Citrus Sinensis ID: 038123

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------51
MAREHELLSPEIVNRGVENSGPYAGSLSFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLPTFDTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVEKPERSPWLESSE
cccccccccHHHHccccccccccccccccEEccccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEEEEccccccccccccccccccccccccEEEEEEccccccccccccccEEEEccccccccccccccEEEcccccEEEEEcccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHccEEEEccccHHHHHHHHHHccccHHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccEEEEEEEccccHHEEEEEEEEcccccccccccccccc
cccHHHHHHHHHHHccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEcEccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEHHHHHHccccccccccEEEEEEcccccEEEEccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHHccccHHcccHcHHEHHHcccccccHHHHHHHHHHHccccccccEEEEEEEcccccccHHHHHHHcccccccccccHHccc
marehellspeivnrgvensgpyagslSFSVRVQRRlpdflnsvnlkYVRLGYGYLlshgvylipapILIVIFGAQigkltfsdllptfdttdAVFLFGLLGILAYIYLETTPCWIYLVdfacyrppnelkiSKKEFIEQARESGNFNDASLEFKQRIIknsglgdetylpravfcpgyrpnlkdgREEAAMVLFGAIDDLLaatkirpkdIRVLVVNCgvlnttpslSAMVINHYKLrhninsfnlggmgcsaGIIAIDLAKDLLNAYPGSYALVVSTEVVSntwyggnevdmllpnCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRthkgmdnrsfkcmhlkedaegrqglsvsKDMIEVGGHALKAnittlgplvlpvseQVHFFTNLLlkkktkpyipdyKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANagvkrgdriwqtafgsgvkcNSVVWKALRnvekperspwlesse
marehellspeivnrgvensgpYAGSLSFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLPTFDTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQAREsgnfndaslEFKQRIIKnsglgdetylprAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKqlvrthkgmdnrSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAfgsgvkcnsvVWKALrnvekperspwlesse
MAREHELLSPEIVNRGVENSGPYAGSLSFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLPTFDTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNlllkkkTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVEKPERSPWLESSE
**********************YAGSLSFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLPTFDTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISK*EFI***********ASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHL***********VSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELT*******************SSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRN**************
**********************************RRLPDFLNSVNLKYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLPTFDTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA****KRGDRIWQTAFGSGVKCNSVVWKALRNVEK**RSPW*ES*E
********SPEIVNRGVENSGPYAGSLSFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLPTFDTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNV*************
************VNRGVEN******SLSFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLPTFDTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVEKPERSPWL*SSE
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAREHELLSPEIVNRGVENSGPYAGSLSFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLPTFDTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICIxxxxxxxxxxxxxxxxxxxxxxxxxxxxLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVEKPERSPWLESSE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query508 2.2.26 [Sep-21-2011]
Q570B4550 3-ketoacyl-CoA synthase 1 yes no 0.992 0.916 0.555 1e-177
Q9SUY9451 3-ketoacyl-CoA synthase 1 no no 0.874 0.984 0.576 1e-159
O48780509 3-ketoacyl-CoA synthase 1 no no 0.927 0.925 0.541 1e-149
Q9LN49516 3-ketoacyl-CoA synthase 4 no no 0.919 0.905 0.521 1e-149
Q9SIX1512 3-ketoacyl-CoA synthase 9 no no 0.923 0.916 0.519 1e-148
Q9XF43497 3-ketoacyl-CoA synthase 6 no no 0.923 0.943 0.498 1e-141
Q5XEP9528 3-ketoacyl-CoA synthase 1 no no 0.927 0.892 0.511 1e-141
Q9MAM3528 3-ketoacyl-CoA synthase 1 no no 0.937 0.901 0.503 1e-139
O65677487 Probable 3-ketoacyl-CoA s no no 0.895 0.934 0.503 1e-137
Q9C6L5492 3-ketoacyl-CoA synthase 5 no no 0.919 0.949 0.484 1e-136
>sp|Q570B4|KCS10_ARATH 3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2 Back     alignment and function desciption
 Score =  621 bits (1602), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/538 (55%), Positives = 394/538 (73%), Gaps = 34/538 (6%)

Query: 2   AREHELLSPEIVNRGVENSGPYAGSLSFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHGV 61
           + E +LLS EIVNRG+E SGP AGS +FSVRV+RRLPDFL SVNLKYV+LGY YL++H V
Sbjct: 4   SNEQDLLSTEIVNRGIEPSGPNAGSPTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAV 63

Query: 62  YLIPAPILIVIFGAQIGKLTFSDL---LPTFDTTDAVFLFGLLGILAYIYLETTPCWIYL 118
           YL   P+L+++F A++G L+  ++   L  +D    +  FG+  + A +Y  + P  +YL
Sbjct: 64  YLATIPVLVLVFSAEVGSLSREEIWKKLWDYDLATVIGFFGVFVLTACVYFMSRPRSVYL 123

Query: 119 VDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPG 178
           +DFACY+P +E K++K+EFIE AR+SG F++ +L FK+RI++ SG+GDETY+PR++    
Sbjct: 124 IDFACYKPSDEHKVTKEEFIELARKSGKFDEETLGFKKRILQASGIGDETYVPRSISSSE 183

Query: 179 YRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKL 238
               +K+GREEA+ V+FGA+D+L   T+++PKD+ VLVVNC + N TPSLSAMVINHYK+
Sbjct: 184 NITTMKEGREEASTVIFGALDELFEKTRVKPKDVGVLVVNCSIFNPTPSLSAMVINHYKM 243

Query: 239 RHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPN 298
           R NI S+NLGGMGCSAGIIAIDLA+D+L + P SYA+VVSTE+V   WY G++  M++PN
Sbjct: 244 RGNILSYNLGGMGCSAGIIAIDLARDMLQSNPNSYAVVVSTEMVGYNWYVGSDKSMVIPN 303

Query: 299 CFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSK 358
           CFFRMG +AV+LS+ R D   +KY  + +VRTHK  D+RSF+ ++ +ED +G +GL +S+
Sbjct: 304 CFFRMGCSAVMLSNRRRDFRHAKYRLEHIVRTHKAADDRSFRSVYQEEDEQGFKGLKISR 363

Query: 359 DMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLK----------------------- 395
           D++EVGG ALK NITTLGPLVLP SEQ+ FF  LL +                       
Sbjct: 364 DLMEVGGEALKTNITTLGPLVLPFSEQLLFFAALLRRTFSPAAKTSTTTSFSTSATAKTN 423

Query: 396 -------KKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGN 448
                    +KPYIPDYK AFEH C  A SK VL+E+QKNL L+EE MEASR TL RFGN
Sbjct: 424 GIKSSSSDLSKPYIPDYKLAFEHFCFHAASKVVLEELQKNLGLSEENMEASRMTLHRFGN 483

Query: 449 TSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVEKPER-SPWLE 505
           TSSS +WYELAY+EA   V+RGDR+WQ AFGSG KCNSVVWKA+R V+KP R +PW++
Sbjct: 484 TSSSGIWYELAYMEAKESVRRGDRVWQIAFGSGFKCNSVVWKAMRKVKKPTRNNPWVD 541
Contributes to cuticular wax and suberin biosynthesis. Prevents the postgenital fusion of epiderm cells in organs in contact, as well as ectopic pollen hydration and germination. Required during ovules formation. May regulates an epidermis-specific developmental program during gynoecial ontogeny.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -
>sp|Q9SUY9|KCS15_ARATH 3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1 Back     alignment and function description
>sp|O48780|KCS11_ARATH 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1 Back     alignment and function description
>sp|Q9LN49|KCS4_ARATH 3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIX1|KCS9_ARATH 3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1 Back     alignment and function description
>sp|Q9XF43|KCS6_ARATH 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=1 SV=1 Back     alignment and function description
>sp|Q5XEP9|KCS17_ARATH 3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2 Back     alignment and function description
>sp|Q9MAM3|KCS1_ARATH 3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=2 SV=1 Back     alignment and function description
>sp|O65677|KCS2_ARATH Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1 Back     alignment and function description
>sp|Q9C6L5|KCS5_ARATH 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query508
255579043503 acyltransferase, putative [Ricinus commu 0.980 0.990 0.767 0.0
225465534506 PREDICTED: 3-ketoacyl-CoA synthase 10-li 0.992 0.996 0.732 0.0
356557691509 PREDICTED: 3-ketoacyl-CoA synthase 10-li 0.994 0.992 0.713 0.0
356546646535 PREDICTED: 3-ketoacyl-CoA synthase 10-li 0.994 0.943 0.709 0.0
297745105516 unnamed protein product [Vitis vinifera] 0.938 0.924 0.695 0.0
357446609505 3-ketoacyl-CoA synthase [Medicago trunca 0.986 0.992 0.699 0.0
116787763530 unknown [Picea sitchensis] 0.994 0.952 0.601 0.0
449447191531 PREDICTED: 3-ketoacyl-CoA synthase 10-li 0.994 0.951 0.586 0.0
18447765535 fiddlehead-like protein [Gossypium hirsu 0.994 0.943 0.593 0.0
449522734531 PREDICTED: 3-ketoacyl-CoA synthase 10-li 0.994 0.951 0.584 0.0
>gi|255579043|ref|XP_002530372.1| acyltransferase, putative [Ricinus communis] gi|223530089|gb|EEF32005.1| acyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  818 bits (2114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/503 (76%), Positives = 441/503 (87%), Gaps = 5/503 (0%)

Query: 2   AREHELLSPEIVNRGVENSGPYAGSLSFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHGV 61
           ARE +LLS EIVNRG+E     AGSL+FSVRV+RRLPDFLNSVNLKYV+LGY YLLSH  
Sbjct: 6   AREQDLLSTEIVNRGIE-----AGSLNFSVRVRRRLPDFLNSVNLKYVKLGYAYLLSHSF 60

Query: 62  YLIPAPILIVIFGAQIGKLTFSDLLPTFDTTDAVFLFGLLGILAYIYLETTPCWIYLVDF 121
           Y + APILI+IF   +GK+T+ D  P  D  DA+FL G+L ++ YIYL+ TP   +LVDF
Sbjct: 61  YFLSAPILILIFSVALGKVTWEDFCPKCDPIDALFLLGVLALIIYIYLDLTPTSTFLVDF 120

Query: 122 ACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRP 181
           AC+RPP+ LKISK+EFI+ AR+SG F+  ++EF+QR +KNSG+GDETY+PR+VF PG++ 
Sbjct: 121 ACFRPPDHLKISKEEFIQLARKSGKFDQTAIEFQQRALKNSGIGDETYMPRSVFQPGFKT 180

Query: 182 NLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHN 241
           NLKDGREEAAMV+FGA+DDLLA TK+R KDIR+LVVNCG+LNTTPSLSAMVINHYKLRHN
Sbjct: 181 NLKDGREEAAMVIFGAVDDLLATTKVRTKDIRILVVNCGILNTTPSLSAMVINHYKLRHN 240

Query: 242 INSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFF 301
           INSFNLGGMGC+AGI+AIDLA+DLLNAYPGSYALVVSTEVVS TWY G + DMLLPN FF
Sbjct: 241 INSFNLGGMGCAAGIVAIDLARDLLNAYPGSYALVVSTEVVSYTWYSGIDQDMLLPNFFF 300

Query: 302 RMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMI 361
           RMGAAA+LLSS RLD+WRSKYE KQLVRTHKGMDNRSFK +HLKED EGRQGLSVSK++I
Sbjct: 301 RMGAAAMLLSSRRLDRWRSKYELKQLVRTHKGMDNRSFKSIHLKEDKEGRQGLSVSKEVI 360

Query: 362 EVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKV 421
           EV GHALKANITTLGPLVLPVSEQV FFTNLL KKKTKPYIPDYK AFEH+CI A SKK 
Sbjct: 361 EVAGHALKANITTLGPLVLPVSEQVQFFTNLLFKKKTKPYIPDYKLAFEHVCIYAASKKG 420

Query: 422 LDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSG 481
           LDE+QKNLELT+E M+ASRKTL+RFGNTSSSS+WYELAYLEAN  +KRGDRIWQ AFGSG
Sbjct: 421 LDELQKNLELTDEYMDASRKTLQRFGNTSSSSIWYELAYLEANGKIKRGDRIWQIAFGSG 480

Query: 482 VKCNSVVWKALRNVEKPERSPWL 504
            KCNSVVWKAL+ V KP+RSPW+
Sbjct: 481 FKCNSVVWKALKTVGKPKRSPWI 503

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225465534|ref|XP_002273798.1| PREDICTED: 3-ketoacyl-CoA synthase 10-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356557691|ref|XP_003547147.1| PREDICTED: 3-ketoacyl-CoA synthase 10-like [Glycine max] Back     alignment and taxonomy information
>gi|356546646|ref|XP_003541735.1| PREDICTED: 3-ketoacyl-CoA synthase 10-like [Glycine max] Back     alignment and taxonomy information
>gi|297745105|emb|CBI38944.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357446609|ref|XP_003593580.1| 3-ketoacyl-CoA synthase [Medicago truncatula] gi|355482628|gb|AES63831.1| 3-ketoacyl-CoA synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|116787763|gb|ABK24632.1| unknown [Picea sitchensis] Back     alignment and taxonomy information
>gi|449447191|ref|XP_004141352.1| PREDICTED: 3-ketoacyl-CoA synthase 10-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|18447765|gb|AAL67993.1| fiddlehead-like protein [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|449522734|ref|XP_004168381.1| PREDICTED: 3-ketoacyl-CoA synthase 10-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query508
TAIR|locus:2083825451 KCS15 "3-ketoacyl-CoA synthase 0.645 0.727 0.616 1.6e-147
TAIR|locus:2043849509 KCS11 "3-ketoacyl-CoA synthase 0.925 0.923 0.534 1.8e-133
TAIR|locus:2016397516 KCS4 "3-ketoacyl-CoA synthase 0.940 0.926 0.508 4.8e-133
TAIR|locus:2042684512 KCS9 "3-ketoacyl-CoA synthase 0.923 0.916 0.513 6.2e-133
TAIR|locus:2170837529 KCS20 "3-ketoacyl-CoA synthase 0.921 0.884 0.515 7.8e-126
TAIR|locus:2201262497 KCS6 "3-ketoacyl-CoA synthase 0.923 0.943 0.492 1.6e-125
TAIR|locus:2020215528 KCS2 "3-ketoacyl-CoA synthase 0.927 0.892 0.509 2.1e-125
TAIR|locus:2200955528 KCS1 "3-ketoacyl-CoA synthase 0.938 0.903 0.497 1.7e-123
TAIR|locus:2139579487 KCS17 "3-ketoacyl-CoA synthase 0.895 0.934 0.496 1.9e-122
TAIR|locus:2031260492 KCS5 "3-ketoacyl-CoA synthase 0.929 0.959 0.481 5.1e-122
TAIR|locus:2083825 KCS15 "3-ketoacyl-CoA synthase 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1071 (382.1 bits), Expect = 1.6e-147, Sum P(2) = 1.6e-147
 Identities = 211/342 (61%), Positives = 268/342 (78%)

Query:    38 PDFLNSVNLKYVRLGYGYLLSHG-VYLIPAPILIVIFGAQIGKLTFSDLLPTFDTTDAVF 96
             PDFL   NL+YV+LGY YLLS    +    P L+++F      +  S  LP      + F
Sbjct:    22 PDFLG-YNLRYVKLGYIYLLSLSRTFCFFLPPLLLLF------IFVSRFLPILAFPLSTF 74

Query:    97 LFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQ 156
                   +L Y YL  TP  ++L+DF+CYRPP+ LKI+K +FIE A +SGNFN+ ++E ++
Sbjct:    75 FI----LLIYHYL--TPSSVFLLDFSCYRPPDHLKITKSDFIELAMKSGNFNETAIELQR 128

Query:   157 RIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLV 216
             +++  SG+G+E+Y+PR VF PG+R NL+DGREEAAMV+FGAID+LLAATKI  K I++LV
Sbjct:   129 KVLDQSGIGEESYMPRVVFKPGHRVNLRDGREEAAMVIFGAIDELLAATKINVKHIKILV 188

Query:   217 VNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALV 276
             +NCGVLNTTPSLSAMVINHYKLRHN  S+NLGGMGCSAG+IAIDLAKDLLNA+ GSYALV
Sbjct:   189 LNCGVLNTTPSLSAMVINHYKLRHNTESYNLGGMGCSAGVIAIDLAKDLLNAHQGSYALV 248

Query:   277 VSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDN 336
             VSTE+VS TWY GN+V +L PNCFFRMGAAAV+LSS R+D+WR+KY+  QLVRTHKGM++
Sbjct:   249 VSTEIVSFTWYSGNDVALLPPNCFFRMGAAAVMLSSRRIDRWRAKYQLMQLVRTHKGMED 308

Query:   337 RSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPL 378
              S+K + L+ED +G+QGL VS+D++EVG HALKANI TLG L
Sbjct:   309 TSYKSIELREDRDGKQGLYVSRDVMEVGRHALKANIATLGRL 350
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0006633 "fatty acid biosynthetic process" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0008610 "lipid biosynthetic process" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016746 "transferase activity, transferring acyl groups" evidence=ISS
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
GO:0010584 "pollen exine formation" evidence=RCA
TAIR|locus:2043849 KCS11 "3-ketoacyl-CoA synthase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016397 KCS4 "3-ketoacyl-CoA synthase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042684 KCS9 "3-ketoacyl-CoA synthase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170837 KCS20 "3-ketoacyl-CoA synthase 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201262 KCS6 "3-ketoacyl-CoA synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020215 KCS2 "3-ketoacyl-CoA synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200955 KCS1 "3-ketoacyl-CoA synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139579 KCS17 "3-ketoacyl-CoA synthase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031260 KCS5 "3-ketoacyl-CoA synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q570B4KCS10_ARATH2, ., 3, ., 1, ., -0.55570.99210.9163yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.963
3rd Layer2.3.1.1190.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
PLN02192511 PLN02192, PLN02192, 3-ketoacyl-CoA synthase 0.0
PLN02854521 PLN02854, PLN02854, 3-ketoacyl-CoA synthase 0.0
PLN02377502 PLN02377, PLN02377, 3-ketoacyl-CoA synthase 0.0
pfam08392290 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketid 1e-155
PLN02932478 PLN02932, PLN02932, 3-ketoacyl-CoA synthase 1e-152
PLN00415466 PLN00415, PLN00415, 3-ketoacyl-CoA synthase 1e-144
cd00831361 cd00831, CHS_like, Chalcone and stilbene synthases 1e-119
COG3424356 COG3424, BcsA, Predicted naringenin-chalcone synth 2e-25
cd00827324 cd00827, init_cond_enzymes, "initiating" condensin 9e-15
COG0332323 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] 1e-13
cd00830320 cd00830, KAS_III, Ketoacyl-acyl carrier protein sy 2e-10
TIGR00747318 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) 3e-10
pfam0854190 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- 9e-08
PLN03170401 PLN03170, PLN03170, chalcone synthase; Provisional 2e-07
PLN03172393 PLN03172, PLN03172, chalcone synthase family prote 4e-07
PLN03173391 PLN03173, PLN03173, chalcone synthase; Provisional 6e-07
pfam00195227 pfam00195, Chal_sti_synt_N, Chalcone and stilbene 6e-06
PLN03169391 PLN03169, PLN03169, chalcone synthase family prote 6e-06
PRK12879325 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei 9e-06
PLN03171399 PLN03171, PLN03171, chalcone synthase-like protein 3e-05
PLN03168389 PLN03168, PLN03168, chalcone synthase; Provisional 7e-05
PRK09352319 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei 1e-04
pfam0854580 pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-pr 2e-04
pfam02797151 pfam02797, Chal_sti_synt_C, Chalcone and stilbene 8e-04
>gnl|CDD|215123 PLN02192, PLN02192, 3-ketoacyl-CoA synthase Back     alignment and domain information 
 Score =  583 bits (1505), Expect = 0.0
 Identities = 263/481 (54%), Positives = 347/481 (72%), Gaps = 11/481 (2%)

Query: 35  RRLPDFLNSVNLKYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLP-----TF 89
           R+LPDF  SV LKYV+LGY YL++HG+YL  +P+++VI  AQ+   +  DL        F
Sbjct: 17  RKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVI-AAQLSTFSIQDLHDLWEHLKF 75

Query: 90  DTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFND 149
           +    +    LL  L+ +Y  T P  +YLVDF+CY+P +  K ++K F+++++ +G+F +
Sbjct: 76  NLISVILCSTLLVFLSTLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTE 135

Query: 150 ASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRP 209
            +LEF+++I++ SGLG+ TYLP AV      P + + R+EA  V+FGAID LLA T ++P
Sbjct: 136 ENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEARKEAETVMFGAIDQLLAKTSVKP 195

Query: 210 KDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269
           KDI +L+VNC + N TPSLSAMVINHYKLR NI S+NLGGMGCSAG+I+IDLAK LL  +
Sbjct: 196 KDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVH 255

Query: 270 PGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVR 329
           P SYALV+S E ++  WY GN+  ML+ NC FRMG AA+LLS+ R D+ RSKY+    VR
Sbjct: 256 PNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVR 315

Query: 330 THKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFF 389
           THKG D++ F C+  +ED+ G+ G+S+SKD++ V G ALK NITTLGPLVLP+SEQ+ FF
Sbjct: 316 THKGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFF 375

Query: 390 TNL----LLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLER 445
             L    L K K KPYIPD+K AFEH CI A  + VLDE++KNL+L++  ME SR TL R
Sbjct: 376 ATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYR 435

Query: 446 FGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVE-KPERSPWL 504
           FGNTSSSS+WYELAY EA   +K+GDR WQ AFGSG KCNS VWKALR V    E++PW+
Sbjct: 436 FGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEKNPWM 495

Query: 505 E 505
           +
Sbjct: 496 D 496

Length = 511
>gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|116972 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketide synthase-like protein Back     alignment and domain information
>gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Back     alignment and domain information
>gnl|CDD|178714 PLN03170, PLN03170, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|178717 PLN03173, PLN03173, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|201072 pfam00195, Chal_sti_synt_N, Chalcone and stilbene synthases, N-terminal domain Back     alignment and domain information
>gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|178715 PLN03171, PLN03171, chalcone synthase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|178712 PLN03168, PLN03168, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|203976 pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Back     alignment and domain information
>gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 508
PLN02854521 3-ketoacyl-CoA synthase 100.0
PLN02192511 3-ketoacyl-CoA synthase 100.0
PLN02377502 3-ketoacyl-CoA synthase 100.0
PLN02932478 3-ketoacyl-CoA synthase 100.0
PLN00415466 3-ketoacyl-CoA synthase 100.0
PF08392290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 100.0
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 100.0
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 100.0
PLN03172393 chalcone synthase family protein; Provisional 100.0
PLN03169391 chalcone synthase family protein; Provisional 100.0
PLN03168389 chalcone synthase; Provisional 100.0
PLN03173391 chalcone synthase; Provisional 100.0
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PLN03171399 chalcone synthase-like protein; Provisional 100.0
PLN03170401 chalcone synthase; Provisional 100.0
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 100.0
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 100.0
COG3424356 BcsA Predicted naringenin-chalcone synthase [Secon 100.0
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06840339 hypothetical protein; Validated 100.0
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 100.0
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 100.0
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK04262347 hypothetical protein; Provisional 100.0
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 100.0
cd00827324 init_cond_enzymes "initiating" condensing enzymes 100.0
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 100.0
PLN02577459 hydroxymethylglutaryl-CoA synthase 100.0
TIGR01833454 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth 100.0
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 100.0
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 99.97
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 99.96
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 99.94
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 99.83
PF02797151 Chal_sti_synt_C: Chalcone and stilbene synthases, 99.81
PF01154174 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s 99.77
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 99.75
KOG1393462 consensus Hydroxymethylglutaryl-CoA synthase [Lipi 99.71
TIGR02845327 spore_V_AD stage V sporulation protein AD. Bacillu 99.71
cd00834406 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) 99.63
PRK08304337 stage V sporulation protein AD; Validated 99.58
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 99.58
smart00825424 PKS_KS Beta-ketoacyl synthase. The structure of be 99.52
TIGR01930386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 99.52
PRK05656393 acetyl-CoA acetyltransferase; Provisional 99.51
PRK09051394 beta-ketothiolase; Provisional 99.51
PRK06064389 acetyl-CoA acetyltransferase; Provisional 99.48
TIGR03150407 fabF beta-ketoacyl-acyl-carrier-protein synthase I 99.46
PRK07108392 acetyl-CoA acetyltransferase; Provisional 99.46
PRK09052399 acetyl-CoA acetyltransferase; Provisional 99.46
PRK06501425 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.46
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 99.45
cd00828407 elong_cond_enzymes "elongating" condensing enzymes 99.45
PRK08313386 acetyl-CoA acetyltransferase; Provisional 99.43
PF0854580 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) 99.42
PRK12578385 acetyl-CoA acetyltransferase; Provisional 99.42
PRK07314411 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.41
PRK08242402 acetyl-CoA acetyltransferase; Validated 99.41
PRK08235393 acetyl-CoA acetyltransferase; Provisional 99.4
PRK06205404 acetyl-CoA acetyltransferase; Provisional 99.39
PRK05790393 putative acyltransferase; Provisional 99.39
PRK06059399 lipid-transfer protein; Provisional 99.38
cd00833421 PKS polyketide synthases (PKSs) polymerize simple 99.36
PRK06954397 acetyl-CoA acetyltransferase; Provisional 99.36
PRK06445394 acetyl-CoA acetyltransferase; Provisional 99.35
PRK06025417 acetyl-CoA acetyltransferase; Provisional 99.34
PRK08722414 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.34
PRK07661391 acetyl-CoA acetyltransferase; Provisional 99.33
PRK07103410 polyketide beta-ketoacyl:acyl carrier protein synt 99.32
PRK06333424 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.32
PRK12404334 stage V sporulation protein AD; Provisional 99.27
PRK06158384 thiolase; Provisional 99.27
PRK06690361 acetyl-CoA acetyltransferase; Provisional 99.26
PLN02287452 3-ketoacyl-CoA thiolase 99.26
PRK05952381 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.25
PRK06065392 acetyl-CoA acetyltransferase; Provisional 99.25
PRK08256391 lipid-transfer protein; Provisional 99.22
PRK07851406 acetyl-CoA acetyltransferase; Provisional 99.22
PLN02644394 acetyl-CoA C-acetyltransferase 99.22
PRK07516389 acetyl-CoA acetyltransferase; Provisional 99.22
PRK06633392 acetyl-CoA acetyltransferase; Provisional 99.2
PRK07850387 acetyl-CoA acetyltransferase; Provisional 99.19
PRK09116405 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.19
PRK09185392 3-oxoacyl-(acyl carrier protein) synthase I; Revie 99.19
PLN02787540 3-oxoacyl-[acyl-carrier-protein] synthase II 99.19
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 99.19
PRK08439406 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.18
PLN02836437 3-oxoacyl-[acyl-carrier-protein] synthase 99.18
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 99.17
cd00832399 CLF Chain-length factor (CLF) is a factor required 99.17
PRK06289403 acetyl-CoA acetyltransferase; Provisional 99.15
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 99.15
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 99.13
PRK06504390 acetyl-CoA acetyltransferase; Provisional 99.13
PRK07801382 acetyl-CoA acetyltransferase; Provisional 99.11
PTZ00050421 3-oxoacyl-acyl carrier protein synthase; Provision 99.1
PRK07910418 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.1
TIGR02446430 FadI fatty oxidation complex, beta subunit FadI. T 99.07
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 99.05
PRK06519398 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.01
PRK14691342 3-oxoacyl-(acyl carrier protein) synthase II; Prov 98.99
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 98.98
PRK07967406 3-oxoacyl-(acyl carrier protein) synthase I; Revie 98.98
PRK08170426 acetyl-CoA acetyltransferase; Provisional 98.96
cd00826393 nondecarbox_cond_enzymes nondecarboxylating conden 98.9
PRK08142388 acetyl-CoA acetyltransferase; Provisional 98.89
PF00108264 Thiolase_N: Thiolase, N-terminal domain; InterPro: 98.88
PRK08257 498 acetyl-CoA acetyltransferase; Validated 98.88
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 98.77
PF00109254 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal 98.76
COG0304412 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li 98.72
PRK06066385 acetyl-CoA acetyltransferase; Provisional 98.71
PRK08131401 acetyl-CoA acetyltransferase; Provisional 98.66
PRK06366388 acetyl-CoA acetyltransferase; Provisional 98.64
PRK06157398 acetyl-CoA acetyltransferase; Validated 98.55
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 98.54
PRK06365430 acetyl-CoA acetyltransferase; Provisional 98.49
PRK07937352 lipid-transfer protein; Provisional 98.48
PRK09268427 acetyl-CoA acetyltransferase; Provisional 98.43
PF07451329 SpoVAD: Stage V sporulation protein AD (SpoVAD); I 98.36
KOG1390396 consensus Acetyl-CoA acetyltransferase [Lipid tran 98.26
KOG1389435 consensus 3-oxoacyl CoA thiolase [Lipid transport 98.26
COG3321 1061 Polyketide synthase modules and related proteins [ 98.12
PRK07855386 lipid-transfer protein; Provisional 98.01
KOG1394440 consensus 3-oxoacyl-(acyl-carrier-protein) synthas 97.96
COG0183392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 97.65
PF08540282 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s 97.33
KOG1406408 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 96.93
KOG1391396 consensus Acetyl-CoA acetyltransferase [Lipid tran 95.74
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 94.35
KOG1392465 consensus Acetyl-CoA acetyltransferase [Lipid tran 94.25
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 93.68
PRK06025417 acetyl-CoA acetyltransferase; Provisional 93.2
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 93.16
PF13723218 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina 92.89
KOG1202 2376 consensus Animal-type fatty acid synthase and rela 92.16
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 92.08
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 92.06
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 91.36
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 91.22
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 90.2
PRK04262347 hypothetical protein; Provisional 90.02
PRK06366388 acetyl-CoA acetyltransferase; Provisional 89.88
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 89.79
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 89.77
PRK06840339 hypothetical protein; Validated 89.35
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 88.87
PRK08131401 acetyl-CoA acetyltransferase; Provisional 88.83
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 88.34
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 88.23
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 88.16
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 87.77
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 87.46
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 87.23
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 87.05
PRK08242402 acetyl-CoA acetyltransferase; Validated 86.87
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 85.37
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 84.69
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 84.3
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 83.32
PRK08170426 acetyl-CoA acetyltransferase; Provisional 82.95
PRK09052399 acetyl-CoA acetyltransferase; Provisional 82.81
PRK07850387 acetyl-CoA acetyltransferase; Provisional 82.15
PRK06205404 acetyl-CoA acetyltransferase; Provisional 82.06
PRK05656393 acetyl-CoA acetyltransferase; Provisional 81.72
PRK09051394 beta-ketothiolase; Provisional 81.4
PRK06445394 acetyl-CoA acetyltransferase; Provisional 81.3
COG1214220 Inactive homolog of metal-dependent proteases, put 80.79
PRK06690361 acetyl-CoA acetyltransferase; Provisional 80.52
PRK06954397 acetyl-CoA acetyltransferase; Provisional 80.4
PLN02287452 3-ketoacyl-CoA thiolase 80.36
PRK07851406 acetyl-CoA acetyltransferase; Provisional 80.1
>PLN02854 3-ketoacyl-CoA synthase Back     alignment and domain information 
Probab=100.00  E-value=1.1e-113  Score=918.78  Aligned_cols=480  Identities=53%  Similarity=0.908  Sum_probs=453.0

Q ss_pred             cceecccccCCccccccchhhHHhhhhHHHHhH---HHHhHHHHHHHHHHHHhcccCcccc---cCc----CChhHHHHH
Q 038123           28 SFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHG---VYLIPAPILIVIFGAQIGKLTFSDL---LPT----FDTTDAVFL   97 (508)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~   97 (508)
                      .+++++|++||||++|||+||||+||||+++|+   ++++++|++ ++++.++++++++|+   |..    +++++++++
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (521)
T PLN02854         17 SAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLT-IATLVQITGLEFDTVSELWSNQALHLDTATRLTG   95 (521)
T ss_pred             ceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHhhhHHhHHHHHHH
Confidence            566788999999999999999999999999999   677889987 677888999998884   643    567888888


Q ss_pred             HHHHHHHHHHHHhcCCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCC
Q 038123           98 FGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCP  177 (508)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~  177 (508)
                      ++++++++++|+|+||++|||+||+||+|+++++++.+.|+|++...|.|++++++||+||++|||||++||+|+..++.
T Consensus        96 ~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~  175 (521)
T PLN02854         96 SAFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSR  175 (521)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCC
Confidence            88888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHH
Q 038123          178 GYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGII  257 (508)
Q Consensus       178 ~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~  257 (508)
                      |++.+|+++|+|++++++.|++++|+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++
T Consensus       176 ~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~  255 (521)
T PLN02854        176 PPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLI  255 (521)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999899999999999999999


Q ss_pred             HHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCc
Q 038123          258 AIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNR  337 (508)
Q Consensus       258 AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~  337 (508)
                      ||++|+++|+++++++||||++|.+|.+||.++||++++++++|||||||+||++++.++++++|+|.++++++.++|++
T Consensus       256 aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~  335 (521)
T PLN02854        256 SIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDK  335 (521)
T ss_pred             HHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCC
Confidence            99999999999999999999999999999999999999999999999999999997654456789999999999999999


Q ss_pred             cccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHH----HHHHhcCCCCCcccccccccEEE
Q 038123          338 SFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFT----NLLLKKKTKPYIPDYKQAFEHIC  413 (508)
Q Consensus       338 ~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~----~~l~~~gl~~y~pd~~~did~f~  413 (508)
                      .|+|+++++|+.|..|+++++++|.+++++++.+++++||.|+|++|+++|+.    +.|.++|+++|+|||++||||||
T Consensus       336 ~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~  415 (521)
T PLN02854        336 NYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFC  415 (521)
T ss_pred             ccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEE
Confidence            99999999988888888999999988899999999999999999999887544    55666799999999999999999


Q ss_pred             EcCCCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEec
Q 038123          414 ILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALR  493 (508)
Q Consensus       414 ~Hq~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~~  493 (508)
                      +||+|++++|.++++||+++++.++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++||||+|
T Consensus       416 iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~  495 (521)
T PLN02854        416 IHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALR  495 (521)
T ss_pred             ECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCC--CCCCCCcCCC
Q 038123          494 NVEKP--ERSPWLESSE  508 (508)
Q Consensus       494 ~~~~~--~~~~w~~~~~  508 (508)
                      +++++  .+|||+||||
T Consensus       496 ~~~~~~~~~~~w~~~i~  512 (521)
T PLN02854        496 EIPTGESTGNPWADSID  512 (521)
T ss_pred             cCCccccCCCCchhhHh
Confidence            99865  6799999998

>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN03171 chalcone synthase-like protein; Provisional Back     alignment and domain information
>PLN03170 chalcone synthase; Provisional Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PLN02577 hydroxymethylglutaryl-CoA synthase Back     alignment and domain information
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR02845 spore_V_AD stage V sporulation protein AD Back     alignment and domain information
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>PRK08304 stage V sporulation protein AD; Validated Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>smart00825 PKS_KS Beta-ketoacyl synthase Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>PRK08313 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK12404 stage V sporulation protein AD; Provisional Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>PRK06289 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK08142 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK06066 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long Back     alignment and domain information
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] Back     alignment and domain information
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
1u0m_A382 Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen 8e-12
1qlv_A402 Pyrone Synthase (Pys) From Gerbera Hybrida Length = 7e-08
1u0v_A393 An Aldol Switch Discovered In Stilbene Synthases Me 7e-08
1cgz_A389 Chalcone Synthase From Alfalfa Complexed With Resve 1e-07
3awj_A402 Crystal Structure Of The Huperzia Serrata Polyketid 2e-07
1z1e_A390 Crystal Structure Of Stilbene Synthase From Arachis 2e-06
1cml_A389 Chalcone Synthase From Alfalfa Complexed With Malon 2e-06
1chw_A389 Chalcone Synthase From Alfalfa Complexed With Hexan 2e-06
1d6i_A388 Chalcone Synthase (H303q Mutant) Length = 388 2e-06
1bq6_A388 Chalcone Synthase From Alfalfa With Coenzyme A Leng 3e-06
1bi5_A389 Chalcone Synthase From Alfalfa Length = 389 3e-06
1i89_A389 Chalcone Synthase (G256l) Length = 389 6e-06
3a5s_A387 Benzalacetone Synthase (I207lL208F) Length = 387 7e-06
1i88_A389 Chalcone Synthase (G256v) Length = 389 8e-06
1i86_A389 Chalcone Synthase, G256a Mutant Length = 389 1e-05
1i8b_A389 Chalcone Synthase (g256f) Length = 389 1e-05
1d6h_A387 Chalone Synthase (N336a Mutant Complexed With Coa) 2e-05
1jwx_A389 Chalcone Synthase--F215s Mutant Length = 389 3e-05
3a5q_A387 Benzalacetone Synthase From Rheum Palmatum Length = 5e-05
1ted_A393 Crystal Structure Of A Type Iii Polyketide Synthase 8e-05
2p0u_A413 Crystal Structure Of Marchantia Polymorpha Stilbene 1e-04
3tsy_A979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 1e-04
1tee_A393 Crystal Structure Of C205f Mutant Of Pks18 From Myc 2e-04
3ale_A416 A Type Iii Polyketide Synthase That Produces Diaryl 2e-04
3oit_A387 Crystal Structure Of Curcuminoid Synthase Cus From 2e-04
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 Back     alignment and structure 
Iteration: 1

 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 141/379 (37%), Gaps = 79/379 (20%)
Query: 129 ELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETY---LPRAVFCPGYRPNLKD 185
           E  I+ +E +E AR   + +   L    R+I+N+G+        +   +  PG+    K 
Sbjct: 21  EHVITMEETLELARRR-HTDHPQLPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKV 79
Query: 186 GREEAAMVLFGAIDDLLAATKIRPKDIRVLV-VNCGVLNTTPSLSAMVINHYKLRHNINS 244
              EA   +   I   L   ++   DI V++ V+C      PSL+A +IN          
Sbjct: 80  YEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGF-MMPSLTAWLINEMGFDSTTRQ 138
Query: 245 FNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGN-EVDMLLPNCFFRM 303
             +  +GC+AG  AI+ A D   AYP + AL+V+ E  S  +   +  V  LL N  F  
Sbjct: 139 IPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCYQPTDLGVGSLLCNGLFGD 198
Query: 304 GAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEV 363
           G AA ++                                       GR G  V       
Sbjct: 199 GIAAAVV--------------------------------------RGRGGTGVR------ 214
Query: 364 GGHALKANITTLGPLVLPVSEQ----------VHFFTNXXXXXXTKPYIPDYKQ-AFEH- 411
               L+ N    G  ++P +E            HF  +       +P  P  K+ A EH 
Sbjct: 215 ----LERN----GSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAPALKELAGEHG 266
Query: 412 --------ICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA 463
                     + A   ++LD++   LE+       SR TL  +GN +S+ V   L  L  
Sbjct: 267 WDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFD 326
Query: 464 NAGVKRGDRIWQTAFGSGV 482
             GV+ G R     FG G+
Sbjct: 327 EGGVEEGARGLLAGFGPGI 345
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida Length = 402 Back     alignment and structure
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Of Specificity Of Type Iii Polyketide Synthases: 18xchs Structure Length = 393 Back     alignment and structure
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389 Back     alignment and structure
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402 Back     alignment and structure
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390 Back     alignment and structure
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa Length = 389 Back     alignment and structure
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa Length = 389 Back     alignment and structure
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant) Length = 388 Back     alignment and structure
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A Length = 388 Back     alignment and structure
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa Length = 389 Back     alignment and structure
>pdb|1I89|A Chain A, Chalcone Synthase (G256l) Length = 389 Back     alignment and structure
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F) Length = 387 Back     alignment and structure
>pdb|1I88|A Chain A, Chalcone Synthase (G256v) Length = 389 Back     alignment and structure
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant Length = 389 Back     alignment and structure
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f) Length = 389 Back     alignment and structure
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa) Length = 387 Back     alignment and structure
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant Length = 389 Back     alignment and structure
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum Length = 387 Back     alignment and structure
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha Stilbenecarboxylate Synthase 2 (Stcs2) Length = 413 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces Diarylheptanoid Length = 416 Back     alignment and structure
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza Sativa Length = 387 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 1e-100
3oit_A387 OS07G0271500 protein; type III polyketide synthase 4e-90
3awk_A402 Chalcone synthase-like polyketide synthase; type I 3e-69
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 5e-63
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 2e-59
3v7i_A413 Putative polyketide synthase; type III polyketide 2e-54
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 4e-53
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 9e-51
1xes_A413 Dihydropinosylvin synthase; native structure, tran 2e-49
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 3e-44
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 1e-42
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 2e-40
1u0m_A382 Putative polyketide synthase; type III polyketide 1e-33
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 3e-30
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 6e-28
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 1e-08
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 2e-08
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 9e-08
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 1e-06
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 1e-05
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 1e-05
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 4e-05
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 6e-05
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 6e-04
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 7e-04
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 7e-04
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 8e-04
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 Back     alignment and structure
 Score =  305 bits (784), Expect = e-100
 Identities = 69/376 (18%), Positives = 127/376 (33%), Gaps = 35/376 (9%)

Query: 126 PPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSG-----LGDETYLPRAVFCPGYR 180
           P     IS++   +      +    + E  +RI + S      L  +   P       + 
Sbjct: 24  PGE--PISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHL 81

Query: 181 PNLKDG----REEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHY 236
             + D     ++    +   A    L        DI  +V         P ++  +I+  
Sbjct: 82  ETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLL 141

Query: 237 KLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLL 296
            L  ++   +L  MGC AG+ ++  A  L  A P +  LVV TEV S  +   +  D ++
Sbjct: 142 GLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGGDQMV 201

Query: 297 PNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSV 356
            +  F  G+AA ++      +    YE    +         +   M    + EG   L +
Sbjct: 202 ASSIFADGSAAYIIGCNPRIEETPLYEVMCSINRSFP---NTENAMVWDLEKEG-WNLGL 257

Query: 357 SKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILA 416
              +  V G  ++A + T                   L+  T     D         I  
Sbjct: 258 DASIPIVIGSGIEAFVDT-------------LLDKAKLQTSTAISAKDC-----EFLIHT 299

Query: 417 TSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQT 476
             K +L  I+ +L +  +  + +      +GN SS+SV + + +   +            
Sbjct: 300 GGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSK--SLPTYSISL 357

Query: 477 AFGSGVKCNSVVWKAL 492
           AFG G+       K +
Sbjct: 358 AFGPGLAFEGCFLKNV 373
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Length = 478 Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359 Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Length = 354 Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Length = 450 Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339 Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Length = 365 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query508
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 100.0
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 100.0
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 100.0
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 100.0
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 100.0
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 100.0
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 100.0
3oit_A387 OS07G0271500 protein; type III polyketide synthase 100.0
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 100.0
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 100.0
3v7i_A413 Putative polyketide synthase; type III polyketide 100.0
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 100.0
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 100.0
3awk_A402 Chalcone synthase-like polyketide synthase; type I 100.0
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 100.0
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 100.0
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 100.0
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 100.0
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 100.0
1xes_A413 Dihydropinosylvin synthase; native structure, tran 100.0
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 100.0
1u0m_A382 Putative polyketide synthase; type III polyketide 100.0
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 100.0
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 100.0
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 100.0
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 100.0
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 100.0
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 100.0
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 100.0
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 100.0
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 100.0
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 100.0
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 100.0
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 100.0
2wya_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 99.89
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 99.8
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 99.79
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 99.79
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 99.79
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 99.79
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 99.78
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 99.78
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 99.77
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 99.76
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 99.74
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 99.73
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 99.72
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 99.71
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 99.7
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 99.7
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 99.69
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 99.69
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 99.68
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 99.67
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 99.66
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 99.66
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 99.66
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 99.65
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 99.65
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 99.62
1afw_A393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 99.62
2ib8_A395 Acetyl-COA acetyltransferase; thiolase fold, potas 99.61
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 99.6
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 99.58
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 99.58
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 99.53
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 99.49
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 99.46
4egv_A 520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 99.19
3zen_D3089 Fatty acid synthase; transferase, mycolic acid bio 98.98
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 98.66
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 98.38
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 98.17
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 98.12
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 92.99
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 92.95
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 92.54
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 92.25
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 91.77
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 91.73
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 91.26
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 91.24
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 90.98
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 90.91
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 90.81
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 90.7
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 90.65
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 90.1
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 90.01
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 88.39
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 87.95
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 87.29
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 87.02
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 86.96
1u0m_A382 Putative polyketide synthase; type III polyketide 86.37
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 86.25
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 85.65
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 83.15
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 82.98
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 81.66
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
Probab=100.00  E-value=3.1e-58  Score=475.41  Aligned_cols=329  Identities=18%  Similarity=0.256  Sum_probs=266.3

Q ss_pred             cCCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHH
Q 038123          111 TTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEA  190 (508)
Q Consensus       111 ~~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea  190 (508)
                      .||...+|+++|+|+|+  ++|+|+|+.+.++.    +++      +|.+|+||++|+++.+++.              +
T Consensus         9 ~~~~~srI~g~g~ylP~--~~v~n~el~~~~~~----~~e------~I~~rtGI~~R~~a~~~e~--------------~   62 (350)
T 4ewp_A            9 ERPAASRIVAVGAYRPA--NLVPNEDLIGPIDS----SDE------WIRQRTGIVTRQRATAEET--------------V   62 (350)
T ss_dssp             CCCSEEEEEEEEEECCS--CEEEHHHHTTTTTC----CHH------HHHHHHCCSEEECCCSSCC--------------H
T ss_pred             cCCCCCEEEEEEEEcCC--CeEcHHHHHHHhCC----CHH------HHHhccCceEEEEcCCCCC--------------H
Confidence            47788899999999999  79999999876642    554      6899999999999887753              7


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123          191 AMVLFGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY  269 (508)
Q Consensus       191 ~~la~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g  269 (508)
                      .+|+++|+++||+++|++|+|||+||++| +++++.|+++++|+++||++ ++.+||++ +||+|+++||++|.++++++
T Consensus        63 ~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~-~~C~g~~~aL~~A~~~i~~g  140 (350)
T 4ewp_A           63 PVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVS-AACAGYCYGVAQADALVRSG  140 (350)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEE-CGGGHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEee-cchhhHHHHHHHhhhhhhCC
Confidence            89999999999999999999999999986 67789999999999999998 67899999 69999999999999999999


Q ss_pred             CCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCC
Q 038123          270 PGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAE  349 (508)
Q Consensus       270 ~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~  349 (508)
                      +.++||||++|.+|. +.++.+|.   +..+|||||+|++|++.+...         +.....++|++.++.+..+.++.
T Consensus       141 ~~~~~Lvv~~E~~s~-~~d~~~~~---~~~lfgDGA~A~vl~~~~~~~---------~~~~~~~sdg~~~~~~~~~~~~~  207 (350)
T 4ewp_A          141 TARHVLVVGVERLSD-VVDPTDRS---ISFLLGDGAGAVIVAASDEPG---------ISPSVWGSDGERWSTISMTHSQL  207 (350)
T ss_dssp             SCSEEEEEEEEEGGG-GCCTTCTT---TGGGBCEEEEEEEEEEESSCC---------BCCCEEEECGGGTTSEEESSCHH
T ss_pred             CccceeEeeeeecee-cccccccc---cccccccchheeeeecccCCC---------ccceeeeecccccceeeecCCcc
Confidence            999999999999997 45667777   578999999999999876431         22334556777776665543210


Q ss_pred             CCcccccchhhHHh---------hhhhhhhhHHhccCcccchhhH--HHHHHHHHHhcCCCCCcccccccccEEEEcCCC
Q 038123          350 GRQGLSVSKDMIEV---------GGHALKANITTLGPLVLPVSEQ--VHFFTNLLLKKKTKPYIPDYKQAFEHICILATS  418 (508)
Q Consensus       350 g~~g~~ls~d~~~~---------~g~al~~~i~~~g~~vlp~se~--~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~  418 (508)
                      .   ..-..+....         .......++.+.|+.|+.+.-.  -..+.++|+++|+++      +|||||++||+|
T Consensus       208 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~------~did~~v~Hq~~  278 (350)
T 4ewp_A          208 E---LRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREALDAAGVEP------EDLAAFIPHQAN  278 (350)
T ss_dssp             H---HHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHHHHHTCCG------GGEEEEEECCSC
T ss_pred             c---cCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHHHhhcCCh------hHhceEEecCCC
Confidence            0   0000000000         0000112344555555543211  135668899999998      999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEE
Q 038123          419 KKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKA  491 (508)
Q Consensus       419 ~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~  491 (508)
                      +++++.+++.||+|++++.  ..++++||||||||+|+.|++++++|++++||+|+++|||+||+|+++||||
T Consensus       279 ~~i~~~~~~~Lgl~~~~~~--~~~l~~~GNtssasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~vlr~  349 (350)
T 4ewp_A          279 MRIIDEFAKQLKLPESVVV--ARDIADAGNTSAASIPLAMHRLLEENPELSGGLALQIGFGAGLVYGAQVVRL  349 (350)
T ss_dssp             HHHHHHHHHHTTCCTTSEE--CCTHHHHCBCGGGHHHHHHHHHHHHCGGGTTSEEEEEEEETTTEEEEEEEEC
T ss_pred             HHHHHHHHHHcCcChHhEE--ecccccccchHHHHHHHHHHHHHHhCCCCCcCEEEEEEEchhhEeEEEEEEe
Confidence            9999999999999999974  3689999999999999999999999999999999999999999999999997
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Back     alignment and structure
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Back     alignment and structure
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 508
d1teda_372 c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte 1e-43
d1u0ma1200 c.95.1.2 (A:2-201) Putative polyketide synthase SC 9e-31
d1bi5a1235 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med 2e-23
d1ee0a2160 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon 1e-16
d1u0ma2148 c.95.1.2 (A:202-349) Putative polyketide synthase 1e-14
d1bi5a2154 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M 2e-13
d1u0ua2156 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S 5e-13
d1u6ea2148 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 5e-10
d1ub7a2149 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (Fa 1e-08
d1hnja2143 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 9e-08
d1mzja2153 c.95.1.2 (A:184-336) Priming beta-ketosynthase fro 4e-07
d1xpma2221 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl Co 0.001
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  156 bits (394), Expect = 1e-43
 Identities = 66/388 (17%), Positives = 139/388 (35%), Gaps = 40/388 (10%)

Query: 117 YLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFK-QRIIKNSGL---------GD 166
            +   A   P     +++ +  ++  E   F D     +  R+ + S +          D
Sbjct: 13  VIEGLATGTPRR--VVNQSDAADRVAEL--FLDPGQRERIPRVYQKSRITTRRMAVDPLD 68

Query: 167 ETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTP 226
             +          R  +    E A  +        LA    R  +I +LV+        P
Sbjct: 69  AKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAP 128

Query: 227 SLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTW 286
            +   ++    L  +I+   +  MGC+A + A+  A + + A+P   ALVV  E+ S   
Sbjct: 129 GVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA 188

Query: 287 YGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKE 346
              ++++ ++ +  F  G AA+++ + ++ +     +        + +DN +   + L  
Sbjct: 189 VFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDN-TEDGIVLGV 247

Query: 347 DAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYK 406
           +  G           E+  +      + + P+V  +                        
Sbjct: 248 NHNG--------ITCELSENLPGYIFSGVAPVVTEMLWDNGL----------------QI 283

Query: 407 QAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAG 466
              +   I     K++++  ++L ++ EL   S   L RFGN  S S+ + L  +   A 
Sbjct: 284 SDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAE 343

Query: 467 VKRG-DRIWQTAFGSGVKCNSVVWKALR 493
             +        AFG GV    +++  +R
Sbjct: 344 SAKAISTGVAFAFGPGVTVEGMLFDIIR 371
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 149 Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 Back     information, alignment and structure
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Length = 221 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query508
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 100.0
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 100.0
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 100.0
d1hnja1174 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.98
d1mzja1181 Priming beta-ketosynthase from the r1128 polyketid 99.98
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.97
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.97
d1xpma1166 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 99.95
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.9
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.89
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 99.88
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.88
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 99.87
d1ee0a2160 Pyrone synthase (PyS, chalcone synthase 2) {Gerber 99.87
d1u0ua2156 Dihydropinosylvin synthase {Scots pine (Pinus sylv 99.87
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.87
d1j3na1249 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 99.07
d2gfva1250 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 98.96
d1ox0a1256 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 98.95
d1ulqa1273 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 98.88
d1m3ka1268 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 98.83
d1e5ma1250 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 98.82
d1xpma2221 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 98.81
d1wdkc1262 Fatty oxidation complex beta subunit (3-ketoacyl-C 98.69
d1tqya1216 Actinorhodin polyketide putative beta-ketoacyl syn 98.5
d2ix4a1270 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 98.47
d1afwa1269 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 98.43
d2vbaa1253 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 98.38
d1tqyb1208 Actinorhodin polyketide putative beta-ketoacyl syn 98.34
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 96.57
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 95.98
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 95.31
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 95.28
d1tqyb2194 Actinorhodin polyketide putative beta-ketoacyl syn 94.94
d1tqya2205 Actinorhodin polyketide putative beta-ketoacyl syn 92.75
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 91.58
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 89.49
d1ulqa2125 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 87.12
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 86.5
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 86.25
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 84.6
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 83.57
d1wdkc2128 Fatty oxidation complex beta subunit (3-ketoacyl-C 80.69
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.9e-53  Score=440.95  Aligned_cols=349  Identities=17%  Similarity=0.201  Sum_probs=266.9

Q ss_pred             ceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccC-----CCCCC----Cccc
Q 038123          115 WIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFC-----PGYRP----NLKD  185 (508)
Q Consensus       115 ~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~-----~~~~~----~~~~  185 (508)
                      ..+|.|+|+|+|+  ++|+|+|+.+.+..... +++..+.+.||++++||++||++.+....     .+..+    .+..
T Consensus        11 ~a~I~g~g~~~P~--~~v~n~e~~~~~~~~~~-~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~   87 (372)
T d1teda_          11 VAVIEGLATGTPR--RVVNQSDAADRVAELFL-DPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHL   87 (372)
T ss_dssp             EEEEEEEEEECCS--CEEEHHHHHHHHHTC-----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHH
T ss_pred             eEEEEEEEEeCCC--eEEcHHHHHHHHHhhcC-ChHHHHHHHHHHHccCCcccceeccccccchhhhhhcCCCHHHHHHH
Confidence            4789999999999  89999999998875322 33344566889999999999997543210     01112    2334


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHH
Q 038123          186 GREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDL  265 (508)
Q Consensus       186 ~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~l  265 (508)
                      +.+++.+|+++|++++|+++|++|+|||+||++|++++..|+++++|+++||+++++..++++++||+|++.||++|.++
T Consensus        88 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~  167 (372)
T d1teda_          88 FYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY  167 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHH
Confidence            56889999999999999999999999999999987788999999999999999988999999878999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccc--cceeeEEeeeeccCCcccccee
Q 038123          266 LNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSK--YEFKQLVRTHKGMDNRSFKCMH  343 (508)
Q Consensus       266 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~--~~L~~~~~t~~~sd~~~~~~~~  343 (508)
                      |++++.++||||++|.+|.++....+....++.++|||||+|+||++++.......  +.+.... ++...+.  .+.+.
T Consensus       168 l~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~  244 (372)
T d1teda_         168 VRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSF-SQLLDNT--EDGIV  244 (372)
T ss_dssp             HHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEE-EEECTTC--TTSEE
T ss_pred             HhcCCCccceeeeehhhcccccCCCcchhhhhhhhhcccceeEEeccCCcccccCCceeEEeccc-ccccCCC--ccccc
Confidence            99999999999999999876654445444446789999999999998775322111  1111111 1111111  11111


Q ss_pred             eccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHH
Q 038123          344 LKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLD  423 (508)
Q Consensus       344 ~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld  423 (508)
                      ...++ +...+..+++++....+.+                 ...+.++|+++++++      +|||+|++||+|+++++
T Consensus       245 ~~~~~-~~~~~~~~~~~~~~~~~~~-----------------~~~i~~~L~~~gl~~------~did~~i~Hq~~~~i~~  300 (372)
T d1teda_         245 LGVNH-NGITCELSENLPGYIFSGV-----------------APVVTEMLWDNGLQI------SDIDLWAIHPGGPKIIE  300 (372)
T ss_dssp             EEEET-TEEEEEECTTHHHHHHHHH-----------------HHHHHHHHHHTTCCG------GGCSCEEECCSCHHHHH
T ss_pred             cCCCC-CcceeechHHHHHHHHHHH-----------------HHHHHHHHHhcCCCH------HHhhhhhccCccHHHHH
Confidence            11111 1111112223322211111                 134568899999998      99999999999999999


Q ss_pred             HHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCC-CEEEEEeechHHhhhheeEEEec
Q 038123          424 EIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRG-DRIWQTAFGSGVKCNSVVWKALR  493 (508)
Q Consensus       424 ~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~G-d~vlliafGsG~~~~sav~r~~~  493 (508)
                      .+++.||++++++..|+.++.+||||+|+|+|+.|+.+.++|++++| |++++++||+|++|+++||++++
T Consensus       301 ~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~~  371 (372)
T d1teda_         301 QSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR  371 (372)
T ss_dssp             HHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECC
T ss_pred             HHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHHhheeec
Confidence            99999999999998888899999999999999999999999998776 89999999999999999999986
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure