Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
ID Alignment Graph Length
Definition
E-value
Query 84
cd01837
315
cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase
5e-15
PLN03156
351
PLN03156, PLN03156, GDSL esterase/lipase; Provisio
4e-05
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases
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Score = 67.3 bits (165), Expect = 5e-15
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 29 PAVFNFGDSNSDTGELAAGLGFTLDPV----YGRTHFKASSGRFCDGRLIVDFLSKF 81
PA+F FGDS DTG TL YG +GRF +GRLI+DF+++
Sbjct: 1 PALFVFGDSLVDTGNNNYL--PTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEA 55
The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional
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Score = 39.3 bits (92), Expect = 4e-05
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 12/80 (15%)
Query: 5 ILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGE---LAAGLGFTLDPVYGRTHF 61
+L+ Q+L L + K PA+ FGDS+ D G ++ +P YGR
Sbjct: 11 LLLAQLLVLVAETCAK-------VPAIIVFGDSSVDAGNNNQISTVAKSNFEP-YGRDFP 62
Query: 62 KAS-SGRFCDGRLIVDFLSK 80
+GRFC+GR+ DF+S+
Sbjct: 63 GGRPTGRFCNGRIAPDFISE 82
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability
Query
84
PLN03156
351
GDSL esterase/lipase; Provisional
99.91
cd01837
315
SGNH_plant_lipase_like SGNH_plant_lipase_like, a p
99.84
PRK15381
408
pathogenicity island 2 effector protein SseJ; Prov
99.68
cd01847
281
Triacylglycerol_lipase_like Triacylglycerol lipase
99.55
cd01846
270
fatty_acyltransferase_like Fatty acyltransferase-l
99.51
COG3240
370
Phospholipase/lecithinase/hemolysin [Lipid metabol
97.74
PF00657
234
Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter
97.23
>PLN03156 GDSL esterase/lipase; Provisional
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Probab=99.91 E-value=4.6e-25 Score=167.75 Aligned_cols=61 Identities=34% Similarity=0.559 Sum_probs=52.9
Q ss_pred cCCCCCEEEEccccHHHhhhcccc--cCCCCCCCCCCCCCC-CCCccCCCCCcHHHHHHhhcCC
Q 038324 24 VVFKYPAVFNFGDSNSDTGELAAG--LGFTLDPVYGRTHFK-ASSGRFCDGRLIVDFLSKFNNI 84 (84)
Q Consensus 24 ~~~~~~~i~~FGDSlsDtGn~~~~--~~~~~~~Pyg~~~~~-~ptGRfSnG~~~~Dfla~~lgl 84 (84)
...++++||+||||++||||++.. ..+.++||||++|++ +|||||||||+|+|||||.||+
T Consensus 23 ~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl 86 (351)
T PLN03156 23 TCAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGL 86 (351)
T ss_pred ccCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCC
Confidence 455689999999999999998642 234678999999985 7999999999999999999986
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases
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Probab=99.84 E-value=9.4e-22 Score=145.32 Aligned_cols=56 Identities=39% Similarity=0.573 Sum_probs=49.8
Q ss_pred CEEEEccccHHHhhhcccccC--CCCCCCCCCCCCCCCCccCCCCCcHHHHHHhhcCC
Q 038324 29 PAVFNFGDSNSDTGELAAGLG--FTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI 84 (84)
Q Consensus 29 ~~i~~FGDSlsDtGn~~~~~~--~~~~~Pyg~~~~~~ptGRfSnG~~~~Dfla~~lgl 84 (84)
++||+||||++||||+..... ..+.||||++|+++|+||||||++|+||||+.+|+
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~~p~GRfSnG~~~~d~la~~lgl 58 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGL 58 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCCCCCccccCCchhhhhhhhhccC
Confidence 589999999999999875332 35789999999999999999999999999999985
The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
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Probab=99.68 E-value=1.5e-17 Score=129.82 Aligned_cols=53 Identities=30% Similarity=0.366 Sum_probs=43.5
Q ss_pred CCCCCEEEEccccHHHhhhcccccCCCCCCCCCCCCCCCCCccCCCCCcHHHHHHhh
Q 038324 25 VFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKF 81 (84)
Q Consensus 25 ~~~~~~i~~FGDSlsDtGn~~~~~~~~~~~Pyg~~~~~~ptGRfSnG~~~~Dfla~~ 81 (84)
...+++||+||||++||||+.........||||++| +|||||||+|+||||..
T Consensus 139 ~~~~~ai~vFGDSlsDtGnn~y~~t~~~~PPyG~~f----tGRFSNG~v~~DfLA~~ 191 (408)
T PRK15381 139 LGDITRLVFFGDSLSDSLGRMFEKTHHILPSYGQYF----GGRFTNGFTWTEFLSSP 191 (408)
T ss_pred cCCCCeEEEeCCccccCCCccccccccCCCCCCCCC----CcccCCCchhhheeccc
Confidence 357899999999999998865422224589999976 69999999999999964
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases
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Probab=99.55 E-value=1.4e-15 Score=110.70 Aligned_cols=46 Identities=30% Similarity=0.278 Sum_probs=38.7
Q ss_pred CCEEEEccccHHHhhhcccccCCCCCCCCCCCCCCCCCccCCCCCcHHHHHHhhcCC
Q 038324 28 YPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI 84 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~~~~~~~~~~Pyg~~~~~~ptGRfSnG~~~~Dfla~~lgl 84 (84)
|++||+||||++|+||+.... + +.+|+|||||||+++|++++.+|+
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~------~-----~~~~~gRFsnG~~~~d~~~~~~~~ 46 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG------V-----GAAGGGRFTVNDGSIWSLGVAEGY 46 (281)
T ss_pred CCceEEecCcccccCCCCccc------c-----CCCCCcceecCCcchHHHHHHHHc
Confidence 579999999999999987532 1 246889999999999999998764
The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases
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Probab=99.51 E-value=9.9e-15 Score=104.67 Aligned_cols=51 Identities=31% Similarity=0.436 Sum_probs=38.7
Q ss_pred EEEEccccHHHhhhcccccCCCCCCCCCCCCCCCCCccCCCCCcHHHHHHhhcCC
Q 038324 30 AVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI 84 (84)
Q Consensus 30 ~i~~FGDSlsDtGn~~~~~~~~~~~Pyg~~~~~~ptGRfSnG~~~~Dfla~~lgl 84 (84)
++|+||||++|+||....... ..+|++. ..|+||||||++|+|+||+.+|+
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~-~~~~~~~---~~~~grfsnG~~w~d~la~~lg~ 51 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGG-SNPPPSP---PYFGGRFSNGPVWVEYLAATLGL 51 (270)
T ss_pred CeEEeeCccccCCcchhhcCC-CCCCCCC---CCCCCccCCchhHHHHHHHHhCC
Confidence 489999999999998753221 1233333 34679999999999999999874
The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
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Probab=97.74 E-value=2.8e-05 Score=60.89 Aligned_cols=57 Identities=21% Similarity=0.265 Sum_probs=34.8
Q ss_pred cCCCCCEEEEccccHHHhhhcccccCCCCCCCCCCCCCCCCCccCCC--CCcHHHHHHhhcC
Q 038324 24 VVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCD--GRLIVDFLSKFNN 83 (84)
Q Consensus 24 ~~~~~~~i~~FGDSlsDtGn~~~~~~~~~~~Pyg~~~~~~ptGRfSn--G~~~~Dfla~~lg 83 (84)
..+++..+++||||+||+|+..........+ ..|...|-.++.+ |..+++..++-+|
T Consensus 25 ~~~~~~~l~vfGDSlSDsg~~~~~a~~~~~~---~~~~~~~gp~~~~G~~~~~~~~~p~~lg 83 (370)
T COG3240 25 SLAPFQRLVVFGDSLSDSGNYYRPAGHHGDP---GSYGTIPGPSYQNGNGYTYVTVVPETLG 83 (370)
T ss_pred cccccceEEEeccchhhcccccCcccccCCc---cccccccCCcccCCCceeeeccchhhhc
Confidence 4568999999999999999987543322222 1122233345554 5556666665554
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []
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Probab=97.23 E-value=0.0003 Score=47.67 Aligned_cols=11 Identities=45% Similarity=0.715 Sum_probs=10.4
Q ss_pred EEEccccHHHh
Q 038324 31 VFNFGDSNSDT 41 (84)
Q Consensus 31 i~~FGDSlsDt 41 (84)
|++||||++|.
T Consensus 1 i~~fGDS~td~ 11 (234)
T PF00657_consen 1 IVVFGDSLTDG 11 (234)
T ss_dssp EEEEESHHHHT
T ss_pred CEEEeehhccc
Confidence 68999999998
Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Homologous Structure Domains