Citrus Sinensis ID: 038289

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220------
MGITIQYCGCRKLIGARFYSIPLTSNNHNTTRTTLAGSPRDSVGHGTHTASTAAGAHVANASYFGLARGTARGGSPSSRIASYKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKTIKGSAISLSNLSSSMTYPIAFGKDIAAKFAPVSEARTC
cccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccEEEEEEEccccccHHHHHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccccccccEEEEEcccccccEEEEEEEccccEEEEEEEEccccccccEEEEEEccccccccccccccccc
cccccccccccHEEEHHHHccccEHccccccccccccccccccccccccHccccccccccccEEEcccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHccccEEEEEEcccccccccHcccHHHHHHHHHHHccEEEEEEccccccccccEEccccEEEEEEccccccccccEEEEccccEEEEEEEcccccccccccEEEEccccccccccHHHHccc
mgitiqycgcrkligarfysipltsnnhnttrttlagsprdsvghgthtastaagahVANASYFglargtarggspssriasykacsedgcsgSAILQAMDDAIADGVDIISISIGMSslfqsdylndpiaigaFHAEQMGVMVICsagndgpdpstvvntapwiftvgassidrdfqstvllgngktikgsaislsnlsssmtypiafgkdiaakfapvseartc
mgitiqycGCRKLIGARFYSipltsnnhnttrttLAGSPRDSVGHGTHTASTAAGAHVANASYFGLARGTARGGSPSSRIASYKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKTIKGSAISLSNLSSSMTYPIAFGKDIAAKFAPVSEARTC
MGITIQYCGCRKLIGARFYSIPLTSNNHNTTRTTLAGSPRDSvghgthtastaagahvanasYFGLARGTARGGSPSSRIASYKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKTIKGsaislsnlsssMTYPIAFGKDIAAKFAPVSEARTC
**ITIQYCGCRKLIGARFYSIPLT*******************************AHVANASYFGLA***************YKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKTIKGSAISLSNLSSSMTYPIAFGKDIAAKF*********
*GITIQYCGCRKLIGARFYSIPLTSNNHNTTR*TLAGSPRDSVGHGTHTASTAAGAHVANASYFGLARGTARGGSPSSRIASYKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKTIKGSAISLSNLSSSMTYPIAFGKDIAAKFAPV*EARTC
MGITIQYCGCRKLIGARFYSIPLTSNNHNTTRTTLAGSPRDSVGHGTHTASTAAGAHVANASYFGLAR********************DGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKTIKGSAISLSNLSSSMTYPIAFGKDIAAKFAPVSEARTC
****IQYCGCRKLIGARFYSIPLTSNN*******************THTASTAAGAHVANASYFGLARGTARGGSPSSRIASYKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKTIKGSAISLSNLSSSMTYPIAFGKDI*************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGITIQYCGCRKLIGARFYSIPLTSNNHNTTRTTLAGSPRDSVGHGTHTASTAAGAHVANASYFGLARGTARGGSPSSRIASYKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKTIKGSAISLSNLSSSMTYPIAFGKDIAAKFAPVSEARTC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query226 2.2.26 [Sep-21-2011]
Q39547 731 Cucumisin OS=Cucumis melo N/A no 0.898 0.277 0.472 2e-45
O65351 757 Subtilisin-like protease no no 0.800 0.239 0.510 2e-43
Q9LLL8 749 Xylem serine proteinase 1 no no 0.933 0.281 0.452 2e-38
O64495 775 Subtilisin-like protease no no 0.783 0.228 0.471 2e-37
P72186 1398 Pyrolysin OS=Pyrococcus f no no 0.579 0.093 0.278 8e-07
P16396 645 Minor extracellular prote yes no 0.442 0.155 0.310 5e-06
O31788442 Serine protease AprX OS=B no no 0.557 0.285 0.272 1e-05
P29141 806 Minor extracellular prote no no 0.566 0.158 0.288 2e-05
P11018319 Major intracellular serin no no 0.539 0.382 0.319 0.0004
Q14703 1052 Membrane-bound transcript yes no 0.517 0.111 0.244 0.0005
>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1 Back     alignment and function desciption
 Score =  182 bits (461), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/218 (47%), Positives = 139/218 (63%), Gaps = 15/218 (6%)

Query: 11  RKLIGARFYSI--PLTSNNHNTTRTTLAGSPRDSVGHGTHTASTAAGAHVANASYFGLAR 68
           RK+IGAR Y I  P++  + N         PRD+ GHGTHTASTAAG  V+ A+ +GL  
Sbjct: 176 RKIIGARSYHIGRPISPGDVN--------GPRDTNGHGTHTASTAAGGLVSQANLYGLGL 227

Query: 69  GTARGGSPSSRIASYKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLND 128
           GTARGG P +RIA+YK C  DGCS + IL A DDAIADGVDIIS+S+G ++     Y  D
Sbjct: 228 GTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDIISLSVGGAN--PRHYFVD 285

Query: 129 PIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKT 188
            IAIG+FHA + G++   SAGN GP+  T  + +PW+ +V AS++DR F + V +GNG++
Sbjct: 286 AIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQS 345

Query: 189 IKGSAISLSNLSSSMTYPIAFGKDIAAKFAPVSEARTC 226
            +G +I   N   +  YP+  G+DI       S +R C
Sbjct: 346 FQGVSI---NTFDNQYYPLVSGRDIPNTGFDKSTSRFC 380

Cucumis melo (taxid: 3656)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: 2EC: 5
>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1 Back     alignment and function description
>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1 Back     alignment and function description
>sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1 Back     alignment and function description
>sp|P72186|PLS_PYRFU Pyrolysin OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pls PE=1 SV=2 Back     alignment and function description
>sp|P16396|SUBE_BACSU Minor extracellular protease epr OS=Bacillus subtilis (strain 168) GN=epr PE=2 SV=1 Back     alignment and function description
>sp|O31788|APRX_BACSU Serine protease AprX OS=Bacillus subtilis (strain 168) GN=aprX PE=1 SV=1 Back     alignment and function description
>sp|P29141|SUBV_BACSU Minor extracellular protease vpr OS=Bacillus subtilis (strain 168) GN=vpr PE=1 SV=1 Back     alignment and function description
>sp|P11018|ISP1_BACSU Major intracellular serine protease OS=Bacillus subtilis (strain 168) GN=isp PE=1 SV=2 Back     alignment and function description
>sp|Q14703|MBTP1_HUMAN Membrane-bound transcription factor site-1 protease OS=Homo sapiens GN=MBTPS1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query226
225465381 777 PREDICTED: subtilisin-like protease [Vit 0.955 0.277 0.710 1e-86
255569223 777 Xylem serine proteinase 1 precursor, put 0.955 0.277 0.737 7e-85
356554917 777 PREDICTED: subtilisin-like protease-like 0.955 0.277 0.708 8e-81
356546290 778 PREDICTED: subtilisin-like protease-like 0.955 0.277 0.699 1e-80
224073086 741 predicted protein [Populus trichocarpa] 0.995 0.303 0.713 6e-80
449458133 733 PREDICTED: subtilisin-like protease-like 0.951 0.293 0.724 9e-79
449516513 738 PREDICTED: subtilisin-like protease-like 0.951 0.291 0.724 1e-78
414877062 782 TPA: putative subtilase family protein [ 0.955 0.276 0.639 5e-74
226501772 803 uncharacterized protein LOC100279461 pre 0.955 0.268 0.639 1e-73
242057023 790 hypothetical protein SORBIDRAFT_03g01130 0.955 0.273 0.630 3e-73
>gi|225465381|ref|XP_002273703.1| PREDICTED: subtilisin-like protease [Vitis vinifera] gi|296085427|emb|CBI29159.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 157/221 (71%), Positives = 186/221 (84%), Gaps = 5/221 (2%)

Query: 11  RKLIGARFYSIPL-----TSNNHNTTRTTLAGSPRDSVGHGTHTASTAAGAHVANASYFG 65
           RKLIGAR+Y+ P       S+++ +    L GSPRDSVGHGTHTAS AAGA +ANASY+G
Sbjct: 187 RKLIGARYYNTPKALIQPKSSSNKSHPINLTGSPRDSVGHGTHTASIAAGAPIANASYYG 246

Query: 66  LARGTARGGSPSSRIASYKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDY 125
           LA GTARGGSPS+RIASYKACS +GCSGS I++A DDAI DGVDIIS+SIGM+S+FQSD+
Sbjct: 247 LAPGTARGGSPSARIASYKACSLEGCSGSTIMKAFDDAIKDGVDIISVSIGMTSIFQSDF 306

Query: 126 LNDPIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGN 185
           LNDPIAIGAFHA+QMGVMV+CSAGN GPDP T+VN+APWIFTV AS+IDRDFQSTV+LGN
Sbjct: 307 LNDPIAIGAFHAQQMGVMVVCSAGNSGPDPYTIVNSAPWIFTVAASNIDRDFQSTVVLGN 366

Query: 186 GKTIKGSAISLSNLSSSMTYPIAFGKDIAAKFAPVSEARTC 226
           GKT  G AI+ SNL+ S TYP+A  +D+AA F P S+AR+C
Sbjct: 367 GKTFPGPAINFSNLTRSKTYPLARSEDVAAAFTPSSDARSC 407

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255569223|ref|XP_002525580.1| Xylem serine proteinase 1 precursor, putative [Ricinus communis] gi|223535159|gb|EEF36839.1| Xylem serine proteinase 1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356554917|ref|XP_003545787.1| PREDICTED: subtilisin-like protease-like [Glycine max] Back     alignment and taxonomy information
>gi|356546290|ref|XP_003541562.1| PREDICTED: subtilisin-like protease-like [Glycine max] Back     alignment and taxonomy information
>gi|224073086|ref|XP_002303965.1| predicted protein [Populus trichocarpa] gi|222841397|gb|EEE78944.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449458133|ref|XP_004146802.1| PREDICTED: subtilisin-like protease-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449516513|ref|XP_004165291.1| PREDICTED: subtilisin-like protease-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|414877062|tpg|DAA54193.1| TPA: putative subtilase family protein [Zea mays] Back     alignment and taxonomy information
>gi|226501772|ref|NP_001145938.1| uncharacterized protein LOC100279461 precursor [Zea mays] gi|219885021|gb|ACL52885.1| unknown [Zea mays] Back     alignment and taxonomy information
>gi|242057023|ref|XP_002457657.1| hypothetical protein SORBIDRAFT_03g011300 [Sorghum bicolor] gi|241929632|gb|EES02777.1| hypothetical protein SORBIDRAFT_03g011300 [Sorghum bicolor] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query226
TAIR|locus:2198656 769 ATSBT5.2 "AT1G20160" [Arabidop 0.911 0.267 0.481 2.1e-47
TAIR|locus:2153291 736 SBT4.12 "AT5G59090" [Arabidops 0.884 0.271 0.431 2e-39
TAIR|locus:2198606 780 AT1G20150 "AT1G20150" [Arabido 0.911 0.264 0.431 6.8e-39
TAIR|locus:2168434 732 SBT4.13 "AT5G59120" [Arabidops 0.876 0.270 0.432 2.3e-37
TAIR|locus:2153296 741 AT5G59100 "AT5G59100" [Arabido 0.893 0.272 0.409 2.4e-37
UNIPROTKB|Q0JK21 741 Os01g0702300 "Os01g0702300 pro 0.938 0.286 0.396 3e-36
TAIR|locus:2102792 738 AT3G46840 "AT3G46840" [Arabido 0.871 0.266 0.429 8e-36
UNIPROTKB|Q6K7G5 782 OJ1293_A01.13 "Putative subtil 0.946 0.273 0.391 9.7e-36
TAIR|locus:2154528 713 AT5G58840 "AT5G58840" [Arabido 0.561 0.178 0.581 1.5e-35
TAIR|locus:2144583 766 AT5G03620 "AT5G03620" [Arabido 0.699 0.206 0.503 1.5e-35
TAIR|locus:2198656 ATSBT5.2 "AT1G20160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 500 (181.1 bits), Expect = 2.1e-47, P = 2.1e-47
 Identities = 105/218 (48%), Positives = 133/218 (61%)

Query:    11 RKLIGARFYSIPLTSNNHNTTRTTLAGSPRDSXXXXXXXXXXXXXXXXXXXXYFGLARGT 70
             RK+IGAR+Y  P   + + TTR  +      S                    Y+G+A GT
Sbjct:   184 RKIIGARYYKNPDDDSEYYTTRDVIGHGSHVSSTIAGSAVENAS--------YYGVASGT 235

Query:    71 ARGGSPSSRIASYKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPI 130
             A+GGS ++RIA YK C+  GC+GS+IL A DDAIADGVD++S+S+G  +  + D   DPI
Sbjct:   236 AKGGSQNARIAMYKVCNPGGCTGSSILAAFDDAIADGVDVLSLSLGAPAYARIDLNTDPI 295

Query:   131 AIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKTIK 190
             AIGAFHA + G++VICSAGNDGPD  TV NTAPWI TV A++IDRDF+S V+LG  K IK
Sbjct:   296 AIGAFHAVEQGILVICSAGNDGPDGGTVTNTAPWIMTVAANTIDRDFESDVVLGGNKVIK 355

Query:   191 GXXXXXXXXXXXMTYPIAFGKDIAAKFAPVSE--ARTC 226
             G             YP+  GK  +AK A  SE  AR C
Sbjct:   356 GEGIHFSNVSKSPVYPLIHGK--SAKSADASEGSARAC 391
GO:0004252 "serine-type endopeptidase activity" evidence=IEA;IBA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IBA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008152 "metabolic process" evidence=IBA
GO:0042802 "identical protein binding" evidence=IEA
GO:0043086 "negative regulation of catalytic activity" evidence=IEA
GO:0048046 "apoplast" evidence=IDA
TAIR|locus:2153291 SBT4.12 "AT5G59090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198606 AT1G20150 "AT1G20150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168434 SBT4.13 "AT5G59120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153296 AT5G59100 "AT5G59100" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q0JK21 Os01g0702300 "Os01g0702300 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2102792 AT3G46840 "AT3G46840" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6K7G5 OJ1293_A01.13 "Putative subtilisin-like proteinase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2154528 AT5G58840 "AT5G58840" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144583 AT5G03620 "AT5G03620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.21LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00033954001
SubName- Full=Chromosome undetermined scaffold_71, whole genome shotgun sequence; (741 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query226
cd04852307 cd04852, Peptidases_S8_3, Peptidase S8 family doma 5e-70
cd07474295 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid 2e-20
cd07487264 cd07487, Peptidases_S8_1, Peptidase S8 family doma 2e-16
cd00306241 cd00306, Peptidases_S8_S53, Peptidase domain in th 9e-15
cd07490254 cd07490, Peptidases_S8_6, Peptidase S8 family doma 2e-13
cd07475346 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 4e-13
cd07489312 cd07489, Peptidases_S8_5, Peptidase S8 family doma 8e-12
pfam00082277 pfam00082, Peptidase_S8, Subtilase family 2e-11
cd07477229 cd07477, Peptidases_S8_Subtilisin_subset, Peptidas 6e-11
cd07482294 cd07482, Peptidases_S8_Lantibiotic_specific_protea 1e-08
cd04848267 cd04848, Peptidases_S8_Autotransporter_serine_prot 2e-08
cd04077255 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Pep 2e-08
cd07473259 cd07473, Peptidases_S8_Subtilisin_like, Peptidase 2e-08
cd07484260 cd07484, Peptidases_S8_Thermitase_like, Peptidase 4e-08
cd07481264 cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep 4e-07
cd04842293 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 4e-07
cd07480297 cd07480, Peptidases_S8_12, Peptidase S8 family dom 2e-06
cd07479255 cd07479, Peptidases_S8_SKI-1_like, Peptidase S8 fa 2e-06
cd04857412 cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_ 1e-05
cd07493261 cd07493, Peptidases_S8_9, Peptidase S8 family doma 1e-05
TIGR03921 350 TIGR03921, T7SS_mycosin, type VII secretion-associ 5e-05
COG1404 508 COG1404, AprE, Subtilisin-like serine proteases [P 6e-05
cd07476267 cd07476, Peptidases_S8_thiazoline_oxidase_subtilis 0.002
cd07497311 cd07497, Peptidases_S8_14, Peptidase S8 family dom 0.002
>gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information 
 Score =  215 bits (551), Expect = 5e-70
 Identities = 89/164 (54%), Positives = 100/164 (60%), Gaps = 5/164 (3%)

Query: 11  RKLIGARFYSIPLTSNNHNTTRTTLAGSPRDSVGHGTHTASTAAGAHVANASYFGLARGT 70
            KLIGAR++S                 SPRD  GHGTHTASTAAG  V NAS  G A GT
Sbjct: 77  NKLIGARYFS-DGYDAYGGFNSDGEYRSPRDYDGHGTHTASTAAGNVVVNASVGGFAFGT 135

Query: 71  ARGGSPSSRIASYKACSED-GCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDP 129
           A G +P +RIA YK C  D GC GS IL A+D AIADGVD+IS SIG  S    D   DP
Sbjct: 136 ASGVAPRARIAVYKVCWPDGGCFGSDILAAIDQAIADGVDVISYSIGGGS---PDPYEDP 192

Query: 130 IAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSI 173
           IAI   HA + G+ V  SAGN GP  STV N APW+ TV AS++
Sbjct: 193 IAIAFLHAVEAGIFVAASAGNSGPGASTVPNVAPWVTTVAASTL 236

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 307
>gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families Back     alignment and domain information
>gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>gnl|CDD|173814 cd07489, Peptidases_S8_5, Peptidase S8 family domain, uncharacterized subfamily 5 Back     alignment and domain information
>gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family Back     alignment and domain information
>gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>gnl|CDD|173808 cd07482, Peptidases_S8_Lantibiotic_specific_protease, Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases Back     alignment and domain information
>gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>gnl|CDD|173790 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins Back     alignment and domain information
>gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>gnl|CDD|173805 cd07479, Peptidases_S8_SKI-1_like, Peptidase S8 family domain in SKI-1-like proteins Back     alignment and domain information
>gnl|CDD|173796 cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_II, Peptidase S8 family domain in Tripeptidyl aminopeptidases_II Back     alignment and domain information
>gnl|CDD|173818 cd07493, Peptidases_S8_9, Peptidase S8 family domain, uncharacterized subfamily 9 Back     alignment and domain information
>gnl|CDD|234398 TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin Back     alignment and domain information
>gnl|CDD|224322 COG1404, AprE, Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|173802 cd07476, Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease, Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases Back     alignment and domain information
>gnl|CDD|173821 cd07497, Peptidases_S8_14, Peptidase S8 family domain, uncharacterized subfamily 14 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 226
cd07491247 Peptidases_S8_7 Peptidase S8 family domain, unchar 100.0
cd04852307 Peptidases_S8_3 Peptidase S8 family domain, unchar 99.98
cd07479255 Peptidases_S8_SKI-1_like Peptidase S8 family domai 99.97
cd05561239 Peptidases_S8_4 Peptidase S8 family domain, unchar 99.97
cd07496285 Peptidases_S8_13 Peptidase S8 family domain, uncha 99.97
PTZ00262639 subtilisin-like protease; Provisional 99.97
cd07483291 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 fa 99.97
cd07476267 Peptidases_S8_thiazoline_oxidase_subtilisin-like_p 99.97
cd07485273 Peptidases_S8_Fervidolysin_like Peptidase S8 famil 99.97
cd07498242 Peptidases_S8_15 Peptidase S8 family domain, uncha 99.97
cd07493261 Peptidases_S8_9 Peptidase S8 family domain, unchar 99.97
cd07484260 Peptidases_S8_Thermitase_like Peptidase S8 family 99.97
cd07482294 Peptidases_S8_Lantibiotic_specific_protease Peptid 99.97
KOG1153501 consensus Subtilisin-related protease/Vacuolar pro 99.97
cd07477229 Peptidases_S8_Subtilisin_subset Peptidase S8 famil 99.97
cd07490254 Peptidases_S8_6 Peptidase S8 family domain, unchar 99.96
cd07481264 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 99.96
cd04077255 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 99.96
cd07497311 Peptidases_S8_14 Peptidase S8 family domain, uncha 99.96
cd07487264 Peptidases_S8_1 Peptidase S8 family domain, unchar 99.96
cd07489312 Peptidases_S8_5 Peptidase S8 family domain, unchar 99.95
cd04847291 Peptidases_S8_Subtilisin_like_2 Peptidase S8 famil 99.95
cd07473259 Peptidases_S8_Subtilisin_like Peptidase S8 family 99.95
cd07475346 Peptidases_S8_C5a_Peptidase Peptidase S8 family do 99.95
cd07474295 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 fam 99.95
cd05562275 Peptidases_S53_like Peptidase domain in the S53 fa 99.95
cd04857412 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptid 99.95
cd07492222 Peptidases_S8_8 Peptidase S8 family domain, unchar 99.94
cd07480297 Peptidases_S8_12 Peptidase S8 family domain, uncha 99.94
cd04843277 Peptidases_S8_11 Peptidase S8 family domain, uncha 99.94
cd04848267 Peptidases_S8_Autotransporter_serine_protease_like 99.93
cd04842293 Peptidases_S8_Kp43_protease Peptidase S8 family do 99.93
PF00082282 Peptidase_S8: Subtilase family This is family S8 i 99.93
cd07494298 Peptidases_S8_10 Peptidase S8 family domain, uncha 99.92
cd04059297 Peptidases_S8_Protein_convertases_Kexins_Furin-lik 99.92
cd07488247 Peptidases_S8_2 Peptidase S8 family domain, unchar 99.91
cd00306241 Peptidases_S8_S53 Peptidase domain in the S8 and S 99.89
cd07478 455 Peptidases_S8_CspA-like Peptidase S8 family domain 99.89
KOG1114 1304 consensus Tripeptidyl peptidase II [Posttranslatio 99.81
KOG4266 1033 consensus Subtilisin kexin isozyme-1/site 1 protea 99.81
COG1404 508 AprE Subtilisin-like serine proteases [Posttransla 99.67
cd04056 361 Peptidases_S53 Peptidase domain in the S53 family. 99.43
KOG3526 629 consensus Subtilisin-like proprotein convertase [P 98.75
COG4934 1174 Predicted protease [Posttranslational modification 95.76
KOG3525 431 consensus Subtilisin-like proprotein convertase [P 90.53
>cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7 Back     alignment and domain information 
Probab=100.00  E-value=5.5e-33  Score=237.04  Aligned_cols=195  Identities=21%  Similarity=0.245  Sum_probs=155.4

Q ss_pred             ccccccCCC-CceEEEEEcCCCcccCCCCCCCCCCCCCCCCCCCChHHHHHHhhccCCCCCcccccCCCcccccCCCCeE
Q 038289            2 GITIQYCGC-RKLIGARFYSIPLTSNNHNTTRTTLAGSPRDSVGHGTHTASTAAGAHVANASYFGLARGTARGGSPSSRI   80 (226)
Q Consensus         2 gi~~~~~~~-~k~~g~~~f~~~~~~~~~~~~~~~~~~~~~d~~gHGThvAgiiag~~~~~~~~~g~~~~~~~GvAP~a~l   80 (226)
                      ||+.+|++. .+++..++|.....+.      ....+...|..||||||||||+                  |+||+++|
T Consensus        13 Gvd~~hpdl~~~i~~~~~~~~~~~~~------~~~~~~~~d~~gHGT~vAgiI~------------------gvap~a~i   68 (247)
T cd07491          13 GVDILDSDLQGKIIGGKSFSPYEGDG------NKVSPYYVSADGHGTAMARMIC------------------RICPSAKL   68 (247)
T ss_pred             CcCCCchhhccccccCCCCCCCCCCc------ccCCCCCCCCCCcHHHHHHHHH------------------HHCCCCeE
Confidence            889999998 4567777887654321      1112234578999999999996                  78999999


Q ss_pred             EEEeecCCCC-------CCHHHHHHHHHHHHHCCCcEEEEcccCCCCCCCCCCccHHHHHHHHHhcCCcEEEEecCCCCC
Q 038289           81 ASYKACSEDG-------CSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGP  153 (226)
Q Consensus        81 ~~~rv~~~~~-------~~~~~~~~ai~~a~~~g~~VinlS~G~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~  153 (226)
                      +++|++...+       +....+++||+||+++++||||||||.............+..++++|.++|++||+||||++.
T Consensus        69 ~~~kv~~~~~~~~~~~~~~~~~i~~Ai~~Ai~~gadIIn~S~g~~~~~~~~~~~~~l~~ai~~A~~~GilvvaaAGN~g~  148 (247)
T cd07491          69 YVIKLEDRPSPDSNKRSITPQSAAKAIEAAVEKKVDIISMSWTIKKPEDNDNDINELENAIKEALDRGILLFCSASDQGA  148 (247)
T ss_pred             EEEEecccCCCCCcccccCHHHHHHHHHHHHHCCCcEEEeeeecccccccccchHHHHHHHHHHHhCCeEEEEecCCCCC
Confidence            9999998643       457889999999999999999999997652111123466777889999999999999999998


Q ss_pred             CCC-C--CCCCCCCeEEEeceecCCccccceeeCCCeeE--ecccccccCC-CCCCeeeeEEcCCCCCCCCCc
Q 038289          154 DPS-T--VVNTAPWIFTVGASSIDRDFQSTVLLGNGKTI--KGSAISLSNL-SSSMTYPIAFGKDIAAKFAPV  220 (226)
Q Consensus       154 ~~~-~--~~~~~p~vitVgA~~~~~~~~~~s~~G~~~~i--~g~~i~~~~~-~~~~~~~~v~~~~~~~~~~~~  220 (226)
                      ... .  .++..|+||+|||++.++.++.|+++|..+.+  ||+.|.+... .....|....|||+++|.+++
T Consensus       149 ~~~~~~~~pa~~~~Vi~VgA~~~~g~~~~~S~~g~~vd~~APG~~i~s~~~~~~~~~~~~~sGTS~Atp~vaG  221 (247)
T cd07491         149 FTGDTYPPPAARDRIFRIGAADEDGGADAPVGDEDRVDYILPGENVEARDRPPLSNSFVTHTGSSVATALAAG  221 (247)
T ss_pred             cCCCcccCcccCCCeEEEEeeCCCCCCccccCCCCcceEEeCCCceecCCcCCCCCCeeeeccHHHHHHHHHH
Confidence            754 3  34567999999999999999999999988766  8888877764 335789999999999998765

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
>cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information
>cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins Back     alignment and domain information
>cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4 Back     alignment and domain information
>cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13 Back     alignment and domain information
>PTZ00262 subtilisin-like protease; Provisional Back     alignment and domain information
>cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins Back     alignment and domain information
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases Back     alignment and domain information
>cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin Back     alignment and domain information
>cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15 Back     alignment and domain information
>cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9 Back     alignment and domain information
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases Back     alignment and domain information
>KOG1153 consensus Subtilisin-related protease/Vacuolar protease B [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins Back     alignment and domain information
>cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14 Back     alignment and domain information
>cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5 Back     alignment and domain information
>cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>cd05562 Peptidases_S53_like Peptidase domain in the S53 family Back     alignment and domain information
>cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II Back     alignment and domain information
>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8 Back     alignment and domain information
>cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11 Back     alignment and domain information
>cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification Back     alignment and domain information
>cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10 Back     alignment and domain information
>cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases Back     alignment and domain information
>cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2 Back     alignment and domain information
>cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families Back     alignment and domain information
>cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins Back     alignment and domain information
>KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04056 Peptidases_S53 Peptidase domain in the S53 family Back     alignment and domain information
>KOG3526 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4934 Predicted protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3525 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query226
3vta_A 621 Crystal Structure Of Cucumisin, A Subtilisin-Like E 4e-35
3i6s_A 649 Crystal Structure Of The Plant Subtilisin-Like Prot 2e-24
>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like Endoprotease From Cucumis Melo L Length = 621 Back     alignment and structure 
Iteration: 1

 Score =  144 bits (363), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/218 (39%), Positives = 119/218 (54%), Gaps = 15/218 (6%)
Query: 11  RKLIGARFYSI--PLTSNNHNTTRTTLAGSPRDSXXXXXXXXXXXXXXXXXXXXYFGLAR 68
           RK+IGAR Y I  P++  + N         PRD+                     +GL  
Sbjct: 66  RKIIGARSYHIGRPISPGDVN--------GPRDTNGHGTHTASTAAGGLVSQANLYGLGL 117
Query: 69  GTARGGSPSSRIASYKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLND 128
           GTARGG P +RIA+YK C  DGCS + IL A DDAIADGVDIIS+S+G ++     Y  D
Sbjct: 118 GTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDIISLSVGGAN--PRHYFVD 175
Query: 129 PIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKT 188
            IAIG+FHA + G++   SAGN GP+  T  + +PW+ +V AS++DR F + V +GNG++
Sbjct: 176 AIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQS 235
Query: 189 IKGXXXXXXXXXXXMTYPIAFGKDIAAKFAPVSEARTC 226
            +G             YP+  G+DI       S +R C
Sbjct: 236 FQG---VSINTFDNQYYPLVSGRDIPNTGFDKSTSRFC 270
>pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease Sbt3 Length = 649 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query226
3vta_A 621 Cucumisin; subtilisin-like fold, serine protease, 2e-67
3i6s_A 649 Subtilisin-like protease; PA-domain, FN3-domain, h 6e-66
1xf1_A 926 C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St 4e-51
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 1e-23
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 2e-18
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 3e-18
3afg_A 539 Subtilisin-like serine protease; propeptide, therm 9e-18
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 2e-17
3t41_A471 Epidermin leader peptide processing serine protea; 5e-17
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 7e-17
2ixt_A310 36KDA protease; serine protease, sphericase, subti 7e-17
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 9e-17
4aks_A360 PATG, thiazoline oxidase/subtilisin-like protease; 5e-15
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 7e-15
1wmd_A 434 Protease; alpha-beta hydrolase fold, jelly-roll be 2e-14
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 1e-13
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 2e-13
1r6v_A 671 Subtilisin-like serine protease; sandwich domain, 6e-13
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 7e-13
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 4e-11
1y9z_A 441 Alkaline serine protease; subtilisin-like alpha/be 4e-11
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 5e-10
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 7e-10
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 9e-10
3f7m_A279 Alkaline serine protease VER112; verticillium psal 2e-09
2pwa_A279 Proteinase K; structure, alanine boronic acid, hyd 3e-09
2qtw_B 546 Proprotein convertase subtilisin/kexin type 9; cor 5e-09
2p4e_P 692 Proprotein convertase subtilisin/kexin type 9; pro 2e-08
2id4_A 503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 1e-05
1p8j_A 471 Furin precursor; prohormone convertase, SPC1, PACE 2e-04
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Length = 621 Back     alignment and structure
 Score =  217 bits (554), Expect = 2e-67
 Identities = 101/216 (46%), Positives = 135/216 (62%), Gaps = 11/216 (5%)

Query: 11  RKLIGARFYSIPLTSNNHNTTRTTLAGSPRDSVGHGTHTASTAAGAHVANASYFGLARGT 70
           RK+IGAR Y I    +  +         PRD+ GHGTHTASTAAG  V+ A+ +GL  GT
Sbjct: 66  RKIIGARSYHIGRPISPGD------VNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGT 119

Query: 71  ARGGSPSSRIASYKACSEDGCSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPI 130
           ARGG P +RIA+YK C  DGCS + IL A DDAIADGVDIIS+S+G +      Y  D I
Sbjct: 120 ARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDIISLSVGGA--NPRHYFVDAI 177

Query: 131 AIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGASSIDRDFQSTVLLGNGKTIK 190
           AIG+FHA + G++   SAGN GP+  T  + +PW+ +V AS++DR F + V +GNG++ +
Sbjct: 178 AIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQ 237

Query: 191 GSAISLSNLSSSMTYPIAFGKDIAAKFAPVSEARTC 226
           G +I   N   +  YP+  G+DI       S +R C
Sbjct: 238 GVSI---NTFDNQYYPLVSGRDIPNTGFDKSTSRFC 270
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Length = 649 Back     alignment and structure
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Length = 926 Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 Back     alignment and structure
>4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 Back     alignment and structure
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A Length = 279 Back     alignment and structure
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Length = 279 Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 Back     alignment and structure
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503 Back     alignment and structure
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query226
3i6s_A 649 Subtilisin-like protease; PA-domain, FN3-domain, h 100.0
3vta_A 621 Cucumisin; subtilisin-like fold, serine protease, 100.0
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 100.0
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 100.0
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 100.0
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 100.0
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 100.0
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 100.0
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 100.0
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 99.98
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 99.98
3zxy_A282 Subtilisin-like protein; hydrolase; 1.58A {Prochlo 99.98
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 99.97
3afg_A 539 Subtilisin-like serine protease; propeptide, therm 99.97
2ixt_A310 36KDA protease; serine protease, sphericase, subti 99.97
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 99.97
2pwa_A279 Proteinase K; structure, alanine boronic acid, hyd 99.97
3t41_A471 Epidermin leader peptide processing serine protea; 99.97
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 99.97
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 99.97
3f7m_A279 Alkaline serine protease VER112; verticillium psal 99.97
1r6v_A 671 Subtilisin-like serine protease; sandwich domain, 99.97
4h6w_A306 N-terminal cyanobactin protease; hydrolase; 2.45A 99.96
2qtw_B 546 Proprotein convertase subtilisin/kexin type 9; cor 99.96
1y9z_A 441 Alkaline serine protease; subtilisin-like alpha/be 99.96
4h6x_A357 Thiazoline oxidase/subtilisin-like protease; hydro 99.96
2p4e_P 692 Proprotein convertase subtilisin/kexin type 9; pro 99.96
1xf1_A 926 C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St 99.96
1wmd_A 434 Protease; alpha-beta hydrolase fold, jelly-roll be 99.95
1p8j_A 471 Furin precursor; prohormone convertase, SPC1, PACE 99.95
2id4_A 503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 99.94
2oxa_A 600 Extracellular serine protease; kexin, hydrolase; 1 99.94
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 99.93
3hjr_A 600 Extracellular serine protease; kexin, hydrolase; 1 99.91
1t1e_A 552 Kumamolisin; proenzyme, prosubtilase, activation m 99.54
1ga6_A 372 Serine-carboxyl proteinase; serine-carboxyl protei 99.51
3edy_A 544 Tripeptidyl-peptidase 1; protease, TPP1, sedolisin 98.1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Back     alignment and structure
Probab=100.00  E-value=1e-36  Score=289.34  Aligned_cols=195  Identities=42%  Similarity=0.642  Sum_probs=174.1

Q ss_pred             CceEEEEEcCCCcccCCCCCCCCCCCCCCCCCCCChHHHHHHhhccCCCCCcccccCCCcccccCCCCeEEEEeecCCCC
Q 038289           11 RKLIGARFYSIPLTSNNHNTTRTTLAGSPRDSVGHGTHTASTAAGAHVANASYFGLARGTARGGSPSSRIASYKACSEDG   90 (226)
Q Consensus        11 ~k~~g~~~f~~~~~~~~~~~~~~~~~~~~~d~~gHGThvAgiiag~~~~~~~~~g~~~~~~~GvAP~a~l~~~rv~~~~~   90 (226)
                      +||+++|+|.+++....  .+...++.+|.|.+||||||||||+|...++...+|++.+.+.||||+|+|+++|+++..+
T Consensus        71 ~kiig~~~f~~~~~~~~--~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g  148 (649)
T 3i6s_A           71 RKLIGANYFNKGILAND--PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG  148 (649)
T ss_dssp             SSEEEEEECCHHHHHHC--TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE
T ss_pred             cceeeeEeccCcccccc--cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCC
Confidence            59999999987765332  2335566789999999999999999998888777787778889999999999999999877


Q ss_pred             CCHHHHHHHHHHHHHCCCcEEEEcccCCCCCCCCCCccHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCCCeEEEec
Q 038289           91 CSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGPDPSTVVNTAPWIFTVGA  170 (226)
Q Consensus        91 ~~~~~~~~ai~~a~~~g~~VinlS~G~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA  170 (226)
                      +..+++++||+||+++|+||||||||...   .++..+.+..++++|.++|++||+||||+|+...++++.+||+|+|||
T Consensus       149 ~~~~~i~~Ai~~A~~~gvdVIn~SlG~~~---~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgA  225 (649)
T 3i6s_A          149 TFTSDLIAAMDQAVADGVDMISISYGYRF---IPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVAS  225 (649)
T ss_dssp             ECHHHHHHHHHHHHHTTCSEEEECCCCCS---CCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCCEEEeCCccCC---cccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEee
Confidence            89999999999999999999999999875   567788899999999999999999999999998888899999999999


Q ss_pred             eecCCccccceeeCCCeeEecccccccCCCCCCeeeeEEcC
Q 038289          171 SSIDRDFQSTVLLGNGKTIKGSAISLSNLSSSMTYPIAFGK  211 (226)
Q Consensus       171 ~~~~~~~~~~s~~G~~~~i~g~~i~~~~~~~~~~~~~v~~~  211 (226)
                      ++.++.|..+..+|++..+.|.+++..... ...||++|+.
T Consensus       226 st~dr~f~~~~~lgng~~~~g~sl~~~~~~-~~~~plv~~~  265 (649)
T 3i6s_A          226 GHTDRTFAGTLTLGNGLKIRGWSLFPARAF-VRDSPVIYNK  265 (649)
T ss_dssp             EECSCEEEEEEEETTSCEEEEECCCSSCBC-EEEEEEECCT
T ss_pred             eecccceeeEEEeCCCcEEeeeecccCccc-CcceeeEecc
Confidence            999999999999999999999999887643 6789999987
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Back     alignment and structure
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Back     alignment and structure
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Back     alignment and structure
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Back     alignment and structure
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596} Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Back     alignment and structure
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Back     alignment and structure
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Back     alignment and structure
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Back     alignment and structure
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Back     alignment and structure
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} Back     alignment and structure
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A Back     alignment and structure
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A* Back     alignment and structure
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 226
d1v6ca_ 435 c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseud 2e-08
d1gcia_269 c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 4e-04
d1t1ga_ 357 c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bac 5e-04
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Length = 435 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Alkaline serine protease Apa1
species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]

 Score = 51.2 bits (121), Expect = 2e-08
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 11/152 (7%)

Query: 38  SPRDSVGHGTHTASTAAGAHVANASYFGLARGTARGGSPSSRIASYKACSEDGCSGSAIL 97
            P ++  HGTH A T A     N    G+          ++ I   K  +E G   S+ L
Sbjct: 58  QPGNNNAHGTHVAGTIAAIA-NNEGVVGVMPN------QNANIHIVKVFNEAGWGYSSSL 110

Query: 98  QAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGPDPST 157
            A  D   +      +++ +     +    + +          GV++I +AGN G    +
Sbjct: 111 VAAIDTCVNSGGANVVTMSLGGSGSTTTERNALN----THYNNGVLLIAAAGNAGDSSYS 166

Query: 158 VVNTAPWIFTVGASSIDRDFQSTVLLGNGKTI 189
              +   + +V A   + D  +     +   I
Sbjct: 167 YPASYDSVMSVAAVDSNLDHAAFSQYTDQVEI 198
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Length = 269 Back     information, alignment and structure
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} Length = 357 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query226
d1dbia_280 Thermostable serine protease {Bacillus sp., AK.1 [ 99.97
d1thma_279 Thermitase {Thermoactinomyces vulgaris [TaxId: 202 99.97
d1r6va_ 671 Fervidolysin {Fervidobacterium pennivorans [TaxId: 99.96
d1gcia_269 Subtilisin {Bacillus lentus [TaxId: 1467]} 99.96
d1to2e_281 Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' 99.96
d1r0re_274 Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1 99.95
d1v6ca_ 435 Alkaline serine protease Apa1 {Pseudoalteromonas s 99.95
d2pwaa1279 Proteinase K {Fungus (Tritirachium album), strain 99.92
d2ixta1309 Sphericase {Bacillus sphaericus [TaxId: 1421]} 99.88
d1p8ja2334 Furin, N-terminal domain {Mouse (Mus musculus) [Ta 99.8
d1wmda2318 Alkaline serine protease kp-43, N-terminal domain 99.8
d2id4a2339 Kexin, N-terminal domain {Baker's yeast (Saccharom 99.77
d1ga6a_ 369 Serine-carboxyl proteinase, SCP {Pseudomonas sp., 99.56
d1t1ga_ 357 Serine-carboxyl proteinase, SCP {Bacillus novosp. 99.38
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Thermostable serine protease
species: Bacillus sp., AK.1 [TaxId: 1409]

Probab=99.97  E-value=4e-31  Score=225.48  Aligned_cols=190  Identities=23%  Similarity=0.248  Sum_probs=152.8

Q ss_pred             ccccccCCC-CceEEEEEcCCCcccCCCCCCCCCCCCCCCCCCCChHHHHHHhhccCCCCCcccccCCCcccccCCCCeE
Q 038289            2 GITIQYCGC-RKLIGARFYSIPLTSNNHNTTRTTLAGSPRDSVGHGTHTASTAAGAHVANASYFGLARGTARGGSPSSRI   80 (226)
Q Consensus         2 gi~~~~~~~-~k~~g~~~f~~~~~~~~~~~~~~~~~~~~~d~~gHGThvAgiiag~~~~~~~~~g~~~~~~~GvAP~a~l   80 (226)
                      ||..+|+++ .|++..++|....             ..+.|.++|||||+++|++...+.        ..+.||||+|+|
T Consensus        41 Gi~~~h~~l~~~~~~~~~~~~~~-------------~~~~d~~~HGT~vag~i~~~~~~~--------~~~~GvAp~a~l   99 (280)
T d1dbia_          41 GVDYTHPDLDGKVIKGYDFVDND-------------YDPMDLNNHGTHVAGIAAAETNNA--------TGIAGMAPNTRI   99 (280)
T ss_dssp             CCCTTSTTTTTTEEEEEETTTTB-------------SCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSSSCEE
T ss_pred             CcCCCChhhcCCeeecccccCCC-------------CccccccccccceeEeeeccccCC--------CceeEEeccCEE
Confidence            788999987 6888888886554             346788999999999999986543        234799999999


Q ss_pred             EEEeecCCCC-CCHHHHHHHHHHHHHCCCcEEEEcccCCCCCCCCCCccHHHHHHHHHhcCCcEEEEecCCCCCCCCCCC
Q 038289           81 ASYKACSEDG-CSGSAILQAMDDAIADGVDIISISIGMSSLFQSDYLNDPIAIGAFHAEQMGVMVICSAGNDGPDPSTVV  159 (226)
Q Consensus        81 ~~~rv~~~~~-~~~~~~~~ai~~a~~~g~~VinlS~G~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~  159 (226)
                      +.+|+++..+ ....++++||+|+++++++|||+|||....  .    .....+...+.++|+++|+|+||+|......|
T Consensus       100 ~~~~v~~~~~~~~~~~~~~ai~~a~~~g~~iin~S~g~~~~--~----~~~~~a~~~a~~~gilvv~aaGn~g~~~~~~P  173 (280)
T d1dbia_         100 LAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLGCDCH--T----TTLENAVNYAWNKGSVVVAAAGNNGSSTTFEP  173 (280)
T ss_dssp             EEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCSSCCC--C----HHHHHHHHHHHHTTCEEEEECCBC--------
T ss_pred             EEEEEeCCCCCcCHHHHHHHHHHHHHcCCcEeecccccccc--c----hhHHHHHHHHHHCCEEEEEecCccCCCCccCC
Confidence            9999998765 789999999999999999999999998653  2    33445568889999999999999998877888


Q ss_pred             CCCCCeEEEeceecCCccccceeeCCCeeE--ecccccccCCCCCCeeeeEEcCCCCCCCCCc
Q 038289          160 NTAPWIFTVGASSIDRDFQSTVLLGNGKTI--KGSAISLSNLSSSMTYPIAFGKDIAAKFAPV  220 (226)
Q Consensus       160 ~~~p~vitVgA~~~~~~~~~~s~~G~~~~i--~g~~i~~~~~~~~~~~~~v~~~~~~~~~~~~  220 (226)
                      +..+++|+|||++.+++++.||++|..+.+  ||..+.....  ...|..+.|||+++|..++
T Consensus       174 a~~~~vi~Vga~~~~~~~a~~S~~g~~~d~~apg~~i~~~~~--~~~~~~~sGTS~AaP~vaG  234 (280)
T d1dbia_         174 ASYENVIAVGAVDQYDRLASFSNYGTWVDVVAPGVDIVSTIT--GNRYAYMSGTSMASPHVAG  234 (280)
T ss_dssp             -CCTTSEEEEEECTTSCBCTTBCCSTTCCEEEECSSEEEEET--TTEEEEECSHHHHHHHHHH
T ss_pred             CCCCCEEEEeeecCCCCcCCcCCCCCcccccCCccceecccc--CcceeccCCccccchHHHH
Confidence            899999999999999999999999988777  7777766654  5789999999999886654
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Back     information, alignment and structure
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Back     information, alignment and structure
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Back     information, alignment and structure
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Back     information, alignment and structure
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Back     information, alignment and structure
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Back     information, alignment and structure
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Back     information, alignment and structure
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Back     information, alignment and structure
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} Back     information, alignment and structure
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} Back     information, alignment and structure