Citrus Sinensis ID: 038030

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200--
MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQAEANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIKVSTAIELGVLDAFSPPTTAGGGSLDIVISESGWPAAGGDGALTNVDNAKTYNNNLIQHVKQGSPKKPRPIETYIFAIFDENG
ccccccccHHHHHHHHHHccccEEEEccccHHHHHHHcccccEEEEccccHHHHHHHccHHHHHHHHHHcccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEEcccccccccccccccccccccEEcccccccccccccccHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccc
ccccccccHHHHHHHHHHHcccEEEEccccHHHHHHccccccEEEEEccHHHHHHHHHcHHHHHHHHHHHccccccccEEEEEEEEEcccHHcHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccEEccccccHHccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHcccEccccEccccEEEcccEcccc
mvgdnlpskpdVIALYNqnnirrmrlydpnreALEAfrgsnfevmpglpnddlrriSSTQAEANTWVQENVQNFVNNVKFKCIavgneakpgddfaqyLVPTMRNIqnaidganlgsqiKVSTAIELgvldafsppttagggsldivisesgwpaaggdgaltnvdnaktyNNNLIQHvkqgspkkprpieTYIFAIFDENG
mvgdnlpskpdVIALynqnnirrmrlYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQAEANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIKVSTAIELGVLDAFSPPTTAGGGSLDIVISESGWPAAGGDGALTNVDNAKTYNNNLIQhvkqgspkkprpiETYIFAIFDENG
MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQAEANTWvqenvqnfvnnvkfkCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIKVSTAIELGVLDAFSPPTTAGGGSLDIVISESGWPAAGGDGALTNVDNAKTYNNNLIQHVKQGSPKKPRPIETYIFAIFDENG
***********VIALYNQNNIRRMRLYDPNREALEAFRG**F*******************EANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIKVSTAIELGVLDAFSPPTTAGGGSLDIVISESGWPAAGGDGALTNVDNAKTYNNNLIQH***********IETYIFAIF****
MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQAEANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIKVSTAIELGVLDAFSPPTTAGGGSLDIVISESGWPAAGGDGALTNVDNAKTYNNNLIQHVKQGSPKKPRPIETYIFAIFDENG
MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQAEANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIKVSTAIELGVLDAFSPPTTAGGGSLDIVISESGWPAAGGDGALTNVDNAKTYNNNLIQHVKQGSPKKPRPIETYIFAIFDENG
***DNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQAEANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIKVSTAIELGVLDAFSPPTTAGGGSLDIVISESGWPAAGGDGALTNVDNAKTYNNNLIQHVKQGSPKKPRPIETYIFAIFD***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQAEANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIKVSTAIELGVLDAFSPPTTAGGGSLDIVISESGWPAAGGDGALTNVDNAKTYNNNLIQHVKQGSPKKPRPIETYIFAIFDENG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query202 2.2.26 [Sep-21-2011]
P52408 350 Glucan endo-1,3-beta-gluc N/A no 0.673 0.388 0.620 5e-42
Q03773347 Glucan endo-1,3-beta-gluc yes no 0.727 0.423 0.529 7e-41
P36401 339 Glucan endo-1,3-beta-gluc N/A no 0.663 0.395 0.572 5e-37
P07979 370 Lichenase OS=Nicotiana pl N/A no 0.678 0.370 0.514 1e-34
P52407 374 Glucan endo-1,3-beta-gluc N/A no 0.673 0.363 0.503 6e-32
Q01413 360 Glucan endo-1,3-beta-gluc N/A no 0.678 0.380 0.507 7e-32
P15797 371 Glucan endo-1,3-beta-gluc N/A no 0.678 0.369 0.492 6e-31
P27666 370 Glucan endo-1,3-beta-gluc N/A no 0.678 0.370 0.492 7e-31
P23546 370 Glucan endo-1,3-beta-gluc N/A no 0.678 0.370 0.492 7e-31
P23431 365 Glucan endo-1,3-beta-gluc N/A no 0.678 0.375 0.492 7e-31
>sp|P52408|E13B_PRUPE Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1 Back     alignment and function desciption
 Score =  170 bits (431), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 85/137 (62%), Positives = 104/137 (75%), Gaps = 1/137 (0%)

Query: 1   MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQ 60
           MVGD+LP + +V+ALY  NNI RMRLYDPN  ALEA RGSN +++ G+PN++L+ I+ +Q
Sbjct: 46  MVGDDLPPQAEVVALYKTNNIPRMRLYDPNPAALEALRGSNIKLLLGVPNENLQYIALSQ 105

Query: 61  AEANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIK 120
           A AN WVQ NV+N+  NVKFK IAVGNE KP D FAQ+LVP MRNIQ AI  A L  +IK
Sbjct: 106 ANANAWVQNNVRNYA-NVKFKYIAVGNEVKPSDSFAQFLVPAMRNIQEAISLAGLAKKIK 164

Query: 121 VSTAIELGVLDAFSPPT 137
           VSTAI+ GVL    PP+
Sbjct: 165 VSTAIDTGVLGETFPPS 181
Is thought to be an important plant defense-related product against fungal pathogens.
Prunus persica (taxid: 3760)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q03773|E13A_SOYBN Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1 Back     alignment and function description
>sp|P36401|E13H_TOBAC Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1 Back     alignment and function description
>sp|P07979|GUB_NICPL Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3 Back     alignment and function description
>sp|P52407|E13B_HEVBR Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis GN=HGN1 PE=1 SV=2 Back     alignment and function description
>sp|Q01413|E13B_SOLLC Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1 Back     alignment and function description
>sp|P15797|E13B_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2 Back     alignment and function description
>sp|P27666|E13F_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|P23546|E13E_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1 Back     alignment and function description
>sp|P23431|E13B_NICPL Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query202
147667132 337 beta-1,3-glucanase [Citrus unshiu] 0.683 0.409 0.842 5e-60
63333659 336 beta-1,3-glucanase class III [Citrus cle 0.712 0.428 0.809 6e-58
2274915 336 beta-1,3-glucanase [Citrus sinensis] 0.678 0.407 0.817 1e-56
297739872 332 unnamed protein product [Vitis vinifera] 0.970 0.590 0.440 3e-46
261942365 341 glucanase [Litchi chinensis] 0.717 0.425 0.605 3e-41
313600351 346 beta-1,3-glucanase [Malus hupehensis] 0.668 0.390 0.664 5e-41
16903144 343 beta-1,3-glucanase [Prunus persica] 0.663 0.390 0.627 2e-40
357448993230 Glucan endo-1,3-beta-glucosidase, basic 0.861 0.756 0.470 3e-40
1706548 350 RecName: Full=Glucan endo-1,3-beta-gluco 0.673 0.388 0.620 3e-40
16903142 350 beta-1,3-glucanase [Prunus persica] 0.673 0.388 0.620 3e-40
>gi|147667132|gb|ABQ45848.1| beta-1,3-glucanase [Citrus unshiu] Back     alignment and taxonomy information
 Score =  236 bits (601), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 118/140 (84%), Positives = 125/140 (89%), Gaps = 2/140 (1%)

Query: 1   MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDD--LRRISS 58
           M+GDNLPSKPDVIALYNQNNIRRMRLYDPN+EALEA RGSN EVM G+PND   LRRI+S
Sbjct: 29  MLGDNLPSKPDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIAS 88

Query: 59  TQAEANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQ 118
            QAEANTWVQ+NVQNFVNNVKFK IAVGNEAKPGDDFAQYLVP MRNIQNAI+GANLGSQ
Sbjct: 89  NQAEANTWVQDNVQNFVNNVKFKYIAVGNEAKPGDDFAQYLVPAMRNIQNAINGANLGSQ 148

Query: 119 IKVSTAIELGVLDAFSPPTT 138
           IKVSTAI  G LD  SPP+ 
Sbjct: 149 IKVSTAIAFGALDKSSPPSA 168

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|63333659|gb|AAY40462.1| beta-1,3-glucanase class III [Citrus clementina x Citrus reticulata] Back     alignment and taxonomy information
>gi|2274915|emb|CAA03908.1| beta-1,3-glucanase [Citrus sinensis] Back     alignment and taxonomy information
>gi|297739872|emb|CBI30054.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|261942365|gb|ACY06774.1| glucanase [Litchi chinensis] Back     alignment and taxonomy information
>gi|313600351|gb|ADR71671.1| beta-1,3-glucanase [Malus hupehensis] Back     alignment and taxonomy information
>gi|16903144|gb|AAL30426.1|AF435089_1 beta-1,3-glucanase [Prunus persica] Back     alignment and taxonomy information
>gi|357448993|ref|XP_003594772.1| Glucan endo-1,3-beta-glucosidase, basic isoform [Medicago truncatula] gi|355483820|gb|AES65023.1| Glucan endo-1,3-beta-glucosidase, basic isoform [Medicago truncatula] Back     alignment and taxonomy information
>gi|1706548|sp|P52408.1|E13B_PRUPE RecName: Full=Glucan endo-1,3-beta-glucosidase, basic isoform; AltName: Full=(1->3)-beta-glucan endohydrolase; Short=(1->3)-beta-glucanase; AltName: Full=Beta-1,3-endoglucanase; AltName: Full=PpGns1; Flags: Precursor gi|1222556|gb|AAA92013.1| beta-1,3-glucanase [Prunus persica] Back     alignment and taxonomy information
>gi|16903142|gb|AAL30425.1|AF435088_1 beta-1,3-glucanase [Prunus persica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query202
TAIR|locus:2082568 340 BG1 ""beta-1,3-glucanase 1"" [ 0.717 0.426 0.445 5.4e-51
TAIR|locus:2082518 341 BG3 ""beta-1,3-glucanase 3"" [ 0.643 0.381 0.470 1.3e-49
TAIR|locus:2082543 339 BGL2 ""beta-1,3-glucanase 2"" 0.658 0.392 0.445 1.1e-46
TAIR|locus:2130329 344 AT4G16260 [Arabidopsis thalian 0.673 0.395 0.442 4.7e-44
TAIR|locus:2164991 506 AT5G56590 [Arabidopsis thalian 0.673 0.268 0.352 5.7e-31
TAIR|locus:2149209 344 AT5G20390 [Arabidopsis thalian 0.673 0.395 0.333 2.3e-29
TAIR|locus:2149279 345 BETAG4 ""beta-1,3-glucanase 4" 0.673 0.394 0.347 1.2e-28
TAIR|locus:2149289 354 BG5 "beta-1,3-glucanase 5" [Ar 0.673 0.384 0.340 1.7e-28
TAIR|locus:2037905 426 AT1G32860 [Arabidopsis thalian 0.722 0.342 0.333 2.6e-27
TAIR|locus:2118339 534 AT4G29360 [Arabidopsis thalian 0.673 0.254 0.357 6.9e-27
TAIR|locus:2082568 BG1 ""beta-1,3-glucanase 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 321 (118.1 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
 Identities = 65/146 (44%), Positives = 91/146 (62%)

Query:     3 GDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQAE 62
             G+NLPS  + IAL+ Q NI+R+RLY P+ + L A RGSN EV  GLPN  L+ ++S+Q++
Sbjct:    35 GNNLPSPAETIALFKQKNIQRVRLYSPDHDVLAALRGSNIEVTLGLPNSYLQSVASSQSQ 94

Query:    63 ANTWXXXXXXXXXXXXXXXCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIKVS 122
             AN W                I+VGNE K  D +AQ+LVP M NI  A+  A LG +IKVS
Sbjct:    95 ANAWVQTYVMNYANGVRFRYISVGNEVKISDSYAQFLVPAMENIDRAVLAAGLGGRIKVS 154

Query:   123 TAIELGVLDAFSPPTTAGGGSLDIVI 148
             T++++GVL    PP+  G    D+++
Sbjct:   155 TSVDMGVLRESYPPSK-GSFRGDVMV 179
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
TAIR|locus:2082518 BG3 ""beta-1,3-glucanase 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082543 BGL2 ""beta-1,3-glucanase 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130329 AT4G16260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164991 AT5G56590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149209 AT5G20390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149279 BETAG4 ""beta-1,3-glucanase 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149289 BG5 "beta-1,3-glucanase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037905 AT1G32860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118339 AT4G29360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.390.824
3rd Layer3.2.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query202
pfam00332 310 pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam 2e-48
pfam00332310 pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam 5e-25
>gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 Back     alignment and domain information 
 Score =  159 bits (405), Expect = 2e-48
 Identities = 76/176 (43%), Positives = 108/176 (61%), Gaps = 3/176 (1%)

Query: 1   MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQ 60
           + G+NLPS  DV++LY  NNIRRMR+YDP+ +AL+A RGS   V+ G+PNDDL  ++ +Q
Sbjct: 7   VKGNNLPSPSDVVSLYKSNNIRRMRIYDPDTKALKALRGSGINVILGVPNDDLAELAGSQ 66

Query: 61  AEANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIK 120
           + A +WVQ+NV+ +   VK + IAVGNE  PG     +LVP MRNI+NA+  A LG++IK
Sbjct: 67  SNAASWVQDNVRPYAPKVKIRYIAVGNEVSPGTT-QSFLVPAMRNIRNALTAAGLGNKIK 125

Query: 121 VSTAIELGVLDAFSPPTTAG--GGSLDIVISESGWPAAGGDGALTNVDNAKTYNNN 174
           VST++   +L    PP+       +   +     + A      L NV     Y+NN
Sbjct: 126 VSTSVRFDILGNSFPPSYGSFRVETRSFMDPIIVFLAGTNAPLLANVYPYFAYSNN 181

Length = 310
>gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 202
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 100.0
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 100.0
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 98.79
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 98.34
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 97.87
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 97.59
PRK10150604 beta-D-glucuronidase; Provisional 97.57
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 95.37
PRK10340 1021 ebgA cryptic beta-D-galactosidase subunit alpha; R 92.69
PRK09525 1027 lacZ beta-D-galactosidase; Reviewed 89.86
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 88.57
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 87.28
smart0048167 POLIIIAc DNA polymerase alpha chain like domain. D 84.35
PF02449 374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 81.64
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information 
Probab=100.00  E-value=4.1e-55  Score=380.99  Aligned_cols=199  Identities=47%  Similarity=0.799  Sum_probs=164.5

Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeEEEecCChHHHHHhhcCCCeEEecCCCchhHHhhhhHHHHHHHHHHhhhhccCCceE
Q 038030            1 MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQAEANTWVQENVQNFVNNVKF   80 (202)
Q Consensus         1 ~~~~~lps~~~v~~llk~~~~~~vRiY~~d~~vl~A~~~~glkv~lgv~n~~~~~~a~~~~~a~~wv~~~v~~~~~~~~i   80 (202)
                      |+|||||+|.+|++|||+++|++||||++|+++|+|++++|++|++|++|++++.++.++.+|..|+++||.+|+|.++|
T Consensus         7 ~~~~nlp~p~~vv~l~ks~~i~~vri~d~~~~iL~a~a~S~i~v~v~vpN~~l~~la~~~~~A~~Wv~~nv~~~~~~~~i   86 (310)
T PF00332_consen    7 RVGNNLPSPCKVVSLLKSNGITKVRIYDADPSILRAFAGSGIEVMVGVPNEDLASLASSQSAAGSWVRTNVLPYLPAVNI   86 (310)
T ss_dssp             --SSS---HHHHHHHHHHTT--EEEESS--HHHHHHHTTS--EEEEEE-GGGHHHHHHHHHHHHHHHHHHTCTCTTTSEE
T ss_pred             CccCCCCCHHHHHHHHHhcccccEEeecCcHHHHHHHhcCCceeeeccChHHHHHhccCHHHHhhhhhhcccccCcccce
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCCCCCcHhhHHHHHHHHHHHHHhCCCCCCeeeeeeeeeceeccCCCC------------------------
Q 038030           81 KCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIKVSTAIELGVLDAFSPP------------------------  136 (202)
Q Consensus        81 ~~I~VGNE~l~~~~~~~~l~~~i~~v~~aL~~~gl~~~I~Vst~~~~~~l~~~~pp------------------------  136 (202)
                      ++|+||||++...... .|+|+|+++|++|.+.||+++|||+|+++++++.++|||                        
T Consensus        87 ~~i~VGnEv~~~~~~~-~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PPS~g~F~~~~~~~~~~~l~fL~~t~  165 (310)
T PF00332_consen   87 RYIAVGNEVLTGTDNA-YLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPPSAGVFRSDIASVMDPLLKFLDGTN  165 (310)
T ss_dssp             EEEEEEES-TCCSGGG-GHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSGGG-EESHHHHHHHHHHHHHHHHHT
T ss_pred             eeeecccccccCccce-eeccHHHHHHHHHHhcCcCCcceeccccccccccccCCCccCcccccchhhhhHHHHHhhccC
Confidence            9999999999865422 899999999999999999999999999999999999998                        


Q ss_pred             -------------------------------------------------------CCCCCCCCcEEEccccCCCCCCCCC
Q 038030          137 -------------------------------------------------------TTAGGGSLDIVISESGWPAAGGDGA  161 (202)
Q Consensus       137 -------------------------------------------------------~~~g~~~~~vvV~ETGWPs~G~~~~  161 (202)
                                                                             +++|+++++|+|+||||||+|+.+ 
T Consensus       166 spf~vN~yPyfa~~~~~~~~~l~yAlf~~~~~~~D~~~~y~nlfDa~~da~~~a~~~~g~~~~~vvv~ETGWPs~G~~~-  244 (310)
T PF00332_consen  166 SPFMVNVYPYFAYQNNPQNISLDYALFQPNSGVVDGGLAYTNLFDAMVDAVYAAMEKLGFPNVPVVVGETGWPSAGDPG-  244 (310)
T ss_dssp             --EEEE--HHHHHHHSTTTS-HHHHTT-SSS-SEETTEEESSHHHHHHHHHHHHHHTTT-TT--EEEEEE---SSSSTT-
T ss_pred             CCceeccchhhhccCCcccCCcccccccccccccccchhhhHHHHHHHHHHHHHHHHhCCCCceeEEeccccccCCCCC-
Confidence                                                                   778889999999999999999977 


Q ss_pred             CCCHHHHHHHHHHHHHHhhcCCCCCCC-CceEEEEEeecCCC
Q 038030          162 LTNVDNAKTYNNNLIQHVKQGSPKKPR-PIETYIFAIFDENG  202 (202)
Q Consensus       162 ~as~~na~~y~~~~~~~~~~Gtp~rp~-~~~~y~F~~Fden~  202 (202)
                       |+.+||+.|++++++|+.+|||+||+ .+++|||||||||.
T Consensus       245 -a~~~nA~~~~~nl~~~~~~gt~~~~~~~~~~y~F~~FdE~~  285 (310)
T PF00332_consen  245 -ATPENAQAYNQNLIKHVLKGTPLRPGNGIDVYIFEAFDENW  285 (310)
T ss_dssp             -CSHHHHHHHHHHHHHHCCGBBSSSBSS---EEES-SB--TT
T ss_pred             -CCcchhHHHHHHHHHHHhCCCcccCCCCCeEEEEEEecCcC
Confidence             99999999999999999999999999 99999999999984

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>PRK09525 lacZ beta-D-galactosidase; Reviewed Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>smart00481 POLIIIAc DNA polymerase alpha chain like domain Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query202
2cyg_A 312 Crystal Structure At 1.45- Resolution Of The Major 1e-30
2cyg_A312 Crystal Structure At 1.45- Resolution Of The Major 8e-12
3em5_A 316 Crystal Structure Of A Native Endo Beta-1,3-Glucana 3e-26
3em5_A316 Crystal Structure Of A Native Endo Beta-1,3-Glucana 3e-18
4gzi_A 323 Active-site Mutant Of Potato Endo-1,3-beta-glucanas 3e-22
4gzi_A323 Active-site Mutant Of Potato Endo-1,3-beta-glucanas 2e-12
3ur7_A 323 Higher-density Crystal Structure Of Potato Endo-1,3 3e-22
3ur7_A323 Higher-density Crystal Structure Of Potato Endo-1,3 3e-13
1aq0_A 306 Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space G 3e-17
1aq0_A306 Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space G 4e-14
1ghs_A306 The Three-Dimensional Structures Of Two Plant Beta- 6e-14
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 Back     alignment and structure 
Iteration: 1

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 87/143 (60%)
Query: 1   MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQ 60
           M+G+NLP   +V++LY  NNI RMRLYDPN+ AL+A R SN +V+  +P  D++ ++S  
Sbjct: 7   MLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNP 66
Query: 61  AEANTWXXXXXXXXXXXXXXXCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIK 120
           + A  W                IAVGNE  PG D AQY++P MRNI NA+  A L +QIK
Sbjct: 67  SAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIK 126
Query: 121 VSTAIELGVLDAFSPPTTAGGGS 143
           VSTA++ GVL    PP+     S
Sbjct: 127 VSTAVDTGVLGTSYPPSAGAFSS 149
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 Back     alignment and structure
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 Back     alignment and structure
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 Back     alignment and structure
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 Back     alignment and structure
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 Back     alignment and structure
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 Back     alignment and structure
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 Back     alignment and structure
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group Length = 306 Back     alignment and structure
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group Length = 306 Back     alignment and structure
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities Length = 306 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query202
2cyg_A 312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 3e-41
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 5e-14
1ghs_A 306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 1e-38
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 3e-15
3ur8_A 323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 7e-36
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 9e-12
3em5_A 316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 6e-35
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 2e-14
1aq0_A 306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 1e-32
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 3e-18
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-08
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 Back     alignment and structure
 Score =  141 bits (355), Expect = 3e-41
 Identities = 68/139 (48%), Positives = 95/139 (68%)

Query: 1   MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQ 60
           M+G+NLP   +V++LY  NNI RMRLYDPN+ AL+A R SN +V+  +P  D++ ++S  
Sbjct: 7   MLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNP 66

Query: 61  AEANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIK 120
           + A  W++ NV  +  +V F+ IAVGNE  PG D AQY++P MRNI NA+  A L +QIK
Sbjct: 67  SAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIK 126

Query: 121 VSTAIELGVLDAFSPPTTA 139
           VSTA++ GVL    PP+  
Sbjct: 127 VSTAVDTGVLGTSYPPSAG 145
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 Back     alignment and structure
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 Back     alignment and structure
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query202
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 100.0
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 100.0
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 100.0
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 100.0
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 100.0
2w61_A 555 GAS2P, glycolipid-anchored surface protein 2; glyc 99.63
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 99.35
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 99.27
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 99.17
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 98.96
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 98.08
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 98.01
3cmg_A 667 Putative beta-galactosidase; structural genomics, 98.0
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 97.9
3fn9_A 692 Putative beta-galactosidase; structural genomics, 97.89
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 97.88
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 97.88
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 97.84
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 97.82
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 97.8
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 97.76
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 97.65
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 97.63
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 97.55
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 97.54
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 97.52
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 97.45
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 97.35
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 97.23
3d3a_A 612 Beta-galactosidase; protein structure initiative I 97.09
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 96.9
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 96.86
4ekj_A 500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 96.86
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 96.86
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 96.82
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 96.64
3gm8_A 801 Glycoside hydrolase family 2, candidate beta-GLYC; 96.38
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 96.35
1wky_A 464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 96.22
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 94.84
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 94.66
3icg_A 515 Endoglucanase D; cellulase, xylanase, carbohydrate 94.6
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 94.55
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 94.14
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 94.01
1w91_A 503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 93.95
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 93.85
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 93.43
3qho_A 458 Endoglucanase, 458AA long hypothetical endo-1,4-be 93.32
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 93.29
3thd_A 654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 93.25
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 93.16
2y8k_A 491 Arabinoxylanase, carbohydrate binding family 6; hy 92.91
3oba_A 1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 92.59
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 92.39
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 91.75
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 91.32
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 91.05
2osx_A 481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 90.0
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 89.25
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 88.65
2vzs_A 1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 87.59
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 86.34
2je8_A 848 Beta-mannosidase; glycoside hydrolase, hydrolase; 84.51
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
Probab=100.00  E-value=6e-65  Score=441.38  Aligned_cols=199  Identities=55%  Similarity=0.952  Sum_probs=191.1

Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeEEEecCChHHHHHhhcCCCeEEecCCCchhHHhhhhHHHHHHHHHHhhhhccCCceE
Q 038030            1 MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQAEANTWVQENVQNFVNNVKF   80 (202)
Q Consensus         1 ~~~~~lps~~~v~~llk~~~~~~vRiY~~d~~vl~A~~~~glkv~lgv~n~~~~~~a~~~~~a~~wv~~~v~~~~~~~~i   80 (202)
                      |+|||||||++|++|||+++|++||||++|+++|+||+++|++|+|||||+++++++ ++++|.+|+++||.+|+|+++|
T Consensus         8 ~~~~nlp~p~~vv~llks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n~~l~~la-~~~~A~~WV~~nV~~y~p~~~I   86 (316)
T 3em5_A            8 MQGNNLPPVSEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQSLT-NPSNAKSWVQKNVRGFWSSVRF   86 (316)
T ss_dssp             CCCTTCCCHHHHHHHHHHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECGGGHHHHT-SHHHHHHHHHHHTGGGTTTSCE
T ss_pred             cCCCCCCCHHHHHHHHHHcCCCEEEEecCCHHHHHHhhcCCceEEEecccchhhhcc-CHHHHHHHHHHhhhhcCCCceE
Confidence            689999999999999999999999999999999999999999999999999999999 8999999999999999999999


Q ss_pred             EEEEecCCCCCCCC-c---HhhHHHHHHHHHHHHHhCCCCCCeeeeeeeeeceeccCCCC--------------------
Q 038030           81 KCIAVGNEAKPGDD-F---AQYLVPTMRNIQNAIDGANLGSQIKVSTAIELGVLDAFSPP--------------------  136 (202)
Q Consensus        81 ~~I~VGNE~l~~~~-~---~~~l~~~i~~v~~aL~~~gl~~~I~Vst~~~~~~l~~~~pp--------------------  136 (202)
                      ++|+||||++++++ +   +++|+|+|+++|++|+++||+++|||||++++++|.++|||                    
T Consensus        87 ~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl~~s~pPS~g~F~~~~~~~~~pil~fL  166 (316)
T 3em5_A           87 RYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLNPIIRFL  166 (316)
T ss_dssp             EEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSEEECSSGGGCEECGGGHHHHHHHHHHH
T ss_pred             EEEEEecccccCCCccccCHHHHHHHHHHHHHHHHHCCCCCceEEEecccccccccCCCCCCceechhHHHHHHHHHHHH
Confidence            99999999999876 5   99999999999999999999999999999999999999988                    


Q ss_pred             ------------------------------------------------------------CCCCCCCCcEEEccccCCCC
Q 038030          137 ------------------------------------------------------------TTAGGGSLDIVISESGWPAA  156 (202)
Q Consensus       137 ------------------------------------------------------------~~~g~~~~~vvV~ETGWPs~  156 (202)
                                                                                  +++|+++++|+|+||||||+
T Consensus       167 ~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~~~~~~~~~~~~Y~nlfDa~~Da~~~Al~~~g~~~~~v~V~EtGWPs~  246 (316)
T 3em5_A          167 SSIRSPLLANIYPYFTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVVVSESGWPSA  246 (316)
T ss_dssp             HHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCCSSCSEEETTEEECSHHHHHHHHHHHHHHHTTCTTCCEEEEEECCCSS
T ss_pred             HhcCCeeEeecchhhhccCCCCCcCchhhcccCCCcccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCceEeccccCCCC
Confidence                                                                        56889999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCC-CceEEEEEeecCCC
Q 038030          157 GGDGALTNVDNAKTYNNNLIQHVKQGSPKKPR-PIETYIFAIFDENG  202 (202)
Q Consensus       157 G~~~~~as~~na~~y~~~~~~~~~~Gtp~rp~-~~~~y~F~~Fden~  202 (202)
                      |+.+  ||++||++|+++++||+++|||+||+ .+++|||+|||||.
T Consensus       247 G~~~--as~~na~~y~~~li~~~~~GTP~rp~~~~~~y~F~lfDe~~  291 (316)
T 3em5_A          247 GAFA--ATFDNGRTYLSNLIQHVKRGTPKRPKRAIETYLFAMFDENK  291 (316)
T ss_dssp             SSTT--CCHHHHHHHHHHHHHHTTSCCSSSCSSCCCEEESCSBCCTT
T ss_pred             CCCC--CCHHHHHHHHHHHHHhccCCCCCCCCCCceEEEEEeecCCC
Confidence            9765  99999999999999999899999999 89999999999984
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 202
d2cyga1 312 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( 5e-43
d2cyga1312 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( 4e-17
d1ghsa_ 306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 6e-39
d1ghsa_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 8e-19
d1aq0a_ 306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 1e-36
d1aq0a_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 2e-19
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

 Score =  144 bits (364), Expect = 5e-43
 Identities = 68/139 (48%), Positives = 95/139 (68%)

Query: 1   MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQ 60
           M+G+NLP   +V++LY  NNI RMRLYDPN+ AL+A R SN +V+  +P  D++ ++S  
Sbjct: 7   MLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNP 66

Query: 61  AEANTWVQENVQNFVNNVKFKCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIK 120
           + A  W++ NV  +  +V F+ IAVGNE  PG D AQY++P MRNI NA+  A L +QIK
Sbjct: 67  SAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIK 126

Query: 121 VSTAIELGVLDAFSPPTTA 139
           VSTA++ GVL    PP+  
Sbjct: 127 VSTAVDTGVLGTSYPPSAG 145
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query202
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 100.0
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 98.91
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 98.8
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 98.32
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 98.14
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 98.03
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 97.9
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 97.9
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 97.84
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 97.84
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 97.81
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 97.78
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 97.57
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 97.54
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 97.49
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 97.43
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 97.34
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 96.46
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 96.38
d1edga_ 380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 95.96
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 95.73
d2je8a5 348 Five-domain beta-mannosidase, domain 3 {Bacteroide 95.3
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 94.79
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 94.65
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 93.97
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 93.83
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 92.22
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 91.52
d1nofa2277 Glycosyl hydrolase family 5 xylanase, catalytic do 89.75
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 88.79
d1kwga2 393 A4 beta-galactosidase {Thermus thermophilus [TaxId 85.8
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

Probab=100.00  E-value=3e-58  Score=397.99  Aligned_cols=200  Identities=51%  Similarity=0.920  Sum_probs=188.3

Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeEEEecCChHHHHHhhcCCCeEEecCCCchhHHhhhhHHHHHHHHHHhhhhccCCceE
Q 038030            1 MVGDNLPSKPDVIALYNQNNIRRMRLYDPNREALEAFRGSNFEVMPGLPNDDLRRISSTQAEANTWVQENVQNFVNNVKF   80 (202)
Q Consensus         1 ~~~~~lps~~~v~~llk~~~~~~vRiY~~d~~vl~A~~~~glkv~lgv~n~~~~~~a~~~~~a~~wv~~~v~~~~~~~~i   80 (202)
                      |+|||||||+||++|||++||++||+|++||++|+|++++||+||||+||+++..++++++.+.+|++++|.+|++.++|
T Consensus         7 ~~~~nlps~~~vv~lLk~~~i~~IRlY~~d~~vL~A~~~tgi~v~lGv~n~~l~~~~~~~~~a~~wv~~~v~~~~~~~~I   86 (312)
T d2cyga1           7 MLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAGDWIRRNVVAYWPSVSF   86 (312)
T ss_dssp             CCCSSCCCHHHHHHHHHHTTCCEEEESSCCHHHHHHHTTSCCEEEEEECHHHHHHHHHCTTHHHHHHHHHTGGGTTTSEE
T ss_pred             CccCCCCCHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHhcCCEEEEeeccchhhhccCCHHHHHHHHHHHHhccCCCceE
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCCCCCcHhhHHHHHHHHHHHHHhCCCCCCeeeeeeeeeceeccCCCC------------------------
Q 038030           81 KCIAVGNEAKPGDDFAQYLVPTMRNIQNAIDGANLGSQIKVSTAIELGVLDAFSPP------------------------  136 (202)
Q Consensus        81 ~~I~VGNE~l~~~~~~~~l~~~i~~v~~aL~~~gl~~~I~Vst~~~~~~l~~~~pp------------------------  136 (202)
                      ++|+||||++.+++....++++|+++|++|+++|+.+.|+++++.+++++..++||                        
T Consensus        87 ~~IaVGNE~l~~~~~~~~~lpa~~~~~~aL~~~g~~~~i~~t~~~~~~~~~~s~p~sa~~~~~~~~~~l~~~~~fl~~~~  166 (312)
T d2cyga1          87 RYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNG  166 (312)
T ss_dssp             EEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGBSCCSSGGGCCBCHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEecCEEeeCCcCchhhcccHHHHHHHHHHCCCCCCceeeeeeeeeccccCCCCccccccchhHHHHHHHHHHHHhcC
Confidence            99999999999877667788999999999999999999999999998887776665                        


Q ss_pred             --------------------------------------------------------CCCCCCCCcEEEccccCCCCCCCC
Q 038030          137 --------------------------------------------------------TTAGGGSLDIVISESGWPAAGGDG  160 (202)
Q Consensus       137 --------------------------------------------------------~~~g~~~~~vvV~ETGWPs~G~~~  160 (202)
                                                                              ++.|+++++|+|+||||||+|+. 
T Consensus       167 ~~~~~n~ypy~~~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~~d~~~d~~~~a~~~~g~~~~~ivI~EtGWPs~G~~-  245 (312)
T d2cyga1         167 APLLVNVYPYFSYTGNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWPSAGGG-  245 (312)
T ss_dssp             CCEEEECCHHHHHHHSTTTSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEEEECCCSSSSS-
T ss_pred             CeeeEeccchhhhccCcccccchhhhccCCCccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCcccCCCC-
Confidence                                                                    46678999999999999999965 


Q ss_pred             CCCCHHHHHHHHHHHHHHhhcCCCCCCC-CceEEEEEeecCC
Q 038030          161 ALTNVDNAKTYNNNLIQHVKQGSPKKPR-PIETYIFAIFDEN  201 (202)
Q Consensus       161 ~~as~~na~~y~~~~~~~~~~Gtp~rp~-~~~~y~F~~Fden  201 (202)
                      +.||++||++|++++++|+++|||+||+ .+++|+||||||+
T Consensus       246 ~~as~~na~~y~~~l~~~~~~gtp~~~~~~i~~f~FeaFDE~  287 (312)
T d2cyga1         246 AEASTSNAQTYNQNLIRHVGGGTPRRPGKEIEAYIFEMFNEN  287 (312)
T ss_dssp             TTSSHHHHHHHHHHHHHHGGGCCSSSCSSCCCEEESCSBCCT
T ss_pred             CCCCHHHHHHHHHHHHHHHhcCCCCCCCCCccEEEEeEeCCC
Confidence            3499999999999999999999999999 9999999999997
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure