Citrus Sinensis ID: 038347


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MLEDNLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRLGSLSGLYSGLGWSTLGRSFSMGARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGGIFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGFSGAVAAAASHCFDTAKNRSQCIVLPK
ccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccHHHcHHHHHHHHHHHHHHHHcccHHHHHHcccHHHHHHccccccccccccHHHHHHHHccccccccHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
ccHHHHHHHHHHHHHHHHHHHHHHHcccHHEHHHHHHcccccccccHHHHEEEEcccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcHHEEEEEcccEEEEEEEEEcccccccccHHHHHHHcHHHHHHHHHccccccHHHHccccccHcccccccccHHHHHHHcccEEcccccccccccccccHHHHHHccHHHHHHccccHHHHcccccHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccEEEccc
MLEDNLFASHAIAGVGSVALAssltypldTIKVLKqvgsgsnkqlsSLQVLNRLGSlsglysglgwstlgrsfsmgarFGVYEILSAFYkdgrednyVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVqtstsvaehvtVAPVIRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALqeypwmmsgsgrpplvssvrrpsdivsfeGWGAFWRGLrsgvvrdsvfggIFFSSWQFLHRAMLDWkavgmdpeprsdeeigplpplyvSLAAGFSGAVAAAASHCfdtaknrsqcivlpk
MLEDNLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRLGSLSGLYSGLGWSTLGRSFSMGARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIrvqtstsvaehvtvaPVIRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGGIFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGFSGAVAAAASHCFDTaknrsqcivlpk
MLEDNLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRlgslsglysglgwstlgRSFSMGARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGGIFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLaagfsgavaaaasHCFDTAKNRSQCIVLPK
*****LFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRLGSLSGLYSGLGWSTLGRSFSMGARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMM**************PSDIVSFEGWGAFWRGLRSGVVRDSVFGGIFFSSWQFLHRAMLDWKAVG************PLPPLYVSLAAGFSGAVAAAASHCFDTAKNRSQCIV***
*****LFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSG**KQLSSLQVLNRLGSLSGLYSGLGWSTLGRSFSMGARFGVYEILSAFYK*******VYVSEALMAGMVAGAAEALISSPFELMKVRAQVSS*IRVQTSTSVAEHVTVAPVIRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGGIFFSSWQFLHRAMLDWKA***************LPPLYVSLAAGFSGAVAAAASHCFDTAKNRSQCIVL**
MLEDNLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRLGSLSGLYSGLGWSTLGRSFSMGARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGGIFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGFSGAVAAAASHCFDTAKNRSQCIVLPK
MLEDNLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRLGSLSGLYSGLGWSTLGRSFSMGARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGGIFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGFSGAVAAAASHCFDTAKNRSQCIVLPK
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
oooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
oooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLEDNLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRLGSLSGLYSGLGWSTLGRSFSMGARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGGIFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGFSGAVAAAASHCFDTAKNRSQCIVLPK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query308 2.2.26 [Sep-21-2011]
Q54FU9329 Mitochondrial substrate c yes no 0.759 0.711 0.241 3e-09
Q54PY7318 Probable mitochondrial 2- no no 0.509 0.493 0.248 4e-08
Q20799588 Putative calcium-binding yes no 0.555 0.290 0.251 1e-07
Q55DY8308 Mitoferrin OS=Dictyosteli no no 0.512 0.512 0.280 2e-07
Q3MHI3311 Solute carrier family 25 yes no 0.762 0.755 0.251 3e-07
O59674297 Uncharacterized mitochond yes no 0.711 0.737 0.248 6e-07
Q5XH95513 Calcium-binding mitochond no no 0.522 0.313 0.246 7e-07
Q9ER18307 Mitochondrial brown fat u N/A no 0.379 0.381 0.325 7e-07
Q95J75315 Mitochondrial folate tran N/A no 0.759 0.742 0.234 8e-07
Q6NYZ6469 Calcium-binding mitochond no no 0.522 0.343 0.246 1e-06
>sp|Q54FU9|MCFW_DICDI Mitochondrial substrate carrier family protein W OS=Dictyostelium discoideum GN=mcfW PE=3 SV=1 Back     alignment and function desciption
 Score = 62.8 bits (151), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 113/281 (40%), Gaps = 47/281 (16%)

Query: 13  AGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSL--QVLNRLGSLSGLYSGLGWSTLG 70
           AG G+  +AS  T PLD IK   QV + SNK + S    +L+R G +  LY GL  + +G
Sbjct: 42  AGCGAGFMASLFTTPLDVIKTTLQVDNSSNKTIMSTVKSILDRKGGVKNLYLGLKPTLVG 101

Query: 71  RSFSMGARFGVYEILSAFYKDGREDNYVYVSEA----LMAGMVAGAAEALISSPFELMKV 126
           +  S    F  Y      +    + + +   E+    + + ++AGAA ++ +SP  L+K 
Sbjct: 102 QIPSWAVYFSTYTFCKELFTKENDKHSLLEKESPLIFMTSAIIAGAATSICTSPIWLIKT 161

Query: 127 RAQVSSVIRVQTSTSVAEHVTVAPV----IRRLLHGYTPDLKALSHSA-------GLLSI 175
           R     ++  Q       H  V+       R L  G  P L  + H            SI
Sbjct: 162 RFITQEMVGRQKKYRGIVHSMVSIYHEEGFRGLYKGLGPSLLGVLHVGVQFPLYEKFKSI 221

Query: 176 LTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSD------------------------ 211
           L  K+ +    + E   M++ S    + S V  P +                        
Sbjct: 222 LKEKNKNKELGIVEI--MIASSVSKIIASVVAYPHEVLRARSQDSSPDSPNRTYRGNIIQ 279

Query: 212 ----IVSFEGWGAFWRGLRSGVVRDSVFGGIFFSSWQFLHR 248
               IV  EGW   +RG+   ++R +    I F+S++++ +
Sbjct: 280 MFKQIVREEGWRGLYRGMGVNLLRVTPSCVITFTSYEYIKK 320




Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane.
Dictyostelium discoideum (taxid: 44689)
>sp|Q54PY7|M2OM_DICDI Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1 Back     alignment and function description
>sp|Q20799|CMC2_CAEEL Putative calcium-binding mitochondrial carrier F55A11.4 OS=Caenorhabditis elegans GN=F55A11.4 PE=5 SV=1 Back     alignment and function description
>sp|Q55DY8|MFRN_DICDI Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1 Back     alignment and function description
>sp|Q3MHI3|S2548_BOVIN Solute carrier family 25 member 48 OS=Bos taurus GN=SLC25A48 PE=2 SV=1 Back     alignment and function description
>sp|O59674|YB8B_SCHPO Uncharacterized mitochondrial carrier C29A3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC29A3.11c PE=3 SV=1 Back     alignment and function description
>sp|Q5XH95|SCMC2_XENTR Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1 Back     alignment and function description
>sp|Q9ER18|UCP1_PHOSU Mitochondrial brown fat uncoupling protein 1 OS=Phodopus sungorus GN=UCP1 PE=2 SV=1 Back     alignment and function description
>sp|Q95J75|MFTC_MACFA Mitochondrial folate transporter/carrier OS=Macaca fascicularis GN=SLC25A32 PE=2 SV=1 Back     alignment and function description
>sp|Q6NYZ6|SCM2A_DANRE Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query308
225446821377 PREDICTED: mitochondrial substrate carri 1.0 0.816 0.717 1e-126
224120582376 predicted protein [Populus trichocarpa] 0.996 0.816 0.690 1e-121
449449397381 PREDICTED: uncharacterized protein LOC10 1.0 0.808 0.660 1e-118
297800708378 mitochondrial substrate carrier family p 1.0 0.814 0.607 1e-110
363806958380 uncharacterized protein LOC100789418 [Gl 0.970 0.786 0.649 1e-110
18414359378 Mitochondrial substrate carrier family p 1.0 0.814 0.604 1e-109
388490790381 unknown [Medicago truncatula] 0.993 0.803 0.608 1e-106
255572077378 protein with unknown function [Ricinus c 0.996 0.812 0.703 1e-105
356512093380 PREDICTED: mitochondrial carnitine/acylc 0.970 0.786 0.652 1e-102
388507434314 unknown [Lotus japonicus] 0.990 0.971 0.627 1e-100
>gi|225446821|ref|XP_002283420.1| PREDICTED: mitochondrial substrate carrier family protein W [Vitis vinifera] gi|302143540|emb|CBI22101.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 223/311 (71%), Positives = 257/311 (82%), Gaps = 3/311 (0%)

Query: 1   MLEDNLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNR---LGSL 57
           +L++N+ A+HAI G GSV LAS LTYPLDT+K L QVGSGS KQL + Q+L+R   L   
Sbjct: 4   LLKNNVLAAHAIVGAGSVTLASLLTYPLDTLKTLVQVGSGSGKQLGTAQILDRVRILSGT 63

Query: 58  SGLYSGLGWSTLGRSFSMGARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALI 117
           SGLY+G GWSTL R   +GARFGVYEIL+AF+KDGREDNYV V EA  +GMVAGA E+LI
Sbjct: 64  SGLYNGFGWSTLMRISGLGARFGVYEILTAFHKDGREDNYVSVPEAFTSGMVAGAMESLI 123

Query: 118 SSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHGYTPDLKALSHSAGLLSILT 177
           SSPFE++KVR QV+S   + +S SVAE   V P I RLLHGYTPD KAL+HS GLLS LT
Sbjct: 124 SSPFEIIKVRKQVTSASLIPSSRSVAEKSAVVPSIARLLHGYTPDQKALNHSVGLLSTLT 183

Query: 178 NKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGG 237
           +KHP+++ ALQEYPWMM+GSGRPP V  VRRP D++S EGWGA WRGLRSGVVRD++FGG
Sbjct: 184 SKHPNMIGALQEYPWMMTGSGRPPPVFHVRRPLDVISLEGWGALWRGLRSGVVRDTIFGG 243

Query: 238 IFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGFSGAVAAAASHCFDTA 297
           +FFS WQFLHRAMLDWKA GMDP PRSD+EIGPL PL VSLAAGFSG+VAAAASH FDTA
Sbjct: 244 VFFSLWQFLHRAMLDWKAAGMDPSPRSDDEIGPLSPLAVSLAAGFSGSVAAAASHSFDTA 303

Query: 298 KNRSQCIVLPK 308
           K+RSQCIVLPK
Sbjct: 304 KSRSQCIVLPK 314




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120582|ref|XP_002330978.1| predicted protein [Populus trichocarpa] gi|222872770|gb|EEF09901.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449449397|ref|XP_004142451.1| PREDICTED: uncharacterized protein LOC101213110 [Cucumis sativus] gi|449513228|ref|XP_004164267.1| PREDICTED: uncharacterized LOC101213110 [Cucumis sativus] Back     alignment and taxonomy information
>gi|297800708|ref|XP_002868238.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297314074|gb|EFH44497.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|363806958|ref|NP_001242567.1| uncharacterized protein LOC100789418 [Glycine max] gi|255636326|gb|ACU18502.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|18414359|ref|NP_567453.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|42572913|ref|NP_974553.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|42572915|ref|NP_974554.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|15451218|gb|AAK96880.1| Unknown protein [Arabidopsis thaliana] gi|30725620|gb|AAP37832.1| At4g15610 [Arabidopsis thaliana] gi|222424236|dbj|BAH20076.1| AT4G15010 [Arabidopsis thaliana] gi|332658137|gb|AEE83537.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|332658138|gb|AEE83538.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|332658139|gb|AEE83539.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|388490790|gb|AFK33461.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|255572077|ref|XP_002526979.1| protein with unknown function [Ricinus communis] gi|223533670|gb|EEF35406.1| protein with unknown function [Ricinus communis] Back     alignment and taxonomy information
>gi|356512093|ref|XP_003524755.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein CACL-like [Glycine max] Back     alignment and taxonomy information
>gi|388507434|gb|AFK41783.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query308
TAIR|locus:2129595378 AT4G15010 [Arabidopsis thalian 1.0 0.814 0.530 3.2e-88
ZFIN|ZDB-GENE-040724-220481 si:dkey-204f11.59 "si:dkey-204 0.568 0.363 0.263 1.7e-05
UNIPROTKB|F1NYW4272 F1NYW4 "Uncharacterized protei 0.568 0.643 0.252 3.1e-05
TAIR|locus:2017884296 BAC2 "AT1G79900" [Arabidopsis 0.373 0.388 0.277 4.8e-05
DICTYBASE|DDB_G0269470308 mcfF "putative mitoferrin" [Di 0.672 0.672 0.234 6.2e-05
UNIPROTKB|B3KR64571 SLC25A12 "cDNA FLJ33752 fis, c 0.389 0.210 0.248 7.2e-05
UNIPROTKB|F1S086413 SLC25A12 "Uncharacterized prot 0.389 0.290 0.240 8.4e-05
UNIPROTKB|I3L8T2423 SLC25A12 "Uncharacterized prot 0.389 0.283 0.240 9e-05
UNIPROTKB|F1NYW3505 F1NYW3 "Uncharacterized protei 0.568 0.346 0.252 9.9e-05
UNIPROTKB|O75746678 SLC25A12 "Calcium-binding mito 0.389 0.176 0.248 0.00011
TAIR|locus:2129595 AT4G15010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
 Identities = 165/311 (53%), Positives = 218/311 (70%)

Query:     1 MLEDNLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRXXXXXXX 60
             +LE++ FA+HAIA   SV+L ++L YPLDTIK + QVGSG NK+LSS QV NR       
Sbjct:     4 LLENHQFATHAIAASASVSLGTALAYPLDTIKTIIQVGSGPNKKLSSFQVFNRVLRFSGY 63

Query:    61 XXXXX---XXXXXRSFSMGARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALI 117
                          R    GARFGVYEIL+AFYKDGR DNYV V EA +AG+V GAAE ++
Sbjct:    64 SGLYSGLGSLTLGRISGFGARFGVYEILTAFYKDGRHDNYVSVGEAFLAGLVGGAAETVM 123

Query:   118 SSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHGYTPDLKALSHSAGLLSILT 177
             +SPFEL+KVR QV++  R   +++VAE   V+P+I +LL  YT D+K+L+ +  LLS+L 
Sbjct:   124 TSPFELIKVRKQVTAASRAPNASAVAETAPVSPMITKLLRRYTLDVKSLTQTVSLLSVLN 183

Query:   178 NKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGG 237
             +KHP++  ALQEYPWMM+G+G PP    V+RP D+ S EG+ A WR LRSG++RD ++GG
Sbjct:   184 HKHPNMTAALQEYPWMMTGTGNPPSAMDVKRPLDVASLEGYRALWRNLRSGLIRDCIYGG 243

Query:   238 IFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLXXXXXXXXXXXXXHCFDTA 297
             +FFS+WQFLH AM+ WKAVGM+P P S+EE+GPL P+ +SL             H FDTA
Sbjct:   244 VFFSTWQFLHEAMVGWKAVGMNPLPSSEEEVGPLSPVAISLAAGISGAVAAAASHSFDTA 303

Query:   298 KNRSQCIVLPK 308
             + R+QC++LPK
Sbjct:   304 RTRAQCVILPK 314




GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0006839 "mitochondrial transport" evidence=ISS
ZFIN|ZDB-GENE-040724-220 si:dkey-204f11.59 "si:dkey-204f11.59" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NYW4 F1NYW4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
TAIR|locus:2017884 BAC2 "AT1G79900" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269470 mcfF "putative mitoferrin" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|B3KR64 SLC25A12 "cDNA FLJ33752 fis, clone BRCAN2000364, highly similar to Calcium-binding mitochondrial carrier protein Aralar1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1S086 SLC25A12 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|I3L8T2 SLC25A12 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NYW3 F1NYW3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|O75746 SLC25A12 "Calcium-binding mitochondrial carrier protein Aralar1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-08
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-05
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 0.002
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 0.002
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 7/91 (7%)

Query: 7  FASHAIAGVGSVALASSLTYPLDTIKVLKQV--GSGSNKQLSSLQVLNRL---GSLSGLY 61
          F +  +AG  + A+A+++TYPLD +K   Q     GS K    L    ++     + GLY
Sbjct: 5  FLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLY 64

Query: 62 SGLGWSTLGRSFSMGA-RFGVYEILSAFYKD 91
           GL    L R     A  FG YE L      
Sbjct: 65 KGLL-PNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 308
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 99.98
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.97
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.97
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.97
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.97
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.97
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.97
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 99.97
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.96
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.96
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.96
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.96
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.95
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.94
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.93
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.92
KOG0770353 consensus Predicted mitochondrial carrier protein 99.92
KOG0765333 consensus Predicted mitochondrial carrier protein 99.91
KOG0036463 consensus Predicted mitochondrial carrier protein 99.91
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.91
KOG0766297 consensus Predicted mitochondrial carrier protein 99.9
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.9
KOG0769308 consensus Predicted mitochondrial carrier protein 99.85
KOG1519297 consensus Predicted mitochondrial carrier protein 99.85
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.83
KOG2745321 consensus Mitochondrial carrier protein [General f 99.79
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.67
KOG1519297 consensus Predicted mitochondrial carrier protein 99.63
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.63
KOG2745321 consensus Mitochondrial carrier protein [General f 99.03
KOG2954427 consensus Mitochondrial carrier protein [General f 98.62
KOG2954427 consensus Mitochondrial carrier protein [General f 98.05
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=5.1e-47  Score=331.44  Aligned_cols=225  Identities=25%  Similarity=0.307  Sum_probs=199.0

Q ss_pred             hhHHHHHHHhHHhHhHhhhcCcHHHHHHHHhhCCC---CCCcCCHHHHHHHhhccc---ccccCchhHhhhHHhhhhhHH
Q 038347            6 LFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSG---SNKQLSSLQVLNRLGSLS---GLYSGLGWSTLGRSFSMGARF   79 (308)
Q Consensus         6 ~~~~~~~aG~~a~~~~~~~~~Pld~iK~r~Q~~~~---~~~~~~~~~~~~~i~~~~---gly~G~~~~~~~~~~~~~~~f   79 (308)
                      ..++.++||++||+++.+++.|||++|+|+|++.+   ..++.++.+.+++|+++|   +||+|..+++++.+++.+++|
T Consensus        26 ~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf  105 (320)
T KOG0752|consen   26 TGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQF  105 (320)
T ss_pred             HHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhhh
Confidence            56788999999999999999999999999999984   467889999999999988   899999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCCcchHHHHHHHHhHHHHHHHHhhChHHHHHHHHhhccccccccccchhhhhhhhhhHHHhhccc
Q 038347           80 GVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHGY  159 (308)
Q Consensus        80 ~~y~~~k~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~P~e~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  159 (308)
                      ..||..++.......++..++..++++|++||+++.++++|+|++|+|+-++....                        
T Consensus       106 ~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~------------------------  161 (320)
T KOG0752|consen  106 SAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELK------------------------  161 (320)
T ss_pred             hHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccc------------------------
Confidence            99999998654433333678899999999999999999999999999999887542                        


Q ss_pred             ccchhhhhhhhhhhhhhcccchhhhHhhhhccccccCCCCCCCccccccchhhhhhcccchhccccccchhhhcccchhH
Q 038347          160 TPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGGIF  239 (308)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~g~y~G~~~~~lr~~~~~~~~  239 (308)
                                         .|+++.+++                      ++||++||++|||||+.|++++.+|+.++.
T Consensus       162 -------------------~y~~l~~a~----------------------~~I~~~eGi~gfYrGl~ptllgi~Pyag~~  200 (320)
T KOG0752|consen  162 -------------------VYRGLLHAF----------------------KTIYREEGIRGFYRGLGPTLLGIAPYAGIN  200 (320)
T ss_pred             -------------------cCCcHHHHH----------------------HHHHHhcchhhhhcCcchhhheehhhhhhH
Confidence                               577888877                      599999999999999999999999999999


Q ss_pred             HHHHHHHHHH-HHhhhhcCCCCCCCCCCCCCCCChHHHHHHHhHHHHhhhhhhchHHHHhhhhccccCC
Q 038347          240 FSSWQFLHRA-MLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGFSGAVAAAASHCFDTAKNRSQCIVLP  307 (308)
Q Consensus       240 ~~~ye~~k~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lag~~a~~~t~P~Dvvktr~Q~~~~~  307 (308)
                      |.+||.+|++ +...            ..+...+.+..+++|++||+++.+++||||+||+|||++.++
T Consensus       201 F~~Yd~lk~~~~~~~------------~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~  257 (320)
T KOG0752|consen  201 FFAYDTLKKWQYLKS------------SGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLK  257 (320)
T ss_pred             HHHHHHHHHhhcccc------------cccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCcc
Confidence            9999999996 2211            111336778999999999999999999999999999998763



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 5e-04
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 49/284 (17%) Query: 14 GVGSVA-LASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRXXXXXXXXXXXXXXXXXRS 72 G G+ A +A +T+PLDT KV Q+ G ++ L + RS Sbjct: 7 GAGTAACIADLITFPLDTAKVRLQI-QGESQGLVRTAASAQYRGVLGTILTMVRTEGPRS 65 Query: 73 FSMG-------------ARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISS 119 G R G+Y+ + FY G E + + L+AG GA ++ Sbjct: 66 LYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSE--HAGIGSRLLAGSTTGALAVAVAQ 123 Query: 120 PFELMKVRAQVSSVI----RVQTSTSVAEHVTVAPVIRRLLHGYTPDL--KALSHSAGLL 173 P +++KVR Q + R Q++ + + IR L G +P++ A+ + A L+ Sbjct: 124 PTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELV 183 Query: 174 SILTNKHPDLMNAL--QEYPW-MMSGSGRPPLVSSVRRPSDIVSF--------------- 215 + K L L + P S G + + P D+V Sbjct: 184 TYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGH 243 Query: 216 --------EGWGAFWRGLRSGVVRDSVFGGIFFSSWQFLHRAML 251 EG AF++G +R + + F +++ L RA++ Sbjct: 244 CALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM 287

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-18
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-06
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-10
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-08
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score = 83.5 bits (207), Expect = 1e-18
 Identities = 48/308 (15%), Positives = 84/308 (27%), Gaps = 91/308 (29%)

Query: 8   ASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRLGSLS--------- 58
               +    +  +A  +T+PLDT KV  Q+   S   + +       G L          
Sbjct: 2   TVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTE 61

Query: 59  ---GLYSGLGWSTLGRSFSMGARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEA 115
               LY+GL      +      R G+Y+ +  FY  G E   +     L+AG   GA   
Sbjct: 62  GPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGSR--LLAGSTTGALAV 119

Query: 116 LISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHGYTPDLKALSHSAGLLSI 175
            ++ P +++K        +R Q                R                     
Sbjct: 120 AVAQPTDVVK--------VRFQAQARAGG--------GR--------------------- 142

Query: 176 LTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVF 235
              ++   + A                         I   EG    W+G    V R+++ 
Sbjct: 143 ---RYQSTVEAY----------------------KTIAREEGIRGLWKGTSPNVARNAIV 177

Query: 236 GGIFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGF-SGAVAAAASHCF 294
                 ++  +   +L    +                 L     + F +G      +   
Sbjct: 178 NCAELVTYDLIKDTLLKANLMT--------------DDLPCHFTSAFGAGFCTTVIASPV 223

Query: 295 DTAKNRSQ 302
           D  K R  
Sbjct: 224 DVVKTRYM 231


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query308
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=5.1e-44  Score=319.04  Aligned_cols=226  Identities=17%  Similarity=0.231  Sum_probs=191.8

Q ss_pred             chhhHHHHHHHhHHhHhHhhhcCcHHHHHHHHhhCCC------CCCcCCHHHHHHHhhccc---ccccCchhHhhhHHhh
Q 038347            4 DNLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSG------SNKQLSSLQVLNRLGSLS---GLYSGLGWSTLGRSFS   74 (308)
Q Consensus         4 ~~~~~~~~~aG~~a~~~~~~~~~Pld~iK~r~Q~~~~------~~~~~~~~~~~~~i~~~~---gly~G~~~~~~~~~~~   74 (308)
                      ..+.+.++++|++||+++.++++|||+||+|+|++..      ...++++++++++|+++|   +||||+.+++++.++.
T Consensus         4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~   83 (297)
T 1okc_A            4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   83 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence            3567899999999999999999999999999999863      235789999999999988   8999999999999999


Q ss_pred             hhhHHHHHHHHHHHhhcC-CCCCc--chHHHHHHHHhHHHHHHHHhhChHHHHHHHHhhccccccccccchhhhhhhhhh
Q 038347           75 MGARFGVYEILSAFYKDG-REDNY--VYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPV  151 (308)
Q Consensus        75 ~~~~f~~y~~~k~~~~~~-~~~~~--~~~~~~~~ag~~ag~~~~~v~~P~e~vk~r~q~~~~~~~~~~~~~~~~~~~~~~  151 (308)
                      .+++|++||.+|+.+... .....  ......+++|++||+++.++++|+|+||+|||++.....               
T Consensus        84 ~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~---------------  148 (297)
T 1okc_A           84 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGA---------------  148 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSST---------------
T ss_pred             HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCC---------------
Confidence            999999999999954332 11111  235678899999999999999999999999999753210               


Q ss_pred             HHHhhcccccchhhhhhhhhhhhhhcccchhhhHhhhhccccccCCCCCCCccccccchhhhhhcccchhccccccchhh
Q 038347          152 IRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVR  231 (308)
Q Consensus       152 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~g~y~G~~~~~lr  231 (308)
                                              ....|+++.+++                      ++|+++||++|||||+.++++|
T Consensus       149 ------------------------~~~~~~~~~~~~----------------------~~i~~~eG~~glyrG~~~~l~~  182 (297)
T 1okc_A          149 ------------------------AQREFTGLGNCI----------------------TKIFKSDGLRGLYQGFNVSVQG  182 (297)
T ss_dssp             ------------------------TTCSCSSHHHHH----------------------HHHHHHHCHHHHTTTHHHHHHH
T ss_pred             ------------------------cCcCCCCHHHHH----------------------HHHHHhccHHHhcCCchHHHHH
Confidence                                    012566777766                      6999999999999999999999


Q ss_pred             hcccchhHHHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCCChHHHHHHHhHHHHhhhhhhchHHHHhhhhcccc
Q 038347          232 DSVFGGIFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGFSGAVAAAASHCFDTAKNRSQCIV  305 (308)
Q Consensus       232 ~~~~~~~~~~~ye~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lag~~a~~~t~P~Dvvktr~Q~~~  305 (308)
                      .+|+++++|.+||.+|+.+.+..               ..+....+++|++||++++++++|+||||+|||++.
T Consensus       183 ~~~~~~~~f~~ye~~k~~~~~~~---------------~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~  241 (297)
T 1okc_A          183 IIIYRAAYFGVYDTAKGMLPDPK---------------NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS  241 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCGGG---------------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHHhccCC---------------CccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcC
Confidence            99999999999999999663211               135677899999999999999999999999999875



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 308
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-08
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 51.6 bits (122), Expect = 3e-08
 Identities = 44/285 (15%), Positives = 82/285 (28%), Gaps = 49/285 (17%)

Query: 7   FASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRLGSLSGLYS---- 62
           F    +AG  + A++ +   P++ +K+L QV   S +  +  Q    +  +  +      
Sbjct: 6   FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGF 65

Query: 63  -----GLGWSTLGRSFSMGARFGVYEILSAFY---KDGREDNYVYVSEALMAGMVAGAAE 114
                G   + +    +    F   +     +    D  +  + Y +  L +G  AGA  
Sbjct: 66  LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATS 125

Query: 115 ALISSPFELMKVR--AQVSSVIRVQTSTSVAEHVTVAPVIRRLLHGYTP----------- 161
                P +  + R  A V      +  T +   +T       L   Y             
Sbjct: 126 LCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIY 185

Query: 162 -------------------DLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPL 202
                              ++  +       ++                 MM  SGR   
Sbjct: 186 RAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGA 245

Query: 203 VSSVRRPSD----IVSFEGWGAFWRGLRSGVVRDSVFGGIFFSSW 243
                   D    I   EG  AF++G  S V+R  + G      +
Sbjct: 246 DIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR-GMGGAFVLVLY 289


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query308
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=3.1e-40  Score=291.38  Aligned_cols=227  Identities=17%  Similarity=0.229  Sum_probs=195.4

Q ss_pred             chhhHHHHHHHhHHhHhHhhhcCcHHHHHHHHhhCCCC------CCcCCHHHHHHHhhccc---ccccCchhHhhhHHhh
Q 038347            4 DNLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSGS------NKQLSSLQVLNRLGSLS---GLYSGLGWSTLGRSFS   74 (308)
Q Consensus         4 ~~~~~~~~~aG~~a~~~~~~~~~Pld~iK~r~Q~~~~~------~~~~~~~~~~~~i~~~~---gly~G~~~~~~~~~~~   74 (308)
                      ..++++++++|++||+++.+++||||+||+|+|++...      ..++++++++++++++|   +||+|+.+.+++..+.
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   82 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   82 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence            46889999999999999999999999999999998642      35789999999999988   8999999999999999


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCC---cchHHHHHHHHhHHHHHHHHhhChHHHHHHHHhhccccccccccchhhhhhhhhh
Q 038347           75 MGARFGVYEILSAFYKDGREDN---YVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPV  151 (308)
Q Consensus        75 ~~~~f~~y~~~k~~~~~~~~~~---~~~~~~~~~ag~~ag~~~~~v~~P~e~vk~r~q~~~~~~~~~~~~~~~~~~~~~~  151 (308)
                      ..++|.+||.+++.+.+.....   .......+++|++||+++.++++|+|++|+|||.+.....               
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~---------------  147 (292)
T d1okca_          83 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGA---------------  147 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSST---------------
T ss_pred             cchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccc---------------
Confidence            9999999999999887643222   2345667889999999999999999999999999875431               


Q ss_pred             HHHhhcccccchhhhhhhhhhhhhhcccchhhhHhhhhccccccCCCCCCCccccccchhhhhhcccchhccccccchhh
Q 038347          152 IRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVR  231 (308)
Q Consensus       152 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~g~y~G~~~~~lr  231 (308)
                                              ....|.+..+++                      +.++++||+++||+|+.++++|
T Consensus       148 ------------------------~~~~~~~~~~~~----------------------~~~~~~~G~~~l~~G~~~~~~~  181 (292)
T d1okca_         148 ------------------------AQREFTGLGNCI----------------------TKIFKSDGLRGLYQGFNVSVQG  181 (292)
T ss_dssp             ------------------------TTCSCSSHHHHH----------------------HHHHHHHCHHHHTTTHHHHHHH
T ss_pred             ------------------------cccccccHHHHH----------------------HHhhhccchhhhhccccccccc
Confidence                                    122455666655                      6999999999999999999999


Q ss_pred             hcccchhHHHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCCChHHHHHHHhHHHHhhhhhhchHHHHhhhhccccC
Q 038347          232 DSVFGGIFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGFSGAVAAAASHCFDTAKNRSQCIVL  306 (308)
Q Consensus       232 ~~~~~~~~~~~ye~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lag~~a~~~t~P~Dvvktr~Q~~~~  306 (308)
                      .+|+++++|..||.+|+.+.+.               ........++++.+++.++++++||+||||+|||.|..
T Consensus       182 ~~~~~~~~~~~~~~~k~~~~~~---------------~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~  241 (292)
T d1okca_         182 IIIYRAAYFGVYDTAKGMLPDP---------------KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG  241 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCGG---------------GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             eehHhhhhhhhccchhhhcccc---------------cccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCC
Confidence            9999999999999999876432               12457889999999999999999999999999999864



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure