Citrus Sinensis ID: 038127

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
Protein Sequence
MVSKRYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAALLLLVLLTFW
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEEEEEcccEEEEEEEEcccEEccccccccEEEEEEcccEEEEEEcccEEEEcccccccccccccccccccEEEEccccccccccccccccccEEccccccccccccEEEEEEEEccccccccccccccEEEcccccccccccEEEcccccccccccEEEEEEEEEEEEEEEEcccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEcccccEEEEEEEEEccccccccccEEEEEcccccccEEEEEEccccccccccccccEEEcccHHHHHHHHHccccccEEEEEEEEEcccccccccccccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHccHHHcccccccccEEEEEEEEEEccccEEEEEEEEcccccccccccccEEEEEEccccEEEEEcccccccccccHHcccccccccccccEEEEccccccccccccHcccccEEccccccHHHcEEEEEEEEEccccccccEcccccEEEEcccccccccccEEccccccccccccccEEEEEEEEEEEEcccccccccccEEEEEEEEccccccccccccccccccccccccccccHHHccccccccccccccccccccccEEEEEEEEEcccccEEEEEEEEEccccccccccEEEEEcccccccEEEEEEccccccccccccccEEEEccHHHHHHHHHccccccEEEEEEEEcccccEEEccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MVSKRYACLFVLTFVVALIFSHAvaydtldptgnitikwdvmswipDGYVALVTMTNFQMYRhimepgwtlgwtWAKKEVIWSMVGaqateqgdcskfkiniphscmknptvvdllpgvpynqqiancckggvvgswgqdpsaAVSSFqlsvgrsgssnktvrlpknftllgpgrgytcsqaknvlptafisadgRRRTQAMMTWNVTCTYSQilasknptccvsmssfynstitpcpscscgcqnknncvksdsdiRSVVGMMNTTTIVAPllhctqhmcpirvhwHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVvqhpnlnnvtevfsfnykplipydstndtgmfyGIKFFNDIllqsgpegnvqSELILQKDmntftykqgwafprkiyfngdecsmplpedypylpnsaHAKAIASSALAALLLLVLLTFW
Flexible Loop (DISEMBL)
MVSKRYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPSAAVSSFQLSvgrsgssnktvrlpKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAALLLLVLLTFW
Low Complexity Region (SEG)
MVSKRYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNsahakaiassalaallllvllTFW
Disordered region (IsUnstruct)
****RYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQ***********************RLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAALLLLVLLTFW
Disordered Region (DISOPRED)
****RYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNV*********GRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQ*************************APLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYP************SSALAALLLLVLLTFW
Disordered Region (DISEMBL)
MVSKRYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPSAAVSSF**********NKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAALLLLVLLTFW
Disordered Region (DISPRO)
MVSKRYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAALLLLVLLTFW
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVSKRYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAALLLLVLLTFW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	438	2.2.26 [Sep-21-2011]
Q9LFW3	431	COBRA-like protein 4 OS=A	yes	no	0.938	0.953	0.718	0.0
Q10JL1	468	COBRA-like protein 5 OS=O	yes	no	0.970	0.908	0.628	1e-176
A2XHZ9	468	COBRA-like protein 5 OS=O	N/A	no	0.970	0.908	0.628	1e-176
Q94KT8	456	Protein COBRA OS=Arabidop	no	no	0.949	0.912	0.652	1e-172
Q6Z4G7	451	COBRA-like protein 6 OS=O	no	no	0.942	0.915	0.640	1e-171
Q9SRT7	452	COBRA-like protein 1 OS=A	no	no	0.968	0.938	0.633	1e-170
Q8L8Q7	441	COBRA-like protein 2 OS=A	no	no	0.924	0.918	0.658	1e-167
Q6Z4G8	446	COBRA-like protein 1 OS=O	no	no	0.958	0.941	0.620	1e-166
Q60E70	457	COBRA-like protein 3 OS=O	no	no	0.892	0.855	0.673	1e-165
Q75IW1	458	COBRA-like protein 2 OS=O	no	no	0.958	0.917	0.617	1e-159

>sp|Q9LFW3|COBL4_ARATH COBRA-like protein 4 OS=Arabidopsis thaliana GN=COBL4 PE=2 SV=2

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/412 (71%), Positives = 344/412 (83%), Gaps = 1/412 (0%)

Query: 23  AVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIW 82
           A AYD LDP+GNITIKWD+MSW  DGYVA VTM NFQ+YRHI  PGWTLGWTWAKKEVIW
Sbjct: 18  ATAYDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPGWTLGWTWAKKEVIW 77

Query: 83  SMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPS 142
           SMVGAQ TEQGDCSKFK N+PH C K PTVVDLLPGVPYNQQ +NCCKGGV+G+WGQDPS
Sbjct: 78  SMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVIGAWGQDPS 137

Query: 143 AAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAM 202
           AAVS FQ+S G +G++NKTV+LPKNFTLLGPG GYTC  AK V  T F++ D RR+TQA+
Sbjct: 138 AAVSQFQVSAGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVFLTTDKRRKTQAL 197

Query: 203 MTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCVKSDSDIRSVVG 262
           MTWNVTCTYSQ LA K+P+CCVS SSFYN TITPCPSC+CGC+NK +CVK+DS I +  G
Sbjct: 198 MTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSCACGCENKKSCVKADSKILTKKG 257

Query: 263 MMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHP 322
           +        PLL CT HMCP+RVHWHVK NYK YWRVK++ITNFNY++N+T WTL +QHP
Sbjct: 258 LNTPKKDNTPLLQCTHHMCPVRVHWHVKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHP 317

Query: 323 NLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNTF 382
           NLNNVT+VFSF+YKP+ PY S NDTGMFYG KF+ND+L+++GP GNVQSE++LQKD  TF
Sbjct: 318 NLNNVTQVFSFDYKPVSPYGSINDTGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTF 377

Query: 383 TYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAALLLLVL 434
           T+KQGWAFPRK+YFNGDEC +P P+ YP+LPNSA     AS +L  LLLL +
Sbjct: 378 TFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSAQGN-FASFSLTILLLLFI 428

Arabidopsis thaliana (taxid: 3702)

>sp|Q10JL1|COBL5_ORYSJ COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1

 Score =  618 bits (1593), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 289/460 (62%), Positives = 350/460 (76%), Gaps = 35/460 (7%)

Query: 11  VLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWT 70
           +L  ++A+  S AVAYD LDP GNITIKWDV+SW PDGYVA+VTM+N+QMYR I+ PGWT
Sbjct: 8   LLALLLAVTCSVAVAYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQILAPGWT 67

Query: 71  LGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCK 130
           +GW+WAKKEVIWS+VGAQATEQGDCSKFK  IPHSC + P +VDLLPGVPYNQQIANCCK
Sbjct: 68  VGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQQIANCCK 127

Query: 131 GGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAF 190
            GVV ++GQDP+ +VS+FQ+SVG +G++NKTV+LP NFTL GPG GYTC  A  V  T +
Sbjct: 128 AGVVSAYGQDPAGSVSAFQVSVGLAGTTNKTVKLPTNFTLAGPGPGYTCGPATIVPSTVY 187

Query: 191 ISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNK--- 247
           ++ D RRRTQA+MTW VTCTYSQ LAS+ PTCCVS SSFYNSTI PC  C+CGC +    
Sbjct: 188 LTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACGCGHDGYR 247

Query: 248 -----------------------------NNCVKSDSDIRSVVGMMNTTTIVAPLLHCTQ 278
                                          C+  DS      G+       APLL CT 
Sbjct: 248 GNGGGGKNARAGDGRSRRNSGGGGGHSGGTECIMGDSKRALSAGVNTPRKDGAPLLQCTS 307

Query: 279 HMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPL 338
           HMCPIRVHWHVKLNYK YWR K++ITNFNY++NYT+WTLV QHPNLNNVTEVFSF YKPL
Sbjct: 308 HMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHPNLNNVTEVFSFQYKPL 367

Query: 339 IPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNG 398
           +PY + NDTGMFYG+KF+ND+L+++GP GNVQSE++++KD NTFT+ QGWAFPRKIYFNG
Sbjct: 368 LPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTFTFSQGWAFPRKIYFNG 427

Query: 399 DECSMPLPEDYPYLPNSA---HAKAIASSALAALLLLVLL 435
           DEC MP P+ YPYLPNSA     +++A++A A L++L+L+
Sbjct: 428 DECKMPPPDSYPYLPNSAPIGPPRSVAAAASAILVVLLLV 467

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2XHZ9|COBL5_ORYSI COBRA-like protein 5 OS=Oryza sativa subsp. indica GN=BC1 PE=2 SV=1

 Score =  618 bits (1593), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 289/460 (62%), Positives = 350/460 (76%), Gaps = 35/460 (7%)

Query: 11  VLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWT 70
           +L  ++A+  S AVAYD LDP GNITIKWDV+SW PDGYVA+VTM+N+QMYR I+ PGWT
Sbjct: 8   LLALLLAVTCSVAVAYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQILAPGWT 67

Query: 71  LGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCK 130
           +GW+WAKKEVIWS+VGAQATEQGDCSKFK  IPHSC + P +VDLLPGVPYNQQIANCCK
Sbjct: 68  VGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQQIANCCK 127

Query: 131 GGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAF 190
            GVV ++GQDP+ +VS+FQ+SVG +G++NKTV+LP NFTL GPG GYTC  A  V  T +
Sbjct: 128 AGVVSAYGQDPAGSVSAFQVSVGLAGTTNKTVKLPTNFTLAGPGPGYTCGPATIVPSTVY 187

Query: 191 ISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNK--- 247
           ++ D RRRTQA+MTW VTCTYSQ LAS+ PTCCVS SSFYNSTI PC  C+CGC +    
Sbjct: 188 LTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACGCGHDGYR 247

Query: 248 -----------------------------NNCVKSDSDIRSVVGMMNTTTIVAPLLHCTQ 278
                                          C+  DS      G+       APLL CT 
Sbjct: 248 GNGGGGKNARAGDGRSRRNSGGGGGHSGGTECIMGDSKRALSAGVNTPRKDGAPLLQCTS 307

Query: 279 HMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPL 338
           HMCPIRVHWHVKLNYK YWR K++ITNFNY++NYT+WTLV QHPNLNNVTEVFSF YKPL
Sbjct: 308 HMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHPNLNNVTEVFSFQYKPL 367

Query: 339 IPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNG 398
           +PY + NDTGMFYG+KF+ND+L+++GP GNVQSE++++KD NTFT+ QGWAFPRKIYFNG
Sbjct: 368 LPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTFTFSQGWAFPRKIYFNG 427

Query: 399 DECSMPLPEDYPYLPNSA---HAKAIASSALAALLLLVLL 435
           DEC MP P+ YPYLPNSA     +++A++A A L++L+L+
Sbjct: 428 DECKMPPPDSYPYLPNSAPIGPPRSVAAAASAILVVLLLV 467

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q94KT8|COBRA_ARATH Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 SV=1

 Score =  604 bits (1557), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 276/423 (65%), Positives = 336/423 (79%), Gaps = 7/423 (1%)

Query: 1   MVSK-RYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQ 59
           +VSK  +  L+++  + +  F+   AYD LDP GNIT+KWDVMSW PDGYVA+VTM NFQ
Sbjct: 11  IVSKLSFLALWIVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQ 70

Query: 60  MYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGV 119
            YRHI  PGWTLGW WAKKEVIWSMVGAQ TEQGDCSK+K NIPH C K+PTVVDLLPG 
Sbjct: 71  KYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGT 130

Query: 120 PYNQQIANCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTC 179
           PYNQQIANCCKGGV+ SW QDP+ A SSFQ+SVG +G++NKTVR+P+NFTL+GPG GYTC
Sbjct: 131 PYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTC 190

Query: 180 SQAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPS 239
             AK V PT F++ D RR TQAMMTWN+TCTYSQ LA + PTCCVS+SSFYN TI  CP+
Sbjct: 191 GPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPT 250

Query: 240 CSCGCQNKNN----CVKSDS-DIRSVVG-MMNTTTIVAPLLHCTQHMCPIRVHWHVKLNY 293
           C+CGCQN       C+  D+  + SVV       T++ PL+ CT+HMCPIRVHWHVK NY
Sbjct: 251 CACGCQNNRTESGACLDPDTPHLASVVSPPTKKGTVLPPLVQCTRHMCPIRVHWHVKQNY 310

Query: 294 KKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGI 353
           K+YWRVK++ITNFNY++NYT+W LV QHPNL+N+T++FSFNYK L PY   NDT M +G+
Sbjct: 311 KEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQIFSFNYKSLTPYAGLNDTAMLWGV 370

Query: 354 KFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLP 413
           KF+ND L ++GP GNVQSE++ +KD +TFT+++GWAFPR+IYFNGD C MP P+ YP+LP
Sbjct: 371 KFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEKGWAFPRRIYFNGDNCVMPPPDSYPFLP 430

Query: 414 NSA 416
           N  
Sbjct: 431 NGG 433

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6Z4G7|COBL6_ORYSJ COBRA-like protein 6 OS=Oryza sativa subsp. japonica GN=BC1L7 PE=3 SV=1

 Score =  602 bits (1551), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 276/431 (64%), Positives = 341/431 (79%), Gaps = 18/431 (4%)

Query: 23  AVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIW 82
           AVAYD LDP GNITIKWDVMSW PDGYVA+VT+ N+Q YR IM PGWT+GWTWA++EVIW
Sbjct: 19  AVAYDPLDPNGNITIKWDVMSWTPDGYVAMVTINNYQTYRQIMAPGWTVGWTWARQEVIW 78

Query: 83  SMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPS 142
           SMVGAQAT+QGDCS+FK N+PH C + P VVDLLPGVPYNQQIANCC+GGV+ ++GQ PS
Sbjct: 79  SMVGAQATDQGDCSRFKANLPHCCRRTPAVVDLLPGVPYNQQIANCCRGGVLPAYGQAPS 138

Query: 143 AAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAM 202
           AA ++FQ+SVG++G++N+TVRLP+NFTLLGPG GYTC +A+ V  T F++AD RR+TQA+
Sbjct: 139 AAAAAFQVSVGQAGTTNRTVRLPRNFTLLGPGPGYTCGRARVVPSTVFLTADRRRKTQAL 198

Query: 203 MTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCVKSDSDIR--SV 260
           MTWNVTCTYSQ LASK P+CCVS SSFYN TI PC  C+CGC     CV+S+ D +  +V
Sbjct: 199 MTWNVTCTYSQHLASKYPSCCVSFSSFYNDTIVPCAKCACGCDAHKPCVRSERDGKRLAV 258

Query: 261 VGMMNTTTIVA--------------PLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNF 306
            G  +     A              PLL CT HMCP+RVHWHVKLNY++YWR K++I NF
Sbjct: 259 TGKKHDANANAHGRGNGVAAAAMAAPLLQCTTHMCPVRVHWHVKLNYREYWRAKITIVNF 318

Query: 307 NYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPE 366
           NY++NYT WTLV QHPNL+N+TEVFSF+YKP++ Y S NDT MFYG+K+FND L+++GP 
Sbjct: 319 NYRMNYTGWTLVAQHPNLDNITEVFSFDYKPVVSYGSINDTAMFYGLKYFNDQLMEAGPH 378

Query: 367 GNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPN--SAHAKAIASS 424
           GNVQSE++++KD  TFT++QGWAFPRK+YFNGDEC MP P+ YPYLPN     A ++  S
Sbjct: 379 GNVQSEVLMRKDARTFTFRQGWAFPRKVYFNGDECQMPPPDSYPYLPNAAPPAAASLVGS 438

Query: 425 ALAALLLLVLL 435
           A+A   L+  L
Sbjct: 439 AVAMAALVFFL 449

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SRT7|COBL1_ARATH COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1

 Score =  598 bits (1542), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 276/436 (63%), Positives = 340/436 (77%), Gaps = 12/436 (2%)

Query: 12  LTFVVALIF-------SHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHI 64
             F +++IF       + + AYD LDP+GNIT+KWD+++W  DGYVA VT+ NFQ YRHI
Sbjct: 13  FKFGISIIFLVSFSGLTPSEAYDPLDPSGNITVKWDIITWTGDGYVATVTVYNFQQYRHI 72

Query: 65  MEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQ 124
             PGWTLGW+WAK+EVIW M G Q TEQGDCSKFK  IPH C K P+VVDLLPG PYNQQ
Sbjct: 73  QAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKGTIPHCCKKTPSVVDLLPGSPYNQQ 132

Query: 125 IANCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKN 184
           IANCC+GGV+ SW QDP+ AVS+FQL+VG++G++NKTVR+PKNFTL  PG GYTCS AK 
Sbjct: 133 IANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKNFTLKAPGPGYTCSPAKI 192

Query: 185 VLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGC 244
           V PT FI  D RR TQA+MTWNVTCTYSQ LA K PTCCVS+SSFYN TI  CP+CSCGC
Sbjct: 193 VKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCGC 252

Query: 245 QNKN---NCVKSDS-DIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVK 300
           +N +   NCV      I SV+        + PL+ CT+HMCP+R+HWHVK+NYK+YWRVK
Sbjct: 253 RNTSQPGNCVDPKGPRIASVIPNPGKNAYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRVK 312

Query: 301 MSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDIL 360
           ++ITNFNY +NY++W LVVQHPN +N+T+ FSFNYKPL PY S NDTG+ +GIKF+ND+L
Sbjct: 313 VTITNFNYNMNYSQWNLVVQHPNFDNLTQTFSFNYKPLTPYASINDTGILWGIKFYNDLL 372

Query: 361 LQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKA 420
           +Q+GP GNVQSEL+ QK+ + FT+++GWAFPR+IYFNGD C MP P+ YP+LPN+   K+
Sbjct: 373 MQAGPFGNVQSELLFQKEASAFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNTGSHKS 432

Query: 421 IAS-SALAALLLLVLL 435
           + S  A  ALLL+V L
Sbjct: 433 VGSLFAAMALLLIVFL 448

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L8Q7|COBL2_ARATH COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2

 Score =  588 bits (1515), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 272/413 (65%), Positives = 327/413 (79%), Gaps = 8/413 (1%)

Query: 25  AYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSM 84
           AYD LDP GNITIKWD+MSW  DGYVA+VT+ NFQ YRHI  PGW LGW+W KKEVIWSM
Sbjct: 28  AYDALDPYGNITIKWDIMSWTGDGYVAVVTIFNFQQYRHIEAPGWQLGWSWMKKEVIWSM 87

Query: 85  VGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPSAA 144
           VG QATEQGDCSKFK NIPH C K P +VDLLPG PYNQQI+NCC+GGV+ +W QDP+ A
Sbjct: 88  VGGQATEQGDCSKFKGNIPHCCKKTPAIVDLLPGTPYNQQISNCCRGGVISAWAQDPATA 147

Query: 145 VSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMT 204
           +SSFQ+SVG+SG++N TVR P+N TL  PG GYTC  AK V P+ FISAD RR+TQ+++T
Sbjct: 148 ISSFQISVGQSGTTNTTVRAPRNITLKAPGPGYTCGPAKLVKPSRFISADKRRKTQSLLT 207

Query: 205 WNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNN---CVKSDSDIRSVV 261
           WN+TCTYSQ LA K PTCCVS+S+FYN TI PCP+CSCGCQN +    CV  D  I SVV
Sbjct: 208 WNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTCSCGCQNSSQAGTCV--DPKIASVV 265

Query: 262 GMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQH 321
             +    +  PLL CTQHMCPIRVHWHVK +YK+YWRVK++ITNFNY +NY++W LVVQH
Sbjct: 266 PALGKNNL-EPLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQH 324

Query: 322 PNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMNT 381
           PN +N+T++FSFNYKPL PY + NDT M +GIKF+ND L Q+GP GNVQSEL+ QK+   
Sbjct: 325 PNFDNLTKLFSFNYKPLNPYLNINDTAMLWGIKFYNDFLSQAGPVGNVQSELLFQKNPLE 384

Query: 382 FTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAALLLLVL 434
           FT+++GWAFPR+IYFNGD C MP P+ YP+LPN+  +  IA+S    LL+  L
Sbjct: 385 FTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNA--SPNIATSPFVILLITFL 435

Arabidopsis thaliana (taxid: 3702)

>sp|Q6Z4G8|COBL1_ORYSJ COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1

 Score =  585 bits (1509), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 268/432 (62%), Positives = 339/432 (78%), Gaps = 12/432 (2%)

Query: 10  FVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGW 69
            ++ F  +LI S + AYD LDP GNITIKWDV+ W PDGYVA+V++ N+Q YRHI  PGW
Sbjct: 14  LLVAFFSSLIPS-SEAYDPLDPNGNITIKWDVLQWTPDGYVAVVSLYNYQQYRHIQSPGW 72

Query: 70  TLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCC 129
            LGW WAKKE+IW+M G QATEQGDCSKFK NIPH C K+P +VDLLPG PYN QIANCC
Sbjct: 73  KLGWVWAKKEIIWAMNGGQATEQGDCSKFKSNIPHCCKKDPEIVDLLPGTPYNMQIANCC 132

Query: 130 KGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTA 189
           KGGV+ SW QDP+ A++SFQ+SVG++G++NKTVR+P+NFTL  PG GYTC  AK V PT 
Sbjct: 133 KGGVLNSWAQDPANAIASFQVSVGQAGTTNKTVRVPRNFTLKSPGPGYTCGSAKVVRPTK 192

Query: 190 FISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKN- 248
           F S DGRR TQA MTWNVTCTYSQI+A ++PTCCVS+SSFYN TI  CP+CSCGCQN   
Sbjct: 193 FFSQDGRRTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSFYNDTIVNCPTCSCGCQNNKP 252

Query: 249 -NCVKSDSD-IRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNF 306
            +CV+ +S  + SVV   N  ++  PL+ CT HMCPIRVHWHVK+NYK+YWRVK+++TNF
Sbjct: 253 GSCVEGNSPYLASVVNTHNKDSLT-PLVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNF 311

Query: 307 NYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPE 366
           NY++NY++W LV QHP+ +N+T +FSFNYK L PY   NDT M +GIK++ND+L+ +GP+
Sbjct: 312 NYRMNYSQWNLVTQHPSFDNLTTIFSFNYKSLNPYGVINDTAMLWGIKYYNDLLMTAGPD 371

Query: 367 GNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSAL 426
           GNVQSEL+ +KD  +FT+++GWAFPR++YFNGD C MP P+ YP+LPN       AS+ +
Sbjct: 372 GNVQSELLFKKDPKSFTFEKGWAFPRRVYFNGDNCVMPPPDAYPWLPN-------ASTRV 424

Query: 427 AALLLLVLLTFW 438
            + +LL  +T W
Sbjct: 425 MSSILLPFITIW 436

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q60E70|COBL3_ORYSJ COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1

 Score =  582 bits (1499), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 268/398 (67%), Positives = 318/398 (79%), Gaps = 7/398 (1%)

Query: 25  AYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSM 84
           AYD LDP GNITIKWDVMSW PDGYVA+VTM N+Q +RHI  PGW LGWTWAKKEVIWSM
Sbjct: 36  AYDALDPNGNITIKWDVMSWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSM 95

Query: 85  VGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPSAA 144
           VGAQ TEQGDCSKFK   PH C K+PTVVDLLPG PYN QIANCCK GV+ ++ QDPS A
Sbjct: 96  VGAQTTEQGDCSKFKGGTPHCCKKDPTVVDLLPGTPYNMQIANCCKAGVINTFNQDPSNA 155

Query: 145 VSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMT 204
            SSFQ+SVG +G++NKTV+LPKNFTL  PG GYTC +A  V PT F + DGRR TQA+MT
Sbjct: 156 ASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTGDGRRATQALMT 215

Query: 205 WNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNK----NNCVKSDSD-IRS 259
           WNVTCTYSQ LA K P+CCVS+SSFYN TI  CP+CSCGCQN      +CV  +S  ++S
Sbjct: 216 WNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVNCPTCSCGCQNNGTSPGSCVNENSPYLQS 275

Query: 260 VVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVV 319
            +      T   PL+ CT HMCPIR+HWHVKLNYK+YWRVK++ITNFNY++NYT+W LV 
Sbjct: 276 AIDGPGKWT-GQPLVQCTSHMCPIRIHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVA 334

Query: 320 QHPNLNNVTEVFSFNYKPLIPYDST-NDTGMFYGIKFFNDILLQSGPEGNVQSELILQKD 378
           QHPN NN+T++FSFNYKPL PY S  NDT MF+G+KF+ND+L+Q+GP GN QSEL+L+KD
Sbjct: 335 QHPNFNNITQLFSFNYKPLTPYGSKINDTAMFWGVKFYNDLLMQAGPLGNAQSELLLRKD 394

Query: 379 MNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSA 416
              FT+ +GWAFP ++YFNGD C MP P+ YP+LPN++
Sbjct: 395 SKDFTFDKGWAFPHRVYFNGDNCVMPPPDAYPWLPNAS 432

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q75IW1|COBL2_ORYSJ COBRA-like protein 2 OS=Oryza sativa subsp. japonica GN=BC1L2 PE=2 SV=1

 Score =  562 bits (1448), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 261/423 (61%), Positives = 319/423 (75%), Gaps = 3/423 (0%)

Query: 18  LIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAK 77
           L+   A AYD LDP GNITIKWD+  W PDGYVA+VT+ NFQ YRHI  PGW+LGW WAK
Sbjct: 22  LMVPFAEAYDPLDPNGNITIKWDITQWTPDGYVAVVTIYNFQKYRHIQAPGWSLGWAWAK 81

Query: 78  KEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSW 137
           KE+IWSM G QATEQGDCS FK NIPH C ++P VVDL+PG PYN Q  NCCKGGV+ SW
Sbjct: 82  KEIIWSMAGGQATEQGDCSAFKANIPHCCKRDPRVVDLVPGAPYNMQFGNCCKGGVLTSW 141

Query: 138 GQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVL-PTAFISADGR 196
            QDP  AV+SFQ++VG SG+SNKTV+ PKNFTL  PG GY+C  A+ V  PT FIS DGR
Sbjct: 142 VQDPLNAVASFQITVGHSGTSNKTVKAPKNFTLKAPGPGYSCGLAQEVKPPTRFISLDGR 201

Query: 197 RRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNK--NNCVKSD 254
           R TQA +TWNVTCTYSQ +A + PTCCVS+SSFYN TI  CP C+CGCQNK   +CV+ +
Sbjct: 202 RTTQAHVTWNVTCTYSQFVAQRAPTCCVSLSSFYNETIVNCPKCACGCQNKKPGSCVEGN 261

Query: 255 SDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTE 314
           S   + V        + PL+ CT HMCPIRVHWHVKLNY+ YWRVK++ITN+NY++NY++
Sbjct: 262 SPYLASVVNGPGKGSLTPLVQCTPHMCPIRVHWHVKLNYRDYWRVKVTITNWNYRMNYSQ 321

Query: 315 WTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELI 374
           W LVVQHPN  NV+ VFSFNYK L PY   NDT M +G+K++ND+L+ +GP+GNVQSEL+
Sbjct: 322 WNLVVQHPNFENVSTVFSFNYKSLNPYGVINDTAMMWGVKYYNDLLMVAGPDGNVQSELL 381

Query: 375 LQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAALLLLVL 434
            +KD +TFT+ +GWAFPR+IYFNG+ C MP P+ YP+LP S+  +      L + L+   
Sbjct: 382 FRKDRSTFTFDKGWAFPRRIYFNGESCVMPSPDLYPWLPPSSTPRFRTVFLLMSFLVCGT 441

Query: 435 LTF 437
           L F
Sbjct: 442 LAF 444

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	438
224124106	439	predicted protein [Populus trichocarpa]	1.0	0.997	0.760	0.0
255547139	1048	hypothetical protein RCOM_1468720 [Ricin	0.906	0.378	0.751	0.0
359491365	437	PREDICTED: LOW QUALITY PROTEIN: COBRA-li	0.949	0.951	0.759	0.0
297734084	954	unnamed protein product [Vitis vinifera]	0.954	0.438	0.752	0.0
298204465	431	unnamed protein product [Vitis vinifera]	0.977	0.993	0.727	0.0
359488329	438	PREDICTED: COBRA-like protein 4-like, pa	0.958	0.958	0.736	0.0
225456557	462	PREDICTED: COBRA-like protein 4 [Vitis v	0.963	0.913	0.731	0.0
429326458	453	COBRA-like protein [Populus tomentosa]	0.965	0.933	0.723	0.0
118488472	453	unknown [Populus trichocarpa]	0.947	0.916	0.727	0.0
363807074	431	uncharacterized protein LOC100783410 pre	0.979	0.995	0.709	0.0

>gi|224124106|ref|XP_002330106.1| predicted protein [Populus trichocarpa] gi|222871240|gb|EEF08371.1| predicted protein [Populus trichocarpa]

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/439 (76%), Positives = 381/439 (86%), Gaps = 1/439 (0%)

Query: 1   MVSKRYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQM 60
           M   R++  F       L+FS A AYD LDPTGNIT+KWDV+SW PDGYVA+VTMTNFQM
Sbjct: 1   MDFDRFSSPFFSAVCFILVFSRAEAYDYLDPTGNITLKWDVISWTPDGYVAVVTMTNFQM 60

Query: 61  YRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVP 120
           YRHIM PGWT+GWTWAKKEVIWSMVGAQATEQGDCSKF++NIPH CMKNPTVVD+LPGVP
Sbjct: 61  YRHIMSPGWTVGWTWAKKEVIWSMVGAQATEQGDCSKFRMNIPHCCMKNPTVVDMLPGVP 120

Query: 121 YNQQIANCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCS 180
           YNQQIANCCKGGVV SWGQDPSAAVSSFQLSVGRSG++NKTVRLPKNFTLLGPG GY+CS
Sbjct: 121 YNQQIANCCKGGVVSSWGQDPSAAVSSFQLSVGRSGTTNKTVRLPKNFTLLGPGLGYSCS 180

Query: 181 QAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSC 240
           QAK V  T F+++DGRR+TQAMMTWNVTCTYSQ+LASKNPTCCVSMSSFYNSTITPC +C
Sbjct: 181 QAKIVPSTVFLTSDGRRKTQAMMTWNVTCTYSQMLASKNPTCCVSMSSFYNSTITPCRTC 240

Query: 241 SCGCQNKNNCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVK 300
           +CGCQN + CV SDS I+SVVG+   T    PL+ CT+H CPIRVHWHVKLNYK+YWRVK
Sbjct: 241 ACGCQNNSTCVPSDSMIQSVVGLNTPTKDNTPLVQCTKHNCPIRVHWHVKLNYKEYWRVK 300

Query: 301 MSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDIL 360
           +SITNFNY++NYT+WTLV QHPNLNN+T+VFSF YKPL+PY S ND+GMFYG+KFFNDIL
Sbjct: 301 ISITNFNYRLNYTQWTLVAQHPNLNNITQVFSFAYKPLLPYKSANDSGMFYGVKFFNDIL 360

Query: 361 LQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKA 420
           +++GP+GN+Q+ELILQKD NTFT  +GWAFPRK+YFNGDEC MPLP+DYPYLPNSA    
Sbjct: 361 MEAGPDGNIQTELILQKDKNTFTLNKGWAFPRKVYFNGDECMMPLPDDYPYLPNSAPKNV 420

Query: 421 IA-SSALAALLLLVLLTFW 438
           I  S  ++A  LL L+ FW
Sbjct: 421 IGLSFVISAFFLLELIAFW 439

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547139|ref|XP_002514627.1| hypothetical protein RCOM_1468720 [Ricinus communis] gi|223546231|gb|EEF47733.1| hypothetical protein RCOM_1468720 [Ricinus communis]

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/426 (75%), Positives = 376/426 (88%)

Query: 10   FVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGW 69
            F+ +F+  ++F HA A+D LDPTGNITIKWD++SW PDGYVA+VTMTNFQMYRHI  PGW
Sbjct: 618  FIYSFIFVMLFFHAGAFDPLDPTGNITIKWDLLSWTPDGYVAVVTMTNFQMYRHITSPGW 677

Query: 70   TLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCC 129
            T+GWTWAKKEVIWSMVGAQAT+QGDCS+F+INIPH C +NPTVVDLLPGVPYNQQIANCC
Sbjct: 678  TIGWTWAKKEVIWSMVGAQATDQGDCSRFRINIPHCCKRNPTVVDLLPGVPYNQQIANCC 737

Query: 130  KGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTA 189
            K GV+ S GQDPS +VS+FQLSVG SG++NKTVRLPKNFTLLG  RGYTCSQA  V P+ 
Sbjct: 738  KAGVLSSLGQDPSTSVSAFQLSVGLSGTTNKTVRLPKNFTLLGQARGYTCSQATIVNPSV 797

Query: 190  FISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNN 249
            F+S+DGRR+T AMMTWNVTCTYSQ+LAS +PTCCVSMSSFYNSTI  CP+CSCGCQNKNN
Sbjct: 798  FLSSDGRRKTHAMMTWNVTCTYSQMLASPDPTCCVSMSSFYNSTIVSCPACSCGCQNKNN 857

Query: 250  CVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQ 309
            CV+S+S+I S+ G+   TT    LL CTQHMCP+RVHWHVKLNYK YWRVK++ITNFNY 
Sbjct: 858  CVESNSNILSIAGVNTPTTDNTLLLLCTQHMCPVRVHWHVKLNYKDYWRVKIAITNFNYG 917

Query: 310  VNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNV 369
            VNYT+WTLVVQHPNLNNVT+VFSF+Y P++PY STND+GMFYGIKF+ND+L+++GP+GNV
Sbjct: 918  VNYTQWTLVVQHPNLNNVTQVFSFDYTPVLPYPSTNDSGMFYGIKFYNDVLMEAGPDGNV 977

Query: 370  QSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAAL 429
            QSELIL+KDMNTFT+ QGWAFPRK+YFNGDEC MP P++YPYLPNSA A  +A S+L   
Sbjct: 978  QSELILKKDMNTFTFHQGWAFPRKVYFNGDECVMPPPDEYPYLPNSAPANWLALSSLMPA 1037

Query: 430  LLLVLL 435
            +LLV++
Sbjct: 1038 ILLVVI 1043

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491365|ref|XP_002265282.2| PREDICTED: LOW QUALITY PROTEIN: COBRA-like protein 4-like [Vitis vinifera]

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/416 (75%), Positives = 359/416 (86%)

Query: 9   LFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPG 68
           +F    V+  +FS+ +AYD LDP GNITIKWDVMSW  DGYVA+VTM+NFQMYRHIM PG
Sbjct: 8   VFXTYIVILPLFSYMMAYDPLDPNGNITIKWDVMSWTSDGYVAVVTMSNFQMYRHIMSPG 67

Query: 69  WTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANC 128
           WTLGW WAKKEVIWSMVGAQATEQGDCSKFK NIPH C +NPTV+DLLPGVPYNQQIANC
Sbjct: 68  WTLGWIWAKKEVIWSMVGAQATEQGDCSKFKGNIPHCCKRNPTVIDLLPGVPYNQQIANC 127

Query: 129 CKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPT 188
           CKGGVV SWGQD SAAVSSFQLSVG SG+SNKTVRLPKNFTLLGPG GYTC QAK V  +
Sbjct: 128 CKGGVVASWGQDSSAAVSSFQLSVGLSGTSNKTVRLPKNFTLLGPGPGYTCGQAKTVPSS 187

Query: 189 AFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKN 248
            F+S+DGRR+TQA+MTWNVTCTYSQ++ SK P+CCVS SSFYNSTITPC SC+CGCQNKN
Sbjct: 188 IFLSSDGRRKTQALMTWNVTCTYSQMVVSKYPSCCVSFSSFYNSTITPCTSCACGCQNKN 247

Query: 249 NCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNY 308
           NC+ SD+ I SVVG+   T    PLL CTQH CP+RVHWHVK+NYK+YWRVK++ITNFNY
Sbjct: 248 NCIMSDTKIESVVGLHTPTKDNMPLLQCTQHNCPVRVHWHVKVNYKEYWRVKITITNFNY 307

Query: 309 QVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGN 368
           ++NYT+WTLV QHPNLNN+T+VFSF YKPLIPY S ND+GMFYGIKF+ND+L++ GP+GN
Sbjct: 308 RMNYTQWTLVAQHPNLNNITQVFSFAYKPLIPYTSINDSGMFYGIKFYNDVLMEDGPDGN 367

Query: 369 VQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASS 424
           VQSE+ILQKD NTFT K+GWAFP++IYFNGDEC MPLP+ YP L  SA A  IA S
Sbjct: 368 VQSEMILQKDKNTFTLKEGWAFPQRIYFNGDECMMPLPDSYPLLAGSAPANQIALS 423

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734084|emb|CBI15331.3| unnamed protein product [Vitis vinifera]

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/424 (75%), Positives = 360/424 (84%)

Query: 1   MVSKRYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQM 60
           M   R A   V     +++ S AVAYD LDP GNITIKWDVMSW  DGYVA+VTM+NFQM
Sbjct: 22  MEFNRVAYSIVSAVFFSMVLSPAVAYDPLDPNGNITIKWDVMSWTSDGYVAVVTMSNFQM 81

Query: 61  YRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVP 120
           YRHIM PGWTLGW WAKKEVIWSMVGAQATEQGDCSKFK NIPH C +NPTV+DLLPGVP
Sbjct: 82  YRHIMSPGWTLGWIWAKKEVIWSMVGAQATEQGDCSKFKGNIPHCCKRNPTVIDLLPGVP 141

Query: 121 YNQQIANCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCS 180
           YNQQIANCCKGGVV SWGQD SAAVSSFQLSVG SG+SNKTVRLPKNFTLLGPG GYTC 
Sbjct: 142 YNQQIANCCKGGVVASWGQDSSAAVSSFQLSVGLSGTSNKTVRLPKNFTLLGPGPGYTCG 201

Query: 181 QAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSC 240
           QAK V  + F+S+DGRR+TQA+MTWNVTCTYSQ++ SK P+CCVS SSFYNSTITPC SC
Sbjct: 202 QAKTVPSSIFLSSDGRRKTQALMTWNVTCTYSQMVVSKYPSCCVSFSSFYNSTITPCTSC 261

Query: 241 SCGCQNKNNCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVK 300
           +CGCQNKNNC+ SD+ I SVVG+   T    PLL CTQH CP+RVHWHVK+NYK+YWRVK
Sbjct: 262 ACGCQNKNNCIMSDTKIESVVGLHTPTKDNMPLLQCTQHNCPVRVHWHVKVNYKEYWRVK 321

Query: 301 MSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDIL 360
           ++ITNFNY++NYT+WTLV QHPNLNN+T+VFSF YKPLIPY S ND+GMFYGIKF+ND+L
Sbjct: 322 ITITNFNYRMNYTQWTLVAQHPNLNNITQVFSFAYKPLIPYTSINDSGMFYGIKFYNDVL 381

Query: 361 LQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKA 420
           ++ GP+GNVQSE+ILQKD NTFT K+GWAFP++IYFNGDEC MPLP+ YP L  SA A  
Sbjct: 382 MEDGPDGNVQSEMILQKDKNTFTLKEGWAFPQRIYFNGDECMMPLPDSYPLLAGSAPANQ 441

Query: 421 IASS 424
           IA S
Sbjct: 442 IALS 445

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298204465|emb|CBI16945.3| unnamed protein product [Vitis vinifera]

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/430 (72%), Positives = 368/430 (85%), Gaps = 2/430 (0%)

Query: 10  FVLT-FVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPG 68
           FV++ F   ++FS+  AYD LDP GNITIKWD+MSW PDGYVA+VTM NFQMYRHI+ PG
Sbjct: 3   FVISAFFFLMMFSYTAAYDPLDPNGNITIKWDIMSWTPDGYVAVVTMHNFQMYRHIISPG 62

Query: 69  WTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANC 128
           WTLGWTWAKKEVIWSMVGAQ TEQGDCSKFK NIPH C K PTVVDLLPGVPYNQQ +NC
Sbjct: 63  WTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNC 122

Query: 129 CKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPT 188
           CKGGVV SWGQDP+A+VS+FQ+SVG +G+SNKTV+LPKNFTLLGPG GYTC  AK V PT
Sbjct: 123 CKGGVVSSWGQDPAASVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGIAKIVPPT 182

Query: 189 AFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKN 248
            F++ D RR+TQA+MTWNVTCTYSQ+ A KNP+CCVS SSFYN TITPCPSC+CGCQNKN
Sbjct: 183 NFLTPDRRRKTQALMTWNVTCTYSQLRARKNPSCCVSFSSFYNETITPCPSCACGCQNKN 242

Query: 249 NCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNY 308
           NCV+SDS + S+VG+        PLL CT HMCP+RVHWH+K+NYK YWRVK+SITNFNY
Sbjct: 243 NCVQSDSKLLSMVGINTPRKDNVPLLQCTHHMCPVRVHWHLKINYKDYWRVKVSITNFNY 302

Query: 309 QVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGN 368
           ++NYT WTLVVQHPNLNNVT+VFSF+YKPL+PY+S NDTGMFYG+KF+ND L+++GP GN
Sbjct: 303 RLNYTLWTLVVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDQLMEAGPFGN 362

Query: 369 VQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAA 428
           VQSE++ QKD N+FT+KQGWAFPRK+YFNGDEC +PLPE YP+LPNSAH   +A S   +
Sbjct: 363 VQSEVLFQKD-NSFTFKQGWAFPRKVYFNGDECMLPLPETYPFLPNSAHQNLLAFSTFIS 421

Query: 429 LLLLVLLTFW 438
            ++ +L+T W
Sbjct: 422 SVIFLLVTVW 431

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488329|ref|XP_002277911.2| PREDICTED: COBRA-like protein 4-like, partial [Vitis vinifera]

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/421 (73%), Positives = 362/421 (85%), Gaps = 1/421 (0%)

Query: 18  LIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAK 77
           L+  +A AYD LDP GNITIKWD+MSW PDGYVA+VTM NFQMYRHI+ PGWTLGWTWAK
Sbjct: 19  LLIVYAAAYDPLDPNGNITIKWDIMSWTPDGYVAVVTMHNFQMYRHIISPGWTLGWTWAK 78

Query: 78  KEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSW 137
           KEVIWSMVGAQ TEQGDCSKFK NIPH C K PTVVDLLPGVPYNQQ +NCCKGGVV SW
Sbjct: 79  KEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVSSW 138

Query: 138 GQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRR 197
           GQDP+A+VS+FQ+SVG +G+SNKTV+LPKNFTLLGPG GYTC  AK V PT F++ D RR
Sbjct: 139 GQDPAASVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGIAKIVPPTNFLTPDRRR 198

Query: 198 RTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCVKSDSDI 257
           +TQA+MTWNVTCTYSQ+ A KNP+CCVS SSFYN TITPCPSC+CGCQNKNNCV+SDS +
Sbjct: 199 KTQALMTWNVTCTYSQLRARKNPSCCVSFSSFYNETITPCPSCACGCQNKNNCVQSDSKL 258

Query: 258 RSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTL 317
            S+VG+        PLL CT HMCP+RVHWH+K+NYK YWRVK+SITNFNY++NYT WTL
Sbjct: 259 LSMVGINTPRKDNVPLLQCTHHMCPVRVHWHLKINYKDYWRVKVSITNFNYRLNYTLWTL 318

Query: 318 VVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQK 377
           VVQHPNLNNVT+VFSF+YKPL+PY+S NDTGMFYG+KF+ND L+++GP GNVQSE++ QK
Sbjct: 319 VVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDQLMEAGPFGNVQSEVLFQK 378

Query: 378 DMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAALLLLVLLTF 437
           D N+FT+KQGWAFPRK+YFNGDEC +PLPE YP+LPNSAH   +A S   + ++ +L+T 
Sbjct: 379 D-NSFTFKQGWAFPRKVYFNGDECMLPLPETYPFLPNSAHQNLLAFSTFISSVIFLLVTV 437

Query: 438 W 438
           W
Sbjct: 438 W 438

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456557|ref|XP_002264378.1| PREDICTED: COBRA-like protein 4 [Vitis vinifera]

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/425 (73%), Positives = 363/425 (85%), Gaps = 3/425 (0%)

Query: 15  VVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWT 74
           +  ++ SHA+AYD LDPTGNITIKWDV+SW PDGYVALVTM NFQMYRHIM PGWTL W+
Sbjct: 40  IFFMMVSHAIAYDPLDPTGNITIKWDVVSWTPDGYVALVTMNNFQMYRHIMTPGWTLSWS 99

Query: 75  WAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVV 134
           WAKKEVIWSMVGAQ TEQGDCSKFK NIPH C K PTVVDLLPGVPYNQQIANCCK GVV
Sbjct: 100 WAKKEVIWSMVGAQTTEQGDCSKFKANIPHCCEKTPTVVDLLPGVPYNQQIANCCKAGVV 159

Query: 135 GSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISAD 194
            +WGQDP+ +VSSFQ+SVG++G+SNKTV+LPKNFTLLGPG GYTC  AK V  T +++ D
Sbjct: 160 AAWGQDPAGSVSSFQVSVGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTIYLTPD 219

Query: 195 GRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCVKSD 254
            RR+TQAMMTWNVTCTYSQ LASKNPTCCVS SSFYN T+TPCPSC+CGC+NKN C+ SD
Sbjct: 220 HRRKTQAMMTWNVTCTYSQFLASKNPTCCVSFSSFYNDTMTPCPSCACGCRNKNMCISSD 279

Query: 255 SDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTE 314
           S  + +  + N      PLL CT HMCPIRVHWHVKLNYK YWRVK++ITNFNY++NYT+
Sbjct: 280 S--KKLKALHNPKRSNTPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRMNYTQ 337

Query: 315 WTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELI 374
           WTLV QHPNLNNVT+VFSF+YKPL+PY+S NDTGMFYG+KF+ND+L+++G  GNVQSE++
Sbjct: 338 WTLVAQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLVEAGQHGNVQSEVL 397

Query: 375 LQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAA-LLLLV 433
           LQK+ +TFT+KQGWAFPRK+YFNGDEC +P P+ YP+LPNSAHA   A   +AA LLL++
Sbjct: 398 LQKNKDTFTFKQGWAFPRKVYFNGDECKLPPPDTYPFLPNSAHANPFAFWTMAAPLLLMI 457

Query: 434 LLTFW 438
           L T W
Sbjct: 458 LYTIW 462

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|429326458|gb|AFZ78569.1| COBRA-like protein [Populus tomentosa]

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/426 (72%), Positives = 362/426 (84%), Gaps = 3/426 (0%)

Query: 14  FVVALIF---SHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWT 70
           F++AL+F   S A AYD LDP GNITIKWDVMSW PDGYVA VTM+NFQMYRHI+ PGWT
Sbjct: 26  FLIALVFVMVSRAAAYDPLDPNGNITIKWDVMSWTPDGYVATVTMSNFQMYRHIISPGWT 85

Query: 71  LGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCK 130
           L W+WAKKEV+WSMVGAQ TEQGDCSKFK NIPH C K PTVVDLLPGVPYNQQ +NCCK
Sbjct: 86  LSWSWAKKEVLWSMVGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNCCK 145

Query: 131 GGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAF 190
           GGV+ +WGQDP+A+VS+FQ+SVG +G+SNKTV+LPKNFTLLGPG GYTC  AK V  T F
Sbjct: 146 GGVMAAWGQDPTASVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVF 205

Query: 191 ISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNC 250
           ++ D RR+TQA+MTWNVTCTYSQ LASKNPTCCVS SSFYN TITPCP+C+CGCQNKN+C
Sbjct: 206 LTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSFSSFYNETITPCPTCACGCQNKNSC 265

Query: 251 VKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQV 310
           VKS+S      G+        PLL CT HMCPIRVHWHVK+NY+ YWR K+++TNFNY++
Sbjct: 266 VKSNSKESHKKGINTPKKDNTPLLQCTHHMCPIRVHWHVKVNYRDYWRAKVAVTNFNYRM 325

Query: 311 NYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQ 370
           NYTEWTLVVQHPNLNNVT VFSF+YKPL+PY+S NDTGMFYG+KF+ND+L+++GP GNVQ
Sbjct: 326 NYTEWTLVVQHPNLNNVTRVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQ 385

Query: 371 SELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAALL 430
           SE++LQKD NTF+ KQGWAFPRK+YFNGDEC +P P+ YPYLPNSA+A   +  ++AA L
Sbjct: 386 SEVLLQKDKNTFSLKQGWAFPRKVYFNGDECRLPPPDTYPYLPNSAYANPTSILSMAASL 445

Query: 431 LLVLLT 436
           L +LL+
Sbjct: 446 LFILLS 451

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488472|gb|ABK96050.1| unknown [Populus trichocarpa]

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/418 (72%), Positives = 357/418 (85%), Gaps = 3/418 (0%)

Query: 14  FVVALIF---SHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWT 70
           F++AL+F    HA AYD LDP GNITIKWDVMSW PDGYVA VTM+NFQMYRHI+ PGWT
Sbjct: 26  FLIALVFMIVPHAAAYDPLDPNGNITIKWDVMSWTPDGYVATVTMSNFQMYRHIISPGWT 85

Query: 71  LGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCK 130
           L W+WAKKEV+WSMVGAQ TEQGDCSKFK NIPH C K PTVVDLLPGVPYNQQ +NCCK
Sbjct: 86  LSWSWAKKEVLWSMVGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNCCK 145

Query: 131 GGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAF 190
           GGV+ +WGQDP+A+VS+FQ+SVG +G+SNKTV+LPKNFTLLGPG GYTC  AK V  T F
Sbjct: 146 GGVMAAWGQDPTASVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVF 205

Query: 191 ISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNC 250
           ++ D RR+TQA+MTWNVTCTYSQ LASKNPTCCVS SSFYN TITPCP+C+CGCQNKN+C
Sbjct: 206 LTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSFSSFYNETITPCPTCACGCQNKNSC 265

Query: 251 VKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQV 310
           VKS+S      G+        PLL CT HMCPIRVHWHVK+NY+ YWR K+++TNFNY++
Sbjct: 266 VKSNSKESHKKGINTPKKDNTPLLQCTHHMCPIRVHWHVKVNYRDYWRAKVAVTNFNYRM 325

Query: 311 NYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQ 370
           NYTEWTLVVQHPNLNNVT+VFSF+YKPL+PY+S NDTGMFYG+KF+ND+L+++GP GNVQ
Sbjct: 326 NYTEWTLVVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQ 385

Query: 371 SELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAA 428
           SE++LQKD NTF+ KQGWAFPRK+YFNGDEC +P P+ YPYLPNSA+A   +  ++AA
Sbjct: 386 SEVLLQKDKNTFSLKQGWAFPRKVYFNGDECMLPPPDTYPYLPNSAYANPTSILSMAA 443

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807074|ref|NP_001242075.1| uncharacterized protein LOC100783410 precursor [Glycine max] gi|255635770|gb|ACU18234.1| unknown [Glycine max]

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/430 (70%), Positives = 363/430 (84%), Gaps = 1/430 (0%)

Query: 9   LFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPG 68
           L +    V ++FS+A AYD LDP GNITIKWDV+SW PDGYVA+VTM+NFQM+RHIM PG
Sbjct: 3   LVISAVCVIVLFSYAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMFRHIMNPG 62

Query: 69  WTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANC 128
           WTLGWTWAKKEVIWSMVGAQ TEQGDCSKFK N+PH C K PTVVDLLPGVPYNQQ +NC
Sbjct: 63  WTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNC 122

Query: 129 CKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPT 188
           CKGGVV +WGQDPS+AVSSFQ+S+G +G+SNKTV+LPKNFTLLGPG GYTC  AK V  T
Sbjct: 123 CKGGVVAAWGQDPSSAVSSFQVSIGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPST 182

Query: 189 AFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKN 248
            F++ D RR+TQA+MTWNVTCTYSQ LA KNP CCVS+SSFYN TITPCP+C+CGCQNK 
Sbjct: 183 VFLTPDKRRKTQALMTWNVTCTYSQFLARKNPGCCVSLSSFYNETITPCPTCACGCQNKR 242

Query: 249 NCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNY 308
           NCVKS+S   ++VG+  +     PLL CT HMCPIRVHWHVKLNYK YWRVK+++TNFNY
Sbjct: 243 NCVKSNSKRINMVGIHTSKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKVAVTNFNY 302

Query: 309 QVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGN 368
           ++NY+ WTL VQHPNLNNVT+VFSF+YKPL+PY+S NDTGMFYG+K+FND+L+++GP GN
Sbjct: 303 RMNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGN 362

Query: 369 VQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPNSAHAKAIASSALAA 428
           VQSE++LQK+ +TFT+KQGWAFPRK+YFNG+EC +P P+ YP LPNSA    +   A   
Sbjct: 363 VQSEILLQKNQDTFTFKQGWAFPRKVYFNGEECMLPPPDSYPILPNSAPVNLLNFPAF-V 421

Query: 429 LLLLVLLTFW 438
           L +LV++T W
Sbjct: 422 LTMLVMITVW 431

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	438
TAIR|locus:2143151	431	IRX6 "IRREGULAR XYLEM 6" [Arab	0.926	0.941	0.716	3.2e-175
TAIR|locus:2173532	456	COB "AT5G60920" [Arabidopsis t	0.945	0.907	0.655	3.4e-164
TAIR|locus:2076507	452	COBL1 "COBRA-like protein 1 pr	0.890	0.862	0.670	4.1e-159
TAIR|locus:2086601	441	COBL2 "AT3G29810" [Arabidopsis	0.917	0.911	0.656	1.1e-158
TAIR|locus:2024377	454	COBL6 "AT1G09790" [Arabidopsis	0.904	0.872	0.522	4.6e-121
TAIR|locus:2173547	204	COBL5 "COBRA-like protein 5 pr	0.445	0.955	0.536	4.8e-55
TAIR|locus:2130100	661	COBL7 "AT4G16120" [Arabidopsis	0.484	0.320	0.303	2.5e-29
TAIR|locus:2155889	663	SHV2 "SHAVEN 2" [Arabidopsis t	0.477	0.315	0.282	7.4e-28
TAIR|locus:2093673	653	COBL8 "COBRA-like protein 8 pr	0.474	0.318	0.282	1.7e-26
TAIR|locus:2085785	672	COBL10 "COBRA-like protein 10	0.504	0.328	0.275	4.9e-23

TAIR|locus:2143151 IRX6 "IRREGULAR XYLEM 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1702 (604.2 bits), Expect = 3.2e-175, P = 3.2e-175
 Identities = 291/406 (71%), Positives = 338/406 (83%)

Query:     9 LFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPG 68
             LF   F   +I   A AYD LDP+GNITIKWD+MSW  DGYVA VTM NFQ+YRHI  PG
Sbjct:     4 LFSFCFFFFMIIFTATAYDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPG 63

Query:    69 WTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANC 128
             WTLGWTWAKKEVIWSMVGAQ TEQGDCSKFK N+PH C K PTVVDLLPGVPYNQQ +NC
Sbjct:    64 WTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNC 123

Query:   129 CKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPT 188
             CKGGV+G+WGQDPSAAVS FQ+S G +G++NKTV+LPKNFTLLGPG GYTC  AK V  T
Sbjct:   124 CKGGVIGAWGQDPSAAVSQFQVSAGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPST 183

Query:   189 AFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKN 248
              F++ D RR+TQA+MTWNVTCTYSQ LA K+P+CCVS SSFYN TITPCPSC+CGC+NK 
Sbjct:   184 VFLTTDKRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSCACGCENKK 243

Query:   249 NCVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNY 308
             +CVK+DS I +  G+        PLL CT HMCP+RVHWHVK NYK YWRVK++ITNFNY
Sbjct:   244 SCVKADSKILTKKGLNTPKKDNTPLLQCTHHMCPVRVHWHVKTNYKDYWRVKIAITNFNY 303

Query:   309 QVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGN 368
             ++N+T WTL +QHPNLNNVT+VFSF+YKP+ PY S NDTGMFYG KF+ND+L+++GP GN
Sbjct:   304 RMNHTLWTLAIQHPNLNNVTQVFSFDYKPVSPYGSINDTGMFYGTKFYNDLLMEAGPSGN 363

Query:   369 VQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPN 414
             VQSE++LQKD  TFT+KQGWAFPRK+YFNGDEC +P P+ YP+LPN
Sbjct:   364 VQSEVLLQKDQKTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPN 409

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2173532 COB "AT5G60920" [Arabidopsis thaliana (taxid:3702)]

 Score = 1598 (567.6 bits), Expect = 3.4e-164, P = 3.4e-164
 Identities = 276/421 (65%), Positives = 336/421 (79%)

Query:     1 MVSK-RYACLFVLTFVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQ 59
             +VSK  +  L+++  + +  F+   AYD LDP GNIT+KWDVMSW PDGYVA+VTM NFQ
Sbjct:    11 IVSKLSFLALWIVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQ 70

Query:    60 MYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGV 119
              YRHI  PGWTLGW WAKKEVIWSMVGAQ TEQGDCSK+K NIPH C K+PTVVDLLPG 
Sbjct:    71 KYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGT 130

Query:   120 PYNQQIANCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTC 179
             PYNQQIANCCKGGV+ SW QDP+ A SSFQ+SVG +G++NKTVR+P+NFTL+GPG GYTC
Sbjct:   131 PYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTC 190

Query:   180 SQAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPS 239
               AK V PT F++ D RR TQAMMTWN+TCTYSQ LA + PTCCVS+SSFYN TI  CP+
Sbjct:   191 GPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPT 250

Query:   240 CSCGCQNKNN----CVKSDSD-IRSVVGMMNTT-TIVAPLLHCTQHMCPIRVHWHVKLNY 293
             C+CGCQN       C+  D+  + SVV       T++ PL+ CT+HMCPIRVHWHVK NY
Sbjct:   251 CACGCQNNRTESGACLDPDTPHLASVVSPPTKKGTVLPPLVQCTRHMCPIRVHWHVKQNY 310

Query:   294 KKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGI 353
             K+YWRVK++ITNFNY++NYT+W LV QHPNL+N+T++FSFNYK L PY   NDT M +G+
Sbjct:   311 KEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQIFSFNYKSLTPYAGLNDTAMLWGV 370

Query:   354 KFFNDILLQSGPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLP 413
             KF+ND L ++GP GNVQSE++ +KD +TFT+++GWAFPR+IYFNGD C MP P+ YP+LP
Sbjct:   371 KFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEKGWAFPRRIYFNGDNCVMPPPDSYPFLP 430

Query:   414 N 414
             N
Sbjct:   431 N 431

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009825 "multidimensional cell growth" evidence=RCA;IMP

GO:0009897 "external side of plasma membrane" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0010215 "cellulose microfibril organization" evidence=IMP

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=RCA;IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0009930 "longitudinal side of cell surface" evidence=IDA

TAIR|locus:2076507 COBL1 "COBRA-like protein 1 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 1550 (550.7 bits), Expect = 4.1e-159, P = 4.1e-159
 Identities = 264/394 (67%), Positives = 319/394 (80%)

Query:    25 AYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSM 84
             AYD LDP+GNIT+KWD+++W  DGYVA VT+ NFQ YRHI  PGWTLGW+WAK+EVIW M
Sbjct:    33 AYDPLDPSGNITVKWDIITWTGDGYVATVTVYNFQQYRHIQAPGWTLGWSWAKREVIWGM 92

Query:    85 VGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPSAA 144
              G Q TEQGDCSKFK  IPH C K P+VVDLLPG PYNQQIANCC+GGV+ SW QDP+ A
Sbjct:    93 NGGQTTEQGDCSKFKGTIPHCCKKTPSVVDLLPGSPYNQQIANCCRGGVLNSWAQDPATA 152

Query:   145 VSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMT 204
             VS+FQL+VG++G++NKTVR+PKNFTL  PG GYTCS AK V PT FI  D RR TQA+MT
Sbjct:   153 VSAFQLTVGQAGTTNKTVRVPKNFTLKAPGPGYTCSPAKIVKPTRFIGTDKRRVTQALMT 212

Query:   205 WNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKN---NCVKSDSD-IRSV 260
             WNVTCTYSQ LA K PTCCVS+SSFYN TI  CP+CSCGC+N +   NCV      I SV
Sbjct:   213 WNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCGCRNTSQPGNCVDPKGPRIASV 272

Query:   261 VGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQ 320
             +        + PL+ CT+HMCP+R+HWHVK+NYK+YWRVK++ITNFNY +NY++W LVVQ
Sbjct:   273 IPNPGKNAYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQ 332

Query:   321 HPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSGPEGNVQSELILQKDMN 380
             HPN +N+T+ FSFNYKPL PY S NDTG+ +GIKF+ND+L+Q+GP GNVQSEL+ QK+ +
Sbjct:   333 HPNFDNLTQTFSFNYKPLTPYASINDTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEAS 392

Query:   381 TFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPN 414
              FT+++GWAFPR+IYFNGD C MP P+ YP+LPN
Sbjct:   393 AFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPN 426

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0016570 "histone modification" evidence=RCA

GO:0048449 "floral organ formation" evidence=RCA

TAIR|locus:2086601 COBL2 "AT3G29810" [Arabidopsis thaliana (taxid:3702)]

 Score = 1546 (549.3 bits), Expect = 1.1e-158, P = 1.1e-158
 Identities = 270/411 (65%), Positives = 325/411 (79%)

Query:    10 FVLTFV---VALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIME 66
             F+L F+    +  F+   AYD LDP GNITIKWD+MSW  DGYVA+VT+ NFQ YRHI  
Sbjct:    10 FLLLFLCSWTSFTFTTTEAYDALDPYGNITIKWDIMSWTGDGYVAVVTIFNFQQYRHIEA 69

Query:    67 PGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIA 126
             PGW LGW+W KKEVIWSMVG QATEQGDCSKFK NIPH C K P +VDLLPG PYNQQI+
Sbjct:    70 PGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKGNIPHCCKKTPAIVDLLPGTPYNQQIS 129

Query:   127 NCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVL 186
             NCC+GGV+ +W QDP+ A+SSFQ+SVG+SG++N TVR P+N TL  PG GYTC  AK V 
Sbjct:   130 NCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLKAPGPGYTCGPAKLVK 189

Query:   187 PTAFISADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQN 246
             P+ FISAD RR+TQ+++TWN+TCTYSQ LA K PTCCVS+S+FYN TI PCP+CSCGCQN
Sbjct:   190 PSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTCSCGCQN 249

Query:   247 KNN---CVKSDSDIRSVVGMMNTTTIVAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSI 303
              +    CV  D  I SVV  +    +  PLL CTQHMCPIRVHWHVK +YK+YWRVK++I
Sbjct:   250 SSQAGTCV--DPKIASVVPALGKNNL-EPLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAI 306

Query:   304 TNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQS 363
             TNFNY +NY++W LVVQHPN +N+T++FSFNYKPL PY + NDT M +GIKF+ND L Q+
Sbjct:   307 TNFNYNMNYSQWNLVVQHPNFDNLTKLFSFNYKPLNPYLNINDTAMLWGIKFYNDFLSQA 366

Query:   364 GPEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLPN 414
             GP GNVQSEL+ QK+   FT+++GWAFPR+IYFNGD C MP P+ YP+LPN
Sbjct:   367 GPVGNVQSELLFQKNPLEFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPN 417

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2024377 COBL6 "AT1G09790" [Arabidopsis thaliana (taxid:3702)]

 Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
 Identities = 211/404 (52%), Positives = 281/404 (69%)

Query:    14 FVVALIFSHAVAYDTLDPTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGW 73
             F++ +    A  YD LDP G I IKWD++   P  +   VT+ N Q YRH+ +PGW L W
Sbjct:    24 FMIMIDKMVADGYDPLDPFGKIIIKWDLLLSSPGQHHVQVTLENMQEYRHVEKPGWKLSW 83

Query:    74 TWAKKEVIWSMVGAQATEQGDCSKFKI--NIPHSCMKNPTVVDLLPGVPYNQQIANCCKG 131
              W  +EVIW M GA+ TEQG+CS F    N+PH C++ PT+VDLLPG   N Q+ANCC+G
Sbjct:    84 HWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRG 143

Query:   132 GVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFI 191
             GV+ S  QD +  VS+F ++VG S    +   +P NF +  PG  Y+C  A +V PT F 
Sbjct:   144 GVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNFDIGVPG--YSCDNATSVSPTKFS 201

Query:   192 SADGRRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQNKNNCV 251
             +  GRR+TQA+ TW   C YSQ  +S +P CCVS+S+FY   I PCP+CSCGC + ++CV
Sbjct:   202 TDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCSS-SHCV 260

Query:   252 KSDSDIRSVVGMMNTTTI-VAPLLHCTQHMCPIRVHWHVKLNYKKYWRVKMSITNFNYQV 310
             K D ++   +   +     V+P++ C+ HMCPIR+HWHVK+NY++YWRVK++ TNFN   
Sbjct:   261 K-DGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMK 319

Query:   311 NYTEWTLVVQHPNLNNVTEVFSFNYKPLIPY-DSTNDTGMFYGIKFFNDILLQSGPEGNV 369
             NYT W LVV HPNL +V +VFSFNYK L PY +S NDTGMF+G++F+ND+LLQ G  GNV
Sbjct:   320 NYTNWNLVVLHPNLKSVQQVFSFNYKSLTPYQNSINDTGMFWGVQFYNDVLLQEGKIGNV 379

Query:   370 QSELILQKDMNTFTYKQGWAFPRKIYFNGDECSMPLPEDYPYLP 413
             Q+EL+L+KDM  FT+++GWAFPR+I FNGDEC MP P+D+P LP
Sbjct:   380 QTELLLKKDMGNFTFREGWAFPRRILFNGDECVMPSPDDFPRLP 423

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2173547 COBL5 "COBRA-like protein 5 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 110/205 (53%), Positives = 140/205 (68%)

Query:     9 LFVLTFVVALI-FSHAVAYDTLDPT-GNITIKWDVMSWIPDGYVALVTMTNFQMYRHIME 66
             LF    V+ L+ FS  ++ + L    GNIT+KWD+++W PDGYVA+VT  N+Q  R I  
Sbjct:     4 LFSTMIVLLLVSFSCLISTEALTSNYGNITVKWDLLNWTPDGYVAVVTAYNYQKQRSI-- 61

Query:    67 PGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGVPYNQQIA 126
             PGW + W   KKEVIW+M+GA+ T QG CS FK NIP SC++ PTVVDLLPG P+NQQIA
Sbjct:    62 PGWKMSWRGTKKEVIWNMLGAKTTGQGGCSMFKGNIPQSCVRKPTVVDLLPGTPFNQQIA 121

Query:   127 NCCKGGVVGSWGQDPSAAVSSFQLSVGRSGSSNKTVRLPKNFTLLGPGRGYTCSQAKNVL 186
             NCCK GV+      P +  S+FQLSVG +G+S KT R+P NF    P + Y C  +KNV 
Sbjct:   122 NCCKSGVL-----KPGSE-SAFQLSVGSAGNSVKTARMPANFMFTAPKQQYICGPSKNVR 175

Query:   187 PTAFISADGRRRTQAMMTWNVTCTY 211
             PT F +AD RR T A+MTWN+TC +
Sbjct:   176 PTRFTTADKRRITAALMTWNITCVF 200

GO:0005886 "plasma membrane" evidence=ISM

GO:0050832 "defense response to fungus" evidence=IEP

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

TAIR|locus:2130100 COBL7 "AT4G16120" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
 Identities = 71/234 (30%), Positives = 105/234 (44%)

Query:    33 GNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWT-----WAKKEVIWSMVGA 87
             G++TI +DV+      Y+A VTM N      +     +  W      +  K    S+V +
Sbjct:   217 GDLTIMYDVVRSYSSNYMAQVTMENHNPLGRLDNWKLSFDWMRDEFIYTMKGAYPSIVDS 276

Query:    88 QATEQGDCSKFKINIPHS----CMKNPTVVDLLPGVPYNQQ----IANCCKGGVVGSWGQ 139
                  G  +K   ++  S    C + PTV+DL P   YN      I  CC+ G +     
Sbjct:   277 SDCVDGPQAKHYQDLDFSNVLSCARRPTVIDL-PPTKYNDSTFGLIPFCCRNGTILPRSM 335

Query:   140 DPSAAVSSFQLSVGRSGSSNKTVRL--PKNFTLLGP-GRGYTCSQAKNVLPTAFISADG- 195
             DPS + S FQ+ V +         L  P+N+ + G     Y C     V P+ F+   G 
Sbjct:   336 DPSKSSSVFQMQVYKMPPDLNISALSPPQNWRINGTLNPDYKCGPPVRVSPSQFVDPSGL 395

Query:   196 -RRRTQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGCQ-NK 247
                RT A  +W V C  +Q     +P CCVS S+++N +I PC +C+CGC  NK
Sbjct:   396 PSNRT-AFASWQVVCNITQP-KDASPRCCVSFSAYFNDSIVPCKTCACGCSSNK 447

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=ISS

TAIR|locus:2155889 SHV2 "SHAVEN 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 7.4e-28, Sum P(2) = 7.4e-28
 Identities = 65/230 (28%), Positives = 105/230 (45%)

Query:    33 GNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQAT-- 90
             G++TI +DV+      Y+  VTM N      +    W L + W + E I  M GA  T  
Sbjct:   216 GDLTIMYDVIRAYDQNYLTEVTMENHNPLGRLDH--WELSFDWMRDEFIQKMQGAYPTVV 273

Query:    91 EQGDC-----SKFKINIPHS----CMKNPTVVDLLPGVPYNQQIAN---CCKGGVVGSWG 138
             +   C     S     +  +    C + P ++DL P    +  + N   CC+ G +    
Sbjct:   274 DATKCIFGPQSLIYTGLDFADVLTCERRPIIIDLPPTKKDDSTLGNIPSCCRNGTILPRI 333

Query:   139 QDPSAAVSSFQLSVGRSGSS-NKTVRLP-KNFTLLGP-GRGYTCSQAKNVLPTAFISADG 195
              DPS +VS F + V +     N++   P +N+ + G     Y+C     V PT +    G
Sbjct:   334 MDPSKSVSVFTMQVAKMPPDFNRSALFPPQNWRIKGTLNPDYSCGPPVRVTPTFYPDPSG 393

Query:   196 RRRTQAMM-TWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCGC 244
                 ++   +W + C  +Q   ++ P CCVS S+F+N +I PC +C+CGC
Sbjct:   394 MPTNKSSFASWQIVCNITQA-KTEIPKCCVSFSAFFNDSIIPCNTCACGC 442

GO:0005886 "plasma membrane" evidence=ISM

GO:0009932 "cell tip growth" evidence=IMP

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0031225 "anchored to membrane" evidence=TAS

GO:0048765 "root hair cell differentiation" evidence=RCA;IMP

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0048527 "lateral root development" evidence=RCA

GO:0048589 "developmental growth" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2093673 COBL8 "COBRA-like protein 8 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
 Identities = 66/234 (28%), Positives = 106/234 (45%)

Query:    33 GNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGA--QAT 90
             G++TI +DV       Y A VT+ N  +   +    W L + W K E ++S  GA     
Sbjct:   210 GDLTIMYDVTRAYQSSYSAQVTIENHNLLGRL--DNWDLSFMWMKDEFLFSTKGAYPSVV 267

Query:    91 EQGDC-----SKFKINIPHS----CMKNPTVVDLLPGVPYNQ----QIANCCKGGVVGSW 137
             +  DC     +K+  ++  S    C + P ++DL P   YN     +I  CC+ G +   
Sbjct:   268 DSSDCITGPQAKYYKDLDFSNVMSCARRPHIIDL-PLTKYNDTNVGRIPYCCRNGTILPR 326

Query:   138 GQDPSAAVSSFQLSVGRSGSS-N-KTVRLPKNFTLLGP-GRGYTCSQAKNVLPTAFISAD 194
               DP  + S FQ+ V +     N  ++  P+++ + G     Y C     V  + F    
Sbjct:   327 SMDPEKSKSVFQIEVYKMPPDLNISSITPPQSWQIKGNLNPDYKCGPPLRVSSSQFPDTS 386

Query:   195 GRRRTQ-AMMTWNVTCTYSQILASKNPTCCVSMSSFYNSTITPCPSCSCG-CQN 246
             G    + A  +W V C  +Q      P CCVS SS++N ++ PC +C+CG C +
Sbjct:   387 GLPSNKSAFASWQVVCNITQ---PTPPKCCVSFSSYFNDSVIPCKTCACGGCSS 437

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2085785 COBL10 "COBRA-like protein 10 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
 Identities = 70/254 (27%), Positives = 113/254 (44%)

Query:     4 KRYACLFVLTFVVALIFSHAVAYDTLD---PTGNITIKWDV-MSWIPDGYVALVTMTNFQ 59
             +RY  L ++  V+    S+ +A  T+D   P G +  +W++   W+   ++   TM    
Sbjct:   226 RRYGDLNIVYDVLQSFDSNYLAQVTIDNDNPLGRLD-RWNLTFEWMRGEFIN--TMRG-- 280

Query:    60 MYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKINIPHSCMKNPTVVDLLPGV 119
              Y H  +P           E ++S  G Q  +  D S+       +C + P + DL P  
Sbjct:   281 AYTHKKDPS----------ECLYSKAG-QYYKDLDFSQVM-----NCQRKPAISDLPPEK 324

Query:   120 PYNQQIAN---CCKGGVVGSWGQDPSAAVSSFQLSVGRSGSS-NKTVRLP-KNFTLLGP- 173
               +        CCK G +     DPS + S FQL V +     N+T   P +++ + G  
Sbjct:   325 KEDNMTGKLPFCCKNGTLLPPIMDPSKSRSMFQLQVFKLPPDLNRTALYPPQHWKIDGVL 384

Query:   174 GRGYTCSQAKNVLPTAFISADGRRR-TQAMMTWNVTCTYSQILASKNPTCCVSMSSFYNS 232
                Y C     V P+ F    G    T A+ +W V C  ++  A  +  CCVS S+FYN+
Sbjct:   385 NPQYKCGPPVRVDPSQFPDPSGLLAVTYAISSWQVVCNITKPKAQAS-RCCVSFSAFYNN 443

Query:   233 TITPCPSCSCGCQN 246
             +  PC +C+CGC +
Sbjct:   444 SAVPCNTCACGCND 457

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LFW3	COBL4_ARATH	No assigned EC number	0.7184	0.9383	0.9535	yes	no
Q10JL1	COBL5_ORYSJ	No assigned EC number	0.6282	0.9703	0.9081	yes	no
A2XHZ9	COBL5_ORYSI	No assigned EC number	0.6282	0.9703	0.9081	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	438
pfam04833	169	pfam04833, COBRA, COBRA-like protein	2e-94

>gnl|CDD|218285 pfam04833, COBRA, COBRA-like protein

 Score =  281 bits (721), Expect = 2e-94
 Identities = 104/169 (61%), Positives = 121/169 (71%), Gaps = 4/169 (2%)

Query: 49  YVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFK--INIPHSC 106
           YVA VT+ N+Q YRHI  PGW L W WAKKEVIWSM GA  TEQGDCSKF    + PH C
Sbjct: 1   YVAQVTIENYQPYRHIDNPGWKLSWEWAKKEVIWSMRGAYTTEQGDCSKFYKDGDFPHCC 60

Query: 107 MKNPTVVDLLPGVPYNQQIANCCKGGVVGSWGQDPSAAVSSFQLSVGRS--GSSNKTVRL 164
            K PT+VDL PG PY+QQIANCCK GV+    QDP+ +VS+FQ+SVG++   ++ KTVR 
Sbjct: 61  KKRPTIVDLPPGTPYDQQIANCCKNGVLLPRSQDPAKSVSAFQMSVGKAPPDTNRKTVRP 120

Query: 165 PKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMTWNVTCTYSQ 213
           P+NFT+ GP  GYTC  A  V PT F   DGRR TQA+ TW VTC YSQ
Sbjct: 121 PQNFTIKGPNPGYTCGPAVRVSPTRFPDPDGRRTTQALATWQVTCNYSQ 169

Family of plant proteins are designated COBRA-like (COBL) proteins. The 12 Arabidopsis members of the family are all GPI-liked. Some members of this family are annotated as phytochelatin synthase, but these annotations are incorrect. Length = 169

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	438
PF04833	169	COBRA: COBRA-like protein; InterPro: IPR006918 In	100.0
PF00553	101	CBM_2: Cellulose binding domain; InterPro: IPR0019	95.66
PF00553	101	CBM_2: Cellulose binding domain; InterPro: IPR0019	87.03

>PF04833 COBRA: COBRA-like protein; InterPro: IPR006918 In Arabidopsis thaliana (Mouse-ear cress) members of the family are all extracellular glycosyl-phosphatidyl inositol-anchored proteins (GPI-linked) []

Probab=100.00  E-value=4.2e-85  Score=597.39  Aligned_cols=165  Identities=67%  Similarity=1.240  Sum_probs=162.3

Q ss_pred             eEEEEEEecCcccccccCCCCeEEEEecCCeeEEEeccceeeecCCccccc--CCCCcccCCCCeEEeCCCCCCCCcccc
Q 038127           49 YVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFK--INIPHSCMKNPTVVDLLPGVPYNQQIA  126 (438)
Q Consensus        49 Y~A~VTi~N~q~~r~i~~pgW~L~W~W~~~EvIwsM~GA~~teqgdCs~f~--~~~ph~C~k~P~IvDLpP~~~~n~qi~  126 (438)
                      |+|+|||+|||+|||||.|||+|||+|+|+||||+|+|||++|||||++||  +++||||+|+|+|||||||+++|+|++
T Consensus         1 Y~A~VTi~N~~~yr~id~pgW~L~W~W~~~E~IwsM~GA~~tdqgdCs~~~~~~~~ph~C~k~P~IvDLpp~~~~n~qi~   80 (169)
T PF04833_consen    1 YVAQVTISNYQPYRHIDNPGWNLGWTWAKKEFIWSMKGAQTTDQGDCSKFYKDGDFPHCCKKRPTIVDLPPGTPYNQQIG   80 (169)
T ss_pred             CEEEEEEecCCeecccCCCCceEeeEEcCCEEEEEeeCceeccCCcccccccCCCCCcccCCCCEEEeCCCCCCCccccc
Confidence            999999999999999999999999999999999999999999999999998  689999999999999999999999999


Q ss_pred             ccccCCeeccCCCCcccCcceEEEEEeec--CCCCccccCCcCeEEcCCCCCcccCCCeeeCCccccCCCCcceeeEeEE
Q 038127          127 NCCKGGVVGSWGQDPSAAVSSFQLSVGRS--GSSNKTVRLPKNFTLLGPGRGYTCSQAKNVLPTAFISADGRRRTQAMMT  204 (438)
Q Consensus       127 nCCrgGvl~~~~qDps~s~SsFQm~Vgk~--~~~n~tv~pP~Nf~l~~pgPgYtCg~p~~V~Pt~f~~p~g~r~tqAl~T  204 (438)
                      ||||||||+||+|||+||+|+|||+||++  +++|++++||+||+|++|||||+||+|++|+||+|+|+||||+||||||
T Consensus        81 nCCrgG~l~~~~~Dps~s~S~FQm~Vg~~pp~~~~~~~~~P~nf~l~~~~pgYtCg~~~~V~pT~f~~~~g~r~t~A~~T  160 (169)
T PF04833_consen   81 NCCRGGVLSSWAQDPSKSVSAFQMSVGKAPPGTNNTTVKPPQNFTLGGPGPGYTCGPPKRVSPTVFPDPDGRRTTQALMT  160 (169)
T ss_pred             cccCCCEECCcccChhhCceEEEEEEeEeeccCCCceecCCcceEEcCCCCCcCCCCcceeCCceeeCCCCCEEEEEEEE
Confidence            99999999999999999999999999998  7778889999999999999999999999999999999999999999999


Q ss_pred             EeeEeeeec
Q 038127          205 WNVTCTYSQ  213 (438)
Q Consensus       205 WqVtC~ysq  213 (438)
                      |||||||||
T Consensus       161 WqvtC~ysq  169 (169)
T PF04833_consen  161 WQVTCNYSQ  169 (169)
T ss_pred             EeEEEEeeC
Confidence            999999997

The type example of the family is COBRA (Q94KT8 from SWISSPROT) and the family is generally annotated as COBRA-like (COBL). COBRA is involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. It may act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface. Some members of this family are annotated as phytochelatin synthase, but these annotations are incorrect [].

>PF00553 CBM_2: Cellulose binding domain; InterPro: IPR001919 The microbial degradation of cellulose and xylans requires several types of enzyme such as endoglucanases (3

Probab=95.66  E-value=0.055  Score=45.70  Aligned_cols=56  Identities=29%  Similarity=0.430  Sum_probs=48.1

Q ss_pred             EEEEEEEEeeCCCeEEEEEEecCcccccccCCCCeEEEEecCCeeEEEeccceeeecCC
Q 038127           36 TIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGD   94 (438)
Q Consensus        36 tI~wDV~~~~~~~Y~A~VTi~N~q~~r~i~~pgW~L~W~W~~~EvIwsM~GA~~teqgd   94 (438)
                      |++|.|.+--++||.++|+|.|..- ..|+  ||+|.|+-..++-|-++.+|..+..|.
T Consensus         2 tv~~~v~~~W~~Gf~~~v~v~N~~~-~~i~--~W~v~~~~~~~~~i~~~Wna~~s~~g~   57 (101)
T PF00553_consen    2 TVTYTVTNSWGGGFQGEVTVTNNGS-SPIN--GWTVTFTFPSGQTITSSWNATVSQSGN   57 (101)
T ss_dssp             EEEEEEEEESSSEEEEEEEEEESSS-STEE--SEEEEEEESTTEEEEEEESCEEEEETT
T ss_pred             EEEEEEecccCCCeEEEEEEEECCC-CccC--CEEEEEEeCCCCEEeeeeccEEEecCC
Confidence            6889999888999999999999885 4565  899999999889988999998866443

2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) []. Structurally, cellulases and xylanases generally consist of a catalytic domain joined to a cellulose-binding domain (CBD) by a short linker sequence rich in proline and/or hydroxy-amino acids. The CBD domain is found either at the N-terminal or at the C-terminal extremity of these enzymes. As it is shown in the following schematic representation, there are two conserved cysteines in this CBD domain - one at each extremity of the domain - which have been shown [] to be involved in a disulphide bond. There are also four conserved tryptophan, two are involved in cellulose binding. The CBD of a number of bacterial cellulases has been shown to consist of about 105 amino acid residues [, ]. +-------------------------------------------------+ | | xCxxxxWxxxxxNxxxWxxxxxxxWxxxxxxxxWNxxxxxGxxxxxxxxxxCx 'C': conserved cysteine involved in a disulphide bond. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process; PDB: 2CZN_A 2CWR_A 1HEH_C 1HEJ_C 3NDZ_E 3NDY_E 2XBD_A 1E5C_A 1XBD_A 1E5B_A ....

>PF00553 CBM_2: Cellulose binding domain; InterPro: IPR001919 The microbial degradation of cellulose and xylans requires several types of enzyme such as endoglucanases (3

Probab=87.03  E-value=2.8  Score=35.46  Aligned_cols=99  Identities=18%  Similarity=0.258  Sum_probs=62.5

Q ss_pred             EeEEEeeccccceEEEEEEEecccccCccceeeEeecCCCCCcceEEeeecccCCCCCCCCceeEEEecchhhhHhhhcC
Q 038127          285 VHWHVKLNYKKYWRVKMSITNFNYQVNYTEWTLVVQHPNLNNVTEVFSFNYKPLIPYDSTNDTGMFYGIKFFNDILLQSG  364 (438)
Q Consensus       285 IhWHvk~nYk~~WrvkiTi~N~~~~~ny~~W~lvVqhpn~~~~t~vySFN~t~L~~y~~~NdT~m~~Gl~~yN~ll~~~g  364 (438)
                      +-.-|-.+.-+++.+.|+|+|=. .....+|.+-++.|.-.-+++++  |++.-    ...+++.+-+. .||--|.   
T Consensus         3 v~~~v~~~W~~Gf~~~v~v~N~~-~~~i~~W~v~~~~~~~~~i~~~W--na~~s----~~g~~~~v~~~-~wn~~i~---   71 (101)
T PF00553_consen    3 VTYTVTNSWGGGFQGEVTVTNNG-SSPINGWTVTFTFPSGQTITSSW--NATVS----QSGNTVTVTNP-SWNGTIA---   71 (101)
T ss_dssp             EEEEEEEESSSEEEEEEEEEESS-SSTEESEEEEEEESTTEEEEEEE--SCEEE----EETTEEEEEES-STCSEEE---
T ss_pred             EEEEEecccCCCeEEEEEEEECC-CCccCCEEEEEEeCCCCEEeeee--ccEEE----ecCCEEEEEcC-CcCcccC---
Confidence            55667889999999999999966 36667999999999644455554  44421    12346666664 3443332   


Q ss_pred             CCCceeEEEEEeecCCCcccccCCCCceeeEeeCCcc
Q 038127          365 PEGNVQSELILQKDMNTFTYKQGWAFPRKIYFNGDEC  401 (438)
Q Consensus       365 ~~G~vQSeilf~Kd~~~ft~~~GwaFP~rVyFNGeEC  401 (438)
                       +|.- ..+-|.-..     ....+-|..+-|||..|
T Consensus        72 -~G~s-~~~Gf~~~~-----~~~~~~p~~~t~ng~~C  101 (101)
T PF00553_consen   72 -PGGS-VTFGFQASG-----SGSSAAPSTCTVNGAPC  101 (101)
T ss_dssp             -ESEE-EEEEEEEEE-----SSS--SESEEEETTEEE
T ss_pred             -CCCe-EEEEEEEeC-----CCCCCCCcEEEEcCeeC
Confidence             1322 334444221     22334599999999998

2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) []. Structurally, cellulases and xylanases generally consist of a catalytic domain joined to a cellulose-binding domain (CBD) by a short linker sequence rich in proline and/or hydroxy-amino acids. The CBD domain is found either at the N-terminal or at the C-terminal extremity of these enzymes. As it is shown in the following schematic representation, there are two conserved cysteines in this CBD domain - one at each extremity of the domain - which have been shown [] to be involved in a disulphide bond. There are also four conserved tryptophan, two are involved in cellulose binding. The CBD of a number of bacterial cellulases has been shown to consist of about 105 amino acid residues [, ]. +-------------------------------------------------+ | | xCxxxxWxxxxxNxxxWxxxxxxxWxxxxxxxxWNxxxxxGxxxxxxxxxxCx 'C': conserved cysteine involved in a disulphide bond. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process; PDB: 2CZN_A 2CWR_A 1HEH_C 1HEJ_C 3NDZ_E 3NDY_E 2XBD_A 1E5C_A 1XBD_A 1E5B_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	438
3ndz_E	107	Endoglucanase D; cellotriose, xylanase, carbohydra	95.62
1exg_A	110	EXO-1,4-beta-D-glycanase; cellulose binding domain	93.93
3icg_A	515	Endoglucanase D; cellulase, xylanase, carbohydrate	93.87
1e5b_A	87	Xylanase D; hydrolase, xylan binding domain, beta-	93.15
2cwr_A	103	Chitinase; chitin-binding domain, endoglucanase, h	91.81
1heh_C	88	Endo-1,4-beta-xylanase D; hydrolase(xylan degradat	87.49

>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*

Probab=95.62  E-value=0.038  Score=46.81  Aligned_cols=56  Identities=27%  Similarity=0.412  Sum_probs=46.7

Q ss_pred             EEEEEEEEEeeCCCeEEEEEEecCcccccccCCCCeEEEEecCCeeEEEeccceeeecC
Q 038127           35 ITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQG   93 (438)
Q Consensus        35 itI~wDV~~~~~~~Y~A~VTi~N~q~~r~i~~pgW~L~W~W~~~EvIwsM~GA~~teqg   93 (438)
                      .+++|.|.+--.+||.|+|||.|.-- .-|+  ||+|+|++..++-|-++..|..+..|
T Consensus         3 c~v~y~v~~~W~~Gf~~~vtVtN~g~-~~i~--gWtv~~~~p~g~~it~~Wna~~s~sG   58 (107)
T 3ndz_E            3 VEVTYAITNSWGSGASVNVTIKNNGT-TPIN--GWTLKWTMPINQTITNMWSASFVASG   58 (107)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEECSS-SCEE--SCEEEEECCTTEEEEEEESEEEEEET
T ss_pred             cEEEEEEcccCCCCEEEEEEEEeCCC-Cccc--CcEEEEEcCCCCEEecccceEEEecC
Confidence            47899998888899999999999742 2365  99999999999999999998766543

>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A

Probab=93.93  E-value=0.13  Score=43.24  Aligned_cols=59  Identities=20%  Similarity=0.406  Sum_probs=47.8

Q ss_pred             CCCCEEEEEEEEEeeCCCeEEEEEEecCcccccccCCCCeEEEEecCCeeEEEeccceeeecC
Q 038127           31 PTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQG   93 (438)
Q Consensus        31 p~GnitI~wDV~~~~~~~Y~A~VTi~N~q~~r~i~~pgW~L~W~W~~~EvIwsM~GA~~teqg   93 (438)
                      +.|-.+++|. .+--.+||.|.|||.|.-- .-|+  ||+|.|+...++-|-++..|..+..|
T Consensus         4 ~~~~c~v~y~-~~~W~~Gf~~~vtVtN~g~-~~i~--gWtv~~~~~~g~~i~~~Wna~~s~sG   62 (110)
T 1exg_A            4 GPAGCQVLWG-VNQWNTGFTANVTVKNTSS-APVD--GWTLTFSFPSGQQVTQAWSSTVTQSG   62 (110)
T ss_dssp             CCCCEEEECC-EEESSSEEEEEEEEEECSS-SCEE--SEEEEEECSSSCEEEEEESSEEEEET
T ss_pred             CCCcEEEEEE-eCCCCCCEEEEEEEEeCCC-Cccc--ceEEEEEcCCCcEEecccceEEEccC
Confidence            3477899998 6777899999999999642 2355  99999999999888888888776544

>1e5b_A Xylanase D; hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1e5c_A 1xbd_A 2xbd_A

Probab=93.15  E-value=0.031  Score=45.74  Aligned_cols=51  Identities=16%  Similarity=0.253  Sum_probs=41.3

Q ss_pred             EEEEEEEEeeCCCeEEEEEEecCcccccccCCCCeEEEEecCCeeEEEeccceeeecCC
Q 038127           36 TIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGD   94 (438)
Q Consensus        36 tI~wDV~~~~~~~Y~A~VTi~N~q~~r~i~~pgW~L~W~W~~~EvIwsM~GA~~teqgd   94 (438)
                      +.+|.|.+.-++||.|.|+|.|      +  .||+|.|++..++=|-++..|..+..|.
T Consensus         4 ta~y~v~~~W~~Gf~~~vtVtn------~--~gWtv~~~~~~g~~i~~~Wn~~~s~sg~   54 (87)
T 1e5b_A            4 SVTATRAEEWSDGFNVTYSVSG------S--SAWTVNLALNGSQTIQASWNANVTGSGS   54 (87)
T ss_dssp             CCBCCBCCCCSSEEEEEEBCCS------C--SSCCCEEECCTTCCEEEEESBCCEESSS
T ss_pred             EEEEEECccCCCCEEEEEEEEc------c--CceEEEEEcCCCCEEeeeeceeEecCCC
Confidence            4567776666799999999998      3  4999999999999888888887765443

>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A

Probab=91.81  E-value=0.49  Score=39.76  Aligned_cols=51  Identities=20%  Similarity=0.078  Sum_probs=41.1

Q ss_pred             EEEEEEEeeCCCeEEEEEEecCcccccccCCCCeEEEEecCCeeEEEeccceeeecCC
Q 038127           37 IKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGD   94 (438)
Q Consensus        37 I~wDV~~~~~~~Y~A~VTi~N~q~~r~i~~pgW~L~W~W~~~EvIwsM~GA~~teqgd   94 (438)
                      .+|.+ +-=.+||.|.|||.|--    +  .||+|.|++..++=|-++..|..+..|.
T Consensus        12 c~y~~-n~W~~Gf~~~vtVtN~g----~--~gWtv~~~~~~g~~it~~Wna~~s~sg~   62 (103)
T 2cwr_A           12 LEVKV-NDWGSGAEYDVTLNLDG----Q--YDWTVKVKLAPGATVGSFWSANKQEGNG   62 (103)
T ss_dssp             EEEEE-EECSSEEEEEEEEEESS----C--CCCEEEEEECTTCEEEEEESEEEEEETT
T ss_pred             EEEEE-CCCCCceEEEEEEeCCC----C--CcEEEEEECCCCcEEecccceEEecCCC
Confidence            36764 54578999999999983    3  4999999999999999999888776443

>1heh_C Endo-1,4-beta-xylanase D; hydrolase(xylan degradation), hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1hej_C

Probab=87.49  E-value=0.18  Score=41.39  Aligned_cols=54  Identities=11%  Similarity=0.085  Sum_probs=42.3

Q ss_pred             CCEEEEEEEEEeeCCCeEEEEEEecCcccccccCCCCeEEEEecCCeeEEEeccceeeecCC
Q 038127           33 GNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGD   94 (438)
Q Consensus        33 GnitI~wDV~~~~~~~Y~A~VTi~N~q~~r~i~~pgW~L~W~W~~~EvIwsM~GA~~teqgd   94 (438)
                      |--+.+|.|.+-=.+||.|.|||.     + +  .||+|.|++..++=|-++..|..+..|.
T Consensus         2 g~Ctaty~~~n~W~~Gf~a~vtVt-----g-~--~gWtv~~~~~~gq~vt~~Wna~~s~sg~   55 (88)
T 1heh_C            2 GSCSVSAVRGEEWADRFNVTYSVS-----G-S--SSWVVTLGLNGGQSVQSSWNAALTGSSG   55 (88)
T ss_dssp             CCCCCCCCCCSBCSSEEEEEEECS-----S-C--CSCCCEEECCSSCCCCCEESSEEECSSS
T ss_pred             CceEEEEEEcccCCCceEEEEEEe-----c-c--ccEEEEEECCCCCEEEccccccCccCCC
Confidence            334567777666679999999998     3 2  5999999999999898888887765443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	438
d1exha_	110	Exo-1,4-beta-D-glycanase (cellulase, xylanase), ce	96.84
d1hehc_	88	Endo-1,4-beta xylanase D, xylan binding domain, XB	94.46
d1e5ba_	87	Endo-1,4-beta xylanase D, xylan binding domain, XB	93.53

>d1exha_ b.2.2.1 (A:) Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD {Cellulomonas fimi [TaxId: 1708]}

class: All beta proteins
fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
superfamily: Carbohydrate-binding domain
family: Cellulose-binding domain family II
domain: Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD
species: Cellulomonas fimi [TaxId: 1708]

Probab=96.84  E-value=0.0013  Score=54.13  Aligned_cols=60  Identities=23%  Similarity=0.500  Sum_probs=50.1

Q ss_pred             CCCCEEEEEEEEEeeCCCeEEEEEEecCcccccccCCCCeEEEEecCCeeEEEeccceeeecCC
Q 038127           31 PTGNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGD   94 (438)
Q Consensus        31 p~GnitI~wDV~~~~~~~Y~A~VTi~N~q~~r~i~~pgW~L~W~W~~~EvIwsM~GA~~teqgd   94 (438)
                      ..+-.++.|.+-+| .+||.|.|||.|.-. .-|+  ||+|+|++..+|-|-++.+|..+..|+
T Consensus         4 ~p~~c~v~y~~n~W-~~Gf~~~vtVtN~~~-~~~~--gW~v~~~~p~g~~i~~~Wna~~~~~G~   63 (110)
T d1exha_           4 GPAGCQVLWGVNQW-NTGFTANVTVKNTSS-APVD--GWTLTFSFPSGQQVTQAWSSTVTQSGS   63 (110)
T ss_dssp             CCCCEEEECCEEEC-SSCEEEEEEEEECSS-SCEE--SEEEEEECSSCCEEEEEESSEEEEETT
T ss_pred             CCcceEEEEEEccC-CCCcEEEEEEEeCCC-Cccc--CcEEEEECCCCCEEeeeeceEEEecCC
Confidence            34668999988666 689999999999875 5565  999999999999999999998766554

>d1hehc_ b.2.2.1 (C:) Endo-1,4-beta xylanase D, xylan binding domain, XBD {Cellulomonas fimi [TaxId: 1708]}

class: All beta proteins
fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
superfamily: Carbohydrate-binding domain
family: Cellulose-binding domain family II
domain: Endo-1,4-beta xylanase D, xylan binding domain, XBD
species: Cellulomonas fimi [TaxId: 1708]

Probab=94.46  E-value=0.005  Score=48.90  Aligned_cols=54  Identities=11%  Similarity=0.077  Sum_probs=45.6

Q ss_pred             CCEEEEEEEEEeeCCCeEEEEEEecCcccccccCCCCeEEEEecCCeeEEEeccceeeecCC
Q 038127           33 GNITIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGD   94 (438)
Q Consensus        33 GnitI~wDV~~~~~~~Y~A~VTi~N~q~~r~i~~pgW~L~W~W~~~EvIwsM~GA~~teqgd   94 (438)
                      |.-+.+|.|.+-=.+||.|+|+|.|.      .  ||+|.|+...++=|-++.+|.-+.+|.
T Consensus         2 g~Ctaty~v~~~W~~Gf~a~vtVtn~------s--gWtv~~t~p~g~~i~~~Wna~~s~sg~   55 (88)
T d1hehc_           2 GSCSVSAVRGEEWADRFNVTYSVSGS------S--SWVVTLGLNGGQSVQSSWNAALTGSSG   55 (88)
T ss_dssp             CCCCCCCCCCSBCSSEEEEEEECSSC------C--SCCCEEECCSSCCCCCEESSEEECSSS
T ss_pred             CceEEEEEecccCCCCeEEEEEEEeC------C--CCEEEEECCCCCEEEccccceEccCCC
Confidence            56677888888889999999999984      3  999999999999999999988766544

>d1e5ba_ b.2.2.1 (A:) Endo-1,4-beta xylanase D, xylan binding domain, XBD {Cellulomonas fimi [TaxId: 1708]}

class: All beta proteins
fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
superfamily: Carbohydrate-binding domain
family: Cellulose-binding domain family II
domain: Endo-1,4-beta xylanase D, xylan binding domain, XBD
species: Cellulomonas fimi [TaxId: 1708]

Probab=93.53  E-value=0.011  Score=46.75  Aligned_cols=51  Identities=16%  Similarity=0.241  Sum_probs=42.0

Q ss_pred             EEEEEEEEeeCCCeEEEEEEecCcccccccCCCCeEEEEecCCeeEEEeccceeeecCC
Q 038127           36 TIKWDVMSWIPDGYVALVTMTNFQMYRHIMEPGWTLGWTWAKKEVIWSMVGAQATEQGD   94 (438)
Q Consensus        36 tI~wDV~~~~~~~Y~A~VTi~N~q~~r~i~~pgW~L~W~W~~~EvIwsM~GA~~teqgd   94 (438)
                      +.+|-+.+--++||.|+||+.|      ++  ||+|.|+...++-|-++.+|..+..|.
T Consensus         4 taty~~~~~W~~Gf~a~vtVtn------~~--gWtv~~~~~~g~~I~~~Wn~~~s~sG~   54 (87)
T d1e5ba_           4 SVTATRAEEWSDGFNVTYSVSG------SS--AWTVNLALNGSQTIQASWNANVTGSGS   54 (87)
T ss_dssp             CCBCCBCCCCSSEEEEEEBCCS------CS--SCCCEEECCTTCCEEEEESBCCEESSS
T ss_pred             EEEEEEeccCCCCEEEEEEEEe------cC--CCEEEEECCCCCEEEcccceEEecCCC
Confidence            3456666667899999999988      33  999999999999999999998776554