Citrus Sinensis ID: 038032
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 279 | ||||||
| 296082190 | 599 | unnamed protein product [Vitis vinifera] | 0.953 | 0.444 | 0.483 | 6e-63 | |
| 359488514 | 863 | PREDICTED: receptor-like protein kinase | 0.964 | 0.311 | 0.479 | 2e-61 | |
| 359488516 | 1393 | PREDICTED: receptor-like protein kinase | 0.931 | 0.186 | 0.480 | 2e-61 | |
| 147778506 | 827 | hypothetical protein VITISV_015218 [Viti | 0.964 | 0.325 | 0.478 | 4e-61 | |
| 296082193 | 932 | unnamed protein product [Vitis vinifera] | 0.949 | 0.284 | 0.469 | 1e-59 | |
| 147778507 | 511 | hypothetical protein VITISV_015219 [Viti | 0.971 | 0.530 | 0.450 | 2e-57 | |
| 359488520 | 894 | PREDICTED: receptor-like protein kinase | 0.967 | 0.302 | 0.460 | 2e-55 | |
| 359488331 | 1419 | PREDICTED: receptor-like protein kinase | 0.982 | 0.193 | 0.456 | 2e-55 | |
| 255580328 | 904 | kinase, putative [Ricinus communis] gi|2 | 0.917 | 0.283 | 0.459 | 8e-52 | |
| 449476518 | 892 | PREDICTED: receptor-like protein kinase | 0.896 | 0.280 | 0.457 | 2e-51 |
| >gi|296082190|emb|CBI21195.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 144/298 (48%), Positives = 185/298 (62%), Gaps = 32/298 (10%)
Query: 1 MKNTGDRCL-------ITPTYILFFIHHMAFAVSGASDTPYEAVDSILLACGSNGTFHSL 53
M+NTG+RCL +TP Y+ F+HH+ ++G Y ++ + CGS+G L
Sbjct: 1 MRNTGNRCLCLIIPSILTPVYLFIFLHHLTIPIAG-----YSPTENFAINCGSSGNSQEL 55
Query: 54 EYRTWIGDISPGHSYYFQP-KNDTSRIFTTPQQP----PYSAARLSHSQFTYILNLTAGQ 108
R W+GDI F P +N TS + + P PYS ARLS +FTY LTAGQ
Sbjct: 56 G-RNWMGDIDSK----FSPLENGTSTTSSADEPPFLSVPYSTARLSRYEFTYSFPLTAGQ 110
Query: 109 KFIRLYFYSTSYPG-FDRPKAFFSVK-AGSFTLLSNFRASLTADA-LGEDSFFKEFCINV 165
K+IRL+F+ +SY G FDR A FSVK G +TLLSNF +L AD+ LG + KEFCIN
Sbjct: 111 KYIRLHFHPSSYGGEFDRSTAIFSVKTGGGYTLLSNFSGALVADSDLGREKILKEFCINF 170
Query: 166 EESQRLLNITFKSSPDYKDSYAFINGIEIVSMPLNLYY----DLSFLFVGQEKRFMIETS 221
+E LNITF + +D+YAFINGIEIVSMP LYY D F F+GQ F +ET
Sbjct: 171 KEEGEKLNITFAPTAG-EDAYAFINGIEIVSMPDYLYYTSPQDGGFKFIGQHNSFFVETD 229
Query: 222 NALESLYRINVGGSDISPLGDTGMFRTWSADDAYLTDARPSALSVNTSIVLRFTKISN 279
+ALE+LYR+NVGG +SP+ DTGMFRTW ADD YL + + + VN SI L+F +I N
Sbjct: 230 HALENLYRLNVGGQSLSPMDDTGMFRTWDADDEYL--PKLAFVPVNGSITLKFIQIPN 285
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359488514|ref|XP_003633768.1| PREDICTED: receptor-like protein kinase FERONIA-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359488516|ref|XP_003633769.1| PREDICTED: receptor-like protein kinase FERONIA-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147778506|emb|CAN76103.1| hypothetical protein VITISV_015218 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|296082193|emb|CBI21198.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147778507|emb|CAN76104.1| hypothetical protein VITISV_015219 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359488520|ref|XP_003633771.1| PREDICTED: receptor-like protein kinase FERONIA-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359488331|ref|XP_002277688.2| PREDICTED: receptor-like protein kinase FERONIA [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255580328|ref|XP_002530992.1| kinase, putative [Ricinus communis] gi|223529419|gb|EEF31380.1| kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449476518|ref|XP_004154759.1| PREDICTED: receptor-like protein kinase FERONIA-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 279 | ||||||
| TAIR|locus:2081895 | 895 | FER "FERONIA" [Arabidopsis tha | 0.903 | 0.281 | 0.396 | 8.9e-40 | |
| TAIR|locus:2177202 | 873 | AT5G39000 [Arabidopsis thalian | 0.856 | 0.273 | 0.382 | 8.3e-33 | |
| TAIR|locus:2152312 | 880 | AT5G38990 [Arabidopsis thalian | 0.906 | 0.287 | 0.362 | 1.4e-32 | |
| TAIR|locus:2177152 | 806 | AT5G39030 [Arabidopsis thalian | 0.817 | 0.282 | 0.388 | 1.4e-32 | |
| TAIR|locus:2177142 | 813 | AT5G39020 [Arabidopsis thalian | 0.838 | 0.287 | 0.366 | 2.9e-31 | |
| TAIR|locus:2084953 | 850 | ANX1 "ANXUR1" [Arabidopsis tha | 0.849 | 0.278 | 0.321 | 2.2e-26 | |
| TAIR|locus:2050080 | 871 | AT2G21480 [Arabidopsis thalian | 0.831 | 0.266 | 0.335 | 1.5e-21 | |
| TAIR|locus:2148830 | 858 | ANX2 "ANXUR2" [Arabidopsis tha | 0.759 | 0.247 | 0.314 | 2.5e-21 | |
| TAIR|locus:2136338 | 878 | AT4G39110 [Arabidopsis thalian | 0.824 | 0.261 | 0.325 | 5.8e-19 | |
| TAIR|locus:2174249 | 829 | AT5G59700 [Arabidopsis thalian | 0.741 | 0.249 | 0.309 | 2.3e-18 |
| TAIR|locus:2081895 FER "FERONIA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 433 (157.5 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 105/265 (39%), Positives = 142/265 (53%)
Query: 1 MKNTGDRCLITPTYILFFIHHMAFAVSGASDTPYEAVDSILLACGSNGT-FHSLEYRTWI 59
MK T R ++ +L I A + A+D Y + ILL CG + + R WI
Sbjct: 1 MKITEGRFRLSLLLLLLLIS--AATLISAAD--YSPTEKILLNCGGGASNLTDTDNRIWI 56
Query: 60 GDISPGHSYYFQPKNDTSRIFTT-PQQP--PYSAARLSHSQFTYILNLTAGQKFIRLYFY 116
D+ + TS T P P PY AR+ S FTY + +G+KF+RLYFY
Sbjct: 57 SDVKSKFLSSSSEDSKTSPALTQDPSVPEVPYMTARVFRSPFTYTFPVASGRKFVRLYFY 116
Query: 117 STSYPGFDRPKAFFSVKAGSFTLLSNFRASLTADALGEDSFFKEFCINVEESQRLLNITF 176
SY G + + FSV G +TLL NF AS TA+AL KEF +NVE LN+TF
Sbjct: 117 PNSYDGLNATNSLFSVSFGPYTLLKNFSASQTAEALTYAFIIKEFVVNVEGGT--LNMTF 174
Query: 177 KSSPDYKDSYAFINGIEIVSMPLNLYY--DLSFLFVGQEKRFMIETSNALESLYRINVGG 234
++YAF+NGIE+ SMP ++Y D + VG I+ S ALE++YR+NVGG
Sbjct: 175 TPESAPSNAYAFVNGIEVTSMP-DMYSSTDGTLTMVGSSGSVTIDNSTALENVYRLNVGG 233
Query: 235 SDISPLGDTGMFRTWSADDAYLTDA 259
+DISP DTG++R+W D Y+ A
Sbjct: 234 NDISPSADTGLYRSWYDDQPYIFGA 258
|
|
| TAIR|locus:2177202 AT5G39000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152312 AT5G38990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2177152 AT5G39030 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2177142 AT5G39020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2084953 ANX1 "ANXUR1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2050080 AT2G21480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2148830 ANX2 "ANXUR2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136338 AT4G39110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2174249 AT5G59700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 279 | |||
| pfam12819 | 335 | pfam12819, Malectin_like, Carbohydrate-binding pro | 2e-16 |
| >gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 2e-16
Identities = 53/253 (20%), Positives = 86/253 (33%), Gaps = 46/253 (18%)
Query: 42 LACGSNGTFHSLEY---RTWIGD---ISPGHSYYFQPKNDTSRIFTTPQQPPYSAARL-- 93
+ CG + TW+ D I G S +N +S + PY R
Sbjct: 1 IDCGLPSNESYTDPSTGITWVSDAGFIDTGKSGNISKENSSSFL-----SKPYKTLRSFP 55
Query: 94 SHSQFTYILNLTAGQK---FIRLYFYSTSYPGFDRPKAFFSVKAGSFTLLS--NFRASLT 148
+ Y L +T G+ IR F +Y G + SF L N ++
Sbjct: 56 DGKRNCYTLPVTPGKGTKYLIRATFLYGNYDGLNS-----VSSPPSFDLYLGVNLWTTVN 110
Query: 149 ADALGEDSFFKEFCINVEESQRLLNITFKSSPDYKDSYAFINGIEIVSMPLNLYYDLSFL 208
DS KE+ I+V +S L ++ ++ FI+ +E+ +P +LY
Sbjct: 111 LSNDSGDSVVKEYIIHVTKSDTL-SVCLVNT---GTGTPFISALELRPLPDSLYPSSG-- 164
Query: 209 FVGQEKRFMIETSNALESLYRINVG--GSDISPLGDTGMFRTWSADDAYLTDARPSALSV 266
S AL+ + R+N G I D R W + S +S
Sbjct: 165 -----------GSQALKLVARLNFGGSEGTIRYPDDV-YDRIWEPFFSSPGW---SQIST 209
Query: 267 NTSIVLRFTKISN 279
+ S+ +
Sbjct: 210 SLSVDISSNNAPY 222
|
Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. Length = 335 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 279 | |||
| PLN03150 | 623 | hypothetical protein; Provisional | 100.0 | |
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 100.0 | |
| PF11721 | 174 | Malectin: Di-glucose binding within endoplasmic re | 99.88 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.88 | |
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 99.76 | |
| KOG3593 | 355 | consensus Predicted receptor-like serine/threonine | 97.13 |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=324.35 Aligned_cols=196 Identities=18% Similarity=0.266 Sum_probs=153.5
Q ss_pred CCCCceEEEeeCCCCcc-cCCCCCeeeCCCCCCCcceeccCCCCcccCCCCCCcccceeeccCC----CcEEEEEecC-C
Q 038032 34 YEAVDSILLACGSNGTF-HSLEYRTWIGDISPGHSYYFQPKNDTSRIFTTPQQPPYSAARLSHS----QFTYILNLTA-G 107 (279)
Q Consensus 34 ~~p~~~~~InCG~~~~~-~d~~gr~W~~D~~~~~~~~f~~~~~~~~~~~~~~~~~Y~TAR~f~~----~~tY~fpv~~-G 107 (279)
...+++|+||||++.+. +|.+||+|++|.. |..+.....+.+..++++|+|||+|+. ..||+||+.+ |
T Consensus 20 ~~~~~~~~I~CGs~~~~~~d~~~~~w~~D~~------~~~~~~~~~~~~~~~~~~~~t~R~F~~~~g~~~cY~~~~~~~g 93 (623)
T PLN03150 20 SPEPFTMRISCGARVNVRTAPTNTLWYKDFA------YTGGIPANATRPSFIAPPLKTLRYFPLSDGPENCYNINRVPKG 93 (623)
T ss_pred cCCCccEEEeCCCCCCcccCCCCCEEcCCcc------cccCccccccCcccccchhhccccCCcccccccceEeeecCCC
Confidence 33668899999999876 4678999999975 532222112233345678999999996 5799999876 8
Q ss_pred cEEEEEEeeeccCCCCCCCCceEEEEECC---EEEEeeecccccccccCCceEEEEEEEeecCCCCeEEEEEEeCCCCCC
Q 038032 108 QKFIRLYFYSTSYPGFDRPKAFFSVKAGS---FTLLSNFRASLTADALGEDSFFKEFCINVEESQRLLNITFKSSPDYKD 184 (279)
Q Consensus 108 ~ylVRLhF~~~~y~~~~~~~~~FdV~i~~---~~ll~~f~i~~~a~~~~~~~~~kEf~v~v~~~~~~L~I~f~P~~~~~~ 184 (279)
+|+|||||++..|++++ ..+.|||++++ .+++.+|+.. ...++||+++++++ +.|.|||.|.. +
T Consensus 94 ~ylVRl~F~~~~y~~~~-~~~~Fdv~~~~~~~~tv~~~~~~~-------~~~v~~E~i~~~~~--~~l~vcf~~~~---~ 160 (623)
T PLN03150 94 HYSVRVFFGLVAEPNFD-SEPLFDVSVEGTQISSLKSGWSSH-------DEQVFAEALVFLTD--GSASICFHSTG---H 160 (623)
T ss_pred cEEEEEEeecCCcCCCC-CCCceEEEECcEEEEEEecCcccC-------CCcEEEEEEEEecC--CcEEEEEecCC---C
Confidence 99999999988777766 67899999999 6666666532 24589999999998 89999999976 6
Q ss_pred cceeEEEEEEEEcCCCccccccceeccccccccccchhhheeeeEeeccCcc----cCCCCCCC-CcccccCCCCcccc
Q 038032 185 SYAFINGIEIVSMPLNLYYDLSFLFVGQEKRFMIETSNALESLYRINVGGSD----ISPLGDTG-MFRTWSADDAYLTD 258 (279)
Q Consensus 185 s~aFINgIEV~slp~~ly~~~~~~~~g~~~~~~~~~~~aLet~yRlNvGG~~----i~~~~Dt~-l~R~W~~D~~yl~~ 258 (279)
+.||||||||++||+++|.... + ...+.+||++||+||||++ +++++|+- +||+|.+|++|+.+
T Consensus 161 ~~pFIs~iEv~~l~~~~y~~~~----~------~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~~ 229 (623)
T PLN03150 161 GDPAILSIEILQVDDKAYNFGP----S------WGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSG 229 (623)
T ss_pred CCCceeEEEEEEcCcccccccc----c------ccCceEEEEEEEEEecCcccccccCCCCCcccCccccCcCcccCCC
Confidence 7899999999999999994221 0 0135679999999999975 56777772 49999999999844
|
|
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
| >PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan | Back alignment and domain information |
|---|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
| >KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 279 | |||
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 2e-10 | |
| 2glj_A | 461 | Probable M18-family aminopeptidase 1; aminopeptida | 4e-04 |
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 | Back alignment and structure |
|---|
Score = 57.3 bits (138), Expect = 2e-10
Identities = 19/170 (11%), Positives = 44/170 (25%), Gaps = 20/170 (11%)
Query: 44 CGSNGTFHSLEYRTWIGDISPGHSYYFQ--PKNDTSRIFTTPQQPPYSAARLSHSQFTY- 100
G + D G Q Y R + F Y
Sbjct: 12 AGGESHVDVHG-IHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNEDSFGYD 70
Query: 101 ILNLTAGQKFIRLYFYSTSYPGFDRPKAFFSVKAGSFTLLSNFRASLTADALGEDSFFKE 160
I G+ + L F + + F V+ T++ + + + +
Sbjct: 71 IPIKEEGEYVLVLKFAEVYFAQSQQ--KVFDVRVNGHTVVKDL--DIFDRVGHSTAHDEI 126
Query: 161 FCINVEESQRLLNITFKSS----------PDYKDSYAFINGIEIVSMPLN 200
I++++ + L++ + S + + I+ +
Sbjct: 127 IPISIKKGK--LSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFIMKGTAD 174
|
| >2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Length = 461 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 279 | |||
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 100.0 | |
| 2w47_A | 144 | Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. | 91.75 | |
| 2vzp_A | 127 | Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS | 91.26 | |
| 2o14_A | 375 | Hypothetical protein YXIM; NESG, X-RAY, SR595, str | 88.24 | |
| 2w3j_A | 145 | Carbohydrate binding module; sugar-binding protein | 87.37 | |
| 2wz8_A | 156 | Cellulosome protein dockerin type I; sugar binding | 81.4 | |
| 2w87_A | 139 | Esterase D, XYL-CBM35; plant cell WALL degradation | 80.04 |
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=244.49 Aligned_cols=147 Identities=12% Similarity=0.137 Sum_probs=118.4
Q ss_pred ceEEEeeCCCCcccCCCCCeeeCCCCCCCcceeccCCC-C--cc----c-CCCCCCcccceeeccCCCcEEEEEecC-Cc
Q 038032 38 DSILLACGSNGTFHSLEYRTWIGDISPGHSYYFQPKND-T--SR----I-FTTPQQPPYSAARLSHSQFTYILNLTA-GQ 108 (279)
Q Consensus 38 ~~~~InCG~~~~~~d~~gr~W~~D~~~~~~~~f~~~~~-~--~~----~-~~~~~~~~Y~TAR~f~~~~tY~fpv~~-G~ 108 (279)
..|||||||+..+ |.+||+|.+|.. |...+. . .. . ...+|+.+|+|||+++.+++|.||+.+ |+
T Consensus 6 ~~~~INcGg~~~~-d~~gr~w~~D~~------~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~~~tY~f~v~~~G~ 78 (174)
T 2jwp_A 6 VIWAVNAGGESHV-DVHGIHYRKDPL------EGRVGRASDYGMKLPILRSNPEDQVLYQTERYNEDSFGYDIPIKEEGE 78 (174)
T ss_dssp EEEEEEETSSSEE-ETTTEEECSSCS------STTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCSCEEEEEECCSCEE
T ss_pred EEEEEECCCCCcc-CCCCCEEcCCcC------cccCCcccccccceEecccCCCCchhhhhhccCCCCeEEEEEeCCCeE
Confidence 5799999999876 789999999975 431111 1 00 1 112356799999999999999999985 89
Q ss_pred EEEEEEeeeccCCCCCCCCceEEEEECCEEEEeeecccccccccCCceEEEEEEEeecC-----------CCCeEEEEEE
Q 038032 109 KFIRLYFYSTSYPGFDRPKAFFSVKAGSFTLLSNFRASLTADALGEDSFFKEFCINVEE-----------SQRLLNITFK 177 (279)
Q Consensus 109 ylVRLhF~~~~y~~~~~~~~~FdV~i~~~~ll~~f~i~~~a~~~~~~~~~kEf~v~v~~-----------~~~~L~I~f~ 177 (279)
|+|||||||+.+.+ .++|+|||+|||++++++||+..++++ ..+++|||.++|++ .+++|+|+|.
T Consensus 79 Y~VrLhF~ei~~~~--~~~rvFdV~ing~~~l~~fdi~~~ag~--~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~ 154 (174)
T 2jwp_A 79 YVLVLKFAEVYFAQ--SQQKVFDVRVNGHTVVKDLDIFDRVGH--STAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFV 154 (174)
T ss_dssp EEEEEEEECCSCCC--SSSSCEEEEETTEEEEEEECHHHHHSS--SSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEE
T ss_pred EEEEEEEeccccCC--CCCeEeEEEECCEEeecCcCHHHhhCC--CeeEEEEEEEEEecCceeeeeeecccCCeEEEEEe
Confidence 99999999998874 789999999999999999999988764 57899999987521 1278999999
Q ss_pred eCCCCCCcceeEEEEEEEEcC
Q 038032 178 SSPDYKDSYAFINGIEIVSMP 198 (279)
Q Consensus 178 P~~~~~~s~aFINgIEV~slp 198 (279)
|.. ...||||||||++.+
T Consensus 155 p~~---~~~a~inaIEI~~~~ 172 (174)
T 2jwp_A 155 KGY---YDNPKVCALFIMKGT 172 (174)
T ss_dssp CSS---SCSSSEEEEEEESSC
T ss_pred ccC---CCCcEEEEEEEEeCc
Confidence 875 567999999999754
|
| >2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A | Back alignment and structure |
|---|
| >2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A* | Back alignment and structure |
|---|
| >2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 | Back alignment and structure |
|---|
| >2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} | Back alignment and structure |
|---|
| >2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 279 | |||
| d2o14a1 | 146 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 98.19 |
| >d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: YxiM N-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=98.19 E-value=9.4e-06 Score=65.24 Aligned_cols=81 Identities=20% Similarity=0.189 Sum_probs=64.5
Q ss_pred CcEEEEEecCCcEEEEEEeeeccCCCCCCCCceEEEEECCEEEEeeecccccccccCCceEEEEEEEeecCCCCeEEEEE
Q 038032 97 QFTYILNLTAGQKFIRLYFYSTSYPGFDRPKAFFSVKAGSFTLLSNFRASLTADALGEDSFFKEFCINVEESQRLLNITF 176 (279)
Q Consensus 97 ~~tY~fpv~~G~ylVRLhF~~~~y~~~~~~~~~FdV~i~~~~ll~~f~i~~~a~~~~~~~~~kEf~v~v~~~~~~L~I~f 176 (279)
...|+++|+.|.|.|+++|-+. ...+|.+.+...+.++. +....+.|.|+|++ ++|+|.|
T Consensus 64 ~~~f~v~vPnG~Y~Vtv~~Gd~---------~~~~~~~eg~~~~~~~~---------g~~~~~~~~V~VtD--G~L~l~f 123 (146)
T d2o14a1 64 NNTFNVDLPNGLYEVKVTLGNT---------ARASVAAEGVFQVINMT---------GDGAEDTFQIPVTD--GQLNLLV 123 (146)
T ss_dssp SCCEEEECCSEEEEEEEEESSC---------SEEEEEETTEEEEEEEE---------STTCEEEEEEEECS--SEEEEEE
T ss_pred CceEEEECCCCeEEEEEEEecC---------CCccEEEeeEEeccccC---------CccEEEEEEEEEEC--CeEEEEE
Confidence 4689999999999999999852 24578899988777653 23346789999999 9999999
Q ss_pred EeCCCCCCcceeEEEEEEEEcCC
Q 038032 177 KSSPDYKDSYAFINGIEIVSMPL 199 (279)
Q Consensus 177 ~P~~~~~~s~aFINgIEV~slp~ 199 (279)
..... +..+-||+|||-++++
T Consensus 124 t~~~~--G~~~~in~l~I~~~~d 144 (146)
T d2o14a1 124 TEGKA--GTAFTLSALKIKKLSD 144 (146)
T ss_dssp EESST--TSCCEEEEEEEEEEES
T ss_pred ecCCC--CCccEEEEEEEEeccc
Confidence 86542 5679999999999875
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