Citrus Sinensis ID: 038324


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80----
MTTKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI
ccHHHHHHHHHHHHHHHHcccccccccccEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHccc
ccHHHEEEEEHHHHHHHccccccccccccEEEEEcccccccccHHHccccccccccccccccccccccccccEHHHHHHHHccc
MTTKILIVQILTLCSIilpkansvvfkypavfnfgdsnsdtgeLAAGlgftldpvygrthfkassgrfcdgrLIVDFLSKFNNI
MTTKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHfkassgrfcdgRLIVDFLSKFNNI
MTTKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI
***KILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSK****
*TTKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI
MTTKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI
*TTKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTTKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query84 2.2.26 [Sep-21-2011]
Q3ECP6 408 GDSL esterase/lipase At1g no no 0.904 0.186 0.539 3e-16
Q9MAA1 379 GDSL esterase/lipase At3g no no 0.607 0.134 0.711 4e-14
Q9LIN2 380 GDSL esterase/lipase At3g no no 0.940 0.207 0.506 7e-14
Q7Y1X1 391 Esterase OS=Hevea brasili N/A no 0.916 0.196 0.468 3e-12
O80522 370 GDSL esterase/lipase At1g no no 0.619 0.140 0.576 1e-11
Q9FXB6 373 GDSL esterase/lipase LIP- no no 0.940 0.211 0.432 3e-11
Q9FXE5 372 Alpha-L-fucosidase 3 OS=A no no 0.619 0.139 0.528 6e-11
Q9LII9 371 GDSL esterase/lipase At3g no no 0.619 0.140 0.547 2e-09
Q9M153 382 GDSL esterase/lipase At4g no no 0.619 0.136 0.547 1e-08
Q9LY84 389 GDSL esterase/lipase At5g no no 0.619 0.133 0.490 4e-08
>sp|Q3ECP6|GDL22_ARATH GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana GN=At1g54790 PE=2 SV=1 Back     alignment and function desciption
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 52/76 (68%)

Query: 3  TKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFK 62
          TK+ +  ++      L  +NS+ F YP+ FNFGDSNSDTG+L AGLG  LD   G+  FK
Sbjct: 4  TKMKLFYVILFFISSLQISNSIDFNYPSAFNFGDSNSDTGDLVAGLGIRLDLPNGQNSFK 63

Query: 63 ASSGRFCDGRLIVDFL 78
           SS RFCDGRL++DFL
Sbjct: 64 TSSQRFCDGRLVIDFL 79





Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9MAA1|GDL49_ARATH GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana GN=At3g05180 PE=2 SV=1 Back     alignment and function description
>sp|Q9LIN2|GDL53_ARATH GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana GN=At3g26430 PE=2 SV=1 Back     alignment and function description
>sp|Q7Y1X1|EST_HEVBR Esterase OS=Hevea brasiliensis PE=1 SV=1 Back     alignment and function description
>sp|O80522|GDL2_ARATH GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1 Back     alignment and function description
>sp|Q9FXB6|LIP4_ARATH GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1 Back     alignment and function description
>sp|Q9FXE5|FUCO3_ARATH Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LII9|GDL54_ARATH GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana GN=At3g27950 PE=2 SV=1 Back     alignment and function description
>sp|Q9M153|GDL61_ARATH GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana GN=At4g01130 PE=2 SV=1 Back     alignment and function description
>sp|Q9LY84|GDL76_ARATH GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query84
224123238 380 predicted protein [Populus trichocarpa] 0.928 0.205 0.641 7e-22
147866291 1109 hypothetical protein VITISV_033902 [Viti 0.928 0.070 0.628 2e-21
255634915 377 unknown [Glycine max] 0.904 0.201 0.662 2e-21
356535119 377 PREDICTED: GDSL esterase/lipase At1g5479 0.904 0.201 0.662 2e-21
356573026 379 PREDICTED: GDSL esterase/lipase At1g5479 0.916 0.203 0.692 5e-21
296088291 233 unnamed protein product [Vitis vinifera] 0.928 0.334 0.628 4e-20
359487772 380 PREDICTED: LOW QUALITY PROTEIN: GDSL est 0.928 0.205 0.628 4e-20
22413094671 predicted protein [Populus trichocarpa] 0.845 1.0 0.666 2e-19
356504064 440 PREDICTED: GDSL esterase/lipase At1g5479 0.75 0.143 0.761 4e-19
124359708104 Lipolytic enzyme, G-D-S-L [Medicago trun 0.880 0.711 0.64 2e-18
>gi|224123238|ref|XP_002319029.1| predicted protein [Populus trichocarpa] gi|222857405|gb|EEE94952.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 50/78 (64%), Positives = 62/78 (79%)

Query: 1  MTTKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTH 60
          M ++ + +Q+ TL SI+   ANS+ F YP+VFNFGDSNSDTG+LAAGLGF LDP  G+ +
Sbjct: 1  MASRTIALQVFTLLSILSSVANSIDFNYPSVFNFGDSNSDTGDLAAGLGFLLDPPNGQIY 60

Query: 61 FKASSGRFCDGRLIVDFL 78
          FK  +GRFCDGRLIVDFL
Sbjct: 61 FKTPTGRFCDGRLIVDFL 78




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866291|emb|CAN82037.1| hypothetical protein VITISV_033902 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255634915|gb|ACU17816.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356535119|ref|XP_003536096.1| PREDICTED: GDSL esterase/lipase At1g54790-like [Glycine max] Back     alignment and taxonomy information
>gi|356573026|ref|XP_003554666.1| PREDICTED: GDSL esterase/lipase At1g54790-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|296088291|emb|CBI36736.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359487772|ref|XP_003633649.1| PREDICTED: LOW QUALITY PROTEIN: GDSL esterase/lipase At1g54790-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224130946|ref|XP_002328415.1| predicted protein [Populus trichocarpa] gi|222838130|gb|EEE76495.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356504064|ref|XP_003520819.1| PREDICTED: GDSL esterase/lipase At1g54790-like [Glycine max] Back     alignment and taxonomy information
>gi|124359708|gb|ABD32375.2| Lipolytic enzyme, G-D-S-L [Medicago truncatula] gi|124361051|gb|ABN09023.1| Lipolytic enzyme, G-D-S-L [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query84
TAIR|locus:2199496 408 AT1G54790 "AT1G54790" [Arabido 0.904 0.186 0.539 9.1e-17
TAIR|locus:2096269 379 AT3G05180 "AT3G05180" [Arabido 0.904 0.200 0.518 9.1e-15
TAIR|locus:2079286 380 AT3G26430 "AT3G26430" [Arabido 0.940 0.207 0.493 2.6e-14
UNIPROTKB|Q7Y1X1 391 Q7Y1X1 "Esterase" [Hevea brasi 0.892 0.191 0.487 3.5e-13
TAIR|locus:2008535 372 FXG1 "AT1G67830" [Arabidopsis 0.821 0.185 0.457 1.4e-12
TAIR|locus:2027594 373 AT1G56670 "AT1G56670" [Arabido 0.976 0.219 0.428 3.9e-12
TAIR|locus:2012270 370 AT1G09390 "AT1G09390" [Arabido 0.654 0.148 0.563 6.4e-12
TAIR|locus:2098048 365 AT3G62280 "AT3G62280" [Arabido 0.797 0.183 0.478 2.1e-09
TAIR|locus:2124993 382 AT4G01130 "AT4G01130" [Arabido 0.619 0.136 0.547 4.8e-09
TAIR|locus:2145693 389 AT5G14450 "AT5G14450" [Arabido 0.821 0.177 0.430 6.4e-09
TAIR|locus:2199496 AT1G54790 "AT1G54790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 212 (79.7 bits), Expect = 9.1e-17, P = 9.1e-17
 Identities = 41/76 (53%), Positives = 52/76 (68%)

Query:     3 TKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFK 62
             TK+ +  ++      L  +NS+ F YP+ FNFGDSNSDTG+L AGLG  LD   G+  FK
Sbjct:     4 TKMKLFYVILFFISSLQISNSIDFNYPSAFNFGDSNSDTGDLVAGLGIRLDLPNGQNSFK 63

Query:    63 ASSGRFCDGRLIVDFL 78
              SS RFCDGRL++DFL
Sbjct:    64 TSSQRFCDGRLVIDFL 79




GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
GO:0009832 "plant-type cell wall biogenesis" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2096269 AT3G05180 "AT3G05180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079286 AT3G26430 "AT3G26430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q7Y1X1 Q7Y1X1 "Esterase" [Hevea brasiliensis (taxid:3981)] Back     alignment and assigned GO terms
TAIR|locus:2008535 FXG1 "AT1G67830" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027594 AT1G56670 "AT1G56670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012270 AT1G09390 "AT1G09390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098048 AT3G62280 "AT3G62280" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124993 AT4G01130 "AT4G01130" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145693 AT5G14450 "AT5G14450" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query84
cd01837 315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 5e-15
PLN03156 351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 4e-05
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
 Score = 67.3 bits (165), Expect = 5e-15
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 6/57 (10%)

Query: 29 PAVFNFGDSNSDTGELAAGLGFTLDPV----YGRTHFKASSGRFCDGRLIVDFLSKF 81
          PA+F FGDS  DTG        TL       YG       +GRF +GRLI+DF+++ 
Sbjct: 1  PALFVFGDSLVDTGNNNYL--PTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEA 55


The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315

>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 84
PLN03156 351 GDSL esterase/lipase; Provisional 99.91
cd01837 315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 99.84
PRK15381 408 pathogenicity island 2 effector protein SseJ; Prov 99.68
cd01847 281 Triacylglycerol_lipase_like Triacylglycerol lipase 99.55
cd01846 270 fatty_acyltransferase_like Fatty acyltransferase-l 99.51
COG3240 370 Phospholipase/lecithinase/hemolysin [Lipid metabol 97.74
PF00657 234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 97.23
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information
Probab=99.91  E-value=4.6e-25  Score=167.75  Aligned_cols=61  Identities=34%  Similarity=0.559  Sum_probs=52.9

Q ss_pred             cCCCCCEEEEccccHHHhhhcccc--cCCCCCCCCCCCCCC-CCCccCCCCCcHHHHHHhhcCC
Q 038324           24 VVFKYPAVFNFGDSNSDTGELAAG--LGFTLDPVYGRTHFK-ASSGRFCDGRLIVDFLSKFNNI   84 (84)
Q Consensus        24 ~~~~~~~i~~FGDSlsDtGn~~~~--~~~~~~~Pyg~~~~~-~ptGRfSnG~~~~Dfla~~lgl   84 (84)
                      ...++++||+||||++||||++..  ..+.++||||++|++ +|||||||||+|+|||||.||+
T Consensus        23 ~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl   86 (351)
T PLN03156         23 TCAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGL   86 (351)
T ss_pred             ccCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCC
Confidence            455689999999999999998642  234678999999985 7999999999999999999986



>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query84
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 8e-06
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score = 40.9 bits (95), Expect = 8e-06
 Identities = 13/56 (23%), Positives = 16/56 (28%), Gaps = 3/56 (5%)

Query: 27 KYPAVFNFGDSNSDTG---ELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLS 79
           Y  +  FGDS SD G   + A   G T            +      G      L 
Sbjct: 14 PYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLG 69


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query84
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 99.69
2q0q_A 216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 93.27
3dci_A 232 Arylesterase; SGNH_hydrolase SUBF structural genom 88.56
3mil_A 240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 85.03
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=99.69  E-value=9.9e-18  Score=132.39  Aligned_cols=58  Identities=26%  Similarity=0.207  Sum_probs=45.8

Q ss_pred             cCCCCCEEEEccccHHHhhhcccccCCC---CC--CCCCCCCCCCCCccCC-CCCcHHHHHHhhcCC
Q 038324           24 VVFKYPAVFNFGDSNSDTGELAAGLGFT---LD--PVYGRTHFKASSGRFC-DGRLIVDFLSKFNNI   84 (84)
Q Consensus        24 ~~~~~~~i~~FGDSlsDtGn~~~~~~~~---~~--~Pyg~~~~~~ptGRfS-nG~~~~Dfla~~lgl   84 (84)
                      ...++++||+||||+|||||........   ..  .|+|++||   +|||| |||+|+|||||.||+
T Consensus        11 ~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~g~~~~---~Gr~s~~G~~~~D~ia~~lgl   74 (632)
T 3kvn_X           11 APSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQ---NGSGEIFGPTAPMLLGNQLGI   74 (632)
T ss_dssp             CCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBCSSSCC---TTSSCCBCCCHHHHHHHHTTC
T ss_pred             CCCCCccEEEEccccccCCCcccccCCcCCccccccCCCCccc---cCcccccCCchHHHHHHHcCC
Confidence            3568999999999999999987543311   11  12377776   69999 999999999999986



>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query84
d3bzwa1 248 Uncharacterized protein BT2961 {Bacteroides thetai 91.7
d1esca_ 302 Esterase {Streptomyces scabies [TaxId: 1930]} 80.76
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein BT2961
species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=91.70  E-value=0.046  Score=32.97  Aligned_cols=14  Identities=36%  Similarity=0.268  Sum_probs=11.6

Q ss_pred             CCCEEEEccccHHH
Q 038324           27 KYPAVFNFGDSNSD   40 (84)
Q Consensus        27 ~~~~i~~FGDSlsD   40 (84)
                      .-++|++||||+++
T Consensus         7 ~~kkI~~~GDS~T~   20 (248)
T d3bzwa1           7 QGKKVGYIGDSITD   20 (248)
T ss_dssp             TTCEEEEEESTTTC
T ss_pred             CCCEEEEEehHHcc
Confidence            34699999999876



>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure