 Aligned_cols=63 Identities=14% Similarity=0.081 Sum_probs=41.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-cCCc-----ccC---HH-hhhcCCcEEEEccC
Q 037949 66 IAVDCGH-GDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-EGIP-----VLT---RE-DVVSEAGLFVTTTE 128 (243)
Q Consensus 66 ~vlViG~-G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~G~~-----~~~---~~-~~~~~aDvvi~a~G 128 (243)
+|+|+|+ |-||..+++.|...|. +|++.|....+...... ..++ +.+ .. ...+++|+|+-+++
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~ 76 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA 76 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence 5899996 4799999999999994 89999886543322211 1222 111 12 24568999998764
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.39 E-value=0.61 Score=38.19 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=28.1
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
|.|+|+|+. -||..++..|...|.+|+++|.
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~ 33 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence 689999975 7999999999999999999875
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.31 E-value=0.9 Score=36.95 Aligned_cols=95 Identities=18% Similarity=0.258 Sum_probs=52.0
Q ss_pred hhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHH---HHhhcCCc----cc--CHHhh---hc
Q 037949 52 DGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICAL---QALTEGIP----VL--TREDV---VS 118 (243)
Q Consensus 52 ~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~---~a~~~G~~----~~--~~~~~---~~ 118 (243)
.|+.+... .++|++|+-+|+| .|.... .+...|+ +|+.+|.++.... .....+.. +. +..+. ..
T Consensus 25 ~ai~~~~~-~~~~~~VLDiGcG-~G~lsl-~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~~~~ 101 (311)
T d2fyta1 25 DFIYQNPH-IFKDKVVLDVGCG-TGILSM-FAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVE 101 (311)
T ss_dssp HHHHHCGG-GTTTCEEEEETCT-TSHHHH-HHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCS
T ss_pred HHHHhccc-cCCcCEEEEECCC-CCHHHH-HHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcCccc
Confidence 45544322 4689999999999 444333 3334687 8999999986431 11223331 11 12222 24
Q ss_pred CCcEEEEc-cCC-------hhcccHHHHccCCCCeEEEE
Q 037949 119 EAGLFVTT-TEN-------ADIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 119 ~aDvvi~a-~G~-------~~~i~~~~l~~l~~g~~vvn 149 (243)
.+|+|+.- .+. ...+....-..++|||+++.
T Consensus 102 ~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~iip 140 (311)
T d2fyta1 102 KVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 140 (311)
T ss_dssp CEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred cceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEec
Confidence 68988752 221 11221112345799999873
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.26 E-value=0.54 Score=38.41 Aligned_cols=31 Identities=13% Similarity=0.078 Sum_probs=28.1
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
|+|+|+|+. -||..+++.|...|.+|+++|.
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~ 34 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence 789999965 7999999999999999999873
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=84.06 E-value=0.76 Score=37.13 Aligned_cols=88 Identities=17% Similarity=0.162 Sum_probs=56.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCC--CEEEEEeCCchhHHHHhhc-----CC--c---c--cCHHhh-h--cCCcEEE
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVG--ARVMGTEIDLICALQALTE-----GI--P---V--LTREDV-V--SEAGLFV 124 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~G--a~V~v~d~~~~r~~~a~~~-----G~--~---~--~~~~~~-~--~~aDvvi 124 (243)
.+|++|+=+|+|. |......++..| .+|+.+|.++..++.|++. +. + . -+..+. + ..+|.|+
T Consensus 95 ~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~~~~fDaV~ 173 (264)
T d1i9ga_ 95 FPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAV 173 (264)
T ss_dssp CTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEE
T ss_pred CCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccccccccCCCcceEE
Confidence 5899999999994 433344444433 4899999999987766531 11 1 1 122221 1 2578877
Q ss_pred EccCChhcccHHHHccCCCCeEEEEe
Q 037949 125 TTTENADIIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 125 ~a~G~~~~i~~~~l~~l~~g~~vvnv 150 (243)
.....+...-....+.||+||+++..
T Consensus 174 ldlp~P~~~l~~~~~~LkpGG~lv~~ 199 (264)
T d1i9ga_ 174 LDMLAPWEVLDAVSRLLVAGGVLMVY 199 (264)
T ss_dssp EESSCGGGGHHHHHHHEEEEEEEEEE
T ss_pred EecCCHHHHHHHHHhccCCCCEEEEE
Confidence 66666644334578888999999864
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=84.05 E-value=0.18 Score=37.90 Aligned_cols=64 Identities=20% Similarity=0.228 Sum_probs=39.3
Q ss_pred cEEEEEcC-ChHHHHHHHHHHhC-CCEEEE-EeCCchhHHHHhh---------cCCcc-cCHHhhhcCCcEEEEccCC
Q 037949 65 KIAVDCGH-GDVGRGCAAALKAV-GARVMG-TEIDLICALQALT---------EGIPV-LTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 65 ~~vlViG~-G~IG~~~A~~l~~~-Ga~V~v-~d~~~~r~~~a~~---------~G~~~-~~~~~~~~~aDvvi~a~G~ 129 (243)
-+|+|.|+ |.+|+.+++.+... +++++. +|+..... .... .+..+ .++++....+||+++.+-.
T Consensus 5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~-~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~p 81 (162)
T d1diha1 5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL-LGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRP 81 (162)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTT-CSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchh-ccchhhhhhccccCCceeeccHHHHhcccceEEEeccH
Confidence 36999996 99999999988765 667543 55533211 0000 11111 2344556789999999633
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=83.98 E-value=0.63 Score=38.00 Aligned_cols=30 Identities=17% Similarity=0.134 Sum_probs=27.4
Q ss_pred EEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC
Q 037949 66 IAVDCGHG-DVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 66 ~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
+|+|+|+. -||..++..|...|.+|+++|+
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~ 32 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 59999976 7999999999999999999975
|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=83.90 E-value=0.5 Score=39.34 Aligned_cols=31 Identities=26% Similarity=0.199 Sum_probs=28.2
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.++|||+|.-|..+|.+|...|.+|++.|.=
T Consensus 4 D~IIVGsG~aG~v~A~rLae~g~~VlvLEaG 34 (360)
T d1kdga1 4 DYIIVGAGPGGIIAADRLSEAGKKVLLLERG 34 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHhhCCCeEEEEEcc
Confidence 4799999999999999999999999999753
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=83.47 E-value=0.84 Score=35.28 Aligned_cols=85 Identities=12% Similarity=0.105 Sum_probs=53.5
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCCc--c--cCHHhh-h-cCCcEEEEccCCh-
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----EGIP--V--LTREDV-V-SEAGLFVTTTENA- 130 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~~--~--~~~~~~-~-~~aDvvi~a~G~~- 130 (243)
.+.++|+=+|||+ |..+.. +...|++|+.+|+++.-+..|.+ .+.. . -+..+. . ...|+|+..-++-
T Consensus 40 ~~~~~iLDiGcGt-G~~~~~-l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~~~~fD~I~~~~~~~~ 117 (251)
T d1wzna1 40 REVRRVLDLACGT-GIPTLE-LAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIM 117 (251)
T ss_dssp SCCCEEEEETCTT-CHHHHH-HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGGG
T ss_pred CCCCEEEEeCCCC-Cccchh-hcccceEEEEEeeccccccccccccccccccchheehhhhhcccccccchHhhhhhhhh
Confidence 4678999999997 666554 44579999999999976655553 2322 1 122221 1 3578877542221
Q ss_pred --------hcccHHHHccCCCCeEEEE
Q 037949 131 --------DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 131 --------~~i~~~~l~~l~~g~~vvn 149 (243)
..+. +.-+.|+|||+++.
T Consensus 118 ~~~~~~~~~~L~-~~~~~LkpgG~lii 143 (251)
T d1wzna1 118 YFDEEDLRKLFS-KVAEALKPGGVFIT 143 (251)
T ss_dssp GSCHHHHHHHHH-HHHHHEEEEEEEEE
T ss_pred cCChHHHHHHHH-HHHHHcCCCcEEEE
Confidence 1232 35677899998875
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=83.41 E-value=0.34 Score=38.45 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=28.5
Q ss_pred cEEEEEcCChHHHH-----HHHHHHhCCCEEEEEeCCch
Q 037949 65 KIAVDCGHGDVGRG-----CAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 65 ~~vlViG~G~IG~~-----~A~~l~~~Ga~V~v~d~~~~ 98 (243)
|+++|.|-|++|+. +|..|...|.+|.++|.|+.
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D~q 40 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 67889999988874 46688889999999999874
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=83.32 E-value=1.8 Score=32.23 Aligned_cols=88 Identities=14% Similarity=0.131 Sum_probs=53.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCC----cc--cCHHhh---hcCCcEEEEccC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----EGI----PV--LTREDV---VSEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~----~~--~~~~~~---~~~aDvvi~a~G 128 (243)
.+|++|+=+|+|.=...++ .+ ..+.+|+.+|.++..+..|++ .|. ++ -+..+. ...+|.++..-+
T Consensus 32 ~~g~~VLDiGcGsG~~s~~-lA-~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D~v~~~~~ 109 (186)
T d1l3ia_ 32 GKNDVAVDVGCGTGGVTLE-LA-GRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGS 109 (186)
T ss_dssp CTTCEEEEESCTTSHHHHH-HH-TTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCC
T ss_pred CCCCEEEEEECCeEccccc-cc-ccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcCEEEEeCc
Confidence 5899999999994222222 22 346799999999987655553 343 11 123332 246888875422
Q ss_pred C---hhcccHHHHccCCCCeEEEEecC
Q 037949 129 N---ADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 129 ~---~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
. ..++. ...+.++++|+++....
T Consensus 110 ~~~~~~~~~-~~~~~LkpgG~lvi~~~ 135 (186)
T d1l3ia_ 110 GGELQEILR-IIKDKLKPGGRIIVTAI 135 (186)
T ss_dssp TTCHHHHHH-HHHHTEEEEEEEEEEEC
T ss_pred cccchHHHH-HHHHHhCcCCEEEEEee
Confidence 2 23343 45677899999876443
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=83.30 E-value=0.59 Score=35.99 Aligned_cols=88 Identities=8% Similarity=0.106 Sum_probs=56.0
Q ss_pred ccCcEEEEEcCC--hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc----CCc--c--c--CHHh-hhcCCcEEEEccC
Q 037949 62 IAGKIAVDCGHG--DVGRGCAAALKAVGARVMGTEIDLICALQALTE----GIP--V--L--TRED-VVSEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G--~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~----G~~--~--~--~~~~-~~~~aDvvi~a~G 128 (243)
.++.+|+=+||| .....+++.+...|++|+.+|.|+.-+..|.+. +.. + . +..+ ....+|+++....
T Consensus 38 ~~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~~~ 117 (225)
T d1im8a_ 38 TADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFT 117 (225)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEESC
T ss_pred CCCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEeee
Confidence 478899999997 455566666666789999999999877666531 211 1 1 1111 1235677655422
Q ss_pred C-------h-hcccHHHHccCCCCeEEEEe
Q 037949 129 N-------A-DIIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 129 ~-------~-~~i~~~~l~~l~~g~~vvnv 150 (243)
- + .++ .+..+.|+|||.++..
T Consensus 118 l~~~~~~d~~~~l-~~i~~~LkpgG~li~~ 146 (225)
T d1im8a_ 118 LQFLPPEDRIALL-TKIYEGLNPNGVLVLS 146 (225)
T ss_dssp GGGSCGGGHHHHH-HHHHHHEEEEEEEEEE
T ss_pred ccccChhhHHHHH-HHHHHhCCCCceeecc
Confidence 1 1 223 3567889999999875
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=83.27 E-value=1.5 Score=31.26 Aligned_cols=65 Identities=17% Similarity=0.148 Sum_probs=46.4
Q ss_pred cccCcEEEEEcC----ChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCCh
Q 037949 61 TIAGKIAVDCGH----GDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 61 ~l~g~~vlViG~----G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~ 130 (243)
.+.-++|+|+|+ +..|..+.+.|+..| .+|+.+.+.... -.|..+ -++.+.-...|+++.++...
T Consensus 5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~-----i~G~~~y~sl~dlp~~vDlvvi~vp~~ 75 (129)
T d2csua1 5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEE-----VQGVKAYKSVKDIPDEIDLAIIVVPKR 75 (129)
T ss_dssp TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSE-----ETTEECBSSTTSCSSCCSEEEECSCHH
T ss_pred hCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccc-----cCCeEeecchhhcCCCCceEEEecChH
Confidence 356799999998 469999999999877 489888554322 245543 34555556789999887653
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=83.20 E-value=0.69 Score=36.27 Aligned_cols=56 Identities=16% Similarity=0.200 Sum_probs=37.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCH---Hhhhc--CCcEEEEccC
Q 037949 66 IAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTR---EDVVS--EAGLFVTTTE 128 (243)
Q Consensus 66 ~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~---~~~~~--~aDvvi~a~G 128 (243)
+|+|+|+ |-||..++..|...|. ++++++..... -.+..+. ++.++ ..|+|+.++|
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~~------~~Dl~~~~~~~~~i~~~~~D~Vih~Aa 63 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKEF------CGDFSNPKGVAETVRKLRPDVIVNAAA 63 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSSS------CCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCccc------cCcCCCHHHHHHHHHHcCCCEEEEecc
Confidence 5999996 7999999999998885 55555543321 1122232 33343 5799999865
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=83.16 E-value=1.1 Score=32.18 Aligned_cols=86 Identities=12% Similarity=0.045 Sum_probs=56.1
Q ss_pred cCcEEEEEcCC----hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCCh---hccc
Q 037949 63 AGKIAVDCGHG----DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENA---DIIM 134 (243)
Q Consensus 63 ~g~~vlViG~G----~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~---~~i~ 134 (243)
.-|+++|+|+. ..|..+++.|+..|.++..+.+++.. ..-.|..+ .++.+.-...|+++.++... +++.
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~---~~i~g~~~~~~l~~i~~~iD~v~v~~p~~~v~~~v~ 88 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG---EELFGEEAVASLLDLKEPVDILDVFRPPSALMDHLP 88 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT---SEETTEECBSSGGGCCSCCSEEEECSCHHHHTTTHH
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc---ceeeceecccchhhccCCCceEEEeccHHHHHHHHH
Confidence 56899999987 49999999999999999988665431 11234443 24555545689998887543 3343
Q ss_pred HHHHccCCCCeEEEEecCC
Q 037949 135 VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~ 153 (243)
+..+ +....+++..|..
T Consensus 89 -~~~~-~g~k~i~~q~G~~ 105 (136)
T d1iuka_ 89 -EVLA-LRPGLVWLQSGIR 105 (136)
T ss_dssp -HHHH-HCCSCEEECTTCC
T ss_pred -HHHh-hCCCeEEEecCcc
Confidence 3333 3445566555543
|
| >d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Bacillus subtilis [TaxId: 1423]
Probab=83.03 E-value=0.72 Score=33.94 Aligned_cols=61 Identities=18% Similarity=0.187 Sum_probs=45.4
Q ss_pred cCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEc
Q 037949 63 AGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTT 126 (243)
Q Consensus 63 ~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a 126 (243)
.|.+++++|= +.+....+..+..+|+++.++.+...... ...+. ..+++++++++|+++..
T Consensus 2 ~gl~i~~vGD~~~srv~~Sl~~~~~~~g~~~~i~~P~~~~~~---~~~~~~~~~~~ea~~~aDviy~~ 66 (151)
T d2at2a2 2 KGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDE---ENTFGTYVSMDEAVESSDVVMLL 66 (151)
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHcCCcccccCCchhhcc---ccceeEEEechhccccCceeeee
Confidence 5889999996 57999999999999999988865543221 12233 34577888999998754
|
| >d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=82.55 E-value=0.98 Score=32.30 Aligned_cols=37 Identities=22% Similarity=0.100 Sum_probs=32.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
...||+|+|+|.|.-...-|..|...-.+|+++-+.+
T Consensus 31 ~frgk~V~VvGgGdsA~e~A~~L~~~a~~V~li~r~~ 67 (130)
T d1vdca2 31 IFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 67 (130)
T ss_dssp GGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred HhCCCEEEEEcCchHHHHHHHHHhCCCCcEEEEEecc
Confidence 4689999999999999999999998888999985543
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=82.41 E-value=0.58 Score=35.25 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=26.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEE-eCCc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGT-EIDL 97 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~-d~~~ 97 (243)
+|+|=|+|.||+.+.+.+...+.+|+.+ |+.+
T Consensus 2 kigINGfGRIGR~~~R~l~~~~i~iv~INd~~~ 34 (168)
T d2g82a1 2 KVGINGFGRIGRQVFRILHSRGVEVALINDLTD 34 (168)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSC
T ss_pred EEEEECCcHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 6899999999999999999888876554 6543
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=82.23 E-value=1 Score=33.87 Aligned_cols=85 Identities=13% Similarity=0.050 Sum_probs=52.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCCcc----cCHHhh---hcCCcEEEEccCCh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----EGIPV----LTREDV---VSEAGLFVTTTENA 130 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~~~----~~~~~~---~~~aDvvi~a~G~~ 130 (243)
.++.+|+=+|||+ |..+. .+...|++|+.+|+|+..+..|++ .+... .+..+. -...|+|+....-.
T Consensus 36 ~~~~~ILDiGcG~-G~~~~-~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~~~~~fD~I~~~~~l~ 113 (226)
T d1ve3a1 36 KKRGKVLDLACGV-GGFSF-LLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIV 113 (226)
T ss_dssp CSCCEEEEETCTT-SHHHH-HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEECCCc-chhhh-hHhhhhcccccccccccchhhhhhhhccccccccccccccccccccCcCceEEEEecchh
Confidence 3678999999996 44333 444579999999999887655543 23211 112221 13578887553211
Q ss_pred -----h---cccHHHHccCCCCeEEEE
Q 037949 131 -----D---IIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 131 -----~---~i~~~~l~~l~~g~~vvn 149 (243)
. ++. +..+.|+|||+++.
T Consensus 114 ~~~~~d~~~~l~-~i~~~LkpgG~lii 139 (226)
T d1ve3a1 114 HFEPLELNQVFK-EVRRVLKPSGKFIM 139 (226)
T ss_dssp GCCHHHHHHHHH-HHHHHEEEEEEEEE
T ss_pred hCChhHHHHHHH-HHHHHcCcCcEEEE
Confidence 1 232 45778899998764
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=81.88 E-value=0.59 Score=36.98 Aligned_cols=37 Identities=27% Similarity=0.259 Sum_probs=28.5
Q ss_pred cCcEEEEE-cCChHHHHH-----HHHHHhCCCEEEEEeCCchh
Q 037949 63 AGKIAVDC-GHGDVGRGC-----AAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 63 ~g~~vlVi-G~G~IG~~~-----A~~l~~~Ga~V~v~d~~~~r 99 (243)
.|.+|+|+ |=|++|+.+ |..++..|.+|.++|.|+..
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~~ 60 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAA 60 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 35555555 889988864 78888999999999999763
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=81.68 E-value=0.62 Score=37.31 Aligned_cols=32 Identities=19% Similarity=0.164 Sum_probs=27.9
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
|+|+|+|+. -||..+++.|...|..|++.+..
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~ 35 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR 35 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence 689999965 89999999999999998887653
|
| >d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=81.61 E-value=2.4 Score=31.87 Aligned_cols=65 Identities=12% Similarity=0.077 Sum_probs=47.3
Q ss_pred ccCcEEEEEcCC--hHHHHHHHHHHhCCCEEEEEeCCchh-----HHHH----hhcCCc---ccCHHhhhcCCcEEEEc
Q 037949 62 IAGKIAVDCGHG--DVGRGCAAALKAVGARVMGTEIDLIC-----ALQA----LTEGIP---VLTREDVVSEAGLFVTT 126 (243)
Q Consensus 62 l~g~~vlViG~G--~IG~~~A~~l~~~Ga~V~v~d~~~~r-----~~~a----~~~G~~---~~~~~~~~~~aDvvi~a 126 (243)
+.|.+|+.+|=| ++-...+..+..+|+++.++-+.... ...+ ...|.. ..+++++++++|+|+..
T Consensus 3 l~~lkia~vGD~~nnV~~Sli~~~~~~G~~l~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aDvVyt~ 81 (185)
T d1dxha2 3 LHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD 81 (185)
T ss_dssp GGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHHHcCCEEEEEccHHHHhhhHHHHHHHHHhhccCCeEEEEeChhhccccccEEEee
Confidence 678999999954 79999999999999999998553221 1111 123432 24678889999999865
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=80.78 E-value=1 Score=36.82 Aligned_cols=37 Identities=32% Similarity=0.544 Sum_probs=27.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r 99 (243)
..+|++|+-+|+|. |..... +...|+ +|+.+|.++..
T Consensus 31 ~~~~~~VLDiGcG~-G~ls~~-aa~~Ga~~V~avd~s~~~ 68 (316)
T d1oria_ 31 LFKDKVVLDVGSGT-GILCMF-AAKAGARKVIGIECSSIS 68 (316)
T ss_dssp HHTTCEEEEETCTT-SHHHHH-HHHTTCSEEEEEECSTTH
T ss_pred cCCcCEEEEEecCC-cHHHHH-HHHhCCCEEEEEcCcHHH
Confidence 36899999999995 654444 444787 79999998753
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=80.74 E-value=0.028 Score=44.43 Aligned_cols=37 Identities=8% Similarity=-0.085 Sum_probs=32.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
..+++|+|+|+|.+|..+|..+...|.+|+++++.+.
T Consensus 178 ~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~r~~~ 214 (233)
T d1djqa3 178 DAEAPRLIADATFTGHRVAREIEEANPQIAIPYKRET 214 (233)
T ss_dssp GGTSCCCHHHHHHHHHHHHHTTTSSCTTSCCCCCCCC
T ss_pred ccCCceeEecCchHHHHHHHHHHhcCCceEEEEeccc
Confidence 4678999999999999999999999999988876553
|
| >d1tuga1 c.78.1.1 (A:1-150,A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Escherichia coli [TaxId: 562]
Probab=80.65 E-value=8.5 Score=31.12 Aligned_cols=100 Identities=16% Similarity=0.086 Sum_probs=64.6
Q ss_pred cccCcEEEEEcC---ChHHHHHHHHHHhCC-CEEEEEeCCch-----hHHHHhhcCCc---ccCHHhhhcCCcEEEEccC
Q 037949 61 TIAGKIAVDCGH---GDVGRGCAAALKAVG-ARVMGTEIDLI-----CALQALTEGIP---VLTREDVVSEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~---G~IG~~~A~~l~~~G-a~V~v~d~~~~-----r~~~a~~~G~~---~~~~~~~~~~aDvvi~a~G 128 (243)
.+.|.+++++|- +.+-...+..+..+| .++.++-+... -...+...|.. ..++++++.++|+|+....
T Consensus 151 ~l~~~~i~~vGD~~~~~v~~S~~~~~~~~~~~~~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~~ 230 (310)
T d1tuga1 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHTTSSSCEEEEECCGGGCCCHHHHHHHHTTTCCEEEESCGGGTTTTCSEEEECCC
T ss_pred CcccceEEEEeccccCcchHHHHHHHHhccCceEEEeCCcccccchhcccccccccceeeeeechhhhccCCceeeeccc
Confidence 478999999997 567788888888886 58888754332 22333344543 2467888899999986532
Q ss_pred C--------------hhcccHHHHccCCCCeEEEEecCCCCCCChh
Q 037949 129 N--------------ADIIMVRHMKQMKNAAIVCNIGHFDNEIDML 160 (243)
Q Consensus 129 ~--------------~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~ 160 (243)
. .-.++.+.+..++++++|.-+..-+.|++.+
T Consensus 231 ~~e~~~~~~~~~~~~~~~v~~~~l~~a~~~~i~MHcLPRg~EIt~e 276 (310)
T d1tuga1 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATD 276 (310)
T ss_dssp CGGGSCHHHHHTTTTSSCBCGGGGTTSCSSCEEECCSCCSSSBCGG
T ss_pred chhhhcccchhhhhhhhhhhHHHHhcCCCCcEEeeCCCCCCEecHh
Confidence 1 1225555677778888877554433455544
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=80.06 E-value=0.99 Score=35.35 Aligned_cols=86 Identities=13% Similarity=0.044 Sum_probs=52.4
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----cCCc--c----cCHH-h---hhcCCcEEEEcc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----EGIP--V----LTRE-D---VVSEAGLFVTTT 127 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----~G~~--~----~~~~-~---~~~~aDvvi~a~ 127 (243)
.+|++|+=+|+|. |..+..+++....+|+.+|+|+..+..|.. .+.. + .+.. . .-...|+|+..-
T Consensus 23 ~~~~~VLDlGCG~-G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~~ 101 (252)
T d1ri5a_ 23 KRGDSVLDLGCGK-GGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 101 (252)
T ss_dssp CTTCEEEEETCTT-TTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCcCEEEEecccC-cHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEEEcc
Confidence 4789999999996 555556655544589999999997766653 1211 1 1111 1 112589886542
Q ss_pred CChh----------cccHHHHccCCCCeEEEE
Q 037949 128 ENAD----------IIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 128 G~~~----------~i~~~~l~~l~~g~~vvn 149 (243)
.-.+ ++. ..-+.|+|||+++.
T Consensus 102 ~l~~~~~~~~~~~~~l~-~i~~~Lk~gG~~i~ 132 (252)
T d1ri5a_ 102 SFHYAFSTSESLDIAQR-NIARHLRPGGYFIM 132 (252)
T ss_dssp CGGGGGSSHHHHHHHHH-HHHHTEEEEEEEEE
T ss_pred eeeecCCCHHHHHHHHH-HHhceeCCCCEEEE
Confidence 2111 121 23466799999885
|