Citrus Sinensis ID: 037991

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560
Protein Sequence
MMMERRNRDVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPHRDDFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLEYADPVTHLLPWQQVTNSLVVEG
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHHHHccccccccEEccccccEEcccccccccccccccccccccccccccccEEcccEEEEEEEcccccccccccccEEEEcccccccccccccccccEEccccccccEEEEEcccccccccccccccccccccccccccccccEEEEEEEEEccccEEEEEEEEcccccccccccEEEEEEcccccccEEEEEEEEccccEEEEEccccccccccccccccEEEEEEEccccccccccccccccccccccccccEEEEEEEEEcHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHcccccEEEEEEccccEEEccccccHHHHHHHHcccccEEEEEEEEEEEccccccccccccEEEEEEEEccccccccEEEccccccccEEEcEEEEEEccccEEEEEcccEEEEEEEEEccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccEEcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccHHHHHHcccccccccccEEEcEEEccccEEEEEEcccccccccccccEEEEcccccccccHcccccccccccccccccccEEccccccccEEEEEcccccccccccccccccccHEEEEEEEcccccEEEEEEccccccccccccccEEEEEccccccccEEEEcHHHHHHHHHHccccccHHccccccccEEEEEEEEccccccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEcccEEEccccccHHHHHHHccccccccEEEEEEEEEcccccEccccccEEEcEEEcccccccccEEEccHHHccccccccEEEEcccccccccccccEEEEEEEEEccHHHHHHHHHcccccEccccccccccccccccccccccccccccHHHHHHEEHccccHHHEEEcccccccccccEEcccccEEcc
Coil and Loop (DISEMBL)
mmmerrnrdvVLSHRFLKSYLCVIFSCvflggftfsTFRLLFRERFrpalgstwrapimratgdespislgvslretvmlpdQVLLFlkyprparlfteedfqcvyypanssrpfelklkqppiridgrdfdeqilrcripprgfnisldlnrhrniinipvgyvhrwdsvsyeavfdrdnTTLVFIKGlnlrrdraynpsrfecvygwdfrRIKFLLRSELLSIgqevgrcetplsvlsgphrddfIKVSIRLKGkgifrtvahpvrlsgpeppaekdheMCICTMLRNQARFIREWVMYHARIGVQrwfiydnnsndniESVIDSLSsekfnitrhvwpwiktqeagFAHCALRARDvcnwvgfidvdeffrlpsgliLHDLIRnlsgdgsvAELRISchsfgpsglkevpkkgvmvgytcrlatperhksivkpealnSTLINVVHHFhlrdgfeyvnvNRSMLVINHYKYQVWEVFKDKFLRRVATYVADwqdtqnvgskdrvpglgtraieppdwsgrfcevndTALRDRVLeyadpvthllpwqqVTNSLVVEG
Flexible Loop (DISEMBL)
mmmerrnrdVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRpalgstwrapimratgdeSPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVyypanssrpfelklKQPPIRIDGRDFDEQILRCRIPPRgfnisldlnrhRNIINIPVGYVHRWDSVSYeavfdrdnttlvfikglnlrrdraynpsrfecvygwdFRRIKFLLRSELLSIGQEVGrcetplsvlsgphrdDFIKVSIRLKGkgifrtvahpvrlsgpeppaekdhEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHsfgpsglkevpkkgVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYvadwqdtqnvgskdrvpglgtraieppdwsgrfCEVNDTALRDRVLEYAdpvthllpwqqvtnslvveg
Low Complexity Region (SEG)
MMMERRNRDVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPHRDDFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLEYADPVTHLLPWQQVTNSLVVEG
Disordered region (IsUnstruct)
*********VVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPHRDDFIKVSIRLKGKGIFRTVAHPVR************EMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLEYADPVTHLLPWQQVTNSLV***
Disordered Region (DISOPRED)
*************HRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWR******************LRETVMLPDQVLLFLKYPRPA*LFTEEDFQCVYYPANSSRPF*LKLKQPPIRIDGRDFDEQILRCRIPPR**********************HRWDSVSYEAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPHRDDFIKVSIRLK****FR******************HEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLEYADPVTHLLPWQQVTNSLVVE*
Disordered Region (DISEMBL)
*********VVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPHRDDFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLEYADPVTHLLPWQQVTNSLVVEG
Disordered Region (DISPRO)
****RRNRDVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPHRDDFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLEYADPVTHLLPWQQVTNSL****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMMERRNRDVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPHRDDFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLEYADPVTHLLPWQQVTNSLVVEG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	560	2.2.26 [Sep-21-2011]
B9SLR1	552	UPF0392 protein RCOM_0530	N/A	no	0.964	0.978	0.644	0.0
Q6YRM6	584	UPF0392 protein Os08g0121	yes	no	0.869	0.833	0.485	1e-144
B9S2H4	578	UPF0392 protein RCOM_0530	N/A	no	0.889	0.861	0.451	1e-124
Q94K98	575	UPF0392 protein At1g27200	no	no	0.832	0.810	0.468	1e-122

>sp|B9SLR1|Y231_RICCO UPF0392 protein RCOM_0530710 OS=Ricinus communis GN=RCOM_0530710 PE=3 SV=1

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/560 (64%), Positives = 435/560 (77%), Gaps = 20/560 (3%)

Query: 2   MMERRNRDVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRA 61
           M +RR R+ V  +RF    L ++ SCV    FT STFR    E+F+P + S WR P M A
Sbjct: 1   MKDRRRRETVSWNRFFWCTLLLVLSCVL---FTASTFR----EKFQPEIVSAWRQPAMEA 53

Query: 62  T----GDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFEL 117
           T       SP    +S+RETVMLPDQVL+F+ YP+ +RLFT+EDF CVY+  NS+   E 
Sbjct: 54  TTTIMSTNSPAKPSISIRETVMLPDQVLIFVNYPQSSRLFTKEDFSCVYFSRNSTSLSET 113

Query: 118 KLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVF 177
           +LK+PP +IDG D + QI+RC + PRGF++SL+L      IN   G  HRWDS+ YEA+ 
Sbjct: 114 QLKKPPNQIDGTDVNNQIVRCPLNPRGFSVSLELKSGGGYIN--PGPTHRWDSLVYEAMI 171

Query: 178 DRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLS 237
           DRDNTT+VF+KG NLR DR YN S+FECVYGWDFR+ KF+LRS ++SI QE+ RC+TPLS
Sbjct: 172 DRDNTTVVFVKGFNLRADRIYNASKFECVYGWDFRKTKFVLRSNVISIAQEIVRCQTPLS 231

Query: 238 VLSGPHR-DDFIKVSIRLKGKGIFRTVAHP--VRLSGPEPP--AEKDHEMCICTMLRNQA 292
           +L+   + ++ IKVSIRLKGKG   ++A P    L+ PEP    EK HEMCICTMLRNQ 
Sbjct: 232 ILNNQLKVNNAIKVSIRLKGKGTLHSIARPGVQLLTDPEPGLRGEKPHEMCICTMLRNQG 291

Query: 293 RFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAH 352
           RF++EWVMYH++IGV+RWFIYDNNS D+I+SVI+SL   KFNI+RHVWPW+K QEAGFAH
Sbjct: 292 RFLKEWVMYHSQIGVERWFIYDNNSEDDIDSVIESLIDAKFNISRHVWPWVKAQEAGFAH 351

Query: 353 CALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGS-VAELRISCHSFGPSGLKE 411
           CALRAR +C WVGFIDVDEFF LP+GL L D ++N S  G+ VAELR+SCHSFGPSGLK 
Sbjct: 352 CALRARGLCEWVGFIDVDEFFHLPTGLNLQDAVKNQSNSGNNVAELRVSCHSFGPSGLKH 411

Query: 412 VPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINH 471
           VP +GV VGYTCR+  PERHKSIVKPEALNSTLINVVHHFHLRDGF YVN ++ +LVINH
Sbjct: 412 VPAQGVTVGYTCRMMLPERHKSIVKPEALNSTLINVVHHFHLRDGFRYVNADKGILVINH 471

Query: 472 YKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTA 531
           YKYQVWEVFK+KF RRVATYV DWQ+ QNVGSKDR PGLGTRA+EPPDWS RFCEV+DT 
Sbjct: 472 YKYQVWEVFKEKFYRRVATYVVDWQNEQNVGSKDRAPGLGTRAVEPPDWSSRFCEVSDTG 531

Query: 532 LRDRVLE-YADPVTHLLPWQ 550
           LRDR+L+ + DP+T LLPWQ
Sbjct: 532 LRDRILQNFLDPLTDLLPWQ 551

Ricinus communis (taxid: 3988)

>sp|Q6YRM6|Y8219_ORYSJ UPF0392 protein Os08g0121900 OS=Oryza sativa subsp. japonica GN=Os08g0121900 PE=2 SV=1

 Score =  512 bits (1319), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/535 (48%), Positives = 347/535 (64%), Gaps = 48/535 (8%)

Query: 46  FRPALGSTWRAPIMRATGDE-----------SPISLGVSLRETVMLPDQVLLFLKYPRPA 94
           FRP L + W +  + A   E             +   V ++  V LPD VLL L+    +
Sbjct: 67  FRPVLKTAWPSATLNAVSSERGAQQAGMVSVDAVLPSVHIQHAVALPDHVLLMLR--DGS 124

Query: 95  RLFTEEDFQCVYYPANSSRPFELKLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRH 154
            L     F+C+Y P NSS     +L++ P+ +        ++ C   P    +SL L + 
Sbjct: 125 LLPASGQFECLYSPVNSS-----QLRRQPLSVATLPDGPSLVHCPAGPSRVAVSLSLAQ- 178

Query: 155 RNIINIPVGYVHRWDSVSYEAVFD-RDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRR 213
               ++PV  + +WD + Y A+ D +DN+T+VF KG+NLR  R   PSR+ECV+G DF +
Sbjct: 179 ----SVPVAPL-QWDRLVYTALIDSKDNSTVVFAKGMNLRPGRLGVPSRYECVFGRDFSK 233

Query: 214 IKFLLRSELLSIGQEVGRCETPLSVL-----------SGPHRDDFIKVSIRLKGKGIFRT 262
            K ++ S ++S  QE+ RC TP+ +            S  + D  + VSIR KG+G    
Sbjct: 234 PKLVVTSPVVSAAQEIFRCVTPVRIRRYLRMTTGGKNSVNNDDKPMLVSIRTKGRGSSTL 293

Query: 263 VAHPVRLSGPEPPAE-------KDHEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDN 315
            +    ++ PEP          K H MC+CTMLRNQARF+REW++YH+RIGVQRWFIYDN
Sbjct: 294 PS----IAQPEPLPRYNKHWRRKAHSMCVCTMLRNQARFLREWIIYHSRIGVQRWFIYDN 349

Query: 316 NSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRL 375
           NS+D IE V++++ S ++N+TR++WPW+K+QEAGFAHCALRAR+ C WVGFID+DEF   
Sbjct: 350 NSDDGIEEVLNTMDSSRYNVTRYLWPWMKSQEAGFAHCALRARESCEWVGFIDIDEFLHF 409

Query: 376 PSGLILHDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIV 435
           P    L D++RN S    + ELR +CHSFGPSG  ++PKKGV  GYTCRLA PERHKSIV
Sbjct: 410 PGNQTLQDVLRNYSVKPRIGELRTACHSFGPSGRTKIPKKGVTTGYTCRLAAPERHKSIV 469

Query: 436 KPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADW 495
           +P+ALN +LINVVHHFHL++G +YVN+ + M++INHYKYQVWEVFKDKF  RVATYVADW
Sbjct: 470 RPDALNPSLINVVHHFHLKEGMKYVNIGQGMMLINHYKYQVWEVFKDKFSGRVATYVADW 529

Query: 496 QDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLE-YADPVTHLLPW 549
           QD +NVGS+DR PGLGT+ +EP DW  RFCEV D  L+D V + + DP T  LPW
Sbjct: 530 QDEENVGSRDRAPGLGTKPVEPEDWPRRFCEVYDNGLKDFVQKVFTDPHTGNLPW 584

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B9S2H4|Y232_RICCO UPF0392 protein RCOM_0530710 OS=Ricinus communis GN=RCOM_0699480 PE=3 SV=1

 Score =  445 bits (1145), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/531 (45%), Positives = 323/531 (60%), Gaps = 33/531 (6%)

Query: 46  FRPALG---STWRAPIMRATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDF 102
           FRP L    S    P+          SL + + + V+LPD VLL +      ++ T ++ 
Sbjct: 53  FRPVLNVPVSLLPTPLGLTRDSFDTKSLPLIVEDRVLLPDHVLLIVS----NKVATSQNL 108

Query: 103 QCVYYPANSSRPFELKLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDL----NRHRNII 158
            CVY    +S    LK   P + ++    D+ I+RC++PP  ++ ++ L         + 
Sbjct: 109 DCVYSNLYNSHDVVLK---PALSVNQYHRDKSIVRCQLPPNNYSAAVYLRWSWEAAEGVA 165

Query: 159 NIPVGYVHRWDSVSYEAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWD-FRRIK-F 216
                 V  WD V YEA+ D  NT  VF+KGLNLR  +  + S+F C +G   F + +  
Sbjct: 166 AAAPASVVSWDRVVYEAMLDW-NTVAVFVKGLNLRPHKESDSSKFRCHFGLSKFDKDEGI 224

Query: 217 LLRSELLSIGQEVGRCETPLSVLSGPHRDDFIKVS---IRLKGKGIFRTVAHPVRLSGPE 273
           +  +E ++  QEV RC  P S+ + P +   I+V+   I     G+   +    ++ G +
Sbjct: 225 VFTTEAITAAQEVIRCLLPRSIRNNPVKAQGIRVTVSRINAGEDGVDAPLPSVAKVYGAK 284

Query: 274 PPAEKD----HEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLS 329
              ++     +E+C CTML NQA F+ EW+ YHA +GVQRWFIYDNNS+D I+ V+D L+
Sbjct: 285 SYEKRSNRGKYELCACTMLWNQASFLHEWITYHAWLGVQRWFIYDNNSDDGIQEVVDELN 344

Query: 330 SEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLP--------SGLIL 381
            + +N+TRH WPWIK QEAGF+HCALRAR  C W+GF DVDEFF LP            L
Sbjct: 345 LQNYNVTRHSWPWIKAQEAGFSHCALRARSECKWLGFFDVDEFFYLPRHRGQDMLGENSL 404

Query: 382 HDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALN 441
             L+ N S   + AE+R  CHSFGPSGL   P +GV VGYTCRL  PERHKSIV+PE L+
Sbjct: 405 RTLVANYSDSSTYAEIRTICHSFGPSGLTSAPSQGVTVGYTCRLQAPERHKSIVRPELLD 464

Query: 442 STLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNV 501
           +TL+NVVHHF L++G+ Y+NV  S  V+NHYKYQVW+ FK KF RRV+TYVA+WQ+ QN 
Sbjct: 465 TTLLNVVHHFKLKEGYRYLNVPESTAVVNHYKYQVWDTFKAKFFRRVSTYVANWQEDQNQ 524

Query: 502 GSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVL-EYADPVTHLLPWQQ 551
           GSKDR PGLGT AIEPPDW  RFCEV DT L+D VL  +AD  +  LPW++
Sbjct: 525 GSKDRAPGLGTVAIEPPDWRLRFCEVWDTGLKDFVLANFADTASGYLPWER 575

Ricinus communis (taxid: 3988)

>sp|Q94K98|Y1720_ARATH UPF0392 protein At1g27200 OS=Arabidopsis thaliana GN=At1g27200 PE=2 SV=2

 Score =  441 bits (1133), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/502 (46%), Positives = 313/502 (62%), Gaps = 36/502 (7%)

Query: 72  VSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQPPIRIDGRDF 131
           +S+ + V  PD +LL L +        E++  CVY         E  L  P I  D  D 
Sbjct: 84  LSVEDRVQFPDHLLLILSHGIGK---GEKNLVCVYRGVK-----EETLVLPSISSDEFDE 135

Query: 132 DEQILRCRIPPRGFNISLDLNRHRNIINIPVGY----VHRWDSVSYEAVFDRDNTTLVFI 187
              I+RC   P  ++ S+DL    +++   +      VH W+ V YEAV D D T +VF+
Sbjct: 136 FRSIVRCPNAPLNYSSSVDLQFRGDLVKKKMKKQSRRVHNWEKVGYEAVIDGD-TVVVFV 194

Query: 188 KGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPH---R 244
           KGL  R  +  +PS ++C +  +    K +  ++ ++  QEV RC  P S+   P    R
Sbjct: 195 KGLTRRPHKESDPSYYKCQFEIENSEEKEV--TQAIAAAQEVVRCGLPESLKLNPEMMFR 252

Query: 245 DDFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKD------HEMCICTMLRNQARFIREW 298
              I +  R +      +VA   R+ G +   +K+      HE+C+CTML NQA F+REW
Sbjct: 253 VSVIHIDPRGRTTPALPSVA---RIYGSDSIEKKEKKSGVKHELCVCTMLWNQAPFLREW 309

Query: 299 VMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRAR 358
           +MYH+ +GV+RWFIYDNNS+D I+  I+ LSSE +N++RHVWPWIKTQEAGF+HCA+RA+
Sbjct: 310 IMYHSWLGVERWFIYDNNSDDGIQEEIELLSSENYNVSRHVWPWIKTQEAGFSHCAVRAK 369

Query: 359 DVCNWVGFIDVDEFFR--------LPSGLILHDLIRNLSGDGSVAELRISCHSFGPSGLK 410
           + CNWVGF DVDEF+         LPS   L  L+ N +    V E+R  CHS+GPSGL 
Sbjct: 370 EECNWVGFFDVDEFYYFPTHRSQGLPSKNALKSLVSNYTSWDLVGEIRTDCHSYGPSGLT 429

Query: 411 EVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVIN 470
            VP +GV VGYTCR A PERHKSI++PE L S+L+N VHHF L++G  ++++  S+ V+N
Sbjct: 430 SVPSQGVTVGYTCRQANPERHKSIIRPELLTSSLLNEVHHFQLKEGVGHMSLVESVAVVN 489

Query: 471 HYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDT 530
           HYKYQVW+ FK KF RRVATYV DWQ+ QN GSKDR PGLGT AIEPPDW  RFCEV DT
Sbjct: 490 HYKYQVWDTFKAKFYRRVATYVVDWQENQNQGSKDRAPGLGTEAIEPPDWKRRFCEVWDT 549

Query: 531 ALRDRVLE-YADPVTHLLPWQQ 551
            L+D V+  +AD VT  LPWQ+
Sbjct: 550 GLKDLVMSNFADQVTGYLPWQR 571

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	560
255571978	552	ubiquitin-protein ligase, putative [Rici	0.964	0.978	0.644	0.0
225452208	908	PREDICTED: UPF0392 protein RCOM_0530710-	0.969	0.598	0.651	0.0
296081314	1019	unnamed protein product [Vitis vinifera]	0.969	0.532	0.651	0.0
224060199	915	predicted protein [Populus trichocarpa]	0.976	0.597	0.641	0.0
449441402	556	PREDICTED: UPF0392 protein RCOM_0530710-	0.892	0.899	0.626	0.0
307136236	555	ubiquitin-protein ligase [Cucumis melo s	0.892	0.900	0.626	0.0
357448369	563	hypothetical protein MTR_2g028920 [Medic	0.957	0.952	0.529	1e-166
356574020	937	PREDICTED: UPF0392 protein RCOM_0530710-	0.948	0.566	0.538	1e-166
297818318	917	zinc finger family protein [Arabidopsis	0.951	0.581	0.524	1e-165
15237478	583	uncharacterized protein [Arabidopsis tha	0.957	0.919	0.520	1e-165

>gi|255571978|ref|XP_002526930.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|325530316|sp|B9SLR1.1|Y231_RICCO RecName: Full=UPF0392 protein RCOM_0530710 gi|223533682|gb|EEF35417.1| ubiquitin-protein ligase, putative [Ricinus communis]

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/560 (64%), Positives = 435/560 (77%), Gaps = 20/560 (3%)

Query: 2   MMERRNRDVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRA 61
           M +RR R+ V  +RF    L ++ SCV    FT STFR    E+F+P + S WR P M A
Sbjct: 1   MKDRRRRETVSWNRFFWCTLLLVLSCVL---FTASTFR----EKFQPEIVSAWRQPAMEA 53

Query: 62  T----GDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFEL 117
           T       SP    +S+RETVMLPDQVL+F+ YP+ +RLFT+EDF CVY+  NS+   E 
Sbjct: 54  TTTIMSTNSPAKPSISIRETVMLPDQVLIFVNYPQSSRLFTKEDFSCVYFSRNSTSLSET 113

Query: 118 KLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVF 177
           +LK+PP +IDG D + QI+RC + PRGF++SL+L      IN   G  HRWDS+ YEA+ 
Sbjct: 114 QLKKPPNQIDGTDVNNQIVRCPLNPRGFSVSLELKSGGGYIN--PGPTHRWDSLVYEAMI 171

Query: 178 DRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLS 237
           DRDNTT+VF+KG NLR DR YN S+FECVYGWDFR+ KF+LRS ++SI QE+ RC+TPLS
Sbjct: 172 DRDNTTVVFVKGFNLRADRIYNASKFECVYGWDFRKTKFVLRSNVISIAQEIVRCQTPLS 231

Query: 238 VLSGPHR-DDFIKVSIRLKGKGIFRTVAHP--VRLSGPEPP--AEKDHEMCICTMLRNQA 292
           +L+   + ++ IKVSIRLKGKG   ++A P    L+ PEP    EK HEMCICTMLRNQ 
Sbjct: 232 ILNNQLKVNNAIKVSIRLKGKGTLHSIARPGVQLLTDPEPGLRGEKPHEMCICTMLRNQG 291

Query: 293 RFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAH 352
           RF++EWVMYH++IGV+RWFIYDNNS D+I+SVI+SL   KFNI+RHVWPW+K QEAGFAH
Sbjct: 292 RFLKEWVMYHSQIGVERWFIYDNNSEDDIDSVIESLIDAKFNISRHVWPWVKAQEAGFAH 351

Query: 353 CALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGS-VAELRISCHSFGPSGLKE 411
           CALRAR +C WVGFIDVDEFF LP+GL L D ++N S  G+ VAELR+SCHSFGPSGLK 
Sbjct: 352 CALRARGLCEWVGFIDVDEFFHLPTGLNLQDAVKNQSNSGNNVAELRVSCHSFGPSGLKH 411

Query: 412 VPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINH 471
           VP +GV VGYTCR+  PERHKSIVKPEALNSTLINVVHHFHLRDGF YVN ++ +LVINH
Sbjct: 412 VPAQGVTVGYTCRMMLPERHKSIVKPEALNSTLINVVHHFHLRDGFRYVNADKGILVINH 471

Query: 472 YKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTA 531
           YKYQVWEVFK+KF RRVATYV DWQ+ QNVGSKDR PGLGTRA+EPPDWS RFCEV+DT 
Sbjct: 472 YKYQVWEVFKEKFYRRVATYVVDWQNEQNVGSKDRAPGLGTRAVEPPDWSSRFCEVSDTG 531

Query: 532 LRDRVLE-YADPVTHLLPWQ 550
           LRDR+L+ + DP+T LLPWQ
Sbjct: 532 LRDRILQNFLDPLTDLLPWQ 551

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452208|ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/554 (65%), Positives = 427/554 (77%), Gaps = 11/554 (1%)

Query: 2   MMERRNRDVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRA 61
           M ERR RD     RF      V+FSCV + G TFSTF + F E+FRP L S+WR   M A
Sbjct: 1   MKERRKRDAGSWGRFFWCTFFVVFSCVVVTGVTFSTFSI-FGEKFRPVLVSSWRKQAMEA 59

Query: 62  TGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQ 121
              ES I   +S+RETV+ PDQ L+FLKYP  ARLFT++D  C+Y+  NSS   +  +K 
Sbjct: 60  IAGESFIPPAISIRETVIFPDQELVFLKYPPSARLFTKDDLDCLYFSPNSS---DSHIKL 116

Query: 122 PPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDRDN 181
           PP  +DG   D QI+RC   PRGF +SL L    N +  P G  H+WDS+ YEA+ DRDN
Sbjct: 117 PPEDVDGETRDHQIVRCPRRPRGFTLSLVLKS--NALLRP-GPTHQWDSLVYEALIDRDN 173

Query: 182 TTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSG 241
           TT+ F+KGLNLR DRA +P+RFECVYGWDFR+ +FLLRSE++SI QEV RC TPLS+L+ 
Sbjct: 174 TTVAFVKGLNLRPDRASDPTRFECVYGWDFRKPRFLLRSEVVSIAQEVVRCRTPLSILNN 233

Query: 242 PHR-DDFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQARFIREWVM 300
           P R +  IKVS+R+KGKGI  ++A P R S P+PP  K HEMCICTM+RNQARF+REW+M
Sbjct: 234 PQRLNSTIKVSVRMKGKGILNSIAEPKRRSPPDPPIRKQHEMCICTMVRNQARFLREWIM 293

Query: 301 YHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDV 360
           YHA+IGVQRWFIYDNNS DNIE V++SL +   NI+RH+WPWIKTQEAGFAHCALRARD 
Sbjct: 294 YHAQIGVQRWFIYDNNSVDNIEKVLESLETANLNISRHLWPWIKTQEAGFAHCALRARDS 353

Query: 361 CNWVGFIDVDEFFRLPSGLILHDLIRNLS--GDGSVAELRISCHSFGPSGLKEVPKKGVM 418
           C WVGFIDVDEF  LPSG  L D++ N S   + +VAELRISC+SFGPSGL  VP KGV 
Sbjct: 354 CEWVGFIDVDEFLHLPSGASLQDVVWNQSRSANNNVAELRISCYSFGPSGLTSVPPKGVA 413

Query: 419 VGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWE 478
           VGYTCRL+ PERHKSIV+PEALNSTLINVVHHFHLR+GF++VNV+R  +VINHYKYQVWE
Sbjct: 414 VGYTCRLSAPERHKSIVRPEALNSTLINVVHHFHLRNGFDFVNVDRGAMVINHYKYQVWE 473

Query: 479 VFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLE 538
           VFK+KF RRVA YVADWQD +NVGSKDR PGLGTRA+EPPDWS RFCEV DT LRDRVL+
Sbjct: 474 VFKEKFYRRVAAYVADWQDEENVGSKDRAPGLGTRAVEPPDWSTRFCEVTDTGLRDRVLQ 533

Query: 539 -YADPVTHLLPWQQ 551
            + DP TH +PWQ+
Sbjct: 534 IFKDPETHRMPWQE 547

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081314|emb|CBI17696.3| unnamed protein product [Vitis vinifera]

 Score =  729 bits (1883), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/554 (65%), Positives = 427/554 (77%), Gaps = 11/554 (1%)

Query: 2   MMERRNRDVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRA 61
           M ERR RD     RF      V+FSCV + G TFSTF + F E+FRP L S+WR   M A
Sbjct: 34  MKERRKRDAGSWGRFFWCTFFVVFSCVVVTGVTFSTFSI-FGEKFRPVLVSSWRKQAMEA 92

Query: 62  TGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQ 121
              ES I   +S+RETV+ PDQ L+FLKYP  ARLFT++D  C+Y+  NSS   +  +K 
Sbjct: 93  IAGESFIPPAISIRETVIFPDQELVFLKYPPSARLFTKDDLDCLYFSPNSS---DSHIKL 149

Query: 122 PPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDRDN 181
           PP  +DG   D QI+RC   PRGF +SL L    N +  P G  H+WDS+ YEA+ DRDN
Sbjct: 150 PPEDVDGETRDHQIVRCPRRPRGFTLSLVLKS--NALLRP-GPTHQWDSLVYEALIDRDN 206

Query: 182 TTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSG 241
           TT+ F+KGLNLR DRA +P+RFECVYGWDFR+ +FLLRSE++SI QEV RC TPLS+L+ 
Sbjct: 207 TTVAFVKGLNLRPDRASDPTRFECVYGWDFRKPRFLLRSEVVSIAQEVVRCRTPLSILNN 266

Query: 242 PHR-DDFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQARFIREWVM 300
           P R +  IKVS+R+KGKGI  ++A P R S P+PP  K HEMCICTM+RNQARF+REW+M
Sbjct: 267 PQRLNSTIKVSVRMKGKGILNSIAEPKRRSPPDPPIRKQHEMCICTMVRNQARFLREWIM 326

Query: 301 YHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDV 360
           YHA+IGVQRWFIYDNNS DNIE V++SL +   NI+RH+WPWIKTQEAGFAHCALRARD 
Sbjct: 327 YHAQIGVQRWFIYDNNSVDNIEKVLESLETANLNISRHLWPWIKTQEAGFAHCALRARDS 386

Query: 361 CNWVGFIDVDEFFRLPSGLILHDLIRNLS--GDGSVAELRISCHSFGPSGLKEVPKKGVM 418
           C WVGFIDVDEF  LPSG  L D++ N S   + +VAELRISC+SFGPSGL  VP KGV 
Sbjct: 387 CEWVGFIDVDEFLHLPSGASLQDVVWNQSRSANNNVAELRISCYSFGPSGLTSVPPKGVA 446

Query: 419 VGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWE 478
           VGYTCRL+ PERHKSIV+PEALNSTLINVVHHFHLR+GF++VNV+R  +VINHYKYQVWE
Sbjct: 447 VGYTCRLSAPERHKSIVRPEALNSTLINVVHHFHLRNGFDFVNVDRGAMVINHYKYQVWE 506

Query: 479 VFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLE 538
           VFK+KF RRVA YVADWQD +NVGSKDR PGLGTRA+EPPDWS RFCEV DT LRDRVL+
Sbjct: 507 VFKEKFYRRVAAYVADWQDEENVGSKDRAPGLGTRAVEPPDWSTRFCEVTDTGLRDRVLQ 566

Query: 539 -YADPVTHLLPWQQ 551
            + DP TH +PWQ+
Sbjct: 567 IFKDPETHRMPWQE 580

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060199|ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|222847339|gb|EEE84886.1| predicted protein [Populus trichocarpa]

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/558 (64%), Positives = 430/558 (77%), Gaps = 11/558 (1%)

Query: 2   MMERRNRDVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFR--ERFRPALGSTWRAPIM 59
           M +RR RDVV  +RF    L ++FSCV   GFTFSTFR  F   E+F P + STWR P M
Sbjct: 1   MKDRRKRDVVSWNRFFWCTLFLVFSCVLFSGFTFSTFRFFFFFGEKFHPEIVSTWRTPAM 60

Query: 60  RATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKL 119
            A   +S      S+RETV+LPDQVL+FLKYP  +RLFT+ED  CVY  AN S   + + 
Sbjct: 61  EALSGDSSAVPAPSIRETVILPDQVLVFLKYPPSSRLFTKEDLLCVYLSANKSSS-QSQR 119

Query: 120 KQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDR 179
           + PP  IDG+D D+QI+RC + PRG+ +SL L   ++   I  G  H+WDS+ YEA+ DR
Sbjct: 120 RLPPNHIDGKDVDDQIVRCPLIPRGYTVSLAL---KSGGYIHPGPTHKWDSLVYEALIDR 176

Query: 180 DNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVL 239
           DNTT+VF+KGLNLR ++  N SRFECVYGWDFRR KFLLRS+++S+ QE+ RC+TPLSVL
Sbjct: 177 DNTTVVFVKGLNLRPEKLSNASRFECVYGWDFRRPKFLLRSQVISMAQEIVRCKTPLSVL 236

Query: 240 SGPHR-DDFIKVSIRLKGKGIFRTVAHPVRLSGPEP--PAEKDHEMCICTMLRNQARFIR 296
             P   +  IK SIR+KG+G   ++A P   S P+P  P  K HEMCICTMLRNQARF+R
Sbjct: 237 GAPQMVNSSIKASIRVKGRGTLHSIARPGLRSKPQPGPPERKPHEMCICTMLRNQARFLR 296

Query: 297 EWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALR 356
           EWVMYHA++GVQ W+IYDNNS+D+IE V++SL    FNI+RHVWPWIKTQEAGFAHCALR
Sbjct: 297 EWVMYHAQVGVQSWYIYDNNSDDDIEDVMESLVQAGFNISRHVWPWIKTQEAGFAHCALR 356

Query: 357 ARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGS-VAELRISCHSFGPSGLKEVPKK 415
           AR+ C WVGFIDVDEFF  P GL LHD+I N SG G+ VAE+R SC+SFGPSGLK +P +
Sbjct: 357 ARESCEWVGFIDVDEFFYSPLGLSLHDVISNQSGSGNNVAEIRTSCYSFGPSGLKHLPPQ 416

Query: 416 GVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQ 475
           GVMVGYTCRL  PERHKSIVKPEALNSTLINVVHHFHL +GF YVN +R +L INHYKYQ
Sbjct: 417 GVMVGYTCRLGAPERHKSIVKPEALNSTLINVVHHFHLSEGFRYVNADRGVLAINHYKYQ 476

Query: 476 VWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDR 535
           VWEVFK+KF RRVATYVADWQ+ QNVGSKDR PGLGTRA+EPPDWS RFCEV DT LR+ 
Sbjct: 477 VWEVFKEKFYRRVATYVADWQNEQNVGSKDRAPGLGTRAVEPPDWSSRFCEVTDTGLRNL 536

Query: 536 VLE-YADPVTHLLPWQQV 552
           VL+ + DP+T+ LPW+++
Sbjct: 537 VLQKFMDPLTNHLPWEEL 554

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441402|ref|XP_004138471.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus] gi|449524792|ref|XP_004169405.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/509 (62%), Positives = 391/509 (76%), Gaps = 9/509 (1%)

Query: 46  FRPALGSTWRAPIMRATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCV 105
           F P L  T   P+ +A  D+S +    SL+ETV LPDQ L+FL +P+  R F +ED  C+
Sbjct: 36  FSPELVHTLPTPLNKALSDDSSLHFRSSLQETVTLPDQALVFLNHPQTVRPFAKEDINCL 95

Query: 106 YYPANSSRPFELKLKQPPIRIDGRD-FDEQILRCRIPPRGFNISLDLNRHRNIINIPVGY 164
           Y+PANSS P   +   PPI +DG +   +Q++RC +PP GF +S+   R R+   +  G+
Sbjct: 96  YFPANSSVPHSWR---PPIDVDGEEHLRKQMVRCPLPPPGFTVSI---RVRSNAQLQGGH 149

Query: 165 VHRWDSVSYEAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLS 224
            HRWD + YEA+ DRDN+T+VF+KGL LR +R  N S+FECVYGWDFR+IK++LRS ++S
Sbjct: 150 SHRWDLLVYEALVDRDNSTVVFVKGLGLRPERVSNASKFECVYGWDFRKIKYVLRSNVMS 209

Query: 225 IGQEVGRCETPLSVLSGPHRD-DFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMC 283
           I QE+ RC TP SVLS P+R  D +KVSIR+KG G   ++A P+   G   P  K HEMC
Sbjct: 210 IAQEIARCTTPRSVLSNPNRTHDSVKVSIRVKGGGTLNSIARPLLSPGLRTPDRKPHEMC 269

Query: 284 ICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWI 343
           ICTMLRNQA+F++EWV+YHA IGV+RWF+YDNNS+D+IE VI S+ S K NI+RH+WPWI
Sbjct: 270 ICTMLRNQAQFLKEWVIYHAHIGVRRWFVYDNNSDDDIEDVIASIFSVKHNISRHIWPWI 329

Query: 344 KTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHS 403
           KTQEAGFAHCALRARD C WVGFIDVDEFF LPSGL L D++RN + + SV E+R+SCHS
Sbjct: 330 KTQEAGFAHCALRARDSCKWVGFIDVDEFFYLPSGLSLLDVLRNQAKNVSVGEIRVSCHS 389

Query: 404 FGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVN 463
           FGPSGL ++P +GV VGYTCR AT ERHKSIV PE LNSTLINVVHHFHLRDGF Y+N+ 
Sbjct: 390 FGPSGLTQMPPQGVTVGYTCRKATAERHKSIVNPEVLNSTLINVVHHFHLRDGFHYMNLE 449

Query: 464 RSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGR 523
           RS +VINHYKYQVWEVFK+KF RRVATYVADWQ+ QN GSKDR PGLGT+A+EP DWS R
Sbjct: 450 RSEMVINHYKYQVWEVFKEKFYRRVATYVADWQEDQNAGSKDRAPGLGTKAVEPEDWSSR 509

Query: 524 FCEVNDTALRDRVLE-YADPVTHLLPWQQ 551
           FCEVNDT LRD VL+   +  THLLPWQ+
Sbjct: 510 FCEVNDTGLRDVVLQNLTNRRTHLLPWQE 538

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307136236|gb|ADN34072.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/509 (62%), Positives = 389/509 (76%), Gaps = 9/509 (1%)

Query: 46  FRPALGSTWRAPIMRATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCV 105
           F   L  T   P+ +A  D+S +    SL+ETV LPDQ L+FL +P+  R F +ED  CV
Sbjct: 36  FSSELVHTLPNPLNKALYDDSSLHFLSSLQETVTLPDQALVFLNHPQTVRPFPKEDINCV 95

Query: 106 YYPANSSRPFELKLKQPPIRIDGRD-FDEQILRCRIPPRGFNISLDLNRHRNIINIPVGY 164
           Y+ ANSS P   +   PPI +DG +   +Q++RC +PP GF +S+   R R+   +  G 
Sbjct: 96  YFAANSSVPHRWR---PPIDVDGEEHLQKQMVRCPLPPPGFTVSI---RVRSNPQLQGGN 149

Query: 165 VHRWDSVSYEAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLS 224
            H+WD + YEA+ DRDNTT+VFIKGL LR +R  N S+FECVYGWDFR+IKFLLRS ++S
Sbjct: 150 SHQWDFLVYEALVDRDNTTVVFIKGLGLRPERVSNASKFECVYGWDFRKIKFLLRSNVIS 209

Query: 225 IGQEVGRCETPLSVLSGPHRD-DFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMC 283
           I QE+ RC TPLSVLS P+R  D IKVSIR+KG G   ++A P+       P  K +EMC
Sbjct: 210 IAQEIARCTTPLSVLSNPNRTHDSIKVSIRVKGGGTLNSIARPLLSPRLITPHRKPYEMC 269

Query: 284 ICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWI 343
           +CTMLRNQA+F++EWV+YHA +GV+RWF+YDNNS+D+IE VI S+ + K NI+RH+WPWI
Sbjct: 270 LCTMLRNQAQFLKEWVIYHAHLGVRRWFVYDNNSDDDIEDVIASIFNVKHNISRHIWPWI 329

Query: 344 KTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHS 403
           KTQEAGFAHCALRAR+ C WVGFIDVDEFF LPSGL L D++RN + + SV E+R+SCHS
Sbjct: 330 KTQEAGFAHCALRARNSCKWVGFIDVDEFFFLPSGLSLLDVLRNQAKNASVGEIRVSCHS 389

Query: 404 FGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVN 463
           FGPSGL  +P +GV VGYTCR AT ERHKSIV PE LNSTLINVVHHFHLRDGF Y+N+ 
Sbjct: 390 FGPSGLTRMPPQGVTVGYTCRKATAERHKSIVNPEVLNSTLINVVHHFHLRDGFHYMNLE 449

Query: 464 RSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGR 523
           RS +VINHYKYQVWEVFK+KF RRVATYVADWQ+ QNVGSKDR PGLGT+A+EP DWS R
Sbjct: 450 RSEMVINHYKYQVWEVFKEKFYRRVATYVADWQEEQNVGSKDRAPGLGTKAVEPEDWSSR 509

Query: 524 FCEVNDTALRDRVLE-YADPVTHLLPWQQ 551
           FCEVNDT LRD VL+  A+  THLLPWQ+
Sbjct: 510 FCEVNDTGLRDMVLQNLANRRTHLLPWQE 538

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448369|ref|XP_003594460.1| hypothetical protein MTR_2g028920 [Medicago truncatula] gi|355483508|gb|AES64711.1| hypothetical protein MTR_2g028920 [Medicago truncatula]

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 295/557 (52%), Positives = 383/557 (68%), Gaps = 21/557 (3%)

Query: 1   MMMERRNRDVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFR-PALGSTWRAPIM 59
           M   R++   +    F    + V+ S +       S+    +  RF  P     W     
Sbjct: 1   MKDHRKHSRAISWSTFFWFTIVVVLSSIIFTSLIISSIHPFYLPRFHIPIAALKW----- 55

Query: 60  RATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKL 119
                 +P+   +++RETV+LPD VL+FL YP   R  T+ D QCVY   + S+P   +L
Sbjct: 56  -----PTPVPPQITIRETVLLPDHVLIFLNYPLSFRYHTKRDLQCVYSSDHDSKP---RL 107

Query: 120 KQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDR 179
            Q P+++      EQI+RC IPPRG NISL + +    I I    +H W+ + YEA+FDR
Sbjct: 108 TQEPVQLYSIRLHEQIVRCPIPPRGENISL-MIKSNGPIQIKKSSIHNWEPLVYEALFDR 166

Query: 180 DNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVL 239
           DNTT+VF+KGLNLR ++   PSRF+CVYGWDF +  FL +S++LS+ QE+ RC+TP+S+L
Sbjct: 167 DNTTIVFVKGLNLRPEKLGEPSRFQCVYGWDFTKPNFLFKSDVLSVAQEIIRCKTPISIL 226

Query: 240 SG--PHRDDFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAE-KDHEMCICTMLRNQARFIR 296
           +        ++KVSI+++GK IF ++A P  +S  +P    K HE+CICTMLRNQARFI+
Sbjct: 227 TQVQSQSQAYVKVSIQVEGKKIFPSIARPELISSQKPARRRKPHELCICTMLRNQARFIK 286

Query: 297 EWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALR 356
           EWVMYHA+IGV+RWFIYDNNS+D+IE+VI  L +  +N+T H+W W+KTQEAGFAHCALR
Sbjct: 287 EWVMYHAKIGVERWFIYDNNSDDDIENVIGFLQTAGYNVTWHLWAWVKTQEAGFAHCALR 346

Query: 357 ARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSG--DGSVAELRISCHSFGPSGLKEVPK 414
           A+  C WVGFIDVDEFF +     L  +I + S   D +VAE+R SC+SFGPSGLKEVP+
Sbjct: 347 AQSSCEWVGFIDVDEFFNVKIQGGLKHVIWHYSKSRDNNVAEIRTSCYSFGPSGLKEVPR 406

Query: 415 KGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKY 474
           +GVM+GYTCRLA  ERHKSIV+P+ALN TLINVVHHFHLR  F + +V + ++VINHYKY
Sbjct: 407 EGVMMGYTCRLAERERHKSIVRPDALNQTLINVVHHFHLRRPFMFTDVEKDVMVINHYKY 466

Query: 475 QVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRD 534
           QVW+VFK KF RRVATYVADW+  QNV SKDRVPGLGT+ +EP DWS RFCEV D  LR+
Sbjct: 467 QVWKVFKQKFYRRVATYVADWKKDQNVESKDRVPGLGTKPVEPADWSNRFCEVRDMGLRN 526

Query: 535 RVL-EYADPVTHLLPWQ 550
            V   + D  THL PWQ
Sbjct: 527 WVFNNFMDRRTHLFPWQ 543

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574020|ref|XP_003555151.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 301/559 (53%), Positives = 386/559 (69%), Gaps = 28/559 (5%)

Query: 2   MMERRNRDVVLS-HRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMR 60
           M +RR R+ V+S        L ++FS +      FS F   F   F+    +T  +   R
Sbjct: 1   MKDRRRRNAVVSWSALFWCTLLLVFSTIIFTTLIFSPFITTFSHPFKWIKTTTTNS---R 57

Query: 61  ATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPAN---SSRPFEL 117
           AT         +++RETV+LPDQ L+FL YP   RL+T+ D  CVY+  +   SSR    
Sbjct: 58  AT---------ITIRETVILPDQALIFLNYPPSFRLYTKHDLSCVYFSPDDDSSSR---- 104

Query: 118 KLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIP----VGYVHRWDSVSY 173
            + QPPI++      EQI+RC +PPRG  +SL +    N + IP     G  H W  + Y
Sbjct: 105 GVTQPPIQLHLARLREQIVRCTLPPRGGTVSLLIKS--NGVVIPRQDSSGSTHEWTPLVY 162

Query: 174 EAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCE 233
           +A+FDRDNTT+ F+KGLNLR ++   PSRF+C+YGWDF + KFLL+S+++S  QE+ RC+
Sbjct: 163 DALFDRDNTTVAFVKGLNLRPEKLMEPSRFQCIYGWDFTKPKFLLKSDVVSAAQEIIRCK 222

Query: 234 TPLSVLSGPHRDDFIKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQAR 293
           TP S+L G  +   IKV+I  K  G+F ++A P        P +K HEMCICTMLRNQA 
Sbjct: 223 TPKSILIGKAQAQDIKVTIHAKDMGVFPSIARPGLRLQHTTPKQKAHEMCICTMLRNQAG 282

Query: 294 FIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHC 353
           F++EWVMYHA+IGVQRWFIYDNNS+D+IE+VI  L S  +NI++H+WPW+KTQEAGFAHC
Sbjct: 283 FMKEWVMYHAKIGVQRWFIYDNNSDDDIENVISFLQSVGYNISQHLWPWVKTQEAGFAHC 342

Query: 354 ALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGS-VAELRISCHSFGPSGLKEV 412
           AL+AR  C+WVGFIDVDEFF +     +H +I + +  GS V E+R  C+SFGPSGL+EV
Sbjct: 343 ALQARSSCDWVGFIDVDEFFNVKIKGGMHGVIWHHAKPGSNVGEIRTPCYSFGPSGLREV 402

Query: 413 PKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHY 472
           PK+GV VGYTCRLA  ERHKSIV+PEALN +LINVVHHFHL   F  V+V +S ++INHY
Sbjct: 403 PKEGVAVGYTCRLAARERHKSIVRPEALNQSLINVVHHFHLGAPFVTVDVEKSEMMINHY 462

Query: 473 KYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTAL 532
           KYQVW+VFK+KF RRVATYVADWQ+ QNVGS+DRVPGLGT+ +EP DW+ RFCEV D  L
Sbjct: 463 KYQVWKVFKEKFYRRVATYVADWQEEQNVGSRDRVPGLGTKPVEPADWANRFCEVRDNGL 522

Query: 533 RDRVL-EYADPVTHLLPWQ 550
           R+ VL    D  T LLPWQ
Sbjct: 523 RNWVLRNLEDRRTRLLPWQ 541

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297818318|ref|XP_002877042.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297322880|gb|EFH53301.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 290/553 (52%), Positives = 384/553 (69%), Gaps = 20/553 (3%)

Query: 9   DVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWR---APIMRAT-GD 64
           DVV+S R         F  +F+  F   +   +F+ +FRP + ST     A   RA  G+
Sbjct: 14  DVVVSWRTF-----FWFVILFVFSFVLFSTMFIFKGKFRPVVRSTISFSTAVTARAVLGE 68

Query: 65  ESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQPPI 124
               S  V++RE V LP+Q L+FLKYP+  RLFT+ D  CV+  ++  R      K  P 
Sbjct: 69  SISSSPAVTIREAVKLPEQTLVFLKYPQSLRLFTKNDLICVFSGSSKLR------KVYPT 122

Query: 125 RIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDRDNTTL 184
            +D   F  QI+RC   PRG+ ISL ++R     ++P G  HRWD + Y+AV D DN+T+
Sbjct: 123 AVDRDKFGGQIVRCPETPRGYTISLAVSRWTTDDHLPAGPTHRWDWLVYDAVIDYDNSTV 182

Query: 185 VFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPHR 244
           VF+KGLNLR  R  + SR+ECVYGWDF +   L+RS+++S  QE+ RC TPL+VL GP  
Sbjct: 183 VFVKGLNLRPGRVADVSRYECVYGWDFAKHNRLIRSDVISAAQEIVRCRTPLAVLDGPKS 242

Query: 245 DDF-IKVSIRLKG-KGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQARFIREWVMYH 302
               +KVS+R+KG  G+  ++A PVR+  P  P +K  +MC+CTM RN A  +REWVMYH
Sbjct: 243 ARGPVKVSVRIKGGTGMLPSIAQPVRIINP--PRKKPFQMCVCTMTRNAAAVLREWVMYH 300

Query: 303 ARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCN 362
           A IGVQRWFIYDNNS+D+I + I++L    +NI+RH WPWIKTQEAGF++CA+RA+  C+
Sbjct: 301 AGIGVQRWFIYDNNSDDDIIAEIENLERRGYNISRHFWPWIKTQEAGFSNCAIRAKSDCD 360

Query: 363 WVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYT 422
           W+ FIDVDEFF +PSG  L  +I+N +   S+ E+R  CHSFGPSGL+  P+ GV  GYT
Sbjct: 361 WIAFIDVDEFFYIPSGESLTSVIKNYTSSDSIGEIRTPCHSFGPSGLRSRPRDGVTAGYT 420

Query: 423 CRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKD 482
           CR+  PERHKSI++PEA+N+TLINVVHHFHLRDGF + ++++ ++VINHYKYQVWEVFK+
Sbjct: 421 CRVVLPERHKSIIRPEAMNATLINVVHHFHLRDGFTFADMDKDIMVINHYKYQVWEVFKE 480

Query: 483 KFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLE-YAD 541
           KF RRVATYVADWQ+ +NVGS+DR PGLGTR +EP DW+ RFCEVNDT LRD+V E + D
Sbjct: 481 KFYRRVATYVADWQNEENVGSRDRAPGLGTRPVEPSDWAERFCEVNDTGLRDQVFEKFKD 540

Query: 542 PVTHLLPWQQVTN 554
             T  L W++  +
Sbjct: 541 NKTQRLMWEKAVD 553

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237478|ref|NP_198888.1| uncharacterized protein [Arabidopsis thaliana] gi|9758100|dbj|BAB08544.1| unnamed protein product [Arabidopsis thaliana] gi|332007204|gb|AED94587.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 294/565 (52%), Positives = 388/565 (68%), Gaps = 29/565 (5%)

Query: 2   MMERRNR------DVVLS-HRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTW 54
           M  RR R      DVV+S  RF +     +FS V    F       +F  + RP + S+ 
Sbjct: 1   MKNRRKRGGLSSVDVVVSWRRFFRFVSLFVFSFVLFSAF------FIFLGKIRPVVRSSV 54

Query: 55  RAPIMRATGDESPISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRP 114
            A ++R +    P+   +++ E V  PDQ L+FLKYP  +R FT+ED  CV+   N S  
Sbjct: 55  NA-VLRGS---VPVVKVITIHEAVEFPDQTLIFLKYPPSSRFFTKEDLFCVFSDVNDSSK 110

Query: 115 FELKLKQPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHR-NIINIPVGYVHRWDSVSY 173
                K+ P  ++  D+  QI+RC   PRG  +SL ++R R +  N+ VG  HRWD + Y
Sbjct: 111 L---FKELPFAVETDDYGRQIVRCSAVPRGNTVSLAVSRWRVDDYNLQVGLTHRWDWLVY 167

Query: 174 EAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCE 233
           +AV D DN+T+VF+KGLNLR  +  + SR+ECVYGWDF + K LLR++ +S  QE+ RC+
Sbjct: 168 DAVIDDDNSTVVFVKGLNLRPGKVADASRYECVYGWDFTKPKLLLRAQAISAAQEIVRCK 227

Query: 234 TPLSVLSGPHRDDF--IKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQ 291
           TPL+VL GP R     +KVS+R+KG G+  +VAHP++  G      K  E C+CTM RN 
Sbjct: 228 TPLTVLDGPRRAQSQPVKVSVRIKGSGMLPSVAHPIKRPG-RIKVSKTFETCVCTMTRNA 286

Query: 292 ARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFA 351
           A  +REWVMYHA IGVQRWFIYDNNS+D+I S I +L +  +NI+RH WPWIKTQEAGFA
Sbjct: 287 ANVLREWVMYHAGIGVQRWFIYDNNSDDDIVSEIKNLENRGYNISRHFWPWIKTQEAGFA 346

Query: 352 HCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNL----SGDGSVAELRISCHSFGPS 407
           +CA+RA+  C+WV FIDVDEFF +PSG  L ++IRN     S  G + E+R  CHSFGPS
Sbjct: 347 NCAIRAKSDCDWVAFIDVDEFFYIPSGQTLTNVIRNHTTTPSSSGEIGEIRTPCHSFGPS 406

Query: 408 GLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSML 467
           GL++ P+ GV   YTCR+A PERHKSI++PE+LN+TLINVVHHFHL++ F +V+V++S +
Sbjct: 407 GLRDPPRSGVTAAYTCRMALPERHKSIIRPESLNATLINVVHHFHLKEEFAFVDVDKSTM 466

Query: 468 VINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEV 527
           VINHYKYQVW++FK+KF RRVATYVADWQ+ +NVGSKDR PGLGTR +EP DW+ RFCEV
Sbjct: 467 VINHYKYQVWDIFKEKFKRRVATYVADWQNEENVGSKDRAPGLGTRPVEPTDWAERFCEV 526

Query: 528 NDTALRDRVLE-YADPVTHLLPWQQ 551
           +D  LRD VLE ++D  T  L W++
Sbjct: 527 SDIGLRDWVLEKFSDRKTQRLVWER 551

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	560
TAIR|locus:2168798	583	AT5G40720 "AT5G40720" [Arabido	0.944	0.907	0.528	3.8e-156
TAIR|locus:2086666	913	AT3G27330 [Arabidopsis thalian	0.944	0.579	0.537	5.6e-155
TAIR|locus:2205829	575	AT1G27200 [Arabidopsis thalian	0.95	0.925	0.439	6.2e-117
TAIR|locus:2126392	588	AT4G37420 "AT4G37420" [Arabido	0.667	0.636	0.376	3.5e-68
WB|WBGene00018809	457	F54D10.8 [Caenorhabditis elega	0.423	0.518	0.237	8.5e-05
WB|WBGene00015311	426	C01G5.9 [Caenorhabditis elegan	0.366	0.481	0.229	0.00016
UNIPROTKB|Q5LQ47	793	SPO2649 "Conserved domain prot	0.223	0.157	0.289	0.00056
TIGR_CMR|SPO_2649	793	SPO_2649 "conserved domain pro	0.223	0.157	0.289	0.00056
WB|WBGene00019763	425	galt-1 [Caenorhabditis elegans	0.344	0.454	0.240	0.00057

TAIR|locus:2168798 AT5G40720 "AT5G40720" [Arabidopsis thaliana (taxid:3702)]

 Score = 1522 (540.8 bits), Expect = 3.8e-156, P = 3.8e-156
 Identities = 292/552 (52%), Positives = 386/552 (69%)

Query:     9 DVVLS-HRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRATGDESP 67
             DVV+S  RF +     +FS V      FS F  +F  + RP + S+  A ++R +    P
Sbjct:    14 DVVVSWRRFFRFVSLFVFSFVL-----FSAF-FIFLGKIRPVVRSSVNA-VLRGS---VP 63

Query:    68 ISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQPPIRID 127
             +   +++ E V  PDQ L+FLKYP  +R FT+ED  CV+   N S       K+ P  ++
Sbjct:    64 VVKVITIHEAVEFPDQTLIFLKYPPSSRFFTKEDLFCVFSDVNDSSKL---FKELPFAVE 120

Query:   128 GRDFDEQILRCRIPPRGFNISLDLNRHR-NIINIPVGYVHRWDSVSYEAVFDRDNTTLVF 186
               D+  QI+RC   PRG  +SL ++R R +  N+ VG  HRWD + Y+AV D DN+T+VF
Sbjct:   121 TDDYGRQIVRCSAVPRGNTVSLAVSRWRVDDYNLQVGLTHRWDWLVYDAVIDDDNSTVVF 180

Query:   187 IKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPHRDD 246
             +KGLNLR  +  + SR+ECVYGWDF + K LLR++ +S  QE+ RC+TPL+VL GP R  
Sbjct:   181 VKGLNLRPGKVADASRYECVYGWDFTKPKLLLRAQAISAAQEIVRCKTPLTVLDGPRRAQ 240

Query:   247 F--IKVSIRLKGKGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQARFIREWVMYHAR 304
                +KVS+R+KG G+  +VAHP++  G      K  E C+CTM RN A  +REWVMYHA 
Sbjct:   241 SQPVKVSVRIKGSGMLPSVAHPIKRPG-RIKVSKTFETCVCTMTRNAANVLREWVMYHAG 299

Query:   305 IGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWV 364
             IGVQRWFIYDNNS+D+I S I +L +  +NI+RH WPWIKTQEAGFA+CA+RA+  C+WV
Sbjct:   300 IGVQRWFIYDNNSDDDIVSEIKNLENRGYNISRHFWPWIKTQEAGFANCAIRAKSDCDWV 359

Query:   365 GFIDVDEFFRLPSGLILHDLIRNL----SGDGSVAELRISCHSFGPSGLKEVPKKGVMVG 420
              FIDVDEFF +PSG  L ++IRN     S  G + E+R  CHSFGPSGL++ P+ GV   
Sbjct:   360 AFIDVDEFFYIPSGQTLTNVIRNHTTTPSSSGEIGEIRTPCHSFGPSGLRDPPRSGVTAA 419

Query:   421 YTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVF 480
             YTCR+A PERHKSI++PE+LN+TLINVVHHFHL++ F +V+V++S +VINHYKYQVW++F
Sbjct:   420 YTCRMALPERHKSIIRPESLNATLINVVHHFHLKEEFAFVDVDKSTMVINHYKYQVWDIF 479

Query:   481 KDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLE-Y 539
             K+KF RRVATYVADWQ+ +NVGSKDR PGLGTR +EP DW+ RFCEV+D  LRD VLE +
Sbjct:   480 KEKFKRRVATYVADWQNEENVGSKDRAPGLGTRPVEPTDWAERFCEVSDIGLRDWVLEKF 539

Query:   540 ADPVTHLLPWQQ 551
             +D  T  L W++
Sbjct:   540 SDRKTQRLVWER 551

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2086666 AT3G27330 [Arabidopsis thaliana (taxid:3702)]

 Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
 Identities = 296/551 (53%), Positives = 390/551 (70%)

Query:     9 DVVLSHR-FLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWR---APIMRATGD 64
             DVV+S R F    +  +FS V      FST   +F+ +FRP + ST     A   RA   
Sbjct:    14 DVVVSWRTFFWFVILFVFSFVL-----FSTM-FIFKGKFRPVVRSTISFSTAVTARAVFR 67

Query:    65 ES-PISLGVSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLKQPP 123
             ES   S  V++RE V LP+Q L+FLKYP+  RLFT++D  CV+  + SS+   L+ K  P
Sbjct:    68 ESISSSPAVTIREAVKLPEQTLVFLKYPQSRRLFTKDDLICVF--SGSSK---LR-KVYP 121

Query:   124 IRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGYVHRWDSVSYEAVFDRDNTT 183
               +D   F  QI+RC   PRG+ ISL ++R     ++P G  HR+D + Y+AV D DN+T
Sbjct:   122 TAVDRDKFGGQIVRCPETPRGYTISLAVSRWTTDDHLPAGPTHRYDWLVYDAVIDYDNST 181

Query:   184 LVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPH 243
             +VF+KGLNLR  R  + SR+ECVYGWDF +   L+RS++++  QE+ RC TPL+VL GP 
Sbjct:   182 VVFVKGLNLRPGRVADVSRYECVYGWDFAKHNRLIRSDVITAAQEIVRCRTPLAVLDGPK 241

Query:   244 RDDF-IKVSIRLKG-KGIFRTVAHPVRLSGPEPPAEKDHEMCICTMLRNQARFIREWVMY 301
                  +KVS+R+KG  G+  ++A PVR+  P  P +K  +MC+CTM RN A  +REWVMY
Sbjct:   242 AARGPVKVSVRIKGGTGMLPSIAQPVRIINP--PRKKPFQMCVCTMTRNAAAVLREWVMY 299

Query:   302 HARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVC 361
             HA IGVQRWFIYDNNS+D+I + I++L    +NI+RH WPWIKTQEAGF++CA+RA+  C
Sbjct:   300 HAGIGVQRWFIYDNNSDDDIIAEIENLERRGYNISRHFWPWIKTQEAGFSNCAIRAKSDC 359

Query:   362 NWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGY 421
             +W+ FIDVDEFF +PSG  L  +IRN +   S+ E+R  CHSFGPSGL+  P+ GV  GY
Sbjct:   360 DWIAFIDVDEFFYIPSGETLTSVIRNYTTTDSIGEIRTPCHSFGPSGLRSRPRSGVTSGY 419

Query:   422 TCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFK 481
             TCR+  PERHKSI++PEA+N+TLINVVHHFHLRDGF + ++++ ++VINHYKYQVWEVFK
Sbjct:   420 TCRVVLPERHKSIIRPEAMNATLINVVHHFHLRDGFTFADMDKDIMVINHYKYQVWEVFK 479

Query:   482 DKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPDWSGRFCEVNDTALRDRVLE-YA 540
             +KF RRVATYVADWQ+ +NVGS+DR PGLGTR +EP DW+ RFCEVNDT LRD+V E + 
Sbjct:   480 EKFYRRVATYVADWQNEENVGSRDRAPGLGTRPVEPSDWAERFCEVNDTGLRDQVFEKFK 539

Query:   541 DPVTHLLPWQQ 551
             D  T  L W++
Sbjct:   540 DKKTQRLVWEK 550

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2205829 AT1G27200 [Arabidopsis thaliana (taxid:3702)]

 Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
 Identities = 252/573 (43%), Positives = 340/573 (59%)

Query:     6 RNRDVVLSHRFLKSYLCVIFSCVFLGGFTFSTFRLLFRERFRPALGSTWRAPIMRATGDE 65
             RN+  V      + YL + F C F+  F  S+ R+        +L  + R P +      
Sbjct:    13 RNKQQVKVQFLSQRYLILCFCCFFVLLFFLSSDRISTLSVRSDSLRPSLRVPTLSVLSSS 72

Query:    66 -SPISLG----VSLRETVMLPDQVLLFLKYPRPARLFTEEDFQCVYYPANSSRPFELKLK 120
                   G    +S+ + V  PD +LL L +        E++  CVY         E  L 
Sbjct:    73 MDSFHRGRFPPLSVEDRVQFPDHLLLILSHGIGKG---EKNLVCVYRGVK-----EETLV 124

Query:   121 QPPIRIDGRDFDEQILRCRIPPRGFNISLDLNRHRNIINIPVGY----VHRWDSVSYEAV 176
              P I  D  D    I+RC   P  ++ S+DL    +++   +      VH W+ V YEAV
Sbjct:   125 LPSISSDEFDEFRSIVRCPNAPLNYSSSVDLQFRGDLVKKKMKKQSRRVHNWEKVGYEAV 184

Query:   177 FDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPL 236
              D D T +VF+KGL  R  +  +PS ++C +  +    K +  ++ ++  QEV RC  P 
Sbjct:   185 IDGD-TVVVFVKGLTRRPHKESDPSYYKCQFEIENSEEKEV--TQAIAAAQEVVRCGLPE 241

Query:   237 SVLSGPHRDDFIKVS-IRLKGKGIFRTVAHP--VRLSGPEPPAEKD------HEMCICTM 287
             S+   P      +VS I +  +G   T A P   R+ G +   +K+      HE+C+CTM
Sbjct:   242 SLKLNPEM--MFRVSVIHIDPRGR-TTPALPSVARIYGSDSIEKKEKKSGVKHELCVCTM 298

Query:   288 LRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQE 347
             L NQA F+REW+MYH+ +GV+RWFIYDNNS+D I+  I+ LSSE +N++RHVWPWIKTQE
Sbjct:   299 LWNQAPFLREWIMYHSWLGVERWFIYDNNSDDGIQEEIELLSSENYNVSRHVWPWIKTQE 358

Query:   348 AGFAHCALRARDVCNWVGFIDVDEFFRLPS----GL----ILHDLIRNLSGDGSVAELRI 399
             AGF+HCA+RA++ CNWVGF DVDEF+  P+    GL     L  L+ N +    V E+R 
Sbjct:   359 AGFSHCAVRAKEECNWVGFFDVDEFYYFPTHRSQGLPSKNALKSLVSNYTSWDLVGEIRT 418

Query:   400 SCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDGFEY 459
              CHS+GPSGL  VP +GV VGYTCR A PERHKSI++PE L S+L+N VHHF L++G  +
Sbjct:   419 DCHSYGPSGLTSVPSQGVTVGYTCRQANPERHKSIIRPELLTSSLLNEVHHFQLKEGVGH 478

Query:   460 VNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIEPPD 519
             +++  S+ V+NHYKYQVW+ FK KF RRVATYV DWQ+ QN GSKDR PGLGT AIEPPD
Sbjct:   479 MSLVESVAVVNHYKYQVWDTFKAKFYRRVATYVVDWQENQNQGSKDRAPGLGTEAIEPPD 538

Query:   520 WSGRFCEVNDTALRDRVLE-YADPVTHLLPWQQ 551
             W  RFCEV DT L+D V+  +AD VT  LPWQ+
Sbjct:   539 WKRRFCEVWDTGLKDLVMSNFADQVTGYLPWQR 571

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2126392 AT4G37420 "AT4G37420" [Arabidopsis thaliana (taxid:3702)]

 Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
 Identities = 150/398 (37%), Positives = 216/398 (54%)

Query:   168 WDSVSYEAVFDRDNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSIGQ 227
             W+ V +EA+    +  L+ +KG N        P  F CV+G         +R+ + S  Q
Sbjct:   201 WNFVVFEAISTETDVVLL-VKGPNRGLGSNKPPESFRCVFG---EESDTAIRTAVTSSVQ 256

Query:   228 EVGRCETPLSVLSGPHRDDFIKVSIRLKGKGIFRTVAHP-VRLSGPE----PPAEKDHEM 282
             EV RC  P   +  P     +K+ +     G   T   P V    P+     P EK   +
Sbjct:   257 EVFRCSLPNITIDTP-----VKIYLEAVATGKEETKTVPSVAYYSPKRTLVEPREKSL-L 310

Query:   283 CICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPW 342
             C  TM+ N A+++REWVMYHA IG+QR+ IYDN S+D +  V+  L+SEK+++ + +W W
Sbjct:   311 CATTMVYNVAKYLREWVMYHAAIGIQRFIIYDNGSDDELNDVVKGLNSEKYDVIKVLWIW 370

Query:   343 IKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPS----GLILHDLIRNL--SGDGSVAE 396
              KTQEAGF+H A+   D C W+ ++DVDEF   P+          +IR+L  S    + +
Sbjct:   371 PKTQEAGFSHAAVYGNDTCTWMMYLDVDEFLFSPAWDKQSQPSDQMIRSLLPSDQSMIGQ 430

Query:   397 LRISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHLRDG 456
             +    H FGPS   + P+ GV  GYTCR    +RHKSIV+  A+  +L   +HHF L+  
Sbjct:   431 VSFKSHEFGPSNQTKHPRGGVTQGYTCRREEDQRHKSIVRLSAVEHSLYTAIHHFGLKRE 490

Query:   457 FEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIE 516
             +E+   +    V+NHYKYQ W+ FK KF RRV+ YV DW    N  S+DR PGLG R +E
Sbjct:   491 YEWRVADTEEGVVNHYKYQAWQEFKAKFKRRVSAYVVDWTRVSNPKSRDRTPGLGFRPVE 550

Query:   517 PPDWSGRFCEVNDTALRDRVLE-YADPVT--HLLPWQQ 551
             P  W+ +FCEV D  L+    + +  PV   + + WQ+
Sbjct:   551 PEGWAHKFCEVEDLRLKILTRKWFGYPVKNGYRMAWQR 588

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

WB|WBGene00018809 F54D10.8 [Caenorhabditis elegans (taxid:6239)]

 Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
 Identities = 67/282 (23%), Positives = 117/282 (41%)

Query:   219 RSELLSIGQEVGRCETPLSVLSGPHRD--DFIKVSIRLKGKGIFRTVAHPVRLS--GPEP 274
             R ELL    E      P SV+  P R   +F+ VS      G   +   PVRLS    + 
Sbjct:   116 RRELLGSAYE--SVVFPESVVHCPRRAGAEFVSVS-----SGFNSSTPEPVRLSFKAYDE 168

Query:   275 PAEKDHEMCICTMLRNQARFIR--EWVMYHARIGVQRWFIYDNNSNDNIESVID------ 326
             P   D  +C+  +  N++++++  ++V +    G   ++ Y    ND    ++       
Sbjct:   169 PVH-DLSVCVAPLYGNESKWLQIVDFVEHMKLEGATYFYFYVGTINDYDRKMLTEYVRTG 227

Query:   327 ----SLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILH 382
                 +   +KF    + W  +  Q+     C LR++    W+ F+D+DE  R+ SG   +
Sbjct:   228 DVEVTFLQDKFERPAYAWHLLMMQD-----CHLRSKYHSKWITFLDLDE--RISSGTEYN 280

Query:   383 DLIRNL-SGDGSVAELRISC-----HSFGPSGLKEVP--KKGVMVGYTCRLATP--ERHK 432
             +L+  + S   SV EL +S      +   P     +   K+ +M         P     K
Sbjct:   281 NLLEVIESQPRSVGELHVSVLNILKYEDTPEKFTSMEQLKEDMMFRKWTNTIDPTWNASK 340

Query:   433 SIVKPEALNSTLINVVHHFHLRD-GFEYVNVNRSMLVINHYK 473
             +IV+PE +    I  +H+   +  G   V +N S   + HY+
Sbjct:   341 AIVRPEQIG---IMFIHYAIAKQFGVNTVKLNASQAAVRHYR 379

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00015311 C01G5.9 [Caenorhabditis elegans (taxid:6239)]

 Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
 Identities = 52/227 (22%), Positives = 95/227 (41%)

Query:   273 EPPAEKDHEMCICTMLRNQAR--FIREWVMYHARIGVQRWFIYDNNSNDNIESVID---- 326
             E   + +  +C+  +     +   + E++ Y+   G   + IY  N +   E+V+D    
Sbjct:   169 ETKNKSEFTVCLAPLYGESPKVLMLMEFIEYYKLQGADHFLIYSFNISKETENVLDFYRN 228

Query:   327 SLSSEKF---NITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDE-FFRLPSGLILH 382
             S + E     N T+ +       E     C  R +   +WV  +D+DE    +     L 
Sbjct:   229 SSNLEVIQMGNETKCLNRHRCRHEMQLQDCVFRTQKYSSWVATVDLDERIMMIDEKSTLL 288

Query:   383 DLIRNLSGDGSVAELRISC-----HSFGPSGLKEVPKKGVMVGYTCRLATPERH--KSIV 435
             D IRN + D  ++ELR  C     +S   SG  ++    ++  +      P+ H  KSI+
Sbjct:   289 DYIRNCN-DHKISELRFRCQWTLRYSEISSGAPQIENLPMITWHNTSHVAPQNHTTKSII 347

Query:   436 KPEALNSTLINVVHHFHLRDGFEYVN-VNRSMLVINHYKY-QVWEVF 480
             +   ++S  ++ V  F  R+    V  V   + V+ HY+  + W  F
Sbjct:   348 RSRNVDSMGVHGVQKF--RNPIYGVRLVEPEIAVVRHYRLIKGWSFF 392

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5LQ47 SPO2649 "Conserved domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 129 (50.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
 Identities = 40/138 (28%), Positives = 65/138 (47%)

Query:   288 LRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHV----WPWI 343
             ++N+A +I EWV YH  IGV  + IY N+ +D    ++D L +    + +H     W   
Sbjct:   463 MKNEAPYILEWVAYHRAIGVDNFLIYTNDCSDGTSEILDRLQA--LGVLQHRNNDNWKGN 520

Query:   344 KTQEAGFAHCALRARDVCN--WVGFIDVDEFFRLPSGL-ILHDLIRNLSGDGSVAELRIS 400
               Q+      AL+   + N  W+  IDVDEF  +  G   L D         +VA   ++
Sbjct:   521 SPQQHALNQ-ALKEPVLKNSDWIIHIDVDEFINIRCGNGTLDDFFAAAPDATNVA---MT 576

Query:   401 CHSFGPSGLKEVPKKGVM 418
                FG +G+ E+  + V+
Sbjct:   577 WRLFGHNGVTELKDEFVI 594

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SPO_2649 SPO_2649 "conserved domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 129 (50.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
 Identities = 40/138 (28%), Positives = 65/138 (47%)

Query:   288 LRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHV----WPWI 343
             ++N+A +I EWV YH  IGV  + IY N+ +D    ++D L +    + +H     W   
Sbjct:   463 MKNEAPYILEWVAYHRAIGVDNFLIYTNDCSDGTSEILDRLQA--LGVLQHRNNDNWKGN 520

Query:   344 KTQEAGFAHCALRARDVCN--WVGFIDVDEFFRLPSGL-ILHDLIRNLSGDGSVAELRIS 400
               Q+      AL+   + N  W+  IDVDEF  +  G   L D         +VA   ++
Sbjct:   521 SPQQHALNQ-ALKEPVLKNSDWIIHIDVDEFINIRCGNGTLDDFFAAAPDATNVA---MT 576

Query:   401 CHSFGPSGLKEVPKKGVM 418
                FG +G+ E+  + V+
Sbjct:   577 WRLFGHNGVTELKDEFVI 594

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

WB|WBGene00019763 galt-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 119 (46.9 bits), Expect = 0.00057, P = 0.00057
 Identities = 52/216 (24%), Positives = 92/216 (42%)

Query:   275 PAEKDHEMCICT--MLRN--QARFIREWVMYHARIGVQRWFIYDNNS--NDNIESVIDSL 328
             P E D++M IC   +  N   A+ I E++  +   G+++ +IY N    + +++  +   
Sbjct:   183 PDEYDYKMSICVPALFGNGYDAKRIVEFIELNTLQGIEKIYIYTNQKELDGSMKKTLKYY 242

Query:   329 S-SEKFNITRHVWP------WIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLP--SGL 379
             S + K  +  +  P      W   Q A    C LR   +  +  F D DEFF +P     
Sbjct:   243 SDNHKITLIDYTLPFREDGVWYHGQLATVTDCLLRNTGITKYTFFNDFDEFF-VPVIKSR 301

Query:   380 ILHDLIRNLSGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEA 439
              L + I  L  D ++   R +        +K  P     +    R+ T    K +V+PE 
Sbjct:   302 TLFETISGLFEDPTIGSQRTALKYINAK-IKSAPYSLKNIVSEKRIET-RFTKCVVRPEM 359

Query:   440 LNSTLINVVHHFH--LRDGFEYVNVNRSMLVINHYK 473
             +       +HH    ++D ++ V+   S+L + HYK
Sbjct:   360 VFE---QGIHHTSRVIQDNYKTVSHGGSLLRVYHYK 392


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.141   0.451    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      560       560   0.00099  119 3  11 22  0.46    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  363 KB (2179 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  47.18u 0.10s 47.28t   Elapsed:  00:00:02
  Total cpu time:  47.18u 0.10s 47.28t   Elapsed:  00:00:03
  Start:  Fri May 10 08:38:11 2013   End:  Fri May 10 08:38:14 2013

GO:0016021 "integral to membrane" evidence=IEA

GO:0035250 "UDP-galactosyltransferase activity" evidence=IDA

GO:0043229 "intracellular organelle" evidence=IDA

GO:0006491 "N-glycan processing" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6YRM6	Y8219_ORYSJ	No assigned EC number	0.4859	0.8696	0.8339	yes	no
B9SLR1	Y231_RICCO	No assigned EC number	0.6446	0.9642	0.9782	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00020580001 SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (575 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	560
pfam01697	266	pfam01697, Glyco_transf_92, Glycosyltransferase fa	4e-37
pfam13704	97	pfam13704, Glyco_tranf_2_4, Glycosyl transferase f	3e-10

>gnl|CDD|216651 pfam01697, Glyco_transf_92, Glycosyltransferase family 92

 Score =  137 bits (348), Expect = 4e-37
 Identities = 56/270 (20%), Positives = 102/270 (37%), Gaps = 36/270 (13%)

Query: 278 KDHEMCICTMLRNQARF--IREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNI 335
           K   +C+  +  N+A++  ++E++ YH   G   + IY ++  +    V+         +
Sbjct: 1   KPVVVCVAPLFGNEAKWLQLQEFIEYHKLQGATHFHIYLHSITEYDYKVLKEYEKTG-YV 59

Query: 336 TRHVWP------------WIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSG----L 379
               WP              + Q A    C LR ++   W+ F+D+DE     +      
Sbjct: 60  ELIPWPPGPPYLEPNSNVEWRNQAAAQNDCLLRYKEAAKWIAFLDLDERLVPRNAPTYGE 119

Query: 380 ILHDLIRNL----SGDGSVAELRISCHSFGPSGLKEVPKKGVMVGYTCRLATPER----- 430
              DL+R+L     G        +  +SF PS  +  P + V   Y+CR           
Sbjct: 120 EFLDLLRSLPDISIGSYGFRNQWVVKYSFLPSFFENSPSELVTSLYSCRTRETGLEQEWH 179

Query: 431 HKSIVKPEALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVAT 490
            K IV+PE +NS  I+    F+ ++G + ++V +   VI HY+ Q               
Sbjct: 180 KKCIVRPEKVNSMWIHFPTKFYNKEGNKILHVKKPEGVIRHYRDQEDGE--------DLE 231

Query: 491 YVADWQDTQNVGSKDRVPGLGTRAIEPPDW 520
            V + Q+   +  +       +  I     
Sbjct: 232 KVRNSQEIWKLFLELPKEDFYSTIIWKCYN 261

Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily. Length = 266

>gnl|CDD|222329 pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 10/102 (9%)

Query: 289 RNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEA 348
           RN+A F+ E++ +H  +G   + I DN+S+D    ++ +L      + R    +   ++A
Sbjct: 1   RNEAPFLPEFLAHHRALGFDHFLIVDNDSDDGTAEILAAL--PDVGVIRTDLSY---RDA 55

Query: 349 GFAHCALRA--RDVCN--WVGFIDVDEFFRLPSGLI-LHDLI 385
                 L A  R   +  WV  +D DEF   P G   L  L+
Sbjct: 56  RRQVDWLNALIRRYADGDWVLVLDADEFLVYPPGDRSLRALL 97

Members of this family of prokaryotic proteins include putative glucosyltransferases,. Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	560
PF01697	285	Glyco_transf_92: Glycosyltransferase family 92; In	99.93
cd02511	229	Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4	99.81
PF13704	97	Glyco_tranf_2_4: Glycosyl transferase family 2	99.73
KOG4735	472	consensus Extracellular protein with conserved cys	98.96
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	98.82
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	98.64
COG0463	291	WcaA Glycosyltransferases involved in cell wall bi	98.6
PRK10073	328	putative glycosyl transferase; Provisional	98.59
PRK10063	248	putative glycosyl transferase; Provisional	98.57
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	98.56
PRK11204	420	N-glycosyltransferase; Provisional	98.51
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	98.51
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	98.5
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	98.5
TIGR03111	439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	98.47
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	98.43
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	98.43
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	98.4
PTZ00260	333	dolichyl-phosphate beta-glucosyltransferase; Provi	98.4
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	98.4
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	98.39
cd06437	232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	98.39
PRK14583	444	hmsR N-glycosyltransferase; Provisional	98.38
PRK10714	325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	98.36
cd04188	211	DPG_synthase DPG_synthase is involved in protein N	98.35
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	98.33
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	98.31
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	98.3
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	98.29
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	98.28
cd06913	219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	98.28
PRK13915	306	putative glucosyl-3-phosphoglycerate synthase; Pro	98.26
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	98.25
cd06438	183	EpsO_like EpsO protein participates in the methano	98.25
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	98.23
cd06436	191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	98.23
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	98.23
PRK10018	279	putative glycosyl transferase; Provisional	98.22
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	98.21
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	98.17
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	98.08
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	98.02
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	97.99
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	97.93
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	97.83
PRK11498	852	bcsA cellulose synthase catalytic subunit; Provisi	97.8
cd00761	156	Glyco_tranf_GTA_type Glycosyltransferase family A	97.71
cd02522	221	GT_2_like_a GT_2_like_a represents a glycosyltrans	97.67
TIGR03030	713	CelA cellulose synthase catalytic subunit (UDP-for	97.57
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	97.41
PRK05454	691	glucosyltransferase MdoH; Provisional	97.18
COG1216	305	Predicted glycosyltransferases [General function p	97.14
COG1215	439	Glycosyltransferases, probably involved in cell wa	97.13
PRK14716	504	bacteriophage N4 adsorption protein B; Provisional	97.07
cd04191	254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	96.81
cd04190	244	Chitin_synth_C C-terminal domain of Chitin Synthas	96.78
PF06306	347	CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (	96.57
KOG4735	472	consensus Extracellular protein with conserved cys	96.47
KOG2978	238	consensus Dolichol-phosphate mannosyltransferase [	96.24
KOG2977	323	consensus Glycosyltransferase [General function pr	96.04
PF10111	281	Glyco_tranf_2_2: Glycosyltransferase like family 2	95.68
cd02514	334	GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es	95.56
PRK11234	727	nfrB bacteriophage N4 adsorption protein B; Provis	95.06
PRK15489	703	nfrB bacteriophage N4 adsorption protein B; Provis	86.86
PF04724	356	Glyco_transf_17: Glycosyltransferase family 17; In	85.59
PF03452	269	Anp1: Anp1; InterPro: IPR005109 The members of thi	80.71

>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function

Probab=99.93  E-value=1.4e-25  Score=228.53  Aligned_cols=196  Identities=31%  Similarity=0.602  Sum_probs=149.3

Q ss_pred             CceEEEEEEecchHH--HHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCC---------------
Q 037991          279 DHEMCICTMLRNQAR--FIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWP---------------  341 (560)
Q Consensus       279 ~~~lsVc~i~~NEa~--~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp---------------  341 (560)
                      ++.+|+.++++||.+  .|.|||+||+++|++||+||++++++++.++|+.|++.|. |+.++||               
T Consensus         2 ~~~vCv~pl~~~~~~~~~l~e~ie~~~~~G~~~~~~Y~~~~~~~~~~vL~~Y~~~g~-v~~~~w~~~~~~~~~~~~~~~~   80 (285)
T PF01697_consen    2 DFVVCVSPLFGNEDDWLQLIEWIEYHRLLGVDHFYFYDNSSSPSVRKVLKEYERSGY-VEVIPWPLRPKFPDFPSPFPDP   80 (285)
T ss_pred             cEEEEccchhcccccHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHhHHHHhhcCe-EEEEEcccccccCCcccchhhh
Confidence            356777779999965  9999999999999999999999999999999999999997 9999997               


Q ss_pred             ----CcchHHHHHHHHHHHccCCCcEEEEecCCceeecCC----cchHHHHHHhcCCCCCEeEEEEEeeee-----CCCC
Q 037991          342 ----WIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPS----GLILHDLIRNLSGDGSVAELRISCHSF-----GPSG  408 (560)
Q Consensus       342 ----~~~~Q~~a~ndCl~r~~~~~dWVlflDaDEfL~p~~----~~sI~d~L~~~~~~~~v~ai~~~~~~f-----g~sg  408 (560)
                          +..+|..+++||++|++..++||+|+|+||||.|..    ..++.+++++.... .++++.+....+     ++.+
T Consensus        81 ~~~~~~~~q~~a~~DCl~r~~~~~~~v~f~DiDE~lvP~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~  159 (285)
T PF01697_consen   81 NSSVERRGQIAAYNDCLLRYRYRAKWVAFIDIDEFLVPTNAPTYPEEFEDLLREFPNI-SAGAYSFRNSWFYKYEFGPSF  159 (285)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhceEEEEeccccEEEeccccchhhHHHHHHhhcccc-ceEEEEEeEEEEEecccCccc
Confidence                135789999999999999999999999999999988    45688888887652 567776654433     2222


Q ss_pred             ceecCCCCeEeceeeccCC-------C-CCceEEEeCCccccceecceeeEE-eeC--CeEEEeecCeeeEEEeEeccCh
Q 037991          409 LKEVPKKGVMVGYTCRLAT-------P-ERHKSIVKPEALNSTLINVVHHFH-LRD--GFEYVNVNRSMLVINHYKYQVW  477 (560)
Q Consensus       409 ~~~~p~~~v~~~ft~r~~~-------p-~~~KsIvRp~~v~~~l~~~VH~~~-~~~--G~~~~~v~~~~~~I~HY~~rS~  477 (560)
                      ....+...+...+.++...       + .+.|+|+||+++..+   .+|+.. ..+  |.....++...+.|+||+..+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~IvrP~~v~~~---~~H~~~~~~~~~~~~~~~v~~~~~~i~HYr~~~~  236 (285)
T PF01697_consen  160 YESSPSQLVSSLYFKRFRKTGVKKTRPGHRSKSIVRPEKVNSM---GIHHPWKFYNSSGYKILHVPPEIALINHYRDKSW  236 (285)
T ss_pred             cccchHHhhhcceeeeecccccccccccccceeecChhHeEEE---ecccceeecCCCCceEEEeCcceEEEeccccCcc
Confidence            2112222222222222111       1 236999999999876   578774 334  6666778899999999999884


Q ss_pred             HH
Q 037991          478 EV  479 (560)
Q Consensus       478 e~  479 (560)
                      .+
T Consensus       237 ~~  238 (285)
T PF01697_consen  237 PE  238 (285)
T ss_pred             cc
Confidence            43

The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide

Probab=99.81  E-value=5.9e-19  Score=174.88  Aligned_cols=221  Identities=17%  Similarity=0.132  Sum_probs=141.6

Q ss_pred             eEEEEEEecchHHHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCC
Q 037991          281 EMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDV  360 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~  360 (560)
                      .|+++++++||++.|.++|++...+ .++|+|+|++|+|+|.+|++++   |.+|....|.+.+.|.   |.++..  ..
T Consensus         1 ~isvii~~~Ne~~~l~~~l~sl~~~-~~eiivvD~gStD~t~~i~~~~---~~~v~~~~~~g~~~~~---n~~~~~--a~   71 (229)
T cd02511           1 TLSVVIITKNEERNIERCLESVKWA-VDEIIVVDSGSTDRTVEIAKEY---GAKVYQRWWDGFGAQR---NFALEL--AT   71 (229)
T ss_pred             CEEEEEEeCCcHHHHHHHHHHHhcc-cCEEEEEeCCCCccHHHHHHHc---CCEEEECCCCChHHHH---HHHHHh--CC
Confidence            3789999999999999999987533 4899999999999999999987   6666555555555554   455554  47


Q ss_pred             CcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEe--eeeCCCCceecCCCCeEeceeeccCCCCCceEEEeCC
Q 037991          361 CNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISC--HSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPE  438 (560)
Q Consensus       361 ~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~--~~fg~sg~~~~p~~~v~~~ft~r~~~p~~~KsIvRp~  438 (560)
                      ++||+++|+||++.+.....+.+++.+.+.    ..+.+..  .+.+..  ....           ...|.....+++..
T Consensus        72 ~d~vl~lDaD~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~-----------~~~~~~~~rl~~~~  134 (229)
T cd02511          72 NDWVLSLDADERLTPELADEILALLATDDY----DGYYVPRRNFFLGRW--IRHG-----------GWYPDRQLRLFRRG  134 (229)
T ss_pred             CCEEEEEeCCcCcCHHHHHHHHHHHhCCCC----cEEEEEEEEEEcCee--eecC-----------CCCCCceEEEEECC
Confidence            889999999999987655556666655322    2333332  222211  1100           00112223333333


Q ss_pred             ccccceecceeeEEeeCCeEEEeecCeeeEEEeEeccChHHHHHHHHhhhHHHHHHHHHhhccCCCCCCCCccccccc--
Q 037991          439 ALNSTLINVVHHFHLRDGFEYVNVNRSMLVINHYKYQVWEVFKDKFLRRVATYVADWQDTQNVGSKDRVPGLGTRAIE--  516 (560)
Q Consensus       439 ~v~~~l~~~VH~~~~~~G~~~~~v~~~~~~I~HY~~rS~e~f~~K~~Ry~~~~~~~w~~~~~~~~k~r~p~l~~~~~~--  516 (560)
                      ..... ...+|+.....+... ..  ..+.+.||.+.+++++..|.+||+..    ++++...  +++...+....+.  
T Consensus       135 ~~~~~-~~~vhe~~~~~~~~~-~~--~~~~~~H~~~~~~~~~~~K~~ry~~~----~a~~~~~--~~~~~~~~~~~~~~~  204 (229)
T cd02511         135 KARFE-DGRVHEQVVVDGGVG-IV--LKGDILHYGYKSLEEFLEKHNRYSSL----EAKDLAA--KGKKRSLLKGLLLGR  204 (229)
T ss_pred             CeEEC-CCcccceEEeCCCee-ec--CCCceeCCCCCCHHHHHHHHHHHHHH----HHHHHHH--cCCCccHHHHHHhhh
Confidence            22211 135777755444321 10  56789999999999999999999753    2222222  3334444444333  


Q ss_pred             CCCcccccccccchHHHHhhhh--hccCCCccc
Q 037991          517 PPDWSGRFCEVNDTALRDRVLE--YADPVTHLL  547 (560)
Q Consensus       517 p~~w~~~F~~~~~~~Lk~y~lr--Fldg~~G~~  547 (560)
                      |          ...|++.|++|  |+||+.||.
T Consensus       205 ~----------~~~f~~~y~~~~~~l~G~~g~~  227 (229)
T cd02511         205 P----------LLAFLKMYILKRGFLDGRAGFI  227 (229)
T ss_pred             H----------HHHHHHHHHHhcccCCchhchh
Confidence            3          23569999999  999999974

UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.

>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2

Probab=99.73  E-value=1.6e-17  Score=143.05  Aligned_cols=94  Identities=35%  Similarity=0.604  Sum_probs=75.9

Q ss_pred             cchHHHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCC--cchHHHHHHHHHHHccCCCcEEEE
Q 037991          289 RNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPW--IKTQEAGFAHCALRARDVCNWVGF  366 (560)
Q Consensus       289 ~NEa~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~--~~~Q~~a~ndCl~r~~~~~dWVlf  366 (560)
                      |||+.+|++||+||+.+|+++|||||++|+|+|.++|+++.+.+  +.....|.  ...|....+.|+.++ ...+|+++
T Consensus         1 rne~~~L~~wl~~~~~lG~d~i~i~d~~s~D~t~~~l~~~~~v~--i~~~~~~~~~~~~~~~~~~~~~~~~-~~~dWvl~   77 (97)
T PF13704_consen    1 RNEADYLPEWLAHHLALGVDHIYIYDDGSTDGTREILRALPGVG--IIRWVDPYRDERRQRAWRNALIERA-FDADWVLF   77 (97)
T ss_pred             CChHHHHHHHHHHHHHcCCCEEEEEECCCCccHHHHHHhCCCcE--EEEeCCCccchHHHHHHHHHHHHhC-CCCCEEEE
Confidence            79999999999999999999999999999999999999996433  43333443  235555555665553 68999999


Q ss_pred             ecCCceeecCCc-chHHHHH
Q 037991          367 IDVDEFFRLPSG-LILHDLI  385 (560)
Q Consensus       367 lDaDEfL~p~~~-~sI~d~L  385 (560)
                      +|+|||+.++.. .+|.++|
T Consensus        78 ~D~DEfl~~~~~~~~l~~~L   97 (97)
T PF13704_consen   78 LDADEFLVPPPGRRSLRDFL   97 (97)
T ss_pred             EeeeEEEecCCCCCCHHHhC
Confidence            999999999875 6888875

>KOG4735 consensus Extracellular protein with conserved cysteines [Function unknown]

Probab=98.96  E-value=2e-11  Score=134.05  Aligned_cols=257  Identities=15%  Similarity=0.066  Sum_probs=157.3

Q ss_pred             ceEEEEEeecCCcceeeEeeeeeeeeeeeeecCCCccccCCCCCCceeEEEEEEcCC-e----eccccccccCCCCCCCC
Q 037991          201 SRFECVYGWDFRRIKFLLRSELLSIGQEVGRCETPLSVLSGPHRDDFIKVSIRLKGK-G----IFRTVAHPVRLSGPEPP  275 (560)
Q Consensus       201 ~~~~C~y~~~~~~~~~~~~~~~~s~~q~virC~~p~~i~~~~~~~~~i~VSi~~~~~-~----~iP~i~~~~~~~~~~~~  275 (560)
                      ..++|+|+++..++.......+.-....++.|+-...         .+-++.+..+. .    ++|.+.+..+    +++
T Consensus       125 ~~v~~~w~d~~~~~~~~~~~~s~~~~~~~vs~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~  191 (472)
T KOG4735|consen  125 QFVYEQWQDFLRQEHVSKRFGATHLHLYVVSCPESYF---------ALLKEYEKLGNYVTLPPWLPLKFRNTD----EPY  191 (472)
T ss_pred             hHHHhhHHhhhhheehhhhcCCeeEEEEEEEehHHHH---------HHHHHHHhcCCccccCCCcccccCCCC----CCc
Confidence            6899997777775532122323334556778885432         22233333331 1    3333333321    222


Q ss_pred             CCCCceEEEEEEecchHHHHHHHHHHHhhcCc-cEEEEE-ECCCCcCHHHHHHHhccCCceEEEE-----eCCC-cchHH
Q 037991          276 AEKDHEMCICTMLRNQARFIREWVMYHARIGV-QRWFIY-DNNSNDNIESVIDSLSSEKFNITRH-----VWPW-IKTQE  347 (560)
Q Consensus       276 ~~~~~~lsVc~i~~NEa~~L~EwIe~h~~~Gv-d~f~Iy-Dn~StD~T~eIL~~y~~~G~~Vt~~-----~wp~-~~~Q~  347 (560)
                      .++...+|+-.++++|.++|..|+||++.+|+ |.++|+ -.+.+++..++++.|.+.|. ++.+     .|.. ..+|.
T Consensus       192 ~ep~~~vc~~~~~g~~~d~L~~~~E~~k~~g~~~~~di~~~~~~~~Y~~e~l~~y~~~~~-v~~~~~~~~~~~~~~~~~~  270 (472)
T KOG4735|consen  192 HEPNLNVELRNQAGAETDCLLQYKEAAKFIGFFDLDDILIPRNANTYDEEFLREYVGSGN-IEVIFYQKREHRTVKTWEL  270 (472)
T ss_pred             cCcccceEecccchhhhhHHHHHHHHHHHhccccHhheeeeccCchHHHHHHHHhhcCCC-eeEEEeeeeeeeeeecccc
Confidence            23335566667999999999999999999999 888888 66677899999999999886 4433     2332 35777


Q ss_pred             HHHHHHHHHccCCCcEEEEecCCceeecCCcc--hHHHHHHhcCCCCCEeEEEE--EeeeeCCCCceecCCC-------C
Q 037991          348 AGFAHCALRARDVCNWVGFIDVDEFFRLPSGL--ILHDLIRNLSGDGSVAELRI--SCHSFGPSGLKEVPKK-------G  416 (560)
Q Consensus       348 ~a~ndCl~r~~~~~dWVlflDaDEfL~p~~~~--sI~d~L~~~~~~~~v~ai~~--~~~~fg~sg~~~~p~~-------~  416 (560)
                      ..++||.++++..++|++++|+||++......  ++.++++.... +.++.+.+  +|.......+......       .
T Consensus       271 ~~~~dC~~r~~~~s~~~~~~dide~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~  349 (472)
T KOG4735|consen  271 LQFNDCSLRSLFSSKWSANTDIDEGKVVVRPERLNSTWIHRSINN-PKKAELLFVSSNVIIHKQLPAKFENGWLQLPEEM  349 (472)
T ss_pred             cccccccHHHHhhcceecccccccceeeccccccceeeeeecccC-CccceeEeeecceeEEeeccccccCcccccceec
Confidence            89999999999999999999999998876553  44555555332 12333332  3443322222222111       1


Q ss_pred             eEeceeec--cCCC-CCceEEEeCCccccceecceeeE-EeeCCeEEEeecCeeeEEEeEecc
Q 037991          417 VMVGYTCR--LATP-ERHKSIVKPEALNSTLINVVHHF-HLRDGFEYVNVNRSMLVINHYKYQ  475 (560)
Q Consensus       417 v~~~ft~r--~~~p-~~~KsIvRp~~v~~~l~~~VH~~-~~~~G~~~~~v~~~~~~I~HY~~r  475 (560)
                      ....|...  ...+ +..|+|.+++++..+   .+|.. ...+|.....+....+.+.||+..
T Consensus       350 ~~~~~~~ts~~~~~~~~~K~i~~~~~v~~~---~~h~~~~~~~~~~~~~~~~~i~~~~~yr~~  409 (472)
T KOG4735|consen  350 EFLKYNETSQPINPSDNLKCIDRDEKVRML---TIHEISKLLPGLPKTDVYTPIVFKCYYRSF  409 (472)
T ss_pred             cceeccCcccccCcccccHHHHHHHHHHHh---cchHHHHHhcCCCcccccHHHHHHHhhhhh
Confidence            11122221  1122 337999999997654   57776 344554334455667888888843

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.82  E-value=7.2e-08  Score=87.61  Aligned_cols=104  Identities=14%  Similarity=0.088  Sum_probs=78.4

Q ss_pred             EEEEEecchHHHHHHHHHHHhhc--CccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCC
Q 037991          283 CICTMLRNQARFIREWVMYHARI--GVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDV  360 (560)
Q Consensus       283 sVc~i~~NEa~~L~EwIe~h~~~--Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~  360 (560)
                      ||++.++|++++|.++|++.+.+  ...+|+|+|++|+|++.++++++.+.+..+.....+...+...+++.++..+  .
T Consensus         1 Svvip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~g~~~~~n~~~~~a--~   78 (169)
T PF00535_consen    1 SVVIPTYNEAEYLERTLESLLKQTDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPENLGFSAARNRGIKHA--K   78 (169)
T ss_dssp             EEEEEESS-TTTHHHHHHHHHHHSGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCCSHHHHHHHHHHHH----
T ss_pred             CEEEEeeCCHHHHHHHHHHHhhccCCCEEEEEecccccccccccccccccccccccccccccccccccccccccccc--c
Confidence            68888999999999999988766  4689999999999999999999976444466666665546666778887775  7


Q ss_pred             CcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          361 CNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       361 ~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                      .+|++++|.|..+.+..-..+.+++++.
T Consensus        79 ~~~i~~ld~D~~~~~~~l~~l~~~~~~~  106 (169)
T PF00535_consen   79 GEYILFLDDDDIISPDWLEELVEALEKN  106 (169)
T ss_dssp             SSEEEEEETTEEE-TTHHHHHHHHHHHC
T ss_pred             eeEEEEeCCCceEcHHHHHHHHHHHHhC
Confidence            7799999999999986334555666553

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=98.64  E-value=4.6e-07  Score=86.92  Aligned_cols=100  Identities=17%  Similarity=0.143  Sum_probs=73.2

Q ss_pred             EEEEEecchHHHHHHHHHHHhhcC--ccEEEEEECCCCcCHHHHHHHhccCC-ceEEEEeCCCcchHHHHHHHHHHHccC
Q 037991          283 CICTMLRNQARFIREWVMYHARIG--VQRWFIYDNNSNDNIESVIDSLSSEK-FNITRHVWPWIKTQEAGFAHCALRARD  359 (560)
Q Consensus       283 sVc~i~~NEa~~L~EwIe~h~~~G--vd~f~IyDn~StD~T~eIL~~y~~~G-~~Vt~~~wp~~~~Q~~a~ndCl~r~~~  359 (560)
                      +|++.+||+++.|.++|++...+-  --+++|+|++|+|+|.++++.+.+.. ..+..+.-+...+...+++.++..  .
T Consensus         1 sIvIp~yn~~~~l~~~l~sl~~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~n~g~~~--~   78 (214)
T cd04196           1 AVLMATYNGEKYLREQLDSILAQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNLGVARNFESLLQA--A   78 (214)
T ss_pred             CEEEEecCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCccHHHHHHHHHHh--C
Confidence            477789999999999999876553  24899999999999999999997653 123334334344444556666555  4


Q ss_pred             CCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          360 VCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       360 ~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      +++||+++|.|..+.|.   .|..+++.
T Consensus        79 ~g~~v~~ld~Dd~~~~~---~l~~~~~~  103 (214)
T cd04196          79 DGDYVFFCDQDDIWLPD---KLERLLKA  103 (214)
T ss_pred             CCCEEEEECCCcccChh---HHHHHHHH
Confidence            89999999999998764   34444444

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=98.60  E-value=3.8e-07  Score=82.79  Aligned_cols=97  Identities=12%  Similarity=0.096  Sum_probs=74.7

Q ss_pred             CceEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHH
Q 037991          279 DHEMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALR  356 (560)
Q Consensus       279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r  356 (560)
                      .+.++|++.++|+++.|.++|++...+..  .+++|+|++|+|+|.++++.+......+.....+...++..+++.++..
T Consensus         2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   81 (291)
T COG0463           2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKDFEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERNGGLGAARNAGLEY   81 (291)
T ss_pred             CccEEEEEeccchhhhHHHHHHHHHhhhhcceEEEEEeCCCCCChHHHHHHHhhhcceEEEeecccCCChHHHHHhhHHh
Confidence            35799999999999999999999876653  2699999999999999999996542123333334445566667777776


Q ss_pred             ccCCCcEEEEecCCceeecCCc
Q 037991          357 ARDVCNWVGFIDVDEFFRLPSG  378 (560)
Q Consensus       357 ~~~~~dWVlflDaDEfL~p~~~  378 (560)
                      .  ..+|++++|+|+. .+...
T Consensus        82 ~--~~~~~~~~d~d~~-~~~~~  100 (291)
T COG0463          82 A--RGDYIVFLDADDQ-HPPEL  100 (291)
T ss_pred             c--cCCEEEEEccCCC-CCHHH
Confidence            5  4499999999999 77543

>PRK10073 putative glycosyl transferase; Provisional

Probab=98.59  E-value=3.9e-07  Score=95.91  Aligned_cols=103  Identities=14%  Similarity=0.063  Sum_probs=78.5

Q ss_pred             ceEEEEEEecchHHHHHHHHHHHhhcC--ccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHc
Q 037991          280 HEMCICTMLRNQARFIREWVMYHARIG--VQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRA  357 (560)
Q Consensus       280 ~~lsVc~i~~NEa~~L~EwIe~h~~~G--vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~  357 (560)
                      ..+||++.+||++++|.++|++...+-  --+++|+|+||+|+|.+++++|.+....+....-+ ..++..+.|.++..+
T Consensus         6 p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~~~-n~G~~~arN~gl~~a   84 (328)
T PRK10073          6 PKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQA-NAGVSVARNTGLAVA   84 (328)
T ss_pred             CeEEEEEeccCCHHHHHHHHHHHHhCCCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEECC-CCChHHHHHHHHHhC
Confidence            369999999999999999999987653  24899999999999999999997654345444323 445666778777764


Q ss_pred             cCCCcEEEEecCCceeecCCcchHHHHH
Q 037991          358 RDVCNWVGFIDVDEFFRLPSGLILHDLI  385 (560)
Q Consensus       358 ~~~~dWVlflDaDEfL~p~~~~sI~d~L  385 (560)
                        .++||+|+|+|..+.|..-..+.+.+
T Consensus        85 --~g~yi~flD~DD~~~p~~l~~l~~~~  110 (328)
T PRK10073         85 --TGKYVAFPDADDVVYPTMYETLMTMA  110 (328)
T ss_pred             --CCCEEEEECCCCccChhHHHHHHHHH
Confidence              88999999999999874333344433

>PRK10063 putative glycosyl transferase; Provisional

Probab=98.57  E-value=5.8e-07  Score=90.84  Aligned_cols=93  Identities=15%  Similarity=0.176  Sum_probs=70.2

Q ss_pred             ceEEEEEEecchHHHHHHHHHHHhhc----Cc-cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHH
Q 037991          280 HEMCICTMLRNQARFIREWVMYHARI----GV-QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCA  354 (560)
Q Consensus       280 ~~lsVc~i~~NEa~~L~EwIe~h~~~----Gv-d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl  354 (560)
                      +.+||++.++|+++.|+++|++...+    +. -+++|+|++|+|+|.++++++.+.. .+....-+ ..+...+.|..+
T Consensus         1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~-~i~~i~~~-~~G~~~A~N~Gi   78 (248)
T PRK10063          1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIF-NLRFVSEP-DNGIYDAMNKGI   78 (248)
T ss_pred             CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccC-CEEEEECC-CCCHHHHHHHHH
Confidence            36899999999999999999987532    22 4899999999999999999986431 23333223 224555677777


Q ss_pred             HHccCCCcEEEEecCCceeecC
Q 037991          355 LRARDVCNWVGFIDVDEFFRLP  376 (560)
Q Consensus       355 ~r~~~~~dWVlflDaDEfL~p~  376 (560)
                      ..+  ..+||+++|+|+++.|.
T Consensus        79 ~~a--~g~~v~~ld~DD~~~~~   98 (248)
T PRK10063         79 AMA--QGRFALFLNSGDIFHQD   98 (248)
T ss_pred             HHc--CCCEEEEEeCCcccCcC
Confidence            664  78999999999999874

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=98.56  E-value=2.1e-06  Score=85.20  Aligned_cols=116  Identities=14%  Similarity=0.121  Sum_probs=81.0

Q ss_pred             CCCceEEEEEEecchHHHHHHHHHHHhhcCc----cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHH
Q 037991          277 EKDHEMCICTMLRNQARFIREWVMYHARIGV----QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAH  352 (560)
Q Consensus       277 ~~~~~lsVc~i~~NEa~~L~EwIe~h~~~Gv----d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~nd  352 (560)
                      +....++|++.++||+..|.++|++...+-.    -+++|+|++|+|+|.++++++.+.+  +....-+...+...+.|.
T Consensus        26 ~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~--v~~i~~~~~~g~~~a~n~  103 (251)
T cd06439          26 AYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADKG--VKLLRFPERRGKAAALNR  103 (251)
T ss_pred             CCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhCc--EEEEEcCCCCChHHHHHH
Confidence            4456799999999999999999998765432    3799999999999999999996542  333322322333445667


Q ss_pred             HHHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEE
Q 037991          353 CALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRIS  400 (560)
Q Consensus       353 Cl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~  400 (560)
                      ++..+  ..|||+++|+|.++.+   +-+..+++.... +.++.+.-.
T Consensus       104 gi~~a--~~d~i~~lD~D~~~~~---~~l~~l~~~~~~-~~~~~v~~~  145 (251)
T cd06439         104 ALALA--TGEIVVFTDANALLDP---DALRLLVRHFAD-PSVGAVSGE  145 (251)
T ss_pred             HHHHc--CCCEEEEEccccCcCH---HHHHHHHHHhcC-CCccEEEeE
Confidence            76665  5699999999999974   335555555543 245554433

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>PRK11204 N-glycosyltransferase; Provisional

Probab=98.51  E-value=1.4e-06  Score=94.11  Aligned_cols=115  Identities=11%  Similarity=0.078  Sum_probs=84.0

Q ss_pred             CceEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHH
Q 037991          279 DHEMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALR  356 (560)
Q Consensus       279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r  356 (560)
                      ...++|++.++||++.|.++|++...+..  .+++|+|++|+|+|.++++++.+...++.....+...+-..+.|.++..
T Consensus        53 ~p~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~Gka~aln~g~~~  132 (420)
T PRK11204         53 YPGVSILVPCYNEGENVEETISHLLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAENQGKANALNTGAAA  132 (420)
T ss_pred             CCCEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCCCCHHHHHHHHHHH
Confidence            34689999999999999999998765542  4899999999999999999886654335544433333445567777666


Q ss_pred             ccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEE
Q 037991          357 ARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELR  398 (560)
Q Consensus       357 ~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~  398 (560)
                        ..+||++++|+|..+.+   +.|.++++....+++++.+.
T Consensus       133 --a~~d~i~~lDaD~~~~~---d~L~~l~~~~~~~~~v~~v~  169 (420)
T PRK11204        133 --ARSEYLVCIDGDALLDP---DAAAYMVEHFLHNPRVGAVT  169 (420)
T ss_pred             --cCCCEEEEECCCCCCCh---hHHHHHHHHHHhCCCeEEEE
Confidence              47899999999998765   34555555553345677664

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=98.51  E-value=1.9e-06  Score=81.32  Aligned_cols=93  Identities=17%  Similarity=0.099  Sum_probs=68.5

Q ss_pred             EEEEEecchHHHHHHHHHHHhhcCcc--EEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCC
Q 037991          283 CICTMLRNQARFIREWVMYHARIGVQ--RWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDV  360 (560)
Q Consensus       283 sVc~i~~NEa~~L~EwIe~h~~~Gvd--~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~  360 (560)
                      +|++.++|+++.|.++|+....+...  +++|+|++|+|++.++++++.+..  +.... ....+-..+.|.++..+  .
T Consensus         1 sivi~~~n~~~~l~~~l~sl~~q~~~~~evivvDd~s~d~~~~~~~~~~~~~--~~~~~-~~~~g~~~a~n~~~~~a--~   75 (202)
T cd06433           1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDIIKKYEDKI--TYWIS-EPDKGIYDAMNKGIALA--T   75 (202)
T ss_pred             CEEEeccchHHHHHHHHHHHHhCCCCCceEEEEeCCCCccHHHHHHHhHhhc--EEEEe-cCCcCHHHHHHHHHHHc--C
Confidence            46778999999999999988766554  799999999999999999986531  22221 22223344566666654  7


Q ss_pred             CcEEEEecCCceeecCCcch
Q 037991          361 CNWVGFIDVDEFFRLPSGLI  380 (560)
Q Consensus       361 ~dWVlflDaDEfL~p~~~~s  380 (560)
                      ++||+++|.|.++.+..-..
T Consensus        76 ~~~v~~ld~D~~~~~~~~~~   95 (202)
T cd06433          76 GDIIGFLNSDDTLLPGALLA   95 (202)
T ss_pred             CCEEEEeCCCcccCchHHHH
Confidence            89999999999998754333

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=98.50  E-value=1.5e-06  Score=86.54  Aligned_cols=113  Identities=11%  Similarity=0.059  Sum_probs=78.6

Q ss_pred             eEEEEEEecchHHHHHHHHHHHhhcCcc----EEEEEECCCCcCHHHHHHHhccC-CceEEEEeCCCcchHHHHHHHHHH
Q 037991          281 EMCICTMLRNQARFIREWVMYHARIGVQ----RWFIYDNNSNDNIESVIDSLSSE-KFNITRHVWPWIKTQEAGFAHCAL  355 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L~EwIe~h~~~Gvd----~f~IyDn~StD~T~eIL~~y~~~-G~~Vt~~~wp~~~~Q~~a~ndCl~  355 (560)
                      .++|++-++||++.|.++|++...+-..    +|+|+|++|+|+|.++++++... ...+....-....++..+.|.++.
T Consensus         2 ~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~~G~~~a~n~g~~   81 (241)
T cd06427           2 VYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQPRTKPKACNYALA   81 (241)
T ss_pred             eEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCCCCchHHHHHHHHH
Confidence            5899999999999999999997765332    68899999999999999998532 122333322233455667787777


Q ss_pred             HccCCCcEEEEecCCceeecCCcchHHHHHHhcCC-CCCEeEEE
Q 037991          356 RARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSG-DGSVAELR  398 (560)
Q Consensus       356 r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~-~~~v~ai~  398 (560)
                      .+  .++||+++|+|-.+.+.   .|..+++.+.. +++++.+.
T Consensus        82 ~a--~gd~i~~~DaD~~~~~~---~l~~~~~~~~~~~~~v~~~~  120 (241)
T cd06427          82 FA--RGEYVVIYDAEDAPDPD---QLKKAVAAFARLDDKLACVQ  120 (241)
T ss_pred             hc--CCCEEEEEcCCCCCChH---HHHHHHHHHHhcCCCEEEEe
Confidence            64  78999999999998764   34444444322 13455443

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=98.50  E-value=9.8e-07  Score=88.08  Aligned_cols=107  Identities=18%  Similarity=0.109  Sum_probs=74.9

Q ss_pred             CCCceEEEEEEecchHHHHHHHHHHHhhc----CccEEEEEECCCCcCHHHHHHHhccC-C-ceEEEEeCCCcchHHHHH
Q 037991          277 EKDHEMCICTMLRNQARFIREWVMYHARI----GVQRWFIYDNNSNDNIESVIDSLSSE-K-FNITRHVWPWIKTQEAGF  350 (560)
Q Consensus       277 ~~~~~lsVc~i~~NEa~~L~EwIe~h~~~----Gvd~f~IyDn~StD~T~eIL~~y~~~-G-~~Vt~~~wp~~~~Q~~a~  350 (560)
                      +....++|++.++||+..|.++++.....    .--+|+|+|++|+|+|.++++++.+. + ..+....-+...+...++
T Consensus         6 ~~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~G~~~a~   85 (243)
T PLN02726          6 EGAMKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLGLGTAY   85 (243)
T ss_pred             CCCceEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCCCHHHHH
Confidence            34567999999999999998887754321    12389999999999999999988543 1 124444434333444567


Q ss_pred             HHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          351 AHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       351 ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                      +.++..+  .++|++++|+|..+.|.   .|.++++..
T Consensus        86 n~g~~~a--~g~~i~~lD~D~~~~~~---~l~~l~~~~  118 (243)
T PLN02726         86 IHGLKHA--SGDFVVIMDADLSHHPK---YLPSFIKKQ  118 (243)
T ss_pred             HHHHHHc--CCCEEEEEcCCCCCCHH---HHHHHHHHH
Confidence            7776664  78999999999986553   355555443

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111

Probab=98.47  E-value=1.6e-06  Score=94.81  Aligned_cols=114  Identities=9%  Similarity=0.081  Sum_probs=80.8

Q ss_pred             CceEEEEEEecchHHHHHHHHHHHhhcCc--c--EEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHH
Q 037991          279 DHEMCICTMLRNQARFIREWVMYHARIGV--Q--RWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCA  354 (560)
Q Consensus       279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d--~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl  354 (560)
                      ...++|++-++||++.|.++|+....+-.  +  +|+|+|++|+|+|.++++++.+....+....-+..++...+.|.++
T Consensus        48 ~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~~~~~~Gka~AlN~gl  127 (439)
T TIGR03111        48 LPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMNSDQGKAKALNAAI  127 (439)
T ss_pred             CCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEEeCCCCCHHHHHHHHH
Confidence            34689999999999999999998765432  2  6999999999999999988766433333322223345556778877


Q ss_pred             HHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEE
Q 037991          355 LRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAEL  397 (560)
Q Consensus       355 ~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai  397 (560)
                      ..+  .++||+++|+|..+.+   +.+.++++.+..+++++++
T Consensus       128 ~~s--~g~~v~~~DaD~~~~~---d~L~~l~~~f~~~~~v~~v  165 (439)
T TIGR03111       128 YNS--IGKYIIHIDSDGKLHK---DAIKNMVTRFENNPDIHAM  165 (439)
T ss_pred             HHc--cCCEEEEECCCCCcCh---HHHHHHHHHHHhCCCeEEE
Confidence            764  7899999999999865   3455555554433445543

Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=98.43  E-value=3.3e-06  Score=80.74  Aligned_cols=108  Identities=7%  Similarity=0.108  Sum_probs=73.8

Q ss_pred             EEEEEecchH--HHHHHHHHHHhhcC--ccEEEEEECCC-CcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHc
Q 037991          283 CICTMLRNQA--RFIREWVMYHARIG--VQRWFIYDNNS-NDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRA  357 (560)
Q Consensus       283 sVc~i~~NEa--~~L~EwIe~h~~~G--vd~f~IyDn~S-tD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~  357 (560)
                      +|++.++|++  .+|.++|++...+-  ..+++|+|++| +|+|.++++.|.+..- +....-+...+-..+.|.++..+
T Consensus         1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n~G~~~a~N~g~~~a   79 (201)
T cd04195           1 SVLMSVYIKEKPEFLREALESILKQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKNRGLGKALNEGLKHC   79 (201)
T ss_pred             CEEEEccccchHHHHHHHHHHHHhcCCCCcEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCccccHHHHHHHHHHhc
Confidence            4566778876  59999999987654  36888898887 8899999999865332 44333333334455678887764


Q ss_pred             cCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeE
Q 037991          358 RDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAE  396 (560)
Q Consensus       358 ~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~a  396 (560)
                        .++|++++|+|..+.|.   .|..+++.+..++.++.
T Consensus        80 --~gd~i~~lD~Dd~~~~~---~l~~~~~~~~~~~~~~~  113 (201)
T cd04195          80 --TYDWVARMDTDDISLPD---RFEKQLDFIEKNPEIDI  113 (201)
T ss_pred             --CCCEEEEeCCccccCcH---HHHHHHHHHHhCCCeEE
Confidence              79999999999988764   34444444332233443

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=98.43  E-value=4.4e-06  Score=81.53  Aligned_cols=113  Identities=13%  Similarity=0.191  Sum_probs=77.8

Q ss_pred             eEEEEEEecchH-HHHHHHHHHHhhcCc-c---EEEEEECCCCcCHHHHHHHhccCCceEEEEeCC-CcchHHHHHHHHH
Q 037991          281 EMCICTMLRNQA-RFIREWVMYHARIGV-Q---RWFIYDNNSNDNIESVIDSLSSEKFNITRHVWP-WIKTQEAGFAHCA  354 (560)
Q Consensus       281 ~lsVc~i~~NEa-~~L~EwIe~h~~~Gv-d---~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp-~~~~Q~~a~ndCl  354 (560)
                      .++|++.++||+ ..|.++|++...+-. +   +++|+|++|+|+|.++++.+...- .+....-+ ..+....++|.++
T Consensus         2 ~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~n~~~   80 (234)
T cd06421           2 TVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEY-GYRYLTRPDNRHAKAGNLNNAL   80 (234)
T ss_pred             ceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhccc-CceEEEeCCCCCCcHHHHHHHH
Confidence            488998899985 689999998876544 2   799999999999999999985421 12222112 1223334567777


Q ss_pred             HHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEE
Q 037991          355 LRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRI  399 (560)
Q Consensus       355 ~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~  399 (560)
                      ..+  .++|++++|+|.++.|.   .|..+++....++.++.+.-
T Consensus        81 ~~a--~~d~i~~lD~D~~~~~~---~l~~l~~~~~~~~~~~~v~~  120 (234)
T cd06421          81 AHT--TGDFVAILDADHVPTPD---FLRRTLGYFLDDPKVALVQT  120 (234)
T ss_pred             HhC--CCCEEEEEccccCcCcc---HHHHHHHHHhcCCCeEEEec
Confidence            654  89999999999999763   45555555544345665543

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=98.40  E-value=2.4e-06  Score=91.65  Aligned_cols=107  Identities=16%  Similarity=0.070  Sum_probs=74.7

Q ss_pred             CceEEEEEEecchHHHHHHHHHHHhhcCc---cEEEEEECCCCcCHHHHHHHhccCCc---eEEEEeC---C-CcchHHH
Q 037991          279 DHEMCICTMLRNQARFIREWVMYHARIGV---QRWFIYDNNSNDNIESVIDSLSSEKF---NITRHVW---P-WIKTQEA  348 (560)
Q Consensus       279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~Gv---d~f~IyDn~StD~T~eIL~~y~~~G~---~Vt~~~w---p-~~~~Q~~  348 (560)
                      ...+||++.++||++.|.++|++...+-.   -+|+|+|++|+|+|.++++++.+...   ++....-   | +..+...
T Consensus        39 ~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~~  118 (384)
T TIGR03469        39 WPAVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWSGKLW  118 (384)
T ss_pred             CCCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcchHH
Confidence            34699999999999999999998766532   48999999999999999998864211   2333221   1 3334444


Q ss_pred             HHHHHHHHcc---CCCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          349 GFAHCALRAR---DVCNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       349 a~ndCl~r~~---~~~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                      +.|..+..++   ..+||++++|+|-.+.|.   .|.++++..
T Consensus       119 A~n~g~~~A~~~~~~gd~llflDaD~~~~p~---~l~~lv~~~  158 (384)
T TIGR03469       119 AVSQGIAAARTLAPPADYLLLTDADIAHGPD---NLARLVARA  158 (384)
T ss_pred             HHHHHHHHHhccCCCCCEEEEECCCCCCChh---HHHHHHHHH
Confidence            5566655542   128999999999987653   355555444

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional

Probab=98.40  E-value=2.3e-06  Score=90.30  Aligned_cols=109  Identities=13%  Similarity=0.090  Sum_probs=78.3

Q ss_pred             CCCceEEEEEEecchHHHHHHHHHHHhh----------cCccEEEEEECCCCcCHHHHHHHhccCC----ceEEEEeCCC
Q 037991          277 EKDHEMCICTMLRNQARFIREWVMYHAR----------IGVQRWFIYDNNSNDNIESVIDSLSSEK----FNITRHVWPW  342 (560)
Q Consensus       277 ~~~~~lsVc~i~~NEa~~L~EwIe~h~~----------~Gvd~f~IyDn~StD~T~eIL~~y~~~G----~~Vt~~~wp~  342 (560)
                      .....++|++.++||++.|.++|+....          .+-.+|+|+|+||+|+|.++++++.+..    ..+....-+.
T Consensus        67 ~~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~  146 (333)
T PTZ00260         67 DSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLR  146 (333)
T ss_pred             CCCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCC
Confidence            4566899999999999999998886432          1246899999999999999999986531    1233333344


Q ss_pred             cchHHHHHHHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          343 IKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       343 ~~~Q~~a~ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      ..++..+++..+..+  ..+||+++|+|....+..-..+.+.+.+
T Consensus       147 N~G~~~A~~~Gi~~a--~gd~I~~~DaD~~~~~~~l~~l~~~l~~  189 (333)
T PTZ00260        147 NKGKGGAVRIGMLAS--RGKYILMVDADGATDIDDFDKLEDIMLK  189 (333)
T ss_pred             CCChHHHHHHHHHHc--cCCEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            445556666666554  7899999999998877544445555544

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=98.40  E-value=1.4e-06  Score=84.61  Aligned_cols=99  Identities=16%  Similarity=0.105  Sum_probs=73.4

Q ss_pred             EEEEecchHHHHHHHHHHHhhc---CccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCC
Q 037991          284 ICTMLRNQARFIREWVMYHARI---GVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDV  360 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~---Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~  360 (560)
                      |++.++||++.|..+|+....+   ...+|+|+|++|+|+|.++++++.+....+.....+...+...+.|.++..+  .
T Consensus         1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n~G~~~a~n~g~~~a--~   78 (224)
T cd06442           1 IIIPTYNERENIPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGKRGLGSAYIEGFKAA--R   78 (224)
T ss_pred             CeEeccchhhhHHHHHHHHHHhhcCCCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCCCChHHHHHHHHHHc--C
Confidence            3556899999999999876643   3468999999999999999999866544444444555555566778887775  6


Q ss_pred             CcEEEEecCCceeecCCcchHHHHHHh
Q 037991          361 CNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       361 ~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      .+||+++|.|..+.+.   -|..+++.
T Consensus        79 gd~i~~lD~D~~~~~~---~l~~l~~~  102 (224)
T cd06442          79 GDVIVVMDADLSHPPE---YIPELLEA  102 (224)
T ss_pred             CCEEEEEECCCCCCHH---HHHHHHHH
Confidence            7999999999887653   24444443

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=98.39  E-value=4.7e-06  Score=81.61  Aligned_cols=110  Identities=11%  Similarity=0.095  Sum_probs=81.0

Q ss_pred             EEEEEEecchH-HHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCC
Q 037991          282 MCICTMLRNQA-RFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDV  360 (560)
Q Consensus       282 lsVc~i~~NEa-~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~  360 (560)
                      ++|++.++||+ +.|.++|+....+...+|+|+|++|+|++.+++.+..+... +.... ....+...+.|.++..+  .
T Consensus         2 isVvIp~~ne~~~~l~~~l~sl~~q~~~eiivvdd~s~d~~~~~l~~~~~~~~-~~v~~-~~~~g~~~a~n~g~~~a--~   77 (235)
T cd06434           2 VTVIIPVYDEDPDVFRECLRSILRQKPLEIIVVTDGDDEPYLSILSQTVKYGG-IFVIT-VPHPGKRRALAEGIRHV--T   77 (235)
T ss_pred             eEEEEeecCCChHHHHHHHHHHHhCCCCEEEEEeCCCChHHHHHHHhhccCCc-EEEEe-cCCCChHHHHHHHHHHh--C
Confidence            68888899999 99999999987766779999999999999998755443332 32222 22334556777777664  8


Q ss_pred             CcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEE
Q 037991          361 CNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRI  399 (560)
Q Consensus       361 ~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~  399 (560)
                      ++||+++|+|..+.+.   .|..+++.+. ++.++.+.-
T Consensus        78 ~d~v~~lD~D~~~~~~---~l~~l~~~~~-~~~v~~v~~  112 (235)
T cd06434          78 TDIVVLLDSDTVWPPN---ALPEMLKPFE-DPKVGGVGT  112 (235)
T ss_pred             CCEEEEECCCceeChh---HHHHHHHhcc-CCCEeEEcC
Confidence            9999999999999864   3666666654 346776643

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

Probab=98.39  E-value=5.1e-06  Score=81.85  Aligned_cols=114  Identities=11%  Similarity=0.064  Sum_probs=74.7

Q ss_pred             eEEEEEEecchHHHHHHHHHHHhhcCc----cEEEEEECCCCcCHHHHHHHhcc----CCceEEEEeCCC-cchHHHHHH
Q 037991          281 EMCICTMLRNQARFIREWVMYHARIGV----QRWFIYDNNSNDNIESVIDSLSS----EKFNITRHVWPW-IKTQEAGFA  351 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L~EwIe~h~~~Gv----d~f~IyDn~StD~T~eIL~~y~~----~G~~Vt~~~wp~-~~~Q~~a~n  351 (560)
                      .++|++.++||++.|.++|++...+-.    -+|+|.|+ |+|+|.++++++.+    .+..+....... .+....+.|
T Consensus         2 ~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~a~n   80 (232)
T cd06437           2 MVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVEEYAAQGVNIKHVRRADRTGYKAGALA   80 (232)
T ss_pred             ceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHHHHhhcCCceEEEECCCCCCCchHHHH
Confidence            489999999999999999998765422    26778886 99999999887642    243344333221 222223456


Q ss_pred             HHHHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEe
Q 037991          352 HCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISC  401 (560)
Q Consensus       352 dCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~  401 (560)
                      ..+..  ..++||+++|+|-.+.|.   .|..+..... ++.++.+.-.+
T Consensus        81 ~g~~~--a~~~~i~~~DaD~~~~~~---~l~~~~~~~~-~~~v~~v~~~~  124 (232)
T cd06437          81 EGMKV--AKGEYVAIFDADFVPPPD---FLQKTPPYFA-DPKLGFVQTRW  124 (232)
T ss_pred             HHHHh--CCCCEEEEEcCCCCCChH---HHHHhhhhhc-CCCeEEEecce
Confidence            55555  489999999999998653   3444333322 34566655433

Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=98.38  E-value=4.6e-06  Score=91.20  Aligned_cols=115  Identities=14%  Similarity=0.068  Sum_probs=81.3

Q ss_pred             ceEEEEEEecchHHHHHHHHHHHhhcC--ccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHc
Q 037991          280 HEMCICTMLRNQARFIREWVMYHARIG--VQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRA  357 (560)
Q Consensus       280 ~~lsVc~i~~NEa~~L~EwIe~h~~~G--vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~  357 (560)
                      ..++|.+-++||+..|.++|++...+.  -.+|+|+|++|+|+|.++++++.+....+....-+...+...+.|.++.. 
T Consensus        75 p~vsViIP~yNE~~~i~~~l~sll~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n~Gka~AlN~gl~~-  153 (444)
T PRK14583         75 PLVSILVPCFNEGLNARETIHAALAQTYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHNQGKAIALRMGAAA-  153 (444)
T ss_pred             CcEEEEEEeCCCHHHHHHHHHHHHcCCCCCeEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCCCCHHHHHHHHHHh-
Confidence            468999999999999999999866543  24899999999999999999886543234333322233444566776665 


Q ss_pred             cCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEE
Q 037991          358 RDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRI  399 (560)
Q Consensus       358 ~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~  399 (560)
                       .++||++++|+|..+.+.   .+..+++....+++++++.-
T Consensus       154 -a~~d~iv~lDAD~~~~~d---~L~~lv~~~~~~~~~g~v~g  191 (444)
T PRK14583        154 -ARSEYLVCIDGDALLDKN---AVPYLVAPLIANPRTGAVTG  191 (444)
T ss_pred             -CCCCEEEEECCCCCcCHH---HHHHHHHHHHhCCCeEEEEc
Confidence             489999999999987653   45555554433346776653

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional

Probab=98.36  E-value=2.7e-06  Score=89.47  Aligned_cols=104  Identities=12%  Similarity=0.099  Sum_probs=73.4

Q ss_pred             ceEEEEEEecchHHHHHHHHHHHhh----cC-ccEEEEEECCCCcCHHHHHHHhccC-CceEEEEeCCCcchHHHHHHHH
Q 037991          280 HEMCICTMLRNQARFIREWVMYHAR----IG-VQRWFIYDNNSNDNIESVIDSLSSE-KFNITRHVWPWIKTQEAGFAHC  353 (560)
Q Consensus       280 ~~lsVc~i~~NEa~~L~EwIe~h~~----~G-vd~f~IyDn~StD~T~eIL~~y~~~-G~~Vt~~~wp~~~~Q~~a~ndC  353 (560)
                      ..++|++-++||++.|.++++....    .+ --+|+|+|+||+|+|.++++++.+. +..+.........++..+++..
T Consensus         6 ~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n~G~~~A~~~G   85 (325)
T PRK10714          6 KKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRNYGQHSAIMAG   85 (325)
T ss_pred             CeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCCCCHHHHHHHH
Confidence            4699999999999999998875421    12 2489999999999999999988643 4444433333333444566655


Q ss_pred             HHHccCCCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          354 ALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       354 l~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                      +..  ..+||++++|+|....|..   |.++++..
T Consensus        86 ~~~--A~gd~vv~~DaD~q~~p~~---i~~l~~~~  115 (325)
T PRK10714         86 FSH--VTGDLIITLDADLQNPPEE---IPRLVAKA  115 (325)
T ss_pred             HHh--CCCCEEEEECCCCCCCHHH---HHHHHHHH
Confidence            555  4789999999999977653   44444443

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation

Probab=98.35  E-value=1.7e-06  Score=83.94  Aligned_cols=99  Identities=15%  Similarity=0.102  Sum_probs=69.6

Q ss_pred             EEEEecchHHHHHHHHHHHhhc------CccEEEEEECCCCcCHHHHHHHhccC-CceEEEEeCCCcchHHHHHHHHHHH
Q 037991          284 ICTMLRNQARFIREWVMYHARI------GVQRWFIYDNNSNDNIESVIDSLSSE-KFNITRHVWPWIKTQEAGFAHCALR  356 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~------Gvd~f~IyDn~StD~T~eIL~~y~~~-G~~Vt~~~wp~~~~Q~~a~ndCl~r  356 (560)
                      |++.++||++.|.++|+....+      ...+++|+|++|+|+|.++++++.+. +..+....-+...+...+++.++..
T Consensus         1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~~~   80 (211)
T cd04188           1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKNRGKGGAVRAGMLA   80 (211)
T ss_pred             CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHHHH
Confidence            3567899999999999987644      34689999999999999999998643 2212333323223344566666665


Q ss_pred             ccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          357 ARDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       357 ~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      +  ..+||+++|+|..+.+..   |..+++.
T Consensus        81 a--~gd~i~~ld~D~~~~~~~---l~~l~~~  106 (211)
T cd04188          81 A--RGDYILFADADLATPFEE---LEKLEEA  106 (211)
T ss_pred             h--cCCEEEEEeCCCCCCHHH---HHHHHHH
Confidence            4  679999999999877643   4444444

UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=98.33  E-value=1e-05  Score=73.28  Aligned_cols=108  Identities=12%  Similarity=0.068  Sum_probs=71.9

Q ss_pred             EEEecchHHHHHHHHHHHhhcC--ccEEEEEECCCCcCHHHHHHHhccCC-ceEEEEeCCCcchHHHHHHHHHHHccCCC
Q 037991          285 CTMLRNQARFIREWVMYHARIG--VQRWFIYDNNSNDNIESVIDSLSSEK-FNITRHVWPWIKTQEAGFAHCALRARDVC  361 (560)
Q Consensus       285 c~i~~NEa~~L~EwIe~h~~~G--vd~f~IyDn~StD~T~eIL~~y~~~G-~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~~  361 (560)
                      ++.++|+++.|.++|+....+.  -.+++|+|++|+|+|.++++++...+ ..+.....+...+...+.|.++..  ..+
T Consensus         2 iip~~n~~~~l~~~l~sl~~q~~~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~--~~~   79 (180)
T cd06423           2 IVPAYNEEAVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKENGGKAGALNAGLRH--AKG   79 (180)
T ss_pred             eecccChHHHHHHHHHHHHhCCCCceEEEEEeCCCccchHHHHHHHhccccceEEEEEecccCCchHHHHHHHHh--cCC
Confidence            4568999999999999987764  56899999999999999999986543 112222222222223344555444  389


Q ss_pred             cEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEE
Q 037991          362 NWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAEL  397 (560)
Q Consensus       362 dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai  397 (560)
                      +|++++|.|..+.+.   .|..++......+.++.+
T Consensus        80 ~~i~~~D~D~~~~~~---~l~~~~~~~~~~~~~~~v  112 (180)
T cd06423          80 DIVVVLDADTILEPD---ALKRLVVPFFADPKVGAV  112 (180)
T ss_pred             CEEEEECCCCCcChH---HHHHHHHHhccCCCeeeE
Confidence            999999999988652   355553443333344443

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=98.31  E-value=4.2e-06  Score=80.29  Aligned_cols=101  Identities=19%  Similarity=0.141  Sum_probs=69.3

Q ss_pred             EEEEecchHHHHHHHHHHHhhcC--ccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHc-cCC
Q 037991          284 ICTMLRNQARFIREWVMYHARIG--VQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRA-RDV  360 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~G--vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~-~~~  360 (560)
                      |++.++|+++.|.++|++...+-  -.+++|+|++|+|+|.++++++.+.. .+.....+...+...+++.++..+ ...
T Consensus         1 viI~~~n~~~~l~~~l~sl~~q~~~~~eiiivD~~s~d~t~~~~~~~~~~~-~i~~~~~~~n~g~~~~~n~~~~~a~~~~   79 (202)
T cd04185           1 AVVVTYNRLDLLKECLDALLAQTRPPDHIIVIDNASTDGTAEWLTSLGDLD-NIVYLRLPENLGGAGGFYEGVRRAYELG   79 (202)
T ss_pred             CEEEeeCCHHHHHHHHHHHHhccCCCceEEEEECCCCcchHHHHHHhcCCC-ceEEEECccccchhhHHHHHHHHHhccC
Confidence            35678999999999999887543  25899999999999999999986432 133333333333333445554433 357


Q ss_pred             CcEEEEecCCceeecCCcchHHHHH
Q 037991          361 CNWVGFIDVDEFFRLPSGLILHDLI  385 (560)
Q Consensus       361 ~dWVlflDaDEfL~p~~~~sI~d~L  385 (560)
                      ++|++++|.|..+.+..-..+.+.+
T Consensus        80 ~d~v~~ld~D~~~~~~~l~~l~~~~  104 (202)
T cd04185          80 YDWIWLMDDDAIPDPDALEKLLAYA  104 (202)
T ss_pred             CCEEEEeCCCCCcChHHHHHHHHHH
Confidence            8999999999998764333343433

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=98.30  E-value=2.4e-06  Score=80.25  Aligned_cols=99  Identities=14%  Similarity=0.019  Sum_probs=72.7

Q ss_pred             EEEEecchHHHHHHHHHHHhhc----CccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccC
Q 037991          284 ICTMLRNQARFIREWVMYHARI----GVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARD  359 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~----Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~  359 (560)
                      |++.++|+++.|.++|++...+    ...+|+|+|++|+|++.++++.+......+.....+...+...+.+..+..+  
T Consensus         1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G~~~a~n~g~~~a--   78 (185)
T cd04179           1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFGKGAAVRAGFKAA--   78 (185)
T ss_pred             CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCCccHHHHHHHHHh--
Confidence            3567899999999999988766    3689999999999999999999865443333343433334445667777775  


Q ss_pred             CCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          360 VCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       360 ~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      ..+|++++|.|..+.|.   -|..++..
T Consensus        79 ~gd~i~~lD~D~~~~~~---~l~~l~~~  103 (185)
T cd04179          79 RGDIVVTMDADLQHPPE---DIPKLLEK  103 (185)
T ss_pred             cCCEEEEEeCCCCCCHH---HHHHHHHH
Confidence            56999999999987653   35555554

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=98.29  E-value=4e-06  Score=81.23  Aligned_cols=100  Identities=13%  Similarity=0.177  Sum_probs=70.8

Q ss_pred             EEEEecchHHHHHHHHHHHhhcC--c--cEEEEEECCCCcCHHHHHH-HhccCCceEEEEeCC--CcchHHHHHHHHHHH
Q 037991          284 ICTMLRNQARFIREWVMYHARIG--V--QRWFIYDNNSNDNIESVID-SLSSEKFNITRHVWP--WIKTQEAGFAHCALR  356 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~G--v--d~f~IyDn~StD~T~eIL~-~y~~~G~~Vt~~~wp--~~~~Q~~a~ndCl~r  356 (560)
                      |++.++||+..|.++|+....+-  .  -+|+|+|++|+|+|.++++ .....+..+.....+  ...+...++|.++.+
T Consensus         1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g~~~   80 (229)
T cd04192           1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSRVSISGKKNALTTAIKA   80 (229)
T ss_pred             CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccCcccchhHHHHHHHHHH
Confidence            35678999999999999876542  2  4899999999999999998 322223335444433  334455577777776


Q ss_pred             ccCCCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          357 ARDVCNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       357 ~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                      +  .++||+++|+|..+.+   +.|..+++.+
T Consensus        81 ~--~~d~i~~~D~D~~~~~---~~l~~l~~~~  107 (229)
T cd04192          81 A--KGDWIVTTDADCVVPS---NWLLTFVAFI  107 (229)
T ss_pred             h--cCCEEEEECCCcccCH---HHHHHHHHHh
Confidence            4  7899999999998865   3455555543

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=98.28  E-value=5.7e-06  Score=81.22  Aligned_cols=101  Identities=16%  Similarity=0.215  Sum_probs=75.0

Q ss_pred             EEEEEEecchHHHHHHHHHHHhhcCc----cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHc
Q 037991          282 MCICTMLRNQARFIREWVMYHARIGV----QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRA  357 (560)
Q Consensus       282 lsVc~i~~NEa~~L~EwIe~h~~~Gv----d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~  357 (560)
                      ++|++.++||++.|.++|+....+..    -+++|+|++|+|+|.++++.+.+....+....-+. .....+.|.++..+
T Consensus         2 ~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~-~~~~~a~N~g~~~a   80 (249)
T cd02525           2 VSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPK-RIQSAGLNIGIRNS   80 (249)
T ss_pred             EEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCC-CCchHHHHHHHHHh
Confidence            78888899999999999998876644    48999999999999999999965433344333332 23345677777765


Q ss_pred             cCCCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          358 RDVCNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       358 ~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                        .++|++++|.|..+.|.   .|..+++..
T Consensus        81 --~~d~v~~lD~D~~~~~~---~l~~~~~~~  106 (249)
T cd02525          81 --RGDIIIRVDAHAVYPKD---YILELVEAL  106 (249)
T ss_pred             --CCCEEEEECCCccCCHH---HHHHHHHHH
Confidence              89999999999987653   355555443

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine

Probab=98.28  E-value=5.1e-06  Score=81.09  Aligned_cols=92  Identities=12%  Similarity=0.153  Sum_probs=66.4

Q ss_pred             EEEEecchHHHHHHHHHHHhhcCc---cEEEEEECCCCcCHHHHHHHhccC----CceEEEEe--CCCcchHHHHHHHHH
Q 037991          284 ICTMLRNQARFIREWVMYHARIGV---QRWFIYDNNSNDNIESVIDSLSSE----KFNITRHV--WPWIKTQEAGFAHCA  354 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~Gv---d~f~IyDn~StD~T~eIL~~y~~~----G~~Vt~~~--wp~~~~Q~~a~ndCl  354 (560)
                      |++.++|++++|.++|++...+-.   -+++|+|++|+|+|.+++++|.+.    ++.+....  .+...+...+.|.++
T Consensus         1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N~g~   80 (219)
T cd06913           1 IILPVHNGEQWLDECLESVLQQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQAI   80 (219)
T ss_pred             CEEeecCcHHHHHHHHHHHHhCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHHHHH
Confidence            356789999999999998865522   389999999999999999997542    22222222  122234445567776


Q ss_pred             HHccCCCcEEEEecCCceeecCC
Q 037991          355 LRARDVCNWVGFIDVDEFFRLPS  377 (560)
Q Consensus       355 ~r~~~~~dWVlflDaDEfL~p~~  377 (560)
                      ..+  .++|++++|+|..+.+..
T Consensus        81 ~~a--~gd~i~~lD~D~~~~~~~  101 (219)
T cd06913          81 AQS--SGRYLCFLDSDDVMMPQR  101 (219)
T ss_pred             Hhc--CCCEEEEECCCccCChhH
Confidence            654  889999999999988743

This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.

>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional

Probab=98.26  E-value=6.9e-06  Score=85.76  Aligned_cols=103  Identities=14%  Similarity=0.115  Sum_probs=70.7

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHHhhc----CccEEEEEECCCCcCHHHHHHHhccCCceEEEEe-----CCCcchHHH
Q 037991          278 KDHEMCICTMLRNQARFIREWVMYHARI----GVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHV-----WPWIKTQEA  348 (560)
Q Consensus       278 ~~~~lsVc~i~~NEa~~L~EwIe~h~~~----Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~-----wp~~~~Q~~  348 (560)
                      ....++|++-++||++.|.++|+....+    ..++|+|+|++|+|+|.++++++   |..+....     -+...+--.
T Consensus        29 ~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~---~~~v~~~~~~~~~~~~n~Gkg~  105 (306)
T PRK13915         29 AGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAA---GARVVSREEILPELPPRPGKGE  105 (306)
T ss_pred             CCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHh---cchhhcchhhhhccccCCCHHH
Confidence            3457999999999999999999977642    35799999999999999999988   43321110     011122223


Q ss_pred             HHHHHHHHccCCCcEEEEecCCce-eecCCcchHHHHHHhc
Q 037991          349 GFAHCALRARDVCNWVGFIDVDEF-FRLPSGLILHDLIRNL  388 (560)
Q Consensus       349 a~ndCl~r~~~~~dWVlflDaDEf-L~p~~~~sI~d~L~~~  388 (560)
                      +.+..+..  ..++||+++|+|-. +.|.   .|..+++.+
T Consensus       106 A~~~g~~~--a~gd~vv~lDaD~~~~~p~---~l~~l~~~l  141 (306)
T PRK13915        106 ALWRSLAA--TTGDIVVFVDADLINFDPM---FVPGLLGPL  141 (306)
T ss_pred             HHHHHHHh--cCCCEEEEEeCccccCCHH---HHHHHHHHH
Confidence            44555544  47899999999997 5543   344555443

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=98.25  E-value=8.7e-06  Score=77.73  Aligned_cols=103  Identities=17%  Similarity=0.143  Sum_probs=71.1

Q ss_pred             eEEEEEEecchH-HHHHHHHHHHhhcCc--cEEEEEECCCCcCH-HHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHH
Q 037991          281 EMCICTMLRNQA-RFIREWVMYHARIGV--QRWFIYDNNSNDNI-ESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALR  356 (560)
Q Consensus       281 ~lsVc~i~~NEa-~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T-~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r  356 (560)
                      .++|++.++||+ +.|.++|++...+-.  .+++|+|++|+|++ .++++.+......+..+.-+...+-..++|.++..
T Consensus         2 ~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~   81 (202)
T cd04184           2 LISIVMPVYNTPEKYLREAIESVRAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREENGGISAATNSALEL   81 (202)
T ss_pred             eEEEEEecccCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccCCCHHHHHHHHHHh
Confidence            489999999999 999999998765432  38999999999974 56777765443334433333322333456776666


Q ss_pred             ccCCCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          357 ARDVCNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       357 ~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                      +  .++|++++|.|..+.+.   .|..+++..
T Consensus        82 a--~~d~i~~ld~D~~~~~~---~l~~~~~~~  108 (202)
T cd04184          82 A--TGEFVALLDHDDELAPH---ALYEVVKAL  108 (202)
T ss_pred             h--cCCEEEEECCCCcCChH---HHHHHHHHH
Confidence            4  78999999999988653   344444443

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis

Probab=98.25  E-value=6.4e-06  Score=78.30  Aligned_cols=99  Identities=16%  Similarity=0.098  Sum_probs=67.4

Q ss_pred             EEEEecchHHHHHHHHHHHhhcCc----cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHc--
Q 037991          284 ICTMLRNQARFIREWVMYHARIGV----QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRA--  357 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~Gv----d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~--  357 (560)
                      |++.++||+..|.++|+....+..    -+|+|+|++|+|+|.++++.+   +..+....-+....+..+.|..+..+  
T Consensus         1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~~---~~~~~~~~~~~~~gk~~aln~g~~~a~~   77 (183)
T cd06438           1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARAA---GATVLERHDPERRGKGYALDFGFRHLLN   77 (183)
T ss_pred             CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHHc---CCeEEEeCCCCCCCHHHHHHHHHHHHHh
Confidence            356689999999999998765533    468999999999999999987   33333222122223444555544433  


Q ss_pred             -cCCCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          358 -RDVCNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       358 -~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                       ...++|++++|+|-.+.|.   .|..+++.+
T Consensus        78 ~~~~~d~v~~~DaD~~~~p~---~l~~l~~~~  106 (183)
T cd06438          78 LADDPDAVVVFDADNLVDPN---ALEELNARF  106 (183)
T ss_pred             cCCCCCEEEEEcCCCCCChh---HHHHHHHHH
Confidence             2469999999999999764   344444443

The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=98.23  E-value=8.5e-06  Score=83.96  Aligned_cols=102  Identities=11%  Similarity=-0.076  Sum_probs=70.7

Q ss_pred             EEEEEecchH-HHHHHHHHHHhhcC----ccEEEEEECCCCcCHHHHHHHh--ccCCceEEEEeCCCcchHHHHHHHHHH
Q 037991          283 CICTMLRNQA-RFIREWVMYHARIG----VQRWFIYDNNSNDNIESVIDSL--SSEKFNITRHVWPWIKTQEAGFAHCAL  355 (560)
Q Consensus       283 sVc~i~~NEa-~~L~EwIe~h~~~G----vd~f~IyDn~StD~T~eIL~~y--~~~G~~Vt~~~wp~~~~Q~~a~ndCl~  355 (560)
                      ||++.++||+ +.|.++|++...+-    ..+|+|+||+|+|+|.+++.++  .+....|....-+...+...+.|.++.
T Consensus         1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~   80 (299)
T cd02510           1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGAR   80 (299)
T ss_pred             CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHHH
Confidence            5778899999 99999999876432    1399999999999999988652  111223554444444445556677777


Q ss_pred             HccCCCcEEEEecCCceeecCCcchHHHHHH
Q 037991          356 RARDVCNWVGFIDVDEFFRLPSGLILHDLIR  386 (560)
Q Consensus       356 r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~  386 (560)
                      .+  .++||+|+|.|-.+.+..-..+.+.+.
T Consensus        81 ~A--~gd~i~fLD~D~~~~~~wL~~ll~~l~  109 (299)
T cd02510          81 AA--TGDVLVFLDSHCEVNVGWLEPLLARIA  109 (299)
T ss_pred             Hc--cCCEEEEEeCCcccCccHHHHHHHHHH
Confidence            64  789999999999985432233334333

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine

Probab=98.23  E-value=1.3e-05  Score=77.09  Aligned_cols=113  Identities=16%  Similarity=0.151  Sum_probs=71.6

Q ss_pred             EEEEecchHHHHHHHHHHHhhcC-ccEEEEEECCCCcCHHHHHHHhcc--CCceEEEEeCCC-cchHHHHHHHHHHHccC
Q 037991          284 ICTMLRNQARFIREWVMYHARIG-VQRWFIYDNNSNDNIESVIDSLSS--EKFNITRHVWPW-IKTQEAGFAHCALRARD  359 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~G-vd~f~IyDn~StD~T~eIL~~y~~--~G~~Vt~~~wp~-~~~Q~~a~ndCl~r~~~  359 (560)
                      |++.++||++.|.++|+....+. -.+|+|+|++|+|+|.++++ +..  .+..+....++. ...-..+.|..+..+..
T Consensus         1 ViIp~~Ne~~~l~~~l~sl~~~~~~~eIivvdd~S~D~t~~~~~-~~~~~~~v~~i~~~~~~~~~Gk~~aln~g~~~~~~   79 (191)
T cd06436           1 VLVPCLNEEAVIQRTLASLLRNKPNFLVLVIDDASDDDTAGIVR-LAITDSRVHLLRRHLPNARTGKGDALNAAYDQIRQ   79 (191)
T ss_pred             CEEeccccHHHHHHHHHHHHhCCCCeEEEEEECCCCcCHHHHHh-heecCCcEEEEeccCCcCCCCHHHHHHHHHHHHhh
Confidence            35668999999999999876543 35799999999999999998 332  233233333332 22333455665554321


Q ss_pred             ---------CCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEe
Q 037991          360 ---------VCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISC  401 (560)
Q Consensus       360 ---------~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~  401 (560)
                               ..+||+++|+|..+.|..   |..+...+. ++.++.+...+
T Consensus        80 ~~~~~g~~~~~d~v~~~DaD~~~~~~~---l~~~~~~~~-~~~v~~v~~~~  126 (191)
T cd06436          80 ILIEEGADPERVIIAVIDADGRLDPNA---LEAVAPYFS-DPRVAGTQSRV  126 (191)
T ss_pred             hccccccCCCccEEEEECCCCCcCHhH---HHHHHHhhc-CCceEEEeeeE
Confidence                     358999999999987643   333332222 24566655443

N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=98.23  E-value=1.7e-05  Score=72.39  Aligned_cols=96  Identities=15%  Similarity=0.061  Sum_probs=70.9

Q ss_pred             EEEEecchHHHHHHHHHHHhhc--CccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCCC
Q 037991          284 ICTMLRNQARFIREWVMYHARI--GVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVC  361 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~--Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~~  361 (560)
                      |++.++|++..|.++|++...+  ...+++|+|++|+|++.++++++.+   +++...-+...+...+.+.|+..+  .+
T Consensus         1 vii~~~~~~~~l~~~l~sl~~~~~~~~~iiivdd~s~~~~~~~~~~~~~---~~~~~~~~~~~g~~~a~n~~~~~~--~~   75 (166)
T cd04186           1 IIIVNYNSLEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELFP---EVRLIRNGENLGFGAGNNQGIREA--KG   75 (166)
T ss_pred             CEEEecCCHHHHHHHHHHHHhccCCCeEEEEEECCCCchHHHHHHHhCC---CeEEEecCCCcChHHHhhHHHhhC--CC
Confidence            3567899999999999987655  3578999999999999999988743   244443344444555667777765  89


Q ss_pred             cEEEEecCCceeecCCcchHHHHHHh
Q 037991          362 NWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       362 dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      +|++++|.|..+.+.   .+..+++.
T Consensus        76 ~~i~~~D~D~~~~~~---~l~~~~~~   98 (166)
T cd04186          76 DYVLLLNPDTVVEPG---ALLELLDA   98 (166)
T ss_pred             CEEEEECCCcEECcc---HHHHHHHH
Confidence            999999999998653   34444443

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PRK10018 putative glycosyl transferase; Provisional

Probab=98.22  E-value=1.2e-05  Score=82.98  Aligned_cols=103  Identities=13%  Similarity=-0.030  Sum_probs=72.4

Q ss_pred             ceEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccC--CceEEEEeCCCcchHHHHHHHHHH
Q 037991          280 HEMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSE--KFNITRHVWPWIKTQEAGFAHCAL  355 (560)
Q Consensus       280 ~~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~--G~~Vt~~~wp~~~~Q~~a~ndCl~  355 (560)
                      ..+||++.++|++++|.++|++...+-.  -+++|+|++|+|  .++++++.+.  ..+|....-+...+...+.|.++.
T Consensus         5 p~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~EiIVVDDgS~~--~~~~~~~~~~~~~~ri~~i~~~~n~G~~~a~N~gi~   82 (279)
T PRK10018          5 PLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTS--WEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIM   82 (279)
T ss_pred             CEEEEEEEeCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCC--HHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHH
Confidence            4699999999999999999998776544  489999999984  3344444321  123555544555566667788877


Q ss_pred             HccCCCcEEEEecCCceeecCCcchHHHHHH
Q 037991          356 RARDVCNWVGFIDVDEFFRLPSGLILHDLIR  386 (560)
Q Consensus       356 r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~  386 (560)
                      .+  .++||+++|+|..+.|..-..+.+.+.
T Consensus        83 ~a--~g~~I~~lDaDD~~~p~~l~~~~~~~~  111 (279)
T PRK10018         83 LA--QGEYITGIDDDDEWTPNRLSVFLAHKQ  111 (279)
T ss_pred             Hc--CCCEEEEECCCCCCCccHHHHHHHHHH
Confidence            64  899999999999998753233333333

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=98.21  E-value=1.3e-05  Score=77.19  Aligned_cols=111  Identities=11%  Similarity=-0.013  Sum_probs=73.1

Q ss_pred             eEEEEEEecchHHHHHHHHHHHhhcC--ccEEEEEECCCCcCHHHHHHHhccCC--ceEEEE--eCC-CcchHHHHHHHH
Q 037991          281 EMCICTMLRNQARFIREWVMYHARIG--VQRWFIYDNNSNDNIESVIDSLSSEK--FNITRH--VWP-WIKTQEAGFAHC  353 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L~EwIe~h~~~G--vd~f~IyDn~StD~T~eIL~~y~~~G--~~Vt~~--~wp-~~~~Q~~a~ndC  353 (560)
                      .++|++-++||+..|.++|+....+-  --+|+|+|++|+|+|.++++++.+.-  ..+...  .-+ +......+++..
T Consensus         2 ~vsviip~~n~~~~l~~~L~sl~~q~~~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~n~g   81 (196)
T cd02520           2 GVSILKPLCGVDPNLYENLESFFQQDYPKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNNLIKG   81 (196)
T ss_pred             CeEEEEecCCCCccHHHHHHHHHhccCCCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHHHHHH
Confidence            37899999999999999999876542  25899999999999999999885431  123222  111 222233344544


Q ss_pred             HHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEE
Q 037991          354 ALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAEL  397 (560)
Q Consensus       354 l~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai  397 (560)
                      +..  ..++|++++|+|..+.|.   .|..+++.... +.++.+
T Consensus        82 ~~~--a~~d~i~~~D~D~~~~~~---~l~~l~~~~~~-~~~~~v  119 (196)
T cd02520          82 YEE--ARYDILVISDSDISVPPD---YLRRMVAPLMD-PGVGLV  119 (196)
T ss_pred             HHh--CCCCEEEEECCCceEChh---HHHHHHHHhhC-CCCCeE
Confidence            444  479999999999887543   35555554322 244443

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=98.17  E-value=2.1e-05  Score=77.31  Aligned_cols=112  Identities=13%  Similarity=0.104  Sum_probs=74.3

Q ss_pred             EEEEEecchH-HHHHHHHHHHhhcC--ccEEEEEECCCCcCHH-HHHHHhccC-CceEEEEeC-CCcchHHHHHHHHHHH
Q 037991          283 CICTMLRNQA-RFIREWVMYHARIG--VQRWFIYDNNSNDNIE-SVIDSLSSE-KFNITRHVW-PWIKTQEAGFAHCALR  356 (560)
Q Consensus       283 sVc~i~~NEa-~~L~EwIe~h~~~G--vd~f~IyDn~StD~T~-eIL~~y~~~-G~~Vt~~~w-p~~~~Q~~a~ndCl~r  356 (560)
                      ||++-++||+ ..|.++|++...+.  ..+|+|+|++|+|++. ++++++.+. +.++....- +..+.+..+.|.++..
T Consensus         1 siiip~~ne~~~~l~~~l~sl~~q~~~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~~G~~~~a~n~g~~~   80 (236)
T cd06435           1 SIHVPCYEEPPEMVKETLDSLAALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYALER   80 (236)
T ss_pred             CeeEeeCCCcHHHHHHHHHHHHhCCCCCcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCchHHHHHHHHh
Confidence            4677889997 79999999887664  3589999999999985 444444321 323322221 1123344567877777


Q ss_pred             ccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEE
Q 037991          357 ARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELR  398 (560)
Q Consensus       357 ~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~  398 (560)
                      +...+||++++|+|..+.|   +.|.+++..... +.++.+.
T Consensus        81 a~~~~d~i~~lD~D~~~~~---~~l~~l~~~~~~-~~~~~v~  118 (236)
T cd06435          81 TAPDAEIIAVIDADYQVEP---DWLKRLVPIFDD-PRVGFVQ  118 (236)
T ss_pred             cCCCCCEEEEEcCCCCcCH---HHHHHHHHHhcC-CCeeEEe
Confidence            6555899999999987765   346666665543 4566654

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=98.08  E-value=1.5e-05  Score=75.25  Aligned_cols=98  Identities=13%  Similarity=0.042  Sum_probs=65.9

Q ss_pred             EEEEecchHHHHHHHHHHHhhc-----CccEEEEEECCCCcCHHHHHHHhccCCceEEEEe-CCCcchHHHHHHHHHHHc
Q 037991          284 ICTMLRNQARFIREWVMYHARI-----GVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHV-WPWIKTQEAGFAHCALRA  357 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~-----Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~-wp~~~~Q~~a~ndCl~r~  357 (560)
                      |++.++||++.|.++|+....+     ...+|+|+|++|+|+|.++++.+.+...++.... ....+ ...+++..+..+
T Consensus         1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n~G-~~~a~n~g~~~a   79 (181)
T cd04187           1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRNFG-QQAALLAGLDHA   79 (181)
T ss_pred             CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCCCC-cHHHHHHHHHhc
Confidence            3567899999998887765422     2348999999999999999999865443343332 22222 233455555553


Q ss_pred             cCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          358 RDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       358 ~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                        ..+|++++|+|..+.+.   .+..+++.
T Consensus        80 --~~d~i~~~D~D~~~~~~---~l~~l~~~  104 (181)
T cd04187          80 --RGDAVITMDADLQDPPE---LIPEMLAK  104 (181)
T ss_pred             --CCCEEEEEeCCCCCCHH---HHHHHHHH
Confidence              67999999999997653   34444444

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=98.02  E-value=3.5e-05  Score=75.53  Aligned_cols=88  Identities=19%  Similarity=0.106  Sum_probs=62.7

Q ss_pred             EEEecchH-HHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccC-CCc
Q 037991          285 CTMLRNQA-RFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARD-VCN  362 (560)
Q Consensus       285 c~i~~NEa-~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~-~~d  362 (560)
                      ++.++||+ +.|.++|++...+ ..+|+|+||+|+|.+.++++. .+.+  +....-+...+-..++|.++..+.. .++
T Consensus         2 vI~~yn~~~~~l~~~l~sl~~q-~~~iivvDn~s~~~~~~~~~~-~~~~--i~~i~~~~n~G~~~a~N~g~~~a~~~~~d   77 (237)
T cd02526           2 VVVTYNPDLSKLKELLAALAEQ-VDKVVVVDNSSGNDIELRLRL-NSEK--IELIHLGENLGIAKALNIGIKAALENGAD   77 (237)
T ss_pred             EEEEecCCHHHHHHHHHHHhcc-CCEEEEEeCCCCccHHHHhhc-cCCc--EEEEECCCceehHHhhhHHHHHHHhCCCC
Confidence            35689999 9999999998776 689999999999888776654 2223  3333333323334456677666533 679


Q ss_pred             EEEEecCCceeecC
Q 037991          363 WVGFIDVDEFFRLP  376 (560)
Q Consensus       363 WVlflDaDEfL~p~  376 (560)
                      |++++|+|..+.|.
T Consensus        78 ~v~~lD~D~~~~~~   91 (237)
T cd02526          78 YVLLFDQDSVPPPD   91 (237)
T ss_pred             EEEEECCCCCcCHh
Confidence            99999999998653

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=97.99  E-value=4.2e-05  Score=71.70  Aligned_cols=100  Identities=14%  Similarity=0.034  Sum_probs=67.7

Q ss_pred             EEEEecchHHHHHHHHHHHhhc--CccEEEEEECCCCcCHHHHHHHhccC-CceEEEEeCCCcc-hHHHHHHHHHHHccC
Q 037991          284 ICTMLRNQARFIREWVMYHARI--GVQRWFIYDNNSNDNIESVIDSLSSE-KFNITRHVWPWIK-TQEAGFAHCALRARD  359 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~--Gvd~f~IyDn~StD~T~eIL~~y~~~-G~~Vt~~~wp~~~-~Q~~a~ndCl~r~~~  359 (560)
                      |++.++|++..|.++|+....+  .-.+++|+|++|+|+|.++++.+.+. +..+....-+..+ .-..+.|.++..+  
T Consensus         1 ivip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~a--   78 (182)
T cd06420           1 LIITTYNRPEALELVLKSVLNQSILPFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIAAA--   78 (182)
T ss_pred             CEEeecCChHHHHHHHHHHHhccCCCCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHHHh--
Confidence            3566799999999999987653  24689999999999999999988542 2222222112111 2223456666654  


Q ss_pred             CCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          360 VCNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       360 ~~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                      .++|++++|+|..+.+.   -|..+++..
T Consensus        79 ~g~~i~~lD~D~~~~~~---~l~~~~~~~  104 (182)
T cd06420          79 KGDYLIFIDGDCIPHPD---FIADHIELA  104 (182)
T ss_pred             cCCEEEEEcCCcccCHH---HHHHHHHHh
Confidence            78999999999987542   355555554

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=97.93  E-value=0.00012  Score=78.22  Aligned_cols=113  Identities=11%  Similarity=0.042  Sum_probs=74.7

Q ss_pred             ceEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccCC--ceEEEEeC--CCcchHHH-HHHH
Q 037991          280 HEMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSEK--FNITRHVW--PWIKTQEA-GFAH  352 (560)
Q Consensus       280 ~~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G--~~Vt~~~w--p~~~~Q~~-a~nd  352 (560)
                      ..+||++-++||++.|.++|++...+--  -+|+|.|++|+|.|.++++++.+..  .+|....-  +.....+. +.+.
T Consensus        41 p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K~~~l~~  120 (373)
T TIGR03472        41 PPVSVLKPLHGDEPELYENLASFCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHGPNRKVSNLIN  120 (373)
T ss_pred             CCeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCCCChHHHHHHH
Confidence            4589999999999999999999876643  5889999999999999998886532  22322221  11111221 2222


Q ss_pred             HHHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEE
Q 037991          353 CALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELR  398 (560)
Q Consensus       353 Cl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~  398 (560)
                      .+..  .++||++++|+|-.+.|   +-|..+++...+ ++++.+.
T Consensus       121 ~~~~--a~ge~i~~~DaD~~~~p---~~L~~lv~~~~~-~~v~~V~  160 (373)
T TIGR03472       121 MLPH--ARHDILVIADSDISVGP---DYLRQVVAPLAD-PDVGLVT  160 (373)
T ss_pred             HHHh--ccCCEEEEECCCCCcCh---hHHHHHHHHhcC-CCcceEe
Confidence            2223  58999999999987754   335566555543 3555543

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=97.83  E-value=5.8e-05  Score=73.65  Aligned_cols=115  Identities=14%  Similarity=0.195  Sum_probs=65.3

Q ss_pred             eEEEEEEecchHHHHHHHHHHHhhc--CccEEEEEECCCCcCHHHHHHHhcc----CCceEEEEeC-CCcchHHHHHHHH
Q 037991          281 EMCICTMLRNQARFIREWVMYHARI--GVQRWFIYDNNSNDNIESVIDSLSS----EKFNITRHVW-PWIKTQEAGFAHC  353 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L~EwIe~h~~~--Gvd~f~IyDn~StD~T~eIL~~y~~----~G~~Vt~~~w-p~~~~Q~~a~ndC  353 (560)
                      .|+|++.++||...|.++|++...+  .--+++|+|++++|++.++++++.+    .++.+....- ++...-..+.|.+
T Consensus         2 ~v~Vvip~~~~~~~l~~~l~sl~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~n~~   81 (228)
T PF13641_consen    2 RVSVVIPAYNEDDVLRRCLESLLAQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARALNEA   81 (228)
T ss_dssp             -EEEE--BSS-HHHHHHHHHHHTTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHHHHHH
T ss_pred             EEEEEEEecCCHHHHHHHHHHHHcCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHHHHHH
Confidence            4889989999999999999987643  2467899999999998777765432    2322222221 1111223456777


Q ss_pred             HHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEe
Q 037991          354 ALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISC  401 (560)
Q Consensus       354 l~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~  401 (560)
                      +...  .++|++++|.|.++.|.   .|..+++.+ ..+.++.+....
T Consensus        82 ~~~~--~~d~i~~lD~D~~~~p~---~l~~~~~~~-~~~~~~~v~~~~  123 (228)
T PF13641_consen   82 LAAA--RGDYILFLDDDTVLDPD---WLERLLAAF-ADPGVGAVGGPV  123 (228)
T ss_dssp             HHH-----SEEEEE-SSEEE-CH---HHHHHHHHH-HBSS--EEEEEE
T ss_pred             HHhc--CCCEEEEECCCcEECHH---HHHHHHHHH-HhCCCCeEeeeE
Confidence            7764  69999999999998553   455555555 223567766443

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional

Probab=97.80  E-value=0.00018  Score=84.34  Aligned_cols=116  Identities=13%  Similarity=0.146  Sum_probs=78.1

Q ss_pred             ceEEEEEEecchHH-HHHHHHHHHhhcCc--c--EEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCc-chHHHHHHHH
Q 037991          280 HEMCICTMLRNQAR-FIREWVMYHARIGV--Q--RWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWI-KTQEAGFAHC  353 (560)
Q Consensus       280 ~~lsVc~i~~NEa~-~L~EwIe~h~~~Gv--d--~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~-~~Q~~a~ndC  353 (560)
                      ..++|++-+|||+. .+.+.|.....+--  +  +|+|.|++|+|++.++++++   |..+  ..-+.. +.-..+.|++
T Consensus       260 P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~la~~~---~v~y--I~R~~n~~gKAGnLN~a  334 (852)
T PRK11498        260 PTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQEV---GVKY--IARPTHEHAKAGNINNA  334 (852)
T ss_pred             CcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHHHHHC---CcEE--EEeCCCCcchHHHHHHH
Confidence            37899989999985 45678775432211  2  79999999999999999987   5432  222322 2223467888


Q ss_pred             HHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEeeeeC
Q 037991          354 ALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFG  405 (560)
Q Consensus       354 l~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~~~fg  405 (560)
                      +..+  ++|||+++|+|-.+.+   +.+...+.....+++++.+..+..+++
T Consensus       335 L~~a--~GEyIavlDAD~ip~p---dfL~~~V~~f~~dP~VglVQtp~~f~n  381 (852)
T PRK11498        335 LKYA--KGEFVAIFDCDHVPTR---SFLQMTMGWFLKDKKLAMMQTPHHFFS  381 (852)
T ss_pred             HHhC--CCCEEEEECCCCCCCh---HHHHHHHHHHHhCCCeEEEEcceeccC
Confidence            7764  8899999999998643   345555544333457888776554443

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

Probab=97.71  E-value=0.00069  Score=59.67  Aligned_cols=91  Identities=11%  Similarity=0.102  Sum_probs=65.4

Q ss_pred             EEEEecchHHHHHHHHHHHhhcC--ccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCCC
Q 037991          284 ICTMLRNQARFIREWVMYHARIG--VQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVC  361 (560)
Q Consensus       284 Vc~i~~NEa~~L~EwIe~h~~~G--vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~~  361 (560)
                      +++.++|+...|.+.++....++  ..+++|+|++++|.+.+.++++.+....+....-+.......+.+.++...  ..
T Consensus         1 iii~~~~~~~~l~~~l~s~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~   78 (156)
T cd00761           1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEENQGLAAARNAGLKAA--RG   78 (156)
T ss_pred             CEEeecCcHHHHHHHHHHHHhCCccceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEEecCCCChHHHHHHHHHHh--cC
Confidence            35678999999999999988776  789999999999999999988865311122222222223333445554443  79


Q ss_pred             cEEEEecCCceeecC
Q 037991          362 NWVGFIDVDEFFRLP  376 (560)
Q Consensus       362 dWVlflDaDEfL~p~  376 (560)
                      +|++++|.|..+.+.
T Consensus        79 d~v~~~d~D~~~~~~   93 (156)
T cd00761          79 EYILFLDADDLLLPD   93 (156)
T ss_pred             CEEEEECCCCccCcc
Confidence            999999999998764

Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function

Probab=97.67  E-value=0.00018  Score=69.61  Aligned_cols=95  Identities=16%  Similarity=0.104  Sum_probs=66.6

Q ss_pred             EEEEEEecchHHHHHHHHHHHhhcC--ccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccC
Q 037991          282 MCICTMLRNQARFIREWVMYHARIG--VQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARD  359 (560)
Q Consensus       282 lsVc~i~~NEa~~L~EwIe~h~~~G--vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~  359 (560)
                      ++|++.++|+++.|.++|+....+=  -.+++|+|++|+|++.+++++.   +..+ ...-++.   -.+.|.++..+  
T Consensus         1 vsvii~~~n~~~~l~~~l~sl~~q~~~~~evivvdd~s~d~~~~~~~~~---~~~~-~~~~~g~---~~a~n~g~~~a--   71 (221)
T cd02522           1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIVVDGGSTDGTVAIARSA---GVVV-ISSPKGR---ARQMNAGAAAA--   71 (221)
T ss_pred             CEEEEEccCcHHHHHHHHHHHHhccCCCcEEEEEeCCCCccHHHHHhcC---CeEE-EeCCcCH---HHHHHHHHHhc--
Confidence            4788889999999999999876542  3689999999999999998873   4322 2222332   23445555554  


Q ss_pred             CCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          360 VCNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       360 ~~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                      .++||+++|.|..+.+   ..+..++...
T Consensus        72 ~~~~i~~~D~D~~~~~---~~l~~l~~~~   97 (221)
T cd02522          72 RGDWLLFLHADTRLPP---DWDAAIIETL   97 (221)
T ss_pred             cCCEEEEEcCCCCCCh---hHHHHHHHHh
Confidence            5899999999998864   2355544444

Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)

Probab=97.57  E-value=0.00052  Score=79.66  Aligned_cols=119  Identities=10%  Similarity=0.048  Sum_probs=75.5

Q ss_pred             ceEEEEEEecchHHHH-HHHHHHHhhcCc----cEEEEEECCCCcCH--------------HHHHHHhcc-CCceEEEEe
Q 037991          280 HEMCICTMLRNQARFI-REWVMYHARIGV----QRWFIYDNNSNDNI--------------ESVIDSLSS-EKFNITRHV  339 (560)
Q Consensus       280 ~~lsVc~i~~NEa~~L-~EwIe~h~~~Gv----d~f~IyDn~StD~T--------------~eIL~~y~~-~G~~Vt~~~  339 (560)
                      ..++|++-+|||+..+ .+.++....+--    -+|+|+|++|||+|              .+.++++.+ .|.  .+..
T Consensus       131 P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v--~yi~  208 (713)
T TIGR03030       131 PTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGV--NYIT  208 (713)
T ss_pred             CeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCc--EEEE
Confidence            4799999999998755 568887544322    27999999999987              233334332 243  2222


Q ss_pred             CCCc-chHHHHHHHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEeeeeC
Q 037991          340 WPWI-KTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFG  405 (560)
Q Consensus       340 wp~~-~~Q~~a~ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~~~fg  405 (560)
                      -+.. +.-..+.|+++.++  ++|||+++|+|-++.+   +.|.+.+..+..+++++.+..+..+++
T Consensus       209 r~~n~~~KAgnLN~al~~a--~gd~Il~lDAD~v~~p---d~L~~~v~~f~~dp~v~~Vqtp~~f~~  270 (713)
T TIGR03030       209 RPRNVHAKAGNINNALKHT--DGELILIFDADHVPTR---DFLQRTVGWFVEDPKLFLVQTPHFFVS  270 (713)
T ss_pred             CCCCCCCChHHHHHHHHhc--CCCEEEEECCCCCcCh---hHHHHHHHHHHhCCCEEEEeCCeeccC
Confidence            2222 22233578887764  7899999999999764   346666655543456777665444443

Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=97.41  E-value=0.0007  Score=68.94  Aligned_cols=93  Identities=14%  Similarity=-0.008  Sum_probs=60.9

Q ss_pred             ecch-HHHHHHHHHHHhhcCccEEEEEECCCCcC--HHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHc-cCCCcE
Q 037991          288 LRNQ-ARFIREWVMYHARIGVQRWFIYDNNSNDN--IESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRA-RDVCNW  363 (560)
Q Consensus       288 ~~NE-a~~L~EwIe~h~~~Gvd~f~IyDn~StD~--T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~-~~~~dW  363 (560)
                      +||. ...|.++|+....+ .++|+|+||+|+|.  +.++++.+    ..|+...-+...+...++|..+..+ ...+||
T Consensus         2 tyn~~~~~l~~~l~sl~~q-~~~iiVVDN~S~~~~~~~~~~~~~----~~i~~i~~~~N~G~a~a~N~Gi~~a~~~~~d~   76 (281)
T TIGR01556         2 TFNPDLEHLGELITSLPKQ-VDRIIAVDNSPHSDQPLKNARLRG----QKIALIHLGDNQGIAGAQNQGLDASFRRGVQG   76 (281)
T ss_pred             ccCccHHHHHHHHHHHHhc-CCEEEEEECcCCCcHhHHHHhccC----CCeEEEECCCCcchHHHHHHHHHHHHHCCCCE
Confidence            6884 68999999987654 78999999998754  34444333    2355554444444445566555443 247899


Q ss_pred             EEEecCCceeecCCcchHHHHHHhc
Q 037991          364 VGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       364 VlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                      |+++|.|..+.+.   .|..+++..
T Consensus        77 i~~lD~D~~~~~~---~l~~l~~~~   98 (281)
T TIGR01556        77 VLLLDQDSRPGNA---FLAAQWKLL   98 (281)
T ss_pred             EEEECCCCCCCHH---HHHHHHHHH
Confidence            9999999998753   344444433

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>PRK05454 glucosyltransferase MdoH; Provisional

Probab=97.18  E-value=0.0041  Score=71.83  Aligned_cols=122  Identities=15%  Similarity=0.132  Sum_probs=80.1

Q ss_pred             CCceEEEEEEecchHH-----HHHHHHHHHhhcCc---cEEEEEECCCCcCHHH--------HHHHhccCCceEEEEeCC
Q 037991          278 KDHEMCICTMLRNQAR-----FIREWVMYHARIGV---QRWFIYDNNSNDNIES--------VIDSLSSEKFNITRHVWP  341 (560)
Q Consensus       278 ~~~~lsVc~i~~NEa~-----~L~EwIe~h~~~Gv---d~f~IyDn~StD~T~e--------IL~~y~~~G~~Vt~~~wp  341 (560)
                      ....++|++-++||+.     .|++++++...++-   =+|+|.|++++|++..        +.++|.. +.+|.+..-+
T Consensus       122 ~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~-~~~i~yr~R~  200 (691)
T PRK05454        122 PEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGG-EGRIFYRRRR  200 (691)
T ss_pred             CCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCcEEEEECC
Confidence            4457888888999984     57888876554443   2689999999988753        3444432 2235444333


Q ss_pred             CcchHHH-HHHHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEeee
Q 037991          342 WIKTQEA-GFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHS  403 (560)
Q Consensus       342 ~~~~Q~~-a~ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~~~  403 (560)
                      ....-++ +.++.+.+....+|||+.+|+|-.+.+   +.|..++...+.+|.+|.+..+...
T Consensus       201 ~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~---d~L~~lv~~m~~dP~vGlVQt~~~~  260 (691)
T PRK05454        201 RNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSG---DTLVRLVRLMEANPRAGLIQTLPVA  260 (691)
T ss_pred             cCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCH---HHHHHHHHHHhhCcCEEEEeCCccC
Confidence            2222233 566666666678899999999999875   4566666665545678888754433

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=97.14  E-value=0.0047  Score=64.16  Aligned_cols=114  Identities=15%  Similarity=0.077  Sum_probs=73.2

Q ss_pred             ceEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHc
Q 037991          280 HEMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRA  357 (560)
Q Consensus       280 ~~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~  357 (560)
                      +.+++++.++|..+.+.+||+....+..  ++++++||+|+|++.+.++... .+ +|....-+...+=..++|..+..+
T Consensus         3 ~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~~~~~~~~~-~~-~v~~i~~~~NlG~agg~n~g~~~a   80 (305)
T COG1216           3 PKISIIIVTYNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKARF-FP-NVRLIENGENLGFAGGFNRGIKYA   80 (305)
T ss_pred             cceEEEEEecCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCCHHHHHhhc-CC-cEEEEEcCCCccchhhhhHHHHHH
Confidence            4689999999999999999998887664  4455679999999999998862 12 244443332222222334344443


Q ss_pred             cCC-CcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEE
Q 037991          358 RDV-CNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELR  398 (560)
Q Consensus       358 ~~~-~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~  398 (560)
                      ... .+|+++++-|.++.+   +.|.++++..+..+.++.+.
T Consensus        81 ~~~~~~~~l~LN~D~~~~~---~~l~~ll~~~~~~~~~~~~~  119 (305)
T COG1216          81 LAKGDDYVLLLNPDTVVEP---DLLEELLKAAEEDPAAGVVG  119 (305)
T ss_pred             hcCCCcEEEEEcCCeeeCh---hHHHHHHHHHHhCCCCeEee
Confidence            233 339999999944443   45666666655544444443

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=97.13  E-value=0.0047  Score=66.51  Aligned_cols=106  Identities=15%  Similarity=0.150  Sum_probs=77.6

Q ss_pred             ceEEEEEEecchHH-HHHHHHHHHhhcCcc--EEEEEECCCCcCHHHHHHHhccCC-ceEEEEeCC--CcchHHHHHHHH
Q 037991          280 HEMCICTMLRNQAR-FIREWVMYHARIGVQ--RWFIYDNNSNDNIESVIDSLSSEK-FNITRHVWP--WIKTQEAGFAHC  353 (560)
Q Consensus       280 ~~lsVc~i~~NEa~-~L~EwIe~h~~~Gvd--~f~IyDn~StD~T~eIL~~y~~~G-~~Vt~~~wp--~~~~Q~~a~ndC  353 (560)
                      ..+++.+-++||+. .+++++++...+...  +++++|++++|++.++++++.+.- .++... .+  ..+.-..+.+..
T Consensus        54 p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~gK~~al~~~  132 (439)
T COG1215          54 PKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVI-YPEKKNGGKAGALNNG  132 (439)
T ss_pred             CceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEE-eccccCccchHHHHHH
Confidence            67889888999998 999999988765443  899999999999999999996542 122222 22  112223456677


Q ss_pred             HHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCC
Q 037991          354 ALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGD  391 (560)
Q Consensus       354 l~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~  391 (560)
                      +..+  .+|+|+++|+|-.+.+   +.|.+++....+.
T Consensus       133 l~~~--~~d~V~~~DaD~~~~~---d~l~~~~~~f~~~  165 (439)
T COG1215         133 LKRA--KGDVVVILDADTVPEP---DALRELVSPFEDP  165 (439)
T ss_pred             Hhhc--CCCEEEEEcCCCCCCh---hHHHHHHhhhcCC
Confidence            6665  5999999999999875   3577777766553

>PRK14716 bacteriophage N4 adsorption protein B; Provisional

Probab=97.07  E-value=0.0043  Score=69.26  Aligned_cols=99  Identities=8%  Similarity=0.003  Sum_probs=67.3

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHHh-hcC--ccEEEEEECCCCcCHHHHHHHhccCCceEE--EEeCCCcchHHHHHHH
Q 037991          278 KDHEMCICTMLRNQARFIREWVMYHA-RIG--VQRWFIYDNNSNDNIESVIDSLSSEKFNIT--RHVWPWIKTQEAGFAH  352 (560)
Q Consensus       278 ~~~~lsVc~i~~NEa~~L~EwIe~h~-~~G--vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt--~~~wp~~~~Q~~a~nd  352 (560)
                      +...++|.+-.+||++.|.++|++.. .+-  --+|+|.|.+|+|+|.++++++.+....+.  ..+-++...-..++|.
T Consensus        64 ~~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~~~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv~~~~gp~~Ka~aLN~  143 (504)
T PRK14716         64 PEKRIAIFVPAWREADVIGRMLEHNLATLDYENYRIFVGTYPNDPATLREVDRLAARYPRVHLVIVPHDGPTSKADCLNW  143 (504)
T ss_pred             CCCceEEEEeccCchhHHHHHHHHHHHcCCCCCeEEEEEECCCChhHHHHHHHHHHHCCCeEEEEeCCCCCCCHHHHHHH
Confidence            34578999999999999999999752 221  237999999999999999998765443332  2222232222335555


Q ss_pred             HHHHc-------cCCCcEEEEecCCceeecC
Q 037991          353 CALRA-------RDVCNWVGFIDVDEFFRLP  376 (560)
Q Consensus       353 Cl~r~-------~~~~dWVlflDaDEfL~p~  376 (560)
                      .+...       ...+|+++++|+|..+.|.
T Consensus       144 ~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd  174 (504)
T PRK14716        144 IYQAIFAFERERGIRFAIIVLHDAEDVIHPL  174 (504)
T ss_pred             HHHHHHHhhhhcCCCcCEEEEEcCCCCcCcc
Confidence            44321       1245999999999998874

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan

Probab=96.81  E-value=0.014  Score=59.55  Aligned_cols=121  Identities=12%  Similarity=0.134  Sum_probs=72.6

Q ss_pred             EEEEEEecchHHH-HHHHHHHHhh----cC---ccEEEEEECCCCcCHHH--------HHHHhccCCceEEEEeCCCcch
Q 037991          282 MCICTMLRNQARF-IREWVMYHAR----IG---VQRWFIYDNNSNDNIES--------VIDSLSSEKFNITRHVWPWIKT  345 (560)
Q Consensus       282 lsVc~i~~NEa~~-L~EwIe~h~~----~G---vd~f~IyDn~StD~T~e--------IL~~y~~~G~~Vt~~~wp~~~~  345 (560)
                      +||.+-++||+.. |.+.|+....    ++   -=+|+|.|+++++....        +.+++.+ +..|.+..-+...+
T Consensus         1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~-~~~v~~~~r~~~~g   79 (254)
T cd04191           1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADHFDFFILSDTRDPDIWLAEEAAWLDLCEELGA-QGRIYYRRRRENTG   79 (254)
T ss_pred             CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCceEEEEECCCCChHHHHHHHHHHHHHHHHhCC-CCcEEEEEcCCCCC
Confidence            3677778999876 7777765331    22   34788888877654321        3344543 44454443332222


Q ss_pred             HH-HHHHHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEeeeeCC
Q 037991          346 QE-AGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFGP  406 (560)
Q Consensus       346 Q~-~a~ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~~~fg~  406 (560)
                      -+ .+++..+......+++|+++|+|-.+.|.   .|..++..+..+|.++.+..+..+++.
T Consensus        80 ~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~---~l~~~v~~~~~~~~vg~vq~~~~~~n~  138 (254)
T cd04191          80 RKAGNIADFCRRWGSRYDYMVVLDADSLMSGD---TIVRLVRRMEANPRAGIIQTAPKLIGA  138 (254)
T ss_pred             ccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHH---HHHHHHHHHHhCCCEEEEeCCceeECC
Confidence            22 24455544333578999999999998763   456666555434678888766555543

Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin

Probab=96.78  E-value=0.0069  Score=60.69  Aligned_cols=95  Identities=11%  Similarity=0.085  Sum_probs=62.3

Q ss_pred             EEEEecchH-HHHHHHHHHHhhcCcc------------EEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHH--
Q 037991          284 ICTMLRNQA-RFIREWVMYHARIGVQ------------RWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEA--  348 (560)
Q Consensus       284 Vc~i~~NEa-~~L~EwIe~h~~~Gvd------------~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~--  348 (560)
                      |++-++||+ +.|.+.|++...+-..            +|+|+|+||+|         .+.|.         ...|..  
T Consensus         1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d---------~~~gk---------~~~~~~~~   62 (244)
T cd04190           1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK---------KNRGK---------RDSQLWFF   62 (244)
T ss_pred             CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc---------ccCcc---------hHHHHHHH
Confidence            456689996 8999999987766665            78999999999         11231         112222  


Q ss_pred             -HHHHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEe
Q 037991          349 -GFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISC  401 (560)
Q Consensus       349 -a~ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~  401 (560)
                       .++..+.  ....+||+++|+|-.+.+.   .|..+++.+..+|.++++.-..
T Consensus        63 ~~~~~~~~--~a~~e~i~~~DaD~~~~~~---~l~~l~~~~~~~p~vg~v~g~~  111 (244)
T cd04190          63 NYFCRVLF--PDDPEFILLVDADTKFDPD---SIVQLYKAMDKDPEIGGVCGEI  111 (244)
T ss_pred             HHHHHHhh--cCCCCEEEEECCCCcCCHh---HHHHHHHHHHhCCCEEEEEeee
Confidence             2222222  3589999999999999753   4555555543345677765443

Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.

>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni []

Probab=96.57  E-value=0.0067  Score=62.96  Aligned_cols=99  Identities=14%  Similarity=0.146  Sum_probs=69.6

Q ss_pred             CCCceEEEEEEecchHHHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCC---------cchHH
Q 037991          277 EKDHEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPW---------IKTQE  347 (560)
Q Consensus       277 ~~~~~lsVc~i~~NEa~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~---------~~~Q~  347 (560)
                      +.+...++.+-++||+..|.++|++..- .+|+.+|.-|.|+|+|.||+.+|.+.-..-....+|.         ...+.
T Consensus        84 ~~pl~~~~~iRvKnE~~tl~~si~S~Lp-ai~~gVI~yNdc~D~t~Eiil~fckkyP~fip~~Ypy~v~~~n~~~~~n~l  162 (347)
T PF06306_consen   84 KSPLNPWAFIRVKNEAMTLAESIESILP-AIDEGVIGYNDCTDGTEEIILEFCKKYPSFIPIKYPYEVIIKNPKSEENSL  162 (347)
T ss_pred             CCCCCcceEEEEcchhhhHHHHHHHHHH-HHhccEEEeecCCCCHHHHHHHHHHhCcccccccCcchhhccCCchhhhhh
Confidence            4567788999999999999999999853 4799999999999999999999976432211112221         11222


Q ss_pred             HHHHHHHHHccCCCcEEEEecCCceeecC
Q 037991          348 AGFAHCALRARDVCNWVGFIDVDEFFRLP  376 (560)
Q Consensus       348 ~a~ndCl~r~~~~~dWVlflDaDEfL~p~  376 (560)
                      ..|-+..+......+|++=+|+|-+..++
T Consensus       163 ~~YYNy~ls~ipk~~w~iKID~DhIy~~~  191 (347)
T PF06306_consen  163 YNYYNYVLSFIPKNEWAIKIDADHIYDTK  191 (347)
T ss_pred             hhhhhhhhcccccceEEEEeccceeecHH
Confidence            22222222223578999999999998764

>KOG4735 consensus Extracellular protein with conserved cysteines [Function unknown]

Probab=96.47  E-value=0.023  Score=62.77  Aligned_cols=207  Identities=14%  Similarity=0.266  Sum_probs=131.7

Q ss_pred             CCCEEEEEEeeecccccccCCceEEEEEeecCCcceeeEeeeeeee-eeeeeecCCCccccCCCCCCceeEEEEEEcCCe
Q 037991          180 DNTTLVFIKGLNLRRDRAYNPSRFECVYGWDFRRIKFLLRSELLSI-GQEVGRCETPLSVLSGPHRDDFIKVSIRLKGKG  258 (560)
Q Consensus       180 ~~~~vv~v~g~n~r~~~~~~~~~~~C~y~~~~~~~~~~~~~~~~s~-~q~virC~~p~~i~~~~~~~~~i~VSi~~~~~~  258 (560)
                      +.++++++..+|.+.....++ ...-. +.+.+... +  ..+.+. ....+.|.+-+.++......+.-++.++..+..
T Consensus        28 g~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~t~~~-~--~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~s~~~~  102 (472)
T KOG4735|consen   28 GENAVALVMTMNLRTVPNLKN-EINLI-GSNSTSST-V--TDAPSTTHEPSDSCSYVTIFAQANLLPNLKKLELESEGNL  102 (472)
T ss_pred             Ccceeeeeeecccccccccce-eEEEE-EecccceE-E--eccccceecccchhhhhHHHHhhhccCccceEEEeecCCc
Confidence            458999999999988766666 22222 34443221 1  111122 234678998888876555445567788887654


Q ss_pred             -eccccc-cccCCCCCCCCCCCCceEEEEEEecchH--HHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCC-c
Q 037991          259 -IFRTVA-HPVRLSGPEPPAEKDHEMCICTMLRNQA--RFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEK-F  333 (560)
Q Consensus       259 -~iP~i~-~~~~~~~~~~~~~~~~~lsVc~i~~NEa--~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G-~  333 (560)
                       ++|... .+.        +.....+|+....-.|.  .++..-+.+. ..|..++.+|.-.+...+.+++..|.+.| .
T Consensus       103 ~~i~~~~a~~~--------~~~~vv~~~sp~~v~~~w~d~~~~~~~~~-~~~s~~~~~~~vs~~~~~~~~~~~~~~~~~~  173 (472)
T KOG4735|consen  103 TEIPFKSARYS--------APKPVVVCISPQFVYEQWQDFLRQEHVSK-RFGATHLHLYVVSCPESYFALLKEYEKLGNY  173 (472)
T ss_pred             eEeeecccccC--------CCCcEEEEecchHHHhhHHhhhhheehhh-hcCCeeEEEEEEEehHHHHHHHHHHHhcCCc
Confidence             555333 221        12233333333222232  2222222222 35777999999988999999999999988 3


Q ss_pred             eEEEEeCCC------------------cchHHHHHHHHHHHccCCCcEEEEecCCceeecCCcch-HHHHHHhcCCCCCE
Q 037991          334 NITRHVWPW------------------IKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLI-LHDLIRNLSGDGSV  394 (560)
Q Consensus       334 ~Vt~~~wp~------------------~~~Q~~a~ndCl~r~~~~~dWVlflDaDEfL~p~~~~s-I~d~L~~~~~~~~v  394 (560)
                       ++..+|.-                  .++|..+..+|++++++.++++++.|.|.+++|....+ -.+++..+...+.+
T Consensus       174 -~~~~~~~~~~~~~~~~p~~ep~~~vc~~~~~g~~~d~L~~~~E~~k~~g~~~~~di~~~~~~~~Y~~e~l~~y~~~~~v  252 (472)
T KOG4735|consen  174 -VTLPPWLPLKFRNTDEPYHEPNLNVELRNQAGAETDCLLQYKEAAKFIGFFDLDDILIPRNANTYDEEFLREYVGSGNI  252 (472)
T ss_pred             -cccCCCcccccCCCCCCccCcccceEecccchhhhhHHHHHHHHHHHhccccHhheeeeccCchHHHHHHHHhhcCCCe
Confidence             33344511                  25788889999999999999999999999999887766 45677777665566


Q ss_pred             eEEEEEe
Q 037991          395 AELRISC  401 (560)
Q Consensus       395 ~ai~~~~  401 (560)
                      ..+.+..
T Consensus       253 ~~~~~~~  259 (472)
T KOG4735|consen  253 EVIFYQK  259 (472)
T ss_pred             eEEEeee
Confidence            6666543

>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]

Probab=96.24  E-value=0.021  Score=55.36  Aligned_cols=105  Identities=15%  Similarity=0.147  Sum_probs=69.8

Q ss_pred             eEEEEEEecchHHHHH--HHHH--HHhhcCc-cEEEEEECCCCcCHHHHHHHhccC--CceEEEEeCCCcchHHHHHHHH
Q 037991          281 EMCICTMLRNQARFIR--EWVM--YHARIGV-QRWFIYDNNSNDNIESVIDSLSSE--KFNITRHVWPWIKTQEAGFAHC  353 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L~--EwIe--~h~~~Gv-d~f~IyDn~StD~T~eIL~~y~~~--G~~Vt~~~wp~~~~Q~~a~ndC  353 (560)
                      +-+|..-+|||-.+|.  -|+-  +....|. -+++|+|++|-|+|.++++.+++.  +.+|-..+...--.--.|+-+.
T Consensus         4 kYsvilPtYnEk~Nlpi~~~li~~~~~e~~~~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~klGLgtAy~hg   83 (238)
T KOG2978|consen    4 KYSVILPTYNEKENLPIITRLIAKYMSEEGKKYEIIIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKKLGLGTAYIHG   83 (238)
T ss_pred             ceeEEeccccCCCCCeeeHHHHHhhhhhhcCceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCcccchHHHHhh
Confidence            4577778899987663  2322  3333465 579999999999999999996632  3345444443322333355666


Q ss_pred             HHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCC
Q 037991          354 ALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSG  390 (560)
Q Consensus       354 l~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~  390 (560)
                      +..  ++.+++..+|+|=-=.|   ..|.++++...+
T Consensus        84 l~~--a~g~fiviMDaDlsHhP---k~ipe~i~lq~~  115 (238)
T KOG2978|consen   84 LKH--ATGDFIVIMDADLSHHP---KFIPEFIRLQKE  115 (238)
T ss_pred             hhh--ccCCeEEEEeCccCCCc---hhHHHHHHHhhc
Confidence            665  49999999999954333   468888887654

>KOG2977 consensus Glycosyltransferase [General function prediction only]

Probab=96.04  E-value=0.033  Score=57.14  Aligned_cols=104  Identities=15%  Similarity=0.080  Sum_probs=67.6

Q ss_pred             CCceEEEEEEecchHH----HHHHHHHHHh--hcC----ccEEEEEECCCCcCHHHHHHHhc-cCCce-EEEEe---CCC
Q 037991          278 KDHEMCICTMLRNQAR----FIREWVMYHA--RIG----VQRWFIYDNNSNDNIESVIDSLS-SEKFN-ITRHV---WPW  342 (560)
Q Consensus       278 ~~~~lsVc~i~~NEa~----~L~EwIe~h~--~~G----vd~f~IyDn~StD~T~eIL~~y~-~~G~~-Vt~~~---wp~  342 (560)
                      .++.++|++-.|||+.    .|.|++.|..  ...    -.+++|+|+||+|+|.+++-+|. +.|.. +.+..   -.+
T Consensus        65 ~~~~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~~a~k~s~K~~~d~irV~~l~~nrg  144 (323)
T KOG2977|consen   65 EKMYLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVEVALKFSRKLGDDNIRVIKLKKNRG  144 (323)
T ss_pred             hhceeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHHHHHHHHHHcCcceEEEeehhccCC
Confidence            4569999999999985    4577787754  233    47899999999999999998887 55632 32222   112


Q ss_pred             -cchHHHHHHHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          343 -IKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       343 -~~~Q~~a~ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                       .+.-+..    ++.  ...+.++|.|+|----...-..|...|..
T Consensus       145 KGgAvR~g----~l~--~rG~~ilfadAdGaTkf~d~ekLe~al~~  184 (323)
T KOG2977|consen  145 KGGAVRKG----MLS--SRGQKILFADADGATKFADLEKLEKALND  184 (323)
T ss_pred             CCcceehh----hHh--ccCceEEEEcCCCCccCCCHHHHHHHHHh
Confidence             1222222    233  38899999999975433333345555543

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]

Probab=95.68  E-value=0.12  Score=53.10  Aligned_cols=98  Identities=17%  Similarity=0.158  Sum_probs=59.8

Q ss_pred             EEEEecchH------HHHHHHHHHHhh---cCccEEEEEECCCCcCHHHHHHHhcc-CCce-EEEEeCCC-cchHHHHHH
Q 037991          284 ICTMLRNQA------RFIREWVMYHAR---IGVQRWFIYDNNSNDNIESVIDSLSS-EKFN-ITRHVWPW-IKTQEAGFA  351 (560)
Q Consensus       284 Vc~i~~NEa------~~L~EwIe~h~~---~Gvd~f~IyDn~StD~T~eIL~~y~~-~G~~-Vt~~~wp~-~~~Q~~a~n  351 (560)
                      |++-++++.      +.|..+|+....   ..--+|+|+|++|.+.+.+.++++.+ .+.. .....-+. .-++..+.|
T Consensus         2 iIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~~~~f~~a~arN   81 (281)
T PF10111_consen    2 IIIPVRNRSERPDILERLRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDNGEPFSRAKARN   81 (281)
T ss_pred             EEEEecCCccchHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCCCCCcCHHHHHH
Confidence            455566655      455555665443   12348999999999988555555544 3432 11112121 124555667


Q ss_pred             HHHHHccCCCcEEEEecCCceeecCCcchHHHHHH
Q 037991          352 HCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIR  386 (560)
Q Consensus       352 dCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~  386 (560)
                      ..+..+  .++||+|+|+|=++.+.   .|..+++
T Consensus        82 ~g~~~A--~~d~l~flD~D~i~~~~---~i~~~~~  111 (281)
T PF10111_consen   82 IGAKYA--RGDYLIFLDADCIPSPD---FIEKLLN  111 (281)
T ss_pred             HHHHHc--CCCEEEEEcCCeeeCHH---HHHHHHH
Confidence            766664  99999999999998764   3555554

>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides

Probab=95.56  E-value=0.11  Score=55.12  Aligned_cols=113  Identities=11%  Similarity=0.052  Sum_probs=74.8

Q ss_pred             EEEEEEecchHHHHHHHHHHHhhc--C--ccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchH-----------
Q 037991          282 MCICTMLRNQARFIREWVMYHARI--G--VQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQ-----------  346 (560)
Q Consensus       282 lsVc~i~~NEa~~L~EwIe~h~~~--G--vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q-----------  346 (560)
                      +.|+++++|.++.|.++|+....+  +  -.+++|+++|+.+++.++++.|. .+  |+....+..+..           
T Consensus         2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~~-~~--i~~i~~~~~~~~~~~~~~~~~~y   78 (334)
T cd02514           2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSFG-DG--VTHIQHPPISIKNVNPPHKFQGY   78 (334)
T ss_pred             cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhhc-cc--cEEEEcccccccccCcccccchh
Confidence            457788999999999999987755  4  36799999999999999998883 12  322222211111           


Q ss_pred             -------HHHHHHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEE
Q 037991          347 -------EAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRI  399 (560)
Q Consensus       347 -------~~a~ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~  399 (560)
                             +.+.+.....  ..++.++++|-|=.+.|.--.=+.+.+..+..++++.+|+-
T Consensus        79 ~~ia~hyk~aln~vF~~--~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa  136 (334)
T cd02514          79 YRIARHYKWALTQTFNL--FGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISA  136 (334)
T ss_pred             hHHHHHHHHHHHHHHHh--cCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEe
Confidence                   1133433333  37999999999999887532234455555555557777764

Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional

Probab=95.06  E-value=0.17  Score=59.04  Aligned_cols=100  Identities=8%  Similarity=0.044  Sum_probs=66.6

Q ss_pred             CCCceEEEEEEecchHHHHHHHHHHHh-hcCc--cEEEEEECCCCcCHHHHHHHhccC-C-ceEEEEeCCCcchHHHHHH
Q 037991          277 EKDHEMCICTMLRNQARFIREWVMYHA-RIGV--QRWFIYDNNSNDNIESVIDSLSSE-K-FNITRHVWPWIKTQEAGFA  351 (560)
Q Consensus       277 ~~~~~lsVc~i~~NEa~~L~EwIe~h~-~~Gv--d~f~IyDn~StD~T~eIL~~y~~~-G-~~Vt~~~wp~~~~Q~~a~n  351 (560)
                      +....++|.+-++||+..+.+.+++.. .+--  =+|++.+.+++|.|.++++++.+. + ..+....-++...-..++|
T Consensus        60 ~~~~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~~g~~gKa~aLN  139 (727)
T PRK11234         60 PDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPATQADVDAVCARFPNVHKVVCARPGPTSKADCLN  139 (727)
T ss_pred             CCCCCEEEEEecCcchhhHHHHHHHHHHhCCCCCeEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCCCCCCCHHHHHH
Confidence            344578999889999999999999753 2221  367887778888999999988654 2 2222222233333333566


Q ss_pred             HHHHHc-------cCCCcEEEEecCCceeecC
Q 037991          352 HCALRA-------RDVCNWVGFIDVDEFFRLP  376 (560)
Q Consensus       352 dCl~r~-------~~~~dWVlflDaDEfL~p~  376 (560)
                      .++...       +..++-++++|+|-.+.|.
T Consensus       140 ~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd  171 (727)
T PRK11234        140 NVLDAITQFERSANFAFAGFILHDAEDVISPM  171 (727)
T ss_pred             HHHHHHHhhhcccCCcccEEEEEcCCCCCChh
Confidence            655443       2356778889999999874

>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional

Probab=86.86  E-value=5.4  Score=46.59  Aligned_cols=99  Identities=7%  Similarity=0.010  Sum_probs=60.2

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHHh-hcCc--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCc--chHHHHHHH
Q 037991          278 KDHEMCICTMLRNQARFIREWVMYHA-RIGV--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWI--KTQEAGFAH  352 (560)
Q Consensus       278 ~~~~lsVc~i~~NEa~~L~EwIe~h~-~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~--~~Q~~a~nd  352 (560)
                      ....++|.+-.+||+..|.+.|++.. .+--  -+|+|.....+++|.+.++++...-..+....-|..  ..-..++|.
T Consensus        69 ~~~~vsIlVPa~nE~~VI~~~v~~ll~~ldYp~~~I~v~~~~nD~~T~~~~~~~~~~~p~~~~v~~~~~gp~gKa~ALN~  148 (703)
T PRK15489         69 DEQPLAIMVPAWKEYDVIAKMIENMLATLDYRRYVIFVGTYPNDAETITEVERMRRRYKRLVRVEVPHDGPTCKADCLNW  148 (703)
T ss_pred             CCCceEEEEeCCCcHHHHHHHHHHHHhcCCCCCeEEEEEecCCCccHHHHHHHHhccCCcEEEEEcCCCCCCCHHHHHHH
Confidence            34578999899999999999999852 2222  345553222355888888888644213333333322  222234555


Q ss_pred             HHHHc-------cCCCcEEEEecCCceeecC
Q 037991          353 CALRA-------RDVCNWVGFIDVDEFFRLP  376 (560)
Q Consensus       353 Cl~r~-------~~~~dWVlflDaDEfL~p~  376 (560)
                      .+...       +...+-|+.+|+|..+.|.
T Consensus       149 ~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~  179 (703)
T PRK15489        149 IIQAIFRYEAGHGIEFAGVILHDSEDVLHPL  179 (703)
T ss_pred             HHHHHHhhhhhccCccceEEEEcCCCCCChh
Confidence            44331       1233459999999999874

>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2

Probab=85.59  E-value=18  Score=38.86  Aligned_cols=118  Identities=15%  Similarity=0.085  Sum_probs=64.1

Q ss_pred             eEEEEEEecchHHHH-HHHHHHHhhcCccEEEEEECCCCc-C---------HHHHHHHhccCCce-EEEEeCCC------
Q 037991          281 EMCICTMLRNQARFI-REWVMYHARIGVQRWFIYDNNSND-N---------IESVIDSLSSEKFN-ITRHVWPW------  342 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L-~EwIe~h~~~Gvd~f~IyDn~StD-~---------T~eIL~~y~~~G~~-Vt~~~wp~------  342 (560)
                      +|==|.++.||-+.| ..+-|.+  -=||.|+|+.++.|- +         ..+-.+.+.+ .+. ++....+.      
T Consensus        80 rV~D~~~f~~ElDlLeiRl~eL~--~vVD~FVIvEs~~Tf~G~~KpL~f~~~~~~f~~~~~-KIiy~~l~~~~~~g~~~~  156 (356)
T PF04724_consen   80 RVYDCFLFNNELDLLEIRLNELY--DVVDYFVIVESNRTFTGKPKPLYFAENKERFAFFHD-KIIYVTLDDPPEKGRKDP  156 (356)
T ss_pred             eEEEEEEeCChHHHHHHHHHHhh--CcceEEEEEEECCCcCCCCCCccHHHHHHHHHhhhc-ceEEEEecCcCCCCCCch
Confidence            455556677898888 4444433  248999999988762 1         2233333332 211 12222221      


Q ss_pred             ---cchHHHHHHHHH-HHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEeeeeC
Q 037991          343 ---IKTQEAGFAHCA-LRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFG  405 (560)
Q Consensus       343 ---~~~Q~~a~ndCl-~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~~~fg  405 (560)
                         ...|+.++..-+ .......|-+++-|+||+..+.    -..+|+..++.+..-.+++.+..|+
T Consensus       157 w~~E~~qR~~l~~l~~~~~~~~dDliivSDvDEIP~p~----~l~~Lr~cd~~p~~l~l~lr~y~Ys  219 (356)
T PF04724_consen  157 WDRENYQRNALNGLLRLAGIQDDDLIIVSDVDEIPSPE----TLKFLRWCDGFPEPLHLRLRFYYYS  219 (356)
T ss_pred             hHHHHHHHHHHHHHhhhcCCCCCCEEEEcCcccccCHH----HHHHHHhcCCCCCeeEEEeeceEEE
Confidence               123444332211 1234689999999999997753    3455666544334445666655543

4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane

>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function

Probab=80.71  E-value=15  Score=38.07  Aligned_cols=110  Identities=22%  Similarity=0.264  Sum_probs=65.9

Q ss_pred             CCCCceEEEEEEecchHHHHHHHHHHHhhcCccE----EEEEECCCC--cCHHHHHHHhccC----C-----c-eEEEE-
Q 037991          276 AEKDHEMCICTMLRNQARFIREWVMYHARIGVQR----WFIYDNNSN--DNIESVIDSLSSE----K-----F-NITRH-  338 (560)
Q Consensus       276 ~~~~~~lsVc~i~~NEa~~L~EwIe~h~~~Gvd~----f~IyDn~St--D~T~eIL~~y~~~----G-----~-~Vt~~-  338 (560)
                      ...+-.|-|++-.+|-+.++.++.+....+--.|    +=+..+.++  |++.+.|+.+.+.    +     . .|+.. 
T Consensus        21 ~~~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itIl~  100 (269)
T PF03452_consen   21 ARNKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITILR  100 (269)
T ss_pred             cccCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEEEc
Confidence            3455678888889999999999998766554322    334556666  8888877754211    1     1 13332 


Q ss_pred             -eCCC-----------cchHHHH-------HHHHHHHcc-CCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          339 -VWPW-----------IKTQEAG-------FAHCALRAR-DVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       339 -~wp~-----------~~~Q~~a-------~ndCl~r~~-~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                       ++..           ...|...       =|..+..+- ..++||+++|+|=...|+  .-|+++++.
T Consensus       101 ~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~--~lI~dli~~  167 (269)
T PF03452_consen  101 KDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPP--TLIQDLIAH  167 (269)
T ss_pred             CCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCCh--HHHHHHHhC
Confidence             2211           2234221       122222332 389999999999886664  237777765

These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	560
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 4e-06
 Identities = 69/449 (15%), Positives = 139/449 (30%), Gaps = 126/449 (28%)

Query: 95  RLFTEEDFQCVYYPANSSRPFE-LKLKQ--------PPIRIDG--------------RDF 131
           RL+ +     V+   N SR    LKL+Q          + IDG                +
Sbjct: 118 RLYNDNQ---VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY 174

Query: 132 DEQILRCRIPPRGFNISL-DLNRHRNIINIPVGYVHRWDSVSYEAVFDRDNTTLVFIKGL 190
             Q   C++  + F ++L + N    ++ +    +++ D  ++ +  D  +   + I  +
Sbjct: 175 KVQ---CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP-NWTSRSDHSSNIKLRIHSI 230

Query: 191 N--LRR---DRAYNPSRFEC------VYGWDFRRIK-FLLRSELLSIGQEVGRCETPLSV 238
              LRR    + Y      C      V   + +    F L  ++L       R +     
Sbjct: 231 QAELRRLLKSKPYE----NCLLVLLNV--QNAKAWNAFNLSCKILLTT----RFKQVTDF 280

Query: 239 LSGPHRDDFIKVSIRL-----KGKGIFRTVAHPVRLSGPEPPAEKDHEMC-----ICTML 288
           LS             +     + K +               P +   E+        +++
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYLD-------CRPQDLPREVLTTNPRRLSII 333

Query: 289 RNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVID-SLSSEKFNITRH------VWP 341
              A  IR+ +          W  + + + D + ++I+ SL+  +    R       V+P
Sbjct: 334 ---AESIRDGLA--------TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382

Query: 342 ---WIKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELR 398
               I T         +       W   I  D        ++++ L +    +    E  
Sbjct: 383 PSAHIPTI----LLSLI-------WFDVIKSDVM------VVVNKLHKYSLVEKQPKEST 425

Query: 399 ISCHSFGPSGLKEVPKKGVMVGYTCRLATPERHKSIVKPEALNSTLINVVHHFHL--RDG 456
           IS  S       ++  +  +            H+SIV  +  N               D 
Sbjct: 426 ISIPSIYLELKVKLENEYAL------------HRSIV--DHYNIPKTFDSDDLIPPYLDQ 471

Query: 457 FEYVNVNRSMLVINHYKYQVWEVFKDKFL 485
           + Y ++   +  I H +     +F+  FL
Sbjct: 472 YFYSHIGHHLKNIEHPER--MTLFRMVFL 498

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	560
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	98.86
3bcv_A	240	Putative glycosyltransferase protein; protein stru	98.77
3ckj_A	329	Putative uncharacterized protein; mycobacteria, un	98.58
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	98.49
3f1y_A	387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	98.4
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	98.34
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	98.28
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	98.18
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	98.12
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	98.08
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	98.01
4hg6_A	802	Cellulose synthase subunit A; membrane translocati	97.73
2bo4_A	397	Mannosylglycerate synthase; catalysis, glycosyltra	97.46
2wvl_A	391	Mannosyl-3-phosphoglycerate synthase; GT-A fold, t	97.03
2nxv_A	249	ATP synthase subunits region ORF 6; majastridin, A	97.02
2zu9_A	394	Mannosyl-3-phosphoglycerate synthase; GT-A fold, g	96.26
2fy7_A	287	Beta-1,4-galactosyltransferase 1; M339H mutant, AP	95.2
1fo8_A	343	Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl	94.28
2l82_A	162	Designed protein OR32; structural genomics, northe	82.67

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=98.86  E-value=1.8e-08  Score=98.34  Aligned_cols=104  Identities=13%  Similarity=0.089  Sum_probs=80.1

Q ss_pred             eEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCC--------CcchHHHHH
Q 037991          281 EMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWP--------WIKTQEAGF  350 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp--------~~~~Q~~a~  350 (560)
                      .|||++.++|++++|.++|++...+-.  -+|+|+|++|+|+|.++++++.+ ...|....-+        ...+...+.
T Consensus         2 ~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~~i~~i~~~~~~~~~~~~n~G~~~a~   80 (255)
T 1qg8_A            2 KVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN-DNRVRFYQSDISGVKERTEKTRYAALI   80 (255)
T ss_dssp             CEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG-STTEEEEECCCCSHHHHHSSCHHHHHH
T ss_pred             eEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh-cCCEEEEecccccccccccccCHHHHH
Confidence            589999999999999999999876544  38999999999999999999965 3335555444        345566677


Q ss_pred             HHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          351 AHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       351 ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      |.++..+  .++||+|+|.|.++.|..-..+.+.+++
T Consensus        81 N~gi~~a--~g~~i~~lD~Dd~~~~~~l~~~~~~~~~  115 (255)
T 1qg8_A           81 NQAIEMA--EGEYITYATDDNIYMPDRLLKMVRELDT  115 (255)
T ss_dssp             HHHHHHC--CCSEEEEEETTEEECTTHHHHHHHHHHH
T ss_pred             HHHHHHc--CCCEEEEeCCCCccChHHHHHHHHHHHh
Confidence            8887775  8899999999999976433344455544

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=98.77  E-value=2.9e-08  Score=95.71  Aligned_cols=105  Identities=13%  Similarity=0.141  Sum_probs=78.3

Q ss_pred             ceEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHc
Q 037991          280 HEMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRA  357 (560)
Q Consensus       280 ~~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~  357 (560)
                      ..++|++.++|++++|.++|++...+-.  -+++|+|++|+|+|.++++++.+...+|.... ....+...+.|.++..+
T Consensus         5 p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~-~~n~G~~~a~N~g~~~a   83 (240)
T 3bcv_A            5 PKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH-KKNAGLGMACNSGLDVA   83 (240)
T ss_dssp             CSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE-CCCCCHHHHHHHHHHHC
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE-CCCCChHHHHHHHHHHc
Confidence            3689999999999999999999876543  38999999999999999999865332344443 22344556778877775


Q ss_pred             cCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          358 RDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       358 ~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                        ..+||+|+|.|..+.|..-..+.+.+++
T Consensus        84 --~g~~i~~lD~Dd~~~~~~l~~l~~~~~~  111 (240)
T 3bcv_A           84 --TGEYVAFCDSDDYVDSDMYMTMYNVAQK  111 (240)
T ss_dssp             --CSSEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred             --CCCEEEEECCCCcCCHHHHHHHHHHHHh
Confidence              7899999999999876433444455544

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A

Probab=98.58  E-value=3.2e-07  Score=94.38  Aligned_cols=101  Identities=12%  Similarity=0.065  Sum_probs=76.0

Q ss_pred             CceEEEEEEecchHHHHHHHHHHHhhcC---ccEEEEEECCCCcCHHHHHHHhccCCceEEEE-----eCCCcchHHHHH
Q 037991          279 DHEMCICTMLRNQARFIREWVMYHARIG---VQRWFIYDNNSNDNIESVIDSLSSEKFNITRH-----VWPWIKTQEAGF  350 (560)
Q Consensus       279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~G---vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~-----~wp~~~~Q~~a~  350 (560)
                      ...+||++.+|||+++|.++|++...+-   ..+|+|+|++|+|+|.++++++   +..+...     ..+...+...+.
T Consensus        47 ~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~---~~~~~~~~~~~~~~~~n~G~~~a~  123 (329)
T 3ckj_A           47 GRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAA---GARVVSREQALPEVPIRPGKGEAL  123 (329)
T ss_dssp             TCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHT---TCEEEEHHHHCTTSCCCCSHHHHH
T ss_pred             CCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHh---hhhhccceeeeccCCCCCCHHHHH
Confidence            4579999999999999999999987652   4799999999999999999998   4332211     133344556677


Q ss_pred             HHHHHHccCCCcEEEEecCCce-eecCCcchHHHHHHh
Q 037991          351 AHCALRARDVCNWVGFIDVDEF-FRLPSGLILHDLIRN  387 (560)
Q Consensus       351 ndCl~r~~~~~dWVlflDaDEf-L~p~~~~sI~d~L~~  387 (560)
                      |.++..+  .++||+++|+|.. +.|.   .|..+++.
T Consensus       124 n~g~~~a--~gd~i~~lD~D~~~~~p~---~l~~l~~~  156 (329)
T 3ckj_A          124 WRSLAAS--RGDIVVFVDSDLINPHPM---FVPWLVGP  156 (329)
T ss_dssp             HHHHHHC--CCSEEEECCTTEESCCTT---HHHHHHHH
T ss_pred             HHHHHhC--CCCEEEEECCCCCCcChH---HHHHHHHH
Confidence            8887765  7899999999999 6654   34444443

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=98.49  E-value=7.1e-07  Score=99.18  Aligned_cols=121  Identities=13%  Similarity=0.087  Sum_probs=83.5

Q ss_pred             CceEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHH
Q 037991          279 DHEMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALR  356 (560)
Q Consensus       279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r  356 (560)
                      ...++|++.++|++++|.++|++...+-.  -+++|+|++|+|+|.++++++.+....+.... +...+...+.|.++..
T Consensus       374 ~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~n~G~~~a~n~g~~~  452 (625)
T 2z86_A          374 VPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QKNKGIGSASNTAVRL  452 (625)
T ss_dssp             SCSEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-ECCCCHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CCCCCHHHHHHHHHHh
Confidence            45799999999999999999999765533  38999999999999999999855432343333 2233455567888777


Q ss_pred             ccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEeeeeC
Q 037991          357 ARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFG  405 (560)
Q Consensus       357 ~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~~~fg  405 (560)
                      +  .++||+++|.|.++.|.   .|..+++.+..++.++.+.-....+.
T Consensus       453 a--~g~~i~~ld~D~~~~~~---~l~~~~~~~~~~~~~~~v~~~~~~~~  496 (625)
T 2z86_A          453 C--RGFYIGQLDSDDFLEPD---AVELCLDEFRKDLSLACVYTTNRNID  496 (625)
T ss_dssp             C--CSSEEEECCTTCEECTT---HHHHHHHHHHHCTTCSEEEEEEEEEC
T ss_pred             c--CCCEEEEECCCcccChh---HHHHHHHHHHhCCCeeEEEeeeEEEC
Confidence            5  78999999999998664   34444433322234555544333333

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*

Probab=98.40  E-value=7.2e-07  Score=94.48  Aligned_cols=104  Identities=13%  Similarity=0.064  Sum_probs=76.2

Q ss_pred             CceEEEEEEecchHHHHHHHHHHHhhc-----CccEEEEEECCCCcCHHHHHHHhccCCceEEEEe-----CCCcchHHH
Q 037991          279 DHEMCICTMLRNQARFIREWVMYHARI-----GVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHV-----WPWIKTQEA  348 (560)
Q Consensus       279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~-----Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~-----wp~~~~Q~~  348 (560)
                      ...++|++.+|||++.|.++|+....+     ...+|+|+|++|+|+|.++++++   +..+....     .+...+...
T Consensus        93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~---~~~v~~~~~~~i~~~~n~G~g~  169 (387)
T 3f1y_A           93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASH---GAEVYSENELMSGYGDAHGKGD  169 (387)
T ss_dssp             TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHT---TCEEEEGGGTTGGGCSCCSHHH
T ss_pred             CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHh---CchhcccceeEecCCccCCHHH
Confidence            457999999999999999999987542     35799999999999999999999   43332221     233344555


Q ss_pred             HHHHHHHHccCCCcEEEEecCCce-eecCCcchHHHHHHh
Q 037991          349 GFAHCALRARDVCNWVGFIDVDEF-FRLPSGLILHDLIRN  387 (560)
Q Consensus       349 a~ndCl~r~~~~~dWVlflDaDEf-L~p~~~~sI~d~L~~  387 (560)
                      ++|.++..+  .++||+++|+|.. +.|..-..+.+.+.+
T Consensus       170 A~n~G~~~A--~gd~i~~lDaD~~~~~p~~L~~l~~~l~~  207 (387)
T 3f1y_A          170 AMWRALSVT--RGDLVLYIDADTRDFRPQLAYGVLGPVLE  207 (387)
T ss_dssp             HHHHHTTTC--CSSEEEECCTTCSSCCTHHHHTTHHHHHH
T ss_pred             HHHHHHHhc--CCCEEEEEcCCCCcCCHHHHHHHHHHHHH
Confidence            677776654  7899999999999 666433444444433

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=98.34  E-value=3.3e-06  Score=90.68  Aligned_cols=108  Identities=10%  Similarity=-0.028  Sum_probs=80.9

Q ss_pred             CCceEEEEEEecchH-HHHHHHHHHHhhcCc----cEEEEEECCCCcC-HHHHHHHhccCCc-eEEEEeCCCcchHHHHH
Q 037991          278 KDHEMCICTMLRNQA-RFIREWVMYHARIGV----QRWFIYDNNSNDN-IESVIDSLSSEKF-NITRHVWPWIKTQEAGF  350 (560)
Q Consensus       278 ~~~~lsVc~i~~NEa-~~L~EwIe~h~~~Gv----d~f~IyDn~StD~-T~eIL~~y~~~G~-~Vt~~~wp~~~~Q~~a~  350 (560)
                      ....+||++.++||+ ..|.++|++...+-.    .+|+|+|++|+|+ |.+++++|.+... .|....-+...+...+.
T Consensus        27 ~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~~~a~  106 (472)
T 1xhb_A           27 NLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRAR  106 (472)
T ss_dssp             CCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHH
T ss_pred             CCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCChHHHH
Confidence            345799999999999 999999998765432    3899999999995 9999999865322 35555555444556677


Q ss_pred             HHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          351 AHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       351 ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      |.++..+  .++||+|+|+|..+.|..-..+.+.+++
T Consensus       107 N~g~~~A--~gd~i~flD~D~~~~p~~L~~ll~~~~~  141 (472)
T 1xhb_A          107 LKGAAVS--RGQVITFLDAHCECTAGWLEPLLARIKH  141 (472)
T ss_dssp             HHHHHHC--CSSEEEEEESSEEECTTCHHHHHHHHHH
T ss_pred             HHHHHhc--cCCeEEEECCCeEeCccHHHHHHHHHHh
Confidence            7777775  7999999999999876544455555554

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=98.28  E-value=3.8e-06  Score=93.04  Aligned_cols=107  Identities=11%  Similarity=-0.086  Sum_probs=82.5

Q ss_pred             CceEEEEEEecchH-HHHHHHHHHHhhcCc-c---EEEEEECCCCcCH-HHHHHHhccCCceEEEEeCCCcchHHHHHHH
Q 037991          279 DHEMCICTMLRNQA-RFIREWVMYHARIGV-Q---RWFIYDNNSNDNI-ESVIDSLSSEKFNITRHVWPWIKTQEAGFAH  352 (560)
Q Consensus       279 ~~~lsVc~i~~NEa-~~L~EwIe~h~~~Gv-d---~f~IyDn~StD~T-~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~nd  352 (560)
                      ...+||++.++||+ ..|.++|++...+-. +   +|+|+|++|+|+| .++|++|.+....|....-+...+-..+.|.
T Consensus       111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~~~A~N~  190 (570)
T 2d7i_A          111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTRML  190 (570)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCHHHHHHH
T ss_pred             CCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCHHHHHHH
Confidence            35799999999998 999999998765432 2   8999999999999 9999998654334655555544455567777


Q ss_pred             HHHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          353 CALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       353 Cl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      ++..+  ..+||+|+|+|..+.+..-..+.+.+++
T Consensus       191 G~~~A--~gd~i~fLD~D~~~~p~~L~~ll~~l~~  223 (570)
T 2d7i_A          191 GASVA--TGDVITFLDSHCEANVNWLPPLLDRIAR  223 (570)
T ss_dssp             HHHHC--CSSEEEECCSSEEECTTCSHHHHHHHHH
T ss_pred             HHHhc--CCCEEEEEcCCccccccHHHHHHHHHHh
Confidence            77775  7899999999999977555556666655

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=98.18  E-value=8.1e-06  Score=92.08  Aligned_cols=107  Identities=13%  Similarity=0.066  Sum_probs=75.6

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHHhhc-----CccEEEEEECCCCc-----CHHHHHHHhccCCceEEEEeCCCcchHH
Q 037991          278 KDHEMCICTMLRNQARFIREWVMYHARI-----GVQRWFIYDNNSND-----NIESVIDSLSSEKFNITRHVWPWIKTQE  347 (560)
Q Consensus       278 ~~~~lsVc~i~~NEa~~L~EwIe~h~~~-----Gvd~f~IyDn~StD-----~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~  347 (560)
                      .+..|||++.++|+++.|.+||++...+     ..++|+|+||+|+|     .+.++++.+   +..|..+.-+ ..+-.
T Consensus       178 ~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~---~~~I~vI~~~-N~G~a  253 (657)
T 4fix_A          178 GTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARL---GSRLSIHDQP-NLGGS  253 (657)
T ss_dssp             SCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHH---GGGEEEEECC-CCHHH
T ss_pred             CCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhc---CCCEEEEECC-CCCHH
Confidence            3457999999999999999999987643     35699999999998     345566554   3345555444 44445


Q ss_pred             HHHHHHHHHccC--CCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          348 AGFAHCALRARD--VCNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       348 ~a~ndCl~r~~~--~~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                      .++|.++..+..  .++||+++|.|-.+.|..-..+.++++..
T Consensus       254 ~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~  296 (657)
T 4fix_A          254 GGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFA  296 (657)
T ss_dssp             HHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHB
T ss_pred             HHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhC
Confidence            567777666532  68999999999998864334455555543

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=98.12  E-value=1.4e-05  Score=88.82  Aligned_cols=106  Identities=17%  Similarity=0.030  Sum_probs=77.5

Q ss_pred             CceEEEEEEecchHHHHHHHHHHHhhcC---ccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcc-hHHHHHHHHH
Q 037991          279 DHEMCICTMLRNQARFIREWVMYHARIG---VQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIK-TQEAGFAHCA  354 (560)
Q Consensus       279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~G---vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~-~Q~~a~ndCl  354 (560)
                      ...++|++.++||+..|.++|++...+-   -.+|+|+|++|+|+|.++++++.+.. .+....-+..+ +...+.|.++
T Consensus        92 ~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~-~i~~i~~~~~~~g~~~a~N~g~  170 (625)
T 2z86_A           92 IDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLL-NIKYVRQKDYGYQLCAVRNLGL  170 (625)
T ss_dssp             CCCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTS-CEEEEEECCCSCCHHHHHHHHH
T ss_pred             CCcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcC-CeEEEEeCCCCcchhHHHHHHH
Confidence            3579999999999999999999987652   46899999999999999999986532 24333334332 3445667777


Q ss_pred             HHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          355 LRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       355 ~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      ..+  .++||+++|+|..+.+..-..+.+.+..
T Consensus       171 ~~a--~g~~v~~lD~D~~~~~~~l~~~~~~~~~  201 (625)
T 2z86_A          171 RAA--KYNYVAILDCDMAPNPLWVQSYMELLAV  201 (625)
T ss_dssp             HHC--CSSEEEEECTTEEECTTHHHHHHHHHHH
T ss_pred             HhC--CcCEEEEECCCCCCCHHHHHHHHHHHhc
Confidence            764  8899999999999965432334444443

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=98.08  E-value=2.4e-05  Score=84.78  Aligned_cols=103  Identities=13%  Similarity=0.011  Sum_probs=75.4

Q ss_pred             CceEEEEEEecchHH-HHHHHHHHHhhcCc-c---EEEEEECCCCcCHHH-HHHHhccCCceEEEEeCCCcchHHHHHHH
Q 037991          279 DHEMCICTMLRNQAR-FIREWVMYHARIGV-Q---RWFIYDNNSNDNIES-VIDSLSSEKFNITRHVWPWIKTQEAGFAH  352 (560)
Q Consensus       279 ~~~lsVc~i~~NEa~-~L~EwIe~h~~~Gv-d---~f~IyDn~StD~T~e-IL~~y~~~G~~Vt~~~wp~~~~Q~~a~nd  352 (560)
                      ...+||++.++||+. .|.++|++...+-. .   +|+|+|++|+|+|.+ +++.+    ..|....-+...+...+.|.
T Consensus        65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~----~~v~vi~~~~n~G~~~A~N~  140 (501)
T 2ffu_A           65 LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKI----EKVRVLRNDRREGLMRSRVR  140 (501)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGB----TTEEEEECSSCCHHHHHHHH
T ss_pred             CCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcC----CCEEEEECCCCcCHHHHHHH
Confidence            457999999999987 99999998765432 2   899999999999954 33222    23555555555566777888


Q ss_pred             HHHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          353 CALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       353 Cl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      ++..+  ..+||+|+|+|..+.|..-..+.+.+++
T Consensus       141 G~~~A--~gd~i~flD~D~~~~p~~L~~ll~~~~~  173 (501)
T 2ffu_A          141 GADAA--QAKVLTFLDSHCECNEHWLEPLLERVAE  173 (501)
T ss_dssp             HHHHC--CSSEEEECCSSEEECTTCHHHHHHHHHH
T ss_pred             HHHhc--CCCEEEEECCCcccCccHHHHHHHHHHh
Confidence            87775  7899999999999876544455555544

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=98.01  E-value=7.5e-07  Score=101.30  Aligned_cols=104  Identities=12%  Similarity=0.062  Sum_probs=0.0

Q ss_pred             eEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccC-CceEEEEeCCCcchHHHHHHHHHHHc
Q 037991          281 EMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSE-KFNITRHVWPWIKTQEAGFAHCALRA  357 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~-G~~Vt~~~wp~~~~Q~~a~ndCl~r~  357 (560)
                      .|||++.++|++++|.++|++...+-.  -+|+|+|++|+|+|.++++++.+. +..|....-+...+...+.|.++..+
T Consensus         3 ~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A   82 (729)
T 3l7i_A            3 KLTIIVTYYNAEEYITGCLESIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEV   82 (729)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhc
Confidence            589999999999999999998765533  379999999999999999999754 22343333232333445667777664


Q ss_pred             cCCCcEEEEecCCceeecCCcchHHHHHH
Q 037991          358 RDVCNWVGFIDVDEFFRLPSGLILHDLIR  386 (560)
Q Consensus       358 ~~~~dWVlflDaDEfL~p~~~~sI~d~L~  386 (560)
                        .++||+|+|.|..+.|..-..+.+.+.
T Consensus        83 --~gdyI~flD~Dd~~~p~~l~~l~~~l~  109 (729)
T 3l7i_A           83 --ETPYFMFLDADDELASYAITFYLEKFN  109 (729)
T ss_dssp             -----------------------------
T ss_pred             --cCCEEEEECCCCCCChhHHHHHHHHhc
Confidence              789999999999997643344444444

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}

Probab=97.73  E-value=8.3e-05  Score=85.66  Aligned_cols=114  Identities=10%  Similarity=-0.000  Sum_probs=75.3

Q ss_pred             ceEEEEEEecchHHHH-HHHHHHHhhcCc-c---EEEEEECCCCcCHH---------------HHHHHhcc-CCceEEEE
Q 037991          280 HEMCICTMLRNQARFI-REWVMYHARIGV-Q---RWFIYDNNSNDNIE---------------SVIDSLSS-EKFNITRH  338 (560)
Q Consensus       280 ~~lsVc~i~~NEa~~L-~EwIe~h~~~Gv-d---~f~IyDn~StD~T~---------------eIL~~y~~-~G~~Vt~~  338 (560)
                      ..++|++.+|||++.+ .++|++...+-. +   +|+|+|+||+|+|.               +.++++.+ .+..+  .
T Consensus       140 P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~--i  217 (802)
T 4hg6_A          140 PTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVY--S  217 (802)
T ss_dssp             CCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEE--E
T ss_pred             CcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEE--E
Confidence            4789999999999766 889998765543 2   79999999999993               23443322 24322  2


Q ss_pred             eCCC-cchHHHHHHHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEE
Q 037991          339 VWPW-IKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRIS  400 (560)
Q Consensus       339 ~wp~-~~~Q~~a~ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~  400 (560)
                      .-+. .++...+.|.++..+  ++|||+++|+|-.+.|.   .+..+++....+++++.+.-+
T Consensus       218 ~~~~~~~GKa~alN~gl~~a--~gd~Il~lDaD~~~~pd---~L~~lv~~~~~dp~v~~V~~~  275 (802)
T 4hg6_A          218 TRERNEHAKAGNMSAALERL--KGELVVVFDADHVPSRD---FLARTVGYFVEDPDLFLVQTP  275 (802)
T ss_dssp             ECSSCCSHHHHHHHHHHHHC--CCSEEEECCTTEEECTT---HHHHHHHHHHHSSSCCEEECC
T ss_pred             EecCCCCcchHHHHHHHHhc--CCCEEEEECCCCCcChH---HHHHHHHHHhcCCCeEEEecc
Confidence            2222 234455778887774  88999999999998653   455555444223456665543

>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*

Probab=97.46  E-value=0.00018  Score=76.33  Aligned_cols=100  Identities=7%  Similarity=-0.020  Sum_probs=59.2

Q ss_pred             EEEEEecchHHHHHHHHHHHh---hcCccEEEEEECCCCcCHHHHHH----Hhc-cCCceEEEEeCC--C--cchHHHHH
Q 037991          283 CICTMLRNQARFIREWVMYHA---RIGVQRWFIYDNNSNDNIESVID----SLS-SEKFNITRHVWP--W--IKTQEAGF  350 (560)
Q Consensus       283 sVc~i~~NEa~~L~EwIe~h~---~~Gvd~f~IyDn~StD~T~eIL~----~y~-~~G~~Vt~~~wp--~--~~~Q~~a~  350 (560)
                      |++++.+||+ .|.+.++...   ...--+|+|+|+||+|+|.++++    ++. +.|..|....-+  +  ..++-.++
T Consensus         2 slVIiP~~eE-~I~~vl~~l~~~~~~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al   80 (397)
T 2bo4_A            2 SLVVFPFKHE-HPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGM   80 (397)
T ss_dssp             CEEEEECCSS-CHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHH
T ss_pred             cEEEEeCCcc-CHHHHHHHHHHhccCCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHH
Confidence            3444444443 3666665432   12234799999999999999999    332 236554333212  2  33445555


Q ss_pred             HHHH----HHccCCCcEEEEecCCce-eecCCcchHHHHHHhc
Q 037991          351 AHCA----LRARDVCNWVGFIDVDEF-FRLPSGLILHDLIRNL  388 (560)
Q Consensus       351 ndCl----~r~~~~~dWVlflDaDEf-L~p~~~~sI~d~L~~~  388 (560)
                      +..+    ..  ..+|||+++|+|=. ..|   ..|.++++..
T Consensus        81 ~~G~~~Al~~--a~gd~vv~mDADlq~~~P---~~i~~Ll~~l  118 (397)
T 2bo4_A           81 NTALRYFLEE--TQWERIHFYDADITSFGP---DWITKAEEAA  118 (397)
T ss_dssp             HHHHHHHHHH--CCCSEEEECCTTCSSCCH---HHHHHHHHHH
T ss_pred             HHHHHHHHHh--CCCCEEEEEcCCCCCCCH---HHHHHHHHHH
Confidence            5555    34  48899999999954 333   2355555543

>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*

Probab=97.03  E-value=0.0017  Score=67.47  Aligned_cols=123  Identities=15%  Similarity=0.118  Sum_probs=69.2

Q ss_pred             ceEEEEEEecchHHHHHHHHHHHhhcCccEEEEEECCCCcCH---HHHHHHhcc-CCceEEEEeCCCcchHHHHHHH---
Q 037991          280 HEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNI---ESVIDSLSS-EKFNITRHVWPWIKTQEAGFAH---  352 (560)
Q Consensus       280 ~~lsVc~i~~NEa~~L~EwIe~h~~~Gvd~f~IyDn~StD~T---~eIL~~y~~-~G~~Vt~~~wp~~~~Q~~a~nd---  352 (560)
                      ..++|++-+|||+..|.+=+....... -+|+++||+|+|++   .+++++|.+ ..-++...+-. ...-..|++.   
T Consensus        53 ~klSIVVPvYNEe~~lLesVl~qi~~d-~eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viHQk-n~gls~Ar~~~G~  130 (391)
T 2wvl_A           53 EQTAIVVPTRNERLKLLEGVLSGIPHE-ALILVASNSSPDRFQMERDLLEEFAHLTERPALIFHQK-DPALAEALRAGGY  130 (391)
T ss_dssp             TTEEEEEEESSCCHHHHHHHHHTSCTT-SEEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEETT-CHHHHHHHHHTTC
T ss_pred             hceEEEEeccCcHHHHHHHHHhcCCCC-ceEEEEECCCCCChHhHHHHHHHHHhhcccceEEEecc-ChHHHHHHHhcCc
Confidence            478999999999987644443211111 37999999999999   578889964 12223222211 1111111111   


Q ss_pred             --------------------HHHHc-cCCCcEEEEecCCceeecCCcchHHHHHHhc--CCCCCEeEEEEEeeeeC
Q 037991          353 --------------------CALRA-RDVCNWVGFIDVDEFFRLPSGLILHDLIRNL--SGDGSVAELRISCHSFG  405 (560)
Q Consensus       353 --------------------Cl~r~-~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~--~~~~~v~ai~~~~~~fg  405 (560)
                                          .+..+ ....+||.|+|+|.++...-......+=+.+  ... ..+.+++.|+...
T Consensus       131 ~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a~s-~~~MVRI~wR~kP  205 (391)
T 2wvl_A          131 PHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMAKT-PFAMVRILWRYKP  205 (391)
T ss_dssp             CTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHCCS-SEEEEEEECCCCC
T ss_pred             chhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHHHHHhcccCC-CcceEEEecccCc
Confidence                                11111 1378999999999999542222222222211  122 3577888887754

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*

Probab=97.02  E-value=0.0012  Score=64.73  Aligned_cols=84  Identities=13%  Similarity=0.006  Sum_probs=56.7

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHHhh----cCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHH
Q 037991          278 KDHEMCICTMLRNQARFIREWVMYHAR----IGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHC  353 (560)
Q Consensus       278 ~~~~lsVc~i~~NEa~~L~EwIe~h~~----~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndC  353 (560)
                      ..+.+||+ +++|+++.|.+||++...    +...+++|+||+|+|.          .|          ..   .+.|..
T Consensus        14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~----------~g----------~a---~a~N~G   69 (249)
T 2nxv_A           14 STLMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ----------FH----------GF---SWHKQM   69 (249)
T ss_dssp             CCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS----------CC----------TT---THHHHH
T ss_pred             CcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc----------cc----------HH---HHHHHH
Confidence            34568875 459999999999995431    2225899999999872          12          12   234555


Q ss_pred             HHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          354 ALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       354 l~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      +..+  ..+|++|+|.|-++.+.--..+.+.+++
T Consensus        70 i~~A--~g~yl~fln~D~~~~~~~l~~l~~~~~~  101 (249)
T 2nxv_A           70 LPRC--KGRYVIFCHEDVELVDRGYDDLVAAIEA  101 (249)
T ss_dssp             GGGC--CSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred             HHhc--CCCEEEEECCCcccCccHHHHHHHHHHh
Confidence            5554  7899999999999854333445555544

>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*

Probab=96.26  E-value=0.0088  Score=63.17  Aligned_cols=89  Identities=17%  Similarity=0.185  Sum_probs=56.6

Q ss_pred             eEEEEEEecchHHHH-HHHHHHHhhcCccEEEEEECCCCcCH------HHHHHHhcc---CCceEEEEeCC---------
Q 037991          281 EMCICTMLRNQARFI-REWVMYHARIGVQRWFIYDNNSNDNI------ESVIDSLSS---EKFNITRHVWP---------  341 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L-~EwIe~h~~~Gvd~f~IyDn~StD~T------~eIL~~y~~---~G~~Vt~~~wp---------  341 (560)
                      .+||++-++||+..+ .+-+.-.  -...+|+++|++|+|+|      .++++++.+   .+..|....-|         
T Consensus        52 ~iSVVIP~yNEE~~lI~~vL~~i--~~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~~~~Vl~~~~p~v~~~~~~~  129 (394)
T 2zu9_A           52 KMAVIVPMKNEKLHLVDGVLKAI--PHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSKIIMIHQKDPGLAKAFKEV  129 (394)
T ss_dssp             TEEEEEEESSCCHHHHHHHHHHS--CTTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCCCEEEEETTCHHHHHHHHHH
T ss_pred             CEEEEEecCcccHHHHHHHHHcC--CCCcEEEEEECcCcccccchhhHHHHHHHHhhccccceEEEecCCcchhHHhhhc
Confidence            689999999999765 3333321  12468999999997776      677776532   35433332221         


Q ss_pred             -----------CcchHHHHHHHHHHHc-cCCCcEEEEecCCc
Q 037991          342 -----------WIKTQEAGFAHCALRA-RDVCNWVGFIDVDE  371 (560)
Q Consensus       342 -----------~~~~Q~~a~ndCl~r~-~~~~dWVlflDaDE  371 (560)
                                 ...++..++..|+..+ ....+||+++|+|=
T Consensus       130 g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl  171 (394)
T 2zu9_A          130 GYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN  171 (394)
T ss_dssp             TCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB
T ss_pred             cccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC
Confidence                       1134555555566554 23789999999999

>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...

Probab=95.20  E-value=0.057  Score=54.45  Aligned_cols=74  Identities=18%  Similarity=0.218  Sum_probs=50.9

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHHh----hcCc-cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHH
Q 037991          278 KDHEMCICTMLRNQARFIREWVMYHA----RIGV-QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAH  352 (560)
Q Consensus       278 ~~~~lsVc~i~~NEa~~L~EwIe~h~----~~Gv-d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~nd  352 (560)
                      ....+||++.++|+++.|.++|++..    .... -+|+|+|+ ++|+..                      ....+.|.
T Consensus        63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~~EIiVVdd-s~d~~f----------------------~~a~a~N~  119 (287)
T 2fy7_A           63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQ-AGDTIF----------------------NRAKLLNV  119 (287)
T ss_dssp             CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-CSSSCC----------------------CHHHHHHH
T ss_pred             cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEe-CCCCcc----------------------chhhhhhh
Confidence            34689999999999999999999875    2222 46888887 333210                      01112233


Q ss_pred             HH----HHccCCCcEEEEecCCceeecC
Q 037991          353 CA----LRARDVCNWVGFIDVDEFFRLP  376 (560)
Q Consensus       353 Cl----~r~~~~~dWVlflDaDEfL~p~  376 (560)
                      .+    ..  ..++|++|+|+|-.+.+.
T Consensus       120 G~~~al~~--A~gd~i~flD~D~i~~~d  145 (287)
T 2fy7_A          120 GFQEALKD--YDYTCFVFSDVDLIPMND  145 (287)
T ss_dssp             HHHHHHHH--SCCCEEEEECTTEEESBT
T ss_pred             HHHHHHHh--CCCCEEEEECCCcccCCC
Confidence            32    33  589999999999998875

>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*

Probab=94.28  E-value=0.077  Score=55.07  Aligned_cols=114  Identities=12%  Similarity=-0.001  Sum_probs=72.3

Q ss_pred             eEEEEEEecchHHHHHHHHHHHhhcC--c--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCc----------chH
Q 037991          281 EMCICTMLRNQARFIREWVMYHARIG--V--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWI----------KTQ  346 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L~EwIe~h~~~G--v--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~----------~~Q  346 (560)
                      .++|+++++|-.+ |..+|+..+.+-  .  ..++|.|+++.+.+.++++.|..   .|+....+..          +.+
T Consensus         3 ~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~---~I~~~~~~d~~~~~~~~~N~g~~   78 (343)
T 1fo8_A            3 VIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGS---AVTHIRQPDLSNIAVQPDHRKFQ   78 (343)
T ss_dssp             CCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGG---GSEEEECSCCCCCCCCTTCGGGH
T ss_pred             cccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCC---ceEEEEcCCccccccchhhcCcc
Confidence            3578888999998 999999876542  3  47999999999999999999842   2333211211          110


Q ss_pred             -----HHHHHHHHHHc--cCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEE
Q 037991          347 -----EAGFAHCALRA--RDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELR  398 (560)
Q Consensus       347 -----~~a~ndCl~r~--~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~  398 (560)
                           ...+..++.+.  ...++.++++|-|=.+.|.--.-..+++..++.++++.+++
T Consensus        79 ~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~IS  137 (343)
T 1fo8_A           79 GYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVS  137 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEE
T ss_pred             cchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEe
Confidence                 01223343332  23799999999999988753333444444333344666554

>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}

Probab=82.67  E-value=3.5  Score=35.58  Aligned_cols=52  Identities=13%  Similarity=0.399  Sum_probs=42.9

Q ss_pred             EEecchHHHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEE
Q 037991          286 TMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITR  337 (560)
Q Consensus       286 ~i~~NEa~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~  337 (560)
                      +.+-+...||.+||+-.+.-|++-|++|.|..+|.-.+--+++...|..|..
T Consensus        83 ivttddkewikdfieeakergvevfvvynnkdddrrkeaqqefrsdgvdvrt  134 (162)
T 2l82_A           83 IVTTDDKEWIKDFIEEAKERGVEVFVVYNNKDDDRRKEAQQEFRSDGVDVRT  134 (162)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHCCSSCEEEE
T ss_pred             EEecCcHHHHHHHHHHHHhcCcEEEEEecCCCchhHHHHHHHhhhcCceeee
Confidence            4556888899999999888999999999987777777777888888876643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	560
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	98.66
d1omza_	265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	98.58
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	98.29
d2bo4a1	381	Mannosylglycerate synthase, MGS {Rhodothermus mari	94.05

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=98.66  E-value=8.3e-08  Score=91.47  Aligned_cols=104  Identities=13%  Similarity=0.117  Sum_probs=77.6

Q ss_pred             eEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCC--------cchHHHHH
Q 037991          281 EMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPW--------IKTQEAGF  350 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~--------~~~Q~~a~  350 (560)
                      .|||++.++|++++|.++|++...+=.  -+++|+|++|+|+|.++|+++.+.. ++.....+.        ..+...+.
T Consensus         2 ~vSiiip~yN~~~~l~~~l~Si~~Qt~~~~eiivvdd~S~d~t~~~l~~~~~~~-~i~~~~~~~~~~~~~~~~~g~~~a~   80 (255)
T d1qg8a_           2 KVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDN-RVRFYQSDISGVKERTEKTRYAALI   80 (255)
T ss_dssp             CEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGGST-TEEEEECCCCSHHHHHSSCHHHHHH
T ss_pred             EEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHhhhhc-ccccccccccccccccccchhcccc
Confidence            589999999999999999999765533  3899999999999999999997543 354444332        23445567


Q ss_pred             HHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991          351 AHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN  387 (560)
Q Consensus       351 ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~  387 (560)
                      |.++..+  +++|++++|+|..+.|..-..+.+.+..
T Consensus        81 N~gi~~a--~g~~i~~lD~Dd~~~p~~l~~~~~~~~~  115 (255)
T d1qg8a_          81 NQAIEMA--EGEYITYATDDNIYMPDRLLKMVRELDT  115 (255)
T ss_dssp             HHHHHHC--CCSEEEEEETTEEECTTHHHHHHHHHHH
T ss_pred             ccccccc--ccccccccccccccccchHHHHHHHHHh
Confidence            8887775  8899999999999986422334444443

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.58  E-value=1.9e-08  Score=92.75  Aligned_cols=102  Identities=10%  Similarity=-0.013  Sum_probs=69.1

Q ss_pred             eEEEEEEecchHHHHHHHHHHHhhcC-ccEEEEEECCCCcCHHH-HHHHhccCCceE-EEEeCCCcchHHHHHHHHHHHc
Q 037991          281 EMCICTMLRNQARFIREWVMYHARIG-VQRWFIYDNNSNDNIES-VIDSLSSEKFNI-TRHVWPWIKTQEAGFAHCALRA  357 (560)
Q Consensus       281 ~lsVc~i~~NEa~~L~EwIe~h~~~G-vd~f~IyDn~StD~T~e-IL~~y~~~G~~V-t~~~wp~~~~Q~~a~ndCl~r~  357 (560)
                      +++|++.++|+++.|.++|++...+. .++++|+|++|+|++.+ +++.+.+....+ ....+.+...   +.|.++.. 
T Consensus         4 ~~tvii~tyn~~~~l~~~l~sl~~q~~~~~~iiV~d~~sd~~~~~i~~~~~~~~~~~~~~~~~~g~~~---a~n~~~~~-   79 (265)
T d1omza_           4 SFTLIMQTYNRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMR---NRLQVFPE-   79 (265)
T ss_dssp             CEEEEEEESSCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGG---GGGSCCTT-
T ss_pred             cEEEEEEcCCCHHHHHHHHHHHHcCCCcCeEEEEECCCCCccHHHHHHHhcccceEEEEecCCCCchh---hhhhhHHh-
Confidence            57899999999999999999987664 47777887777766555 555554333322 2333433333   33555555 


Q ss_pred             cCCCcEEEEecCCceeecCCcchHHHHHHhcCC
Q 037991          358 RDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSG  390 (560)
Q Consensus       358 ~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~  390 (560)
                       ...|||+++|+|+.+.+   +.|..+++....
T Consensus        80 -a~ge~i~~lD~D~~~~~---~~l~~l~~~~~~  108 (265)
T d1omza_          80 -VETNAVLMVDDDTLISA---QDLVFAFSIWQQ  108 (265)
T ss_dssp             -CCSSEEEEECTTEEECH---HHHHHHHHHHTT
T ss_pred             -CCcCEEEEeCcccCCCH---HHHHHHHHHHHh
Confidence             48899999999999876   345556655544

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=2.8e-06  Score=83.92  Aligned_cols=107  Identities=11%  Similarity=-0.007  Sum_probs=76.6

Q ss_pred             ceEEEEEEecchH-HHHHHHHHHHhhcC----ccEEEEEECCCCcCHH-HHHHHhccC-CceEEEEeCCCcchHHHHHHH
Q 037991          280 HEMCICTMLRNQA-RFIREWVMYHARIG----VQRWFIYDNNSNDNIE-SVIDSLSSE-KFNITRHVWPWIKTQEAGFAH  352 (560)
Q Consensus       280 ~~lsVc~i~~NEa-~~L~EwIe~h~~~G----vd~f~IyDn~StD~T~-eIL~~y~~~-G~~Vt~~~wp~~~~Q~~a~nd  352 (560)
                      ..+||++.++||+ ..|.++|++...+=    ..+|+|+|++|+|++. ++++++.+. ...|....-+...+...+.|.
T Consensus        22 P~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n~G~~~a~N~  101 (328)
T d1xhba2          22 PTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLK  101 (328)
T ss_dssp             CCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHHHH
T ss_pred             CCEEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEecccccchHHHHH
Confidence            4799999999986 67999999876542    2489999999999874 677776443 223555544544455556788


Q ss_pred             HHHHccCCCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991          353 CALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNL  388 (560)
Q Consensus       353 Cl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~  388 (560)
                      ++..+  .++||+|+|.|-.+.|..-..+.+.+.+.
T Consensus       102 Gi~~a--~gd~i~flD~D~~~~p~~l~~l~~~~~~~  135 (328)
T d1xhba2         102 GAAVS--RGQVITFLDAHCECTAGWLEPLLARIKHD  135 (328)
T ss_dssp             HHHHC--CSSEEEEEESSEEECTTCHHHHHHHHHHC
T ss_pred             HHHhh--hcceeeecCcccccChhHHHHHHHHHhcC
Confidence            77774  89999999999998765434455555543

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: MGS-like
domain: Mannosylglycerate synthase, MGS
species: Rhodothermus marinus [TaxId: 29549]

Probab=94.05  E-value=0.062  Score=54.03  Aligned_cols=86  Identities=10%  Similarity=0.051  Sum_probs=48.5

Q ss_pred             EEEEecchHHHH-HHHHHHHhh-cCccEEEEEECCCCcCHHHHHHHhcc----CCceEEEEe-------CCCcc-hHHHH
Q 037991          284 ICTMLRNQARFI-REWVMYHAR-IGVQRWFIYDNNSNDNIESVIDSLSS----EKFNITRHV-------WPWIK-TQEAG  349 (560)
Q Consensus       284 Vc~i~~NEa~~L-~EwIe~h~~-~Gvd~f~IyDn~StD~T~eIL~~y~~----~G~~Vt~~~-------wp~~~-~Q~~a  349 (560)
                      ||+-++||+..+ ...++-... --.++|+|.|++|+|.+.++.+.+.+    .+..+....       +++.+ +...+
T Consensus         3 VVIP~~NEe~~il~~~v~~~a~~P~~~eIvVvDdsSdDtt~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GKG~g~~~A   82 (381)
T d2bo4a1           3 VVFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTA   82 (381)
T ss_dssp             EEEECCSSCHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHH
T ss_pred             EEEEcCCCcHHHHHHHHHHHHhCCCeeEEEEEcCCCCCcHHHHHHHhhhhhccccccchhhhhcccccccCCCcHHHHHH
Confidence            456689998533 333322221 24688999888888888887766532    122232221       12211 22223


Q ss_pred             HHHHHHHccCCCcEEEEecCCc
Q 037991          350 FAHCALRARDVCNWVGFIDVDE  371 (560)
Q Consensus       350 ~ndCl~r~~~~~dWVlflDaDE  371 (560)
                      +...+..  ..++.++|+|+|=
T Consensus        83 ~~~g~~~--a~gd~lvflDADl  102 (381)
T d2bo4a1          83 LRYFLEE--TQWERIHFYDADI  102 (381)
T ss_dssp             HHHHHHH--CCCSEEEECCTTC
T ss_pred             HHHHHHh--CCCCEEEEEcCCc
Confidence            3333333  5899999999994