Citrus Sinensis ID: 038305

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410----
MWKANSALKSLRYVQQSSNKIKVLGCSDISSLIPRPQSNHPPLPVFTTAVRYLRSGRGDSSTNYDIIPPVNWGIRIVPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRAAMEMQAEAERKKRAQILESEGERQAHINIADGKKTSVILESEAAKMDQVNRAQGEAEAIIAKAQATAKGLAMVSQALKENGGLEAASLRVAEQYIQAFGNIAKEGNTLLLPSSASSPANMIAQALTMYKSLVSNASREGSLESSSPGILEGKGDAPTGEPGDDNSPSAETIDVGSIGKPGFSLQNPRKRE
ccccHHHHHHHHHHHccccHHHHccccccccccccccccccccccccccccccccccccccccEEEccEEEEEEEEEccccEEEEEEccccccccccccEEEEcccEEEcccccccEEcccccccccccccccEEEEcEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHEEEEEEEEHHHHEEEcccccEEEEEEcccHHcccccccEEEEEHHHHHHHHEccHHEEccccccEEEEcccEEEEEEEEEEEEEEcHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccc
MWKANSALKSLRYVQQSsnkikvlgcsdissliprpqsnhpplpvFTTAVRYLrsgrgdsstnydiippvnwgirivpeKKAFVIERFGKYVktlpsgihflipFVDRIAYVHSlkeeaipipdqsaitkdnvSILIDGVLYVKivdpklasygvenpIYAVIQLAQTTMRSelgkitldktFEERDTLNEKIVEAINVAARDWGLQCLryeirdispprgVRAAMEMQAEAERKKRAQILESEGerqahiniadgkktSVILESEAAKMDQVNRAQGEAEAIIAKAQATAKGLAMVSQALKENGGLEAASLRVAEQYIQAFGNIAkegntlllpssasspaNMIAQALTMYKSLVSnasregslessspgilegkgdaptgepgddnspsaetidvgsigkpgfslqnprkre
mwkansalkSLRYVQQSSNKIKVLGCSDISSLiprpqsnhpplPVFTTAVRYLRSgrgdsstnydiippvnwgirivPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYVHSLKEEAipipdqsaitkdNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEirdispprgVRAAMEMQAEAERKKRAQILEsegerqahiniadgkktsVILESEAAKMDQVNRAQGEAEAIIAKAQATAKGLAMVSQALKENGGLEAASLRVAEQYIQAFGNIAKEGNTLLLPSSASSPANMIAQALTMYKSLVSNASREGSLESSSPGILEGKGDAPTGEPGDDNSPSaetidvgsigkpgfslqnprkre
MWKANSALKSLRYVQQSSNKIKVLGCSDISSLIPRPQSNHPPLPVFTTAVRYLRSGRGDSSTNYDIIPPVNWGIRIVPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRaamemqaeaeRKKRAQILESEGERQAHINIADGKKTSVILESEAAKMDQVNRaqgeaeaiiakaqatakgLAMVSQALKENGGLEAASLRVAEQYIQAFGNIAKEGNTlllpssasspaNMIAQALTMYKSLVSNASREGSLESSSPGILEGKGDAPTGEPGDDNSPSAETIDVGSIGKPGFSLQNPRKRE
********************IKVLGCSDIS************LPVFTTAVRYLRSGRGDSSTNYDIIPPVNWGIRIVPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDI******************************************************************IIA****TAKGLAMVSQALKENGGLEAASLRVAEQYIQAFGNIAKEGNTLLL********************************************************************************
**********************************************************DSSTNYDIIPPVNWGIRIVPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRAAMEMQA*AERKKRAQILESEGERQAHINIADGKKTSVILES*A**************AIIAKAQATAKGLA*************AASLRVAEQYIQAFGNIAKEGNTLLLPSSASSPANMIA********************************************************************
********KSLRYVQQSSNKIKVLGCSDISSLIPRPQSNHPPLPVFTTAVRYLRSGRGDSSTNYDIIPPVNWGIRIVPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRG****************AQILESEGERQAHINIADGKKTSVILESEAAKMDQVNRAQGEAEAIIAKAQATAKGLAMVSQALKENGGLEAASLRVAEQYIQAFGNIAKEGNTLLLPSSASSPANMIAQALTMYKSLVS************PGILEGKGD*************AETIDVGSIGKPGF*********
MWKANSALKSLRYVQQSSNKIKVLGCSDISSLIPRPQSNHPPLPVFTTAVRYLRSGRGDSSTNYDIIPPVNWGIRIVPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRAAMEMQAEAERKKRAQILESEGERQAHINIADGKKTSVILESEAAKMDQVNRAQGEAEAIIAKAQATAKGLAMVSQALKENGGLEAASLRVAEQYIQAFGNIAKEGNTLLLPSSASSPANMIAQALTMYKSLV**********************************************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MWKANSALKSLRYVQQSSNKIKVLGCSDISSLIPRPQSNHPPLPVFTTAVRYLRSGRGDSSTNYDIIPPVNWGIRIVPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRAAMEMQAEAERKKRAQILESEGERQAHINIADGKKTSVILESEAAKMDQVNRAQGEAEAIIAKAQATAKGLAMVSQALKENGGLEAASLRVAEQYIQAFGNIAKEGNTLLLPSSASSPANMIAQALTMYKSLVSNASREGSLESSSPGILEGKGDAPTGEPGDDNSPSAETIDVGSIGKPGFSLQNPRKRE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query414 2.2.26 [Sep-21-2011]
O60121354 Uncharacterized protein C yes no 0.722 0.844 0.514 3e-86
Q99JB2353 Stomatin-like protein 2 O yes no 0.693 0.813 0.560 2e-84
Q4FZT0353 Stomatin-like protein 2 O yes no 0.693 0.813 0.560 2e-84
Q9UJZ1356 Stomatin-like protein 2 O yes no 0.729 0.848 0.541 4e-84
Q32LL2356 Stomatin-like protein 2 O yes no 0.693 0.806 0.554 9e-84
P72655321 Uncharacterized protein s N/A no 0.702 0.906 0.368 7e-51
P0AA56305 Protein QmcA OS=Shigella yes no 0.657 0.891 0.379 1e-48
P0AA53305 Protein QmcA OS=Escherich N/A no 0.657 0.891 0.379 1e-48
P0AA54305 Protein QmcA OS=Escherich yes no 0.657 0.891 0.379 1e-48
P0AA55305 Protein QmcA OS=Escherich N/A no 0.657 0.891 0.379 1e-48
>sp|O60121|YH77_SCHPO Uncharacterized protein C16G5.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16G5.07c PE=3 SV=1 Back     alignment and function desciption
 Score =  319 bits (817), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 157/305 (51%), Positives = 219/305 (71%), Gaps = 6/305 (1%)

Query: 57  RGDSSTNYDIIPP-----VNWGIRIVPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAY 111
           R D+S+ +   P       N  I+ VP++ A+V+ER G++ + L  G+ FL P +D+IAY
Sbjct: 31  RSDASSLHLFTPTWRDHATNTIIKFVPQQVAYVVERMGRFSRILTPGVAFLAPIIDKIAY 90

Query: 112 VHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMR 171
           +HSLKE A+ IP QSAIT DNVS+ +DGVLY+++ DP  ASYGVE+  YA+ QLAQTTMR
Sbjct: 91  IHSLKERALEIPTQSAITLDNVSLGLDGVLYIQVYDPYKASYGVEDADYAISQLAQTTMR 150

Query: 172 SELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRAAMEMQAE 231
           SE+G++TLD    ER +LN  I +AIN AA  WG++CLR+EIRDI PP  V  AM  Q  
Sbjct: 151 SEIGRLTLDHVLRERQSLNIHITDAINKAAESWGIRCLRHEIRDIRPPESVVMAMHQQVS 210

Query: 232 AERKKRAQILESEGERQAHINIADGKKTSVILESEAAKMDQVNRAQGEAEAIIAKAQATA 291
           AER+KRA+ILESEG+RQA IN+A+G K + IL+SE  K+  +N A  EA+AI  KA ATA
Sbjct: 211 AERQKRAEILESEGKRQAAINVAEGDKQAEILDSEGQKIKTINSALAEAQAIREKASATA 270

Query: 292 KGLAMVSQAL-KENGGLEAASLRVAEQYIQAFGNIAKEGNTLLLPSSASSPANMIAQALT 350
            G+A+++ ++ K+  GLEA SL +A+QYI  FG +AK  N++++P+S S  + M+AQAL+
Sbjct: 271 SGIAVLADSIKKQEHGLEAVSLYIAQQYITNFGKLAKASNSMIVPASTSDVSGMVAQALS 330

Query: 351 MYKSL 355
           ++K +
Sbjct: 331 IFKQV 335

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|Q99JB2|STML2_MOUSE Stomatin-like protein 2 OS=Mus musculus GN=Stoml2 PE=1 SV=1 Back     alignment and function description
>sp|Q4FZT0|STML2_RAT Stomatin-like protein 2 OS=Rattus norvegicus GN=Stoml2 PE=1 SV=1 Back     alignment and function description
>sp|Q9UJZ1|STML2_HUMAN Stomatin-like protein 2 OS=Homo sapiens GN=STOML2 PE=1 SV=1 Back     alignment and function description
>sp|Q32LL2|STML2_BOVIN Stomatin-like protein 2 OS=Bos taurus GN=STOML2 PE=2 SV=1 Back     alignment and function description
>sp|P72655|Y1128_SYNY3 Uncharacterized protein slr1128 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1128 PE=3 SV=1 Back     alignment and function description
>sp|P0AA56|QMCA_SHIFL Protein QmcA OS=Shigella flexneri GN=qmcA PE=3 SV=1 Back     alignment and function description
>sp|P0AA53|QMCA_ECOLI Protein QmcA OS=Escherichia coli (strain K12) GN=qmcA PE=1 SV=1 Back     alignment and function description
>sp|P0AA54|QMCA_ECOL6 Protein QmcA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=qmcA PE=3 SV=1 Back     alignment and function description
>sp|P0AA55|QMCA_ECO57 Protein QmcA OS=Escherichia coli O157:H7 GN=qmcA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query414
449438747424 PREDICTED: uncharacterized protein C16G5 0.975 0.952 0.730 1e-169
363806708404 uncharacterized protein LOC100776545 [Gl 0.956 0.980 0.735 1e-168
358248404404 uncharacterized protein LOC100809006 [Gl 0.958 0.982 0.732 1e-167
225442194420 PREDICTED: stomatin-like protein 2 [Viti 0.927 0.914 0.750 1e-161
18417021411 SPFH/Band 7/PHB domain-containing membra 0.932 0.939 0.700 1e-157
297799222411 band 7 family protein [Arabidopsis lyrat 0.929 0.936 0.708 1e-157
388490782407 unknown [Medicago truncatula] 0.869 0.884 0.771 1e-157
357464289400 Stomatin-like protein [Medicago truncatu 0.869 0.9 0.771 1e-156
4469009 515 putative protein [Arabidopsis thaliana] 0.804 0.646 0.774 1e-155
224118544437 predicted protein [Populus trichocarpa] 0.898 0.851 0.721 1e-150
>gi|449438747|ref|XP_004137149.1| PREDICTED: uncharacterized protein C16G5.07c-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 309/423 (73%), Positives = 356/423 (84%), Gaps = 19/423 (4%)

Query: 4   ANSALKSLRYVQQSSN--KIKVLGCSDISSLI------PRPQS--NHPPLPVFT-TAVRY 52
           A+S L+ L+++  S +   +  L  +  S LI      PRP S  +HP   +F+ T +RY
Sbjct: 9   ASSTLRFLQFIAHSRHLSTLSPLTPTRSSFLISNNPFSPRPSSLISHP---LFSATTIRY 65

Query: 53  LRSGRGDSSTNYDIIPPVNWGIRIVPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYV 112
           LR+GR D + +Y+I PP+NWGIRIVPEKKA+VIERFGKYVKTLPSGIHF+IPFVDRIAYV
Sbjct: 66  LRTGR-DPNISYEITPPINWGIRIVPEKKAYVIERFGKYVKTLPSGIHFMIPFVDRIAYV 124

Query: 113 HSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMRS 172
           HSLKEEAIPIPDQSAITKDNVSILIDG+LYVKIVDPKLASYGVENPIYAVIQLAQTTMRS
Sbjct: 125 HSLKEEAIPIPDQSAITKDNVSILIDGMLYVKIVDPKLASYGVENPIYAVIQLAQTTMRS 184

Query: 173 ELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRAAMEMQAEA 232
           ELGKITLDKTFEERDTLNEKIVE+INVAARDWGLQCLRYEIRDISPPRGVRAAMEMQAEA
Sbjct: 185 ELGKITLDKTFEERDTLNEKIVESINVAARDWGLQCLRYEIRDISPPRGVRAAMEMQAEA 244

Query: 233 ERKKRAQILESEGERQAHINIADGKKTSVILESEAAKMDQVNRAQGEAEAIIAKAQATAK 292
           ERKKRAQ+LESEGERQA+INIADG+K +VILESEAAKMDQVNRAQGEAEAI+ KAQATAK
Sbjct: 245 ERKKRAQVLESEGERQANINIADGRKNAVILESEAAKMDQVNRAQGEAEAILVKAQATAK 304

Query: 293 GLAMVSQALKENGGLEAASLRVAEQYIQAFGNIAKEGNTLLLPSSASSPANMIAQALTMY 352
           GL +VSQALK++GG+EAASLR+AEQYIQAF NIAKEG T+LLPSSA++PANM+AQALT+Y
Sbjct: 305 GLTLVSQALKDSGGVEAASLRIAEQYIQAFSNIAKEGTTMLLPSSAANPANMMAQALTIY 364

Query: 353 KSLVSNASREGSLESSSPGILEG-KGDAPTGEPGDDNSPSAETIDVGSIGKPGFSLQNPR 411
           K+LV N S   S+E+ + G+ EG K      E G D++ +   +D     +PGFSLQ P+
Sbjct: 365 KNLVGNVS---SVEAGTSGLNEGMKESNLAAEIGGDSNQTVRVMDEVEHDRPGFSLQTPK 421

Query: 412 KRE 414
             E
Sbjct: 422 SAE 424

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|363806708|ref|NP_001242268.1| uncharacterized protein LOC100776545 [Glycine max] gi|255634995|gb|ACU17856.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|358248404|ref|NP_001239876.1| uncharacterized protein LOC100809006 [Glycine max] gi|255647468|gb|ACU24198.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|225442194|ref|XP_002276800.1| PREDICTED: stomatin-like protein 2 [Vitis vinifera] gi|297743035|emb|CBI35902.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|18417021|ref|NP_567778.1| SPFH/Band 7/PHB domain-containing membrane-associated protein [Arabidopsis thaliana] gi|14334466|gb|AAK59431.1| unknown protein [Arabidopsis thaliana] gi|16323442|gb|AAL15215.1| unknown protein [Arabidopsis thaliana] gi|21554181|gb|AAM63260.1| stomatin-like protein [Arabidopsis thaliana] gi|110740541|dbj|BAE98376.1| hypothetical protein [Arabidopsis thaliana] gi|332659960|gb|AEE85360.1| SPFH/Band 7/PHB domain-containing membrane-associated protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297799222|ref|XP_002867495.1| band 7 family protein [Arabidopsis lyrata subsp. lyrata] gi|297313331|gb|EFH43754.1| band 7 family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|388490782|gb|AFK33457.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357464289|ref|XP_003602426.1| Stomatin-like protein [Medicago truncatula] gi|355491474|gb|AES72677.1| Stomatin-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|4469009|emb|CAB38270.1| putative protein [Arabidopsis thaliana] gi|7269612|emb|CAB81408.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224118544|ref|XP_002317847.1| predicted protein [Populus trichocarpa] gi|222858520|gb|EEE96067.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query414
TAIR|locus:505006523411 AT4G27585 "AT4G27585" [Arabido 0.937 0.944 0.642 1.3e-122
TAIR|locus:2166577401 AT5G54100 [Arabidopsis thalian 0.753 0.778 0.730 1.1e-110
ZFIN|ZDB-GENE-040426-1139355 stoml2 "stomatin (EPB72)-like 0.739 0.861 0.464 1.8e-71
UNIPROTKB|E2RKS8356 PIGO "Uncharacterized protein" 0.758 0.882 0.466 8.9e-70
UNIPROTKB|Q9UJZ1356 STOML2 "Stomatin-like protein 0.763 0.887 0.463 1.8e-69
UNIPROTKB|F1SIH5356 STOML2 "Uncharacterized protei 0.794 0.924 0.449 1e-68
MGI|MGI:1913842353 Stoml2 "stomatin (Epb7.2)-like 0.722 0.847 0.48 1.3e-68
RGD|1308285353 Stoml2 "stomatin (Epb7.2)-like 0.722 0.847 0.48 1.3e-68
UNIPROTKB|A5PJA6356 STOML2 "Stomatin (EPB72)-like 0.693 0.806 0.484 3.5e-68
UNIPROTKB|Q32LL2356 STOML2 "Stomatin-like protein 0.693 0.806 0.484 3.5e-68
TAIR|locus:505006523 AT4G27585 "AT4G27585" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1189 (423.6 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
 Identities = 257/400 (64%), Positives = 290/400 (72%)

Query:    24 LGCSDISSLIPRPQS--NHPPLPVFTTAVRYLR--SGRGDSSTNYDIIPPVNWGIRIVPE 79
             +G S + S+    QS    PP P+F+ A   +R  +  G  S ++ + PP NWGIRIVPE
Sbjct:    10 VGYSALRSVSYLRQSAVTSPP-PIFSAAASTVRQFTSAGYPSNSFQLTPPTNWGIRIVPE 68

Query:    80 KKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDG 139
             +KAFVIERFGKY  TLPSGIHFLIPFVDRIAYVHSLKEEAIPIP+Q+AITKDNVSI IDG
Sbjct:    69 RKAFVIERFGKYATTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPNQTAITKDNVSIHIDG 128

Query:   140 VLYVKIVDPKLASYGVENPIYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINV 199
             VLYVKIVDPKLASYGVE+PIYAV+QLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINV
Sbjct:   129 VLYVKIVDPKLASYGVESPIYAVVQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINV 188

Query:   200 AARDWGLQCLRYEIRDISPPRGVRXXXXXXXXXXRKKRAQILESEGERQAHINIADGKKT 259
             AA+DWGLQCLRYEIRDI PP GVR          RKKRAQILESEGERQ+HINIADGKK+
Sbjct:   189 AAKDWGLQCLRYEIRDIMPPHGVRAAMEMQAEAERKKRAQILESEGERQSHINIADGKKS 248

Query:   260 SVILESEAAKMDQVNRXXXXXXXXXXXXXXXXXXLAMVSQALKENGGLEAASLRVAEQYI 319
             SVIL SEAAKMDQVNR                  L ++SQ+LKE GG+EAASLRVAEQYI
Sbjct:   249 SVILASEAAKMDQVNRAQGEAEAILARAQATAKGLVLLSQSLKETGGVEAASLRVAEQYI 308

Query:   320 QAFGNIAKEGNTXXXXXXXXXXXNMIAQALTMYKSLVSNA-SREG----SLESSSPGILE 374
              AFGNIAKEG             +MIAQALTMYKSLV N  S++     +L+ +    LE
Sbjct:   309 TAFGNIAKEGTIMLLPSGASNPASMIAQALTMYKSLVINGPSKDHQETQALDETDLEELE 368

Query:   375 GKGDAPTGEPGDDNSPSA--ETIDVGSIGKPGFSLQNPRK 412
               G+    E  ++ S S   +T   G  G+P FSLQN  K
Sbjct:   369 DMGEKHISEGSNNRSGSISFDTEKPGHTGEPRFSLQNRNK 408
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA;IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0008270 "zinc ion binding" evidence=IDA
TAIR|locus:2166577 AT5G54100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1139 stoml2 "stomatin (EPB72)-like 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2RKS8 PIGO "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UJZ1 STOML2 "Stomatin-like protein 2, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SIH5 STOML2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1913842 Stoml2 "stomatin (Epb7.2)-like 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1308285 Stoml2 "stomatin (Epb7.2)-like 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A5PJA6 STOML2 "Stomatin (EPB72)-like 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q32LL2 STOML2 "Stomatin-like protein 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q4FZT0STML2_RATNo assigned EC number0.56090.69320.8130yesno
Q99JB2STML2_MOUSENo assigned EC number0.56090.69320.8130yesno
O60121YH77_SCHPONo assigned EC number0.51470.72220.8446yesno
Q9UJZ1STML2_HUMANNo assigned EC number0.54120.72940.8483yesno
Q32LL2STML2_BOVINNo assigned EC number0.55400.69320.8061yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query414
cd03403215 cd03403, Band_7_stomatin_like, Band_7_stomatin_lik 2e-99
COG0330291 COG0330, HflC, Membrane protease subunits, stomati 3e-57
smart00244160 smart00244, PHB, prohibitin homologues 2e-42
cd02106121 cd02106, Band_7, The band 7 domain of flotillin (r 2e-33
pfam01145177 pfam01145, Band_7, SPFH domain / Band 7 family 1e-29
cd03407262 cd03407, Band_7_4, A subgroup of the band 7 domain 5e-23
cd03404266 cd03404, Band_7_HflK, Band_7_HflK: The band 7 doma 4e-21
TIGR01933261 TIGR01933, hflK, HflK protein 4e-21
cd03405242 cd03405, Band_7_HflC, Band_7_HflC: The band 7 doma 5e-21
TIGR01932317 TIGR01932, hflC, HflC protein 4e-07
PRK10930419 PRK10930, PRK10930, FtsH protease regulator HflK; 5e-05
cd03399128 cd03399, Band_7_flotillin, Band_7_flotillin: a sub 1e-04
>gnl|CDD|239497 cd03403, Band_7_stomatin_like, Band_7_stomatin_like: A subgroup of the band 7 domain of flotillin (reggie) like proteins similar to stomatin and podicin (two lipid raft-associated integral membrane proteins) Back     alignment and domain information 
 Score =  295 bits (757), Expect = 2e-99
 Identities = 96/211 (45%), Positives = 144/211 (68%), Gaps = 2/211 (0%)

Query: 77  VPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSIL 136
           VP+ +  V+ER GKY +TL  G+HF+IPF+DRIAY   L+E+ + +P Q  ITKDNV++ 
Sbjct: 1   VPQYERGVVERLGKYHRTLGPGLHFIIPFIDRIAYKVDLREQVLDVPPQEVITKDNVTVR 60

Query: 137 IDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVEA 196
           +D VLY ++VDP  A YGVE+  YA+ QLAQTT+RS +GK+ LD+   ER+ +N ++VE 
Sbjct: 61  VDAVLYYRVVDPVKAVYGVEDYRYAISQLAQTTLRSVIGKMELDELLSEREEINAELVEI 120

Query: 197 INVAARDWGLQCLRYEIRDISPPRGVRAAMEMQAEAERKKRAQILESEGERQAHINIADG 256
           ++ A   WG++  R EI+DI  P+ ++ AM  QAEAER+KRA+I+E+EGERQA I +A+ 
Sbjct: 121 LDEATDPWGVKVERVEIKDIILPQEIQEAMAKQAEAEREKRAKIIEAEGERQAAILLAEA 180

Query: 257 KKTSVI--LESEAAKMDQVNRAQGEAEAIIA 285
            K + I     +  +++ +     EA + + 
Sbjct: 181 AKQAAINPAALQLRELETLEEIAKEAASTVV 211

Individual proteins of this band 7 domain family may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Stomatin is widely expressed and, highly expressed in red blood cells. It localizes predominantly to the plasma membrane and to intracellular vesicles of the endocytic pathway, where it is present in higher order homo-oligomeric complexes (of between 9 and 12 monomers). Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and, is implicated in trafficking of Glut1 glucose transporters. Prohibitin is a mitochondrial inner-membrane protein hypothesized to act as a chaperone for the stabilization of mitochondrial proteins. Podicin localizes to the plasma membrane of podocyte foot processes and, is found in higher order oligomers. Podocin plays a role in regulating glomerular permeability. Mutations in the podicin gene give rise to autosomal recessive steroid resistant nephritic syndrome. This group also contains proteins similar to three Caenorhabditis elegans proteins: UNC-1, UNC-24 and, MEC-2. Mutations in the unc-1 and unc-24 genes result in abnormal motion and altered patterns of sensitivity to volatile anesthetics. MEC-2 and UNC-24 proteins interact with MEC-4 which is part of the degenerin channel complex required for response to gentle body touch. Length = 215
>gnl|CDD|223407 COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|214581 smart00244, PHB, prohibitin homologues Back     alignment and domain information
>gnl|CDD|239024 cd02106, Band_7, The band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>gnl|CDD|216327 pfam01145, Band_7, SPFH domain / Band 7 family Back     alignment and domain information
>gnl|CDD|239501 cd03407, Band_7_4, A subgroup of the band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>gnl|CDD|239498 cd03404, Band_7_HflK, Band_7_HflK: The band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>gnl|CDD|130988 TIGR01933, hflK, HflK protein Back     alignment and domain information
>gnl|CDD|239499 cd03405, Band_7_HflC, Band_7_HflC: The band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>gnl|CDD|233644 TIGR01932, hflC, HflC protein Back     alignment and domain information
>gnl|CDD|236799 PRK10930, PRK10930, FtsH protease regulator HflK; Provisional Back     alignment and domain information
>gnl|CDD|239493 cd03399, Band_7_flotillin, Band_7_flotillin: a subgroup of the band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 414
KOG2620301 consensus Prohibitins and stomatins of the PID sup 100.0
PRK10930419 FtsH protease regulator HflK; Provisional 100.0
cd03407262 Band_7_4 A subgroup of the band 7 domain of flotil 100.0
PRK11029334 FtsH protease regulator HflC; Provisional 100.0
TIGR01933261 hflK HflK protein. HflK and HflC are paralogs enco 100.0
TIGR01932317 hflC HflC protein. HflK and HflC are paralogs enco 100.0
cd03404266 Band_7_HflK Band_7_HflK: The band 7 domain of flot 100.0
cd03405242 Band_7_HflC Band_7_HflC: The band 7 domain of flot 100.0
COG0330291 HflC Membrane protease subunits, stomatin/prohibit 100.0
cd03406280 Band_7_3 A subgroup of the band 7 domain of flotil 100.0
cd03403215 Band_7_stomatin_like Band_7_stomatin_like: A subgr 100.0
cd03401196 Band_7_prohibitin Band_7_prohibitin. A subgroup of 100.0
cd03402219 Band_7_2 A subgroup of the band 7 domain of flotil 100.0
KOG2962322 consensus Prohibitin-related membrane protease sub 99.97
KOG2621288 consensus Prohibitins and stomatins of the PID sup 99.97
smart00244160 PHB prohibitin homologues. prohibitin homologues 99.96
PF01145179 Band_7: SPFH domain / Band 7 family; InterPro: IPR 99.96
KOG3090290 consensus Prohibitin-like protein [Posttranslation 99.94
KOG2668428 consensus Flotillins [Intracellular trafficking, s 99.9
KOG3083271 consensus Prohibitin [Posttranslational modificati 99.9
COG2268 548 Uncharacterized protein conserved in bacteria [Fun 99.86
cd03408207 Band_7_5 A subgroup of the band 7 domain of flotil 99.84
cd03399128 Band_7_flotillin Band_7_flotillin: a subgroup of t 99.73
cd03400124 Band_7_1 A subgroup of the band 7 domain of flotil 99.68
cd02106121 Band_7 The band 7 domain of flotillin (reggie) lik 99.59
PF13421211 Band_7_1: SPFH domain-Band 7 family 99.31
COG4260345 Membrane protease subunit, stomatin/prohibitin fam 98.89
PTZ00491850 major vault protein; Provisional 98.86
cd03405242 Band_7_HflC Band_7_HflC: The band 7 domain of flot 97.62
cd03407262 Band_7_4 A subgroup of the band 7 domain of flotil 97.5
cd03404266 Band_7_HflK Band_7_HflK: The band 7 domain of flot 97.41
TIGR01933261 hflK HflK protein. HflK and HflC are paralogs enco 97.4
PF12127316 YdfA_immunity: SigmaW regulon antibacterial; Inter 97.29
PRK11029334 FtsH protease regulator HflC; Provisional 97.29
KOG2620301 consensus Prohibitins and stomatins of the PID sup 97.23
TIGR01932317 hflC HflC protein. HflK and HflC are paralogs enco 97.18
PRK13665316 hypothetical protein; Provisional 96.76
PRK10930419 FtsH protease regulator HflK; Provisional 96.01
PF11978118 MVP_shoulder: Shoulder domain; InterPro: IPR021870 94.74
cd03403215 Band_7_stomatin_like Band_7_stomatin_like: A subgr 94.28
COG2811108 NtpF Archaeal/vacuolar-type H+-ATPase subunit H [E 93.6
PRK01558198 V-type ATP synthase subunit E; Provisional 89.6
PRK01558198 V-type ATP synthase subunit E; Provisional 89.28
TIGR03321246 alt_F1F0_F0_B alternate F1F0 ATPase, F0 subunit B. 89.23
COG0330291 HflC Membrane protease subunits, stomatin/prohibit 89.18
PRK01005207 V-type ATP synthase subunit E; Provisional 89.11
CHL00118156 atpG ATP synthase CF0 B' subunit; Validated 89.02
PRK06231205 F0F1 ATP synthase subunit B; Validated 88.29
PRK01005207 V-type ATP synthase subunit E; Provisional 88.2
PRK14475167 F0F1 ATP synthase subunit B; Provisional 88.04
PRK13453173 F0F1 ATP synthase subunit B; Provisional 87.77
PRK14474250 F0F1 ATP synthase subunit B; Provisional 87.71
PRK08404103 V-type ATP synthase subunit H; Validated 87.61
TIGR01147113 V_ATP_synt_G vacuolar ATP synthase, subunit G. Thi 87.38
COG4864328 Uncharacterized protein conserved in bacteria [Fun 87.3
PRK14472175 F0F1 ATP synthase subunit B; Provisional 87.21
PRK13460173 F0F1 ATP synthase subunit B; Provisional 86.97
PF0374899 FliL: Flagellar basal body-associated protein FliL 86.95
PRK13461159 F0F1 ATP synthase subunit B; Provisional 86.95
PRK09174204 F0F1 ATP synthase subunit B'; Validated 86.67
PRK08404103 V-type ATP synthase subunit H; Validated 86.32
PRK06568154 F0F1 ATP synthase subunit B; Validated 86.31
PRK08476141 F0F1 ATP synthase subunit B'; Validated 86.09
PRK08475167 F0F1 ATP synthase subunit B; Validated 85.95
PRK07353140 F0F1 ATP synthase subunit B'; Validated 85.13
PRK14473164 F0F1 ATP synthase subunit B; Provisional 84.96
CHL00019184 atpF ATP synthase CF0 B subunit 84.78
TIGR01147113 V_ATP_synt_G vacuolar ATP synthase, subunit G. Thi 84.63
KOG2668428 consensus Flotillins [Intracellular trafficking, s 84.31
PRK07352174 F0F1 ATP synthase subunit B; Validated 84.29
COG1580159 FliL Flagellar basal body-associated protein [Cell 84.25
PRK05759156 F0F1 ATP synthase subunit B; Validated 84.01
COG2268548 Uncharacterized protein conserved in bacteria [Fun 83.6
PRK13428 445 F0F1 ATP synthase subunit delta; Provisional 83.38
PRK13454181 F0F1 ATP synthase subunit B'; Provisional 82.94
PRK13455184 F0F1 ATP synthase subunit B; Provisional 82.36
TIGR0292685 AhaH ATP synthase archaeal, H subunit. he A1/A0 AT 81.8
PRK09098233 type III secretion system protein HrpB; Validated 81.13
PRK07718142 fliL flagellar basal body-associated protein FliL; 81.02
PRK06568154 F0F1 ATP synthase subunit B; Validated 80.9
>KOG2620 consensus Prohibitins and stomatins of the PID superfamily [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=7.5e-51  Score=372.03  Aligned_cols=291  Identities=60%  Similarity=0.853  Sum_probs=282.0

Q ss_pred             cceeEEEecCCeEEEEEeCcEEeEEeCCCceeecCccceEEEeeccceEeeeCCCceeecCCCceEEEEEEEEEEecCcc
Q 038305           70 VNWGIRIVPEKKAFVIERFGKYVKTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPK  149 (414)
Q Consensus        70 ~~~~~~~V~~g~~gVv~r~Gk~~~~l~pG~hf~~P~i~~v~~v~~~r~q~~~~~~~~v~TkD~~~v~vd~~v~yrI~dp~  149 (414)
                      ..+.+.+||+.+++|+.|||++.++++||+||+.|+++++.++++++...+..+.++..|+||+.|.+|++++|||.||.
T Consensus         5 ~n~vi~~VpQ~~a~VvER~GkF~~iLePG~~fl~p~~d~i~~v~~lkeia~~~~~q~aiTkDNV~v~idgvly~rv~dp~   84 (301)
T KOG2620|consen    5 TNTVIRFVPQQEAAVVERFGKFHRILEPGLHFLPPVIDKIAYVHSLKEIAILDPKQEAITKDNVFVQIDGVLYYRVVDPY   84 (301)
T ss_pred             ceeeEEeechhHhHHHHHhhhhhhhcCCcceechhhhhhHHHHHHHHHHhhcccccceeecccEEEEEEEEEEEEEeccc
Confidence            34555679999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c--cccccCCHHHHHHHHHHHHHHHHHhccchhhhHhhHHHHHHHHHHHHHHHHhhcCcEEeEEEEeecCCcHHHHHHHH
Q 038305          150 L--ASYGVENPIYAVIQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRAAME  227 (414)
Q Consensus       150 ~--~~~~~~~~~~~i~~~~~~~lR~vi~~~tl~ei~~~R~~l~~~i~~~l~~~l~~~GI~I~~V~I~di~~p~~i~~ai~  227 (414)
                      +  +.|+++|++..|..++++++|+.+++++||.+|+.|+.|+..|.++++..+..||++|.+..|+||.||+.+.++|+
T Consensus        85 ~~dAsYgvenp~~aI~qlaqttmRsevgkltLD~vFeer~~ln~sI~eainkA~~~wG~~clr~eIrDI~pp~~V~~AM~  164 (301)
T KOG2620|consen   85 ADDASYGVENPEYAIQQLAQTTMRSEVGKLTLDKVFEERNSLNKSIVEAINKAMEAWGYECLRYEIRDIEPPPSVKRAMN  164 (301)
T ss_pred             ccccccccCCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhcCCCHHHHHHHH
Confidence            8  99999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Q 038305          228 MQAEAERKKRAQILESEGERQAHINIADGKKTSVILESEAAKMDQVNRAQGEAEAIIAKAQATAKGLAMVSQALKENGGL  307 (414)
Q Consensus       228 ~~~~Aeq~~~a~i~eAe~e~~~~i~~Ae~~a~~~~~~AeA~ae~~~~~AegeA~a~~~~a~AeA~a~~~~~eal~~~~~~  307 (414)
                      ++.+|+|.+++.+.++|++++.+|++||++++..+...++.+..+++.|.|+|++++..+++.+.++..+...|...++.
T Consensus       165 ~q~~AeR~krAailesEger~~~InrAEGek~s~iL~seg~~~qr~n~a~Gea~ail~~A~a~a~~~a~~~~~l~~~~g~  244 (301)
T KOG2620|consen  165 MQNEAERMKRAAILESEGERIAQINRAEGEKESKILASEGIARQRQNIADGEAEAILAFADAVAGTSAKLVMDLKQEGGV  244 (301)
T ss_pred             HHHHHHHHHHHHHhhhhhhhHHhhhhhcchhhhHHhhhHHHHHHHHHHHhhHHHHHHHHhhcccchHHHHHHHHHHhcch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHhhhcCCEEEeCCCCCChHHHHHHHHHHHHHhhcCCC
Q 038305          308 EAASLRVAEQYIQAFGNIAKEGNTLLLPSSASSPANMIAQALTMYKSLVSNAS  360 (414)
Q Consensus       308 ~a~~~~~~~~~~e~l~~ia~~~~~vvl~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (414)
                      ++..+..+++|+.++.++++.+|++++|++.|++.+|++|.+++|++.+....
T Consensus       245 ~aasl~~a~qyIgaf~~lak~sntv~lP~~pg~v~~mvaQa~~~~~~~s~~~~  297 (301)
T KOG2620|consen  245 EAASLFDAEQYIGAFGKLAKKSNTVFLPHGPGDVRDMVAQALNGYKQLSNATQ  297 (301)
T ss_pred             hhHHHHHHHHHHHhhhhhcccCceEEecCCCCcHHHHHHHHHHHHHhhhccCC
Confidence            99999999999999999999999999999999999999999999999876553

>PRK10930 FtsH protease regulator HflK; Provisional Back     alignment and domain information
>cd03407 Band_7_4 A subgroup of the band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>PRK11029 FtsH protease regulator HflC; Provisional Back     alignment and domain information
>TIGR01933 hflK HflK protein Back     alignment and domain information
>TIGR01932 hflC HflC protein Back     alignment and domain information
>cd03404 Band_7_HflK Band_7_HflK: The band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>cd03405 Band_7_HflC Band_7_HflC: The band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>COG0330 HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03406 Band_7_3 A subgroup of the band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>cd03403 Band_7_stomatin_like Band_7_stomatin_like: A subgroup of the band 7 domain of flotillin (reggie) like proteins similar to stomatin and podicin (two lipid raft-associated integral membrane proteins) Back     alignment and domain information
>cd03401 Band_7_prohibitin Band_7_prohibitin Back     alignment and domain information
>cd03402 Band_7_2 A subgroup of the band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>KOG2962 consensus Prohibitin-related membrane protease subunits [General function prediction only] Back     alignment and domain information
>KOG2621 consensus Prohibitins and stomatins of the PID superfamily [Energy production and conversion] Back     alignment and domain information
>smart00244 PHB prohibitin homologues Back     alignment and domain information
>PF01145 Band_7: SPFH domain / Band 7 family; InterPro: IPR001107 Band 7 protein is an integral membrane protein which is thought to regulate cation conductance Back     alignment and domain information
>KOG3090 consensus Prohibitin-like protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2668 consensus Flotillins [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton] Back     alignment and domain information
>KOG3083 consensus Prohibitin [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2268 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd03408 Band_7_5 A subgroup of the band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>cd03399 Band_7_flotillin Band_7_flotillin: a subgroup of the band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>cd03400 Band_7_1 A subgroup of the band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>cd02106 Band_7 The band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>PF13421 Band_7_1: SPFH domain-Band 7 family Back     alignment and domain information
>COG4260 Membrane protease subunit, stomatin/prohibitin family [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00491 major vault protein; Provisional Back     alignment and domain information
>cd03405 Band_7_HflC Band_7_HflC: The band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>cd03407 Band_7_4 A subgroup of the band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>cd03404 Band_7_HflK Band_7_HflK: The band 7 domain of flotillin (reggie) like proteins Back     alignment and domain information
>TIGR01933 hflK HflK protein Back     alignment and domain information
>PF12127 YdfA_immunity: SigmaW regulon antibacterial; InterPro: IPR022853 This entry represents the uncharacterised protein family UPF0365 Back     alignment and domain information
>PRK11029 FtsH protease regulator HflC; Provisional Back     alignment and domain information
>KOG2620 consensus Prohibitins and stomatins of the PID superfamily [Energy production and conversion] Back     alignment and domain information
>TIGR01932 hflC HflC protein Back     alignment and domain information
>PRK13665 hypothetical protein; Provisional Back     alignment and domain information
>PRK10930 FtsH protease regulator HflK; Provisional Back     alignment and domain information
>PF11978 MVP_shoulder: Shoulder domain; InterPro: IPR021870 This domain is found in the Major Vault Protein and has been called the shoulder domain [] Back     alignment and domain information
>cd03403 Band_7_stomatin_like Band_7_stomatin_like: A subgroup of the band 7 domain of flotillin (reggie) like proteins similar to stomatin and podicin (two lipid raft-associated integral membrane proteins) Back     alignment and domain information
>COG2811 NtpF Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion] Back     alignment and domain information
>PRK01558 V-type ATP synthase subunit E; Provisional Back     alignment and domain information
>PRK01558 V-type ATP synthase subunit E; Provisional Back     alignment and domain information
>TIGR03321 alt_F1F0_F0_B alternate F1F0 ATPase, F0 subunit B Back     alignment and domain information
>COG0330 HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01005 V-type ATP synthase subunit E; Provisional Back     alignment and domain information
>CHL00118 atpG ATP synthase CF0 B' subunit; Validated Back     alignment and domain information
>PRK06231 F0F1 ATP synthase subunit B; Validated Back     alignment and domain information
>PRK01005 V-type ATP synthase subunit E; Provisional Back     alignment and domain information
>PRK14475 F0F1 ATP synthase subunit B; Provisional Back     alignment and domain information
>PRK13453 F0F1 ATP synthase subunit B; Provisional Back     alignment and domain information
>PRK14474 F0F1 ATP synthase subunit B; Provisional Back     alignment and domain information
>PRK08404 V-type ATP synthase subunit H; Validated Back     alignment and domain information
>TIGR01147 V_ATP_synt_G vacuolar ATP synthase, subunit G Back     alignment and domain information
>COG4864 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK14472 F0F1 ATP synthase subunit B; Provisional Back     alignment and domain information
>PRK13460 F0F1 ATP synthase subunit B; Provisional Back     alignment and domain information
>PF03748 FliL: Flagellar basal body-associated protein FliL; InterPro: IPR005503 This FliL protein controls the rotational direction of the flagella during chemotaxis [] Back     alignment and domain information
>PRK13461 F0F1 ATP synthase subunit B; Provisional Back     alignment and domain information
>PRK09174 F0F1 ATP synthase subunit B'; Validated Back     alignment and domain information
>PRK08404 V-type ATP synthase subunit H; Validated Back     alignment and domain information
>PRK06568 F0F1 ATP synthase subunit B; Validated Back     alignment and domain information
>PRK08476 F0F1 ATP synthase subunit B'; Validated Back     alignment and domain information
>PRK08475 F0F1 ATP synthase subunit B; Validated Back     alignment and domain information
>PRK07353 F0F1 ATP synthase subunit B'; Validated Back     alignment and domain information
>PRK14473 F0F1 ATP synthase subunit B; Provisional Back     alignment and domain information
>CHL00019 atpF ATP synthase CF0 B subunit Back     alignment and domain information
>TIGR01147 V_ATP_synt_G vacuolar ATP synthase, subunit G Back     alignment and domain information
>KOG2668 consensus Flotillins [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton] Back     alignment and domain information
>PRK07352 F0F1 ATP synthase subunit B; Validated Back     alignment and domain information
>COG1580 FliL Flagellar basal body-associated protein [Cell motility and secretion] Back     alignment and domain information
>PRK05759 F0F1 ATP synthase subunit B; Validated Back     alignment and domain information
>COG2268 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK13428 F0F1 ATP synthase subunit delta; Provisional Back     alignment and domain information
>PRK13454 F0F1 ATP synthase subunit B'; Provisional Back     alignment and domain information
>PRK13455 F0F1 ATP synthase subunit B; Provisional Back     alignment and domain information
>TIGR02926 AhaH ATP synthase archaeal, H subunit Back     alignment and domain information
>PRK09098 type III secretion system protein HrpB; Validated Back     alignment and domain information
>PRK07718 fliL flagellar basal body-associated protein FliL; Reviewed Back     alignment and domain information
>PRK06568 F0F1 ATP synthase subunit B; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query414
3bk6_A188 Crystal Structure Of A Core Domain Of Stomatin From 5e-19
2rpb_A113 The Solution Structure Of Membrane Protein Length = 6e-15
4fvg_A133 Spfh Domain Of Mouse Stomatin (Crystal Form 3) Leng 4e-13
4fvj_A133 Spfh Domain Of The Mouse Stomatin (Crystal Form 2) 1e-12
4fvf_A128 Spfh Domain Of Mouse Stomatin (Crystal Form 1) Leng 1e-12
>pdb|3BK6|A Chain A, Crystal Structure Of A Core Domain Of Stomatin From Pyrococcus Horikoshii Length = 188 Back     alignment and structure 
Iteration: 1

 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 83/140 (59%)
Query: 110 AYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTT 169
           A +  L+ + + +P Q  ITKDNV + ++ V+Y ++VDP  A   V+N I A  Q++QTT
Sbjct: 6   AVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTT 65
Query: 170 MRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRXXXXXX 229
           +RS +G+  LD+   ERD LN ++   I+ A   WG++    EI+D+  P G++      
Sbjct: 66  LRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQ 125
Query: 230 XXXXRKKRAQILESEGERQA 249
               R++RA+I  +E ERQA
Sbjct: 126 AEAERERRARITLAEAERQA 145
>pdb|2RPB|A Chain A, The Solution Structure Of Membrane Protein Length = 113 Back     alignment and structure
>pdb|4FVG|A Chain A, Spfh Domain Of Mouse Stomatin (Crystal Form 3) Length = 133 Back     alignment and structure
>pdb|4FVJ|A Chain A, Spfh Domain Of The Mouse Stomatin (Crystal Form 2) Length = 133 Back     alignment and structure
>pdb|4FVF|A Chain A, Spfh Domain Of Mouse Stomatin (Crystal Form 1) Length = 128 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query414
3bk6_A188 PH stomatin; archaea, trimer, coiled- coil, flotil 7e-56
2rpb_A113 Hypothetical membrane protein; SPFH domain; NMR {P 2e-49
4fvg_A133 Stomatin; mixed alpha-beta fold, membrane scaffold 4e-49
1win_A143 Flotillin 2; BAND 7 domain, structural genomics, r 2e-28
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
>3bk6_A PH stomatin; archaea, trimer, coiled- coil, flotillin, SPFH, membrane fusion, trafficking, transmembrane, membrane protein; 3.20A {Pyrococcus horikoshii} Length = 188 Back     alignment and structure
 Score =  181 bits (462), Expect = 7e-56
 Identities = 62/163 (38%), Positives = 98/163 (60%), Gaps = 3/163 (1%)

Query: 106 VDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQL 165
            ++   V  L+ + + +P Q  ITKDNV + ++ V+Y ++VDP  A   V+N I A  Q+
Sbjct: 3   FEKAVIV-DLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQI 61

Query: 166 AQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRAA 225
           +QTT+RS +G+  LD+   ERD LN ++   I+ A   WG++    EI+D+  P G++ A
Sbjct: 62  SQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKA 121

Query: 226 MEMQAEAERKKRAQILESEGERQAHINIADGKKTSVILESEAA 268
           M  QAEAER++RA+I  +E ERQA   + +  +  +I E   A
Sbjct: 122 MARQAEAERERRARITLAEAERQAAEKLREAAE--IISEHPMA 162
>2rpb_A Hypothetical membrane protein; SPFH domain; NMR {Pyrococcus horikoshii} Length = 113 Back     alignment and structure
>4fvg_A Stomatin; mixed alpha-beta fold, membrane scaffold, membrane protein; 1.80A {Mus musculus} PDB: 4fvj_A 4fvf_A Length = 133 Back     alignment and structure
>1win_A Flotillin 2; BAND 7 domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, cell adhesion; NMR {Mus musculus} SCOP: d.43.2.1 Length = 143 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query414
3bk6_A188 PH stomatin; archaea, trimer, coiled- coil, flotil 99.95
4fvg_A133 Stomatin; mixed alpha-beta fold, membrane scaffold 99.93
1win_A143 Flotillin 2; BAND 7 domain, structural genomics, r 99.85
2rpb_A113 Hypothetical membrane protein; SPFH domain; NMR {P 99.81
2zuo_A861 MVP, major vault protein; repeat domains, protein- 98.9
3v6i_B105 V-type ATP synthase, subunit (VAPC-therm); periphe 92.15
3v6i_B105 V-type ATP synthase, subunit (VAPC-therm); periphe 81.99
4efa_G119 V-type proton ATPase subunit G; heterotrimer, peri 80.2
>3bk6_A PH stomatin; archaea, trimer, coiled- coil, flotillin, SPFH, membrane fusion, trafficking, transmembrane, membrane protein; 3.20A {Pyrococcus horikoshii} Back     alignment and structure
Probab=99.95  E-value=3.2e-27  Score=214.89  Aligned_cols=142  Identities=40%  Similarity=0.642  Sum_probs=131.7

Q ss_pred             ccceEEEeeccceEeeeCCCceeecCCCceEEEEEEEEEEecCccccccccCCHHHHHHHHHHHHHHHHHhccchhhhHh
Q 038305          105 FVDRIAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPIYAVIQLAQTTMRSELGKITLDKTFE  184 (414)
Q Consensus       105 ~i~~v~~v~~~r~q~~~~~~~~v~TkD~~~v~vd~~v~yrI~dp~~~~~~~~~~~~~i~~~~~~~lR~vi~~~tl~ei~~  184 (414)
                      |++++..+ ++|.++++++.+.++|+||++|.|+++++|||.||..++|++.++...+.++++++||+++|+++++++++
T Consensus         2 fi~~v~~v-d~r~~~~~v~~~~v~TkD~~~V~v~~~v~yrI~dp~~~~~~v~~~~~~i~~~~~~~lR~vig~~~l~ell~   80 (188)
T 3bk6_A            2 IFEKAVIV-DLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLS   80 (188)
T ss_dssp             CEEECCCC-CSSCEEEEEEEEEEECTTSCEEEEEEEEEEEESCHHHHHHSSSCHHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred             ceEEEEEE-eeeEEEEecCCceeEcCCCCEEEEEEEEEEEECCHHHHHHHhcCHHHHHHHHHHHHHHHHHccCCHHHHHh
Confidence            67888777 99999999999899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhhcCcEEeEEEEeecCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 038305          185 ERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRAAMEMQAEAERKKRAQILESEGER  247 (414)
Q Consensus       185 ~R~~l~~~i~~~l~~~l~~~GI~I~~V~I~di~~p~~i~~ai~~~~~Aeq~~~a~i~eAe~e~  247 (414)
                      +|++|...+++.+++.+.+|||+|++|.|+||+||+++.++|+++++|++++++.+.+|||++
T Consensus        81 ~R~~i~~~i~~~l~~~~~~~GI~v~~v~I~~i~~p~ev~~a~~~~~~Aere~~A~i~~Aege~  143 (188)
T 3bk6_A           81 ERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQAEAERERRARITLAEAER  143 (188)
T ss_dssp             CHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcCeEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            999999999999999999999999999999999999999999998888877766655555543
>4fvg_A Stomatin; mixed alpha-beta fold, membrane scaffold, membrane protein; 1.80A {Mus musculus} PDB: 4fvj_A 4fvf_A Back     alignment and structure
>1win_A Flotillin 2; BAND 7 domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, cell adhesion; NMR {Mus musculus} SCOP: d.43.2.1 Back     alignment and structure
>2rpb_A Hypothetical membrane protein; SPFH domain; NMR {Pyrococcus horikoshii} Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Back     alignment and structure
>3v6i_B V-type ATP synthase, subunit (VAPC-therm); peripheral stator stalk, right handed coiled-coil, ATPase/SY ATP binding, membrane, hydrolase; 2.25A {Thermus thermophilus} PDB: 3k5b_G 3j0j_I Back     alignment and structure
>3v6i_B V-type ATP synthase, subunit (VAPC-therm); peripheral stator stalk, right handed coiled-coil, ATPase/SY ATP binding, membrane, hydrolase; 2.25A {Thermus thermophilus} PDB: 3k5b_G 3j0j_I Back     alignment and structure
>4efa_G V-type proton ATPase subunit G; heterotrimer, peripheral stalk, vacuolar ATPase, hydrolase; 2.82A {Saccharomyces cerevisiae} PDB: 4dl0_K 2k88_A 2kwy_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 414
d1wina_143 d.43.2.1 (A:) Flotillin-2 {Mouse (Mus musculus) [T 1e-27
>d1wina_ d.43.2.1 (A:) Flotillin-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 143 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: EF-Ts domain-like
superfamily: Band 7/SPFH domain
family: Band 7/SPFH domain
domain: Flotillin-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  104 bits (261), Expect = 1e-27
 Identities = 24/131 (18%), Positives = 56/131 (42%), Gaps = 9/131 (6%)

Query: 114 SLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDP---------KLASYGVENPIYAVIQ 164
           SL+   +    +   T + V++ + GV  VKI+           +     V++    V+Q
Sbjct: 11  SLEIMTLQPRCEDVETAEGVALTVTGVAQVKIMTEKELLAVACEQFLGKNVQDIKNVVLQ 70

Query: 165 LAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRA 224
             +  +RS LG +T+++ +++RD   + + E         G++ L + I+D+       +
Sbjct: 71  TLEGHLRSILGTLTVEQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDKVDYLS 130

Query: 225 AMEMQAEAERK 235
           ++     +   
Sbjct: 131 SLGKTQTSGPS 141

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query414
d1wina_143 Flotillin-2 {Mouse (Mus musculus) [TaxId: 10090]} 99.81
>d1wina_ d.43.2.1 (A:) Flotillin-2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: EF-Ts domain-like
superfamily: Band 7/SPFH domain
family: Band 7/SPFH domain
domain: Flotillin-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=6.5e-21  Score=163.64  Aligned_cols=124  Identities=20%  Similarity=0.289  Sum_probs=114.4

Q ss_pred             EEEeeccceEeeeCCCceeecCCCceEEEEEEEEEEecCccccc---------cccCCHHHHHHHHHHHHHHHHHhccch
Q 038305          109 IAYVHSLKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLAS---------YGVENPIYAVIQLAQTTMRSELGKITL  179 (414)
Q Consensus       109 v~~v~~~r~q~~~~~~~~v~TkD~~~v~vd~~v~yrI~dp~~~~---------~~~~~~~~~i~~~~~~~lR~vi~~~tl  179 (414)
                      ++.+ +++.++++++.+.++|+||++|.|+++++|||.|+..+.         +..++++..+.+.+++++|+++|++++
T Consensus         7 ~~ri-slr~~~l~~~~q~v~TkD~v~v~V~a~v~~rV~~~~~~~~~a~~~~l~~~~~~~~~~i~~~~~~~lR~vig~~~l   85 (143)
T d1wina_           7 GQRI-SLEIMTLQPRCEDVETAEGVALTVTGVAQVKIMTEKELLAVACEQFLGKNVQDIKNVVLQTLEGHLRSILGTLTV   85 (143)
T ss_dssp             CCSC-CCSCEEECCCEEEEECSSSCEEEECCEEEEEECCCSSCCHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             eeEe-eeeEEeecCCCceEECCCCCEEEEEEEEEEEEcCcHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhccccH
Confidence            4456 999999999999999999999999999999999987754         345678889999999999999999999


Q ss_pred             hhhHhhHHHHHHHHHHHHHHHHhhcCcEEeEEEEeecCCcHHHHHHHHhhHHHH
Q 038305          180 DKTFEERDTLNEKIVEAINVAARDWGLQCLRYEIRDISPPRGVRAAMEMQAEAE  233 (414)
Q Consensus       180 ~ei~~~R~~l~~~i~~~l~~~l~~~GI~I~~V~I~di~~p~~i~~ai~~~~~Ae  233 (414)
                      ++++++|++|.+.+++.+++.+.+|||+|++|.|+||++|++|.++|.++++|.
T Consensus        86 ~el~~~R~~i~~~v~~~i~~~l~~~Gi~v~~v~I~dI~~~~~~~~a~~~~q~A~  139 (143)
T d1wina_          86 EQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDKVDYLSSLGKTQTSG  139 (143)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHTTTTEEEEEEECCCEECTTCHHHHHCCCCCCC
T ss_pred             HHHHhCHHHHHHHHHHHHHHHHHHhCeEEEEEEEEecCCcHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999998876653