Citrus Sinensis ID: 038413
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 191 | 2.2.26 [Sep-21-2011] | |||||||
| Q15GI4 | 314 | Eugenol synthase 1 OS=Oci | N/A | no | 1.0 | 0.608 | 0.654 | 1e-69 | |
| Q15GI3 | 323 | Isoeugenol synthase 1 OS= | N/A | no | 0.989 | 0.585 | 0.592 | 3e-64 | |
| P52577 | 310 | Isoflavone reductase homo | yes | no | 0.984 | 0.606 | 0.482 | 2e-49 | |
| E1U332 | 308 | Isoflavone reductase-like | N/A | no | 0.989 | 0.613 | 0.479 | 1e-46 | |
| P52578 | 308 | Isoflavone reductase homo | N/A | no | 0.973 | 0.603 | 0.460 | 1e-44 | |
| P52579 | 310 | Isoflavone reductase homo | N/A | no | 0.989 | 0.609 | 0.442 | 5e-42 | |
| P52580 | 309 | Isoflavone reductase homo | N/A | no | 0.989 | 0.611 | 0.432 | 2e-39 | |
| P52581 | 312 | Isoflavone reductase homo | N/A | no | 0.958 | 0.586 | 0.432 | 3e-37 | |
| Q00016 | 318 | Isoflavone reductase OS=C | N/A | no | 0.968 | 0.581 | 0.394 | 9e-37 | |
| P52575 | 318 | Isoflavone reductase OS=M | N/A | no | 0.973 | 0.584 | 0.386 | 8e-36 |
| >sp|Q15GI4|EGS1_OCIBA Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 157/191 (82%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEK+V ++K+VDVVIS +A+PQ LDQ KI+ AIKVAGNIKRFLPS+FG EEDR+
Sbjct: 61 GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 120
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
LPPFEA +E+KR++RRAIE IPYT+VSANC+ +YF+N LLRP++P D++ VYG GEA
Sbjct: 121 ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEA 180
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
K NYE+DI TIKV DPR NR+VIYRP TNII+QLELIS WE+K G+ FK++H+
Sbjct: 181 KFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP 240
Query: 181 EEELVKLSQIL 191
EEE+V L++ L
Sbjct: 241 EEEIVALTKEL 251
|
Catalyzes the synthesis of the phenylpropene eugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Eugenol is a characteristic aromatic constituent of spices. Ocimum basilicum (taxid: 39350) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 1EC: 8 |
| >sp|Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (623), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 148/189 (78%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GEL EH+K+V++ KEVD+VIST+A PQ+L+QLK++ AIK AGNIKRF+PSEFG E DRVR
Sbjct: 64 GELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVR 123
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
LP F+A L+ K+ +RRA EA IP+TFVSAN AYFV+ LL P + + V +YG+G+A
Sbjct: 124 ALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKSEQVTIYGSGDA 183
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
KAV NYEED+A TIK +DPR NR++I +P NI+SQL+L+S WE+ TG + K HIS
Sbjct: 184 KAVLNYEEDVAAYTIKAADDPRAANRVLIIKPPKNIVSQLDLVSSWEKTTGSTLKMTHIS 243
Query: 181 EEELVKLSQ 189
E+E++KLS+
Sbjct: 244 EQEIIKLSE 252
|
Catalyzes the synthesis of the phenylpropene isoeugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Isoeugenol is a characteristic aromatic constituent of spices. Petunia hybrida (taxid: 4102) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 1 EC: 9 |
| >sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 131/195 (67%), Gaps = 7/195 (3%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G+L++HE +V +K+VDVVISTV Q LDQ KI+ AIK AGN+KRFLPSEFG + DR
Sbjct: 63 GDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRTS 122
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE------PHDDVVV 114
+ P ++ K +RR IEA IPYT+ C+G Y++ L++ FE P D V +
Sbjct: 123 AVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQ-FEPGLTSPPRDKVTI 181
Query: 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174
G+G AKAV N EEDIA TIK ++DPRT N+I+ +P N +S E+++LWE+K G+S
Sbjct: 182 LGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKSL 241
Query: 175 KRVHISEEELVKLSQ 189
++ H+ EE+L+K Q
Sbjct: 242 EKTHLPEEQLLKSIQ 256
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 131/192 (68%), Gaps = 3/192 (1%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G+L +HE +V +K+VDVVISTV Q DQ+KI+ AIK AGN+KRF PS+FG + DR
Sbjct: 62 GDLYDHESLVKAIKQVDVVISTVGQLQLADQVKIIAAIKEAGNVKRFFPSDFGTDVDRCH 121
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRP---FEPHDDVVVYGN 117
+ P ++ E K +RRAIEA IPYTFVSAN + Y + L++P P D V++ G+
Sbjct: 122 AVEPAKSSFEIKSQIRRAIEAEGIPYTFVSANYFAGYSLPTLVQPEVTAPPRDKVIILGD 181
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
G AKAVFN E DI TIK ++D RT N+I+ +P NI S EL++LWE+K G++ +++
Sbjct: 182 GNAKAVFNEENDIGTYTIKAVDDARTLNKILYIKPPKNIYSFNELVALWEKKIGKTLEKI 241
Query: 178 HISEEELVKLSQ 189
++ EE+++K Q
Sbjct: 242 YVPEEQVLKQIQ 253
|
Olea europaea (taxid: 4146) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 129/189 (68%), Gaps = 3/189 (1%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G+L +HE +V +K+VDVVISTV + DQ+K++ AIK AGN+KRF PSEFG + DRV
Sbjct: 62 GDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRVH 121
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE---PHDDVVVYGN 117
+ P +A K +RR +EA IP+T+V+ + Y + L +P P+D VV+ G+
Sbjct: 122 AVEPAKAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILGH 181
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
G KAVFN EEDI TI ++DP+T N+I+ +P NII+ EL+SLWE+KTG++ +R+
Sbjct: 182 GNTKAVFNKEEDIGTYTINAVDDPKTLNKILYIKPPHNIITLNELVSLWEKKTGKNLERL 241
Query: 178 HISEEELVK 186
++ EE+++K
Sbjct: 242 YVPEEQVLK 250
|
Solanum tuberosum (taxid: 4113) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 170 bits (431), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 126/192 (65%), Gaps = 3/192 (1%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G++ E ++ +K+VDVVISTV QF DQ+ I+ AIK AGNIKRFLPSEFG + D R
Sbjct: 64 GDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHAR 123
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYF---VNVLLRPFEPHDDVVVYGN 117
+ P + K +RR IEA IPYT+V N + +F + L P D VV++G+
Sbjct: 124 AIEPAASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGD 183
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
G KA++ EEDIA TI+ ++DPRT N+ + RP NI+S E++SLWE K G++ +++
Sbjct: 184 GNPKAIYVKEEDIATYTIEAVDDPRTLNKTLHMRPPANILSFNEIVSLWEDKIGKTLEKL 243
Query: 178 HISEEELVKLSQ 189
++SEE+++++ Q
Sbjct: 244 YLSEEDILQIVQ 255
|
Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1 | Back alignment and function description |
|---|
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 118/192 (61%), Gaps = 3/192 (1%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G+L + +VS +K DVVIS + Q DQ ++V AIK AGN+KRF PSEFG + DR
Sbjct: 63 GDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTG 122
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYF---VNVLLRPFEPHDDVVVYGN 117
+ P ++ L K +RRA EA IPYT+ A + + V +L P P D VV G+
Sbjct: 123 IVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGD 182
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
G+ KAVF E DIA T+ +DPR N+++ +P N +S EL+SLWE+KTG++F+R
Sbjct: 183 GDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRRE 242
Query: 178 HISEEELVKLSQ 189
++ EE ++K Q
Sbjct: 243 YVPEEAVLKQIQ 254
|
Zea mays (taxid: 4577) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52581|IFRH_LUPAL Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 117/192 (60%), Gaps = 9/192 (4%)
Query: 3 LDEHEKIVSILKEVDVVISTVAYPQF-----LDQLKIVHAIKVAGNIKRFLPSEFGCEED 57
+H+ +V +K VDVVI T++ F L QLK+V AIK AGNIKRFLPSEFG +
Sbjct: 63 FSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLTQLKLVEAIKDAGNIKRFLPSEFGMDPA 122
Query: 58 RV-RPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRP---FEPHDDVV 113
+ L P ++K VR+AIE IP+T++SANC+ YF L + P D V+
Sbjct: 123 LMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVL 182
Query: 114 VYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173
+YG+G K V+ E+D+A TIK I+DPRT N+ V RP NI++ ELI WE+ G+
Sbjct: 183 LYGDGNVKPVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTHKELIEKWEELIGKQ 242
Query: 174 FKRVHISEEELV 185
++ ISE++ +
Sbjct: 243 LEKNSISEKDFL 254
|
Lupinus albus (taxid: 3870) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q00016|IFR_CICAR Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (385), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 119/190 (62%), Gaps = 5/190 (2%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G++++HE +V +K+VD VI T LDQ+KI+ AIK AGN+KRF PSEFG + DR
Sbjct: 73 GDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLDVDRHD 132
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE----PHDDVVVYG 116
+ P ++K +RR +EA +PYT++ + + YF+ L + F+ P D V++ G
Sbjct: 133 AVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQ-FDATEPPRDKVIILG 191
Query: 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176
+G K + E D+ TI+ NDPRT N+ V R N ++ E++SLWE+K G++ ++
Sbjct: 192 DGNVKGAYVTEADVGTYTIRAANDPRTLNKAVHIRLPHNYLTSNEVVSLWEKKIGKTLEK 251
Query: 177 VHISEEELVK 186
+ISEE+++K
Sbjct: 252 SYISEEKVLK 261
|
Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. Cicer arietinum (taxid: 3827) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 5 |
| >sp|P52575|IFR_MEDSA Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (377), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 116/189 (61%), Gaps = 3/189 (1%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G++++HE +V +K+VD+VI DQ+KI+ AIK AGN+K+F PSEFG + DR
Sbjct: 73 GDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHE 132
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLR---PFEPHDDVVVYGN 117
+ P E+K +RR IEA +PYT++ + + YF+ L + P D VV+ G+
Sbjct: 133 AVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDTTDPPRDKVVILGD 192
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
G K + E D+ TI+ NDP T N+ V R N ++Q E+I+LWE+K G++ ++
Sbjct: 193 GNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPENYLTQNEVIALWEKKIGKTLEKT 252
Query: 178 HISEEELVK 186
++SEE+++K
Sbjct: 253 YVSEEQVLK 261
|
Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (-)-medicarpin, the major phytoalexin in Alfalfa. Medicago sativa (taxid: 3879) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 191 | ||||||
| 2706515 | 320 | isoflavone reductase-like protein [Citru | 1.0 | 0.596 | 0.905 | 9e-94 | |
| 224145043 | 318 | phenylcoumaran benzylic ether reductase | 1.0 | 0.600 | 0.732 | 9e-80 | |
| 118488749 | 318 | unknown [Populus trichocarpa] | 1.0 | 0.600 | 0.738 | 2e-79 | |
| 224136057 | 318 | phenylcoumaran benzylic ether reductase | 1.0 | 0.600 | 0.732 | 2e-79 | |
| 224154451 | 252 | predicted protein [Populus trichocarpa] | 0.989 | 0.75 | 0.740 | 5e-79 | |
| 359475549 | 319 | PREDICTED: eugenol synthase 1-like [Viti | 1.0 | 0.598 | 0.718 | 2e-74 | |
| 359475547 | 319 | PREDICTED: eugenol synthase 1-like [Viti | 1.0 | 0.598 | 0.718 | 3e-74 | |
| 297736427 | 281 | unnamed protein product [Vitis vinifera] | 1.0 | 0.679 | 0.718 | 3e-74 | |
| 297736423 | 281 | unnamed protein product [Vitis vinifera] | 1.0 | 0.679 | 0.718 | 3e-74 | |
| 76559888 | 319 | TPA: isoflavone reductase-like protein 2 | 1.0 | 0.598 | 0.713 | 1e-73 |
| >gi|2706515|emb|CAA73220.1| isoflavone reductase-like protein [Citrus x paradisi] | Back alignment and taxonomy information |
|---|
Score = 348 bits (892), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 173/191 (90%), Positives = 179/191 (93%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEKIVSILKEVDVVISTV YPQ LDQLKIVHAIKVAGNIKRFLPS+F CEEDRVR
Sbjct: 66 GELDEHEKIVSILKEVDVVISTVTYPQCLDQLKIVHAIKVAGNIKRFLPSDFECEEDRVR 125
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
PLPPFEA LEKKRIVRRAIEA +IPYTFVSAN GAYFVNVLLRP E HDDVVVYG+GEA
Sbjct: 126 PLPPFEACLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLRPSESHDDVVVYGSGEA 185
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQ +IISQLELISLWEQKTG SFKRVH+S
Sbjct: 186 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQASIISQLELISLWEQKTGWSFKRVHVS 245
Query: 181 EEELVKLSQIL 191
EEELVKLS+ L
Sbjct: 246 EEELVKLSETL 256
|
Source: Citrus x paradisi Species: Citrus x paradisi Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224145043|ref|XP_002336195.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] gi|222832409|gb|EEE70886.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 140/191 (73%), Positives = 165/191 (86%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GE DE EK+VS+L++VDVVISTVAYPQ LDQLKI+ AIKVAGNIKRF PS+FG EEDRV
Sbjct: 64 GEFDEQEKLVSVLRDVDVVISTVAYPQVLDQLKIIEAIKVAGNIKRFFPSDFGVEEDRVT 123
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
PLPPFEA+L+KKR +RRA E IPYTFVSANC+GAYFVNVLLRP E D+ VYG+GEA
Sbjct: 124 PLPPFEAFLDKKRKIRRATEEAGIPYTFVSANCFGAYFVNVLLRPHEQPQDISVYGSGEA 183
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
KAV NYEEDIA TIK+ +DP TCNR+VIYRPQ NI+SQLELISLWE+KTG++F R+++
Sbjct: 184 KAVMNYEEDIAMYTIKIADDPETCNRVVIYRPQKNIVSQLELISLWEKKTGKTFNRIYVP 243
Query: 181 EEELVKLSQIL 191
E+E+VKLS+ L
Sbjct: 244 EDEIVKLSETL 254
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118488749|gb|ABK96185.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/191 (73%), Positives = 164/191 (85%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GE DE EKIVS+L+ VDVVISTVAYPQ LDQLKI+ AIKVAGNIKRF PS+FG EEDRV
Sbjct: 64 GEFDEQEKIVSVLRHVDVVISTVAYPQVLDQLKIIEAIKVAGNIKRFFPSDFGVEEDRVT 123
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
PLPPFEA+L+KKR +RRA E IPYTFVSANC+GAYFVNVLLRP E D+ VYG+GEA
Sbjct: 124 PLPPFEAFLDKKRKIRRATEEAGIPYTFVSANCFGAYFVNVLLRPHEQPQDIPVYGSGEA 183
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
KAV NYEEDIA TIK+ +DP TCNR+VIYRPQ NI+SQLELISLWE+KTG++F R+++
Sbjct: 184 KAVMNYEEDIAMYTIKMADDPETCNRVVIYRPQKNIVSQLELISLWEKKTGKTFNRIYVP 243
Query: 181 EEELVKLSQIL 191
E+E+VKLS+ L
Sbjct: 244 EDEIVKLSETL 254
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224136057|ref|XP_002327370.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] gi|222835740|gb|EEE74175.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 140/191 (73%), Positives = 164/191 (85%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GE DE EK+VS+L+ VDVVISTVAYPQ LDQLKI+ AIKVAGNIKRF PS+FG EEDRV
Sbjct: 64 GEFDEQEKLVSVLRHVDVVISTVAYPQVLDQLKIIEAIKVAGNIKRFFPSDFGVEEDRVT 123
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
PLPPFEA+L+KKR +RRA E IPYTFVSANC+GAYFVNVLLRP E D+ VYG+GEA
Sbjct: 124 PLPPFEAFLDKKRKIRRATEEAGIPYTFVSANCFGAYFVNVLLRPHEQPQDISVYGSGEA 183
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
KAV NYEEDIA TIK+ +DP TCNR+VIYRPQ NI+SQLELISLWE+KTG++F R+++
Sbjct: 184 KAVMNYEEDIAMYTIKIADDPETCNRVVIYRPQKNIVSQLELISLWEKKTGKTFNRIYVP 243
Query: 181 EEELVKLSQIL 191
E+E+VKLS+ L
Sbjct: 244 EDEIVKLSETL 254
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224154451|ref|XP_002337478.1| predicted protein [Populus trichocarpa] gi|222839435|gb|EEE77772.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 140/189 (74%), Positives = 163/189 (86%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GE DE EKIVS+L+ VDVVISTVAYPQ LDQLKI+ AIKVAGNIKRF PS+FG EEDRV
Sbjct: 64 GEFDEQEKIVSVLRHVDVVISTVAYPQVLDQLKIIEAIKVAGNIKRFFPSDFGVEEDRVT 123
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
PLPPFEA+L+KKR +RRA E IPYTFVSANC+GAYFVNVLLRP E D+ VYG+GEA
Sbjct: 124 PLPPFEAFLDKKRKIRRATEEAGIPYTFVSANCFGAYFVNVLLRPHEQPQDIPVYGSGEA 183
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
KAV NYEEDIA TIK+ +DP TCNR+VIYRPQ NI+SQLELISLWE+KTG++F R+++
Sbjct: 184 KAVMNYEEDIAMYTIKMADDPETCNRVVIYRPQKNIVSQLELISLWEKKTGKTFNRIYVP 243
Query: 181 EEELVKLSQ 189
E+E+VKLS+
Sbjct: 244 EDEIVKLSE 252
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475549|ref|XP_003631700.1| PREDICTED: eugenol synthase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/192 (71%), Positives = 162/192 (84%), Gaps = 1/192 (0%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEK+VS++++VDVVIS +AYPQ LDQLKI+ AIKVAG KRFLPS+FG EEDRV
Sbjct: 64 GELDEHEKLVSVIQQVDVVISALAYPQVLDQLKIIDAIKVAGTSKRFLPSDFGVEEDRVT 123
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGE 119
L PF+ +L+KKRI+RRAIEA I YTFVSA+C+GAYFVN LL P + +D + VYG+GE
Sbjct: 124 VLSPFQEFLDKKRIIRRAIEAAGISYTFVSASCFGAYFVNYLLHPHDYSNDSITVYGSGE 183
Query: 120 AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179
A+AV NYEEDIA TIKV NDP CNRIVI+ P NIISQLELI+LWE+KTGRSFKRVH+
Sbjct: 184 AQAVLNYEEDIALYTIKVANDPTACNRIVIFLPPKNIISQLELIALWEKKTGRSFKRVHV 243
Query: 180 SEEELVKLSQIL 191
SEEELVKLS+ L
Sbjct: 244 SEEELVKLSETL 255
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475547|ref|XP_003631699.1| PREDICTED: eugenol synthase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/192 (71%), Positives = 160/192 (83%), Gaps = 1/192 (0%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEK+V ++++VDVVI +AYPQ LDQLKI+ AI VAG KRFLPS+FG EEDRV
Sbjct: 64 GELDEHEKLVWVIQQVDVVILALAYPQVLDQLKIIDAINVAGTTKRFLPSDFGVEEDRVT 123
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGE 119
LPPF+ L+KKRI+RRAIEA I YTFVSANC+GAYFVN LL P + +D + VYG+GE
Sbjct: 124 VLPPFQEVLDKKRIIRRAIEAAGISYTFVSANCFGAYFVNYLLHPHDHSNDSITVYGSGE 183
Query: 120 AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179
AKAV NYEEDIA TIKV NDP CNRIVI+RP NIISQLELI+LWE+KTGRSFKRVH+
Sbjct: 184 AKAVLNYEEDIALYTIKVANDPTACNRIVIFRPPKNIISQLELIALWEKKTGRSFKRVHV 243
Query: 180 SEEELVKLSQIL 191
SEEE+VKLS+ L
Sbjct: 244 SEEEVVKLSETL 255
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736427|emb|CBI25150.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/192 (71%), Positives = 162/192 (84%), Gaps = 1/192 (0%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEK+VS++++VDVVIS +AYPQ LDQLKI+ AIKVAG KRFLPS+FG EEDRV
Sbjct: 26 GELDEHEKLVSVIQQVDVVISALAYPQVLDQLKIIDAIKVAGTSKRFLPSDFGVEEDRVT 85
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGE 119
L PF+ +L+KKRI+RRAIEA I YTFVSA+C+GAYFVN LL P + +D + VYG+GE
Sbjct: 86 VLSPFQEFLDKKRIIRRAIEAAGISYTFVSASCFGAYFVNYLLHPHDYSNDSITVYGSGE 145
Query: 120 AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179
A+AV NYEEDIA TIKV NDP CNRIVI+ P NIISQLELI+LWE+KTGRSFKRVH+
Sbjct: 146 AQAVLNYEEDIALYTIKVANDPTACNRIVIFLPPKNIISQLELIALWEKKTGRSFKRVHV 205
Query: 180 SEEELVKLSQIL 191
SEEELVKLS+ L
Sbjct: 206 SEEELVKLSETL 217
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736423|emb|CBI25146.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/192 (71%), Positives = 160/192 (83%), Gaps = 1/192 (0%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEK+V ++++VDVVI +AYPQ LDQLKI+ AI VAG KRFLPS+FG EEDRV
Sbjct: 26 GELDEHEKLVWVIQQVDVVILALAYPQVLDQLKIIDAINVAGTTKRFLPSDFGVEEDRVT 85
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGE 119
LPPF+ L+KKRI+RRAIEA I YTFVSANC+GAYFVN LL P + +D + VYG+GE
Sbjct: 86 VLPPFQEVLDKKRIIRRAIEAAGISYTFVSANCFGAYFVNYLLHPHDHSNDSITVYGSGE 145
Query: 120 AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179
AKAV NYEEDIA TIKV NDP CNRIVI+RP NIISQLELI+LWE+KTGRSFKRVH+
Sbjct: 146 AKAVLNYEEDIALYTIKVANDPTACNRIVIFRPPKNIISQLELIALWEKKTGRSFKRVHV 205
Query: 180 SEEELVKLSQIL 191
SEEE+VKLS+ L
Sbjct: 206 SEEEVVKLSETL 217
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|76559888|tpe|CAI56331.1| TPA: isoflavone reductase-like protein 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/192 (71%), Positives = 162/192 (84%), Gaps = 1/192 (0%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEK+VS++++VDVVIS +AYPQ LDQLKI+ AIKVAG KRFLPS+FG EEDRV
Sbjct: 64 GELDEHEKLVSVIQQVDVVISALAYPQVLDQLKIIDAIKVAGTSKRFLPSDFGVEEDRVT 123
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGE 119
L PF+ +L+KKRI+RRAIEA I YTFVSA+C+GAYFVN LL P + +D + VYG+GE
Sbjct: 124 VLSPFQEFLDKKRIIRRAIEAAGISYTFVSASCFGAYFVNYLLHPHDYSNDSITVYGSGE 183
Query: 120 AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179
A+AV NYEEDIA TIKV NDP C+RIVI+ P NIISQLELI+LWE+KTGRSFKRVH+
Sbjct: 184 AQAVLNYEEDIALHTIKVANDPTPCDRIVIFLPPKNIISQLELIALWEKKTGRSFKRVHV 243
Query: 180 SEEELVKLSQIL 191
SEEELVKLS+ L
Sbjct: 244 SEEELVKLSETL 255
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 191 | ||||||
| TAIR|locus:2025192 | 310 | AT1G75280 [Arabidopsis thalian | 0.984 | 0.606 | 0.482 | 2.7e-45 | |
| TAIR|locus:2025167 | 322 | AT1G75300 [Arabidopsis thalian | 0.607 | 0.360 | 0.447 | 7.6e-44 | |
| TAIR|locus:2136383 | 308 | AT4G39230 [Arabidopsis thalian | 0.968 | 0.600 | 0.489 | 1.5e-42 | |
| TAIR|locus:2025197 | 318 | AT1G75290 [Arabidopsis thalian | 0.989 | 0.594 | 0.453 | 1.4e-41 | |
| TAIR|locus:2031730 | 317 | PRR1 "pinoresinol reductase 1" | 0.994 | 0.599 | 0.44 | 7.8e-39 | |
| TAIR|locus:2016482 | 310 | AT1G19540 [Arabidopsis thalian | 0.989 | 0.609 | 0.438 | 1.6e-38 | |
| TAIR|locus:2119455 | 317 | PRR2 "pinoresinol reductase 2" | 0.968 | 0.583 | 0.402 | 5.1e-35 | |
| TAIR|locus:2139494 | 306 | AT4G34540 [Arabidopsis thalian | 0.973 | 0.607 | 0.359 | 7.1e-29 | |
| ASPGD|ASPL0000072559 | 359 | AN8815 [Emericella nidulans (t | 0.874 | 0.465 | 0.291 | 4.5e-11 | |
| UNIPROTKB|G4MWE1 | 332 | MGG_08352 "Isoflavone reductas | 0.884 | 0.509 | 0.242 | 3.5e-09 |
| TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 94/195 (48%), Positives = 131/195 (67%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G+L++HE +V +K+VDVVISTV Q LDQ KI+ AIK AGN+KRFLPSEFG + DR
Sbjct: 63 GDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRTS 122
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEP------HDDVVV 114
+ P ++ K +RR IEA IPYT+ C+G Y++ L++ FEP D V +
Sbjct: 123 AVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQ-FEPGLTSPPRDKVTI 181
Query: 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174
G+G AKAV N EEDIA TIK ++DPRT N+I+ +P N +S E+++LWE+K G+S
Sbjct: 182 LGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKSL 241
Query: 175 KRVHISEEELVKLSQ 189
++ H+ EE+L+K Q
Sbjct: 242 EKTHLPEEQLLKSIQ 256
|
|
| TAIR|locus:2025167 AT1G75300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 272 (100.8 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 55/123 (44%), Positives = 82/123 (66%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G+L++HE +V +K+VDVVIST+ + Q DQ KI+ AIK AGN+KRFLP+EFG + +R
Sbjct: 63 GDLNDHESLVKAIKQVDVVISTIGHKQIFDQTKIISAIKEAGNVKRFLPAEFGIDVERTS 122
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEP----H--DDVVV 114
+ P ++ K +RRAIEA IPYT+V +NC +++ LL+ FE H D ++
Sbjct: 123 AVEPAKSLFAGKVQIRRAIEAEGIPYTYVVSNCSAGFYLRTLLQ-FESGLISHTRDKAII 181
Query: 115 YGN 117
+G+
Sbjct: 182 FGD 184
|
|
| TAIR|locus:2136383 AT4G39230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 93/190 (48%), Positives = 126/190 (66%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G+LD+H +V+ +K+ DVVISTV + Q KI+ AIK AGN+KRF PSEFG + DRV
Sbjct: 62 GDLDDHTSLVNSIKQADVVISTVGHSLLGHQYKIISAIKEAGNVKRFFPSEFGNDVDRVF 121
Query: 61 PLPPFE-AYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRP---FEPHDDVVVYG 116
+ P + AY K +I RR IEA IPYT+VS N + YF+ L +P P D V+V G
Sbjct: 122 TVEPAKSAYATKAKI-RRTIEAEGIPYTYVSCNFFAGYFLPTLAQPGATSAPRDKVIVLG 180
Query: 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176
+G KAVFN EEDI TI ++DPRT N+I+ RP N S +L+SLWE K G++ +R
Sbjct: 181 DGNPKAVFNKEEDIGTYTINAVDDPRTLNKILYIRPPMNTYSFNDLVSLWENKIGKTLER 240
Query: 177 VHISEEELVK 186
+++ EE+L+K
Sbjct: 241 IYVPEEQLLK 250
|
|
| TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 88/194 (45%), Positives = 127/194 (65%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G+L++HE +V +K+ DVVISTV Q LDQ KI+ AIK AGN+KRFLPSEFG + D+
Sbjct: 63 GDLNDHESLVKAIKQADVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGMDVDKSS 122
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVL--LRP---FEPHDDVVVY 115
+ P ++ +K RR IEA IPYT++ N + Y++ L L P P D V ++
Sbjct: 123 AVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAGYYLPTLVQLEPGLTSPPRDKVKIF 182
Query: 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK 175
G+G KAV N EEDIA TIK ++DPRT N+ + P N +S E+++LWE+K G+S +
Sbjct: 183 GDGNVKAVINKEEDIAAYTIKAVDDPRTLNKTLYINPPNNTLSMNEIVTLWEKKIGKSVE 242
Query: 176 RVHISEEELVKLSQ 189
++++SEE++ K Q
Sbjct: 243 KIYMSEEQIFKSIQ 256
|
|
| TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 88/200 (44%), Positives = 128/200 (64%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQF-----LDQLKIVHAIKVAGNIKRFLPSEFGCE 55
G +H+ +VS +K VDVV+S ++ F L QLK+V AIK AGN+KRFLPSEFG +
Sbjct: 67 GSFSDHQSLVSAVKLVDVVVSAMSGVHFRSHNILVQLKLVEAIKEAGNVKRFLPSEFGMD 126
Query: 56 EDRV-RPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFV-NV--LLRPFEPHDD 111
R+ LPP ++K VR+AIEA IPYT+V C+ AYF N+ ++ P +
Sbjct: 127 PPRMGHALPPGRETFDQKMEVRQAIEAAGIPYTYVVGACFAAYFAGNLSQMVTLLPPKEK 186
Query: 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171
V +YG+G K VF E+DIAK T K +NDPRT N+ V RP N+++QLEL+ +WE+ TG
Sbjct: 187 VNIYGDGNVKVVFADEDDIAKYTAKTLNDPRTLNKTVNIRPPDNVLTQLELVQIWEKLTG 246
Query: 172 RSFKRVHISEEE-LVKLSQI 190
+ ++ +I+ ++ L + Q+
Sbjct: 247 KELEKTNIAAQDFLANIEQM 266
|
|
| TAIR|locus:2016482 AT1G19540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 86/196 (43%), Positives = 122/196 (62%)
Query: 1 GELDEHEKIVSILKEVDVVISTVA--YPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDR 58
G L + E +V +K+VDVVIS V + L+Q I+ AIK +GN+KRFLPSEFG + DR
Sbjct: 60 GSLSDKESLVKAIKQVDVVISAVGRFQTEILNQTNIIDAIKESGNVKRFLPSEFGNDVDR 119
Query: 59 VRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVL----LR-PFEPHDDVV 113
+ P + K +RRAIEA +IPYT+V + C+ FV L LR P D V
Sbjct: 120 TVAIEPTLSEFITKAQIRRAIEAAKIPYTYVVSGCFAGLFVPCLGQCHLRLRSPPRDKVS 179
Query: 114 VYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173
+Y G KA+ N EEDI T+K ++DPRT N+I+ P I+SQ +++ LWE+K G++
Sbjct: 180 IYDTGNGKAIVNTEEDIVAYTLKAVDDPRTLNKILYIHPPNYIVSQNDMVGLWEEKIGKT 239
Query: 174 FKRVHISEEELVKLSQ 189
++ ++SEEEL+K Q
Sbjct: 240 LEKTYVSEEELLKTIQ 255
|
|
| TAIR|locus:2119455 PRR2 "pinoresinol reductase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 78/194 (40%), Positives = 120/194 (61%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLD-----QLKIVHAIKVAGNIKRFLPSEFGCE 55
G +H+ +VS +K+VDVV+S ++ F QLK+V AIK AGN+KRFLPSEFG +
Sbjct: 67 GSFSDHQSLVSAVKQVDVVVSAMSGVHFRTHNIPVQLKLVAAIKEAGNVKRFLPSEFGMD 126
Query: 56 EDRV-RPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRP---FEPHDD 111
R+ +PP ++K +R AI+A I +T++ C+ AYF L + F P +
Sbjct: 127 PSRMGHAMPPGSETFDQKMEIRNAIKAAGISHTYLVGACFAAYFGGNLSQMGTLFPPKNK 186
Query: 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171
V +YG+G K VF E+D+AK T K +NDPRT N+ V RP NI++Q+EL+ +WE+ T
Sbjct: 187 VDIYGDGNVKVVFVDEDDMAKYTAKTLNDPRTLNKTVYVRPTDNILTQMELVQIWEKLTE 246
Query: 172 RSFKRVHISEEELV 185
+ ++ ++S + +
Sbjct: 247 KELEKTYVSGNDFL 260
|
|
| TAIR|locus:2139494 AT4G34540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 68/189 (35%), Positives = 105/189 (55%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G L++ + + +VDVVIS + LDQ +V IK AG+IKRF+P+E+G D+ +
Sbjct: 60 GSLEDEGSLAEAVSKVDVVISAIPSKHVLDQKLLVRVIKQAGSIKRFIPAEYGANPDKTQ 119
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRP---FEPHDDVVVYGN 117
+ KK +R IE+ IPYT++ + + L++P P D V V+G+
Sbjct: 120 VSDLDHDFYSKKSEIRHMIESEGIPYTYICCGLFMRVLLPSLVQPGLQSPPTDKVTVFGD 179
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
G KAVF + D+A TIK I+DPRT N+ + P NI S +L+ LWE K + ++
Sbjct: 180 GNVKAVFVNDVDVAAFTIKTIDDPRTLNKTLYLSPPGNICSMNDLVELWEGKIEKKLEKT 239
Query: 178 HISEEELVK 186
+E +L+K
Sbjct: 240 FATENQLLK 248
|
|
| ASPGD|ASPL0000072559 AN8815 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 159 (61.0 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 53/182 (29%), Positives = 85/182 (46%)
Query: 7 EKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFE 66
E++ L ++DVVIS V + DQ+ I +A K AG +KRF+P C V P P
Sbjct: 65 EELEKALSDIDVVISCVGSAEQQDQIPIANAAKKAG-VKRFIP----CGFITVAP-PGGI 118
Query: 67 AYL-EKKRIVRRAIEAVEIPYTFVSAN-----CYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
+L ++K V I+ + +PYT + Y L ++ +V G+G
Sbjct: 119 MWLRDEKEAVYNHIKQLHLPYTIIDVGWWYQLAYPRLESGKLDYAMTTSNNEIV-GDGNT 177
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
DI + ++I D RT N++V +++Q E+ L E+ +G R +IS
Sbjct: 178 PLALTDLRDIGRYVARIITDDRTLNKMVF--AYNTVLTQNEIFGLLEEISGEQITRNYIS 235
Query: 181 EE 182
EE
Sbjct: 236 EE 237
|
|
| UNIPROTKB|G4MWE1 MGG_08352 "Isoflavone reductase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 141 (54.7 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 47/194 (24%), Positives = 89/194 (45%)
Query: 3 LDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPL 62
L E++V++L+ D V++ + + F +Q +V A K AG +KR PS F V P
Sbjct: 69 LGPREELVNVLRGADAVVAPIDFDNFEEQKALVDACKEAG-VKRLTPSNFA----PVMPA 123
Query: 63 PPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE-P-----------HD 110
E K I+ +PYT + A++ L PF+ P +D
Sbjct: 124 YNVMGMRETKEATINYIKEQRVPYTIIDV----AWWYQNL--PFKIPSGRTDYMSEILND 177
Query: 111 DVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKT 170
D + G G+ F+ I +++ DPRT N+ V + +++ +++ E+ +
Sbjct: 178 DARIIGTGDVPIAFSNLRSIGTHVARILADPRTINKYVHIWDE--VLTMHQVVETLEEVS 235
Query: 171 GRSFKRVHISEEEL 184
G +RV+ +++++
Sbjct: 236 GEKVERVYNTQKDM 249
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 191 | |||
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 5e-64 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 7e-54 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 3e-05 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 1e-04 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 0.001 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 0.002 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 5e-64
Identities = 72/182 (39%), Positives = 98/182 (53%), Gaps = 9/182 (4%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAY---PQFLDQLKIVHAIKVAGNIKRFLPSEFGCEED 57
G+LD+HE +V LK VDVV S + + D K+ A K AG +K F+PSEFG + D
Sbjct: 50 GDLDDHESLVEALKGVDVVFSVTGFWLSKEIEDGKKLADAAKEAG-VKHFIPSEFGNDVD 108
Query: 58 RVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE---PHDDVVV 114
R + P + + K V R I A+ IPYTFV A + F++ L P + P D V +
Sbjct: 109 RSNGVEPAVPHFDSKAEVERYIRALGIPYTFVYAGFFMGNFLSNLAPPGDLAPPRDKVTL 168
Query: 115 YGNGEAKAVFN-YEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173
G G KAV EEDI IK+++DPR RP NI+S E+ LW +K G++
Sbjct: 169 LGPGNPKAVPLDDEEDIGTYVIKILDDPRKLK-GKYIRPPGNILSGNEIAELWSKKIGKT 227
Query: 174 FK 175
K
Sbjct: 228 VK 229
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 172 bits (438), Expect = 7e-54
Identities = 71/193 (36%), Positives = 109/193 (56%), Gaps = 8/193 (4%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
+ HE +V+ LK VD VIS + DQLK++ A AG +KRF+PSEFG + DR+
Sbjct: 51 VDYASHESLVAALKGVDAVISALGGAAIGDQLKLIDAAIAAG-VKRFIPSEFGVDYDRIG 109
Query: 61 PLPPFEAYLEKKRIVRRAIEA--VEIPYTFVSANCYGAYFVNVLLRPFEPHDD-VVVYGN 117
LP ++KR VRR + A +P+T+VS + Y + L + + +YG+
Sbjct: 110 ALPLL-DLFDEKRDVRRYLRAKNAGLPWTYVSTGMFLDYLLEPLFGVVDLANRTATIYGD 168
Query: 118 GEAKAVFNYEEDIAKCTIKVI-NDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176
GE K F EDI + + + + RT NR+V ++++Q ELI+L E+ TGR F+R
Sbjct: 169 GETKFAFTTLEDIGRAVARALTHPDRTLNRVVFVAG--DVVTQNELIALVERVTGRKFER 226
Query: 177 VHISEEELVKLSQ 189
++SEEEL++
Sbjct: 227 TYVSEEELLEELI 239
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 3e-05
Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 33/165 (20%)
Query: 1 GELDEHEKIVSILKEVDVVISTV-AYPQ---------FLDQLKIVHAIKVAGNIKRF-LP 49
G+L + E + + L+ +D VIS + + + + ++ A K AG +KRF L
Sbjct: 49 GDLTDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAG-VKRFVLV 107
Query: 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPH 109
S G + PL YL+ KR + A + YT V G
Sbjct: 108 SSIGAD-KPSHPLEALGPYLDAKRKAEDYLRASGLDYTIVRP---GGLT----------- 152
Query: 110 DD------VVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIV 148
DD VV+ G+G D+A+ + ++ P +
Sbjct: 153 DDPAGTGRVVLGGDGTRLDGPISRADVAEVLAEALDTPAAIGKTF 197
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 1e-04
Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 17/121 (14%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLD---------QLKIVHAIKVAGNIKRFLPSE 51
G+L + + + ++ VDVVI P+ ++ A K AG +K F+
Sbjct: 48 GDLRDLDSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAG-VKHFIFIS 106
Query: 52 FGCEEDRVRPL---PPFEAYLEKKRIVRRAIEAVEIPYTFVSANCY----GAYFVNVLLR 104
+ P YL K + +PYT V N ++
Sbjct: 107 SLGAYGDLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPGVIYGDLARAIANAVVT 166
Query: 105 P 105
P
Sbjct: 167 P 167
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 41/190 (21%), Positives = 73/190 (38%), Gaps = 18/190 (9%)
Query: 1 GELDEHEKIVSILKEVDVV--ISTVAYPQFLDQLKIVHAIKVAGNIKRFL-PSEFGCEED 57
G+ D+ E + + VD + IS + Q K +K + S G +ED
Sbjct: 48 GDYDDPETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDAAKQAGVKHIVYLSASGADED 107
Query: 58 RVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPH--DDVVVY 115
L EK +EA IPYT + +F++ LL + +
Sbjct: 108 SPFLLARDHGATEK------YLEASGIPYTILRPG----WFMDNLLEFLPSILEEGTIYG 157
Query: 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIV-IYRPQTNIISQLELISLWEQKTGRSF 174
G+ K F DIA+ + +P ++ + P+ +S EL ++ + G+
Sbjct: 158 PAGDGKVAFVDRRDIAEAAAAALTEPGHEGKVYNLTGPEA--LSYAELAAILSEALGKPV 215
Query: 175 KRVHISEEEL 184
+ V +S +E
Sbjct: 216 RYVPVSPDEA 225
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.002
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 22/143 (15%)
Query: 28 FLDQLKIVHAIKVAGNIKRFL----PSEFG-CEEDRVR---PLPPFEAYLEKK----RIV 75
L L+++ A + AG +KRF+ +G + + PL P Y K R+V
Sbjct: 91 VLGTLRLLEAARRAG-VKRFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLV 149
Query: 76 RRAIEAVEIPYTFV-SANCYGAY--------FVNVLLRPFEPHDDVVVYGNGEAKAVFNY 126
A + + N YG + L+R +++ G+G + F Y
Sbjct: 150 EAYARAYGLRAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLY 209
Query: 127 EEDIAKCTIKVINDPRTCNRIVI 149
+D+A+ + + P I
Sbjct: 210 VDDVARAILLALEHPDGGEIYNI 232
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 191 | |||
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.97 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.95 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.94 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.9 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.9 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.88 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.87 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.86 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.84 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.81 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.81 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.8 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.79 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.79 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.79 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.79 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.78 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.77 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.77 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.76 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.76 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.76 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.75 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.75 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.75 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.74 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.74 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.74 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.73 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.73 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.73 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.72 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.72 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.72 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.72 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.71 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.69 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.69 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.69 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.69 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.68 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.68 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.67 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.66 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.65 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.65 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.65 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.64 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.64 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.64 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.63 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.63 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.61 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.61 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.6 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.57 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.56 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.55 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.54 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.52 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.5 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.46 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.45 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.36 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.32 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.32 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.31 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.29 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.28 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.18 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.03 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 98.98 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.82 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.82 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 98.79 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.76 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 98.74 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.74 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.71 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 98.65 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.64 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.63 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.62 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 98.58 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.55 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.53 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.52 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 98.51 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.51 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.49 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.47 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.39 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.37 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 98.34 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.32 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 98.31 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 98.31 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.29 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.27 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 98.26 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.24 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 98.24 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.22 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.21 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 98.21 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.2 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.2 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.2 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 98.19 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 98.19 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.19 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.18 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.17 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 98.17 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.15 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.15 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.12 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.11 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.07 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.07 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.06 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.05 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 98.02 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.02 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 97.99 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 97.98 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 97.96 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 97.96 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 97.91 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 97.89 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.87 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 97.86 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 97.79 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 97.78 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.77 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 97.76 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 97.74 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 97.73 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 97.72 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 97.71 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 97.71 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.7 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.69 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 97.68 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 97.67 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 97.64 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 97.63 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.63 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 97.6 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 97.6 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.59 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 97.57 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.57 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 97.56 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 97.55 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 97.54 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.53 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 97.53 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.53 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.5 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 97.49 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.49 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 97.49 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 97.48 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 97.48 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 97.47 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 97.46 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.44 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 97.42 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 97.4 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.4 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.36 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.36 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 97.36 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.34 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.34 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 97.34 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.33 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 97.33 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.33 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.32 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 97.29 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 97.26 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.24 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 97.24 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 97.23 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 97.22 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.22 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.21 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.13 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.13 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 97.11 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 97.1 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 97.09 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 97.06 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 97.05 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.02 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 96.98 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 96.97 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 96.96 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 96.95 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.93 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 96.92 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 96.89 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 96.88 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 96.87 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 96.8 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 96.79 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 96.72 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 96.7 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 96.66 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 96.63 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 96.61 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.56 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 96.52 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 96.52 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.47 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 96.45 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 96.41 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 96.38 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 96.38 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 96.25 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 96.24 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 96.16 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.12 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 96.11 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 96.04 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 95.99 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 95.89 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 95.88 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.88 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 95.85 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 95.8 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 95.76 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 95.73 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 95.69 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.66 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 95.64 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 95.55 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 95.41 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 95.39 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.38 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.34 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.32 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 95.3 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 95.28 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.28 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 95.24 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 95.22 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.18 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 94.99 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.97 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 94.93 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 94.93 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 94.86 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 94.81 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 94.79 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 94.79 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.68 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 94.27 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 93.87 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 93.57 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 93.46 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 92.93 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 92.56 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 92.16 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 91.59 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 91.35 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 91.22 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 91.09 | |
| PLN00106 | 323 | malate dehydrogenase | 89.99 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 89.6 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 87.92 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 87.62 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 87.23 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 85.63 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 84.25 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 82.85 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 82.01 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 81.89 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 81.33 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 80.94 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 80.86 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 80.54 | |
| PLN00015 | 308 | protochlorophyllide reductase | 80.35 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 80.06 |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=191.68 Aligned_cols=175 Identities=23% Similarity=0.387 Sum_probs=143.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCC---CcccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHHHHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYP---QFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRR 77 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~---~~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k~~~e~ 77 (191)
+|+.|.++|.++|+|+|+||++.+.. ..+...++++||+++| |||||+|+++..........|..+++..|..+|+
T Consensus 50 ~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~ 128 (233)
T PF05368_consen 50 ADYDDPESLVAALKGVDAVFSVTPPSHPSELEQQKNLIDAAKAAG-VKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEE 128 (233)
T ss_dssp S-TT-HHHHHHHHTTCSEEEEESSCSCCCHHHHHHHHHHHHHHHT--SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHcCCceEEeecCcchhhhhhhhhhHHHhhhccc-cceEEEEEecccccccccccccchhhhhhhhhhh
Confidence 68999999999999999999999854 3677899999999999 9999999988766443333456678889999999
Q ss_pred HHHhcCCCeEEEecccccccccccccC---CCCCCceEEEecCCcceeeec-chhhHHHHHHHHhcCcccC--CceeEee
Q 038413 78 AIEAVEIPYTFVSANCYGAYFVNVLLR---PFEPHDDVVVYGNGEAKAVFN-YEEDIAKCTIKVINDPRTC--NRIVIYR 151 (191)
Q Consensus 78 ~l~~~~~~~tilrp~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i-~~~Dva~~~~~~l~~~~~~--~~~~~i~ 151 (191)
+|++++++||++|||.|++|+...+.. .......+.++++++.+..++ +.+|+|++++.++.+|... ++.+.++
T Consensus 129 ~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~ 208 (233)
T PF05368_consen 129 YLRESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLA 208 (233)
T ss_dssp HHHHCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEG
T ss_pred hhhhccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeC
Confidence 999999999999999999998764433 221233678888888777775 9999999999999998654 6888886
Q ss_pred cCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 152 PQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 152 ~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
++.+|++|+++++++.+|++++|++
T Consensus 209 --~~~~t~~eia~~~s~~~G~~v~y~~ 233 (233)
T PF05368_consen 209 --GETLTYNEIAAILSKVLGKKVKYVQ 233 (233)
T ss_dssp --GGEEEHHHHHHHHHHHHTSEEEEEE
T ss_pred --CCCCCHHHHHHHHHHHHCCccEEeC
Confidence 5899999999999999999999874
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-26 Score=176.74 Aligned_cols=175 Identities=23% Similarity=0.293 Sum_probs=139.8
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYL 69 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~ 69 (191)
||+.|++++.++++|+|+|||+++... ..++.++++||+++| |+|||. |+++... .+..++.
T Consensus 50 ~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~------~~~~~~~ 122 (317)
T CHL00194 50 GDLSLPETLPPSFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQ------YPYIPLM 122 (317)
T ss_pred CCCCCHHHHHHHHCCCCEEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEeccccccc------cCCChHH
Confidence 699999999999999999999876431 345689999999999 999986 5554321 1234577
Q ss_pred HHHHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeE
Q 038413 70 EKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVI 149 (191)
Q Consensus 70 ~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~ 149 (191)
.+|.++|+++++++++||++||+.+++++...+..+........+ ++++.++++||++|+|++++.++.++...+++|+
T Consensus 123 ~~K~~~e~~l~~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~n 201 (317)
T CHL00194 123 KLKSDIEQKLKKSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFP 201 (317)
T ss_pred HHHHHHHHHHHHcCCCeEEEeecHHhhhhhhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEE
Confidence 899999999999999999999998887644332222222333333 4556778999999999999999998777799999
Q ss_pred eecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 150 YRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 150 i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
++| ++.+|++|+++++++.+|++..+..+|....
T Consensus 202 i~g-~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~ 235 (317)
T CHL00194 202 LVG-PKSWNSSEIISLCEQLSGQKAKISRVPLFLL 235 (317)
T ss_pred ecC-CCccCHHHHHHHHHHHhCCCCeEEeCCHHHH
Confidence 996 7899999999999999999999998887655
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=172.88 Aligned_cols=175 Identities=15% Similarity=0.218 Sum_probs=138.3
Q ss_pred CCCCCHHHHHHhh------cc-CcEEEEccCCCC--cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhHH
Q 038413 1 GELDEHEKIVSIL------KE-VDVVISTVAYPQ--FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYLE 70 (191)
Q Consensus 1 gD~~d~~~l~~a~------~g-~d~V~~~~~~~~--~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~ 70 (191)
+|+.|+++|.+++ +| +|.||++++... .....++++||+++| |+|||. |+.+.... . .
T Consensus 46 ~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~-----~------~ 113 (285)
T TIGR03649 46 FDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIPDLAPPMIKFIDFARSKG-VRRFVLLSASIIEKG-----G------P 113 (285)
T ss_pred ccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCCChhHHHHHHHHHHHHcC-CCEEEEeeccccCCC-----C------c
Confidence 5899999999999 67 999999887532 456789999999999 999986 44333211 0 1
Q ss_pred HHHHHHHHHHhc-CCCeEEEecccccccccccccCCCC-CCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCcee
Q 038413 71 KKRIVRRAIEAV-EIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIV 148 (191)
Q Consensus 71 ~k~~~e~~l~~~-~~~~tilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~ 148 (191)
.+..+++++++. |++||++||++|++++...+..... ..+.+ +.+.|+.+.++|+++|+|++++.++.++...++.+
T Consensus 114 ~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~ 192 (285)
T TIGR03649 114 AMGQVHAHLDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKI-YSATGDGKIPFVSADDIARVAYRALTDKVAPNTDY 192 (285)
T ss_pred hHHHHHHHHHhccCCCEEEEeccHHhhhhcccccccccccCCeE-EecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeE
Confidence 234567888885 9999999999999886432221111 33343 34567888999999999999999999887678888
Q ss_pred EeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 149 IYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 149 ~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
++.+ ++.+|+.|+++++++++|++++++.+|.+++.+.+.
T Consensus 193 ~l~g-~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~ 232 (285)
T TIGR03649 193 VVLG-PELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQ 232 (285)
T ss_pred EeeC-CccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHH
Confidence 8885 799999999999999999999999999999988765
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.4e-23 Score=163.39 Aligned_cols=176 Identities=18% Similarity=0.246 Sum_probs=139.5
Q ss_pred CCCCCHHHHHHhhc----cCcEEEEccCCCC----------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCc
Q 038413 1 GELDEHEKIVSILK----EVDVVISTVAYPQ----------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPF 65 (191)
Q Consensus 1 gD~~d~~~l~~a~~----g~d~V~~~~~~~~----------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~ 65 (191)
+|++|.+++.++++ ++|+|||+++... ..++.+++++|++.| ++|||. |+.+.. .|.
T Consensus 118 ~Dl~d~~~l~~~~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~-------~p~ 189 (390)
T PLN02657 118 GDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQ-------KPL 189 (390)
T ss_pred eeCCCHHHHHHHHHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeecccc-------Ccc
Confidence 68999999999998 5999999886421 345789999999999 999885 544322 234
Q ss_pred hhhHHHHHHHHHHHHh--cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee-eecchhhHHHHHHHHhcCcc
Q 038413 66 EAYLEKKRIVRRAIEA--VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA-VFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~--~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~i~~~Dva~~~~~~l~~~~ 142 (191)
..+..+|..+|+++.+ ++++||++||+.|+++.... ......++.+.++|+|+.++ ++||++|+|++++.++.++.
T Consensus 190 ~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~~-~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~ 268 (390)
T PLN02657 190 LEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGGQ-VEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES 268 (390)
T ss_pred hHHHHHHHHHHHHHHhccCCCCEEEEccHHHhcccHHH-HHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc
Confidence 5677899999999986 79999999999998754322 12222455666788887654 67999999999999998877
Q ss_pred cCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHH
Q 038413 143 TCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELV 185 (191)
Q Consensus 143 ~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~ 185 (191)
..+++++++++++.+|+.|+++++.+.+|++++++.+|...+.
T Consensus 269 ~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~~ 311 (390)
T PLN02657 269 KINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQIMD 311 (390)
T ss_pred ccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHHHH
Confidence 6789999985236899999999999999999999999877654
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-22 Score=154.77 Aligned_cols=178 Identities=18% Similarity=0.232 Sum_probs=135.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHcCCccEEEc-CCc---ccCC------
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVAGNIKRFLP-SEF---GCEE------ 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g~vkr~v~-s~~---g~~~------ 56 (191)
||++|.+++.+|++|+|+|||+++... +++++||++||++++ |||||. ||. +.+.
T Consensus 52 ~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~ 130 (280)
T PF01073_consen 52 GDITDPESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPII 130 (280)
T ss_pred eccccHHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcc
Confidence 699999999999999999999988642 578999999999999 999985 432 2200
Q ss_pred --CCCCC--CCCchhhHHHHHHHHHHHHhc-C--------CCeEEEecccccccccccccC----CCCCCceEEEecCCc
Q 038413 57 --DRVRP--LPPFEAYLEKKRIVRRAIEAV-E--------IPYTFVSANCYGAYFVNVLLR----PFEPHDDVVVYGNGE 119 (191)
Q Consensus 57 --~~~~~--~~~~~~~~~~k~~~e~~l~~~-~--------~~~tilrp~~~~~~~~~~~~~----~~~~~~~~~~~~~g~ 119 (191)
++... ..+...|..+|..+|+++.+. + +.+++|||+..+|++...+.. ....+......|++.
T Consensus 131 ~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~ 210 (280)
T PF01073_consen 131 NGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGN 210 (280)
T ss_pred cCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCC
Confidence 01110 113446788999999998752 2 788999999999876443321 111333566777788
Q ss_pred ceeeecchhhHHHHHHHHhc---Cc----ccCCceeEeecCCCccC-HHHHHHHHHHHhCCceEE-EEcC
Q 038413 120 AKAVFNYEEDIAKCTIKVIN---DP----RTCNRIVIYRPQTNIIS-QLELISLWEQKTGRSFKR-VHIS 180 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~---~~----~~~~~~~~i~~~~~~~t-~~e~~~~~~~~~g~~~~~-~~~~ 180 (191)
.+.+++|++|+|.+++.+++ ++ ...|+.|++++ +++++ +.|++..+.+.+|.+.+. +++|
T Consensus 211 ~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd-~~p~~~~~~f~~~~~~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 211 NLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITD-GEPVPSFWDFMRPLWEALGYPPPKSISLP 279 (280)
T ss_pred ceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEEC-CCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence 88999999999999877654 33 35689999997 78888 999999999999988776 6666
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=145.44 Aligned_cols=178 Identities=19% Similarity=0.304 Sum_probs=135.5
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCC----cccCCCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSE----FGCEEDR- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~----~g~~~~~- 58 (191)
||+.|.+.|.+.|+ ..|+|+|.++... +.++.+|+++|+++| |++||+|| ||.....
T Consensus 51 gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~P 129 (329)
T COG1087 51 GDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTSP 129 (329)
T ss_pred eccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCcc
Confidence 79999999999996 6899999998642 567899999999999 99999764 7764332
Q ss_pred ---CCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccc---------c------ccccccCCCC-CCceEEEe
Q 038413 59 ---VRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGA---------Y------FVNVLLRPFE-PHDDVVVY 115 (191)
Q Consensus 59 ---~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~---------~------~~~~~~~~~~-~~~~~~~~ 115 (191)
..+..|.+||.++|..+|+.|++ .++++++||.-...+ + ++|...+..+ +...+.++
T Consensus 130 I~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~if 209 (329)
T COG1087 130 ISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIF 209 (329)
T ss_pred cCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEe
Confidence 33346788999999999999986 589999999321111 0 1111111111 44557776
Q ss_pred c------CCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 116 G------NGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 116 ~------~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
| +|+.-+|+||+.|+|++.+.+|+.-+ ..+.++++++ +.-.|..|+++.+.+++|++++++..|
T Consensus 210 G~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~-G~G~SV~evi~a~~~vtg~~ip~~~~~ 281 (329)
T COG1087 210 GDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGS-GNGFSVLEVIEAAKKVTGRDIPVEIAP 281 (329)
T ss_pred CCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccC-CCceeHHHHHHHHHHHhCCcCceeeCC
Confidence 6 56677999999999999999987522 2236899996 899999999999999999998887544
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-21 Score=153.75 Aligned_cols=170 Identities=14% Similarity=0.133 Sum_probs=126.2
Q ss_pred HHHhh--ccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc-CC---cccCCCCCC-CCCCchhhHHHHHHHHHHHHh
Q 038413 9 IVSIL--KEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP-SE---FGCEEDRVR-PLPPFEAYLEKKRIVRRAIEA 81 (191)
Q Consensus 9 l~~a~--~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~~~~-~~~~~~~~~~~k~~~e~~l~~ 81 (191)
+.+++ .++|+|||+++. ...++.++++||+++| ++|||. |+ |+....... ...+..+. .+|..+|+++++
T Consensus 122 ~~~~~~~~~~d~Vi~~~~~-~~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p~~E~~~~~p~-~sK~~~E~~l~~ 198 (378)
T PLN00016 122 VKSKVAGAGFDVVYDNNGK-DLDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPPHVEGDAVKPK-AGHLEVEAYLQK 198 (378)
T ss_pred HHhhhccCCccEEEeCCCC-CHHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCCCCCCCcCCCc-chHHHHHHHHHH
Confidence 44444 579999998764 4567899999999999 999885 44 332111100 00112222 279999999999
Q ss_pred cCCCeEEEeccccccccccc-----ccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCc
Q 038413 82 VEIPYTFVSANCYGAYFVNV-----LLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNI 156 (191)
Q Consensus 82 ~~~~~tilrp~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~ 156 (191)
.+++|+++||+.++++.... +......++.+.++++|++.++++|++|+|++++.++.++...++.|++++ ++.
T Consensus 199 ~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~-~~~ 277 (378)
T PLN00016 199 LGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVS-DRA 277 (378)
T ss_pred cCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecC-CCc
Confidence 99999999999999854211 111112445677788888889999999999999999998766679999995 788
Q ss_pred cCHHHHHHHHHHHhCCceEEEEcCHH
Q 038413 157 ISQLELISLWEQKTGRSFKRVHISEE 182 (191)
Q Consensus 157 ~t~~e~~~~~~~~~g~~~~~~~~~~~ 182 (191)
+|+.|+++.+++.+|++.+++.++.+
T Consensus 278 ~s~~el~~~i~~~~g~~~~i~~~~~~ 303 (378)
T PLN00016 278 VTFDGMAKACAKAAGFPEEIVHYDPK 303 (378)
T ss_pred cCHHHHHHHHHHHhCCCCceeecCcc
Confidence 99999999999999998877665544
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-20 Score=148.52 Aligned_cols=170 Identities=16% Similarity=0.158 Sum_probs=130.9
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC----
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED---- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~---- 57 (191)
||+.|.+.+.++++++|+|||+++... +.++.+++++|++.| +++||. |+ ||....
T Consensus 76 ~Di~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 154 (348)
T PRK15181 76 GDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLPKI 154 (348)
T ss_pred ccCCCHHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCCCC
Confidence 689999999999999999999998532 456899999999999 999884 32 653221
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc----------ccCCCCCCceEEEecCCcceee
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV----------LLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+.....|..+|..+|...|..+.. .+++++++||+..+++.... +......++.+.++++|.++++
T Consensus 155 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd 234 (348)
T PRK15181 155 EERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRD 234 (348)
T ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEe
Confidence 111224667888999999988753 58999999999998864211 1111125567788889999999
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
|+|++|+|++++.++..+. ..+++|++++ ++.+|+.|+++.+.+.++.
T Consensus 235 ~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~-g~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 235 FCYIENVIQANLLSATTNDLASKNKVYNVAV-GDRTSLNELYYLIRDGLNL 284 (348)
T ss_pred eEEHHHHHHHHHHHHhcccccCCCCEEEecC-CCcEeHHHHHHHHHHHhCc
Confidence 9999999999988776432 3468999995 7999999999999999973
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=143.76 Aligned_cols=176 Identities=17% Similarity=0.235 Sum_probs=133.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC---
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED--- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~--- 57 (191)
+|+.|.+.+.++++++|+|||+++... ..++.|++++|++.+ +++||. |+ ||....
T Consensus 71 ~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~ 149 (370)
T PLN02695 71 VDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLET 149 (370)
T ss_pred CCCCCHHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCc
Confidence 588999999988999999999996431 345789999999999 999884 43 543211
Q ss_pred -----CC--CCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc----------ccC-CCCCCceEEEe
Q 038413 58 -----RV--RPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV----------LLR-PFEPHDDVVVY 115 (191)
Q Consensus 58 -----~~--~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~----------~~~-~~~~~~~~~~~ 115 (191)
+. ....|..+|..+|..+|+.+.. .+++++++||+.++++.... +.. .......+.++
T Consensus 150 ~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (370)
T PLN02695 150 NVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMW 229 (370)
T ss_pred CCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEe
Confidence 11 1234566788899999988754 59999999999988863211 110 00123567788
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
++|++.++|+|++|+++++..++.++ .++.|++++ ++.+|+.|+++.+.+.+|++.++..+|
T Consensus 230 g~g~~~r~~i~v~D~a~ai~~~~~~~--~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~i~~~~ 291 (370)
T PLN02695 230 GDGKQTRSFTFIDECVEGVLRLTKSD--FREPVNIGS-DEMVSMNEMAEIALSFENKKLPIKHIP 291 (370)
T ss_pred CCCCeEEeEEeHHHHHHHHHHHHhcc--CCCceEecC-CCceeHHHHHHHHHHHhCCCCCceecC
Confidence 89999999999999999999988764 357899985 789999999999999999876665543
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.9e-19 Score=142.64 Aligned_cols=176 Identities=19% Similarity=0.194 Sum_probs=130.2
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC------------------cccHHHHHHHHHHcCCcc-EEEc-C---CcccC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ------------------FLDQLKIVHAIKVAGNIK-RFLP-S---EFGCE 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~------------------~~~~~~li~aa~~~g~vk-r~v~-s---~~g~~ 55 (191)
+|+.|.+.+.++++ ++|+|||+++... +.++.+++++|++.| ++ |||. | .||..
T Consensus 120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~ 198 (442)
T PLN02572 120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTP 198 (442)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCC
Confidence 68999999999998 5899999985421 346799999999999 86 7773 3 26642
Q ss_pred C---CC-----------C---CCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc------------
Q 038413 56 E---DR-----------V---RPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL------------ 102 (191)
Q Consensus 56 ~---~~-----------~---~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~------------ 102 (191)
. ++ . ....|..+|..+|...|..++. .|++++++||+..+|.+....
T Consensus 199 ~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~ 278 (442)
T PLN02572 199 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDY 278 (442)
T ss_pred CCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCc
Confidence 1 00 0 1224566788999999888754 499999999999988652210
Q ss_pred -----------cCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCC--ceeEeecCCCccCHHHHHHHHHHH
Q 038413 103 -----------LRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCN--RIVIYRPQTNIISQLELISLWEQK 169 (191)
Q Consensus 103 -----------~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~--~~~~i~~~~~~~t~~e~~~~~~~~ 169 (191)
......++.+.++|+|++.++|+|++|+|++++.+++++...+ ..++++ ++.+|+.|+++++.+.
T Consensus 279 ~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nig--s~~~si~el~~~i~~~ 356 (442)
T PLN02572 279 DGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQF--TEQFSVNELAKLVTKA 356 (442)
T ss_pred ccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeC--CCceeHHHHHHHHHHH
Confidence 0001134567788899999999999999999999998753223 468886 4789999999999999
Q ss_pred ---hCCceEEEEc
Q 038413 170 ---TGRSFKRVHI 179 (191)
Q Consensus 170 ---~g~~~~~~~~ 179 (191)
+|++..+...
T Consensus 357 ~~~~g~~~~~~~~ 369 (442)
T PLN02572 357 GEKLGLDVEVISV 369 (442)
T ss_pred HHhhCCCCCeeeC
Confidence 8877665544
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=129.81 Aligned_cols=172 Identities=18% Similarity=0.210 Sum_probs=138.3
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCcc-EEEc-C---CcccCCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIK-RFLP-S---EFGCEED- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vk-r~v~-s---~~g~~~~- 57 (191)
||+.|.+.+.+.|+ ..|+|+|.|+... +.++.+|++|+++.. .+ ||+. | .||.-..
T Consensus 58 ~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~-~~frf~HISTDEVYG~l~~~ 136 (340)
T COG1088 58 GDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW-GKFRFHHISTDEVYGDLGLD 136 (340)
T ss_pred ccccCHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhc-ccceEEEeccccccccccCC
Confidence 79999999999998 5899999998653 467899999999998 54 7773 3 3664222
Q ss_pred -----CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccc------cccccCCCCCCceEEEecCCccee
Q 038413 58 -----RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYF------VNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 58 -----~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
+..+..|.+||.++|..+...+++ .|++.+|.||+.-+++. +|....-.+.+.+++++|+|.+.+
T Consensus 137 ~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iR 216 (340)
T COG1088 137 DDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIR 216 (340)
T ss_pred CCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCccee
Confidence 233457889999999888777765 69999999998766642 222222234788999999999999
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceE
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~ 175 (191)
+|++++|-++++-.+|...+. |++|+|+| +...+..|++++|.+.+|+..+
T Consensus 217 DWl~VeDh~~ai~~Vl~kg~~-GE~YNIgg-~~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 217 DWLYVEDHCRAIDLVLTKGKI-GETYNIGG-GNERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred eeEEeHhHHHHHHHHHhcCcC-CceEEeCC-CccchHHHHHHHHHHHhCcccc
Confidence 999999999999999998764 99999996 7899999999999999997544
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-18 Score=131.29 Aligned_cols=170 Identities=18% Similarity=0.189 Sum_probs=127.4
Q ss_pred CCCCCHHHHHHhhccC--cEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cCC---cccCC---
Q 038413 1 GELDEHEKIVSILKEV--DVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~--d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~~--- 56 (191)
+|+.|.+++.++++++ |+|||+++... ..++.+++++|++.+ + +|| .|+ |+...
T Consensus 34 ~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~~ 111 (287)
T TIGR01214 34 LDLTDPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGEGKRP 111 (287)
T ss_pred cCCCCHHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCCCCCC
Confidence 5899999999999876 99999998632 235789999999998 6 665 343 43211
Q ss_pred -CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEecccccccccc-c----ccCCCCCCceEEEecCCcceeeecchhhH
Q 038413 57 -DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVN-V----LLRPFEPHDDVVVYGNGEAKAVFNYEEDI 130 (191)
Q Consensus 57 -~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~-~----~~~~~~~~~~~~~~~~g~~~~~~i~~~Dv 130 (191)
.+.....|...|..+|..+|++++..+++++++||+.+++.... . +......++.+.+.+ +..+++++++|+
T Consensus 112 ~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dv 189 (287)
T TIGR01214 112 YREDDATNPLNVYGQSKLAGEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDL 189 (287)
T ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHH
Confidence 11222245667889999999999988999999999999876421 1 111112334555554 356899999999
Q ss_pred HHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceE
Q 038413 131 AKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 131 a~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~ 175 (191)
|+++..++.++...++.+++++ ++.+|+.|+++.+.+.+|++..
T Consensus 190 a~a~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~ 233 (287)
T TIGR01214 190 ARVIAALLQRLARARGVYHLAN-SGQCSWYEFAQAIFEEAGADGL 233 (287)
T ss_pred HHHHHHHHhhccCCCCeEEEEC-CCCcCHHHHHHHHHHHhCcccc
Confidence 9999999988655688999996 7899999999999999997643
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-18 Score=146.07 Aligned_cols=172 Identities=16% Similarity=0.214 Sum_probs=130.8
Q ss_pred CCCCCHHHHHHhh--ccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC--
Q 038413 1 GELDEHEKIVSIL--KEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED-- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~--~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~-- 57 (191)
||+.|.+.+..++ .++|+|||+++... +.++.+++++|++.|.++|||. |+ ||....
T Consensus 64 ~Dl~d~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~ 143 (668)
T PLN02260 64 GDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA 143 (668)
T ss_pred CCCCChHHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCcccc
Confidence 6899988888776 58999999998643 2457899999999865899884 43 553211
Q ss_pred -----CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccc------ccccCCCCCCceEEEecCCccee
Q 038413 58 -----RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFV------NVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 58 -----~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
+.....|..+|..+|..+|+++++ .+++++++||+.+++... +.+......++.+.++++|++.+
T Consensus 144 ~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r 223 (668)
T PLN02260 144 DVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVR 223 (668)
T ss_pred ccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceE
Confidence 111223567788999999998864 589999999999887532 11111112456678888898899
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
+|||++|+|+++..++..+. .++.|++++ ++.+|+.|+++.+.+.+|.+.
T Consensus 224 ~~ihV~Dva~a~~~~l~~~~-~~~vyni~~-~~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 224 SYLYCEDVAEAFEVVLHKGE-VGHVYNIGT-KKERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred eeEEHHHHHHHHHHHHhcCC-CCCEEEECC-CCeeEHHHHHHHHHHHhCCCC
Confidence 99999999999999887653 468999985 789999999999999999753
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.1e-18 Score=136.95 Aligned_cols=169 Identities=18% Similarity=0.280 Sum_probs=125.6
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC----C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE----D 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~----~ 57 (191)
||+.|.+.+.++++++|+|||+++... +.++.+++++|++++ +|||. |+ ||... .
T Consensus 72 ~Dl~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~ 149 (386)
T PLN02427 72 INIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLP 149 (386)
T ss_pred cCCCChHHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCC
Confidence 689999999999999999999997421 234688999998876 67773 43 55321 0
Q ss_pred CCCC----------------------CCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc----------
Q 038413 58 RVRP----------------------LPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV---------- 101 (191)
Q Consensus 58 ~~~~----------------------~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~---------- 101 (191)
+... ..|.++|..+|..+|+++.. .+++++++||+..++.....
T Consensus 150 e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~ 229 (386)
T PLN02427 150 KDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 229 (386)
T ss_pred cccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccc
Confidence 0000 01234688899999999865 58999999999988864210
Q ss_pred ---cc----CCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcc-cCCceeEeecCC-CccCHHHHHHHHHHHhCC
Q 038413 102 ---LL----RPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR-TCNRIVIYRPQT-NIISQLELISLWEQKTGR 172 (191)
Q Consensus 102 ---~~----~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i~~~~-~~~t~~e~~~~~~~~~g~ 172 (191)
+. .....++.+.+++++.+.++|||++|+|++++.+++++. ..++.|++++ + +.+|+.|+++++.+.+|.
T Consensus 230 ~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~-~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 230 VPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGN-PNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred cchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCC-CCCCccHHHHHHHHHHHhcc
Confidence 00 001245567788888888999999999999999998864 4568899985 5 589999999999999985
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.5e-18 Score=134.45 Aligned_cols=169 Identities=16% Similarity=0.206 Sum_probs=127.9
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHH---------cCCccEEEc-CC--
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKV---------AGNIKRFLP-SE-- 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~---------~g~vkr~v~-s~-- 51 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++ .+ +++|+. |+
T Consensus 58 ~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i~~SS~~ 136 (355)
T PRK10217 58 VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFHHISTDE 136 (355)
T ss_pred CCCcChHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEEEecchh
Confidence 589999999999984 899999998632 3567899999986 35 778773 43
Q ss_pred -cccCC------CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--c----ccCCCCCCceEEE
Q 038413 52 -FGCEE------DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--V----LLRPFEPHDDVVV 114 (191)
Q Consensus 52 -~g~~~------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--~----~~~~~~~~~~~~~ 114 (191)
||... .+.....|.++|..+|..+|..+.. .+++++++||+.+++++.. . +......++.+.+
T Consensus 137 vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~ 216 (355)
T PRK10217 137 VYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPV 216 (355)
T ss_pred hcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceE
Confidence 55311 1111224567788999999888753 5899999999998886531 1 1111124456778
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+++|+++++|+|++|+|+++..++..+. .++.|++++ ++.+|+.|+++.+.+.+|+
T Consensus 217 ~g~g~~~~~~i~v~D~a~a~~~~~~~~~-~~~~yni~~-~~~~s~~~~~~~i~~~~~~ 272 (355)
T PRK10217 217 YGNGQQIRDWLYVEDHARALYCVATTGK-VGETYNIGG-HNERKNLDVVETICELLEE 272 (355)
T ss_pred eCCCCeeeCcCcHHHHHHHHHHHHhcCC-CCCeEEeCC-CCcccHHHHHHHHHHHhcc
Confidence 8899999999999999999999998753 468899996 7899999999999999985
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.5e-18 Score=133.24 Aligned_cols=172 Identities=22% Similarity=0.236 Sum_probs=125.1
Q ss_pred CCCC-CHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC---
Q 038413 1 GELD-EHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED--- 57 (191)
Q Consensus 1 gD~~-d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~--- 57 (191)
+|+. +.+.+.++++++|+|||+++... +.++.+++++|++.+ +|||. |+ ||....
T Consensus 53 ~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~ 130 (347)
T PRK11908 53 GDITINKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEF 130 (347)
T ss_pred CCCCCCHHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCc
Confidence 5886 67788888999999999987421 355789999999987 46663 33 553211
Q ss_pred -CC-CC------CCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc--------------cCCCCCCce
Q 038413 58 -RV-RP------LPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL--------------LRPFEPHDD 111 (191)
Q Consensus 58 -~~-~~------~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~--------------~~~~~~~~~ 111 (191)
+. .. ..|.++|..+|..+|+++.. .+++++++||+.+++.+...+ ......++.
T Consensus 131 ~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 210 (347)
T PRK11908 131 DPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEP 210 (347)
T ss_pred CccccccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCc
Confidence 11 10 12445688899999988864 689999999998888642110 000114456
Q ss_pred EEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 112 ~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
+.++++|++.++|||++|+|+++..++.++. ..++.|+++++.+.+|+.|+++.+.+.+|...
T Consensus 211 ~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~ 275 (347)
T PRK11908 211 ISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP 275 (347)
T ss_pred eEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc
Confidence 6777788889999999999999999998753 45789999852257999999999999999643
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=129.26 Aligned_cols=170 Identities=19% Similarity=0.269 Sum_probs=126.3
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCcc-EEEc-CC---cccCC--
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIK-RFLP-SE---FGCEE-- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vk-r~v~-s~---~g~~~-- 56 (191)
+|+.|++++.+++++ +|+|||+++... ..++.+++++|++.+ ++ +++. |+ ||...
T Consensus 57 ~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~g~~~~~ 135 (317)
T TIGR01181 57 GDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVYGDLEKG 135 (317)
T ss_pred cCCcCHHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeeccceeCCCCCC
Confidence 589999999999987 899999998532 245688999999875 43 6663 43 44321
Q ss_pred ---CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--cc----cCCCCCCceEEEecCCcceee
Q 038413 57 ---DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--VL----LRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 57 ---~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--~~----~~~~~~~~~~~~~~~g~~~~~ 123 (191)
.+.....|...|..+|..+|.+++. .+++++++||+.+++.... .+ ......++.+.+++++++.++
T Consensus 136 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 215 (317)
T TIGR01181 136 DAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRD 215 (317)
T ss_pred CCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEe
Confidence 1112223455688899999988763 5899999999988875321 11 111114455777888888899
Q ss_pred ecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 124 FNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
++|++|+|+++..+++++ ..++.|++++ ++.+|+.|+++++.+.+|++
T Consensus 216 ~i~v~D~a~~~~~~~~~~-~~~~~~~~~~-~~~~s~~~~~~~i~~~~~~~ 263 (317)
T TIGR01181 216 WLYVEDHCRAIYLVLEKG-RVGETYNIGG-GNERTNLEVVETILELLGKD 263 (317)
T ss_pred eEEHHHHHHHHHHHHcCC-CCCceEEeCC-CCceeHHHHHHHHHHHhCCC
Confidence 999999999999999864 3468899985 78999999999999999975
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-17 Score=126.52 Aligned_cols=175 Identities=17% Similarity=0.108 Sum_probs=125.2
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~- 57 (191)
+|+.|.+++.++++ ++|+|||+++... ..++.+++++|++.+ ++|||. |+ ||....
T Consensus 33 ~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~ 111 (306)
T PLN02725 33 LDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQ 111 (306)
T ss_pred CCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCC
Confidence 68999999999887 5799999996421 346789999999999 999884 43 442211
Q ss_pred ---CCC----CCCCch-hhHHHHHHHHHHHH----hcCCCeEEEeccccccccccc----------ccC----CCCCCce
Q 038413 58 ---RVR----PLPPFE-AYLEKKRIVRRAIE----AVEIPYTFVSANCYGAYFVNV----------LLR----PFEPHDD 111 (191)
Q Consensus 58 ---~~~----~~~~~~-~~~~~k~~~e~~l~----~~~~~~tilrp~~~~~~~~~~----------~~~----~~~~~~~ 111 (191)
+.. ...|.. .|..+|..+|+.++ ..+++++++||+.+++..... ... ....+..
T Consensus 112 ~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 191 (306)
T PLN02725 112 PIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAP 191 (306)
T ss_pred CCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCC
Confidence 110 112333 37788998887664 358999999999988864211 000 0012233
Q ss_pred EEE-ecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 112 VVV-YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 112 ~~~-~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
+.+ +++|++.+++||++|+++++..+++++. ..+.+++++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 192 ~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~-~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~~~~ 257 (306)
T PLN02725 192 EVVVWGSGSPLREFLHVDDLADAVVFLMRRYS-GAEHVNVGS-GDEVTIKELAELVKEVVGFEGELVW 257 (306)
T ss_pred eEEEcCCCCeeeccccHHHHHHHHHHHHhccc-cCcceEeCC-CCcccHHHHHHHHHHHhCCCCceee
Confidence 344 6778888999999999999999998753 245678985 7899999999999999997655543
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.1e-17 Score=126.90 Aligned_cols=167 Identities=15% Similarity=0.146 Sum_probs=120.3
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cCC---cccC----
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCE---- 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~---- 55 (191)
||+.|.+.+.++++ ++|+|||+++... ..++.+++++|++.| + +|| .|+ ||..
T Consensus 38 ~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~~~~p 115 (299)
T PRK09987 38 GDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGTGDIP 115 (299)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCCCCCC
Confidence 69999999999998 5899999998642 345789999999999 7 455 343 4322
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEecccccccccccc----cCCCCCCceEEEecC--Ccceeeecchhh
Q 038413 56 EDRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVL----LRPFEPHDDVVVYGN--GEAKAVFNYEED 129 (191)
Q Consensus 56 ~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~----~~~~~~~~~~~~~~~--g~~~~~~i~~~D 129 (191)
..+.....|..+|..+|..+|+++.....+++++|+++.+++...++ ......++.+.++++ |.....+...+|
T Consensus 116 ~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~ 195 (299)
T PRK09987 116 WQETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADC 195 (299)
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHH
Confidence 12222345677888999999999988778899999999987543222 111124556777776 444445555667
Q ss_pred HHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 130 IAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 130 va~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
+++++..++..+.. .++|++++ ++.+|+.|+++.+.+.++
T Consensus 196 ~~~~~~~~~~~~~~-~giyni~~-~~~~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 196 TAHAIRVALNKPEV-AGLYHLVA-SGTTTWHDYAALVFEEAR 235 (299)
T ss_pred HHHHHHHhhccCCC-CCeEEeeC-CCCccHHHHHHHHHHHHH
Confidence 78777777765432 46899996 789999999999977643
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.2e-17 Score=129.51 Aligned_cols=170 Identities=15% Similarity=0.190 Sum_probs=127.2
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHc---------CCccEEEc-CC--
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVA---------GNIKRFLP-SE-- 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~---------g~vkr~v~-s~-- 51 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++. + +++||. |+
T Consensus 57 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~-~~~~i~~SS~~ 135 (352)
T PRK10084 57 ADICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKN-AFRFHHISTDE 135 (352)
T ss_pred ecCCCHHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhcccccccccc-ceeEEEecchh
Confidence 58999999999996 4899999998532 35689999999874 4 678773 33
Q ss_pred -cccCC--------------CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--ccc----CCC
Q 038413 52 -FGCEE--------------DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--VLL----RPF 106 (191)
Q Consensus 52 -~g~~~--------------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--~~~----~~~ 106 (191)
||... .+.....|...|..+|..+|.+++. .+++++++|++.+++.... .+. ...
T Consensus 136 vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~ 215 (352)
T PRK10084 136 VYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNA 215 (352)
T ss_pred hcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHH
Confidence 55311 1111224566788999999988764 4899999999988875421 111 101
Q ss_pred CCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 107 EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
..++.+.++++|++.+++||++|+|+++..+++++. .++.|++++ ++..|..|+++.+.+.+|+.
T Consensus 216 ~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~~-~~~~yni~~-~~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 216 LEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEGK-AGETYNIGG-HNEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred hcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC-CCceEEeCC-CCcCcHHHHHHHHHHHhccc
Confidence 134567788889999999999999999999988643 478999985 78999999999999999863
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-16 Score=125.57 Aligned_cols=178 Identities=15% Similarity=0.238 Sum_probs=125.7
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+.+.++++ ++|+|||+++... ..+..+++++|++.| +++||. |+ ||...
T Consensus 57 ~Dl~d~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~~ 135 (338)
T PRK10675 57 GDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKIP 135 (338)
T ss_pred ccCCCHHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCCc
Confidence 58899999999886 6899999987532 235689999999999 999884 43 44211
Q ss_pred -CCCCCC-CCchhhHHHHHHHHHHHHh-----cCCCeEEEeccccccccc-----------c-ccc----CCCC-CCceE
Q 038413 57 -DRVRPL-PPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFV-----------N-VLL----RPFE-PHDDV 112 (191)
Q Consensus 57 -~~~~~~-~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~-----------~-~~~----~~~~-~~~~~ 112 (191)
++.... .|..+|..+|..+|+++++ .+++++++|++..++... + .+. .... ....+
T Consensus 136 ~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (338)
T PRK10675 136 YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSL 215 (338)
T ss_pred cccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCce
Confidence 111111 3566788899999998864 368899999755444210 0 000 0000 12234
Q ss_pred EEec------CCcceeeecchhhHHHHHHHHhcCc--ccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 113 VVYG------NGEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 113 ~~~~------~g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
.+++ +|.+.+++||++|+|++++.+++.. ...+++|++++ ++.+|+.|+++++.+.+|++.++...|
T Consensus 216 ~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 290 (338)
T PRK10675 216 AIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGA-GVGSSVLDVVNAFSKACGKPVNYHFAP 290 (338)
T ss_pred EEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecC-CCceeHHHHHHHHHHHhCCCCCeeeCC
Confidence 4444 5677899999999999999998752 23458999985 789999999999999999887766544
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.8e-18 Score=135.81 Aligned_cols=165 Identities=18% Similarity=0.210 Sum_probs=121.0
Q ss_pred HHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cCC---cccCC----CCC-----C
Q 038413 9 IVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCEE----DRV-----R 60 (191)
Q Consensus 9 l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~~----~~~-----~ 60 (191)
+..++.++|+|||+++... +.++.+++++|+++| + +|| .|+ ||... ++. .
T Consensus 178 ~~~~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~ 255 (436)
T PLN02166 178 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLEHPQKETYWGNVN 255 (436)
T ss_pred ccccccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCCCCCCCCccccccCC
Confidence 3445678999999997421 456799999999999 7 565 343 55321 111 1
Q ss_pred CCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--------cccCCCCCCceEEEecCCcceeeecchh
Q 038413 61 PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--------VLLRPFEPHDDVVVYGNGEAKAVFNYEE 128 (191)
Q Consensus 61 ~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 128 (191)
+..|...|..+|..+|+.+.. .+++++++||+.+++.... .+......++.+.++|++++.++|+|++
T Consensus 256 p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~ 335 (436)
T PLN02166 256 PIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVS 335 (436)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHH
Confidence 122445688899999998764 4899999999988886421 1111112456777888888899999999
Q ss_pred hHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 129 DIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 129 Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
|++++++.+++.+. ++.|++++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 336 Dva~ai~~~~~~~~--~giyNIgs-~~~~Si~ela~~I~~~~g~~~~i~~ 382 (436)
T PLN02166 336 DLVDGLVALMEGEH--VGPFNLGN-PGEFTMLELAEVVKETIDSSATIEF 382 (436)
T ss_pred HHHHHHHHHHhcCC--CceEEeCC-CCcEeHHHHHHHHHHHhCCCCCeee
Confidence 99999999987643 46899985 7899999999999999998765544
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.6e-17 Score=126.70 Aligned_cols=170 Identities=14% Similarity=0.172 Sum_probs=122.6
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCcc---EEEc-CC---cccCC
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIK---RFLP-SE---FGCEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vk---r~v~-s~---~g~~~ 56 (191)
||+.|.+.+.+++++ +|+|||+++... ..++.+++++|++.| ++ +||. |+ ||...
T Consensus 62 ~Dl~d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~ 140 (343)
T TIGR01472 62 GDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQ 140 (343)
T ss_pred eccCCHHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCC
Confidence 689999999999985 699999998632 236789999999988 74 6663 43 66321
Q ss_pred ----CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc-ccC--------CCCCCc-eEEEecCC
Q 038413 57 ----DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV-LLR--------PFEPHD-DVVVYGNG 118 (191)
Q Consensus 57 ----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~-~~~--------~~~~~~-~~~~~~~g 118 (191)
.+.....|.++|..+|..+|.+++. .+++++..|+...++++... +.. ....++ ...++|+|
T Consensus 141 ~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 220 (343)
T TIGR01472 141 EIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNL 220 (343)
T ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCC
Confidence 1222234677889999999988854 47888877754444332111 110 001222 34466888
Q ss_pred cceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
++.++|+|++|+|++++.+++++. ++.|++++ ++.+|+.|+++.+.+.+|++.
T Consensus 221 ~~~rd~i~V~D~a~a~~~~~~~~~--~~~yni~~-g~~~s~~e~~~~i~~~~g~~~ 273 (343)
T TIGR01472 221 DAKRDWGHAKDYVEAMWLMLQQDK--PDDYVIAT-GETHSVREFVEVSFEYIGKTL 273 (343)
T ss_pred ccccCceeHHHHHHHHHHHHhcCC--CccEEecC-CCceeHHHHHHHHHHHcCCCc
Confidence 899999999999999999998753 36799996 799999999999999999764
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.9e-17 Score=127.60 Aligned_cols=164 Identities=12% Similarity=0.090 Sum_probs=119.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------cccHHHHHHHHHHcCCccEEEc-CC----cccCC-------CC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------FLDQLKIVHAIKVAGNIKRFLP-SE----FGCEE-------DR 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------~~~~~~li~aa~~~g~vkr~v~-s~----~g~~~-------~~ 58 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|+++| ++|||. |+ ||... ++
T Consensus 67 ~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E 145 (342)
T PLN02214 67 ADLQDYEALKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDE 145 (342)
T ss_pred cCcCChHHHHHHHhcCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCc
Confidence 589999999999999999999998642 456899999999999 999874 33 33211 11
Q ss_pred CC------CCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccccc-----C--CCCCCceEEEecCCcce
Q 038413 59 VR------PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLL-----R--PFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 59 ~~------~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~-----~--~~~~~~~~~~~~~g~~~ 121 (191)
.. ...|..+|..+|..+|+++.. .+++++++||+..++....... . ..+.+.. ... ++..
T Consensus 146 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~-~~~--~~~~ 222 (342)
T PLN02214 146 SCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSA-KTY--ANLT 222 (342)
T ss_pred ccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCc-ccC--CCCC
Confidence 10 012445678899999988764 5899999999999986532110 0 0011211 122 3446
Q ss_pred eeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 122 AVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
++|||++|+|++++.+++++.. ++.++++ ++.+|+.|+++++.+.++
T Consensus 223 ~~~i~V~Dva~a~~~al~~~~~-~g~yn~~--~~~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 223 QAYVDVRDVALAHVLVYEAPSA-SGRYLLA--ESARHRGEVVEILAKLFP 269 (342)
T ss_pred cCeeEHHHHHHHHHHHHhCccc-CCcEEEe--cCCCCHHHHHHHHHHHCC
Confidence 8999999999999999988654 4568887 367899999999999996
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.4e-17 Score=137.35 Aligned_cols=180 Identities=11% Similarity=0.044 Sum_probs=128.7
Q ss_pred CCCCCH------HHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC-
Q 038413 1 GELDEH------EKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED- 57 (191)
Q Consensus 1 gD~~d~------~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~- 57 (191)
||+.|+ +.+.++ +++|+|||+++... ++++.+++++|++.+ +++|+. |+ ||....
T Consensus 58 ~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~ 135 (657)
T PRK07201 58 GDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGV 135 (657)
T ss_pred cccCCccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCc
Confidence 577773 455554 89999999997532 567899999999999 999884 43 432211
Q ss_pred --CCC---CCCCchhhHHHHHHHHHHHHh-cCCCeEEEeccccccccccc-------------cc-CCCCCCceEEEecC
Q 038413 58 --RVR---PLPPFEAYLEKKRIVRRAIEA-VEIPYTFVSANCYGAYFVNV-------------LL-RPFEPHDDVVVYGN 117 (191)
Q Consensus 58 --~~~---~~~~~~~~~~~k~~~e~~l~~-~~~~~tilrp~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~ 117 (191)
+.. ...+..+|..+|.++|+++.+ .+++++++||+.+++..... .. ........+.+++.
T Consensus 136 ~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (657)
T PRK07201 136 FREDDFDEGQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGP 215 (657)
T ss_pred cccccchhhcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccC
Confidence 110 012345688999999999985 68999999999988742110 00 00001122334455
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce---EEEEcCHHH
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF---KRVHISEEE 183 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~---~~~~~~~~~ 183 (191)
+....++++++|+++++..++..+...++.|++++ ++.+|+.|+++.+.+.+|.+. .+..+|...
T Consensus 216 ~~~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~-~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~ 283 (657)
T PRK07201 216 DGGRTNIVPVDYVADALDHLMHKDGRDGQTFHLTD-PKPQRVGDIYNAFARAAGAPPDARLFGFLPGFV 283 (657)
T ss_pred CCCeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCC-CCCCcHHHHHHHHHHHhCCCccccccccCChHH
Confidence 55668999999999999999887666688999996 799999999999999999987 666666543
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.7e-17 Score=137.53 Aligned_cols=170 Identities=20% Similarity=0.241 Sum_probs=125.0
Q ss_pred CCCCCHHH-HHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC----
Q 038413 1 GELDEHEK-IVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE---- 56 (191)
Q Consensus 1 gD~~d~~~-l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~---- 56 (191)
||++|.+. +.++++++|+|||+++... +.++.++++||+++| +|||. |+ ||...
T Consensus 367 gDl~d~~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~~ 444 (660)
T PRK08125 367 GDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKYF 444 (660)
T ss_pred ccccCcHHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCCc
Confidence 68888655 6778999999999987432 356789999999987 57763 43 55321
Q ss_pred CCCCC------C-CCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc--------------cCCCCCCce
Q 038413 57 DRVRP------L-PPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL--------------LRPFEPHDD 111 (191)
Q Consensus 57 ~~~~~------~-~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~--------------~~~~~~~~~ 111 (191)
++... . .|.++|..+|..+|+++.. .+++++++||+.+++++.... ......++.
T Consensus 445 ~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~ 524 (660)
T PRK08125 445 DEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP 524 (660)
T ss_pred CccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCC
Confidence 11110 0 1334688999999999864 589999999999887642110 001114556
Q ss_pred EEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCC-ccCHHHHHHHHHHHhCCc
Q 038413 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTN-IISQLELISLWEQKTGRS 173 (191)
Q Consensus 112 ~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~-~~t~~e~~~~~~~~~g~~ 173 (191)
+.++++|++.++|||++|+|++++.+++++. ..++.|++++ ++ .+|+.|+++++.+.+|.+
T Consensus 525 i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~-~~~~~s~~el~~~i~~~~g~~ 588 (660)
T PRK08125 525 IKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGN-PDNEASIRELAEMLLASFEKH 588 (660)
T ss_pred eEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCC-CCCceeHHHHHHHHHHHhccC
Confidence 7788888999999999999999999998753 3467899985 54 799999999999999964
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.5e-17 Score=132.56 Aligned_cols=166 Identities=17% Similarity=0.204 Sum_probs=120.4
Q ss_pred HHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cCC---cccCCC----CCC-----
Q 038413 9 IVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCEED----RVR----- 60 (191)
Q Consensus 9 l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~~~----~~~----- 60 (191)
+..++.++|+|||+++... +.++.+++++|++.| + ||| .|+ ||.... +..
T Consensus 177 ~~~~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~ 254 (442)
T PLN02206 177 VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQVETYWGNVN 254 (442)
T ss_pred cChhhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCCCccccccCC
Confidence 3445678999999997431 456799999999999 7 565 343 543211 110
Q ss_pred CCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--------cccCCCCCCceEEEecCCcceeeecchh
Q 038413 61 PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--------VLLRPFEPHDDVVVYGNGEAKAVFNYEE 128 (191)
Q Consensus 61 ~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 128 (191)
+..+...|..+|..+|+.+.. .+++++++||+.+++.... .+......++.+.++++|++.++|+|++
T Consensus 255 P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~ 334 (442)
T PLN02206 255 PIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS 334 (442)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHH
Confidence 112245678899999998764 5899999999888876421 1111112456678888998899999999
Q ss_pred hHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEc
Q 038413 129 DIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 129 Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~ 179 (191)
|+|++++.+++.+ .++.|++++ ++.+|+.|+++.+.+.+|.+.++...
T Consensus 335 Dva~ai~~a~e~~--~~g~yNIgs-~~~~sl~Elae~i~~~~g~~~~i~~~ 382 (442)
T PLN02206 335 DLVEGLMRLMEGE--HVGPFNLGN-PGEFTMLELAKVVQETIDPNAKIEFR 382 (442)
T ss_pred HHHHHHHHHHhcC--CCceEEEcC-CCceeHHHHHHHHHHHhCCCCceeeC
Confidence 9999999998764 246899995 78999999999999999876655443
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.4e-17 Score=124.73 Aligned_cols=173 Identities=13% Similarity=0.132 Sum_probs=121.9
Q ss_pred CCCCCHHHHHHhh----ccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEE-cCC---cccCCC--
Q 038413 1 GELDEHEKIVSIL----KEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCEED-- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~----~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~~~-- 57 (191)
+|+.+.+.+..+. .++|+|||+++... +.++.+++++|++.+ + +|| .|+ |+....
T Consensus 48 ~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~ 125 (314)
T TIGR02197 48 DYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGF 125 (314)
T ss_pred ccCcchhHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCc
Confidence 3667777776655 48999999998532 356789999999999 7 565 343 442211
Q ss_pred -CC-CCCCCchhhHHHHHHHHHHHHh------cCCCeEEEeccccccccccc------cc----CCCCCCceEEEe----
Q 038413 58 -RV-RPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNV------LL----RPFEPHDDVVVY---- 115 (191)
Q Consensus 58 -~~-~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~------~~----~~~~~~~~~~~~---- 115 (191)
+. ....|..+|..+|..+|.++++ .+++++++||+..++..... +. .....++.+.++
T Consensus 126 ~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (314)
T TIGR02197 126 REGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSE 205 (314)
T ss_pred ccccCcCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCcc
Confidence 11 1123566788899999988764 25789999999888754211 00 001133344443
Q ss_pred --cCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 116 --GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 116 --~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
++|+++++++|++|+++++..++.. ..+++|++++ ++.+|+.|+++.+.+.+|++.++..
T Consensus 206 ~~~~g~~~~~~i~v~D~a~~i~~~~~~--~~~~~yni~~-~~~~s~~e~~~~i~~~~g~~~~~~~ 267 (314)
T TIGR02197 206 GFKDGEQLRDFVYVKDVVDVNLWLLEN--GVSGIFNLGT-GRARSFNDLADAVFKALGKDEKIEY 267 (314)
T ss_pred ccCCCCceeeeEEHHHHHHHHHHHHhc--ccCceEEcCC-CCCccHHHHHHHHHHHhCCCCccee
Confidence 4677889999999999999999987 2467999986 7899999999999999997754333
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=121.97 Aligned_cols=167 Identities=12% Similarity=0.055 Sum_probs=116.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHcCCccEEEc-CCcc------cCCCCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVAGNIKRFLP-SEFG------CEEDRV 59 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g~vkr~v~-s~~g------~~~~~~ 59 (191)
+|+.|.+++.+|++|||.|||++++.. +.++.|+++||++..+|||+|. ||.. ......
T Consensus 64 aDL~d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~ 143 (327)
T KOG1502|consen 64 ADLLDEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGEN 143 (327)
T ss_pred ccccccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCC
Confidence 699999999999999999999998753 4678999999999988999885 4321 111111
Q ss_pred CCC-CCc-----------hhhHHHHHHHH----HHHHhcCCCeEEEecccccccccccccCC------CCCCceEEEecC
Q 038413 60 RPL-PPF-----------EAYLEKKRIVR----RAIEAVEIPYTFVSANCYGAYFVNVLLRP------FEPHDDVVVYGN 117 (191)
Q Consensus 60 ~~~-~~~-----------~~~~~~k~~~e----~~l~~~~~~~tilrp~~~~~~~~~~~~~~------~~~~~~~~~~~~ 117 (191)
... +.. ..|..+|.-+| ++..+.+++.+.+.|+...|+.+...... .+-++....+.
T Consensus 144 ~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~- 222 (327)
T KOG1502|consen 144 SVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP- 222 (327)
T ss_pred cccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC-
Confidence 100 111 23545665555 44566799999999999999765442110 11122222221
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+....|||++|||++.+.+++.|++.+|++ +. ++..++.|+++++.+....
T Consensus 223 -n~~~~~VdVrDVA~AHv~a~E~~~a~GRyi-c~--~~~~~~~ei~~~l~~~~P~ 273 (327)
T KOG1502|consen 223 -NFWLAFVDVRDVALAHVLALEKPSAKGRYI-CV--GEVVSIKEIADILRELFPD 273 (327)
T ss_pred -CCceeeEeHHHHHHHHHHHHcCcccCceEE-Ee--cCcccHHHHHHHHHHhCCC
Confidence 223459999999999999999998766544 43 4788899999999998864
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.4e-16 Score=122.45 Aligned_cols=178 Identities=15% Similarity=0.212 Sum_probs=126.0
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|++|.+.+.++++ ++|+|||+++... +.++.+++++|++.+ +++||. |+ ||...
T Consensus 65 ~D~~~~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~ 143 (352)
T PLN02240 65 VDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEVP 143 (352)
T ss_pred cCcCCHHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCC
Confidence 58999999999886 6899999987532 245689999999999 999874 43 43211
Q ss_pred -CCCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEecccccccccc----------------cccCCCC-CCceEE
Q 038413 57 -DRVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVN----------------VLLRPFE-PHDDVV 113 (191)
Q Consensus 57 -~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~----------------~~~~~~~-~~~~~~ 113 (191)
++.....|..+|..+|..+|+++++ .+++.+++|+...++...+ .+..... ....+.
T Consensus 144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (352)
T PLN02240 144 CTEEFPLSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELT 223 (352)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceE
Confidence 1122234566788999999999863 3577888997655542110 0000000 112344
Q ss_pred Eec------CCcceeeecchhhHHHHHHHHhcC----cccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 114 VYG------NGEAKAVFNYEEDIAKCTIKVIND----PRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 114 ~~~------~g~~~~~~i~~~Dva~~~~~~l~~----~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
++| +|.++++|||++|+|++++.++.. +...++.|++++ ++.+|+.|+++++++.+|++.++...+
T Consensus 224 ~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 299 (352)
T PLN02240 224 VFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGT-GKGTSVLEMVAAFEKASGKKIPLKLAP 299 (352)
T ss_pred EeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccC-CCcEeHHHHHHHHHHHhCCCCCceeCC
Confidence 554 678889999999999998888864 234468999986 799999999999999999877776543
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.7e-16 Score=122.60 Aligned_cols=177 Identities=17% Similarity=0.276 Sum_probs=127.2
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC--
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED-- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~-- 57 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..+++++|++.+ +++++. |+ ||....
T Consensus 54 ~D~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~~ 132 (328)
T TIGR01179 54 GDLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSIP 132 (328)
T ss_pred CCCCCHHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCCC
Confidence 58899999999986 6899999998531 345688999999999 999875 32 332211
Q ss_pred --CCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEeccccccccccccc---------------CCCC-CCceEEE
Q 038413 58 --RVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLL---------------RPFE-PHDDVVV 114 (191)
Q Consensus 58 --~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~---------------~~~~-~~~~~~~ 114 (191)
+.....|..+|..+|..+|.++.. .+++++++||+.+++....... .... ..+.+.+
T Consensus 133 ~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (328)
T TIGR01179 133 ISEDSPLGPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTI 212 (328)
T ss_pred ccccCCCCCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEE
Confidence 111223456788899999988764 5899999999888775321110 0000 1223333
Q ss_pred e------cCCcceeeecchhhHHHHHHHHhcCc--ccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEc
Q 038413 115 Y------GNGEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 115 ~------~~g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~ 179 (191)
+ ++|+.++++||++|+|+++..++... ...++.|++++ ++.+|..|+++.+.+.+|++.++...
T Consensus 213 ~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~-~~~~s~~ei~~~~~~~~g~~~~~~~~ 284 (328)
T TIGR01179 213 FGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGY-GQGFSVLEVIEAFKKVSGVDFPVELA 284 (328)
T ss_pred eCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCC-CCcccHHHHHHHHHHHhCCCcceEeC
Confidence 3 25567789999999999999998753 24578999985 78999999999999999998776543
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=126.74 Aligned_cols=174 Identities=11% Similarity=0.006 Sum_probs=121.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHc-CCccEEEc-CC-----cccC--C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVA-GNIKRFLP-SE-----FGCE--E 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~-g~vkr~v~-s~-----~g~~--~ 56 (191)
+|+.|.+++.++++++|.|||+++... .+++.+++++|++. + |+|||. |+ ||.. .
T Consensus 114 ~Dl~d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vyg~~~~~ 192 (367)
T PLN02686 114 ANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVWRQNYPH 192 (367)
T ss_pred cCCCCHHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcccccCCC
Confidence 589999999999999999999987421 34578999999986 7 999884 33 3211 0
Q ss_pred C------CCC------CCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc-c--CCCCCCceEEEecC
Q 038413 57 D------RVR------PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL-L--RPFEPHDDVVVYGN 117 (191)
Q Consensus 57 ~------~~~------~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~-~--~~~~~~~~~~~~~~ 117 (191)
. +.. ...|..+|..+|..+|+++.. .|++++++||+.+++++.... . ......+...++++
T Consensus 193 ~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~ 272 (367)
T PLN02686 193 DLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLAD 272 (367)
T ss_pred CCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCC
Confidence 0 100 012344678899999998753 589999999999998753210 0 00011122345555
Q ss_pred CcceeeecchhhHHHHHHHHhcCc--ccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEc
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~ 179 (191)
|. .+++|++|+|++++.+++.+ ...++.| +++ ++.+|+.|+++.+.+.+|++......
T Consensus 273 g~--~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~-g~~~s~~e~~~~i~~~~g~~~~~~~~ 332 (367)
T PLN02686 273 GL--LATADVERLAEAHVCVYEAMGNKTAFGRY-ICF-DHVVSREDEAEELARQIGLPINKIAG 332 (367)
T ss_pred CC--cCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEe-CCCccHHHHHHHHHHHcCCCCCcCCC
Confidence 53 57999999999999999853 2335556 664 78999999999999999987655443
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1e-16 Score=137.15 Aligned_cols=149 Identities=11% Similarity=0.074 Sum_probs=116.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKR 73 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~ 73 (191)
+|+.|.+++.++++++|+|||+++... ..++.+++++|++.| ++|||. |+.. |.
T Consensus 47 gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~------------------K~ 107 (854)
T PRK05865 47 ADIRDATAVESAMTGADVVAHCAWVRGRNDHINIDGTANVLKAMAETG-TGRIVFTSSGH------------------QP 107 (854)
T ss_pred eeCCCHHHHHHHHhCCCEEEECCCcccchHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH------------------HH
Confidence 589999999999999999999997542 466899999999999 999885 3311 78
Q ss_pred HHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecC
Q 038413 74 IVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQ 153 (191)
Q Consensus 74 ~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~ 153 (191)
++|+++.+++++++++||+.+++...+.+.... ....+...|+++..++|||++|+|+++..+++.+...++.|++++
T Consensus 108 aaE~ll~~~gl~~vILRp~~VYGP~~~~~i~~l-l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgs- 185 (854)
T PRK05865 108 RVEQMLADCGLEWVAVRCALIFGRNVDNWVQRL-FALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAA- 185 (854)
T ss_pred HHHHHHHHcCCCEEEEEeceEeCCChHHHHHHH-hcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEEC-
Confidence 889999889999999999999986533322111 111222234456678999999999999999976554578899996
Q ss_pred CCccCHHHHHHHHHHHh
Q 038413 154 TNIISQLELISLWEQKT 170 (191)
Q Consensus 154 ~~~~t~~e~~~~~~~~~ 170 (191)
++.+|+.|+++.+.+..
T Consensus 186 g~~~Si~EIae~l~~~~ 202 (854)
T PRK05865 186 PGELTFRRIAAALGRPM 202 (854)
T ss_pred CCcccHHHHHHHHhhhh
Confidence 78999999999998753
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=114.89 Aligned_cols=130 Identities=25% Similarity=0.331 Sum_probs=98.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCC----CCCC-chhhHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVR----PLPP-FEAYLEKK 72 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~----~~~~-~~~~~~~k 72 (191)
||+.|++++.++++|+|+||++++... .+..++++++|+++| ++|++. |+.+....... ...+ ...++..|
T Consensus 46 ~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (183)
T PF13460_consen 46 GDLFDPDSVKAALKGADAVIHAAGPPPKDVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDK 124 (183)
T ss_dssp SCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHH
T ss_pred eeehhhhhhhhhhhhcchhhhhhhhhcccccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhhHHHH
Confidence 689999999999999999999998644 566799999999999 999875 55554332211 0011 23567889
Q ss_pred HHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcC
Q 038413 73 RIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 73 ~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~ 140 (191)
.++|+.+++++++||++||++++++... ... .+..++....++|+++|+|++++.+++|
T Consensus 125 ~~~e~~~~~~~~~~~ivrp~~~~~~~~~--------~~~-~~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 125 REAEEALRESGLNWTIVRPGWIYGNPSR--------SYR-LIKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp HHHHHHHHHSTSEEEEEEESEEEBTTSS--------SEE-EESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred HHHHHHHHhcCCCEEEEECcEeEeCCCc--------cee-EEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 9999999999999999999999987411 111 1222445567999999999999999875
|
... |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.9e-16 Score=121.07 Aligned_cols=171 Identities=20% Similarity=0.238 Sum_probs=126.7
Q ss_pred CCCCCHHHHHHhhccC-cEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc-CC---cccC----
Q 038413 1 GELDEHEKIVSILKEV-DVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCE---- 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~-d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~---- 55 (191)
+|+.|.+.+.++++++ |+|||+++... ++++.+++++|++.+ ++|+|. |+ ++..
T Consensus 49 ~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~~~ 127 (314)
T COG0451 49 LDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPPL 127 (314)
T ss_pred ecccchHHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCCCC
Confidence 4677888888888888 99999998642 345799999999999 999885 33 2221
Q ss_pred -CCCC-CCCCCchhhHHHHHHHHHHHHhc----CCCeEEEecccccccccccc----cCC-----CCCCc-eEEEecCCc
Q 038413 56 -EDRV-RPLPPFEAYLEKKRIVRRAIEAV----EIPYTFVSANCYGAYFVNVL----LRP-----FEPHD-DVVVYGNGE 119 (191)
Q Consensus 56 -~~~~-~~~~~~~~~~~~k~~~e~~l~~~----~~~~tilrp~~~~~~~~~~~----~~~-----~~~~~-~~~~~~~g~ 119 (191)
..+. ....|..+|..+|..+|+.+.+. +++++++||+.+++.+.... ... ..... ...+.+++.
T Consensus 128 ~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (314)
T COG0451 128 PIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGS 207 (314)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCc
Confidence 1111 12234456788999999998863 69999999998887542211 110 11233 355666778
Q ss_pred ceeeecchhhHHHHHHHHhcCcccCCceeEeecCCC-ccCHHHHHHHHHHHhCCceE
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTN-IISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~-~~t~~e~~~~~~~~~g~~~~ 175 (191)
..++++|++|++++++.+++++... .+++++ ++ .+|.+|+++.+.+.+|.+..
T Consensus 208 ~~~~~i~v~D~a~~~~~~~~~~~~~--~~ni~~-~~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 208 QTRDFVYVDDVADALLLALENPDGG--VFNIGS-GTAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred eeEeeEeHHHHHHHHHHHHhCCCCc--EEEeCC-CCCcEEHHHHHHHHHHHhCCCCc
Confidence 8889999999999999999997644 889985 55 89999999999999998755
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.72 E-value=1e-16 Score=125.25 Aligned_cols=163 Identities=16% Similarity=0.145 Sum_probs=115.6
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHc-CCccEEEc-CCcc-----cCC---
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVA-GNIKRFLP-SEFG-----CEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~-g~vkr~v~-s~~g-----~~~--- 56 (191)
+|+.|.+.+.++++++|+|||+++... +.++.+++++|++. + ++|||. |+.+ ...
T Consensus 63 ~Dl~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-v~rvV~~SS~~~~~~~~~~~~~ 141 (322)
T PLN02986 63 ADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPS-VKRVILTSSTAAVLFRQPPIEA 141 (322)
T ss_pred cCCCCcchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCC-ccEEEEecchhheecCCccCCC
Confidence 589999999999999999999998531 34578999999985 7 999884 4322 110
Q ss_pred ----CCCCCC------CCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC--C-----CCCCceEEEe
Q 038413 57 ----DRVRPL------PPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR--P-----FEPHDDVVVY 115 (191)
Q Consensus 57 ----~~~~~~------~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~--~-----~~~~~~~~~~ 115 (191)
++.... .+...|..+|..+|.++.+ .+++++++||+.++++....... . ...+.. .+
T Consensus 142 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~--~~ 219 (322)
T PLN02986 142 NDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN--LF 219 (322)
T ss_pred CCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC--CC
Confidence 000000 1234577899988877653 68999999999998864321100 0 011211 12
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
+.+.++|||++|+|++++.+++++... +.|+++ ++.+|+.|+++++.+.++
T Consensus 220 --~~~~~~~v~v~Dva~a~~~al~~~~~~-~~yni~--~~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 220 --NNRFYRFVDVRDVALAHIKALETPSAN-GRYIID--GPIMSVNDIIDILRELFP 270 (322)
T ss_pred --CCcCcceeEHHHHHHHHHHHhcCcccC-CcEEEe--cCCCCHHHHHHHHHHHCC
Confidence 244579999999999999999987543 478886 578999999999999987
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.4e-16 Score=120.87 Aligned_cols=153 Identities=12% Similarity=0.101 Sum_probs=109.9
Q ss_pred cCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEE-cCC---cccCCC----CCCCCCCchhhHHHHH
Q 038413 15 EVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCEED----RVRPLPPFEAYLEKKR 73 (191)
Q Consensus 15 g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~~~----~~~~~~~~~~~~~~k~ 73 (191)
++|+|||+++... ..++.+++++|++.+ ++ || .|+ ||.... +.....|..+|..+|.
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~ 145 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IP-FLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKF 145 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHH
Confidence 6899999986421 345789999999999 75 66 344 553211 1122346677889999
Q ss_pred HHHHHHHh----cCCCeEEEeccccccccccc--cc--------CCCCCCceEEEe-cCCcceeeecchhhHHHHHHHHh
Q 038413 74 IVRRAIEA----VEIPYTFVSANCYGAYFVNV--LL--------RPFEPHDDVVVY-GNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 74 ~~e~~l~~----~~~~~tilrp~~~~~~~~~~--~~--------~~~~~~~~~~~~-~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
.+|+++++ .+++++++||+..++.+... .. .....+....++ ++++.+++|+|++|+|++++.++
T Consensus 146 ~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~ 225 (308)
T PRK11150 146 LFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFW 225 (308)
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHH
Confidence 99988765 48999999999888854211 00 001123333344 55677899999999999999988
Q ss_pred cCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 139 NDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 139 ~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+.+ .+++|++++ ++.+|+.|+++.+.+.+|.
T Consensus 226 ~~~--~~~~yni~~-~~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 226 ENG--VSGIFNCGT-GRAESFQAVADAVLAYHKK 256 (308)
T ss_pred hcC--CCCeEEcCC-CCceeHHHHHHHHHHHhCC
Confidence 764 257899985 7889999999999999985
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.2e-16 Score=116.19 Aligned_cols=150 Identities=22% Similarity=0.365 Sum_probs=115.4
Q ss_pred CCCCCHHHHHHhhccC--cEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCCC-
Q 038413 1 GELDEHEKIVSILKEV--DVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEEDR- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~--d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~~- 58 (191)
+|+.|.+.+.+++++. |+|||+++... +....+++++|++.+ ++||+. |+ |+.....
T Consensus 49 ~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~ 127 (236)
T PF01370_consen 49 GDLTDKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEP 127 (236)
T ss_dssp SETTSHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSS
T ss_pred eeccccccccccccccCceEEEEeecccccccccccccccccccccccccccccccccc-cccccccccccccccccccc
Confidence 5888999999999876 99999998741 456799999999999 888774 32 5543111
Q ss_pred ---CCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccc---cc-c-cc----CCCCCCceEEEecCCccee
Q 038413 59 ---VRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYF---VN-V-LL----RPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 59 ---~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~---~~-~-~~----~~~~~~~~~~~~~~g~~~~ 122 (191)
.....|..+|..+|...|+++++ .+++++++||+..+++. .. . +. .....++.+.+++++++.+
T Consensus 128 ~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (236)
T PF01370_consen 128 IDEDSPINPLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVR 207 (236)
T ss_dssp BETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCcc
Confidence 11224566788899999998875 48999999999999876 11 1 00 0011556689999999999
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
+++|++|+|+++..+++++...++.|+|+
T Consensus 208 ~~i~v~D~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 208 DFIHVDDLAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp EEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred ceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 99999999999999999987678999884
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.69 E-value=2e-15 Score=117.80 Aligned_cols=175 Identities=15% Similarity=0.145 Sum_probs=123.9
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC-----C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED-----R 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~-----~ 58 (191)
+|+.|.+++.++++++|+|||+++... ..++.+++++|++.+ ++++|. |+ |+.... +
T Consensus 50 ~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e 128 (328)
T TIGR03466 50 GDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDGTPADE 128 (328)
T ss_pred eeCCCHHHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCCCCcCc
Confidence 589999999999999999999986431 356789999999999 999884 33 442111 1
Q ss_pred CCCCCC---chhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC-----C-CCCCceEEEecCCcceeeec
Q 038413 59 VRPLPP---FEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR-----P-FEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 59 ~~~~~~---~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~-----~-~~~~~~~~~~~~g~~~~~~i 125 (191)
.....| ..+|..+|...|+.+++ .+++++++||+.+++........ . .......... +...+++
T Consensus 129 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i 205 (328)
T TIGR03466 129 TTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV---DTGLNLV 205 (328)
T ss_pred cCCCCcccccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee---CCCcceE
Confidence 111111 23567889999888765 58999999999988754221100 0 0011111222 2346899
Q ss_pred chhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHH
Q 038413 126 YEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEE 182 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 182 (191)
|++|+|+++..++.++. .++.++++ ++.+|+.|+++.+.+.+|++.+...+|..
T Consensus 206 ~v~D~a~a~~~~~~~~~-~~~~~~~~--~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 259 (328)
T TIGR03466 206 HVDDVAEGHLLALERGR-IGERYILG--GENLTLKQILDKLAEITGRPAPRVKLPRW 259 (328)
T ss_pred EHHHHHHHHHHHHhCCC-CCceEEec--CCCcCHHHHHHHHHHHhCCCCCCCcCCHH
Confidence 99999999999998754 46677775 58899999999999999998777777654
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-15 Score=118.20 Aligned_cols=164 Identities=13% Similarity=0.106 Sum_probs=115.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHc-CCccEEEc-CC-----cccCC---
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVA-GNIKRFLP-SE-----FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~-g~vkr~v~-s~-----~g~~~--- 56 (191)
||+.|.+.+.++++++|+|||+++... +.++.+++++|++. + ++|||. |+ |+...
T Consensus 62 ~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~ 140 (322)
T PLN02662 62 ANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTP 140 (322)
T ss_pred ccccCcchHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCC
Confidence 588999999999999999999997521 35678999999987 8 999884 43 22111
Q ss_pred ----CCCCCCCC------chhhHHHHHHHHHHHH----hcCCCeEEEecccccccccccccCC-------CCCCceEEEe
Q 038413 57 ----DRVRPLPP------FEAYLEKKRIVRRAIE----AVEIPYTFVSANCYGAYFVNVLLRP-------FEPHDDVVVY 115 (191)
Q Consensus 57 ----~~~~~~~~------~~~~~~~k~~~e~~l~----~~~~~~tilrp~~~~~~~~~~~~~~-------~~~~~~~~~~ 115 (191)
++.....| ..+|..+|..+|+++. +.+++++++||+.++++........ ...+.. .
T Consensus 141 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~--~- 217 (322)
T PLN02662 141 DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ--T- 217 (322)
T ss_pred CCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc--c-
Confidence 00000112 1357788998888764 3699999999999988643211000 001111 1
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
.++..++|||++|+|++++.+++++... +.++++ ++.+|+.|+++++.+.++.
T Consensus 218 -~~~~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~~--g~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 218 -FPNASYRWVDVRDVANAHIQAFEIPSAS-GRYCLV--ERVVHYSEVVKILHELYPT 270 (322)
T ss_pred -CCCCCcCeEEHHHHHHHHHHHhcCcCcC-CcEEEe--CCCCCHHHHHHHHHHHCCC
Confidence 1245689999999999999999987543 467776 4789999999999998863
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=120.39 Aligned_cols=166 Identities=14% Similarity=0.125 Sum_probs=114.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC------
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE------ 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~------ 56 (191)
+|+.|.+.+.++++++|+|||+++... +.++.+++++|++.+.++|||. |+ ++...
T Consensus 63 ~Dl~d~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~ 142 (351)
T PLN02650 63 ADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVY 142 (351)
T ss_pred ecCCChhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCcc
Confidence 589999999999999999999997531 2457899999998764688874 43 22110
Q ss_pred CCCC---------CCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccCCC-------CCCceEEEec
Q 038413 57 DRVR---------PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLRPF-------EPHDDVVVYG 116 (191)
Q Consensus 57 ~~~~---------~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~~~-------~~~~~~~~~~ 116 (191)
++.. ...|.++|..+|..+|.++.. .|++++++||+..++++........ ..++. ..++
T Consensus 143 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~ 221 (351)
T PLN02650 143 DEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNE-AHYS 221 (351)
T ss_pred CcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCc-cccC
Confidence 1110 001234688899999987753 5899999999998886432111000 01111 1122
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
. ...++|+|++|+|++++.+++++... ..| +++ ++.+|+.|+++++.+.++
T Consensus 222 ~-~~~r~~v~V~Dva~a~~~~l~~~~~~-~~~-i~~-~~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 222 I-IKQGQFVHLDDLCNAHIFLFEHPAAE-GRY-ICS-SHDATIHDLAKMLREKYP 272 (351)
T ss_pred c-CCCcceeeHHHHHHHHHHHhcCcCcC-ceE-Eec-CCCcCHHHHHHHHHHhCc
Confidence 1 23479999999999999999876533 355 553 688999999999999886
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=119.37 Aligned_cols=160 Identities=14% Similarity=0.129 Sum_probs=118.8
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPP 64 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~ 64 (191)
+|+.|.+.+.++++++|+|||+++... +.++.+++++|++.| +++||. |+... ..|
T Consensus 60 ~Dl~d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~-------~~p 131 (324)
T TIGR03589 60 GDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKA-------ANP 131 (324)
T ss_pred ccCCCHHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCC-------CCC
Confidence 699999999999999999999998532 346789999999999 999885 43211 134
Q ss_pred chhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccc---ccccCCCCCCc-eEEEecCCcceeeecchhhHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFV---NVLLRPFEPHD-DVVVYGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~---~~~~~~~~~~~-~~~~~~~g~~~~~~i~~~Dva~~ 133 (191)
..+|..+|..+|.+++. .|++++++||+.++++.. +.+......+. .+.+. +++..++|+|++|++++
T Consensus 132 ~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a 210 (324)
T TIGR03589 132 INLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNF 210 (324)
T ss_pred CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHH
Confidence 56788999999988743 589999999999988531 22111111222 34444 56778999999999999
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
++.+++... .++.+ +++ ++..|..|+++.+.+..+.
T Consensus 211 ~~~al~~~~-~~~~~-~~~-~~~~sv~el~~~i~~~~~~ 246 (324)
T TIGR03589 211 VLKSLERML-GGEIF-VPK-IPSMKITDLAEAMAPECPH 246 (324)
T ss_pred HHHHHhhCC-CCCEE-ccC-CCcEEHHHHHHHHHhhCCe
Confidence 999998743 34555 553 5789999999999997643
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-15 Score=118.37 Aligned_cols=168 Identities=14% Similarity=0.153 Sum_probs=116.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHc-CCccEEEc-CC---cccCC-----
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVA-GNIKRFLP-SE---FGCEE----- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~-g~vkr~v~-s~---~g~~~----- 56 (191)
||+.|.+.+.++++++|+|||+++... +.++.+++++|++. + ++|||. |+ ||...
T Consensus 66 ~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~-~~~~v~~SS~~~~g~~~~~~~~ 144 (338)
T PLN00198 66 ADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKS-VKRVILTSSAAAVSINKLSGTG 144 (338)
T ss_pred cCCCChHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeecceeeeccCCCCCC
Confidence 689999999999999999999998531 34567899999886 6 889874 33 44211
Q ss_pred ---CCC---------CCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC------C-CCCCceEE
Q 038413 57 ---DRV---------RPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR------P-FEPHDDVV 113 (191)
Q Consensus 57 ---~~~---------~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~------~-~~~~~~~~ 113 (191)
++. ....|..+|..+|..+|.++.. .+++++++||+..+++....... . ...+..+.
T Consensus 145 ~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
T PLN00198 145 LVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFL 224 (338)
T ss_pred ceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccc
Confidence 010 0113456788999999987764 58999999999998874321100 0 01222333
Q ss_pred Eec-CCc----ceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 114 VYG-NGE----AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 114 ~~~-~g~----~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+.| .+. ..++|+|++|+|++++.++..+... +.+ +++ ++.+|+.|+++++.+.++.
T Consensus 225 ~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~~-~~~-~~~-~~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 225 INGLKGMQMLSGSISITHVEDVCRAHIFLAEKESAS-GRY-ICC-AANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred cccccccccccCCcceeEHHHHHHHHHHHhhCcCcC-CcE-EEe-cCCCCHHHHHHHHHHHCCC
Confidence 333 222 2379999999999999999876433 345 443 5789999999999999863
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.9e-15 Score=117.83 Aligned_cols=169 Identities=12% Similarity=0.131 Sum_probs=119.3
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCcc-----EEEc-CC---ccc
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIK-----RFLP-SE---FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vk-----r~v~-s~---~g~ 54 (191)
+|+.|.+.+.+++++ .|+|||+++... ..++.+++++|++.+ ++ +||. |+ ||.
T Consensus 67 ~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~ 145 (340)
T PLN02653 67 GDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGS 145 (340)
T ss_pred ecCCCHHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCC
Confidence 589999999999975 699999998632 345789999999998 75 7763 32 554
Q ss_pred CC---CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc-cccC--------CCCCCceE-EEecC
Q 038413 55 EE---DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN-VLLR--------PFEPHDDV-VVYGN 117 (191)
Q Consensus 55 ~~---~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~-~~~~--------~~~~~~~~-~~~~~ 117 (191)
.. .+.....|...|..+|..+|.+++. .+++++..|+...+++... .+.. ....+... .++|+
T Consensus 146 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 225 (340)
T PLN02653 146 TPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGN 225 (340)
T ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCC
Confidence 22 1222234667788999999998864 4677666664333322111 1100 00122233 34588
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
|++.++|+|++|+|++++.++..+. ++.|++++ ++.+|+.|+++.+.+.+|.+
T Consensus 226 g~~~rd~i~v~D~a~a~~~~~~~~~--~~~yni~~-g~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 226 LDASRDWGFAGDYVEAMWLMLQQEK--PDDYVVAT-EESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred CcceecceeHHHHHHHHHHHHhcCC--CCcEEecC-CCceeHHHHHHHHHHHcCCC
Confidence 8899999999999999999998753 46799996 79999999999999999964
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-15 Score=112.88 Aligned_cols=175 Identities=17% Similarity=0.193 Sum_probs=138.6
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCC-----------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhH
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQ-----------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYL 69 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~-----------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~ 69 (191)
|+.|++++.++++.+.+||++.|... ..+...|...|+++| |.|||. |..|.+. ...+.+.
T Consensus 117 d~~DedSIr~vvk~sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv------~s~Sr~L 189 (391)
T KOG2865|consen 117 DLRDEDSIRAVVKHSNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGANV------KSPSRML 189 (391)
T ss_pred CCCCHHHHHHHHHhCcEEEEeeccccccCCcccccccchHHHHHHHHHHhhC-hhheeehhhccccc------cChHHHH
Confidence 78999999999999999999999642 355688999999999 999995 6677432 2345688
Q ss_pred HHHHHHHHHHHhcCCCeEEEecccccccc---cccccCCCCCCceEEEecCCc-ceeeecchhhHHHHHHHHhcCcccCC
Q 038413 70 EKKRIVRRAIEAVEIPYTFVSANCYGAYF---VNVLLRPFEPHDDVVVYGNGE-AKAVFNYEEDIAKCTIKVINDPRTCN 145 (191)
Q Consensus 70 ~~k~~~e~~l~~~~~~~tilrp~~~~~~~---~~~~~~~~~~~~~~~~~~~g~-~~~~~i~~~Dva~~~~~~l~~~~~~~ 145 (191)
++|...|..+++.=-+.||+||..+++.. +..+.....+-+.+++++.|. ..-++|++-|||.+++.++.+|.+.+
T Consensus 190 rsK~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~G 269 (391)
T KOG2865|consen 190 RSKAAGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMG 269 (391)
T ss_pred HhhhhhHHHHHhhCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccC
Confidence 99999999999876779999999888731 111111111346778888774 33578999999999999999999899
Q ss_pred ceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 146 RIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 146 ~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
++|...| +...+..|+++.+=+...+-..+...|..-|
T Consensus 270 ktye~vG-P~~yql~eLvd~my~~~~~~~ry~r~~mP~f 307 (391)
T KOG2865|consen 270 KTYEFVG-PDRYQLSELVDIMYDMAREWPRYVRLPMPIF 307 (391)
T ss_pred ceeeecC-CchhhHHHHHHHHHHHHhhccccccCCcHHH
Confidence 9999986 7999999999999999887667776655444
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.4e-15 Score=116.46 Aligned_cols=179 Identities=12% Similarity=0.117 Sum_probs=123.1
Q ss_pred HHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC----CCC-----
Q 038413 6 HEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED----RVR----- 60 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~----~~~----- 60 (191)
.+.+..+..++|+|||+++..+ +.++.+++++|++.+ +++|+. |+ ++.... ...
T Consensus 79 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~ 157 (367)
T TIGR01746 79 DAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTVTEDDAIVTP 157 (367)
T ss_pred HHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCcccccccccc
Confidence 3456677789999999988532 466889999999999 888774 43 322110 000
Q ss_pred CCCCchhhHHHHHHHHHHHHh---cCCCeEEEecccccccccccccCC-----CC--CCceEEEecCCc-ceeeecchhh
Q 038413 61 PLPPFEAYLEKKRIVRRAIEA---VEIPYTFVSANCYGAYFVNVLLRP-----FE--PHDDVVVYGNGE-AKAVFNYEED 129 (191)
Q Consensus 61 ~~~~~~~~~~~k~~~e~~l~~---~~~~~tilrp~~~~~~~~~~~~~~-----~~--~~~~~~~~~~g~-~~~~~i~~~D 129 (191)
...+...|..+|..+|..+++ .|++++++|||.+++......... .. .......++... ...++++++|
T Consensus 158 ~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vdd 237 (367)
T TIGR01746 158 PPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDY 237 (367)
T ss_pred ccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHH
Confidence 001234578899999988875 489999999999987421110000 00 000011222333 3578999999
Q ss_pred HHHHHHHHhcCcccC--CceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 130 IAKCTIKVINDPRTC--NRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 130 va~~~~~~l~~~~~~--~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
+|++++.++.++... ++.|++++ ++.+|+.|+++.+.+ +|.+++ .+|.++|...+.
T Consensus 238 va~ai~~~~~~~~~~~~~~~~~v~~-~~~~s~~e~~~~i~~-~g~~~~--~~~~~~w~~~~~ 295 (367)
T TIGR01746 238 VARAIVALSSQPAASAGGPVFHVVN-PEPVSLDEFLEWLER-AGYNLK--LVSFDEWLQRLE 295 (367)
T ss_pred HHHHHHHHHhCCCcccCCceEEecC-CCCCCHHHHHHHHHH-cCCCCC--cCCHHHHHHHHH
Confidence 999999999876532 78999996 799999999999999 998876 578888877664
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.1e-15 Score=120.32 Aligned_cols=167 Identities=11% Similarity=0.077 Sum_probs=119.8
Q ss_pred CHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHc-CCccEEEc-CC---cccCCC---CC--C--
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVA-GNIKRFLP-SE---FGCEED---RV--R-- 60 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~-g~vkr~v~-s~---~g~~~~---~~--~-- 60 (191)
|.+.+.++++++|+|||+|+..+ +.++.+++++|++. + +++|+. |+ ||.... +. +
T Consensus 102 ~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~k~~V~vST~~vyG~~~~~i~E~~~~~~ 180 (491)
T PLN02996 102 DSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVK-VKMLLHVSTAYVCGEKSGLILEKPFHMG 180 (491)
T ss_pred hHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEeeeEEecCCCceeeeecCCCc
Confidence 55667788899999999998643 46789999999986 6 899874 32 443210 00 0
Q ss_pred ------------------------------------------------CCCCchhhHHHHHHHHHHHHh--cCCCeEEEe
Q 038413 61 ------------------------------------------------PLPPFEAYLEKKRIVRRAIEA--VEIPYTFVS 90 (191)
Q Consensus 61 ------------------------------------------------~~~~~~~~~~~k~~~e~~l~~--~~~~~tilr 90 (191)
...+...|..+|..+|+.+.+ .+++.+++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~lpv~i~R 260 (491)
T PLN02996 181 ETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENLPLVIIR 260 (491)
T ss_pred ccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCCCEEEEC
Confidence 000123477899999999976 489999999
Q ss_pred cccccccccccccC------------CC-CCCceEEEecCCcceeeecchhhHHHHHHHHhcCc--c-cCCceeEeecCC
Q 038413 91 ANCYGAYFVNVLLR------------PF-EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP--R-TCNRIVIYRPQT 154 (191)
Q Consensus 91 p~~~~~~~~~~~~~------------~~-~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~--~-~~~~~~~i~~~~ 154 (191)
|+..++.+-..+.. .. ..+....++|+|++.+++|+++|++++++.++..+ . ..+++|++++ +
T Consensus 261 P~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s-~ 339 (491)
T PLN02996 261 PTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGS-S 339 (491)
T ss_pred CCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecC-C
Confidence 99888743211100 00 13334457888999999999999999999988753 1 2357899985 6
Q ss_pred --CccCHHHHHHHHHHHhCCc
Q 038413 155 --NIISQLELISLWEQKTGRS 173 (191)
Q Consensus 155 --~~~t~~e~~~~~~~~~g~~ 173 (191)
..+|+.|+++++.+..+..
T Consensus 340 ~~~~~s~~ei~~~~~~~~~~~ 360 (491)
T PLN02996 340 LKNPVKFSNLHDFAYRYFSKN 360 (491)
T ss_pred CCCcccHHHHHHHHHHHhhhC
Confidence 7899999999999988753
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.8e-15 Score=112.76 Aligned_cols=175 Identities=17% Similarity=0.071 Sum_probs=114.5
Q ss_pred HHHHHhhccCcEEEEccCCCC-----------------cccHHHHHHHHHHcCCcc--EEEc-CC---cccCCC----CC
Q 038413 7 EKIVSILKEVDVVISTVAYPQ-----------------FLDQLKIVHAIKVAGNIK--RFLP-SE---FGCEED----RV 59 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~-----------------~~~~~~li~aa~~~g~vk--r~v~-s~---~g~~~~----~~ 59 (191)
..+..++.++|+|||+++... +.++.+++++|+++| ++ +|+. |+ ||.... +.
T Consensus 49 ~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~ 127 (292)
T TIGR01777 49 LAESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEE 127 (292)
T ss_pred cchhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcc
Confidence 345567889999999997531 345789999999999 74 4554 32 443211 11
Q ss_pred CCCCCchhhHHHHHHHHHHH---HhcCCCeEEEecccccccccc---cccCCCCCCceEEEecCCcceeeecchhhHHHH
Q 038413 60 RPLPPFEAYLEKKRIVRRAI---EAVEIPYTFVSANCYGAYFVN---VLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 60 ~~~~~~~~~~~~k~~~e~~l---~~~~~~~tilrp~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~ 133 (191)
....+...+...+.+.|+.+ .+.+++++++||+.+++.... .+... ........+++++..+++||++|+|++
T Consensus 128 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~i~v~Dva~~ 206 (292)
T TIGR01777 128 DSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPP-FRLGLGGPLGSGRQWFSWIHIEDLVQL 206 (292)
T ss_pred cCCCCCChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCcchhHHHHHH-HhcCcccccCCCCcccccEeHHHHHHH
Confidence 10111111223333444443 346899999999999885311 11000 000001124677888999999999999
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHH
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVK 186 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~ 186 (191)
+..+++++.. ++.+++++ ++.+|+.|+++.+++.+|++..+ .+|...+..
T Consensus 207 i~~~l~~~~~-~g~~~~~~-~~~~s~~di~~~i~~~~g~~~~~-~~p~~~~~~ 256 (292)
T TIGR01777 207 ILFALENASI-SGPVNATA-PEPVRNKEFAKALARALHRPAFF-PVPAFVLRA 256 (292)
T ss_pred HHHHhcCccc-CCceEecC-CCccCHHHHHHHHHHHhCCCCcC-cCCHHHHHH
Confidence 9999988653 46899985 79999999999999999987643 477766543
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.8e-15 Score=116.58 Aligned_cols=170 Identities=15% Similarity=0.180 Sum_probs=120.3
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+.++++|. |+ |+...
T Consensus 59 ~Dl~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~ 138 (349)
T TIGR02622 59 GDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVW 138 (349)
T ss_pred ccCCCHHHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCC
Confidence 589999999999985 599999998531 3467899999988754678774 33 54321
Q ss_pred --CCCCCCCCchhhHHHHHHHHHHHHh-----------cCCCeEEEecccccccccc---c----ccCCCCCCceEEEec
Q 038413 57 --DRVRPLPPFEAYLEKKRIVRRAIEA-----------VEIPYTFVSANCYGAYFVN---V----LLRPFEPHDDVVVYG 116 (191)
Q Consensus 57 --~~~~~~~~~~~~~~~k~~~e~~l~~-----------~~~~~tilrp~~~~~~~~~---~----~~~~~~~~~~~~~~~ 116 (191)
.+.....|..+|..+|..+|.+++. .+++++++||+.+++++.. . +......++.+. .+
T Consensus 139 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~-~~ 217 (349)
T TIGR02622 139 GYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVI-IR 217 (349)
T ss_pred CCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeE-EC
Confidence 1111224567788899999988764 2899999999999985421 1 111111344444 45
Q ss_pred CCcceeeecchhhHHHHHHHHhcCc----ccCCceeEeecC-CCccCHHHHHHHHHHHhC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDP----RTCNRIVIYRPQ-TNIISQLELISLWEQKTG 171 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~----~~~~~~~~i~~~-~~~~t~~e~~~~~~~~~g 171 (191)
+|++.++|+|++|+|++++.++... ...++.|+++++ ++..|..|+++.+.+.++
T Consensus 218 ~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 218 NPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred CCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence 6788899999999999998877642 123579999842 268999999998888765
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-15 Score=112.77 Aligned_cols=170 Identities=18% Similarity=0.297 Sum_probs=133.9
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-C---CcccCCCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-S---EFGCEEDR- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s---~~g~~~~~- 58 (191)
+|+.+...+...+. ..|.|+|.++... +..+..|+++++..|.+++|+. | .||.....
T Consensus 64 ~di~~~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~ 143 (331)
T KOG0747|consen 64 GDIADADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDA 143 (331)
T ss_pred ccccchHHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccc
Confidence 46667777666664 6899999988642 4567899999999976999984 3 47754322
Q ss_pred ----CCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccc------cccccCCCCCCceEEEecCCcceeee
Q 038413 59 ----VRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYF------VNVLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 59 ----~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
.+.+.|..||.++|.++|..+++ .|++++++|.+..||+. +|.|.......+...+.|+|.+.+++
T Consensus 144 ~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~ 223 (331)
T KOG0747|consen 144 VVGEASLLNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSY 223 (331)
T ss_pred cccccccCCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceee
Confidence 23457889999999999999986 58999999999888853 23333223356778899999999999
Q ss_pred cchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 125 NYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+|++|+++++-.++... ..|++|+|+. ....+..|+++.+.+...+
T Consensus 224 l~veD~~ea~~~v~~Kg-~~geIYNIgt-d~e~~~~~l~k~i~eli~~ 269 (331)
T KOG0747|consen 224 LYVEDVSEAFKAVLEKG-ELGEIYNIGT-DDEMRVIDLAKDICELFEK 269 (331)
T ss_pred EeHHHHHHHHHHHHhcC-CccceeeccC-cchhhHHHHHHHHHHHHHH
Confidence 99999999999999884 4689999995 8999999999999888865
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.6e-15 Score=110.33 Aligned_cols=172 Identities=15% Similarity=0.196 Sum_probs=132.7
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCC---c-c---cCC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSE---F-G---CEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~---~-g---~~~ 56 (191)
.|++|++.+.+.++ ..|+|||+++.+. ..+..|+.++|.+.| .+-+-.|+ | | ..+
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~lVhiSTDyVFDG~~~~~Y 112 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG-ARLVHISTDYVFDGEKGGPY 112 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC-CeEEEeecceEecCCCCCCC
Confidence 48999999999997 4699999999875 356799999999999 65543443 2 2 223
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEeccccccccccccc----CCCCCCceEEEecCCcceeeecchhhHHH
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLL----RPFEPHDDVVVYGNGEAKAVFNYEEDIAK 132 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 132 (191)
.+.+...|..-|..+|...|..+++.+-.++|+|.++.++....+|. ....+++.+.+. .++..++++..|+|+
T Consensus 113 ~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv--~Dq~gsPt~~~dlA~ 190 (281)
T COG1091 113 KETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVV--DDQYGSPTYTEDLAD 190 (281)
T ss_pred CCCCCCCChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEE--CCeeeCCccHHHHHH
Confidence 44445578888889999999999999999999999999986544443 222255566665 356678999999999
Q ss_pred HHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEE
Q 038413 133 CTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177 (191)
Q Consensus 133 ~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~ 177 (191)
++..++..... .+++++.+ ...+|+-|+++.+.+..|.+.+..
T Consensus 191 ~i~~ll~~~~~-~~~yH~~~-~g~~Swydfa~~I~~~~~~~~~v~ 233 (281)
T COG1091 191 AILELLEKEKE-GGVYHLVN-SGECSWYEFAKAIFEEAGVDGEVI 233 (281)
T ss_pred HHHHHHhcccc-CcEEEEeC-CCcccHHHHHHHHHHHhCCCcccc
Confidence 99998887543 34899985 677999999999999998665444
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-15 Score=116.75 Aligned_cols=179 Identities=18% Similarity=0.180 Sum_probs=117.2
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCC---cc-c---CC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSE---FG-C---EE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~---~g-~---~~ 56 (191)
.|+.|.+.+.+.++ ..|+|||+++..+ ..+..+|+++|++.| ++-+..|+ |+ . ..
T Consensus 35 ~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~-~~li~~STd~VFdG~~~~~y 113 (286)
T PF04321_consen 35 LDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG-ARLIHISTDYVFDGDKGGPY 113 (286)
T ss_dssp S-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB
T ss_pred cCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC-CcEEEeeccEEEcCCccccc
Confidence 48899999999887 4799999998753 466789999999999 75544454 32 1 12
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEeccccccccccccc----CCCCCCceEEEecCCcceeeecchhhHHH
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLL----RPFEPHDDVVVYGNGEAKAVFNYEEDIAK 132 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 132 (191)
.+.....|...|..+|.++|+.+++..-+++|+|+++.++....++. .....++.+.++. +..+++++++|+|+
T Consensus 114 ~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~ 191 (286)
T PF04321_consen 114 TEDDPPNPLNVYGRSKLEGEQAVRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLAR 191 (286)
T ss_dssp -TTS----SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHH
Confidence 23333467788999999999999986669999999998886322222 1112566677664 55689999999999
Q ss_pred HHHHHhcCcc---cCCceeEeecCCCccCHHHHHHHHHHHhCCce-EEEEcCHHH
Q 038413 133 CTIKVINDPR---TCNRIVIYRPQTNIISQLELISLWEQKTGRSF-KRVHISEEE 183 (191)
Q Consensus 133 ~~~~~l~~~~---~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~-~~~~~~~~~ 183 (191)
++..+++... ...++|++++ ++.+|.-|+++.+.+.+|.+. .+..++.++
T Consensus 192 ~i~~l~~~~~~~~~~~Giyh~~~-~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~ 245 (286)
T PF04321_consen 192 VILELIEKNLSGASPWGIYHLSG-PERVSRYEFAEAIAKILGLDPELIKPVSSSE 245 (286)
T ss_dssp HHHHHHHHHHH-GGG-EEEE----BS-EEHHHHHHHHHHHHTHCTTEEEEESSTT
T ss_pred HHHHHHHhcccccccceeEEEec-CcccCHHHHHHHHHHHhCCCCceEEeccccc
Confidence 9999998742 3468999996 799999999999999999766 555554443
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-14 Score=113.69 Aligned_cols=163 Identities=13% Similarity=0.150 Sum_probs=115.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHc-CCccEEEc-CC---cccCC----
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVA-GNIKRFLP-SE---FGCEE---- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~-g~vkr~v~-s~---~g~~~---- 56 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|.+. + +++||. |+ ++...
T Consensus 63 ~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-~~~iv~~SS~~~~~~~~~~~~ 141 (325)
T PLN02989 63 ADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSS-VKRVILTSSMAAVLAPETKLG 141 (325)
T ss_pred CCCCCchHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEEecchhheecCCccCC
Confidence 589999999999999999999998531 34568899999885 5 788774 43 22111
Q ss_pred -----CCCCCCCC------chhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC-----C--CCCCceEEE
Q 038413 57 -----DRVRPLPP------FEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR-----P--FEPHDDVVV 114 (191)
Q Consensus 57 -----~~~~~~~~------~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~-----~--~~~~~~~~~ 114 (191)
++.....| ..+|..+|..+|+++.. .+++++++||+..++++...... . ...++..
T Consensus 142 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-- 219 (325)
T PLN02989 142 PNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-- 219 (325)
T ss_pred CCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC--
Confidence 11111112 24578899999988764 58999999999998865321100 0 0122221
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
++ ...++|+|++|+|++++.+++++.. ++.|+++ ++.+|++|+++++.+.+|
T Consensus 220 ~~--~~~r~~i~v~Dva~a~~~~l~~~~~-~~~~ni~--~~~~s~~ei~~~i~~~~~ 271 (325)
T PLN02989 220 FN--TTHHRFVDVRDVALAHVKALETPSA-NGRYIID--GPVVTIKDIENVLREFFP 271 (325)
T ss_pred CC--CcCcCeeEHHHHHHHHHHHhcCccc-CceEEEe--cCCCCHHHHHHHHHHHCC
Confidence 11 2347899999999999999988653 4578886 468999999999999998
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.2e-14 Score=111.71 Aligned_cols=178 Identities=17% Similarity=0.217 Sum_probs=129.8
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCC---------------CcccHHHHHHHHHHcCCccEEEc-CCcc-----cC--CC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYP---------------QFLDQLKIVHAIKVAGNIKRFLP-SEFG-----CE--ED 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~---------------~~~~~~~li~aa~~~g~vkr~v~-s~~g-----~~--~~ 57 (191)
||+.|...+.+|+.|+ .|+|+++.. +++++.|++++|++.| |+++|. |+.+ .. ..
T Consensus 62 ~D~~~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~ 139 (361)
T KOG1430|consen 62 GDLLDANSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIING 139 (361)
T ss_pred cchhhhhhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccC
Confidence 6899999999999999 666666532 2678999999999999 999995 4322 11 11
Q ss_pred CCCCCCCch---hhHHHHHHHHHHHHhc----CCCeEEEecccccccccccccC----CCCCCceEEEecCCcceeeecc
Q 038413 58 RVRPLPPFE---AYLEKKRIVRRAIEAV----EIPYTFVSANCYGAYFVNVLLR----PFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 58 ~~~~~~~~~---~~~~~k~~~e~~l~~~----~~~~tilrp~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
+...+.|.. +|..+|..+|+++.+. ++.++.|||..+||.+-+.... ....++.....++++...++++
T Consensus 140 ~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~ 219 (361)
T KOG1430|consen 140 DESLPYPLKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTY 219 (361)
T ss_pred CCCCCCccccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEE
Confidence 111223333 5678999999998763 3779999999999987555432 1225566777777778889999
Q ss_pred hhhHHHHHHHHh---c--CcccCCceeEeecCCCccCHHHHHHHHHHHhCCceE-EEEcCH
Q 038413 127 EEDIAKCTIKVI---N--DPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK-RVHISE 181 (191)
Q Consensus 127 ~~Dva~~~~~~l---~--~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~-~~~~~~ 181 (191)
++++|.+.+.+. . .+...|+.++|++ +.....-+.+..+.+.+|...+ .+.+|.
T Consensus 220 ~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d-~~p~~~~~~~~~l~~~lg~~~~~~~~~p~ 279 (361)
T KOG1430|consen 220 GENVAWAHILAARALLDKSPSVNGQFYFITD-DTPVRFFDFLSPLVKALGYCLPSSIKLPL 279 (361)
T ss_pred echhHHHHHHHHHHHHhcCCccCceEEEEeC-CCcchhhHHHHHHHHhcCCCCCceeecch
Confidence 998887765543 2 2446689999997 7888888888899999998877 444443
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.9e-14 Score=109.02 Aligned_cols=164 Identities=11% Similarity=0.052 Sum_probs=111.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHc-CCccEEEc-CCc---ccC-C--CC-
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVA-GNIKRFLP-SEF---GCE-E--DR- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~-g~vkr~v~-s~~---g~~-~--~~- 58 (191)
+|++|.+++.+++.++|+|+|+++... +.++.+++++|.+. + ++|+|. |+. +.. . ..
T Consensus 64 ~Dl~d~~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~-v~riV~~SS~~a~~~~~~~~~~~ 142 (297)
T PLN02583 64 VDPLDYHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDT-IEKVVFTSSLTAVIWRDDNISTQ 142 (297)
T ss_pred ecCCCHHHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEecchHheecccccCCCC
Confidence 589999999999999999999765321 45789999999886 6 899874 432 111 0 00
Q ss_pred --CCC--CCC-c------hhhHHHHHHHHHHHH----hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 59 --VRP--LPP-F------EAYLEKKRIVRRAIE----AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 59 --~~~--~~~-~------~~~~~~k~~~e~~l~----~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
... ..+ . ..|..+|..+|+++. ..+++++++||+..++........ .+. +.....+++ ..+
T Consensus 143 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~-~~~-~~~~~~~~~--~~~ 218 (297)
T PLN02583 143 KDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP-YLK-GAAQMYENG--VLV 218 (297)
T ss_pred CCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh-hhc-CCcccCccc--Ccc
Confidence 000 011 1 146678999998874 358999999999998865322111 111 111222222 467
Q ss_pred ecchhhHHHHHHHHhcCcccCCceeEeecCCCccC-HHHHHHHHHHHhCC
Q 038413 124 FNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIIS-QLELISLWEQKTGR 172 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t-~~e~~~~~~~~~g~ 172 (191)
+||++|+|++++.+++++...+ .+.++ ++.++ ..++++++.+..+.
T Consensus 219 ~v~V~Dva~a~~~al~~~~~~~-r~~~~--~~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 219 TVDVNFLVDAHIRAFEDVSSYG-RYLCF--NHIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred eEEHHHHHHHHHHHhcCcccCC-cEEEe--cCCCccHHHHHHHHHHhCCC
Confidence 9999999999999999877655 46666 34444 67899999998863
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.5e-14 Score=105.14 Aligned_cols=158 Identities=19% Similarity=0.250 Sum_probs=107.4
Q ss_pred CCCCC-HHHHHHhh-ccCcEEEEccCCCC-----------cccHHHHHHHHHHcCCccEEEc-CCcccCCCC-CCCCCC-
Q 038413 1 GELDE-HEKIVSIL-KEVDVVISTVAYPQ-----------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDR-VRPLPP- 64 (191)
Q Consensus 1 gD~~d-~~~l~~a~-~g~d~V~~~~~~~~-----------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~-~~~~~~- 64 (191)
+|+.| .+++.+++ .++|+||++++... ..+..++++++++.+ ++|+|. |+.+..... .....+
T Consensus 69 ~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~~~~ 147 (251)
T PLN00141 69 ADVTEGSDKLVEAIGDDSDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQILNPA 147 (251)
T ss_pred eeCCCCHHHHHHHhhcCCCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcccccCcc
Confidence 57887 57788888 69999999887531 125789999999999 999885 543321111 110011
Q ss_pred ------chhhHHHHHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 65 ------FEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 65 ------~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
...++.+|..+|+++++++++|+++||+++++... .+.+.+.........+|+++|+|+++..++
T Consensus 148 ~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~---------~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~ 218 (251)
T PLN00141 148 YIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPP---------TGNIVMEPEDTLYEGSISRDQVAEVAVEAL 218 (251)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCC---------CceEEECCCCccccCcccHHHHHHHHHHHh
Confidence 11234578899999999999999999998876421 111222211112235799999999999999
Q ss_pred cCcccCCceeEeec--CCCccCHHHHHHHHHH
Q 038413 139 NDPRTCNRIVIYRP--QTNIISQLELISLWEQ 168 (191)
Q Consensus 139 ~~~~~~~~~~~i~~--~~~~~t~~e~~~~~~~ 168 (191)
.+++..++.+.+.+ +....|+++++..+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 219 LCPESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred cChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 98876677777764 2345899999888764
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-13 Score=106.44 Aligned_cols=166 Identities=11% Similarity=0.149 Sum_probs=112.3
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC------------------cccHHHHHHHHHHcCCccEEEcCC---cccCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ------------------FLDQLKIVHAIKVAGNIKRFLPSE---FGCEE- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~------------------~~~~~~li~aa~~~g~vkr~v~s~---~g~~~- 56 (191)
+|+.|.+.+...++ ++|+|||+++... ..++.+++++|++.| +++++.|+ |+...
T Consensus 41 ~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~~sS~~vy~~~~~ 119 (298)
T PLN02778 41 GRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTNYATGCIFEYDDA 119 (298)
T ss_pred CccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEecceEeCCCCC
Confidence 36677777887776 7899999998541 345789999999999 98877542 43211
Q ss_pred ---------CCCCCCC-CchhhHHHHHHHHHHHHhcCCCeEEEecccccccc--c-ccccCCCCCCceEEEecCCcceee
Q 038413 57 ---------DRVRPLP-PFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYF--V-NVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 57 ---------~~~~~~~-~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~--~-~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
.+...+. |.++|..+|..+|.++.... +..++|++..++.. . ..+....+....+...+ .+
T Consensus 120 ~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~-----~s 193 (298)
T PLN02778 120 HPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIP-----NS 193 (298)
T ss_pred CCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcC-----CC
Confidence 1111112 33578899999999998643 45677776533321 1 12211111222232222 36
Q ss_pred ecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEE
Q 038413 124 FNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~ 176 (191)
++|++|+++++..++.... ++.|++++ ++.+|..|+++++.+++|.+.++
T Consensus 194 ~~yv~D~v~al~~~l~~~~--~g~yNigs-~~~iS~~el~~~i~~~~~~~~~~ 243 (298)
T PLN02778 194 MTILDELLPISIEMAKRNL--TGIYNFTN-PGVVSHNEILEMYRDYIDPSFTW 243 (298)
T ss_pred CEEHHHHHHHHHHHHhCCC--CCeEEeCC-CCcccHHHHHHHHHHHhCCCcee
Confidence 8999999999999987643 46999985 78999999999999999976543
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.5e-13 Score=102.68 Aligned_cols=180 Identities=21% Similarity=0.220 Sum_probs=132.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC------cccHHHHHHHHHHcC-CccEEEc-CCcccCCCCCCCCCCchhhHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ------FLDQLKIVHAIKVAG-NIKRFLP-SEFGCEEDRVRPLPPFEAYLEKK 72 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~------~~~~~~li~aa~~~g-~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k 72 (191)
+|+.+++++..+++|++.++++.+... .....++++++++++ .+++++. |.++.+.. ....+..+|
T Consensus 49 ~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~------~~~~~~~~~ 122 (275)
T COG0702 49 GDLRDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAA------SPSALARAK 122 (275)
T ss_pred eccCCHhHHHHHhccccEEEEEecccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCC------CccHHHHHH
Confidence 589999999999999999999887432 223456666776643 2777775 55554321 234688999
Q ss_pred HHHHHHHHhcCCCeEEEecccccccccccccCCCC-CCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 73 RIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 73 ~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
...|+.+.++|++||++|+..++.+....+..... ....+...+.+ +.++++.+|++.++...+..|...++.+.++
T Consensus 123 ~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~ 200 (275)
T COG0702 123 AAVEAALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALDAPATAGRTYELA 200 (275)
T ss_pred HHHHHHHHhcCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhcCCcccCcEEEcc
Confidence 99999999999999999976666543222111111 22222222233 7899999999999999999987788999999
Q ss_pred cCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 152 PQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 152 ~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
+ ++..+..++++.+.+..|++..+...+.......+.
T Consensus 201 g-~~~~~~~~~~~~l~~~~gr~~~~~~~~~~~~~~~~~ 237 (275)
T COG0702 201 G-PEALTLAELASGLDYTIGRPVGLIPEALAALTLALS 237 (275)
T ss_pred C-CceecHHHHHHHHHHHhCCcceeeCCcHHHHHHHhc
Confidence 6 689999999999999999999997777666655443
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-13 Score=113.03 Aligned_cols=160 Identities=18% Similarity=0.184 Sum_probs=107.6
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCC--CCCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVR--PLPP 64 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~--~~~~ 64 (191)
||+.|.+++.+++.++|+|||+++... ..++.+++++|+++| ++|||. |+.+....... ....
T Consensus 145 gDLtD~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~p~~~~~s 223 (576)
T PLN03209 145 CDLEKPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGFPAAILNL 223 (576)
T ss_pred ecCCCHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCccccchhh
Confidence 689999999999999999999987542 246799999999999 999885 65554211110 0112
Q ss_pred chhhHHHHHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcc-c
Q 038413 65 FEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR-T 143 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~ 143 (191)
...+...|..++++|.++|++|++||||++.+...... ..+.+.....+......+..+|||++++.++.+++ .
T Consensus 224 k~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-----~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as 298 (576)
T PLN03209 224 FWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-----ETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLS 298 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-----cccceeeccccccCCCccCHHHHHHHHHHHHcCchhc
Confidence 34566789999999999999999999998754211110 11222222221111235899999999999999775 6
Q ss_pred CCceeEeecCCCccCHHHHHHHHH
Q 038413 144 CNRIVIYRPQTNIISQLELISLWE 167 (191)
Q Consensus 144 ~~~~~~i~~~~~~~t~~e~~~~~~ 167 (191)
.++++.+.+ ++......+.+++.
T Consensus 299 ~~kvvevi~-~~~~p~~~~~~~~~ 321 (576)
T PLN03209 299 YCKVVEVIA-ETTAPLTPMEELLA 321 (576)
T ss_pred cceEEEEEe-CCCCCCCCHHHHHH
Confidence 789998874 33333344444443
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=103.01 Aligned_cols=166 Identities=20% Similarity=0.232 Sum_probs=121.0
Q ss_pred HHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cC---CcccCCCCCCC------C
Q 038413 8 KIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PS---EFGCEEDRVRP------L 62 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s---~~g~~~~~~~~------~ 62 (191)
-....+.++|-|||+|++.. ..++.+++..|++.| +||+ .| .||........ .
T Consensus 84 v~~pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~v 161 (350)
T KOG1429|consen 84 VVEPLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNV 161 (350)
T ss_pred chhHHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCcccccccc
Confidence 34456789999999998752 467899999999998 5665 34 27754322110 1
Q ss_pred C---CchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc--------cCCCCCCceEEEecCCcceeeecch
Q 038413 63 P---PFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL--------LRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 63 ~---~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
. |..-|...|..+|..+.+ .|++.+|.|+-..+++.+.+. ....+.++++.++|+|.+.++|.++
T Consensus 162 npigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yv 241 (350)
T KOG1429|consen 162 NPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYV 241 (350)
T ss_pred CcCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeH
Confidence 1 222355688888888765 489999999655555443221 1123478899999999999999999
Q ss_pred hhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 128 EDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
.|..+.++.+++++.. .-+++++ ++..|+.|+++++.+..|-...++.
T Consensus 242 sD~Vegll~Lm~s~~~--~pvNiGn-p~e~Tm~elAemv~~~~~~~s~i~~ 289 (350)
T KOG1429|consen 242 SDLVEGLLRLMESDYR--GPVNIGN-PGEFTMLELAEMVKELIGPVSEIEF 289 (350)
T ss_pred HHHHHHHHHHhcCCCc--CCcccCC-ccceeHHHHHHHHHHHcCCCcceee
Confidence 9999999999998743 4489996 7899999999999999975544443
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.6e-13 Score=104.13 Aligned_cols=169 Identities=16% Similarity=0.148 Sum_probs=112.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------------cccHHHHHHHHHHcCCccEEEc-CC---ccc
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~ 54 (191)
+|+.|.+.+.++++++|+|||+++... +.++.+++++|++.+.+++||. |+ ||.
T Consensus 65 ~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~ 144 (353)
T PLN02896 65 ADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTA 144 (353)
T ss_pred CCCCCHHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccc
Confidence 589999999999999999999998532 0346788999988743788874 33 542
Q ss_pred CC---------CCCC--C-------CCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC-----CC-
Q 038413 55 EE---------DRVR--P-------LPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR-----PF- 106 (191)
Q Consensus 55 ~~---------~~~~--~-------~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~-----~~- 106 (191)
.. ++.. . ..+..+|..+|..+|+++.. .+++.+++||+..++++...... ..
T Consensus 145 ~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~ 224 (353)
T PLN02896 145 KDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLS 224 (353)
T ss_pred cccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHH
Confidence 11 1110 0 01223688899999987754 58999999999888864321100 00
Q ss_pred -CCCce--EEEecCCc---ceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 107 -EPHDD--VVVYGNGE---AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 107 -~~~~~--~~~~~~g~---~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
..+.. ....+... ..++|||++|+|++++.++..+.. +..++++ ++.+|+.|+++++.+.++.
T Consensus 225 ~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~-~~~~~~~--~~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 225 PITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA-EGRYICC--VDSYDMSELINHLSKEYPC 293 (353)
T ss_pred HhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCc-CccEEec--CCCCCHHHHHHHHHHhCCC
Confidence 01111 11111111 236999999999999999987543 3445443 6789999999999999973
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.6e-13 Score=99.80 Aligned_cols=177 Identities=16% Similarity=0.194 Sum_probs=125.6
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcC----CcccCCCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPS----EFGCEEDR- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s----~~g~~~~~- 58 (191)
+|+.|.+.|++.|+ +.|.|+|.++... +-++.+++++|++++ ++.+|.| .||.+...
T Consensus 61 ~Dl~D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip 139 (343)
T KOG1371|consen 61 GDLNDAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVP 139 (343)
T ss_pred eccCCHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceee
Confidence 69999999999997 7899999998642 457899999999999 9998863 26654221
Q ss_pred ---CCCC-CCchhhHHHHHHHHHHHHhc----CCCeEEEecccccc----------------cccccccCCCC-------
Q 038413 59 ---VRPL-PPFEAYLEKKRIVRRAIEAV----EIPYTFVSANCYGA----------------YFVNVLLRPFE------- 107 (191)
Q Consensus 59 ---~~~~-~~~~~~~~~k~~~e~~l~~~----~~~~tilrp~~~~~----------------~~~~~~~~~~~------- 107 (191)
.... .|.++|.++|..+|+.+... +...+.||.-...+ +.+|...+...
T Consensus 140 ~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~ 219 (343)
T KOG1371|consen 140 ITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQ 219 (343)
T ss_pred ccCcCCCCCCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccce
Confidence 1112 37788999999999998862 44556677322111 11111111100
Q ss_pred -CCceEEEecCCcceeeecchhhHHHHHHHHhcCccc--CCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 108 -PHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 108 -~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
-+..+. ..+|+..++++++-|.|+..+.++..... ..++++++. +...+..||...++++.|+++++.-++
T Consensus 220 v~g~d~~-t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgt-g~g~~V~~lv~a~~k~~g~~~k~~~v~ 293 (343)
T KOG1371|consen 220 VVGRDYT-TIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGT-GKGSSVLELVTAFEKALGVKIKKKVVP 293 (343)
T ss_pred eecCccc-ccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecC-CCCccHHHHHHHHHHHhcCCCCccccC
Confidence 111122 22567889999999999999999998642 345888885 788999999999999999987776543
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.7e-12 Score=103.90 Aligned_cols=177 Identities=14% Similarity=0.232 Sum_probs=133.7
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCC
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPL 62 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~ 62 (191)
||+.|.+.+..++++ +|+|||+|+.-+ +-++.|+++||.++| |++||. |+ ++. .
T Consensus 309 gdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iST-----DKA--V 380 (588)
T COG1086 309 GDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLIST-----DKA--V 380 (588)
T ss_pred cccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEec-----Ccc--c
Confidence 799999999999998 999999998642 568999999999999 999985 32 221 2
Q ss_pred CCchhhHHHHHHHHHHHHhc-------CCCeEEEecccccccc---cccccCCCCCCceEEEecCCcceeeecchhhHHH
Q 038413 63 PPFEAYLEKKRIVRRAIEAV-------EIPYTFVSANCYGAYF---VNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAK 132 (191)
Q Consensus 63 ~~~~~~~~~k~~~e~~l~~~-------~~~~tilrp~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 132 (191)
+|.+-+..+|..+|+.+.+. +-.++.+|.|...+.. .|-|.....+++++++. +.+..+-|.++.|.++
T Consensus 381 ~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvT-dp~mtRyfMTI~EAv~ 459 (588)
T COG1086 381 NPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVT-DPDMTRFFMTIPEAVQ 459 (588)
T ss_pred CCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCcccc-CCCceeEEEEHHHHHH
Confidence 56777889999999998752 2567889999877642 23232211266777776 5677788999999999
Q ss_pred HHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC----Cc--eEEEEc-CHHHHHHHh
Q 038413 133 CTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG----RS--FKRVHI-SEEELVKLS 188 (191)
Q Consensus 133 ~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g----~~--~~~~~~-~~~~~~~~~ 188 (191)
.++.+....+ .|.+|-+-. |+++++.|+++.+.+..| .. ++++=+ |-|.+-+.|
T Consensus 460 LVlqA~a~~~-gGeifvldM-GepvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRpGEKl~EeL 520 (588)
T COG1086 460 LVLQAGAIAK-GGEIFVLDM-GEPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRPGEKLYEEL 520 (588)
T ss_pred HHHHHHhhcC-CCcEEEEcC-CCCeEHHHHHHHHHHHhCCCCCCCCCeEEEecCCchhhhhhh
Confidence 9999888743 466666664 699999999999999997 33 344433 666665554
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.7e-13 Score=102.10 Aligned_cols=162 Identities=15% Similarity=0.254 Sum_probs=110.6
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLP 63 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~ 63 (191)
||+.|.+.+.++|+ +.|+|||+|+.-. +.++.|++++|.++| |++||.-| .++. .+
T Consensus 61 gDvrd~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~IS----TDKA--v~ 133 (293)
T PF02719_consen 61 GDVRDKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFIS----TDKA--VN 133 (293)
T ss_dssp TSCCHHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEE----ECGC--SS
T ss_pred ecccCHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEcc----cccc--CC
Confidence 69999999999998 9999999999753 567899999999999 99998532 1111 14
Q ss_pred CchhhHHHHHHHHHHHHhc-------CCCeEEEecccccccc---cccccCCCCCCceEEEecCCcceeeecchhhHHHH
Q 038413 64 PFEAYLEKKRIVRRAIEAV-------EIPYTFVSANCYGAYF---VNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 64 ~~~~~~~~k~~~e~~l~~~-------~~~~tilrp~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~ 133 (191)
|.+-+..+|..+|+++.+. +..++++|.|...+.- +|.|.....+++++.+. +.+..+-|.++++.++.
T Consensus 134 PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT-~p~mtRffmti~EAv~L 212 (293)
T PF02719_consen 134 PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVT-DPDMTRFFMTIEEAVQL 212 (293)
T ss_dssp --SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEEC-ETT-EEEEE-HHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeC-CCCcEEEEecHHHHHHH
Confidence 6677889999999999862 3468899988777632 23332211256778876 45667889999999999
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
++.+..... .++++..-. ++++++.|+++.+.+..|.
T Consensus 213 vl~a~~~~~-~geifvl~m-g~~v~I~dlA~~~i~~~g~ 249 (293)
T PF02719_consen 213 VLQAAALAK-GGEIFVLDM-GEPVKILDLAEAMIELSGL 249 (293)
T ss_dssp HHHHHHH---TTEEEEE----TCEECCCHHHHHHHHTT-
T ss_pred HHHHHhhCC-CCcEEEecC-CCCcCHHHHHHHHHhhccc
Confidence 999887643 356666654 6899999999999999974
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.9e-11 Score=87.50 Aligned_cols=175 Identities=19% Similarity=0.189 Sum_probs=120.3
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc--CC--ccc----
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP--SE--FGC---- 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~--s~--~g~---- 54 (191)
.|+++.++..+.|+ .-..|||+++..+ +..+.|++..|.+.| |+++++ |+ |..
T Consensus 39 ~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~y 117 (315)
T KOG1431|consen 39 ADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTSY 117 (315)
T ss_pred ccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCCC
Confidence 48889888888886 5689999988653 355789999999999 998774 32 211
Q ss_pred CCCC----CCCCCCch-hhHHHHHHH----HHHHHhcCCCeEEEeccccccc---cccccc-----------CC-CCCCc
Q 038413 55 EEDR----VRPLPPFE-AYLEKKRIV----RRAIEAVEIPYTFVSANCYGAY---FVNVLL-----------RP-FEPHD 110 (191)
Q Consensus 55 ~~~~----~~~~~~~~-~~~~~k~~~----e~~l~~~~~~~tilrp~~~~~~---~~~~~~-----------~~-~~~~~ 110 (191)
+.++ ..++.|.. .|.-+|..+ ..|-.+.|-+||...|...+++ +-+... .. .....
T Consensus 118 PIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd 197 (315)
T KOG1431|consen 118 PIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTD 197 (315)
T ss_pred CCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCc
Confidence 1111 11122332 233345322 3444557999999998887763 211110 00 11345
Q ss_pred eEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCC--ccCHHHHHHHHHHHhCCceEEEE
Q 038413 111 DVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTN--IISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 111 ~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~--~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
.+.+||+|.-.++|+|.+|+|++++.+|.+-+.. +.++++. ++ .+|++|+++++.++.|.+.+.+.
T Consensus 198 ~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~v-Epiils~-ge~~EVtI~e~aeaV~ea~~F~G~l~~ 265 (315)
T KOG1431|consen 198 ELTVWGSGSPLRQFIYSDDLADLFIWVLREYEGV-EPIILSV-GESDEVTIREAAEAVVEAVDFTGKLVW 265 (315)
T ss_pred eEEEecCCChHHHHhhHhHHHHHHHHHHHhhcCc-cceEecc-CccceeEHHHHHHHHHHHhCCCceEEe
Confidence 7899999998899999999999999999986543 3455553 44 89999999999999998777664
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.5e-10 Score=86.32 Aligned_cols=176 Identities=15% Similarity=0.139 Sum_probs=112.4
Q ss_pred HHHHHHhhc-cCcEEEEccCCCC-----------------cccHHHHHHHHHH--cCCccEEEcCC----cccCCCCC--
Q 038413 6 HEKIVSILK-EVDVVISTVAYPQ-----------------FLDQLKIVHAIKV--AGNIKRFLPSE----FGCEEDRV-- 59 (191)
Q Consensus 6 ~~~l~~a~~-g~d~V~~~~~~~~-----------------~~~~~~li~aa~~--~g~vkr~v~s~----~g~~~~~~-- 59 (191)
.+.+.+... ++|+||+++|.+- +..+..|+++..+ .+ .+.+|..| ||...+..
T Consensus 46 ~~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~-P~~~isaSAvGyYG~~~~~~~t 124 (297)
T COG1090 46 WEGLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETK-PKVLISASAVGYYGHSGDRVVT 124 (297)
T ss_pred cchhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCC-CcEEEecceEEEecCCCceeee
Confidence 355666666 7999999999752 3557778887764 34 66777533 55433221
Q ss_pred CCCCCchhhHH-HHHHHHHHH---HhcCCCeEEEecccccccccccccC--CCCCCceEEEecCCcceeeecchhhHHHH
Q 038413 60 RPLPPFEAYLE-KKRIVRRAI---EAVEIPYTFVSANCYGAYFVNVLLR--PFEPHDDVVVYGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 60 ~~~~~~~~~~~-~k~~~e~~l---~~~~~~~tilrp~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~i~~~Dva~~ 133 (191)
....+...+.. -+..=|+.- ...|...+++|.|.+.+.....+.. +..+-+.---.|+|.+.++|||++|++++
T Consensus 125 E~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~ 204 (297)
T COG1090 125 EESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNA 204 (297)
T ss_pred cCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHH
Confidence 11112222222 112222222 2358899999999888742222111 11122222346789999999999999999
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHH
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELV 185 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~ 185 (191)
+..+++++. ....+|++. +.+++.+++..+++++++++... .+|.-.++
T Consensus 205 I~fll~~~~-lsGp~N~ta-P~PV~~~~F~~al~r~l~RP~~~-~vP~~~~r 253 (297)
T COG1090 205 ILFLLENEQ-LSGPFNLTA-PNPVRNKEFAHALGRALHRPAIL-PVPSFALR 253 (297)
T ss_pred HHHHHhCcC-CCCcccccC-CCcCcHHHHHHHHHHHhCCCccc-cCcHHHHH
Confidence 999999975 456788875 79999999999999999988544 44554443
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.6e-11 Score=102.01 Aligned_cols=174 Identities=10% Similarity=0.137 Sum_probs=113.6
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCC---C---------------cccHHHHHHHHHHcCCccEEEcCC---cccC--
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYP---Q---------------FLDQLKIVHAIKVAGNIKRFLPSE---FGCE-- 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~---~---------------~~~~~~li~aa~~~g~vkr~v~s~---~g~~-- 55 (191)
+|++|.+.+.+.+. +.|+|||+++.. . ..++.+|+++|++.| +++++.|+ |+..
T Consensus 412 ~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v~~Ss~~v~~~~~~ 490 (668)
T PLN02260 412 GRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMMNFATGCIFEYDAK 490 (668)
T ss_pred cccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEEEEcccceecCCcc
Confidence 47788888888886 789999999854 1 346799999999999 98877643 3311
Q ss_pred --------CCCCCCCCC-chhhHHHHHHHHHHHHhcCCCeEEEecccccccc---cccccCCCCC-CceEEEecCCccee
Q 038413 56 --------EDRVRPLPP-FEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYF---VNVLLRPFEP-HDDVVVYGNGEAKA 122 (191)
Q Consensus 56 --------~~~~~~~~~-~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~---~~~~~~~~~~-~~~~~~~~~g~~~~ 122 (191)
..+...+.| .++|..+|..+|.++... -++.++|+.+.++.. ..+|...-+. ...+.++ .
T Consensus 491 ~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp------~ 563 (668)
T PLN02260 491 HPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIP------N 563 (668)
T ss_pred cccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccceeeccC------C
Confidence 111111223 367889999999999865 355666665554321 1222211011 1122221 3
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHH
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELV 185 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~ 185 (191)
+..+++|++.++..++..+ .+++|++++ ++.+|+.|+++.+.+.++..+.+..++.+++.
T Consensus 564 ~~~~~~~~~~~~~~l~~~~--~~giyni~~-~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~ 623 (668)
T PLN02260 564 SMTVLDELLPISIEMAKRN--LRGIWNFTN-PGVVSHNEILEMYKDYIDPGFKWSNFTLEEQA 623 (668)
T ss_pred CceehhhHHHHHHHHHHhC--CCceEEecC-CCcCcHHHHHHHHHHhcCCcccccccCHHHhh
Confidence 4567888888878877643 258999996 78899999999999988533334555555543
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.6e-11 Score=108.72 Aligned_cols=179 Identities=12% Similarity=0.042 Sum_probs=119.8
Q ss_pred CHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC---cccC-------------
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCE------------- 55 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~------------- 55 (191)
+.+.+.++..++|+|||+++..+ +.++.+++++|++.+ +++|+. |+ ++..
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhhhcc
Confidence 34556667789999999998643 466899999999998 998774 33 3210
Q ss_pred ---CCCCC-----CCCCchhhHHHHHHHHHHHHh---cCCCeEEEecccccccccccccCC-----C-C-CCceEEEecC
Q 038413 56 ---EDRVR-----PLPPFEAYLEKKRIVRRAIEA---VEIPYTFVSANCYGAYFVNVLLRP-----F-E-PHDDVVVYGN 117 (191)
Q Consensus 56 ---~~~~~-----~~~~~~~~~~~k~~~e~~l~~---~~~~~tilrp~~~~~~~~~~~~~~-----~-~-~~~~~~~~~~ 117 (191)
..+.. ...+...|..+|+.+|..+.. .|++++++||+..++......... . . ........++
T Consensus 1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~ 1209 (1389)
T TIGR03443 1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPN 1209 (1389)
T ss_pred CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCC
Confidence 00000 001234588899999999865 489999999999887532211100 0 0 0111222334
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHh
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLS 188 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~ 188 (191)
+...+++++++|+|++++.++.++. .....+++++ +..+++.++++.+.+ .|.+++. ++.+++...+
T Consensus 1210 ~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~-~g~~~~~--~~~~~w~~~l 1278 (1389)
T TIGR03443 1210 INNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTG-HPRIRFNDFLGTLKT-YGYDVEI--VDYVHWRKSL 1278 (1389)
T ss_pred CCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCC-CCCCcHHHHHHHHHH-hCCCCCc--cCHHHHHHHH
Confidence 4556899999999999999988754 2345788885 678999999999976 4776544 5667776644
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.1e-11 Score=100.17 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=101.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------cccHHHHHHHHHHcCCccEEEcCC-cccCCCCCCCCCCchhhHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------FLDQLKIVHAIKVAGNIKRFLPSE-FGCEEDRVRPLPPFEAYLEKK 72 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------~~~~~~li~aa~~~g~vkr~v~s~-~g~~~~~~~~~~~~~~~~~~k 72 (191)
+|+.|.. +.+++.++|+|||+++... ..++.|++++|+++| ++.+..|+ +|. +. .+
T Consensus 47 ~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~G-vRiV~~SS~~G~---------~~-~~---- 110 (699)
T PRK12320 47 ASLRNPV-LQELAGEADAVIHLAPVDTSAPGGVGITGLAHVANAAARAG-ARLLFVSQAAGR---------PE-LY---- 110 (699)
T ss_pred ccCCCHH-HHHHhcCCCEEEEcCccCccchhhHHHHHHHHHHHHHHHcC-CeEEEEECCCCC---------Cc-cc----
Confidence 5788874 7788899999999998542 456889999999999 85333343 221 00 01
Q ss_pred HHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeec
Q 038413 73 RIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRP 152 (191)
Q Consensus 73 ~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~ 152 (191)
...|.++.+++++++++|+...++............ ..+... ....++.+||++|++++++.+++.+. +++|++++
T Consensus 111 ~~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~~r~I~-~~l~~~-~~~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~ 186 (699)
T PRK12320 111 RQAETLVSTGWAPSLVIRIAPPVGRQLDWMVCRTVA-TLLRSK-VSARPIRVLHLDDLVRFLVLALNTDR--NGVVDLAT 186 (699)
T ss_pred cHHHHHHHhcCCCEEEEeCceecCCCCcccHhHHHH-HHHHHH-HcCCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeC
Confidence 146777777889999999998888532211000000 000000 11334667999999999999998643 35999996
Q ss_pred CCCccCHHHHHHHHHHH
Q 038413 153 QTNIISQLELISLWEQK 169 (191)
Q Consensus 153 ~~~~~t~~e~~~~~~~~ 169 (191)
++.+|+.|+++++...
T Consensus 187 -~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 187 -PDTTNVVTAWRLLRSV 202 (699)
T ss_pred -CCeeEHHHHHHHHHHh
Confidence 7999999999999776
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.8e-10 Score=80.84 Aligned_cols=146 Identities=17% Similarity=0.125 Sum_probs=95.9
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------cccHHHHHHHHHHcCCccEEEc----CCcccCCCCC--CCCCCchh
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------FLDQLKIVHAIKVAGNIKRFLP----SEFGCEEDRV--RPLPPFEA 67 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------~~~~~~li~aa~~~g~vkr~v~----s~~g~~~~~~--~~~~~~~~ 67 (191)
.|+.|++++.+.+.|+|+||++.+... ......|+++.+.+| +.|++. .|.-.+.... +.+.-..+
T Consensus 48 ~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP~e 126 (211)
T COG2910 48 KDIFDLTSLASDLAGHDAVISAFGAGASDNDELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFPAE 126 (211)
T ss_pred ccccChhhhHhhhcCCceEEEeccCCCCChhHHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCchh
Confidence 489999999999999999999988752 233567899999999 999662 2222222211 11111224
Q ss_pred hHH-HHHHHH--HHHHh-cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCccc
Q 038413 68 YLE-KKRIVR--RAIEA-VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRT 143 (191)
Q Consensus 68 ~~~-~k~~~e--~~l~~-~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~ 143 (191)
|+. .+.+.+ +.|+. ..++||++.|..++.++ .......+.+..+..-..| -+.|+..|.|-+++..+++|++
T Consensus 127 y~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PG-erTg~yrlggD~ll~n~~G---~SrIS~aDYAiA~lDe~E~~~h 202 (211)
T COG2910 127 YKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPG-ERTGNYRLGGDQLLVNAKG---ESRISYADYAIAVLDELEKPQH 202 (211)
T ss_pred HHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCc-cccCceEeccceEEEcCCC---ceeeeHHHHHHHHHHHHhcccc
Confidence 443 333333 44554 46999999999999874 3222222233333332233 4789999999999999999998
Q ss_pred CCceeEee
Q 038413 144 CNRIVIYR 151 (191)
Q Consensus 144 ~~~~~~i~ 151 (191)
.++.|.+.
T Consensus 203 ~rqRftv~ 210 (211)
T COG2910 203 IRQRFTVA 210 (211)
T ss_pred cceeeeec
Confidence 88887764
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.4e-09 Score=90.98 Aligned_cols=171 Identities=15% Similarity=0.173 Sum_probs=113.6
Q ss_pred CCCCCH------HHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC--
Q 038413 1 GELDEH------EKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE-- 56 (191)
Q Consensus 1 gD~~d~------~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~-- 56 (191)
||+.++ +.+..+.+++|+|||+|+... +.++.+++++|++.+.+++|+. |+ ||...
T Consensus 199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~ 278 (605)
T PLN02503 199 GNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGR 278 (605)
T ss_pred eeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCe
Confidence 577775 355555678999999998653 4678999999998743788774 32 33211
Q ss_pred -CC--CC--C--------------------------------C----------------------CC-chhhHHHHHHHH
Q 038413 57 -DR--VR--P--------------------------------L----------------------PP-FEAYLEKKRIVR 76 (191)
Q Consensus 57 -~~--~~--~--------------------------------~----------------------~~-~~~~~~~k~~~e 76 (191)
.+ .+ . . .+ ...|.-+|..+|
T Consensus 279 i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE 358 (605)
T PLN02503 279 IMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGE 358 (605)
T ss_pred eeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHH
Confidence 00 00 0 0 00 123456788899
Q ss_pred HHHHh--cCCCeEEEecccccc--------cccc--cccC--CCCCCceEE-EecCCcceeeecchhhHHHHHHHHhcC-
Q 038413 77 RAIEA--VEIPYTFVSANCYGA--------YFVN--VLLR--PFEPHDDVV-VYGNGEAKAVFNYEEDIAKCTIKVIND- 140 (191)
Q Consensus 77 ~~l~~--~~~~~tilrp~~~~~--------~~~~--~~~~--~~~~~~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~- 140 (191)
+.+.+ .+++.+|+||+.+.. |... .... .....+.+. ++++++...+.|.+|.++++++.+...
T Consensus 359 ~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~ 438 (605)
T PLN02503 359 MVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKH 438 (605)
T ss_pred HHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhh
Confidence 98876 379999999987632 2111 0110 111334444 677888999999999999998888432
Q ss_pred c---ccCCceeEeecCC--CccCHHHHHHHHHHHhCC
Q 038413 141 P---RTCNRIVIYRPQT--NIISQLELISLWEQKTGR 172 (191)
Q Consensus 141 ~---~~~~~~~~i~~~~--~~~t~~e~~~~~~~~~g~ 172 (191)
+ ....++|++++ + +++++.++++.+.+....
T Consensus 439 ~~~~~~~~~vYn~ts-~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 439 GGAAKPEINVYQIAS-SVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred hcccCCCCCEEEeCC-CCCCCeEHHHHHHHHHHHHhh
Confidence 2 12368999985 6 889999999999886653
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.3e-09 Score=83.36 Aligned_cols=132 Identities=16% Similarity=0.115 Sum_probs=85.7
Q ss_pred cCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCC---chhhHHHHHHHHHH
Q 038413 15 EVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPP---FEAYLEKKRIVRRA 78 (191)
Q Consensus 15 g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~---~~~~~~~k~~~e~~ 78 (191)
+..+++.+++..+ ..+++|+++||+.+| |+|++. ++++....... .+. ......+|..++++
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~~-~~~~~~~~~~~~~k~~~e~~ 230 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQP-PNILLLNGLVLKAKLKAEKF 230 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCCC-chhhhhhhhhhHHHHhHHHH
Confidence 4456666665432 356899999999999 999885 56654333221 111 22345789999999
Q ss_pred HHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCC-ceeEee
Q 038413 79 IEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCN-RIVIYR 151 (191)
Q Consensus 79 l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~-~~~~i~ 151 (191)
++++|++|||||++.+..+......... .+..... .++.+--.|...|+|++++.++.++...+ ++.++.
T Consensus 231 ~~~Sgl~ytiIR~g~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v 301 (411)
T KOG1203|consen 231 LQDSGLPYTIIRPGGLEQDTGGQREVVV-DDEKELL--TVDGGAYSISRLDVAELVAKALLNEAATFKKVVELV 301 (411)
T ss_pred HHhcCCCcEEEeccccccCCCCcceecc-cCccccc--cccccceeeehhhHHHHHHHHHhhhhhccceeEEee
Confidence 9999999999999998875433221111 1111111 12221246889999999999999986444 666655
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=98.98 E-value=2e-09 Score=81.28 Aligned_cols=133 Identities=17% Similarity=0.154 Sum_probs=67.9
Q ss_pred CCCCCH------HHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC-cc--cCCCC
Q 038413 1 GELDEH------EKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE-FG--CEEDR 58 (191)
Q Consensus 1 gD~~d~------~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~-~g--~~~~~ 58 (191)
||+.++ +.+....+.+|+|||+++..+ +.++.++++.|.+.+ .++|+. |+ +- .....
T Consensus 67 GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~ 145 (249)
T PF07993_consen 67 GDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGT 145 (249)
T ss_dssp --TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT
T ss_pred ccccccccCCChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCc
Confidence 567653 456666679999999998764 578899999999777 667663 32 11 11100
Q ss_pred C-------------CCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC-CC---------CCCce
Q 038413 59 V-------------RPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR-PF---------EPHDD 111 (191)
Q Consensus 59 ~-------------~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~-~~---------~~~~~ 111 (191)
. ........|..+|+.+|+.+++ .|++++|+|||...+........ .. ...+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~ 225 (249)
T PF07993_consen 146 IEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGA 225 (249)
T ss_dssp --SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-E
T ss_pred ccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCC
Confidence 0 0012234788999999999986 29999999999888732111110 00 01222
Q ss_pred EE-EecCCcceeeecchhhHHHHH
Q 038413 112 VV-VYGNGEAKAVFNYEEDIAKCT 134 (191)
Q Consensus 112 ~~-~~~~g~~~~~~i~~~Dva~~~ 134 (191)
++ .++..+...+++.+|.+|+++
T Consensus 226 ~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 226 FPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp EES-SB---TT--EEEHHHHHHHH
T ss_pred cccccCCCCceEeEECHHHHHhhC
Confidence 22 444445568999999999874
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.7e-08 Score=77.18 Aligned_cols=164 Identities=18% Similarity=0.208 Sum_probs=102.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|+|||+++... +.+..++++++ ++.+ .+++|.
T Consensus 55 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ 133 (276)
T PRK06482 55 LDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQV 133 (276)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58899888877664 4799999998532 23456677775 6667 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC---CCCCce-----EEE
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP---FEPHDD-----VVV 114 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~---~~~~~~-----~~~ 114 (191)
|+.+.... ..+...|..+|..++.+++. .|++++++|||.+...+.+..... ...... ...
T Consensus 134 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (276)
T PRK06482 134 SSEGGQIA----YPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRA 209 (276)
T ss_pred cCcccccC----CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHH
Confidence 55432111 12345677899988876642 589999999998754332221100 000000 000
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
...+. ...+.+.+|++++++.++..+.. +..+++++ ++..+..|+++.+.+.++.
T Consensus 210 ~~~~~-~~~~~d~~~~~~a~~~~~~~~~~-~~~~~~g~-~~~~~~~~~~~~~~~~~~~ 264 (276)
T PRK06482 210 LADGS-FAIPGDPQKMVQAMIASADQTPA-PRRLTLGS-DAYASIRAALSERLAALEA 264 (276)
T ss_pred Hhhcc-CCCCCCHHHHHHHHHHHHcCCCC-CeEEecCh-HHHHHHHHHHHHHHHHHHH
Confidence 01111 11236899999999999987643 45588885 7888888888888777753
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4e-08 Score=75.15 Aligned_cols=164 Identities=12% Similarity=0.149 Sum_probs=99.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|+|||+++... +.+ ...++..+++.+ .+++|.
T Consensus 56 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~v 134 (275)
T PRK08263 56 LDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQI 134 (275)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 48888888877654 4699999998642 122 234444556777 777764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEeccccccccccc-ccCC-CC-CCceE-EEecCC
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNV-LLRP-FE-PHDDV-VVYGNG 118 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~-~~~~-~~-~~~~~-~~~~~g 118 (191)
|+.+..... .....|..+|...+.+.+ ..|+++++++||.+....... .... .. ....+ ......
T Consensus 135 sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (275)
T PRK08263 135 SSIGGISAF----PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ 210 (275)
T ss_pred cChhhcCCC----CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH
Confidence 432221111 123457778887765543 258999999999877643321 1100 00 00000 001111
Q ss_pred cceeee-cchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHh
Q 038413 119 EAKAVF-NYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKT 170 (191)
Q Consensus 119 ~~~~~~-i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~ 170 (191)
.....+ ++.+|+|++++.+++.+...++.+...+ .+.+++.++.+.+.+..
T Consensus 211 ~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 262 (275)
T PRK08263 211 WSERSVDGDPEAAAEALLKLVDAENPPLRLFLGSG-VLDLAKADYERRLATWE 262 (275)
T ss_pred HHhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCch-HHHHHHHHHHHHHHHHH
Confidence 112345 8899999999999998765556555543 57899999999998854
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=9e-08 Score=71.62 Aligned_cols=145 Identities=10% Similarity=0.099 Sum_probs=89.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++ ++.+ +++++.
T Consensus 63 ~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~ 141 (249)
T PRK12825 63 ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNI 141 (249)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58889998887775 4699999998432 12233444444 6777 888874
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .+...|..+|...+.+++ ..++.++++|||.++++............. .. .....
T Consensus 142 SS~~~~~~~----~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~---~~--~~~~~ 212 (249)
T PRK12825 142 SSVAGLPGW----PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK---DA--ETPLG 212 (249)
T ss_pred CccccCCCC----CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh---hc--cCCCC
Confidence 443222111 123456677766655443 358999999999999865433211110100 00 11112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
.+++.+|+++++..++.++. ..++.+++++ +..
T Consensus 213 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~-g~~ 247 (249)
T PRK12825 213 RSGTPEDIARAVAFLCSDASDYITGQVIEVTG-GVD 247 (249)
T ss_pred CCcCHHHHHHHHHHHhCccccCcCCCEEEeCC-CEe
Confidence 37899999999999997653 3489999985 443
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=6.2e-08 Score=73.29 Aligned_cols=147 Identities=12% Similarity=0.099 Sum_probs=91.6
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------ccc----HHHHHHHH-HHcCCccEEEc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLD----QLKIVHAI-KVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~----~~~li~aa-~~~g~vkr~v~ 49 (191)
+|++|.+++.++++. .|+|||+++... +.+ +.++++++ ++.+ +++++.
T Consensus 63 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~ 141 (262)
T PRK13394 63 MDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIY 141 (262)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEE
Confidence 588999988877653 799999998632 112 56678888 6777 888774
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCC-CC------CceEEE
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPF-EP------HDDVVV 114 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~-~~------~~~~~~ 114 (191)
|+....... .+...|..+|...+.+++. .++..+++|||++.+.......... .. .....+
T Consensus 142 ~ss~~~~~~~----~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (262)
T PRK13394 142 MGSVHSHEAS----PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKV 217 (262)
T ss_pred EcchhhcCCC----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHH
Confidence 443221111 1233566788777665542 4788999999988775432211000 00 000012
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
++.+.....+++++|+++++..++..+.. .++.+.+.+
T Consensus 218 ~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~ 257 (262)
T PRK13394 218 MLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSH 257 (262)
T ss_pred HhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCC
Confidence 22344456899999999999999986532 267777764
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.7e-08 Score=73.22 Aligned_cols=162 Identities=10% Similarity=0.141 Sum_probs=98.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHH----cCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKV----AGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~----~g~vkr~v~ 49 (191)
+|+.|.+++.++++ +.|++||+++... ..+..++++++.+ .+ -.+++.
T Consensus 65 ~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~ 143 (276)
T PRK05875 65 ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVG 143 (276)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 48889888887775 5799999997421 1223345554443 33 346663
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceE-EEecCCcc
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDV-VVYGNGEA 120 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~ 120 (191)
|+....... .+...|..+|..++.+++. .++.++.++||++.......... .... .-+.....
T Consensus 144 ~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~ 215 (276)
T PRK05875 144 ISSIAASNTH----RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE----SPELSADYRACTP 215 (276)
T ss_pred EechhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc----CHHHHHHHHcCCC
Confidence 432221111 2245678899888888763 47889999999876543222110 0000 00001111
Q ss_pred eeeecchhhHHHHHHHHhcCcccC--CceeEeecCCCcc----CHHHHHHHHHHHhCC
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRTC--NRIVIYRPQTNII----SQLELISLWEQKTGR 172 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~~--~~~~~i~~~~~~~----t~~e~~~~~~~~~g~ 172 (191)
...+++++|+|+++..++.++... ++.+++++ ++.+ +..|+++.+-+..|.
T Consensus 216 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 216 LPRVGEVEDVANLAMFLLSDAASWITGQVINVDG-GHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECC-CeeccCCccHHHHHHHHhhHHHH
Confidence 123577999999999999886533 78899985 6776 777887777666554
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.7e-08 Score=69.65 Aligned_cols=89 Identities=16% Similarity=0.201 Sum_probs=69.7
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhh
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAY 68 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~ 68 (191)
|...-+.+..++.|.|+.|++.+... -+....+.++||+.| ||+|++ ||.|.+.++ ...|
T Consensus 70 Df~Kl~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~sS------rFlY 142 (238)
T KOG4039|consen 70 DFSKLSQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPSS------RFLY 142 (238)
T ss_pred chHHHHHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCccc------ceee
Confidence 33445667778889999999998653 356778899999999 999885 777776433 2357
Q ss_pred HHHHHHHHHHHHhcCCC-eEEEeccccccc
Q 038413 69 LEKKRIVRRAIEAVEIP-YTFVSANCYGAY 97 (191)
Q Consensus 69 ~~~k~~~e~~l~~~~~~-~tilrp~~~~~~ 97 (191)
..-|.++|+-+.+.+++ ++|+|||+....
T Consensus 143 ~k~KGEvE~~v~eL~F~~~~i~RPG~ll~~ 172 (238)
T KOG4039|consen 143 MKMKGEVERDVIELDFKHIIILRPGPLLGE 172 (238)
T ss_pred eeccchhhhhhhhccccEEEEecCcceecc
Confidence 78899999999999886 889999987764
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.4e-07 Score=71.04 Aligned_cols=147 Identities=11% Similarity=0.171 Sum_probs=85.6
Q ss_pred CCCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++ .+.|+|||+++... ..+. ..+++++++.+ ++++|.
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ 135 (255)
T TIGR01963 57 ADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINI 135 (255)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 5888988665544 45799999997532 1122 23444456777 888774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEE-------Ee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV-------VY 115 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~-------~~ 115 (191)
|+....... .....|..+|..++.+++. .+++++.+||+.++++................ ..
T Consensus 136 ss~~~~~~~----~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
T TIGR01963 136 ASAHGLVAS----PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVM 211 (255)
T ss_pred cchhhcCCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHH
Confidence 332111111 1123466677766655532 48999999999988764322111000000000 01
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+....++++++|+|++++.++.++. ..++.+++.+
T Consensus 212 ~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~ 250 (255)
T TIGR01963 212 LPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG 250 (255)
T ss_pred HccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence 123344679999999999999998752 2367888874
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-07 Score=70.38 Aligned_cols=147 Identities=11% Similarity=0.072 Sum_probs=89.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+ ..+++.++++.+ +++||.
T Consensus 60 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~i 138 (258)
T PRK12429 60 MDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINM 138 (258)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEE
Confidence 58899998888775 5799999997532 122 466777777788 888874
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCC-ce------EEEe
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPH-DD------VVVY 115 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~-~~------~~~~ 115 (191)
|+....... .+...|..+|...+.+.+ ..++.++.++||++.++............ +. ...+
T Consensus 139 ss~~~~~~~----~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (258)
T PRK12429 139 ASVHGLVGS----AGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVL 214 (258)
T ss_pred cchhhccCC----CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHH
Confidence 432211111 123456667776664443 24788999999998875432211100000 00 0011
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+.......+++++|+|+++..++..+. ..++.+.+.+
T Consensus 215 ~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~ 253 (258)
T PRK12429 215 LPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDG 253 (258)
T ss_pred hccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCC
Confidence 122233579999999999999987643 2367787763
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.8e-07 Score=68.59 Aligned_cols=171 Identities=11% Similarity=0.111 Sum_probs=106.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... + .....++..+++.+ ..+++.
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~i 135 (273)
T PRK07825 57 LDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNV 135 (273)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEE
Confidence 58899888776653 4699999998532 0 11244566667777 778763
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHH-------HHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRA-------IEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~-------l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|..++.+ +..+|+.+++++||++........ .+....
T Consensus 136 sS~~~~~~~----~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~--------------~~~~~~ 197 (273)
T PRK07825 136 ASLAGKIPV----PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT--------------GGAKGF 197 (273)
T ss_pred cCccccCCC----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc--------------ccccCC
Confidence 443211111 1233566788766544 334689999999998765432110 011123
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeec---CCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRP---QTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~---~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
.+++.+|+|+.++.++.++........... ....+....+.+.+.+..|....+...+.++....+.+
T Consensus 198 ~~~~~~~va~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (273)
T PRK07825 198 KNVEPEDVAAAIVGTVAKPRPEVRVPRALGPLAQAQRLLPRRVREALNRLLGGDRVFLDVDTAARAAYERR 268 (273)
T ss_pred CCCCHHHHHHHHHHHHhCCCCEEeccHHHHHHHHHHHhCcHHHHHHHHHHhcccceeechhhHHHHHHHhh
Confidence 578999999999999987642110000000 01345556888889999998887888888887776654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.3e-07 Score=70.05 Aligned_cols=137 Identities=13% Similarity=0.088 Sum_probs=83.2
Q ss_pred CCCCCHHHHHHhhc-cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEEc-CCcccC
Q 038413 1 GELDEHEKIVSILK-EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFLP-SEFGCE 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~-g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v~-s~~g~~ 55 (191)
+|+.|.+++.+++. ++|+|||+++... . ....+++.++++.+ .+++|. |+.+..
T Consensus 58 ~D~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~ 136 (257)
T PRK09291 58 LDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGL 136 (257)
T ss_pred eeCCCHHHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhc
Confidence 58899999999887 8999999988532 0 12345667777788 788774 443211
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccC---CCCCCc-eEEEecCCcceeee
Q 038413 56 EDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLR---PFEPHD-DVVVYGNGEAKAVF 124 (191)
Q Consensus 56 ~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~---~~~~~~-~~~~~~~g~~~~~~ 124 (191)
... .....|..+|..++.+.+ ..|++++.+|||++..++...... ...... ...-...+..+.++
T Consensus 137 ~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (257)
T PRK09291 137 ITG----PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQ 212 (257)
T ss_pred cCC----CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccC
Confidence 111 123457778888876543 368999999999987654221110 000000 00001112233456
Q ss_pred cchhhHHHHHHHHhcCcc
Q 038413 125 NYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~ 142 (191)
++.+|+++.++.++.++.
T Consensus 213 ~~~~~~~~~~~~~l~~~~ 230 (257)
T PRK09291 213 FDPQEMIDAMVEVIPADT 230 (257)
T ss_pred CCHHHHHHHHHHHhcCCC
Confidence 788999998888887654
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1e-06 Score=65.60 Aligned_cols=138 Identities=14% Similarity=0.056 Sum_probs=85.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++ ++.+ +++++.
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ 139 (239)
T PRK12828 61 IDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNI 139 (239)
T ss_pred eecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 48888888877765 5899999987531 12234555554 4566 788774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .+...|..+|...+.+++ +.++.+..++||++.+...... .+. ....
T Consensus 140 sS~~~~~~~----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~-----------~~~--~~~~ 202 (239)
T PRK12828 140 GAGAALKAG----PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD-----------MPD--ADFS 202 (239)
T ss_pred CchHhccCC----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc-----------CCc--hhhh
Confidence 443221111 123356667776655553 2589999999998877521110 010 1112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
.+++.+|+|+++..++.++. ..++.+.+.+ ++.+
T Consensus 203 ~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g-~~~~ 238 (239)
T PRK12828 203 RWVTPEQIAAVIAFLLSDEAQAITGASIPVDG-GVAL 238 (239)
T ss_pred cCCCHHHHHHHHHHHhCcccccccceEEEecC-CEeC
Confidence 37899999999999998753 2378888874 4443
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.63 E-value=2e-06 Score=64.83 Aligned_cols=170 Identities=18% Similarity=0.222 Sum_probs=113.8
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCc--cEEE-cCC---cccCCC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNI--KRFL-PSE---FGCEED 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~v--kr~v-~s~---~g~~~~ 57 (191)
||++|...|.++++ ..|-|||+++... ..++.+|++|.+.-| - -||. .|+ ||.-..
T Consensus 62 gDLtD~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~~~~rfYQAStSE~fG~v~~ 140 (345)
T COG1089 62 GDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG-EKKTRFYQASTSELYGLVQE 140 (345)
T ss_pred ccccchHHHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhC-CcccEEEecccHHhhcCccc
Confidence 79999999999997 5699999998753 246799999999877 4 2454 232 664222
Q ss_pred ----CCCCCCCchhhHHHHHHHH----HHHHhcCCCeEEEeccccccc---c-ccccc---------CCCCCCceEEEec
Q 038413 58 ----RVRPLPPFEAYLEKKRIVR----RAIEAVEIPYTFVSANCYGAY---F-VNVLL---------RPFEPHDDVVVYG 116 (191)
Q Consensus 58 ----~~~~~~~~~~~~~~k~~~e----~~l~~~~~~~tilrp~~~~~~---~-~~~~~---------~~~~~~~~~~~~~ 116 (191)
+..+..|.+||..+|.-+- .|=++.|+-.+. |..+.. + ...|. .+......-...|
T Consensus 141 ~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~Acn---GILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lG 217 (345)
T COG1089 141 IPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACN---GILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLG 217 (345)
T ss_pred CccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeec---ceeecCCCCCCccceehHHHHHHHHHHHccccceEEec
Confidence 2233568889988876443 333334543221 111110 0 00110 1111222334567
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEE
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~ 177 (191)
+-+.++||-+..|.++++-.+|+.++ ...|.++. ++.-|.+|++++.-+..|.++..+
T Consensus 218 NldAkRDWG~A~DYVe~mwlmLQq~~--PddyViAT-g~t~sVrefv~~Af~~~g~~l~w~ 275 (345)
T COG1089 218 NLDAKRDWGHAKDYVEAMWLMLQQEE--PDDYVIAT-GETHSVREFVELAFEMVGIDLEWE 275 (345)
T ss_pred cccccccccchHHHHHHHHHHHccCC--CCceEEec-CceeeHHHHHHHHHHHcCceEEEe
Confidence 88999999999999999888888765 46777885 899999999999999999877643
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.8e-07 Score=67.97 Aligned_cols=144 Identities=13% Similarity=0.092 Sum_probs=86.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|++|++++.++++ +.|+|||+++... ..+..+++++ +++.+ .++||.
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~ 139 (250)
T PRK08063 61 ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISL 139 (250)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 58899998888776 4799999987532 1123334444 44455 668774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .+...|..+|..++.+++. .|+.++.++||++.......+.. ...............
T Consensus 140 sS~~~~~~~----~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~ 212 (250)
T PRK08063 140 SSLGSIRYL----ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPN---REELLEDARAKTPAG 212 (250)
T ss_pred cchhhccCC----CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccC---chHHHHHHhcCCCCC
Confidence 543322111 1234577889988888653 57899999999887654322110 000000000000112
Q ss_pred eecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
.+++.+|+|+++..++.++.. .++.+.+.+
T Consensus 213 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g 244 (250)
T PRK08063 213 RMVEPEDVANAVLFLCSPEADMIRGQTIIVDG 244 (250)
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence 468899999999999987542 377788874
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=7.1e-07 Score=67.11 Aligned_cols=146 Identities=10% Similarity=0.142 Sum_probs=86.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+ ...++.++++.+ .++++.
T Consensus 60 ~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ 138 (252)
T PRK06138 60 GDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNT 138 (252)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 58999999888765 5899999998532 111 244566667777 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|...+.+++. .++.++.++||++.+...............+........+.
T Consensus 139 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (252)
T PRK06138 139 ASQLALAGG----RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPM 214 (252)
T ss_pred CChhhccCC----CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCC
Confidence 443221111 1234577788877766543 38999999999887654322211000000000000111122
Q ss_pred -eecchhhHHHHHHHHhcCccc--CCceeEee
Q 038413 123 -VFNYEEDIAKCTIKVINDPRT--CNRIVIYR 151 (191)
Q Consensus 123 -~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~ 151 (191)
.+++.+|+|+++..++.++.. -+..+.+.
T Consensus 215 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~ 246 (252)
T PRK06138 215 NRFGTAEEVAQAALFLASDESSFATGTTLVVD 246 (252)
T ss_pred CCCcCHHHHHHHHHHHcCchhcCccCCEEEEC
Confidence 378899999999999988642 25556665
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=7.7e-07 Score=67.22 Aligned_cols=159 Identities=11% Similarity=0.054 Sum_probs=96.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHH----HHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIV----HAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li----~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++. +.|+|||+++... ..+..+++ ..+++.+ ..+++.
T Consensus 56 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ 134 (257)
T PRK07074 56 CDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNI 134 (257)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEE
Confidence 58889998887775 4799999997532 11223333 4445566 567664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEE-ecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV-YGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~ 121 (191)
|+..... .. ....|..+|...+.+++. .|+.++.++||++.+........ ....+.- ...+...
T Consensus 135 sS~~~~~-~~----~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~ 206 (257)
T PRK07074 135 GSVNGMA-AL----GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA---ANPQVFEELKKWYPL 206 (257)
T ss_pred cchhhcC-CC----CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc---cChHHHHHHHhcCCC
Confidence 3321111 11 112466788877766553 37888999999876643211000 0000000 0012223
Q ss_pred eeecchhhHHHHHHHHhcCc-c-cCCceeEeecCCCccCHHHHHHHHHHH
Q 038413 122 AVFNYEEDIAKCTIKVINDP-R-TCNRIVIYRPQTNIISQLELISLWEQK 169 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~~~~~~~t~~e~~~~~~~~ 169 (191)
.++++++|+++++..++.++ . ..++.+.+.+ +...+..||++.+.+.
T Consensus 207 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~-g~~~~~~~~~~~~~~~ 255 (257)
T PRK07074 207 QDFATPDDVANAVLFLASPAARAITGVCLPVDG-GLTAGNREMARTLTLE 255 (257)
T ss_pred CCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCC-CcCcCChhhhhhhccc
Confidence 57899999999999999764 2 2367788885 7889999999887653
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.7e-06 Score=64.95 Aligned_cols=146 Identities=13% Similarity=0.137 Sum_probs=85.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cc----cHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FL----DQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~----~~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ..|+|||+++... .. ...++++++++.+ .++||.
T Consensus 60 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~ 138 (251)
T PRK07231 60 ADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVN 138 (251)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 58899999988775 4699999998521 11 1345556666677 778774
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+.+..... .+...|..+|...+.+.+. .++.++.++||++................. .........
T Consensus 139 ~sS~~~~~~~----~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~-~~~~~~~~~ 213 (251)
T PRK07231 139 VASTAGLRPR----PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENR-AKFLATIPL 213 (251)
T ss_pred EcChhhcCCC----CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHH-HHHhcCCCC
Confidence 443322111 1234566778776655542 378999999998866432221110000000 000011112
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+++++|+|++++.++.++. . .++.+.+.|
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g 246 (251)
T PRK07231 214 GRLGTPEDIANAALFLASDEASWITGVTLVVDG 246 (251)
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence 356899999999999997653 2 256667763
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.2e-06 Score=65.73 Aligned_cols=152 Identities=15% Similarity=0.184 Sum_probs=91.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------cccHHHHHHHHHHcC-CccEEE-cCCcccCC-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------FLDQLKIVHAIKVAG-NIKRFL-PSEFGCEE-D 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g-~vkr~v-~s~~g~~~-~ 57 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++.+.- .-.++| .|+.+... .
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~ 142 (248)
T PRK07806 63 ADLTDEESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP 142 (248)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc
Confidence 58999998887765 5899999987531 345678888887642 023555 34432211 1
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhH
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDI 130 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dv 130 (191)
.........+|..+|..+|.+++. .++.+++++|+...++....+.... ..+.+ .........+++++|+
T Consensus 143 ~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~dv 219 (248)
T PRK07806 143 TVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRL-NPGAI--EARREAAGKLYTVSEF 219 (248)
T ss_pred cccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccC-CHHHH--HHHHhhhcccCCHHHH
Confidence 101111134677899999988764 4788888988876554322211100 00000 0000011368999999
Q ss_pred HHHHHHHhcCcccCCceeEeecCCCc
Q 038413 131 AKCTIKVINDPRTCNRIVIYRPQTNI 156 (191)
Q Consensus 131 a~~~~~~l~~~~~~~~~~~i~~~~~~ 156 (191)
|++++.+++++...++.++++| ++.
T Consensus 220 a~~~~~l~~~~~~~g~~~~i~~-~~~ 244 (248)
T PRK07806 220 AAEVARAVTAPVPSGHIEYVGG-ADY 244 (248)
T ss_pred HHHHHHHhhccccCccEEEecC-ccc
Confidence 9999999997655688899985 443
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.6e-06 Score=65.11 Aligned_cols=144 Identities=13% Similarity=0.087 Sum_probs=86.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ .+|+|||+++... ..+..++++++ ++.+ .++++.
T Consensus 62 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ 140 (251)
T PRK12826 62 VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLT 140 (251)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999999888875 5799999987542 12234455554 5566 777764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+.. ... ..+...|..+|..++.+++. .++++++++|+.+.++........ .............
T Consensus 141 ss~~~~-~~~--~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~ 213 (251)
T PRK12826 141 SSVAGP-RVG--YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA----QWAEAIAAAIPLG 213 (251)
T ss_pred echHhh-ccC--CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch----HHHHHHHhcCCCC
Confidence 432221 000 12234566788777666543 489999999999887543221110 0000000011012
Q ss_pred eecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
.+++++|+|.++..++.++.. .++.+.+.+
T Consensus 214 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 245 (251)
T PRK12826 214 RLGEPEDIAAAVLFLASDEARYITGQTLPVDG 245 (251)
T ss_pred CCcCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence 578999999999998876532 378888874
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.3e-06 Score=64.16 Aligned_cols=172 Identities=11% Similarity=0.063 Sum_probs=116.6
Q ss_pred CCCCHHHHHHhhc--cCcEEEEccCC------C--------CcccHHHHHHHHHHcCCccEEEcCCcc---cCCCCCCC-
Q 038413 2 ELDEHEKIVSILK--EVDVVISTVAY------P--------QFLDQLKIVHAIKVAGNIKRFLPSEFG---CEEDRVRP- 61 (191)
Q Consensus 2 D~~d~~~l~~a~~--g~d~V~~~~~~------~--------~~~~~~~li~aa~~~g~vkr~v~s~~g---~~~~~~~~- 61 (191)
|+.|...|.+..- ..|-+||..+. . ++++..|+++.|++++ .|-||+|..| .+...-+.
T Consensus 95 DILD~K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iFVPSTIGAFGPtSPRNPTP 173 (366)
T KOG2774|consen 95 DILDQKSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVFVPSTIGAFGPTSPRNPTP 173 (366)
T ss_pred hhhccccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEeecccccccCCCCCCCCCC
Confidence 6777778877763 56888876432 1 2678899999999999 9999998644 32221110
Q ss_pred ----CCCchhhHHHHHHHHHH---HH-hcCCCeEEEecccccccccccccC---------CCCCCceEEEecCCcceeee
Q 038413 62 ----LPPFEAYLEKKRIVRRA---IE-AVEIPYTFVSANCYGAYFVNVLLR---------PFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 62 ----~~~~~~~~~~k~~~e~~---l~-~~~~~~tilrp~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~ 124 (191)
..|..-|..+|.-+|-. .. .-|+++..+|....+.+-.|.-+. ..+.+++...+-..+.+.++
T Consensus 174 dltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpm 253 (366)
T KOG2774|consen 174 DLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPM 253 (366)
T ss_pred CeeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCce
Confidence 12444466677665532 22 248888888855555432222110 12255666666667788999
Q ss_pred cchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhC-CceEE
Q 038413 125 NYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTG-RSFKR 176 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g-~~~~~ 176 (191)
.|..|.-+.++..|..+. -..++|++. +-..|..|+++.+.+... .++.+
T Consensus 254 my~~dc~~~~~~~~~a~~~~lkrr~ynvt--~~sftpee~~~~~~~~~p~~~i~y 306 (366)
T KOG2774|consen 254 MYDTDCMASVIQLLAADSQSLKRRTYNVT--GFSFTPEEIADAIRRVMPGFEIDY 306 (366)
T ss_pred eehHHHHHHHHHHHhCCHHHhhhheeeec--eeccCHHHHHHHHHhhCCCceeec
Confidence 999999999999988663 347889998 699999999999999884 44444
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=8e-07 Score=64.92 Aligned_cols=127 Identities=18% Similarity=0.035 Sum_probs=85.2
Q ss_pred HHHHhhccCcEEEEccCCCC---------cccHHHHHHHHHHcCCccEEEc-CC--cccCCCCCCCCCCchhhHHHHHHH
Q 038413 8 KIVSILKEVDVVISTVAYPQ---------FLDQLKIVHAIKVAGNIKRFLP-SE--FGCEEDRVRPLPPFEAYLEKKRIV 75 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~---------~~~~~~li~aa~~~g~vkr~v~-s~--~g~~~~~~~~~~~~~~~~~~k~~~ 75 (191)
-+..++.|...++.+++... .+...+-++||+++| |++|++ |. +|... .-.+.|+..|.++
T Consensus 110 ~~k~~l~g~t~v~e~~ggfgn~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d~~~~~------~i~rGY~~gKR~A 182 (283)
T KOG4288|consen 110 PNKLKLSGPTFVYEMMGGFGNIILMDRINGTANINAVKAAAKAG-VPRFVYISAHDFGLPP------LIPRGYIEGKREA 182 (283)
T ss_pred cchhhhcCCcccHHHhcCccchHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhhcCCCC------ccchhhhccchHH
Confidence 34556678888888887643 244567788999999 999986 32 22211 1133688999999
Q ss_pred HHHHHh-cCCCeEEEecccccccccccccCCC-------------C---CCceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 76 RRAIEA-VEIPYTFVSANCYGAYFVNVLLRPF-------------E---PHDDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 76 e~~l~~-~~~~~tilrp~~~~~~~~~~~~~~~-------------~---~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
|..|.. .+..-.++|||++++.. .+..+. + ....-.++--|....+++.+++||.+++.++
T Consensus 183 E~Ell~~~~~rgiilRPGFiyg~R--~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai 260 (283)
T KOG4288|consen 183 EAELLKKFRFRGIILRPGFIYGTR--NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAI 260 (283)
T ss_pred HHHHHHhcCCCceeeccceeeccc--ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhc
Confidence 988875 57778999999999852 111100 0 1111112223455578999999999999999
Q ss_pred cCccc
Q 038413 139 NDPRT 143 (191)
Q Consensus 139 ~~~~~ 143 (191)
.+|.-
T Consensus 261 ~dp~f 265 (283)
T KOG4288|consen 261 EDPDF 265 (283)
T ss_pred cCCCc
Confidence 99864
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.49 E-value=1e-06 Score=65.74 Aligned_cols=144 Identities=11% Similarity=0.122 Sum_probs=85.4
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|++++.+++++ +|+|||+++... ..+..++++++ ++.+ +++++.
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ 139 (246)
T PRK05653 61 FDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNI 139 (246)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 488999988887764 499999997632 12234555555 5667 788774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .+...|..+|...+...+ ..++.++++|||.+.+........ ....... ......
T Consensus 140 ss~~~~~~~----~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~~----~~~~~~ 210 (246)
T PRK05653 140 SSVSGVTGN----PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPE-EVKAEIL----KEIPLG 210 (246)
T ss_pred CcHHhccCC----CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhH-HHHHHHH----hcCCCC
Confidence 443221111 223456667765554433 358899999999887754321110 0000000 011114
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCC
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTN 155 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~ 155 (191)
.+++.+|+|+++..++.... ..++.+.++| ++
T Consensus 211 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g-g~ 244 (246)
T PRK05653 211 RLGQPEEVANAVAFLASDAASYITGQVIPVNG-GM 244 (246)
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCCEEEeCC-Ce
Confidence 56888999999999987532 3478888874 44
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.3e-06 Score=61.77 Aligned_cols=134 Identities=16% Similarity=0.206 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCCc-------------------c----cHHHHHHHHHHcCCccEEEcCC-cc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQF-------------------L----DQLKIVHAIKVAGNIKRFLPSE-FG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~~-------------------~----~~~~li~aa~~~g~vkr~v~s~-~g 53 (191)
+|+.|.+++.++++ +.|+|||+++.... . ...++++++++.+ .+.++.|+ .+
T Consensus 54 ~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~ 132 (227)
T PRK08219 54 VDLTDPEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAG 132 (227)
T ss_pred cCCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHh
Confidence 68999999999886 58999999986320 1 1455666666665 33333343 32
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-----cC-CCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecch
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-----VE-IPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~-~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
.... .+...|..+|..++.+++. .+ +.++.++||.+.......... . . +....+..++++
T Consensus 133 ~~~~-----~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~---~-~-----~~~~~~~~~~~~ 198 (227)
T PRK08219 133 LRAN-----PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVA---Q-E-----GGEYDPERYLRP 198 (227)
T ss_pred cCcC-----CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhh---h-h-----ccccCCCCCCCH
Confidence 2111 1234567788877766543 24 889999998765432211110 0 0 001112457999
Q ss_pred hhHHHHHHHHhcCcccCCceeEe
Q 038413 128 EDIAKCTIKVINDPRTCNRIVIY 150 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~~~~~~~~i 150 (191)
+|+|++++.++++++ .+.++++
T Consensus 199 ~dva~~~~~~l~~~~-~~~~~~~ 220 (227)
T PRK08219 199 ETVAKAVRFAVDAPP-DAHITEV 220 (227)
T ss_pred HHHHHHHHHHHcCCC-CCccceE
Confidence 999999999998864 2344444
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.6e-06 Score=63.81 Aligned_cols=152 Identities=11% Similarity=0.180 Sum_probs=87.1
Q ss_pred CCCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.+ + .+.|+|+|+++... ..+..+++++ +++.+ ..++|.
T Consensus 61 ~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~v 138 (280)
T PRK06914 61 LDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINI 138 (280)
T ss_pred cCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58888887765 3 24699999987532 1223334444 57777 777764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-CC--CC-CceEEE----
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-PF--EP-HDDVVV---- 114 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-~~--~~-~~~~~~---- 114 (191)
|+.+..... .+...|..+|..++.+++. .|++++++|||++..+....... .. .. ......
T Consensus 139 sS~~~~~~~----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (280)
T PRK06914 139 SSISGRVGF----PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKK 214 (280)
T ss_pred CcccccCCC----CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHH
Confidence 432211111 2244577788887776553 48999999999988764321110 00 00 000000
Q ss_pred -ecC-CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHH
Q 038413 115 -YGN-GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQL 160 (191)
Q Consensus 115 -~~~-g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~ 160 (191)
... ......+++.+|+|++++.++.++... ..|++++ +..+++.
T Consensus 215 ~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~-~~~~~~~-~~~~~~~ 260 (280)
T PRK06914 215 IQKHINSGSDTFGNPIDVANLIVEIAESKRPK-LRYPIGK-GVKLMIL 260 (280)
T ss_pred HHHHHhhhhhccCCHHHHHHHHHHHHcCCCCC-cccccCC-chHHHHH
Confidence 000 011235689999999999999987543 5567753 4555444
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.5e-06 Score=62.89 Aligned_cols=144 Identities=12% Similarity=0.079 Sum_probs=83.9
Q ss_pred CCCCCHHHHHHhhc-------------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccE
Q 038413 1 GELDEHEKIVSILK-------------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr 46 (191)
+|+.|.+++.++++ ++|++||+++... +.+..++++++.+. . ..+
T Consensus 63 ~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~ 141 (254)
T PRK12746 63 ADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-EGR 141 (254)
T ss_pred cCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-CCE
Confidence 58999999888776 4899999998632 12345555666542 2 235
Q ss_pred EEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
++. |+...... ..+...|..+|..++.+.+ ..++.++.++||++.......... ...........
T Consensus 142 ~v~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~~~~~~~~ 214 (254)
T PRK12746 142 VINISSAEVRLG----FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD---DPEIRNFATNS 214 (254)
T ss_pred EEEECCHHhcCC----CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc---ChhHHHHHHhc
Confidence 553 44222111 1223457778888776643 257999999999876643221110 00000001111
Q ss_pred cceeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
.....+++++|+|+++..++.++.. .++.+++.+
T Consensus 215 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~ 250 (254)
T PRK12746 215 SVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSG 250 (254)
T ss_pred CCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence 1123467899999999888876532 367888873
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.3e-06 Score=63.88 Aligned_cols=147 Identities=11% Similarity=0.089 Sum_probs=84.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC-C-------------------cccHHHHHHHH----HHcCCc-cEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP-Q-------------------FLDQLKIVHAI----KVAGNI-KRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~-~-------------------~~~~~~li~aa----~~~g~v-kr~v 48 (191)
+|+.|++++.++++ ++|+|||+++.. . ..+..++++++ +..+ . ++++
T Consensus 65 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv 143 (264)
T PRK12829 65 ADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVII 143 (264)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEE
Confidence 58899998887764 689999999865 1 12334444444 5555 5 4555
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC--C-CCCceEEEec-
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP--F-EPHDDVVVYG- 116 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~--~-~~~~~~~~~~- 116 (191)
. |+....... .+...|..+|...+.+++. .++.++++|||++++......... . ..........
T Consensus 144 ~~ss~~~~~~~----~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (264)
T PRK12829 144 ALSSVAGRLGY----PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQE 219 (264)
T ss_pred EecccccccCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHH
Confidence 4 332211111 1233467788877777653 489999999999876543221110 0 0000000000
Q ss_pred --CCcceeeecchhhHHHHHHHHhcCc--ccCCceeEeec
Q 038413 117 --NGEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRP 152 (191)
Q Consensus 117 --~g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~ 152 (191)
.......+++++|+|+++..++... ...++.+.+.+
T Consensus 220 ~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~ 259 (264)
T PRK12829 220 YLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDG 259 (264)
T ss_pred HHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCC
Confidence 0001124799999999998888653 22367788875
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.9e-06 Score=61.99 Aligned_cols=101 Identities=8% Similarity=-0.030 Sum_probs=68.6
Q ss_pred HHHHHHHHHhcCCCeEEEecccccccccccccCC--CCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeE
Q 038413 72 KRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRP--FEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVI 149 (191)
Q Consensus 72 k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~ 149 (191)
+++............+++|.|...+-+......+ .++-+.---.|+|.+-++|||++|++..+.+++++|.. ..+++
T Consensus 160 ~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v-~GViN 238 (315)
T KOG3019|consen 160 EWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSV-KGVIN 238 (315)
T ss_pred HHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCC-Cceec
Confidence 4444333333457789999998776432221111 01111111246888999999999999999999999864 34454
Q ss_pred eecCCCccCHHHHHHHHHHHhCCce
Q 038413 150 YRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 150 i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
-.. ++..+..|+.+.+.++++++.
T Consensus 239 gvA-P~~~~n~Ef~q~lg~aL~Rp~ 262 (315)
T KOG3019|consen 239 GVA-PNPVRNGEFCQQLGSALSRPS 262 (315)
T ss_pred ccC-CCccchHHHHHHHHHHhCCCc
Confidence 332 689999999999999999984
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.7e-06 Score=63.56 Aligned_cols=153 Identities=9% Similarity=0.080 Sum_probs=90.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC----CccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG----NIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g----~vkr~v-~ 49 (191)
+|+.|.+++.++++ ..|+++|+++... ..+..++++++.... .-.++| .
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~ 138 (257)
T PRK07067 59 LDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINM 138 (257)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 58889888887775 4799999987531 234566777765431 012454 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC----C-CC-CCceEEEec
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR----P-FE-PHDDVVVYG 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~----~-~~-~~~~~~~~~ 116 (191)
|+....... .+...|..+|...+.+.+. .|+..+.++||+..+........ . .. ........+
T Consensus 139 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (257)
T PRK07067 139 ASQAGRRGE----ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVG 214 (257)
T ss_pred CCHHhCCCC----CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHh
Confidence 442211111 2344577788887766542 57899999999887653221100 0 00 000111122
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIIS 158 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t 158 (191)
.+.....+++.+|+|+++..++.++. ..++.+++.| ++.+|
T Consensus 215 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g-g~~~~ 257 (257)
T PRK07067 215 EAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDG-GNWMS 257 (257)
T ss_pred hcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecC-CEeCC
Confidence 23333568899999999999998753 2378888885 55543
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.5e-05 Score=60.87 Aligned_cols=136 Identities=10% Similarity=0.116 Sum_probs=81.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCCc-----------------------ccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQF-----------------------LDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~~-----------------------~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|+|||+++.... .....++..+++.+ ..++|.
T Consensus 53 ~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~i 131 (273)
T PRK06182 53 LDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINI 131 (273)
T ss_pred eeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999999888775 68999999985420 11466677788887 778764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCC-ceEEE-------
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPH-DDVVV------- 114 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~-~~~~~------- 114 (191)
|+.+..... .....|..+|..++.+.+ ..|+++++++||++..++........... .....
T Consensus 132 sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (273)
T PRK06182 132 SSMGGKIYT----PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAV 207 (273)
T ss_pred cchhhcCCC----CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHH
Confidence 443221111 112346678888876543 35899999999998775432111000000 00000
Q ss_pred ---ecCCcceeeecchhhHHHHHHHHhcCc
Q 038413 115 ---YGNGEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 115 ---~~~g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
.........+.+.+|+|++++.++...
T Consensus 208 ~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~ 237 (273)
T PRK06182 208 AASMRSTYGSGRLSDPSVIADAISKAVTAR 237 (273)
T ss_pred HHHHHHhhccccCCCHHHHHHHHHHHHhCC
Confidence 000111234568999999999998864
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.8e-05 Score=58.82 Aligned_cols=159 Identities=18% Similarity=0.090 Sum_probs=90.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|+|||+++... +.+..++++++ .+.+.-.++|.
T Consensus 62 ~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~i 141 (275)
T PRK05876 62 CDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFT 141 (275)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 48899998887765 3699999998531 12334455554 34431245553
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCC----CCCceEEEecC
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPF----EPHDDVVVYGN 117 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~----~~~~~~~~~~~ 117 (191)
|| .+... ..+...|..+|..++.+.+ ..|+..++++||.+............ ........++.
T Consensus 142 sS~~~~~~-----~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (275)
T PRK05876 142 ASFAGLVP-----NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGP 216 (275)
T ss_pred CChhhccC-----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCcccccccccccccc
Confidence 43 22211 1223457778876443332 25899999999987765432211110 01111122333
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
.....++++++|+|+.++.++..+ +.+.+. ...+..++.+.+.+...
T Consensus 217 ~~~~~~~~~~~dva~~~~~ai~~~----~~~~~~---~~~~~~~~~~~~~~~~~ 263 (275)
T PRK05876 217 LPLQDDNLGVDDIAQLTADAILAN----RLYVLP---HAASRASIRRRFERIDR 263 (275)
T ss_pred ccccccCCCHHHHHHHHHHHHHcC----CeEEec---ChhhHHHHHHHHHHHHH
Confidence 334467899999999999998764 333443 33455666665555543
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=7.8e-06 Score=61.70 Aligned_cols=149 Identities=8% Similarity=0.149 Sum_probs=87.0
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.+++++ .|+|||+++... ..+..++++++. +.+ ..++|.
T Consensus 66 ~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i 144 (255)
T PRK07523 66 FDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINI 144 (255)
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEE
Confidence 488998888887753 799999998632 123344555554 445 667764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++.+......... ..............
T Consensus 145 ss~~~~~~----~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~---~~~~~~~~~~~~~~ 217 (255)
T PRK07523 145 ASVQSALA----RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD---PEFSAWLEKRTPAG 217 (255)
T ss_pred ccchhccC----CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC---HHHHHHHHhcCCCC
Confidence 44221111 12234577788887776542 589999999998876542221100 00000001111112
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccC
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
.+...+|+|+++..++.++. . .++.+.+.| +...|
T Consensus 218 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g-g~~~~ 254 (255)
T PRK07523 218 RWGKVEELVGACVFLASDASSFVNGHVLYVDG-GITAS 254 (255)
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCcEEEECC-Ceecc
Confidence 36679999999999887643 2 267778874 55443
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.5e-05 Score=59.89 Aligned_cols=146 Identities=8% Similarity=0.067 Sum_probs=84.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC-CccEEEc-CCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG-NIKRFLP-SEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g-~vkr~v~-s~~ 52 (191)
+|++|.+++.++++ +.|+|||+++... +.+..++++++.+.- ...++|. |+.
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (252)
T PRK06077 63 ADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV 142 (252)
T ss_pred eccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence 47888888777654 5799999998521 122344555555321 0235553 332
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCC-CCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRP-FEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~i 125 (191)
.... ...+...|..+|..++.+++. .++.+..++||++........... ....+. ..........++
T Consensus 143 ~~~~----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 216 (252)
T PRK06077 143 AGIR----PAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKE--FAEKFTLMGKIL 216 (252)
T ss_pred hccC----CCCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHH--HHHhcCcCCCCC
Confidence 2111 112345677889888777653 267788899998765432111110 000000 000111123679
Q ss_pred chhhHHHHHHHHhcCcccCCceeEeec
Q 038413 126 YEEDIAKCTIKVINDPRTCNRIVIYRP 152 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~~~~~~~~i~~ 152 (191)
+++|+|+++..++..+...++.+++.+
T Consensus 217 ~~~dva~~~~~~~~~~~~~g~~~~i~~ 243 (252)
T PRK06077 217 DPEEVAEFVAAILKIESITGQVFVLDS 243 (252)
T ss_pred CHHHHHHHHHHHhCccccCCCeEEecC
Confidence 999999999999987655578888885
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.5e-05 Score=59.50 Aligned_cols=142 Identities=13% Similarity=0.114 Sum_probs=81.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++. +.+ .++++.
T Consensus 62 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~i 140 (248)
T PRK05557 62 GDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINI 140 (248)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 48899988887765 5799999997532 122344555554 455 667664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|...+.+++ ..++.++.++||++.......... .... ..-......
T Consensus 141 ss~~~~~~~----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~-~~~~----~~~~~~~~~ 211 (248)
T PRK05557 141 SSVVGLMGN----PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPE-DVKE----AILAQIPLG 211 (248)
T ss_pred cccccCcCC----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccCh-HHHH----HHHhcCCCC
Confidence 432211111 123356677877765543 258899999999875532211100 0000 000011112
Q ss_pred eecchhhHHHHHHHHhcCc--ccCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDP--RTCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~ 152 (191)
.+.+.+|+|+++..++.+. ...++.+++++
T Consensus 212 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~ 243 (248)
T PRK05557 212 RLGQPEEIASAVAFLASDEAAYITGQTLHVNG 243 (248)
T ss_pred CCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence 3568999999998888763 23467888874
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.2e-05 Score=60.07 Aligned_cols=145 Identities=10% Similarity=0.144 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..+++++ +++.+ ..++|.
T Consensus 57 ~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~i 135 (277)
T PRK06180 57 LDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNI 135 (277)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEE
Confidence 48899998887776 4799999998632 1233455555 44555 667763
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC---CCCC-ce-EEEec-
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP---FEPH-DD-VVVYG- 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~---~~~~-~~-~~~~~- 116 (191)
|+.+..... .+...|..+|..++.+++. .|+++++++||.+..++....... .... .. .....
T Consensus 136 SS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (277)
T PRK06180 136 TSMGGLITM----PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQ 211 (277)
T ss_pred ecccccCCC----CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHH
Confidence 442211111 2244577888877766543 489999999999876432111000 0000 00 00000
Q ss_pred --CCcceeeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 117 --NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 117 --~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
.......+.+.+|+|++++.++.++... ..+.++
T Consensus 212 ~~~~~~~~~~~~~~dva~~~~~~l~~~~~~-~~~~~g 247 (277)
T PRK06180 212 AREAKSGKQPGDPAKAAQAILAAVESDEPP-LHLLLG 247 (277)
T ss_pred HHHhhccCCCCCHHHHHHHHHHHHcCCCCC-eeEecc
Confidence 0001124568999999999999876532 334444
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.1e-05 Score=61.47 Aligned_cols=133 Identities=12% Similarity=0.133 Sum_probs=78.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... . .....++..+++.+ ..+++.
T Consensus 56 ~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~v 134 (270)
T PRK05650 56 CDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNI 134 (270)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEE
Confidence 48888888777664 5899999998532 0 11234556677777 778764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|...+.+.+ ..|+.++.++||++..++....... .......-.+....
T Consensus 135 sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~ 207 (270)
T PRK05650 135 ASMAGLMQG----PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGP---NPAMKAQVGKLLEK 207 (270)
T ss_pred CChhhcCCC----CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccC---chhHHHHHHHHhhc
Confidence 432211111 123456678877555433 2589999999999877643321110 00000000011123
Q ss_pred eecchhhHHHHHHHHhcCc
Q 038413 123 VFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~ 141 (191)
.+++.+|+|+.++.++.+.
T Consensus 208 ~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 208 SPITAADIADYIYQQVAKG 226 (270)
T ss_pred CCCCHHHHHHHHHHHHhCC
Confidence 4689999999999999874
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.8e-05 Score=58.19 Aligned_cols=149 Identities=11% Similarity=0.091 Sum_probs=86.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC-------------------CcccHHHHHHHHHHcC--CccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP-------------------QFLDQLKIVHAIKVAG--NIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~-------------------~~~~~~~li~aa~~~g--~vkr~v~-s~ 51 (191)
+|++|.+++.++++ ++|+|||+++.. ++.+..++++++...- .-.+++. ++
T Consensus 64 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~ 143 (249)
T PRK09135 64 ADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD 143 (249)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC
Confidence 58999999888876 469999999842 1345677888875321 0123332 22
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
... .....+...|..+|..++.+++. .++.++.+||+++++............... . .+.....+.
T Consensus 144 ~~~----~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~ 215 (249)
T PRK09135 144 IHA----ERPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAI--L--ARTPLKRIG 215 (249)
T ss_pred hhh----cCCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHH--H--hcCCcCCCc
Confidence 111 11123456788899999888764 258899999998876532211000000000 0 000001123
Q ss_pred chhhHHHHHHHHhcCc-ccCCceeEeecCCCccC
Q 038413 126 YEEDIAKCTIKVINDP-RTCNRIVIYRPQTNIIS 158 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~-~~~~~~~~i~~~~~~~t 158 (191)
+++|+|+++..++.+. ...++.+++++ ++.++
T Consensus 216 ~~~d~a~~~~~~~~~~~~~~g~~~~i~~-g~~~~ 248 (249)
T PRK09135 216 TPEDIAEAVRFLLADASFITGQILAVDG-GRSLT 248 (249)
T ss_pred CHHHHHHHHHHHcCccccccCcEEEECC-Ceecc
Confidence 5899999996666543 33578899985 55443
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.8e-05 Score=57.77 Aligned_cols=144 Identities=11% Similarity=0.083 Sum_probs=84.6
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|+|||+++... ..+ ...++.++++.+ ..+++. |
T Consensus 48 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~s 126 (234)
T PRK07577 48 CDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNIC 126 (234)
T ss_pred eeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEc
Confidence 48889888877765 6899999998632 011 344566777777 778764 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+.+. ... .....|..+|..++.+.+. .|+.++.++||.+............ ....-.+. .......
T Consensus 127 S~~~-~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~-~~~~~~~~-~~~~~~~ 199 (234)
T PRK07577 127 SRAI-FGA----LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVG-SEEEKRVL-ASIPMRR 199 (234)
T ss_pred cccc-cCC----CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccc-hhHHHHHh-hcCCCCC
Confidence 4321 111 1234677888887766542 5899999999988765432211000 00000000 0000012
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
....+|+|+++..++.++. ..++.+.+.|
T Consensus 200 ~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g 230 (234)
T PRK07577 200 LGTPEEVAAAIAFLLSDDAGFITGQVLGVDG 230 (234)
T ss_pred CcCHHHHHHHHHHHhCcccCCccceEEEecC
Confidence 3468999999999998753 2367777764
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=3e-05 Score=58.03 Aligned_cols=139 Identities=8% Similarity=0.086 Sum_probs=83.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH-----HcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK-----VAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~-----~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++. +.+ .+++|.
T Consensus 66 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~ 144 (249)
T PRK12827 66 FDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVN 144 (249)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEE
Confidence 58889988887763 5899999998532 234566777776 455 667664
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+.+..... .+...|..+|...+.+++. .++.++.++||+..+........ . +.+ .. ..+
T Consensus 145 ~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~---~-~~~---~~-~~~ 212 (249)
T PRK12827 145 IASVAGVRGN----RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP---T-EHL---LN-PVP 212 (249)
T ss_pred ECCchhcCCC----CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch---H-HHH---Hh-hCC
Confidence 443221111 1234567788776655432 48999999999877643211100 0 000 00 011
Q ss_pred -eeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 122 -AVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 122 -~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
..+.+.+|+|+++..++.+... .++.+.+.+
T Consensus 213 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~ 246 (249)
T PRK12827 213 VQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDG 246 (249)
T ss_pred CcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence 1235789999999988876432 256777763
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.5e-05 Score=60.97 Aligned_cols=136 Identities=15% Similarity=0.148 Sum_probs=78.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++ ++.+ ..+||.
T Consensus 66 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~i 144 (274)
T PRK07775 66 LDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFV 144 (274)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 58899998887775 4699999998632 12234454544 3444 456663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCC--ceEEEecCCcc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPH--DDVVVYGNGEA 120 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~ 120 (191)
|+....... .+...|..+|...+.+++. .|+..+++|||++............... .....++ +..
T Consensus 145 sS~~~~~~~----~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~-~~~ 219 (274)
T PRK07775 145 GSDVALRQR----PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWG-QAR 219 (274)
T ss_pred CChHhcCCC----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhc-ccc
Confidence 432211111 1234577889888877653 3899999999987543211100000000 0001111 122
Q ss_pred eeeecchhhHHHHHHHHhcCcc
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
...+++++|+|+++..++..+.
T Consensus 220 ~~~~~~~~dva~a~~~~~~~~~ 241 (274)
T PRK07775 220 HDYFLRASDLARAITFVAETPR 241 (274)
T ss_pred cccccCHHHHHHHHHHHhcCCC
Confidence 3568999999999999998764
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=2e-05 Score=59.44 Aligned_cols=133 Identities=16% Similarity=0.187 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHhhc--------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK--------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~--------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ +.|.++|+++... +.+ ...+++++++.+ .++++.
T Consensus 52 ~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~ 130 (256)
T PRK08017 52 LDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVM 130 (256)
T ss_pred eecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEE
Confidence 47788777666543 3588999987531 011 134578888887 777763
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ ++.... .....|..+|...+.+.+ ..++++++++||.+...+....... . ........+..
T Consensus 131 ~ss~~~~~~~-----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--~-~~~~~~~~~~~ 202 (256)
T PRK08017 131 TSSVMGLIST-----PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQT--Q-SDKPVENPGIA 202 (256)
T ss_pred EcCcccccCC-----CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccch--h-hccchhhhHHH
Confidence 43 332111 123457788888876543 3589999999998765433221110 1 01111122333
Q ss_pred eeeecchhhHHHHHHHHhcCcc
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
++.+++.+|+++.+..++.++.
T Consensus 203 ~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 203 ARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred hhcCCCHHHHHHHHHHHHhCCC
Confidence 4567999999999999998865
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.2e-05 Score=58.88 Aligned_cols=141 Identities=13% Similarity=0.140 Sum_probs=84.8
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++. .|+|||+++... ..+..++++++. +.+ ..+++.
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ 141 (247)
T PRK12935 63 ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISI 141 (247)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 488999998888765 699999998632 123345555554 344 446553
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+... . .+...|..+|..++.+.+. .++..++++||.+........ +. ........+..+
T Consensus 142 sS~~~~~~-~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~--~~---~~~~~~~~~~~~ 211 (247)
T PRK12935 142 SSIIGQAG-G----FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV--PE---EVRQKIVAKIPK 211 (247)
T ss_pred cchhhcCC-C----CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc--cH---HHHHHHHHhCCC
Confidence 44 23211 1 2234677888877666432 489999999998765422111 00 000000012223
Q ss_pred eeecchhhHHHHHHHHhcCcc-cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i~~ 152 (191)
..+.+.+|+++.++.++.... ..++.+++.+
T Consensus 212 ~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~ 243 (247)
T PRK12935 212 KRFGQADEIAKGVVYLCRDGAYITGQQLNING 243 (247)
T ss_pred CCCcCHHHHHHHHHHHcCcccCccCCEEEeCC
Confidence 467899999999999887543 2468888874
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.20 E-value=2e-05 Score=59.08 Aligned_cols=147 Identities=9% Similarity=0.131 Sum_probs=83.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHH----HHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKI----VHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~l----i~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++ ++++++.+ ..+++.
T Consensus 59 ~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~i 137 (250)
T TIGR03206 59 CDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNI 137 (250)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 58889888887765 4799999997431 1223333 44445666 677664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceE-EEecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDV-VVYGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~ 121 (191)
|+.+..... .....|..+|.+.+.+.+. .++++++++||.+.+...............+ ...-.....
T Consensus 138 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (250)
T TIGR03206 138 ASDAARVGS----SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL 213 (250)
T ss_pred CchhhccCC----CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc
Confidence 432221111 1133566788766655542 4899999999988775433221100000000 000000011
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+...+|+|+++..++.++. ..++.+.+.+
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 246 (250)
T TIGR03206 214 GRLGQPDDLPGAILFFSSDDASFITGQVLSVSG 246 (250)
T ss_pred cCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence 234678999999999887653 2367788874
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.8e-05 Score=58.46 Aligned_cols=133 Identities=17% Similarity=0.243 Sum_probs=79.6
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++++ .|+|||+++... ..+. ..++..+++.+ .+++|.
T Consensus 52 ~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~i 130 (270)
T PRK06179 52 LDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINI 130 (270)
T ss_pred eecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 589999999988864 699999998632 1122 33444467778 888774
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecC----
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN---- 117 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~---- 117 (191)
|+ .+... . .....|..+|..++.+++ ..|+++++++||++.+++....... ...+..+..
T Consensus 131 sS~~~~~~-~----~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~---~~~~~~~~~~~~~ 202 (270)
T PRK06179 131 SSVLGFLP-A----PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEP---DSPLAEYDRERAV 202 (270)
T ss_pred CCccccCC-C----CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCC---CCcchhhHHHHHH
Confidence 43 22211 0 113357788888876654 3589999999998877543322110 000000000
Q ss_pred -----CcceeeecchhhHHHHHHHHhcCcc
Q 038413 118 -----GEAKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 118 -----g~~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
..........+|+|+.++.++..+.
T Consensus 203 ~~~~~~~~~~~~~~~~~va~~~~~~~~~~~ 232 (270)
T PRK06179 203 VSKAVAKAVKKADAPEVVADTVVKAALGPW 232 (270)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHcCCC
Confidence 0001123567899999999988753
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00011 Score=54.78 Aligned_cols=136 Identities=17% Similarity=0.163 Sum_probs=81.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH---cCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV---AGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~---~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++.+ .+ ..++|. |
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~s 139 (237)
T PRK07326 61 ADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-GGYIINIS 139 (237)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-CeEEEEEC
Confidence 58888888877765 6899999987532 1122345555442 34 456663 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+...... ..+...|..+|..++.+.+ ..|++++.++||++.+++.... .. .....
T Consensus 140 s~~~~~~----~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-----~~---------~~~~~ 201 (237)
T PRK07326 140 SLAGTNF----FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-----PS---------EKDAW 201 (237)
T ss_pred ChhhccC----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-----cc---------hhhhc
Confidence 3221111 1123356677776655443 2589999999998876532211 00 00112
Q ss_pred ecchhhHHHHHHHHhcCcc-cCCceeEeecCCCc
Q 038413 124 FNYEEDIAKCTIKVINDPR-TCNRIVIYRPQTNI 156 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~-~~~~~~~i~~~~~~ 156 (191)
.+..+|+|+++..++..+. .....+.+.+ +++
T Consensus 202 ~~~~~d~a~~~~~~l~~~~~~~~~~~~~~~-~~~ 234 (237)
T PRK07326 202 KIQPEDIAQLVLDLLKMPPRTLPSKIEVRP-SRP 234 (237)
T ss_pred cCCHHHHHHHHHHHHhCCccccccceEEec-CCC
Confidence 3789999999999998764 5566677663 443
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00011 Score=56.42 Aligned_cols=123 Identities=7% Similarity=0.066 Sum_probs=66.8
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHH----HHHHcCCc------
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGNI------ 44 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~v------ 44 (191)
+|+.|.+++.+++++ .|+|||+++... ..+..++++ .+++.+ .
T Consensus 62 ~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~~~~~ 140 (287)
T PRK06194 62 TDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAA-EKDPAYE 140 (287)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCCCCCC
Confidence 589999999888763 699999998642 112333333 355554 3
Q ss_pred cEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEE
Q 038413 45 KRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV 114 (191)
Q Consensus 45 kr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~ 114 (191)
.++|. |+.+..... .+...|..+|...+.+++. .++..+.+.||++....... ...+...+
T Consensus 141 g~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~-----~~~~~~~~ 211 (287)
T PRK06194 141 GHIVNTASMAGLLAP----PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS-----ERNRPADL 211 (287)
T ss_pred eEEEEeCChhhccCC----CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc-----cccCchhc
Confidence 35553 332211111 1234577889888877653 13455667777654432111 11223444
Q ss_pred ecCCcceeeecchhhHHHH
Q 038413 115 YGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~ 133 (191)
.+++...+++++++|....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~ 230 (287)
T PRK06194 212 ANTAPPTRSQLIAQAMSQK 230 (287)
T ss_pred ccCccccchhhHHHHHHHh
Confidence 5555555566555554443
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=4.8e-05 Score=56.77 Aligned_cols=124 Identities=13% Similarity=0.125 Sum_probs=75.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++ ++.+ .+++|.
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ 141 (239)
T PRK07666 63 ADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINI 141 (239)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEE
Confidence 58889998888875 6899999987532 11223344444 3555 667663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|..++.+++ ..|++++.++||.+.+....... .. ...+.
T Consensus 142 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~----------~~--~~~~~ 205 (239)
T PRK07666 142 SSTAGQKGA----AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG----------LT--DGNPD 205 (239)
T ss_pred cchhhccCC----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc----------cc--ccCCC
Confidence 332211111 123346677776665543 35899999999988765321110 00 01123
Q ss_pred eecchhhHHHHHHHHhcCc
Q 038413 123 VFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~ 141 (191)
.++..+|+|+++..++.++
T Consensus 206 ~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 206 KVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred CCCCHHHHHHHHHHHHhCC
Confidence 4678999999999999875
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.1e-05 Score=58.83 Aligned_cols=145 Identities=12% Similarity=0.069 Sum_probs=85.3
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~-s~~g 53 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++.+ .+...+++. |+..
T Consensus 60 ~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~ 139 (245)
T PRK07060 60 LDVGDDAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQA 139 (245)
T ss_pred ecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHH
Confidence 48889888888876 4799999998632 1234555665543 220246663 4322
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
..... .+...|..+|..++.+++. .++..+.++||.+.++........ ......+. .......+++
T Consensus 140 ~~~~~----~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~ 212 (245)
T PRK07060 140 ALVGL----PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD--PQKSGPML-AAIPLGRFAE 212 (245)
T ss_pred HcCCC----CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC--HHHHHHHH-hcCCCCCCCC
Confidence 11111 1234677888888876543 478899999998877542211000 00000000 0111235789
Q ss_pred hhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 127 EEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+|+|+++..++.++. . .++.+.+.+
T Consensus 213 ~~d~a~~~~~l~~~~~~~~~G~~~~~~~ 240 (245)
T PRK07060 213 VDDVAAPILFLLSDAASMVSGVSLPVDG 240 (245)
T ss_pred HHHHHHHHHHHcCcccCCccCcEEeECC
Confidence 9999999999998764 2 367777764
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.2e-05 Score=63.00 Aligned_cols=92 Identities=12% Similarity=0.104 Sum_probs=64.2
Q ss_pred CHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CCcc-------cCCCC--C---
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SEFG-------CEEDR--V--- 59 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~~g-------~~~~~--~--- 59 (191)
+...+......+|.|||+++..+ +.++..+++.|.... .|.|.+ |+.+ .+... .
T Consensus 77 ~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~ 155 (382)
T COG3320 77 SERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEIS 155 (382)
T ss_pred CHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCcccccccc
Confidence 34456666678999999998754 577899999888777 786542 3211 11111 0
Q ss_pred ----CCCCCchhhHHHHHHHHHHHHh---cCCCeEEEeccccccc
Q 038413 60 ----RPLPPFEAYLEKKRIVRRAIEA---VEIPYTFVSANCYGAY 97 (191)
Q Consensus 60 ----~~~~~~~~~~~~k~~~e~~l~~---~~~~~tilrp~~~~~~ 97 (191)
....+..+|..+|+.+|..+++ .|++++|+|||+..+.
T Consensus 156 ~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gd 200 (382)
T COG3320 156 PTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGD 200 (382)
T ss_pred ccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeecc
Confidence 1112356789999999999986 5899999999988764
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.5e-05 Score=60.09 Aligned_cols=142 Identities=13% Similarity=0.110 Sum_probs=84.0
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC--------------------------cccHHHHHHHHHHcCCccEE
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ--------------------------FLDQLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~--------------------------~~~~~~li~aa~~~g~vkr~ 47 (191)
+|+.|++++.++++. .|+|||+++... ....+.++.++++.+ .+++
T Consensus 62 ~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~i 140 (256)
T PRK09186 62 LDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNL 140 (256)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceE
Confidence 589999998887763 799999985321 122355677777777 7787
Q ss_pred Ec-CC-cccCCC-----CCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEE
Q 038413 48 LP-SE-FGCEED-----RVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV 113 (191)
Q Consensus 48 v~-s~-~g~~~~-----~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~ 113 (191)
|. |+ .+.... ......+...|..+|...+.+.+ ..++.+++++||.+.+.....+... ...
T Consensus 141 v~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~-~~~---- 215 (256)
T PRK09186 141 VNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNA-YKK---- 215 (256)
T ss_pred EEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHH-HHh----
Confidence 74 33 332111 00001112357778887776654 2478899999997654321111000 000
Q ss_pred EecCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 114 VYGNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 114 ~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
......+++.+|+|+++..++.++. . .++.+.+.+
T Consensus 216 ----~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 252 (256)
T PRK09186 216 ----CCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDD 252 (256)
T ss_pred ----cCCccCCCCHHHhhhhHhheeccccccccCceEEecC
Confidence 0001246889999999999997643 2 256666653
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.1e-05 Score=59.01 Aligned_cols=143 Identities=12% Similarity=0.166 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++. +.+ ..+++.
T Consensus 63 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i 141 (250)
T PRK12939 63 ADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNL 141 (250)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEE
Confidence 58899988887763 5899999998632 122344555544 333 347664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|...+.+++. .++.++.++||++..+....... .........+....
T Consensus 142 sS~~~~~~~----~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~ 213 (250)
T PRK12939 142 ASDTALWGA----PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA----DERHAYYLKGRALE 213 (250)
T ss_pred CchhhccCC----CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC----hHHHHHHHhcCCCC
Confidence 432211111 1123466788887776653 47888999999876543221100 00000011112224
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+++.+|+|+++..++.++. ..|+.+.+.|
T Consensus 214 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g 245 (250)
T PRK12939 214 RLQVPDDVAGAVLFLLSDAARFVTGQLLPVNG 245 (250)
T ss_pred CCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 56889999999999998653 3478888874
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.12 E-value=7.3e-05 Score=56.18 Aligned_cols=147 Identities=9% Similarity=0.087 Sum_probs=84.2
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++++ .|+|||+++... ..+..++++++ ++.+ ..+++.
T Consensus 55 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ 133 (252)
T PRK08220 55 LDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTV 133 (252)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEE
Confidence 488898888887753 799999988632 12233455554 3444 456663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCC-CCce----EEEecC
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFE-PHDD----VVVYGN 117 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~-~~~~----~~~~~~ 117 (191)
|+.+.... ..+...|..+|...+.+++. .++..+.++||++.+........... .... ......
T Consensus 134 ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (252)
T PRK08220 134 GSNAAHVP----RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKL 209 (252)
T ss_pred CCchhccC----CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhh
Confidence 44322111 12244577788888776542 57889999999887754322111000 0000 000011
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
+.....+++++|+|+++..++.+.. . -++.+.+.+
T Consensus 210 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~g 246 (252)
T PRK08220 210 GIPLGKIARPQEIANAVLFLASDLASHITLQDIVVDG 246 (252)
T ss_pred cCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECC
Confidence 1112357889999999999887642 2 356666663
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=7.3e-05 Score=55.86 Aligned_cols=142 Identities=10% Similarity=0.080 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++ ++.+ .++++.
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~ 140 (247)
T PRK05565 62 ADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNI 140 (247)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58899998887775 6899999998642 12223344444 4455 566664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|...+.+++ ..|+.++.++||++.......... ... ..+.......
T Consensus 141 sS~~~~~~~----~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~-~~~----~~~~~~~~~~ 211 (247)
T PRK05565 141 SSIWGLIGA----SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE-EDK----EGLAEEIPLG 211 (247)
T ss_pred CCHhhccCC----CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh-HHH----HHHHhcCCCC
Confidence 442211111 112245567765554443 358999999999876543222110 000 0000001113
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|++++++.++.... -.++.+.+.+
T Consensus 212 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~ 243 (247)
T PRK05565 212 RLGKPEEIAKVVLFLASDDASYITGQIITVDG 243 (247)
T ss_pred CCCCHHHHHHHHHHHcCCccCCccCcEEEecC
Confidence 45688999999999998753 2367777763
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.07 E-value=4.9e-05 Score=65.47 Aligned_cols=150 Identities=13% Similarity=0.123 Sum_probs=87.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCc-cEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNI-KRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~v-kr~v~ 49 (191)
+|++|.+++.++++ +.|+|||+++... ..+..+++++ +++.+ . .++|.
T Consensus 477 ~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~ 555 (681)
T PRK08324 477 CDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVF 555 (681)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEE
Confidence 48889888877764 6899999998532 1224455444 44544 4 45553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccc-cccc-cc-ccC-----CCCCCc-eE
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYG-AYFV-NV-LLR-----PFEPHD-DV 112 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~-~~~~-~~-~~~-----~~~~~~-~~ 112 (191)
|+....... .....|..+|...+.+++. .|+.++.++|+.++ +..+ .. +.. ...... ..
T Consensus 556 vsS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~ 631 (681)
T PRK08324 556 IASKNAVNPG----PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELE 631 (681)
T ss_pred ECCccccCCC----CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHH
Confidence 442211111 1234677889888877653 36889999999885 3211 11 100 000000 00
Q ss_pred EEecCCcceeeecchhhHHHHHHHHhcC--cccCCceeEeecCCCc
Q 038413 113 VVYGNGEAKAVFNYEEDIAKCTIKVIND--PRTCNRIVIYRPQTNI 156 (191)
Q Consensus 113 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~--~~~~~~~~~i~~~~~~ 156 (191)
..+..+.....+++.+|+|+++..++.. ....++.+++.| +..
T Consensus 632 ~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg-G~~ 676 (681)
T PRK08324 632 EFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG-GNA 676 (681)
T ss_pred HHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC-Cch
Confidence 1233344456789999999999998853 334478888885 543
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=9e-05 Score=55.73 Aligned_cols=134 Identities=12% Similarity=0.070 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------ccc----HHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLD----QLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~----~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ++|+|||+++... ..+ ..+++.++++.+ ..+++.
T Consensus 53 ~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~ 131 (248)
T PRK10538 53 LDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIIN 131 (248)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 58889888877664 6899999987521 011 355667777777 778774
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+.+.... ..+...|..+|...+.+.+. .++..+.++||.+.+..................+ . .
T Consensus 132 isS~~~~~~----~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~-~---~ 203 (248)
T PRK10538 132 IGSTAGSWP----YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY-Q---N 203 (248)
T ss_pred ECCcccCCC----CCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhc-c---c
Confidence 44322111 12234577788877766543 4688899999987643211100000000000001 1 1
Q ss_pred eeecchhhHHHHHHHHhcCccc
Q 038413 122 AVFNYEEDIAKCTIKVINDPRT 143 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~ 143 (191)
..++..+|+|+++..++..++.
T Consensus 204 ~~~~~~~dvA~~~~~l~~~~~~ 225 (248)
T PRK10538 204 TVALTPEDVSEAVWWVATLPAH 225 (248)
T ss_pred cCCCCHHHHHHHHHHHhcCCCc
Confidence 2457899999999999987754
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.9e-05 Score=58.25 Aligned_cols=144 Identities=13% Similarity=0.072 Sum_probs=84.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC----------------------cccHHHHHHHHHH----cCCccEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ----------------------FLDQLKIVHAIKV----AGNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~----------------------~~~~~~li~aa~~----~g~vkr~ 47 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++.. .+ .+++
T Consensus 62 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~i 140 (250)
T PRK07774 62 VDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAI 140 (250)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEE
Confidence 48888888877664 5799999998521 2234555665553 34 4566
Q ss_pred Ec-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 LP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
+. |+.+.. .+...|..+|..++.+++. .++..+.++||.+......... +. ........+.
T Consensus 141 v~~sS~~~~-------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~---~~~~~~~~~~ 209 (250)
T PRK07774 141 VNQSSTAAW-------LYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT-PK---EFVADMVKGI 209 (250)
T ss_pred EEEeccccc-------CCccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC-CH---HHHHHHHhcC
Confidence 63 432211 1234677889888877654 3688899999987654322110 00 0000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
....+.+.+|+|+.+..++.++. ..++.+++.+ ++.+
T Consensus 210 ~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~-g~~~ 248 (250)
T PRK07774 210 PLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDG-GQII 248 (250)
T ss_pred CCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECC-Ceec
Confidence 01124578999999999888642 3478888885 5544
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00016 Score=54.74 Aligned_cols=132 Identities=12% Similarity=0.166 Sum_probs=78.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHH---cCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKV---AGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~---~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++.. .+ ..++| .
T Consensus 57 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~ 135 (263)
T PRK06181 57 TDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVV 135 (263)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 58899998888775 5799999987532 1223455565532 23 34555 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+++. .++.++.++||++........... ..... ...+....
T Consensus 136 sS~~~~~~----~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~--~~~~~--~~~~~~~~ 207 (263)
T PRK06181 136 SSLAGLTG----VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG--DGKPL--GKSPMQES 207 (263)
T ss_pred ecccccCC----CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc--ccccc--cccccccc
Confidence 33221111 12234677888887776542 589999999998776432221110 11111 11111223
Q ss_pred eecchhhHHHHHHHHhcCc
Q 038413 123 VFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~ 141 (191)
.+++++|+|+++..++...
T Consensus 208 ~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 208 KIMSAEECAEAILPAIARR 226 (263)
T ss_pred CCCCHHHHHHHHHHHhhCC
Confidence 6899999999999999863
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00015 Score=54.16 Aligned_cols=126 Identities=13% Similarity=0.170 Sum_probs=76.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|+|||+++... ..+ ...++..+++.+ ..+++.
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~i 140 (241)
T PRK07454 62 IDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINV 140 (241)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58899988877765 4799999998531 112 233445556666 567664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|..++.+.+ ..|+++++++||++....... .... ......
T Consensus 141 sS~~~~~~~----~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~--------~~~~---~~~~~~ 205 (241)
T PRK07454 141 SSIAARNAF----PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT--------ETVQ---ADFDRS 205 (241)
T ss_pred ccHHhCcCC----CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc--------cccc---cccccc
Confidence 332211111 123457778887776543 258999999999876532110 0000 000112
Q ss_pred eecchhhHHHHHHHHhcCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~ 142 (191)
.++..+|+|+++..++.++.
T Consensus 206 ~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 206 AMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred cCCCHHHHHHHHHHHHcCCc
Confidence 45789999999999999874
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=9.2e-05 Score=55.46 Aligned_cols=142 Identities=11% Similarity=0.155 Sum_probs=83.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+ ...++.++++.+ ..+++.
T Consensus 60 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~i 138 (246)
T PRK12938 60 GNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINI 138 (246)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEE
Confidence 58889888877664 5799999998632 111 344666677777 778764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|...+.+.+ ..++.++.++||++......... . .............
T Consensus 139 sS~~~~~~~----~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~-~----~~~~~~~~~~~~~ 209 (246)
T PRK12938 139 SSVNGQKGQ----FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-P----DVLEKIVATIPVR 209 (246)
T ss_pred echhccCCC----CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC-h----HHHHHHHhcCCcc
Confidence 432211111 123456678877665543 25789999999987765322110 0 0000000111123
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|++.++..++.++. ..++.+.+.+
T Consensus 210 ~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~ 241 (246)
T PRK12938 210 RLGSPDEIGSIVAWLASEESGFSTGADFSLNG 241 (246)
T ss_pred CCcCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence 35678999999998887642 3366677763
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.00 E-value=6.3e-05 Score=56.45 Aligned_cols=146 Identities=10% Similarity=0.183 Sum_probs=82.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... . ....+++.++++.+ .++++.
T Consensus 58 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ 136 (251)
T PRK07069 58 QDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNI 136 (251)
T ss_pred eecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEe
Confidence 47888888877664 5799999998542 0 13567788888877 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------c--CCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------V--EIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~--~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+....... .....|..+|...+.+.+. . ++..+.++||++.......................+..
T Consensus 137 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 212 (251)
T PRK07069 137 SSVAAFKAE----PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP 212 (251)
T ss_pred cChhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC
Confidence 432211111 1123566788877766542 2 36778899998776543221110000000000001111
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
...+.+.+|+|++++.++.++. ..++.+.+.
T Consensus 213 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~ 245 (251)
T PRK07069 213 LGRLGEPDDVAHAVLYLASDESRFVTGAELVID 245 (251)
T ss_pred CCCCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence 1235679999999998877643 235556665
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00011 Score=57.05 Aligned_cols=149 Identities=9% Similarity=0.067 Sum_probs=85.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHcC-CccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAG-NIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g-~vkr~v~-s~ 51 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++...- .-.++|. |+
T Consensus 113 ~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS 192 (300)
T PRK06128 113 GDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS 192 (300)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence 58889888777664 5799999998531 223456677775421 0125553 43
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeee
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
....... .....|..+|..++.+.+. .|+....++||++.......... .......++.......+
T Consensus 193 ~~~~~~~----~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~---~~~~~~~~~~~~p~~r~ 265 (300)
T PRK06128 193 IQSYQPS----PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ---PPEKIPDFGSETPMKRP 265 (300)
T ss_pred ccccCCC----CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC---CHHHHHHHhcCCCCCCC
Confidence 2211111 1233577888888776543 48999999999887654221100 00000011111111235
Q ss_pred cchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 125 NYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
...+|+|.++..++.+.. . -++.+.+.| +..+
T Consensus 266 ~~p~dva~~~~~l~s~~~~~~~G~~~~v~g-g~~~ 299 (300)
T PRK06128 266 GQPVEMAPLYVLLASQESSYVTGEVFGVTG-GLLL 299 (300)
T ss_pred cCHHHHHHHHHHHhCccccCccCcEEeeCC-CEeC
Confidence 678999999998887643 2 367888875 5543
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=9.2e-05 Score=55.30 Aligned_cols=142 Identities=11% Similarity=0.102 Sum_probs=81.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... ..+ ...+++++++.+ ..++|.
T Consensus 59 ~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~i 137 (245)
T PRK12824 59 LDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINI 137 (245)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEE
Confidence 48889888887765 3799999998532 112 233466667776 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|..++.+++ ..++..+.++||++......... ..............
T Consensus 138 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-----~~~~~~~~~~~~~~ 208 (245)
T PRK12824 138 SSVNGLKGQ----FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG-----PEVLQSIVNQIPMK 208 (245)
T ss_pred CChhhccCC----CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC-----HHHHHHHHhcCCCC
Confidence 443222111 112346678876665544 24788999999988764221110 00000000111112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|+++++..++..+. -.++.+.+.+
T Consensus 209 ~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~ 240 (245)
T PRK12824 209 RLGTPEEIAAAVAFLVSEAAGFITGETISING 240 (245)
T ss_pred CCCCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence 35578999999988886532 2367788874
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00011 Score=54.45 Aligned_cols=149 Identities=12% Similarity=0.054 Sum_probs=85.2
Q ss_pred CCCCCHHHHHHhhcc---CcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEEc-CCcccCCC
Q 038413 1 GELDEHEKIVSILKE---VDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEED 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g---~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~ 57 (191)
+|+.|.+++.++++. +|++||+++... ..+..+++++....+ ..++|. |+.+....
T Consensus 52 ~Dl~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~ 130 (230)
T PRK07041 52 LDITDEAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRP 130 (230)
T ss_pred ccCCCHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCC
Confidence 589999999988863 699999987532 122345566555555 567764 43322111
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHH
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAK 132 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 132 (191)
. .+...|..+|..++.+.+. .++..+.++||++......... ...................+...+|+|+
T Consensus 131 ~----~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~ 205 (230)
T PRK07041 131 S----ASGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLA-GDAREAMFAAAAERLPARRVGQPEDVAN 205 (230)
T ss_pred C----CcchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhh-ccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 1 2344677899988887764 2466778888876554321110 0000000000000000012346899999
Q ss_pred HHHHHhcCcccCCceeEeecCCCc
Q 038413 133 CTIKVINDPRTCNRIVIYRPQTNI 156 (191)
Q Consensus 133 ~~~~~l~~~~~~~~~~~i~~~~~~ 156 (191)
++..++.++...++.+.+.| +..
T Consensus 206 ~~~~l~~~~~~~G~~~~v~g-g~~ 228 (230)
T PRK07041 206 AILFLAANGFTTGSTVLVDG-GHA 228 (230)
T ss_pred HHHHHhcCCCcCCcEEEeCC-Cee
Confidence 99999987544478888874 443
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00011 Score=54.62 Aligned_cols=141 Identities=11% Similarity=0.160 Sum_probs=79.9
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~- 49 (191)
+|+.|.+++.+++.+ .|+|||+++... ..+..++++++.+ .+ .++++.
T Consensus 55 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~ 133 (239)
T TIGR01830 55 CDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINI 133 (239)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 488899988887754 599999998642 1234556666654 45 567764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .+...|..+|...+.+++ ..|+.++.++||.+........ ...... . +.. .....
T Consensus 134 sS~~~~~g~----~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~-~~~~~~-~--~~~-~~~~~ 204 (239)
T TIGR01830 134 SSVVGLMGN----AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKL-SEKVKK-K--ILS-QIPLG 204 (239)
T ss_pred CCccccCCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhc-ChHHHH-H--HHh-cCCcC
Confidence 432211111 112346667766555433 2589999999997654321110 000000 0 000 00012
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
.+.+.+|+|+++..++.++. ..++.+++.
T Consensus 205 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~ 235 (239)
T TIGR01830 205 RFGTPEEVANAVAFLASDEASYITGQVIHVD 235 (239)
T ss_pred CCcCHHHHHHHHHHHhCcccCCcCCCEEEeC
Confidence 35679999999988886542 346777876
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=7.6e-05 Score=56.40 Aligned_cols=147 Identities=9% Similarity=0.027 Sum_probs=81.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHH----HHHHHHHHcCCcc-EEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQL----KIVHAIKVAGNIK-RFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~----~li~aa~~~g~vk-r~v~ 49 (191)
+|++|.+++.+++. ..|+|||+++... +.+.. .++..+++.+ .+ +++.
T Consensus 60 ~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~ 138 (259)
T PRK12384 60 ADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG-IQGRIIQ 138 (259)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC-CCcEEEE
Confidence 48888888877764 4699999997532 12223 3444444455 33 5553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEeccccccccc-ccccC-----CCC-CCceEEE
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFV-NVLLR-----PFE-PHDDVVV 114 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~-~~~~~-----~~~-~~~~~~~ 114 (191)
|+....... .....|..+|...+.+++ ..|+....++||.+++... ..... ... .......
T Consensus 139 ~ss~~~~~~~----~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (259)
T PRK12384 139 INSKSGKVGS----KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQY 214 (259)
T ss_pred ecCcccccCC----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHH
Confidence 332111110 113356778887655543 3589999999997654211 11100 000 0001111
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+.++.....+++.+|++.++..++.+.. ..++.+++.+
T Consensus 215 ~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~ 254 (259)
T PRK12384 215 YIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTG 254 (259)
T ss_pred HHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcC
Confidence 2223333567899999999998887643 2368888874
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00016 Score=54.68 Aligned_cols=146 Identities=12% Similarity=0.142 Sum_probs=82.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc-----CCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA-----GNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~-----g~vkr~v~ 49 (191)
+|+.|.+++.+++. +.|+|||+++... ..+..++++++.+. + ..++|.
T Consensus 68 ~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~ 146 (259)
T PRK08213 68 ADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIIN 146 (259)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEE
Confidence 58999988876653 4799999988531 23456677766543 5 667764
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+.+..........+...|..+|...+.+++. .++.++.++||++.......... .... .. . .....
T Consensus 147 ~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~~~~-~~--~-~~~~~ 221 (259)
T PRK08213 147 VASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLE-RLGE-DL--L-AHTPL 221 (259)
T ss_pred ECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhH-HHHH-HH--H-hcCCC
Confidence 43221111111011235677889888877653 47888999998876532211100 0000 00 0 01001
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|+|+++..++.... . .++.+.+.+
T Consensus 222 ~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~ 254 (259)
T PRK08213 222 GRLGDDEDLKGAALLLASDASKHITGQILAVDG 254 (259)
T ss_pred CCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence 123468999998888886542 3 367777763
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00039 Score=52.34 Aligned_cols=146 Identities=10% Similarity=0.055 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccHHHHHHHHHH----cCC-----
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQLKIVHAIKV----AGN----- 43 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~~~li~aa~~----~g~----- 43 (191)
+|++|.+++.++++ ..|+|||+++... +.+..++++++.+ ...
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK12745 59 ADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELP 138 (256)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCC
Confidence 58889888776654 5799999987521 2234555555543 210
Q ss_pred ccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEe
Q 038413 44 IKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY 115 (191)
Q Consensus 44 vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~ 115 (191)
+++++. |+....... .+...|..+|..++.+++. .|++.++++||.+.......... ... . ..
T Consensus 139 ~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~--~--~~ 209 (256)
T PRK12745 139 HRSIVFVSSVNAIMVS----PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA-KYD--A--LI 209 (256)
T ss_pred CcEEEEECChhhccCC----CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch-hHH--h--hh
Confidence 345553 432211111 1234577888888766542 57899999999877643221100 000 0 00
Q ss_pred cCCcc-eeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 116 GNGEA-KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 116 ~~g~~-~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
..+.. ...+.+..|+|+++..++.... ..++.+++.+ +..
T Consensus 210 ~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~g-g~~ 252 (256)
T PRK12745 210 AKGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDG-GLS 252 (256)
T ss_pred hhcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECC-Cee
Confidence 00111 1246689999999888886542 2367888874 443
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0002 Score=53.87 Aligned_cols=143 Identities=11% Similarity=0.114 Sum_probs=82.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.+++. +.|+|||+++... ..+..++++++. +.+ ..++|.
T Consensus 68 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ 146 (255)
T PRK06841 68 CDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNL 146 (255)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 48888888877664 5799999998632 223445555544 445 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... .....|..+|...+.+.+. .|+..+.++||++......... ..........+....
T Consensus 147 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~ 218 (255)
T PRK06841 147 ASQAGVVAL----ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAW----AGEKGERAKKLIPAG 218 (255)
T ss_pred cchhhccCC----CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccccc----chhHHHHHHhcCCCC
Confidence 442211111 1123567788877766543 4788899999987664322110 000000000111113
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+.+.+|+|+.++.++.++. . .++.+.+.|
T Consensus 219 ~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dg 250 (255)
T PRK06841 219 RFAYPEEIAAAALFLASDAAAMITGENLVIDG 250 (255)
T ss_pred CCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence 46789999999999998753 2 367777764
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00052 Score=54.13 Aligned_cols=135 Identities=11% Similarity=0.107 Sum_probs=81.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... +..+..++..+++.+ ..++|.
T Consensus 64 ~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~i 142 (334)
T PRK07109 64 ADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQV 142 (334)
T ss_pred ecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEe
Confidence 58899998887754 5899999998531 112355677777766 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+....... .....|..+|..++.+.+. .++.++.++||.+..+....... ... .....
T Consensus 143 sS~~~~~~~----~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~-~~~-------~~~~~ 210 (334)
T PRK07109 143 GSALAYRSI----PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS-RLP-------VEPQP 210 (334)
T ss_pred CChhhccCC----CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh-hcc-------ccccC
Confidence 432211111 1234577788877655432 36889999999876643222110 000 00011
Q ss_pred eeeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
...+.+.+|+|++++.++.++ ++.+.++
T Consensus 211 ~~~~~~pe~vA~~i~~~~~~~---~~~~~vg 238 (334)
T PRK07109 211 VPPIYQPEVVADAILYAAEHP---RRELWVG 238 (334)
T ss_pred CCCCCCHHHHHHHHHHHHhCC---CcEEEeC
Confidence 124568999999999999886 3455554
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0003 Score=53.06 Aligned_cols=144 Identities=10% Similarity=0.138 Sum_probs=81.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... ..+ ...+++++++.+ ..++|.
T Consensus 67 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ 145 (256)
T PRK06124 67 FDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAI 145 (256)
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58899888887765 3589999988532 111 233345555566 677764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|...+.+++. .++..+.++||.+................. ........
T Consensus 146 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~---~~~~~~~~ 218 (256)
T PRK06124 146 TSIAGQVAR----AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPW---LAQRTPLG 218 (256)
T ss_pred eechhccCC----CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHH---HHhcCCCC
Confidence 432211111 1123566778777666542 478899999998877532211100000000 00000112
Q ss_pred eecchhhHHHHHHHHhcCcccC--CceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRTC--NRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~--~~~~~i~~ 152 (191)
.+++.+|+++++..++.++..+ ++.+.+.+
T Consensus 219 ~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dg 250 (256)
T PRK06124 219 RWGRPEEIAGAAVFLASPAASYVNGHVLAVDG 250 (256)
T ss_pred CCCCHHHHHHHHHHHcCcccCCcCCCEEEECC
Confidence 3678999999999999875322 56666653
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00039 Score=51.96 Aligned_cols=143 Identities=9% Similarity=0.076 Sum_probs=80.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC-CccEEEc-CCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG-NIKRFLP-SEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g-~vkr~v~-s~~ 52 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++.+.- .-.+++. |+.
T Consensus 62 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 62 ADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 48899998888876 5899999998532 233455566665431 0235553 432
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
+..... .+...|..+|..++.+++. .++.++.++||++........... ..............+.
T Consensus 142 ~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~----~~~~~~~~~~~~~~~~ 213 (245)
T PRK12937 142 VIALPL----PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSA----EQIDQLAGLAPLERLG 213 (245)
T ss_pred cccCCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCH----HHHHHHHhcCCCCCCC
Confidence 221111 2234577888888877653 478888999997655321110000 0000000011112345
Q ss_pred chhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 126 YEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
+.+|+|+++..++.++. . .++.+.+.
T Consensus 214 ~~~d~a~~~~~l~~~~~~~~~g~~~~~~ 241 (245)
T PRK12937 214 TPEEIAAAVAFLAGPDGAWVNGQVLRVN 241 (245)
T ss_pred CHHHHHHHHHHHcCccccCccccEEEeC
Confidence 78999999988887653 2 25666665
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00032 Score=52.92 Aligned_cols=147 Identities=11% Similarity=0.067 Sum_probs=82.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+ .+.++..+++.+ ..++|.
T Consensus 58 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~i 136 (255)
T PRK06463 58 CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNI 136 (255)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 48899998887765 4799999997631 111 355566666555 556663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+.... ......|..+|..++.+.+. .|+..+.++||++...........................
T Consensus 137 sS~~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
T PRK06463 137 ASNAGIGTA----AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVL 212 (255)
T ss_pred cCHHhCCCC----CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCc
Confidence 33 222110 01223477789888776653 4788899999987553221110000000000000011111
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+...+|+|++++.++.++. . .++.+.+.|
T Consensus 213 ~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg 245 (255)
T PRK06463 213 KTTGKPEDIANIVLFLASDDARYITGQVIVADG 245 (255)
T ss_pred CCCcCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence 234678999999999987653 2 356677763
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0011 Score=50.06 Aligned_cols=145 Identities=16% Similarity=0.098 Sum_probs=81.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc----CCccEEEcC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA----GNIKRFLPS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~----g~vkr~v~s 50 (191)
+|+.|.+++.++++ +.|++||+++... ..+...+++++.+. | .-.++.|
T Consensus 68 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~iv~~~s 146 (257)
T PRK12744 68 ADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNG-KIVTLVT 146 (257)
T ss_pred cCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CEEEEec
Confidence 58899988887765 4799999998631 12234455655432 3 1122323
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCC-CCceEEEecCCcce
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGEAK 121 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 121 (191)
+ .+... .....|..+|..++.+.+. .++..+.++||++............. ..............
T Consensus 147 s~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (257)
T PRK12744 147 SLLGAFT------PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSK 220 (257)
T ss_pred chhcccC------CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhccccccccccccc
Confidence 3 22211 1133577889988887664 36889999999987653211111000 00000000011111
Q ss_pred eeecchhhHHHHHHHHhcCccc-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPRT-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~-~~~~~~i~~ 152 (191)
..+.+.+|+|+++..++..... .++.+.+.+
T Consensus 221 ~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~g 252 (257)
T PRK12744 221 TGLTDIEDIVPFIRFLVTDGWWITGQTILING 252 (257)
T ss_pred CCCCCHHHHHHHHHHhhcccceeecceEeecC
Confidence 2467899999999999885332 267777764
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00035 Score=52.65 Aligned_cols=147 Identities=11% Similarity=0.118 Sum_probs=80.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHcC--CccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAG--NIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g--~vkr~v~-s 50 (191)
+|++|.+++.++++ ..|+|||+++... ..+...+++++.+.- ...++|. |
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~s 140 (258)
T PRK07890 61 TDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMIN 140 (258)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 48888888876664 4799999997531 122345566665421 0236663 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC-C----CC-CceEEEecC
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP-F----EP-HDDVVVYGN 117 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~-~----~~-~~~~~~~~~ 117 (191)
+....... .+...|..+|..++.+++. .++..+.++||.+++.....+... . .. .........
T Consensus 141 S~~~~~~~----~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (258)
T PRK07890 141 SMVLRHSQ----PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAA 216 (258)
T ss_pred chhhccCC----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhh
Confidence 32221111 1234577788887766653 478999999999877543321110 0 00 000000001
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
......+.+.+|+|+++..++.+.. .-++.+.+.
T Consensus 217 ~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~ 252 (258)
T PRK07890 217 NSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVN 252 (258)
T ss_pred cCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeC
Confidence 1111246789999999988887532 235656565
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00086 Score=50.68 Aligned_cols=121 Identities=13% Similarity=0.133 Sum_probs=74.8
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-----c------------------ccHHHHHHHHHHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-----F------------------LDQLKIVHAIKVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-----~------------------~~~~~li~aa~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|+++++++... . ...+.+++++++.+ ..+++. |
T Consensus 67 ~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~is 145 (253)
T PRK07904 67 FDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMS 145 (253)
T ss_pred ecCCChHHHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEe
Confidence 47888777554443 6899999887532 0 11245778888887 778763 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHH-------HHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRA-------IEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~-------l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+....... .+...|..+|.....+ +...++++++++||++........ . . ...
T Consensus 146 S~~g~~~~----~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~-----~----------~-~~~ 205 (253)
T PRK07904 146 SVAGERVR----RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA-----K----------E-APL 205 (253)
T ss_pred chhhcCCC----CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC-----C----------C-CCC
Confidence 43211111 1223466777766533 334689999999998776432110 0 0 012
Q ss_pred ecchhhHHHHHHHHhcCcc
Q 038413 124 FNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~ 142 (191)
.++.+|+|+.++..+.+++
T Consensus 206 ~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 206 TVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred CCCHHHHHHHHHHHHHcCC
Confidence 4689999999999998753
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0014 Score=53.39 Aligned_cols=165 Identities=13% Similarity=0.099 Sum_probs=102.9
Q ss_pred HHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC-cccCC----CC-C-C-CC---
Q 038413 7 EKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE-FGCEE----DR-V-R-PL--- 62 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~-~g~~~----~~-~-~-~~--- 62 (191)
.++....+.+++|||+|+... ..+++++++-|++....+-|+. |. |.... .+ . . ..
T Consensus 98 ~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~ 177 (467)
T KOG1221|consen 98 SDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPETCN 177 (467)
T ss_pred HHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCccccCC
Confidence 344445679999999999753 4678999999998754566663 22 21100 00 0 0 00
Q ss_pred -----------------------CC--chhhHHHHHHHHHHHHh--cCCCeEEEecccccccc----cccccC---C---
Q 038413 63 -----------------------PP--FEAYLEKKRIVRRAIEA--VEIPYTFVSANCYGAYF----VNVLLR---P--- 105 (191)
Q Consensus 63 -----------------------~~--~~~~~~~k~~~e~~l~~--~~~~~tilrp~~~~~~~----~~~~~~---~--- 105 (191)
.. ...|.-.|.-+|+.+.+ .++|.+|+||+.....+ .++... +
T Consensus 178 ~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~ 257 (467)
T KOG1221|consen 178 PEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGV 257 (467)
T ss_pred HHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceE
Confidence 00 11234467777888775 57999999998766432 122111 1
Q ss_pred --CCCCceEE-EecCCcceeeecchhhHHHHHHHHhcC-----cccCCceeEeecC-CCccCHHHHHHHHHHHhC
Q 038413 106 --FEPHDDVV-VYGNGEAKAVFNYEEDIAKCTIKVIND-----PRTCNRIVIYRPQ-TNIISQLELISLWEQKTG 171 (191)
Q Consensus 106 --~~~~~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~-----~~~~~~~~~i~~~-~~~~t~~e~~~~~~~~~g 171 (191)
....|.+. +..+.+...++|-+|.++.+++.+.-. ++....+|+++++ ...+|+.++++...+..-
T Consensus 258 i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 258 IIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE 332 (467)
T ss_pred EEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence 11334444 455667778999999999998876622 1112457888852 367999999999988775
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00045 Score=52.84 Aligned_cols=153 Identities=11% Similarity=0.049 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccHHHHHHHHHH----cCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQLKIVHAIKV----AGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~~~li~aa~~----~g~vkr~v 48 (191)
+|+.|.+++.++++ ++|++||+++... ..+..++++++.+ .+ -.+++
T Consensus 73 ~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii 151 (280)
T PLN02253 73 CDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIV 151 (280)
T ss_pred eecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEE
Confidence 48899998888775 5899999997531 1223445555542 22 22443
Q ss_pred -cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCC-CCceE----EE
Q 038413 49 -PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFE-PHDDV----VV 114 (191)
Q Consensus 49 -~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~-~~~~~----~~ 114 (191)
.++ .+... . .....|..+|..++.+.+. .++....++||.+............. ....+ ..
T Consensus 152 ~isS~~~~~~-~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~ 226 (280)
T PLN02253 152 SLCSVASAIG-G----LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAF 226 (280)
T ss_pred EecChhhccc-C----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHH
Confidence 333 22111 1 1123577899988877653 37888999999876532211100000 00000 00
Q ss_pred ecCCc-ceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccCHH
Q 038413 115 YGNGE-AKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIISQL 160 (191)
Q Consensus 115 ~~~g~-~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t~~ 160 (191)
..... .....++.+|+|+++..++.++. . .++.+.+.| +...+..
T Consensus 227 ~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdg-G~~~~~~ 274 (280)
T PLN02253 227 AGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDG-GFTCTNH 274 (280)
T ss_pred hhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECC-chhhccc
Confidence 00110 01234789999999999887643 2 367788874 5444433
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00076 Score=50.95 Aligned_cols=144 Identities=10% Similarity=0.031 Sum_probs=81.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC----C--------------------cccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP----Q--------------------FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~----~--------------------~~~~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ +.|++||+++.. . ......++..+++.+ ..++|.
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~ 141 (260)
T PRK12823 63 ADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVN 141 (260)
T ss_pred EeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEE
Confidence 47888877776654 579999999742 1 011245667776776 667663
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccc---ccCCCCCCceEEE----
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNV---LLRPFEPHDDVVV---- 114 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~---~~~~~~~~~~~~~---- 114 (191)
|+.... . .+..+|..+|...+.+.+. .|+..+.++||+........ ..... ......+
T Consensus 142 ~sS~~~~-~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~ 214 (260)
T PRK12823 142 VSSIATR-G-----INRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQS-EQEKAWYQQIV 214 (260)
T ss_pred EcCcccc-C-----CCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhcccc-ccccccHHHHH
Confidence 442211 1 1233577889888876653 47899999999887642110 00000 0000000
Q ss_pred --ecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 115 --YGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 115 --~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.-.+....-+.+.+|+|+++..++.+.. ..++.+++.+
T Consensus 215 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g 256 (260)
T PRK12823 215 DQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGG 256 (260)
T ss_pred HHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecC
Confidence 0001101124578999999999887643 2367777764
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00039 Score=53.25 Aligned_cols=92 Identities=18% Similarity=0.278 Sum_probs=63.2
Q ss_pred CCCCCHHHHHHhhc--------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK--------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~--------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ..|+|||+++... +.+ ..++++++++.+ ..++|.
T Consensus 54 ~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~ 132 (277)
T PRK05993 54 LDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQ 132 (277)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEE
Confidence 58899888877664 3699999987532 111 467888888888 778774
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYF 98 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~ 98 (191)
|+ .+... ..+...|..+|..++.+.+ ..|+.+++++||++...+
T Consensus 133 isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~ 185 (277)
T PRK05993 133 CSSILGLVP-----MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF 185 (277)
T ss_pred ECChhhcCC-----CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence 43 33211 1224467789998887754 358999999999877643
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00077 Score=50.75 Aligned_cols=144 Identities=8% Similarity=0.119 Sum_probs=81.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHH----HHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++. ..|+|+|+++... ..+..++++ .+++.+ ..++|.
T Consensus 65 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~i 143 (254)
T PRK08085 65 FNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINI 143 (254)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 48888888877764 4799999998532 112223334 444455 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|...+.+.+. .|+..+.++||++........... + .............
T Consensus 144 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~--~-~~~~~~~~~~p~~ 216 (254)
T PRK08085 144 CSMQSELGR----DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED--E-AFTAWLCKRTPAA 216 (254)
T ss_pred ccchhccCC----CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC--H-HHHHHHHhcCCCC
Confidence 443211111 1234577888887777653 489999999998876533221100 0 0000000111112
Q ss_pred eecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
.+...+|||.++..++.+. .. -++.+.+.|
T Consensus 217 ~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg 248 (254)
T PRK08085 217 RWGDPQELIGAAVFLSSKASDFVNGHLLFVDG 248 (254)
T ss_pred CCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence 3567899999988888763 23 256666663
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00059 Score=50.83 Aligned_cols=142 Identities=10% Similarity=0.101 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ .+|+|||+++... ..+ ...++..+++.+ +.+++.
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~i 135 (242)
T TIGR01829 57 GDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINI 135 (242)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 48888888777654 4799999997531 111 233566667777 777663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|...+.+++ ..++..+.++||++.++....... . ....+-......
T Consensus 136 ss~~~~~~~----~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~-~----~~~~~~~~~~~~ 206 (242)
T TIGR01829 136 SSVNGQKGQ----FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRE-D----VLNSIVAQIPVG 206 (242)
T ss_pred cchhhcCCC----CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccch-H----HHHHHHhcCCCC
Confidence 432211111 112346667776655443 258899999999887653221100 0 000000000111
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|+++++..++.++. ..++.+.+.|
T Consensus 207 ~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~g 238 (242)
T TIGR01829 207 RLGRPEEIAAAVAFLASEEAGYITGATLSING 238 (242)
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCCEEEecC
Confidence 23457899999887776642 3367777764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00019 Score=54.17 Aligned_cols=147 Identities=9% Similarity=0.057 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------cccHHHHHHHHHH---cCCccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLDQLKIVHAIKV---AGNIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~~~~li~aa~~---~g~vkr~v~-s~ 51 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++.+++.+ .+ ..+++. |+
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss 140 (258)
T PRK08628 62 VDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISS 140 (258)
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECC
Confidence 58899998887775 4799999998431 1112334444332 23 346653 43
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-CCCCCceE-EEecCCccee
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-PFEPHDDV-VVYGNGEAKA 122 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-~~~~~~~~-~~~~~g~~~~ 122 (191)
....... .+...|..+|..++.+.+. .++..+.++||.+.+.....+.. ........ .+........
T Consensus 141 ~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (258)
T PRK08628 141 KTALTGQ----GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGH 216 (258)
T ss_pred HHhccCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccc
Confidence 2211111 1234577889888777653 47889999999988764322111 00000000 0000000012
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+++.+|+|++++.++..+. ..++.+.+.+
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g 248 (258)
T PRK08628 217 RMTTAEEIADTAVFLLSERSSHTTGQWLFVDG 248 (258)
T ss_pred cCCCHHHHHHHHHHHhChhhccccCceEEecC
Confidence 46789999999999998652 3367777763
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00056 Score=51.67 Aligned_cols=146 Identities=10% Similarity=0.064 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC---CccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG---NIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g---~vkr~v~-s 50 (191)
+|++|.+++.++++ +.|+|||+++... +.+..++++++.... .-.+++. +
T Consensus 66 ~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~ 145 (258)
T PRK09134 66 ADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMI 145 (258)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence 58899998888775 3699999998531 223455566555422 0234442 2
Q ss_pred CcccCCCCCCCCCC-chhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPP-FEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~-~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+..... ..| ...|..+|..++.+.+. .++..+.++||+........... .. ........ ..
T Consensus 146 s~~~~~-----~~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~--~~-~~~~~~~~----~~ 213 (258)
T PRK09134 146 DQRVWN-----LNPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPED--FA-RQHAATPL----GR 213 (258)
T ss_pred chhhcC-----CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHH--HH-HHHhcCCC----CC
Confidence 211100 122 24677899877766553 23778889998765432100000 00 00000000 12
Q ss_pred ecchhhHHHHHHHHhcCcccCCceeEeecCCCccCH
Q 038413 124 FNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQ 159 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~ 159 (191)
..+++|+|+++..+++.+...++.+.+.+ +..+++
T Consensus 214 ~~~~~d~a~~~~~~~~~~~~~g~~~~i~g-g~~~~~ 248 (258)
T PRK09134 214 GSTPEEIAAAVRYLLDAPSVTGQMIAVDG-GQHLAW 248 (258)
T ss_pred CcCHHHHHHHHHHHhcCCCcCCCEEEECC-Ceeccc
Confidence 36799999999999987655578888874 454443
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00087 Score=49.98 Aligned_cols=142 Identities=6% Similarity=0.107 Sum_probs=77.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++ ++.+ ..++|.
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ 137 (245)
T PRK12936 59 ANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINI 137 (245)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEE
Confidence 48888888877653 5899999998531 12233444544 3345 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+........ ....|..+|..++.+++ ..++..+.++||++........ ... ..... . ......
T Consensus 138 sS~~~~~~~~----~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~-~~~~~--~-~~~~~~ 208 (245)
T PRK12936 138 TSVVGVTGNP----GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL-NDK-QKEAI--M-GAIPMK 208 (245)
T ss_pred CCHHhCcCCC----CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc-ChH-HHHHH--h-cCCCCC
Confidence 4422111111 12245667765554433 2579999999997755322111 000 00000 0 000112
Q ss_pred eecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
.+...+|+++++..++.++.. .++.+.+.+
T Consensus 209 ~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~ 240 (245)
T PRK12936 209 RMGTGAEVASAVAYLASSEAAYVTGQTIHVNG 240 (245)
T ss_pred CCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence 245689999999888876432 367788774
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0017 Score=49.08 Aligned_cols=120 Identities=12% Similarity=0.178 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC--------------------cccH----HHHHHHHHHcCCccEEE-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ--------------------FLDQ----LKIVHAIKVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~--------------------~~~~----~~li~aa~~~g~vkr~v- 48 (191)
+|++|.+++.++++. .|++||+++... +.+. ..++.++++.+ ..++|
T Consensus 57 ~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~ 135 (257)
T PRK07024 57 ADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVG 135 (257)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEE
Confidence 589999998887653 699999987531 1122 23455777776 66766
Q ss_pred cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|| .+... . .....|..+|..++.+.+ ..|++++.++||++........ . ..
T Consensus 136 isS~~~~~~-~----~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~----------~~ 195 (257)
T PRK07024 136 IASVAGVRG-L----PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-----P----------YP 195 (257)
T ss_pred EechhhcCC-C----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-----C----------CC
Confidence 333 22211 0 113357788888877653 3589999999998766421110 0 00
Q ss_pred eeeecchhhHHHHHHHHhcCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~ 141 (191)
.-.+++.+|+|+.+..++.+.
T Consensus 196 ~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 196 MPFLMDADRFAARAARAIARG 216 (257)
T ss_pred CCCccCHHHHHHHHHHHHhCC
Confidence 001357999999999999864
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00088 Score=50.58 Aligned_cols=143 Identities=13% Similarity=0.040 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... ..+..++++++.. .+.-.++|.
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 138 (256)
T PRK12743 59 LDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINI 138 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 48889888777664 4799999998532 1223445555443 221135653
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+++. .++..+.++||++........ ..... ..... +....
T Consensus 139 sS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~--~~~~~--~~~~~ 209 (256)
T PRK12743 139 TSVHEHTP----LPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDVK--PDSRP--GIPLG 209 (256)
T ss_pred eeccccCC----CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHHH--HHHHh--cCCCC
Confidence 44321111 12244677788887766543 478899999998776432110 00000 00000 00011
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+.+.+|+|+++..++..+. . .++.+.+.|
T Consensus 210 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg 241 (256)
T PRK12743 210 RPGDTHEIASLVAWLCSEGASYTTGQSLIVDG 241 (256)
T ss_pred CCCCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence 24578999999988887643 2 367777774
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00071 Score=50.65 Aligned_cols=144 Identities=8% Similarity=0.068 Sum_probs=79.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHcC-----Ccc-EE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAG-----NIK-RF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g-----~vk-r~ 47 (191)
+|+.|.+++.++++ ..|+|||+++... +.+..++++++.+.- ..+ ++
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~i 138 (248)
T PRK06123 59 ADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAI 138 (248)
T ss_pred eccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEE
Confidence 48889888888775 5799999998642 122344555554321 011 34
Q ss_pred E-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 L-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
+ .|+........ .....|..+|..++.+++. .|++++++|||.+.+........+ ..+..... .
T Consensus 139 v~~sS~~~~~~~~---~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~----~~~~~~~~-~ 210 (248)
T PRK06123 139 VNVSSMAARLGSP---GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEP----GRVDRVKA-G 210 (248)
T ss_pred EEECchhhcCCCC---CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCH----HHHHHHHh-c
Confidence 4 34422111110 1113477889888876542 489999999998876532211100 00000000 0
Q ss_pred cee-eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 120 AKA-VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 120 ~~~-~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+. -..+.+|+++++..++.... ..++.+.+.|
T Consensus 211 ~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g 246 (248)
T PRK06123 211 IPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVSG 246 (248)
T ss_pred CCCCCCcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence 011 12468999999999887542 2367777763
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00091 Score=50.52 Aligned_cols=144 Identities=9% Similarity=0.116 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... ..+ .+.++..+++.+ ..+++.
T Consensus 70 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~i 148 (258)
T PRK06935 70 VDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINI 148 (258)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEE
Confidence 58889888887775 5799999998531 112 233445555665 556553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|...+.+.+. .|+..+.++||++.......... .....-... ......
T Consensus 149 sS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~-~~~~~~ 221 (258)
T PRK06935 149 ASMLSFQGG----KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA--DKNRNDEIL-KRIPAG 221 (258)
T ss_pred CCHHhccCC----CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc--ChHHHHHHH-hcCCCC
Confidence 432211110 1123567788888776553 47889999999876543211100 000000000 000012
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+...+|+|..+..++.+.. . .++++.+.|
T Consensus 222 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 253 (258)
T PRK06935 222 RWGEPDDLMGAAVFLASRASDYVNGHILAVDG 253 (258)
T ss_pred CCCCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence 35678999999998887643 2 366677663
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00068 Score=50.54 Aligned_cols=167 Identities=14% Similarity=0.153 Sum_probs=101.5
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCC---ccEEEcC--C-cccCCC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGN---IKRFLPS--E-FGCEED 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~---vkr~v~s--~-~g~~~~ 57 (191)
||++|...|.+.+. ..+-|||+++... ..++.+|++|.+.++- ||.+-.| + ||--..
T Consensus 90 gDmTDss~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e 169 (376)
T KOG1372|consen 90 GDMTDSSCLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQE 169 (376)
T ss_pred ccccchHHHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccC
Confidence 79999999998886 5688899888653 2457999999998761 3333333 2 663211
Q ss_pred ----CCCCCCCchhhHHHHHHHH----HHHHhcCCCeEEEeccccccccccc----cc---------CCCCCCceEEEec
Q 038413 58 ----RVRPLPPFEAYLEKKRIVR----RAIEAVEIPYTFVSANCYGAYFVNV----LL---------RPFEPHDDVVVYG 116 (191)
Q Consensus 58 ----~~~~~~~~~~~~~~k~~~e----~~l~~~~~~~tilrp~~~~~~~~~~----~~---------~~~~~~~~~~~~~ 116 (191)
+..+..|.+||..+|...- .+=+++++= -+.|..+..-.|+ |. .+.+....-...|
T Consensus 170 ~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmf---AcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LG 246 (376)
T KOG1372|consen 170 IPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMF---ACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELG 246 (376)
T ss_pred CCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcce---eeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEec
Confidence 1223457788887775331 111111110 0111111110111 10 1112222334566
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
+-+.+++|-+..|.++++-.+|++... ..|.|+. ++.-|.+|+.+.-=...|+.
T Consensus 247 NL~a~RDWGhA~dYVEAMW~mLQ~d~P--dDfViAT-ge~hsVrEF~~~aF~~ig~~ 300 (376)
T KOG1372|consen 247 NLSALRDWGHAGDYVEAMWLMLQQDSP--DDFVIAT-GEQHSVREFCNLAFAEIGEV 300 (376)
T ss_pred chhhhcccchhHHHHHHHHHHHhcCCC--CceEEec-CCcccHHHHHHHHHHhhCcE
Confidence 778889999999999999888887542 4566664 79999999999887777754
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0012 Score=49.74 Aligned_cols=148 Identities=10% Similarity=0.096 Sum_probs=80.8
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHHH----c-CCccEEEc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIKV----A-GNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~-g~vkr~v~ 49 (191)
+|+.|.+++.++++. .|+|||+++... ..+..++++++.. . + ..++|.
T Consensus 54 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~ii~ 132 (252)
T PRK07856 54 ADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG-GGSIVN 132 (252)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEE
Confidence 588898888887754 599999997532 1233445555442 2 2 346553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|..++.+++. ..+....++||+........... ...............
T Consensus 133 isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~ 205 (252)
T PRK07856 133 IGSVSGRRPS----PGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYG---DAEGIAAVAATVPLG 205 (252)
T ss_pred EcccccCCCC----CCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhcc---CHHHHHHHhhcCCCC
Confidence 443221111 1234577889888877764 12566778898776543211100 000000000000012
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
.+...+|+|+.+..++.++. . -++.+.+.+ +...
T Consensus 206 ~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdg-g~~~ 241 (252)
T PRK07856 206 RLATPADIAWACLFLASDLASYVSGANLEVHG-GGER 241 (252)
T ss_pred CCcCHHHHHHHHHHHcCcccCCccCCEEEECC-Ccch
Confidence 24578999999999887643 2 367778875 4443
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0016 Score=48.43 Aligned_cols=118 Identities=10% Similarity=0.119 Sum_probs=73.9
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCC-CC-------------------cccHHHHHHHH----HHcCCccEEEc-CCc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAY-PQ-------------------FLDQLKIVHAI----KVAGNIKRFLP-SEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~-~~-------------------~~~~~~li~aa----~~~g~vkr~v~-s~~ 52 (191)
+|+.|.+++.++++ ..|+|||+++. .. ..+..++++++ ++.+ ..+++. |+.
T Consensus 56 ~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~ 134 (238)
T PRK08264 56 LDVTDPASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSV 134 (238)
T ss_pred ecCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCh
Confidence 58899999888876 47999999987 21 12334555554 3455 667763 432
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
..... ..+...|..+|..++.+.+. .++++++++|+........ .. ....+
T Consensus 135 ~~~~~----~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~----------------~~--~~~~~ 192 (238)
T PRK08264 135 LSWVN----FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA----------------GL--DAPKA 192 (238)
T ss_pred hhccC----CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc----------------cC--CcCCC
Confidence 21111 12234577788888766543 4889999999876442100 00 11257
Q ss_pred chhhHHHHHHHHhcCc
Q 038413 126 YEEDIAKCTIKVINDP 141 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~ 141 (191)
+.+|+++.++..+...
T Consensus 193 ~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 193 SPADVARQILDALEAG 208 (238)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 7899999999988763
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00097 Score=52.05 Aligned_cols=139 Identities=14% Similarity=0.070 Sum_probs=78.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------cc----cHHHHHHHHHHcCCccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------FL----DQLKIVHAIKVAGNIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------~~----~~~~li~aa~~~g~vkr~v~-s~ 51 (191)
+|+.|.+++.++++ ++|+|||+++... .. .+..++.++++.+ ..|+|. |+
T Consensus 78 ~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS 156 (315)
T PRK06196 78 LDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSS 156 (315)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECC
Confidence 58899888877663 5899999998531 11 1355666777776 567663 44
Q ss_pred cccCC-----CC---CCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEec
Q 038413 52 FGCEE-----DR---VRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG 116 (191)
Q Consensus 52 ~g~~~-----~~---~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (191)
.+... .. .....+...|..+|...+.+.+ ..|+.++.++||++.++........ .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~ 234 (315)
T PRK06196 157 AGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPRE--EQVALGWVD 234 (315)
T ss_pred HHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChh--hhhhhhhhh
Confidence 32111 00 0011223457788888776543 2589999999999877643221100 000000000
Q ss_pred CCccee--eecchhhHHHHHHHHhcCcc
Q 038413 117 NGEAKA--VFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 117 ~g~~~~--~~i~~~Dva~~~~~~l~~~~ 142 (191)
....+. .+...+|+|..++.++..++
T Consensus 235 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 262 (315)
T PRK06196 235 EHGNPIDPGFKTPAQGAATQVWAATSPQ 262 (315)
T ss_pred hhhhhhhhhcCCHhHHHHHHHHHhcCCc
Confidence 000011 24568999999999887654
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0011 Score=49.99 Aligned_cols=152 Identities=11% Similarity=0.056 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHhh-------ccCcEEEEccCCCC---------------------ccc----HHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSIL-------KEVDVVISTVAYPQ---------------------FLD----QLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~g~d~V~~~~~~~~---------------------~~~----~~~li~aa~~~g~vkr~v 48 (191)
+|+.|.+++.+++ .+.|+|||+++... ..+ .+.++..+++.+ ..++|
T Consensus 56 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii 134 (260)
T PRK06523 56 ADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVII 134 (260)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEE
Confidence 5888888776554 35799999998421 111 234455556666 56666
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-C----CCC--C--ce
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-P----FEP--H--DD 111 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-~----~~~--~--~~ 111 (191)
. |+....... ..+...|..+|..++.+++. .|+....++||.+.......+.. . ... . ..
T Consensus 135 ~isS~~~~~~~---~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 211 (260)
T PRK06523 135 HVTSIQRRLPL---PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQI 211 (260)
T ss_pred EEecccccCCC---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHH
Confidence 3 432211110 11244677888888766543 47899999999887653221100 0 000 0 00
Q ss_pred E-EEecCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccC
Q 038413 112 V-VVYGNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 112 ~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
+ ... .+.....+...+|+|+++..++.+.. . -++.+.+.| +...|
T Consensus 212 ~~~~~-~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdg-g~~~~ 259 (260)
T PRK06523 212 IMDSL-GGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDG-GTVPT 259 (260)
T ss_pred HHHHh-ccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecC-CccCC
Confidence 0 000 00001124578999999999987642 2 367788874 55544
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0016 Score=48.88 Aligned_cols=143 Identities=10% Similarity=0.161 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhcc--------CcEEEEccCCC---------C----------------cccHHHHHHHHH----HcCC
Q 038413 1 GELDEHEKIVSILKE--------VDVVISTVAYP---------Q----------------FLDQLKIVHAIK----VAGN 43 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--------~d~V~~~~~~~---------~----------------~~~~~~li~aa~----~~g~ 43 (191)
+|+.|.+++.++++. .|++||+++.. . ..+..++++++. +.+
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~- 137 (253)
T PRK08642 59 ADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG- 137 (253)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-
Confidence 588898888877753 89999998641 0 123345555554 444
Q ss_pred ccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEe
Q 038413 44 IKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY 115 (191)
Q Consensus 44 vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~ 115 (191)
..+++. ++..... ...+...|..+|...+.+++. .|+....++||++......... ........
T Consensus 138 ~g~iv~iss~~~~~----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~ 209 (253)
T PRK08642 138 FGRIINIGTNLFQN----PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT----PDEVFDLI 209 (253)
T ss_pred CeEEEEECCccccC----CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC----CHHHHHHH
Confidence 456653 3321111 112345688899998888764 3677888999987553211100 00000000
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
........+.+.+|+|+++..++.++. .-|+.+.+.|
T Consensus 210 ~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdg 248 (253)
T PRK08642 210 AATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDG 248 (253)
T ss_pred HhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence 001111246789999999999998643 2367777764
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0016 Score=49.15 Aligned_cols=144 Identities=8% Similarity=0.059 Sum_probs=79.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... +.+. +.++.++++.+ ..++|.
T Consensus 65 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~i 143 (254)
T PRK06114 65 ADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNI 143 (254)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEE
Confidence 48889888887765 3599999998632 1222 33445555555 456653
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+...... .+...|..+|..++.+.+. .|+....++||++....... +.... ...........
T Consensus 144 sS~~~~~~~~~---~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~---~~~~~-~~~~~~~~~p~ 216 (254)
T PRK06114 144 ASMSGIIVNRG---LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR---PEMVH-QTKLFEEQTPM 216 (254)
T ss_pred CchhhcCCCCC---CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc---ccchH-HHHHHHhcCCC
Confidence 33 22211110 1123567788877766543 47889999999876543211 10000 00000000000
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|+|+.++.++.+.. . -++.+.+.|
T Consensus 217 ~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dg 249 (254)
T PRK06114 217 QRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDG 249 (254)
T ss_pred CCCcCHHHHHHHHHHHcCccccCcCCceEEECc
Confidence 124568999999999887643 2 256777763
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0014 Score=49.60 Aligned_cols=128 Identities=19% Similarity=0.153 Sum_probs=72.3
Q ss_pred CCCCCHHHHHHhhcc--------CcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEE-
Q 038413 1 GELDEHEKIVSILKE--------VDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--------~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v- 48 (191)
+|+.|.+++.+++++ .|+|+|+++... ..+..+++++ ++..+ ..+++
T Consensus 55 ~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~ 133 (260)
T PRK08267 55 LDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVIN 133 (260)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEE
Confidence 588998888877653 599999998642 1223334444 44454 45655
Q ss_pred cCCc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|+. +... . .....|..+|..++.+.+. .+++++.++||++.......... . ...... ..
T Consensus 134 isS~~~~~~-~----~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~---~-~~~~~~---~~ 201 (260)
T PRK08267 134 TSSASAIYG-Q----PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN---E-VDAGST---KR 201 (260)
T ss_pred eCchhhCcC-C----CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccc---h-hhhhhH---hh
Confidence 3432 2211 1 1123466788877665543 47999999999876543221000 0 000000 00
Q ss_pred eeeecchhhHHHHHHHHhcCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~ 141 (191)
....+..+|+|+++..++.++
T Consensus 202 ~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 202 LGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred ccCCCCHHHHHHHHHHHHhCC
Confidence 112356799999999999764
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0012 Score=49.85 Aligned_cols=147 Identities=7% Similarity=0.012 Sum_probs=80.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... ..+..+++++ +++.+ ..++|.
T Consensus 65 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~i 143 (260)
T PRK07063 65 ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNI 143 (260)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEE
Confidence 48889888887765 5899999998531 1222333343 44455 456663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCc-eEEEecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHD-DVVVYGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~ 121 (191)
|+....... .....|..+|..++.+.+. .|+....++||++.......+........ ...........
T Consensus 144 sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
T PRK07063 144 ASTHAFKII----PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM 219 (260)
T ss_pred CChhhccCC----CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC
Confidence 442211111 1234577889888877653 47888889999876543221110000000 00000000000
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|+|.+++.++.++. . -++.+.+.|
T Consensus 220 ~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdg 252 (260)
T PRK07063 220 KRIGRPEEVAMTAVFLASDEAPFINATCITIDG 252 (260)
T ss_pred CCCCCHHHHHHHHHHHcCccccccCCcEEEECC
Confidence 124578999999999887643 2 356677764
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0032 Score=48.74 Aligned_cols=123 Identities=10% Similarity=0.141 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------ccc----HHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLD----QLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~----~~~li~aa~~~g~vkr~v 48 (191)
+|+.|.+++.++++ +.|++||+++... ..+ ...++..+++.+ ..++|
T Consensus 96 ~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv 174 (293)
T PRK05866 96 CDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHII 174 (293)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEE
Confidence 58899998888776 6899999997531 011 233444555677 67776
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
. |+.+...... .....|..+|..++.+.+. .|+..+.++||.+........ . .. .
T Consensus 175 ~isS~~~~~~~~---p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~-----~----~~--~--- 237 (293)
T PRK05866 175 NVATWGVLSEAS---PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT-----K----AY--D--- 237 (293)
T ss_pred EECChhhcCCCC---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc-----c----cc--c---
Confidence 3 5443211110 1134577889888766543 478899999996554321110 0 00 0
Q ss_pred eeeecchhhHHHHHHHHhcCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~ 141 (191)
....++.+++|+.++.++.+.
T Consensus 238 ~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 238 GLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred CCCCCCHHHHHHHHHHHHhcC
Confidence 123468999999999999864
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0025 Score=48.31 Aligned_cols=142 Identities=13% Similarity=0.095 Sum_probs=81.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH-----cCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV-----AGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~-----~g~vkr~v~ 49 (191)
+|++|.+++.++++ ++|+|||+++... ..+..++.+++.. .+ ..+++.
T Consensus 66 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~ 144 (263)
T PRK07814 66 ADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVIN 144 (263)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEE
Confidence 48889988877765 5799999987421 2334566666653 34 456663
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceE-EEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDV-VVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~ 120 (191)
|+ .+.. . ..+...|..+|..++.+.+. .++..+.++||+........... ..... .+.+ ...
T Consensus 145 ~sS~~~~~-~----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~-~~~ 215 (263)
T PRK07814 145 ISSTMGRL-A----GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAA---NDELRAPMEK-ATP 215 (263)
T ss_pred EccccccC-C----CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccC---CHHHHHHHHh-cCC
Confidence 43 2321 1 12344678899888877664 24667788898765432211100 00000 0000 001
Q ss_pred eeeecchhhHHHHHHHHhcCc-c-cCCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDP-R-TCNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~~ 152 (191)
...+...+|+|++++.++.+. . ..++.+.+.+
T Consensus 216 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~ 249 (263)
T PRK07814 216 LRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDG 249 (263)
T ss_pred CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence 122457899999999998764 2 3366677763
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.002 Score=47.95 Aligned_cols=140 Identities=12% Similarity=0.082 Sum_probs=79.8
Q ss_pred CCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEE-cC
Q 038413 2 ELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFL-PS 50 (191)
Q Consensus 2 D~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v-~s 50 (191)
|++|.+++.+++ ..+|++++.+|... +.+. ..++-.+.+.+ --++| .|
T Consensus 61 DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~ 139 (246)
T COG4221 61 DVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLG 139 (246)
T ss_pred ccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEec
Confidence 889988855554 35899999998652 2233 33444444554 33555 34
Q ss_pred CcccCCCCCCCCCC-chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 51 EFGCEEDRVRPLPP-FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 51 ~~g~~~~~~~~~~~-~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|..-... .| ..-|..+|+.+..+... .++..|.+.||...+-.++..-. ++..-.... --...
T Consensus 140 SiAG~~~-----y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~---~g~~~~~~~-~y~~~ 210 (246)
T COG4221 140 SIAGRYP-----YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRF---EGDDERADK-VYKGG 210 (246)
T ss_pred ccccccc-----CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccC---CchhhhHHH-HhccC
Confidence 4321111 12 23466788887766432 57889999999865433222111 110000000 00123
Q ss_pred eecchhhHHHHHHHHhcCcccCC-ceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCN-RIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~-~~~~i~ 151 (191)
.++..+|||+.+..+++.|++.+ ..+.+.
T Consensus 211 ~~l~p~dIA~~V~~~~~~P~~vnI~ei~i~ 240 (246)
T COG4221 211 TALTPEDIAEAVLFAATQPQHVNINEIEIM 240 (246)
T ss_pred CCCCHHHHHHHHHHHHhCCCccccceEEEe
Confidence 57889999999999999997654 334443
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.002 Score=49.81 Aligned_cols=143 Identities=9% Similarity=0.122 Sum_probs=81.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHc--CCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVA--GNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~--g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++++++.+. . -.++|. |
T Consensus 103 ~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-~g~iV~is 181 (290)
T PRK06701 103 GDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-GSAIINTG 181 (290)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-CCeEEEEe
Confidence 58889888877764 4799999988521 12345566665542 1 135553 3
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+....... .....|..+|...+.+.+. .|+..+.++||++.....+... ................
T Consensus 182 S~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~----~~~~~~~~~~~~~~~~ 253 (290)
T PRK06701 182 SITGYEGN----ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF----DEEKVSQFGSNTPMQR 253 (290)
T ss_pred cccccCCC----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc----CHHHHHHHHhcCCcCC
Confidence 32211111 1123466788877766543 4788999999987664322110 0000000111112234
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+.+.+|+|+++..++.+.. -.+..+.+.+
T Consensus 254 ~~~~~dva~~~~~ll~~~~~~~~G~~i~idg 284 (290)
T PRK06701 254 PGQPEELAPAYVFLASPDSSYITGQMLHVNG 284 (290)
T ss_pred CcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence 6789999999999988743 2357777764
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0014 Score=49.10 Aligned_cols=147 Identities=13% Similarity=0.076 Sum_probs=79.1
Q ss_pred CCCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------cccHHHHHHHHHH---cCCccEEEcCC
Q 038413 1 GELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------FLDQLKIVHAIKV---AGNIKRFLPSE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~~~~~~li~aa~~---~g~vkr~v~s~ 51 (191)
+|+.|.+++.+++ .++|+|||+++... ..+..++++++.. .+ .+.++.++
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~i~~~S 137 (249)
T PRK06500 59 ADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP-ASIVLNGS 137 (249)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEec
Confidence 3777777655443 25799999998532 2335677777764 23 23344333
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC-CCCCceEEEecCCcceee
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP-FEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~ 123 (191)
....... .....|..+|...+.+++. .|++.++++||.+........... ..........-......-
T Consensus 138 ~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (249)
T PRK06500 138 INAHIGM----PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGR 213 (249)
T ss_pred hHhccCC----CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCC
Confidence 2211111 1234677889888877642 478999999998876532211100 000000000000000012
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+.+.+|+|+++..++.++. ..+..+.+.|
T Consensus 214 ~~~~~~va~~~~~l~~~~~~~~~g~~i~~~g 244 (249)
T PRK06500 214 FGTPEEIAKAVLYLASDESAFIVGSEIIVDG 244 (249)
T ss_pred CcCHHHHHHHHHHHcCccccCccCCeEEECC
Confidence 4578999999999887643 2255566653
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0027 Score=47.74 Aligned_cols=84 Identities=13% Similarity=-0.029 Sum_probs=48.8
Q ss_pred hhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 66 EAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
..|..+|..++.+++. .|+....+.||++............ .... ..........+.+.+|+|+++..++
T Consensus 156 ~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~dva~~~~~l~ 232 (252)
T PRK12747 156 IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDP-MMKQ--YATTISAFNRLGEVEDIADTAAFLA 232 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCH-HHHH--HHHhcCcccCCCCHHHHHHHHHHHc
Confidence 4677899988877653 4788999999987665322111000 0000 0000001124678999999998887
Q ss_pred cCcc-c-CCceeEeec
Q 038413 139 NDPR-T-CNRIVIYRP 152 (191)
Q Consensus 139 ~~~~-~-~~~~~~i~~ 152 (191)
.... . -++.+.+.|
T Consensus 233 s~~~~~~~G~~i~vdg 248 (252)
T PRK12747 233 SPDSRWVTGQLIDVSG 248 (252)
T ss_pred CccccCcCCcEEEecC
Confidence 7532 2 256677763
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0013 Score=49.33 Aligned_cols=147 Identities=12% Similarity=0.105 Sum_probs=78.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.+++. ..|+|||+++... +.+. ..++..+++.+.-.+++.
T Consensus 56 ~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~ 135 (254)
T TIGR02415 56 LDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINA 135 (254)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 58899998887764 4699999998632 1111 233444454441245553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEe------c
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY------G 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~------~ 116 (191)
|+....... .....|..+|...+.+.+. .++..+.++||++...................+. .
T Consensus 136 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (254)
T TIGR02415 136 ASIAGHEGN----PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFS 211 (254)
T ss_pred cchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHH
Confidence 432211111 1234577788888766643 3688888999987554321111000000000000 0
Q ss_pred CCcceeeecchhhHHHHHHHHhcCccc--CCceeEee
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYR 151 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~ 151 (191)
.......+.+.+|+++++..++.++.. .++.+.+.
T Consensus 212 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d 248 (254)
T TIGR02415 212 SEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVD 248 (254)
T ss_pred hhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEec
Confidence 000012367889999999999987542 25566665
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0019 Score=48.64 Aligned_cols=144 Identities=13% Similarity=0.142 Sum_probs=80.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------c----ccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------F----LDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~----~~~~~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ..|++||+++... . ...+.++..+++.+ -.+++.
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~ 140 (254)
T PRK07478 62 GDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIF 140 (254)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEE
Confidence 48889888877765 5799999998531 0 11234456666665 556663
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+..... .+...|..+|...+.+.+. .|+..+.++||+............ . ...........
T Consensus 141 ~sS~~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~-~~~~~~~~~~~ 213 (254)
T PRK07478 141 TSTFVGHTAGF----PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT--P-EALAFVAGLHA 213 (254)
T ss_pred EechHhhccCC----CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC--H-HHHHHHHhcCC
Confidence 43 2321111 1234577888888766543 478888999998765422111000 0 00000000000
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
...+...+|+|+.++.++.++. . -++.+.+.+
T Consensus 214 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg 247 (254)
T PRK07478 214 LKRMAQPEEIAQAALFLASDAASFVTGTALLVDG 247 (254)
T ss_pred CCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCC
Confidence 1234678999999999887643 2 256667753
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0013 Score=49.08 Aligned_cols=143 Identities=8% Similarity=0.053 Sum_probs=75.6
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC--------------------cccHHHHHHHHHH----c--CCccEE
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ--------------------FLDQLKIVHAIKV----A--GNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~--------------------~~~~~~li~aa~~----~--g~vkr~ 47 (191)
+|+.|.+++.++++. .|+|||+++... ..+..++++++.. . +.-.+|
T Consensus 58 ~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (247)
T PRK09730 58 ADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAI 137 (247)
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 589999988887764 589999998531 0112222333222 1 101345
Q ss_pred Ec-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 LP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|. |+.+...... .....|..+|..++.+++. .+++++.+|||.++++.......... ..... ..
T Consensus 138 v~~sS~~~~~~~~---~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~---~~~~~--~~ 209 (247)
T PRK09730 138 VNVSSAASRLGAP---GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGR---VDRVK--SN 209 (247)
T ss_pred EEECchhhccCCC---CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHH---HHHHH--hc
Confidence 53 4432111111 1123477788877766542 48999999999988753221100000 00000 00
Q ss_pred cee-eecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 120 AKA-VFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 120 ~~~-~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
.+. -..+.+|+|+++..++.++. ..++.+.+.
T Consensus 210 ~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~ 244 (247)
T PRK09730 210 IPMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLA 244 (247)
T ss_pred CCCCCCcCHHHHHHHHHhhcChhhcCccCcEEecC
Confidence 001 12368999999998887643 235566665
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0035 Score=47.44 Aligned_cols=147 Identities=9% Similarity=0.067 Sum_probs=80.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHH----HHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... ..+...+++ .+++.+ ..++|.
T Consensus 51 ~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i 129 (258)
T PRK06398 51 VDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINI 129 (258)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEe
Confidence 58899888877764 5799999988532 122233444 444455 556663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCC--CCCc----eEEEecC
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPF--EPHD----DVVVYGN 117 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~--~~~~----~~~~~~~ 117 (191)
|+...... ..+...|..+|..++.+.+. .++....++||++............ .... ....++.
T Consensus 130 sS~~~~~~----~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (258)
T PRK06398 130 ASVQSFAV----TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGE 205 (258)
T ss_pred CcchhccC----CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhh
Confidence 44221111 12234577788888777653 2377788999987654322211000 0000 0000111
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
......+...+|+|+++..++.++. . .++.+.+.+
T Consensus 206 ~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dg 242 (258)
T PRK06398 206 MHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDG 242 (258)
T ss_pred cCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence 1111235678999999999887642 2 366677764
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0048 Score=46.16 Aligned_cols=121 Identities=15% Similarity=0.158 Sum_probs=72.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHH----HHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIV----HAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li----~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... ..+..+++ +.+++.+ ..++|.
T Consensus 60 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ 138 (248)
T PRK08251 60 LDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLI 138 (248)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEE
Confidence 58889888776654 5899999997532 11222333 4445666 677664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+..... ..+...|..+|..++.+.+. .++.++.++||++........ . . ..
T Consensus 139 sS~~~~~~~---~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-----~----------~-~~ 199 (248)
T PRK08251 139 SSVSAVRGL---PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-----K----------S-TP 199 (248)
T ss_pred eccccccCC---CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-----c----------c-CC
Confidence 432211110 11234577888877766542 478889999998655321110 0 0 12
Q ss_pred eecchhhHHHHHHHHhcCc
Q 038413 123 VFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~ 141 (191)
.+++.+|.|+.++..++..
T Consensus 200 ~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 200 FMVDTETGVKALVKAIEKE 218 (248)
T ss_pred ccCCHHHHHHHHHHHHhcC
Confidence 3577899999999999764
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0029 Score=47.39 Aligned_cols=145 Identities=9% Similarity=0.108 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+++|+++... ..+..++++++. +.+.-.++|.
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ 138 (248)
T TIGR01832 59 ADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINI 138 (248)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 48888888876653 4899999997532 122334555543 3321235553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|..++.+.+. .|+..+.++||++.................+ . ......
T Consensus 139 sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~-~~~~~~ 211 (248)
T TIGR01832 139 ASMLSFQGG----IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAI--L-ERIPAG 211 (248)
T ss_pred ecHHhccCC----CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHH--H-hcCCCC
Confidence 332111110 1123567788888776653 3788999999987665322110000000000 0 000113
Q ss_pred eecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
.++..+|+|+++..++..+.. .++.+.+.|
T Consensus 212 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 243 (248)
T TIGR01832 212 RWGTPDDIGGPAVFLASSASDYVNGYTLAVDG 243 (248)
T ss_pred CCcCHHHHHHHHHHHcCccccCcCCcEEEeCC
Confidence 578899999999999976432 266666653
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0053 Score=46.55 Aligned_cols=147 Identities=10% Similarity=0.115 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.+++. ..|++||+++... ..+ ...++..+++.+ ..+++.
T Consensus 66 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i 144 (265)
T PRK07097 66 CDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINI 144 (265)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58899998888774 3799999998632 111 223555555565 566663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEec---CCc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG---NGE 119 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~---~g~ 119 (191)
|+....... .+...|..+|..++.+.+. .|+..+.++||++...................+.. ...
T Consensus 145 sS~~~~~~~----~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (265)
T PRK07097 145 CSMMSELGR----ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKT 220 (265)
T ss_pred cCccccCCC----CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcC
Confidence 432211111 1234577788887766553 48999999999887643221100000000000000 000
Q ss_pred ceeeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
....+...+|+|..+..++.++ .. .++.+.+.+
T Consensus 221 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g 255 (265)
T PRK07097 221 PAARWGDPEDLAGPAVFLASDASNFVNGHILYVDG 255 (265)
T ss_pred CccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence 0123556899999999999874 22 356667764
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0073 Score=45.22 Aligned_cols=147 Identities=12% Similarity=0.080 Sum_probs=80.9
Q ss_pred CCCCCHHHHHHhhc----cCcEEEEccCCCC-----------cccHHHHHHHHHHc--CCccEEEc-CC-cccCCCCC--
Q 038413 1 GELDEHEKIVSILK----EVDVVISTVAYPQ-----------FLDQLKIVHAIKVA--GNIKRFLP-SE-FGCEEDRV-- 59 (191)
Q Consensus 1 gD~~d~~~l~~a~~----g~d~V~~~~~~~~-----------~~~~~~li~aa~~~--g~vkr~v~-s~-~g~~~~~~-- 59 (191)
+|+.|.+++.++++ +.|+|||+++... ..+...+++++... . -.++|. |+ .+......
T Consensus 30 ~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~ 108 (241)
T PRK12428 30 ADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGLRHLTEALLPRMAP-GGAIVNVASLAGAEWPQRLE 108 (241)
T ss_pred ccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHHHHHHHHHHHhccC-CcEEEEeCcHHhhccccchH
Confidence 58999999988876 5899999998632 34455566666543 1 135553 33 12110000
Q ss_pred --------------------CCCCCchhhHHHHHHHHHHHH--------hcCCCeEEEecccccccccccccCCCCCCce
Q 038413 60 --------------------RPLPPFEAYLEKKRIVRRAIE--------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDD 111 (191)
Q Consensus 60 --------------------~~~~~~~~~~~~k~~~e~~l~--------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~ 111 (191)
....+...|..+|..++.+.+ ..|+..+.++||............ ......
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~-~~~~~~ 187 (241)
T PRK12428 109 LHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRS-MLGQER 187 (241)
T ss_pred HHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchh-hhhhHh
Confidence 011223467789988765532 247888999999876653222110 000000
Q ss_pred EEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 112 ~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
.. ........+...+|+|++++.++.++. -.++.+.+.
T Consensus 188 ~~--~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vd 227 (241)
T PRK12428 188 VD--SDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVD 227 (241)
T ss_pred hh--hcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEec
Confidence 00 000001124678999999999886542 225556665
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0027 Score=47.86 Aligned_cols=143 Identities=9% Similarity=0.130 Sum_probs=81.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------cccHHHHHHHHH----HcCCccEEE-cC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLDQLKIVHAIK----VAGNIKRFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~~~~li~aa~----~~g~vkr~v-~s 50 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++. +.+ ..++| .|
T Consensus 67 ~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~is 145 (255)
T PRK06113 67 CDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTIT 145 (255)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEe
Confidence 48889888877654 4699999998531 223455566554 344 34655 34
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+....... .+...|..+|...+.+++. .++..+.+.||++..........+...... ........
T Consensus 146 S~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~----~~~~~~~~ 217 (255)
T PRK06113 146 SMAAENKN----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKM----LQHTPIRR 217 (255)
T ss_pred cccccCCC----CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHH----HhcCCCCC
Confidence 42211111 1234577889888877653 467888899998765432211110000000 00000122
Q ss_pred ecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
+...+|+++++..++.... . .++.+.+.|
T Consensus 218 ~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~g 248 (255)
T PRK06113 218 LGQPQDIANAALFLCSPAASWVSGQILTVSG 248 (255)
T ss_pred CcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence 5678999999999887643 2 367778874
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0036 Score=47.04 Aligned_cols=145 Identities=9% Similarity=0.099 Sum_probs=79.9
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC--------------------cccH----HHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ--------------------FLDQ----LKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~--------------------~~~~----~~li~aa~~~g~vkr~v~ 49 (191)
+|++|.+++.++++. .|++||+++... ..+. ..++..+++.+ ..+++.
T Consensus 63 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~ 141 (253)
T PRK06172 63 CDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVN 141 (253)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 588888888877653 599999998521 0111 23334444555 456553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+....... .....|..+|..++.+.+. .|+....++||++.......... ... .....+-.....
T Consensus 142 ~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~-~~~~~~~~~~~~ 215 (253)
T PRK06172 142 TASVAGLGAA----PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE-ADP-RKAEFAAAMHPV 215 (253)
T ss_pred ECchhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc-cCh-HHHHHHhccCCC
Confidence 432211111 1234566788888776653 36888889999876543322110 000 000000000001
Q ss_pred eeecchhhHHHHHHHHhcCc-c-cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDP-R-TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~~ 152 (191)
.-+...+|+|+.+..++.+. . ..++.+.+.|
T Consensus 216 ~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dg 248 (253)
T PRK06172 216 GRIGKVEEVASAVLYLCSDGASFTTGHALMVDG 248 (253)
T ss_pred CCccCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence 12467899999999998864 3 2367777764
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0031 Score=48.05 Aligned_cols=136 Identities=14% Similarity=0.114 Sum_probs=72.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.+++. +.|+|||+++... ..+..++++++. +.+...+++.
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 136 (272)
T PRK07832 57 LDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNV 136 (272)
T ss_pred eeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 47888887776554 4799999998532 122344555542 3221345553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCC--CceEEEecCCcc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEP--HDDVVVYGNGEA 120 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~ 120 (191)
|+....... .....|..+|..++.+.+ ..++.++.++||.+..+........... ......+. ...
T Consensus 137 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (272)
T PRK07832 137 SSAAGLVAL----PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWV-DRF 211 (272)
T ss_pred ccccccCCC----CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHH-Hhc
Confidence 432211111 112345667765554443 3589999999998876543321100000 00000000 011
Q ss_pred eeeecchhhHHHHHHHHhcCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~ 141 (191)
....+..+|+|+.++.++..+
T Consensus 212 ~~~~~~~~~vA~~~~~~~~~~ 232 (272)
T PRK07832 212 RGHAVTPEKAAEKILAGVEKN 232 (272)
T ss_pred ccCCCCHHHHHHHHHHHHhcC
Confidence 123578999999999999754
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0047 Score=46.47 Aligned_cols=148 Identities=11% Similarity=0.161 Sum_probs=78.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHH----HHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQL----KIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~----~li~aa~~~g~vkr~v-~ 49 (191)
+|+.|++++.++++ +.|+|||+++... ..+.. .+++.+++.+.-.+++ .
T Consensus 58 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~ 137 (256)
T PRK08643 58 ADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINA 137 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 58999988877765 4799999997532 11122 2333333332012444 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-CCCCCceEEEe--c--C
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-PFEPHDDVVVY--G--N 117 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-~~~~~~~~~~~--~--~ 117 (191)
|+....... .....|..+|..++.+.+. .|+..+.++||++.......... ...+.+....+ . .
T Consensus 138 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (256)
T PRK08643 138 TSQAGVVGN----PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFA 213 (256)
T ss_pred CccccccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHh
Confidence 443211111 1234577888887765542 57889999999887653322110 00000000000 0 0
Q ss_pred Cc-ceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 118 GE-AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 118 g~-~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.. ....+...+|+|+++..++.+.. -.++.+.+.+
T Consensus 214 ~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdg 251 (256)
T PRK08643 214 KDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDG 251 (256)
T ss_pred ccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCC
Confidence 00 01135678999999988887642 2356666653
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0047 Score=53.42 Aligned_cols=148 Identities=12% Similarity=0.092 Sum_probs=81.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---c----------------cc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---F----------------LD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---~----------------~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|+|||+++... . .+ ...++..+++.+.-.++|.
T Consensus 472 ~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~i 551 (676)
T TIGR02632 472 MDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFI 551 (676)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 58899998888775 6899999998642 0 01 1233455555441135553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccc-ccc-cc-ccCC-----CCCCce-EE
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGA-YFV-NV-LLRP-----FEPHDD-VV 113 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~-~~~-~~-~~~~-----~~~~~~-~~ 113 (191)
|+....... .....|..+|...+.+++. .|+.+..++|+.... ..+ .. .... ...... ..
T Consensus 552 SS~~a~~~~----~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 627 (676)
T TIGR02632 552 ASKNAVYAG----KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEE 627 (676)
T ss_pred eChhhcCCC----CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHH
Confidence 432211111 1234677889888877653 378888899987652 111 00 0000 000000 00
Q ss_pred EecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 114 VYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 114 ~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+....+++.+|+|+++..++.+.. .-++.+.+.|
T Consensus 628 ~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG 668 (676)
T TIGR02632 628 HYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG 668 (676)
T ss_pred HHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence 01112222346889999999998887542 2367788874
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0037 Score=46.92 Aligned_cols=142 Identities=12% Similarity=0.077 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHH----HHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQL----KIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~----~li~aa~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ..|+++|+++... ..+.. .+++.+++.+ ..+++.
T Consensus 64 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~ 142 (252)
T PRK07035 64 CHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVN 142 (252)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEE
Confidence 47888887776654 4799999997421 11223 3344445555 566653
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+... . .+...|..+|..++.+++. .|+..+.+.||............ .............
T Consensus 143 ~sS~~~~~~-~----~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~ 214 (252)
T PRK07035 143 VASVNGVSP-G----DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFK---NDAILKQALAHIP 214 (252)
T ss_pred ECchhhcCC-C----CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccC---CHHHHHHHHccCC
Confidence 33 22211 1 1234577889888877653 47889999999876543222110 0000000000000
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
...+...+|+|+.+..++.+.. . .++.+.+.
T Consensus 215 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~d 247 (252)
T PRK07035 215 LRRHAEPSEMAGAVLYLASDASSYTTGECLNVD 247 (252)
T ss_pred CCCcCCHHHHHHHHHHHhCccccCccCCEEEeC
Confidence 1124578999999999887653 2 35666665
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.004 Score=46.97 Aligned_cols=143 Identities=9% Similarity=0.034 Sum_probs=78.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++ ++.+ ..+++.
T Consensus 67 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ 145 (257)
T PRK09242 67 ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNI 145 (257)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 48888887766553 5799999998521 12334455544 4455 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|...+.+++. .++..+.++||++........... . ......-......
T Consensus 146 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~--~-~~~~~~~~~~~~~ 218 (257)
T PRK09242 146 GSVSGLTHV----RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD--P-DYYEQVIERTPMR 218 (257)
T ss_pred CccccCCCC----CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC--h-HHHHHHHhcCCCC
Confidence 432211111 1234577788887776653 478899999998766432221100 0 0000000000001
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
-+...+|++.++..++.+.. . .++.+.+.
T Consensus 219 ~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~ 249 (257)
T PRK09242 219 RVGEPEEVAAAVAFLCMPAASYITGQCIAVD 249 (257)
T ss_pred CCcCHHHHHHHHHHHhCcccccccCCEEEEC
Confidence 23467999999988887542 2 35666775
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0048 Score=46.16 Aligned_cols=143 Identities=8% Similarity=0.112 Sum_probs=75.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHH-HHHcCCcc------E
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHA-IKVAGNIK------R 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~a-a~~~g~vk------r 46 (191)
+|+.|.+++.++++ ..|++||+++... ..+...++++ ++... .+ +
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~~~ 137 (248)
T PRK06947 59 GDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLS-TDRGGRGGA 137 (248)
T ss_pred eccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH-hcCCCCCcE
Confidence 47888887776653 5899999998531 1122344433 22221 11 3
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+........ .....|..+|..++.+.+. .++.+++++||++..........+... ...+..
T Consensus 138 ii~~sS~~~~~~~~---~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~----~~~~~~ 210 (248)
T PRK06947 138 IVNVSSIASRLGSP---NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRA----ARLGAQ 210 (248)
T ss_pred EEEECchhhcCCCC---CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHH----HHHhhc
Confidence 55 33321111100 1123577888887765542 479999999998776432211000000 000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
....-+...+|+|+.++.++.++. ..++.+.+.
T Consensus 211 ~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~ 245 (248)
T PRK06947 211 TPLGRAGEADEVAETIVWLLSDAASYVTGALLDVG 245 (248)
T ss_pred CCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeC
Confidence 000113578999999999988763 235666665
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0044 Score=47.92 Aligned_cols=143 Identities=10% Similarity=0.090 Sum_probs=80.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHc---CCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVA---GNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~---g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+++|+++... +.+...+++++... + .++|.
T Consensus 107 ~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g~iv~i 184 (294)
T PRK07985 107 GDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG--ASIITT 184 (294)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC--CEEEEE
Confidence 48888888776653 4799999987421 12344566666532 2 25553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|..++.+.+. .|+....++||+....+...... ...............
T Consensus 185 SS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~ 257 (294)
T PRK07985 185 SSIQAYQPS----PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ---TQDKIPQFGQQTPMK 257 (294)
T ss_pred CCchhccCC----CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC---CHHHHHHHhccCCCC
Confidence 442211111 1123577889888766542 48999999999887653211000 000000011111111
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+...+|||+++..++.++. . -++.+.+.|
T Consensus 258 r~~~pedva~~~~fL~s~~~~~itG~~i~vdg 289 (294)
T PRK07985 258 RAGQPAELAPVYVYLASQESSYVTAEVHGVCG 289 (294)
T ss_pred CCCCHHHHHHHHHhhhChhcCCccccEEeeCC
Confidence 35678999999999887643 2 367777764
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0071 Score=44.91 Aligned_cols=136 Identities=17% Similarity=0.120 Sum_probs=75.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------cccHHHHHHHHHH---cCCccEEE-cCCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------FLDQLKIVHAIKV---AGNIKRFL-PSEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------~~~~~~li~aa~~---~g~vkr~v-~s~~ 52 (191)
+|+.|.+++.++++ ++|.++++++... ..+...+++++.+ .+ .++| .|+.
T Consensus 60 ~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~ss~ 137 (238)
T PRK05786 60 GDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG--SSIVLVSSM 137 (238)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC--CEEEEEecc
Confidence 58889888877654 3599999987432 1111222333222 12 2444 3433
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
+..... ..+...|..+|...+..++ ..+++++++||+++++...+... .. . .. .....++
T Consensus 138 ~~~~~~---~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~---~~--~--~~---~~~~~~~ 204 (238)
T PRK05786 138 SGIYKA---SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN---WK--K--LR---KLGDDMA 204 (238)
T ss_pred hhcccC---CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh---hh--h--hc---cccCCCC
Confidence 211111 1223457778877765543 25899999999988764321100 00 0 00 0112357
Q ss_pred chhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 126 YEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
..+|+++++..++.++. ..++.+.+.
T Consensus 205 ~~~~va~~~~~~~~~~~~~~~g~~~~~~ 232 (238)
T PRK05786 205 PPEDFAKVIIWLLTDEADWVDGVVIPVD 232 (238)
T ss_pred CHHHHHHHHHHHhcccccCccCCEEEEC
Confidence 78999999999997643 235666665
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0071 Score=45.93 Aligned_cols=151 Identities=13% Similarity=0.100 Sum_probs=84.1
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|+++|+++... +...+.++..+++.+ ..++|. |
T Consensus 65 ~Dv~~~~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~is 143 (263)
T PRK08339 65 ADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYST 143 (263)
T ss_pred ecCCCHHHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEc
Confidence 58899888887765 4799999987531 112456677777776 567663 4
Q ss_pred CcccCCCCCCCCCCc-hhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC--CC---CC-CceEEEec
Q 038413 51 EFGCEEDRVRPLPPF-EAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR--PF---EP-HDDVVVYG 116 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~-~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~--~~---~~-~~~~~~~~ 116 (191)
+...... .|. ..|..+|..++.+.+. .|+....+.||++.......... .. .. ........
T Consensus 144 S~~~~~~-----~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (263)
T PRK08339 144 SVAIKEP-----IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYA 218 (263)
T ss_pred CccccCC-----CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHh
Confidence 4321111 122 2355678777665542 57888999999876543221100 00 00 00000000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
......-+...+|+|+++..++.++. . -++.+.+.| +...|
T Consensus 219 ~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdg-G~~~~ 261 (263)
T PRK08339 219 KPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDG-GRLNS 261 (263)
T ss_pred ccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECC-Ccccc
Confidence 00001125678999999998887643 2 256677764 44443
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0093 Score=44.55 Aligned_cols=120 Identities=14% Similarity=0.132 Sum_probs=72.5
Q ss_pred CCCCCHHHHHHhhc----cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-CC-
Q 038413 1 GELDEHEKIVSILK----EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP-SE- 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~----g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~-s~- 51 (191)
+|+.|.+++.++++ ..|+|+|+++... ..+..+++++ +++.+ ..+++. |+
T Consensus 58 ~Dl~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~ 136 (243)
T PRK07102 58 LDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSV 136 (243)
T ss_pred cCCCChHHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecc
Confidence 48888888877665 3699999887531 1223334444 44456 667663 33
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeee
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
.+.. .. .....|..+|..++.+.+ ..|+.++.++||+......... . .+ ...+
T Consensus 137 ~~~~-~~----~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-----~-----~~-----~~~~ 196 (243)
T PRK07102 137 AGDR-GR----ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-----K-----LP-----GPLT 196 (243)
T ss_pred cccC-CC----CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-----C-----CC-----cccc
Confidence 2221 11 112356778877665543 3588999999998766421110 0 00 1235
Q ss_pred cchhhHHHHHHHHhcCc
Q 038413 125 NYEEDIAKCTIKVINDP 141 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~ 141 (191)
.+.+|+|+.++..+..+
T Consensus 197 ~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 197 AQPEEVAKDIFRAIEKG 213 (243)
T ss_pred CCHHHHHHHHHHHHhCC
Confidence 67999999999998864
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0099 Score=46.89 Aligned_cols=129 Identities=16% Similarity=0.163 Sum_probs=73.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHH----HHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLK----IVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~----li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..+ ++..+++.+ -.++|.
T Consensus 63 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~i 141 (330)
T PRK06139 63 TDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINM 141 (330)
T ss_pred eeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 48899988887763 5799999998532 112222 333445554 345553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh--------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA--------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
++.+..... .....|..+|..++.+.+. .++..+.+.||.+...+....... ... ....+
T Consensus 142 sS~~~~~~~----p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~--~~~------~~~~~ 209 (330)
T PRK06139 142 ISLGGFAAQ----PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY--TGR------RLTPP 209 (330)
T ss_pred cChhhcCCC----CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc--ccc------cccCC
Confidence 332211110 1123577788876555432 268888899998766532211000 000 00112
Q ss_pred eeecchhhHHHHHHHHhcCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~ 142 (191)
..+.+.+|+|++++.++.+++
T Consensus 210 ~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 210 PPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred CCCCCHHHHHHHHHHHHhCCC
Confidence 346789999999999998764
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.009 Score=45.60 Aligned_cols=147 Identities=10% Similarity=0.043 Sum_probs=80.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC----------------------------------ccc----HHHHH
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ----------------------------------FLD----QLKIV 35 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~----------------------------------~~~----~~~li 35 (191)
+|+.|.+++.++++ .+|++||+++... +.+ .+.++
T Consensus 66 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 145 (278)
T PRK08277 66 ADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFA 145 (278)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 58888888776654 5899999988321 001 12445
Q ss_pred HHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCC-
Q 038413 36 HAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPF- 106 (191)
Q Consensus 36 ~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~- 106 (191)
..+++.+ -.++|. |+....... .+...|..+|..++.+++. .|+....++||++.......+....
T Consensus 146 ~~~~~~~-~g~ii~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~ 220 (278)
T PRK08277 146 KDMVGRK-GGNIINISSMNAFTPL----TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNED 220 (278)
T ss_pred HHHHhcC-CcEEEEEccchhcCCC----CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhcccc
Confidence 5565565 456653 432211111 1234577889888877653 3788899999988765322211000
Q ss_pred -CCCceEEEecCCcceeeecchhhHHHHHHHHhcC-cc-c-CCceeEeec
Q 038413 107 -EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVIND-PR-T-CNRIVIYRP 152 (191)
Q Consensus 107 -~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~-~~-~-~~~~~~i~~ 152 (191)
................-+...+|+|++++.++.+ .. . -++.+.+.|
T Consensus 221 ~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdg 270 (278)
T PRK08277 221 GSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDG 270 (278)
T ss_pred ccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECC
Confidence 0000000000011112356789999999998876 33 2 267777764
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0049 Score=46.41 Aligned_cols=142 Identities=12% Similarity=0.087 Sum_probs=79.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccHHHHHHHHHH---cCCccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQLKIVHAIKV---AGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~~~li~aa~~---~g~vkr~v- 48 (191)
+|+.|.+++.++++ .+|++||+++... +.+..++++++.+ .. -.++|
T Consensus 63 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~ 141 (255)
T PRK05717 63 MDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVN 141 (255)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEE
Confidence 58889888766553 3699999998531 2245677777753 11 23444
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCC-cce
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG-EAK 121 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~ 121 (191)
.|+....... .....|..+|..++.+.+. .++....++||++.......... . ........ ...
T Consensus 142 ~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~---~--~~~~~~~~~~~~ 212 (255)
T PRK05717 142 LASTRARQSE----PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRA---E--PLSEADHAQHPA 212 (255)
T ss_pred EcchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccc---h--HHHHHHhhcCCC
Confidence 3442211111 1133577889888877653 24677889999877643211100 0 00000000 001
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+.+.+|+|.++..++.+.. ..++.+.+.+
T Consensus 213 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g 245 (255)
T PRK05717 213 GRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDG 245 (255)
T ss_pred CCCcCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence 235688999999988886542 2356666653
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0073 Score=45.73 Aligned_cols=145 Identities=10% Similarity=0.035 Sum_probs=77.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------cccHHHHHHHHHH---cCCccEEE-cCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLDQLKIVHAIKV---AGNIKRFL-PSE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~~~~li~aa~~---~g~vkr~v-~s~ 51 (191)
+|+.|.+++.++++ ..|++||+++... +.+...+++++.. .+ -.++| .|+
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~ii~isS 137 (261)
T PRK08265 59 TDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARG-GGAIVNFTS 137 (261)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC-CcEEEEECc
Confidence 58899988877765 4699999988531 1122233333322 22 23554 333
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce-ee
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK-AV 123 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 123 (191)
....... .....|..+|..++.+.+. .|+.++.++||++........... .............+ .-
T Consensus 138 ~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~--~~~~~~~~~~~~~p~~r 211 (261)
T PRK08265 138 ISAKFAQ----TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGG--DRAKADRVAAPFHLLGR 211 (261)
T ss_pred hhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhccc--chhHHHHhhcccCCCCC
Confidence 2211111 1133567788887766553 478899999998765432221100 00000000000001 12
Q ss_pred ecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
+...+|+|+++..++.++. . -++.+.+.|
T Consensus 212 ~~~p~dva~~~~~l~s~~~~~~tG~~i~vdg 242 (261)
T PRK08265 212 VGDPEEVAQVVAFLCSDAASFVTGADYAVDG 242 (261)
T ss_pred ccCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence 4578999999999987643 2 366777764
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.014 Score=44.04 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=78.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|+|||+++... +.+..++++++.. .+ ..+++.
T Consensus 74 ~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ 152 (256)
T PRK12748 74 IDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINL 152 (256)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEE
Confidence 48888888776664 4699999997531 1234555655543 23 346653
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ......|..+|...+.+++. .++..+.++||.+...+..... ........ . ..
T Consensus 153 ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~----~~~~~~~~-~---~~ 220 (256)
T PRK12748 153 TSGQSLGP----MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEEL----KHHLVPKF-P---QG 220 (256)
T ss_pred CCccccCC----CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhH----HHhhhccC-C---CC
Confidence 33211110 01234577889888877553 4788999999986653221100 00000000 0 01
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|+|+.+..++.... ..++.+++.+
T Consensus 221 ~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~ 252 (256)
T PRK12748 221 RVGEPVDAARLIAFLVSEEAKWITGQVIHSEG 252 (256)
T ss_pred CCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence 23457999999887776532 2367777763
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0065 Score=45.79 Aligned_cols=146 Identities=8% Similarity=0.075 Sum_probs=80.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|++||+++... ..+..++++++. +.+.-.+++.
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ 142 (260)
T PRK06198 63 ADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNI 142 (260)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 48888888877764 4799999998532 123345555553 3320234553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEec---CCc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG---NGE 119 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~---~g~ 119 (191)
|+....... .....|..+|..++.+.+. .++..+.++||++.......... ........+.. ...
T Consensus 143 ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~ 217 (260)
T PRK06198 143 GSMSAHGGQ----PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQR-EFHGAPDDWLEKAAATQ 217 (260)
T ss_pred CCcccccCC----CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhh-hccCCChHHHHHHhccC
Confidence 432211111 1234577888888777653 36788889999877643211000 00000000000 011
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
....+++.+|+|+++..++.++. ..++.+.+.
T Consensus 218 ~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~ 251 (260)
T PRK06198 218 PFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFD 251 (260)
T ss_pred CccCCcCHHHHHHHHHHHcChhhCCccCceEeEC
Confidence 11345789999999999887653 236777776
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.023 Score=41.10 Aligned_cols=129 Identities=13% Similarity=0.096 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccEEEc-CC-ccc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKRFLP-SE-FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr~v~-s~-~g~ 54 (191)
+|+.|.+++.++++ +.|++||+++... ..+..++++++... + -.+++. |+ .+.
T Consensus 38 ~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~iss~~~~ 116 (199)
T PRK07578 38 VDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-GGSFTLTSGILSD 116 (199)
T ss_pred ecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcccccC
Confidence 48899999888876 6899999998532 12234566665432 1 124443 33 222
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchh
Q 038413 55 EEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEE 128 (191)
Q Consensus 55 ~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 128 (191)
.. . .....|..+|..++.+.+. .|+....++||++..... .. . . .++ + ..++..+
T Consensus 117 ~~-~----~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~-~~-----~--~-~~~--~---~~~~~~~ 177 (199)
T PRK07578 117 EP-I----PGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE-KY-----G--P-FFP--G---FEPVPAA 177 (199)
T ss_pred CC-C----CCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh-hh-----h--h-cCC--C---CCCCCHH
Confidence 11 0 1233567788877766542 477888899997654321 00 0 0 011 1 2357899
Q ss_pred hHHHHHHHHhcCcccCCceeEe
Q 038413 129 DIAKCTIKVINDPRTCNRIVIY 150 (191)
Q Consensus 129 Dva~~~~~~l~~~~~~~~~~~i 150 (191)
|+|+.+..++... ..|+.+.+
T Consensus 178 ~~a~~~~~~~~~~-~~g~~~~~ 198 (199)
T PRK07578 178 RVALAYVRSVEGA-QTGEVYKV 198 (199)
T ss_pred HHHHHHHHHhccc-eeeEEecc
Confidence 9999999998764 23455544
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.007 Score=45.54 Aligned_cols=143 Identities=12% Similarity=0.102 Sum_probs=78.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ .+|++||+++... +.+...+++++ ++.+.-.+++ .
T Consensus 65 ~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ 144 (253)
T PRK05867 65 CDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINT 144 (253)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 58889888877764 6899999998532 12233444443 3332012344 2
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+...... .....|..+|..++.+.+. .|+....++||++.......... .... +......
T Consensus 145 sS~~~~~~~~~---~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~--~~~~----~~~~~~~ 215 (253)
T PRK05867 145 ASMSGHIINVP---QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE--YQPL----WEPKIPL 215 (253)
T ss_pred CcHHhcCCCCC---CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH--HHHH----HHhcCCC
Confidence 33 22211100 1123577889888877653 47888999999876543221100 0000 0000001
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+...+|||+++..++.+.. . -++.+.+.|
T Consensus 216 ~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdg 248 (253)
T PRK05867 216 GRLGRPEELAGLYLYLASEASSYMTGSDIVIDG 248 (253)
T ss_pred CCCcCHHHHHHHHHHHcCcccCCcCCCeEEECC
Confidence 135678999999999887643 2 367777764
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.015 Score=43.83 Aligned_cols=142 Identities=10% Similarity=0.087 Sum_probs=77.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccH----HHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQ----LKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~----~~li~aa~~~g~vkr~v 48 (191)
+|+.|.+++.++++ +.|+|||+++... ..+. ..++..+++.+ ..+++
T Consensus 58 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv 136 (255)
T PRK06057 58 TDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSII 136 (255)
T ss_pred eeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEE
Confidence 48888888887775 4699999987531 0111 23444455555 44555
Q ss_pred -cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCC--CceEEEecC
Q 038413 49 -PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEP--HDDVVVYGN 117 (191)
Q Consensus 49 -~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~--~~~~~~~~~ 117 (191)
.|+ .+..... .+...|..+|...+.+.+ ..|+..+.++||++.............+ ...+...+.
T Consensus 137 ~~sS~~~~~g~~----~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
T PRK06057 137 NTASFVAVMGSA----TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPM 212 (255)
T ss_pred EEcchhhccCCC----CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCC
Confidence 343 2221100 122346677865554433 2489999999998876543221110000 000000111
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
..+.+.+|+|+++..++.+.. . .++.+.+.
T Consensus 213 ----~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~ 244 (255)
T PRK06057 213 ----GRFAEPEEIAAAVAFLASDDASFITASTFLVD 244 (255)
T ss_pred ----CCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 146789999999888777643 2 25666665
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.018 Score=42.97 Aligned_cols=121 Identities=13% Similarity=0.042 Sum_probs=74.3
Q ss_pred CCCCCHHHHHHhhcc----CcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccEEE-cCCccc
Q 038413 1 GELDEHEKIVSILKE----VDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKRFL-PSEFGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~g----~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr~v-~s~~g~ 54 (191)
+|++|.+++.++++. .|.++++++... ..+..++++++... + -.+++ .|+...
T Consensus 53 ~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~isS~~~ 131 (240)
T PRK06101 53 FDVTDHPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-GHRVVIVGSIAS 131 (240)
T ss_pred eeCCCHHHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCeEEEEechhh
Confidence 589999999988865 478888776321 12356677776642 2 23444 343221
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecch
Q 038413 55 EEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 55 ~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
.... .....|..+|..++.+.+ ..|+.++.++||+..+...... . ... ...+..
T Consensus 132 ~~~~----~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~--------~------~~~-~~~~~~ 192 (240)
T PRK06101 132 ELAL----PRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN--------T------FAM-PMIITV 192 (240)
T ss_pred ccCC----CCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC--------C------CCC-CcccCH
Confidence 1111 123357788988887754 3589999999998765421110 0 000 123689
Q ss_pred hhHHHHHHHHhcCc
Q 038413 128 EDIAKCTIKVINDP 141 (191)
Q Consensus 128 ~Dva~~~~~~l~~~ 141 (191)
+|+|+.++..++..
T Consensus 193 ~~~a~~i~~~i~~~ 206 (240)
T PRK06101 193 EQASQEIRAQLARG 206 (240)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999874
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0053 Score=45.93 Aligned_cols=83 Identities=12% Similarity=0.073 Sum_probs=49.5
Q ss_pred chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKV 137 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 137 (191)
...|..+|..++.+++. .+++.+.++||.+........ .+. .............+.+.+|+|+++..+
T Consensus 160 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~a~~~~~l 234 (253)
T PRK08217 160 QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM-KPE----ALERLEKMIPVGRLGEPEEIAHTVRFI 234 (253)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc-CHH----HHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence 34577888888766542 479999999998765432111 000 000000111112356889999999998
Q ss_pred hcCcccCCceeEeec
Q 038413 138 INDPRTCNRIVIYRP 152 (191)
Q Consensus 138 l~~~~~~~~~~~i~~ 152 (191)
+......++.++++|
T Consensus 235 ~~~~~~~g~~~~~~g 249 (253)
T PRK08217 235 IENDYVTGRVLEIDG 249 (253)
T ss_pred HcCCCcCCcEEEeCC
Confidence 876433467888874
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0088 Score=45.19 Aligned_cols=147 Identities=10% Similarity=0.115 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|+|||+++... +.+..++++++. +.+ ..+++.
T Consensus 61 ~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~i 139 (263)
T PRK08226 61 ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMM 139 (263)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58899888887765 4699999998532 122344445443 444 456663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc---CCCCCCceEEEecCC
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL---RPFEPHDDVVVYGNG 118 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~---~~~~~~~~~~~~~~g 118 (191)
|+ .+..... .....|..+|...+.+.+. .++..+.++||........... .+............+
T Consensus 140 sS~~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (263)
T PRK08226 140 SSVTGDMVAD----PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKA 215 (263)
T ss_pred CcHHhcccCC----CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhcc
Confidence 33 2211110 1133567788887766653 3788889999987664322211 000000000000001
Q ss_pred cceeeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
.....+...+|+|+++..++... .. .++.+.+.|
T Consensus 216 ~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dg 251 (263)
T PRK08226 216 IPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDG 251 (263)
T ss_pred CCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECC
Confidence 00113467899999888887653 22 356667764
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.013 Score=43.48 Aligned_cols=140 Identities=9% Similarity=0.049 Sum_probs=76.3
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccEEE-cCC-ccc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKRFL-PSE-FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr~v-~s~-~g~ 54 (191)
+|+.|.+++.++++ ..|++||+++... ..+...++.++.+. . ..++| .|+ .+.
T Consensus 58 ~D~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~isS~~~~ 136 (237)
T PRK12742 58 TDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-GGRIIIIGSVNGD 136 (237)
T ss_pred cCCCCHHHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-CCeEEEEeccccc
Confidence 47888888877764 4799999998632 01122333333322 2 23555 333 221
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecch
Q 038413 55 EEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 55 ~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
... ..+...|..+|..++.+++. .|+..+.++||++.....+... . .. .. .........+.+.
T Consensus 137 ~~~----~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~-~-~~-~~---~~~~~~~~~~~~p 206 (237)
T PRK12742 137 RMP----VAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG-P-MK-DM---MHSFMAIKRHGRP 206 (237)
T ss_pred cCC----CCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc-H-HH-HH---HHhcCCCCCCCCH
Confidence 111 12344677889888877653 4789999999987654322100 0 00 00 0000001124678
Q ss_pred hhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 128 EDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
+|+|+++..++.+.. . .+..+.+.
T Consensus 207 ~~~a~~~~~l~s~~~~~~~G~~~~~d 232 (237)
T PRK12742 207 EEVAGMVAWLAGPEASFVTGAMHTID 232 (237)
T ss_pred HHHHHHHHHHcCcccCcccCCEEEeC
Confidence 999999988887643 2 25556665
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.012 Score=50.52 Aligned_cols=121 Identities=15% Similarity=0.267 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------ccc----HHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLD----QLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~----~~~li~aa~~~g~vkr~v 48 (191)
+|+.|.+++.++++ +.|++||+++... ..+ ...++..+++.+ ..++|
T Consensus 427 ~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv 505 (657)
T PRK07201 427 CDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVV 505 (657)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEE
Confidence 58899998888775 5899999998531 011 233445556666 66776
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
. |+.+..... .....|..+|..++.+.+. .|+.++.++||++........ .. . .
T Consensus 506 ~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~-------~~---~----~ 567 (657)
T PRK07201 506 NVSSIGVQTNA----PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT-------KR---Y----N 567 (657)
T ss_pred EECChhhcCCC----CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc-------cc---c----c
Confidence 3 443221111 1134577889888777643 489999999998765421110 00 0 1
Q ss_pred eeeecchhhHHHHHHHHhcC
Q 038413 121 KAVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~ 140 (191)
.....+.+++|+.++..+..
T Consensus 568 ~~~~~~~~~~a~~i~~~~~~ 587 (657)
T PRK07201 568 NVPTISPEEAADMVVRAIVE 587 (657)
T ss_pred CCCCCCHHHHHHHHHHHHHh
Confidence 12357899999999998764
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.016 Score=44.00 Aligned_cols=144 Identities=11% Similarity=0.013 Sum_probs=79.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc---CCccEEE-cC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA---GNIKRFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~---g~vkr~v-~s 50 (191)
+|++|.+++.++++ ++|+|||+++... ..+..++++++... . -.+++ .|
T Consensus 65 ~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~is 143 (264)
T PRK07576 65 ADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQIS 143 (264)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEEC
Confidence 48889888887765 3699999986421 23345566655432 1 13554 34
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccc-cccccccCCCCCCceEEEecCCccee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGA-YFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
+....... .....|..+|..++.+++. .++..+.++||.+.+ ........ ...............
T Consensus 144 s~~~~~~~----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~---~~~~~~~~~~~~~~~ 216 (264)
T PRK07576 144 APQAFVPM----PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAP---SPELQAAVAQSVPLK 216 (264)
T ss_pred ChhhccCC----CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhccc---CHHHHHHHHhcCCCC
Confidence 32111110 1133566789888877653 467888899997653 21111110 000000000001112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+...+|+|++++.++.++. ..++.+.+.|
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~g 248 (264)
T PRK07576 217 RNGTKQDIANAALFLASDMASYITGVVLPVDG 248 (264)
T ss_pred CCCCHHHHHHHHHHHcChhhcCccCCEEEECC
Confidence 35678999999999998643 2366677764
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.013 Score=43.37 Aligned_cols=143 Identities=11% Similarity=0.043 Sum_probs=75.3
Q ss_pred CCCCCH-HHHHHhhccCcEEEEccCCCC--------------------cccHHHHHHHHH----HcCCccEEEc-CC-cc
Q 038413 1 GELDEH-EKIVSILKEVDVVISTVAYPQ--------------------FLDQLKIVHAIK----VAGNIKRFLP-SE-FG 53 (191)
Q Consensus 1 gD~~d~-~~l~~a~~g~d~V~~~~~~~~--------------------~~~~~~li~aa~----~~g~vkr~v~-s~-~g 53 (191)
+|+.|. +.+.+.+..+|++||+++... ..+..++++++. +.+ -.+++. |+ .+
T Consensus 52 ~D~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~ 130 (235)
T PRK06550 52 LDLSDDLEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIAS 130 (235)
T ss_pred CChHHHHHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhh
Confidence 366665 444444557899999998421 122344455443 344 346653 33 22
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
.. .. .....|..+|..++.+.+. .|+..+.++||++.......... ................+..
T Consensus 131 ~~-~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 202 (235)
T PRK06550 131 FV-AG----GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE---PGGLADWVARETPIKRWAE 202 (235)
T ss_pred cc-CC----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC---chHHHHHHhccCCcCCCCC
Confidence 21 11 1123466788777665542 48899999999876543211000 0000000000111123567
Q ss_pred hhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 127 EEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+|+|+++..++.++. ..++.+.+.+
T Consensus 203 ~~~~a~~~~~l~s~~~~~~~g~~~~~~g 230 (235)
T PRK06550 203 PEEVAELTLFLASGKADYMQGTIVPIDG 230 (235)
T ss_pred HHHHHHHHHHHcChhhccCCCcEEEECC
Confidence 8999999999987642 2356666663
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.031 Score=42.69 Aligned_cols=134 Identities=15% Similarity=0.151 Sum_probs=76.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v-~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++.. .+ -.+++ .
T Consensus 69 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~i 147 (273)
T PRK08278 69 GDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTL 147 (273)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58889988887765 5799999998631 2334556666643 32 22444 2
Q ss_pred CCc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccc-cccccccCCCCCCceEEEecCCcc
Q 038413 50 SEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGA-YFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+. +... . ...+...|..+|..++.+++. .++..+.+.|+.+.. ....... +....
T Consensus 148 ss~~~~~~-~--~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~------------~~~~~ 212 (273)
T PRK08278 148 SPPLNLDP-K--WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLL------------GGDEA 212 (273)
T ss_pred CCchhccc-c--ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcc------------ccccc
Confidence 332 2111 0 002234677899999887763 478888899984332 2111110 00111
Q ss_pred eeeecchhhHHHHHHHHhcCcc-cCCceeEe
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-TCNRIVIY 150 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i 150 (191)
...+...+|+|+.++.++..+. ..+..+.+
T Consensus 213 ~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~ 243 (273)
T PRK08278 213 MRRSRTPEIMADAAYEILSRPAREFTGNFLI 243 (273)
T ss_pred ccccCCHHHHHHHHHHHhcCccccceeEEEe
Confidence 1235678999999999988753 33443444
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0084 Score=45.34 Aligned_cols=144 Identities=13% Similarity=0.049 Sum_probs=78.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC---------C-----cc---------------cHHHHHHHHHHcCCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP---------Q-----FL---------------DQLKIVHAIKVAGNI 44 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~---------~-----~~---------------~~~~li~aa~~~g~v 44 (191)
+|++|.+++.++++ ..|+++|+++.. . .+ ..+.++..+++.+ -
T Consensus 66 ~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 144 (260)
T PRK08416 66 LNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-G 144 (260)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-C
Confidence 48889888877664 479999998631 1 00 1233444455544 4
Q ss_pred cEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEec
Q 038413 45 KRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG 116 (191)
Q Consensus 45 kr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (191)
.++|. |+.+..... .....|..+|..++.+.+. .|+....++||++.......+... .. ......
T Consensus 145 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~--~~-~~~~~~ 217 (260)
T PRK08416 145 GSIISLSSTGNLVYI----ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY--EE-VKAKTE 217 (260)
T ss_pred EEEEEEeccccccCC----CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC--HH-HHHHHH
Confidence 46653 442211110 1123467788888777653 478889999998765432211100 00 000000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
......-+...+|+|.+++.++.++ .. -++.+.+.+
T Consensus 218 ~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdg 255 (260)
T PRK08416 218 ELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDG 255 (260)
T ss_pred hcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcC
Confidence 0000012567899999999988764 22 356666653
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.015 Score=44.02 Aligned_cols=144 Identities=12% Similarity=0.102 Sum_probs=77.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cc----cHHHHHHHHHHcCCc-cEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FL----DQLKIVHAIKVAGNI-KRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~----~~~~li~aa~~~g~v-kr~v- 48 (191)
+|+.|.+++.++++ ..|++||+++... +. ....++..+++.+ . .++|
T Consensus 64 ~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~ 142 (261)
T PRK08936 64 GDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIIN 142 (261)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEE
Confidence 48888888777664 4799999998632 00 1233455666654 3 3555
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
.|+...... ..+...|..+|.+.+.+.+. .|+..+.++||+........... ..............
T Consensus 143 ~sS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~ 215 (261)
T PRK08936 143 MSSVHEQIP----WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFA---DPKQRADVESMIPM 215 (261)
T ss_pred EccccccCC----CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccC---CHHHHHHHHhcCCC
Confidence 343221111 11233567788766655442 47889999999876543211000 00000000000011
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+...+|+|+.+..++.++. . .+..+.+.+
T Consensus 216 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~ 248 (261)
T PRK08936 216 GYIGKPEEIAAVAAWLASSEASYVTGITLFADG 248 (261)
T ss_pred CCCcCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence 235678999999999887642 2 345566653
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.026 Score=42.47 Aligned_cols=144 Identities=11% Similarity=0.127 Sum_probs=78.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHH----HHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKI----VHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~l----i~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|+++|+++... +.+...+ +..+++.+.-.++|.
T Consensus 62 ~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~i 141 (251)
T PRK12481 62 ADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINI 141 (251)
T ss_pred eCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEe
Confidence 48899988887764 4799999998532 1122333 334444330135552
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+... . .....|..+|..++.+.+ ..|+....++||++...............+. +. .....
T Consensus 142 sS~~~~~~-~----~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~--~~-~~~p~ 213 (251)
T PRK12481 142 ASMLSFQG-G----IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEA--IL-ERIPA 213 (251)
T ss_pred CChhhcCC-C----CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHH--HH-hcCCC
Confidence 33 22211 1 112357788888877654 2588899999998765432211000000000 00 00000
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+...+|+|+++..++.+.. -.++.+.+.|
T Consensus 214 ~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdg 246 (251)
T PRK12481 214 SRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDG 246 (251)
T ss_pred CCCcCHHHHHHHHHHHhCccccCcCCceEEECC
Confidence 124678999999999887642 2356777763
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.027 Score=42.92 Aligned_cols=136 Identities=12% Similarity=0.126 Sum_probs=72.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH---cCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV---AGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~---~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++.. .+ ..+++. |
T Consensus 51 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~is 129 (274)
T PRK05693 51 LDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIG 129 (274)
T ss_pred eeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEEC
Confidence 48888888877653 5799999998532 1123344444421 22 235543 3
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCC--CCCCceEEEecCCc-
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRP--FEPHDDVVVYGNGE- 119 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~--~~~~~~~~~~~~g~- 119 (191)
+ .+.... .....|..+|..++.+.+ ..|+..+.++||.+...+....... ........++...+
T Consensus 130 S~~~~~~~-----~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (274)
T PRK05693 130 SVSGVLVT-----PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREH 204 (274)
T ss_pred CccccCCC-----CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHH
Confidence 3 332110 123457778887776543 2589999999998866543221110 00000001100000
Q ss_pred -------ceeeecchhhHHHHHHHHhcCcc
Q 038413 120 -------AKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 120 -------~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
........+|+|+.++.++..+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~ 234 (274)
T PRK05693 205 IQARARASQDNPTPAAEFARQLLAAVQQSP 234 (274)
T ss_pred HHHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence 00123578999999999988654
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.025 Score=43.07 Aligned_cols=146 Identities=12% Similarity=0.092 Sum_probs=78.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC----c----------------cc----HHHHHHHHHHcCCccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ----F----------------LD----QLKIVHAIKVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~----~----------------~~----~~~li~aa~~~g~vkr~v- 48 (191)
+|+.|.+++.++++ ..|++||+++... . .+ .+.++..+++.+ .++|
T Consensus 61 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~ 138 (272)
T PRK08589 61 VDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIIN 138 (272)
T ss_pred eecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEE
Confidence 48888888776664 4799999998531 0 01 123445555554 3554
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCC--CceEE-EecCC
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEP--HDDVV-VYGNG 118 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~--~~~~~-~~~~g 118 (191)
.|+....... .....|..+|..++.+.+. .|+..+.+.||.+.............. ...+. .....
T Consensus 139 isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (272)
T PRK08589 139 TSSFSGQAAD----LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWM 214 (272)
T ss_pred eCchhhcCCC----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhcc
Confidence 3442211111 1133577888888777653 478889999998765432211100000 00000 00000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.....+...+|+|+++..++.++. . .++.+.+.+
T Consensus 215 ~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdg 250 (272)
T PRK08589 215 TPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDG 250 (272)
T ss_pred CCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECC
Confidence 000124678999999999887642 2 366777764
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.013 Score=40.85 Aligned_cols=90 Identities=11% Similarity=0.130 Sum_probs=57.9
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v~-s~~g 53 (191)
+|+.+.+.+.+++.. .|.++|+++... +.+..++++++++.+ .++++. |+.+
T Consensus 60 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~ 138 (180)
T smart00822 60 CDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVA 138 (180)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHH
Confidence 478888877776543 599999997431 234677888888777 777664 4332
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHH---hcCCCeEEEeccccc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIE---AVEIPYTFVSANCYG 95 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~~~~~tilrp~~~~ 95 (191)
..... .....|..+|..++.+++ ..+++.+.+.||++.
T Consensus 139 ~~~~~----~~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 139 GVLGN----PGQANYAAANAFLDALAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred HhcCC----CCchhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence 21111 112346667877776654 358888888888653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.032 Score=42.65 Aligned_cols=150 Identities=11% Similarity=0.022 Sum_probs=79.0
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC------------cccHHHHHHHHH----HcCCccEEEcCCcccCCCC
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ------------FLDQLKIVHAIK----VAGNIKRFLPSEFGCEEDR 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~------------~~~~~~li~aa~----~~g~vkr~v~s~~g~~~~~ 58 (191)
+|+.|.+++.++++ +.|++||+++... ..+..++++++. +.| ..-++.|..+.....
T Consensus 56 ~Dv~d~~~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g-~iv~isS~~~~~~~~ 134 (275)
T PRK06940 56 VDVSSRESVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGG-AGVVIASQSGHRLPA 134 (275)
T ss_pred eecCCHHHHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCC-CEEEEEecccccCcc
Confidence 48899888887764 4899999998642 233344455443 334 223334433321110
Q ss_pred --------------CC---C----C----CCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCC
Q 038413 59 --------------VR---P----L----PPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPF 106 (191)
Q Consensus 59 --------------~~---~----~----~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~ 106 (191)
.. . . .+...|..+|...+...+. .|+....+.||+........... .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~-~ 213 (275)
T PRK06940 135 LTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELN-G 213 (275)
T ss_pred cchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhc-C
Confidence 00 0 0 1123467788887655432 57888999999876543211110 0
Q ss_pred CCCceEEEecCCcceeeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 107 EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
................-+...+|+|+++..++.+. .. -++.+.+.|
T Consensus 214 ~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdg 261 (275)
T PRK06940 214 PRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDG 261 (275)
T ss_pred CchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcC
Confidence 00000000000000112567899999999888753 32 356677764
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.04 Score=41.39 Aligned_cols=143 Identities=10% Similarity=0.089 Sum_probs=76.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCC-------
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGN------- 43 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~------- 43 (191)
+|+.+.+++.++++ ..|++||+++... +.+..++++++. +...
T Consensus 65 ~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (258)
T PRK06949 65 LDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKP 144 (258)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCC
Confidence 47888888877765 4799999998421 122334444333 2220
Q ss_pred ccEEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEe
Q 038413 44 IKRFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY 115 (191)
Q Consensus 44 vkr~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~ 115 (191)
..+++ .|+.+.... ..+..+|..+|...+.+++. .++.+++++||.+.......... ....-.+.
T Consensus 145 ~g~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~ 217 (258)
T PRK06949 145 GGRIINIASVAGLRV----LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE---TEQGQKLV 217 (258)
T ss_pred CeEEEEECcccccCC----CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC---hHHHHHHH
Confidence 12444 233221111 11234566788777766543 47899999999887643221100 00000000
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
.. .....+...+|+++++..++.++. . .++.+.+.
T Consensus 218 ~~-~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~d 254 (258)
T PRK06949 218 SM-LPRKRVGKPEDLDGLLLLLAADESQFINGAIISAD 254 (258)
T ss_pred hc-CCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeC
Confidence 00 001234567999999999887542 2 35555665
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.046 Score=41.34 Aligned_cols=125 Identities=14% Similarity=0.257 Sum_probs=70.5
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ ..|+|||+++... ..+..++++++. +.+ ..+++. |
T Consensus 60 ~D~~d~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~is 138 (263)
T PRK09072 60 ADLTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVG 138 (263)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEec
Confidence 48888888776654 4799999988632 123344445443 343 345543 3
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
+ .+.. .. .....|..+|..++.+++. .++.++.+.||++......... . . . ......
T Consensus 139 S~~~~~-~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~-----~-~--~--~~~~~~ 203 (263)
T PRK09072 139 STFGSI-GY----PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV-----Q-A--L--NRALGN 203 (263)
T ss_pred ChhhCc-CC----CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc-----c-c--c--cccccC
Confidence 3 2221 11 1123466788877665542 4688888999876543211100 0 0 0 000012
Q ss_pred eecchhhHHHHHHHHhcCc
Q 038413 123 VFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~ 141 (191)
.+.+.+|+|+.++.++.+.
T Consensus 204 ~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 204 AMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred CCCCHHHHHHHHHHHHhCC
Confidence 3567899999999999875
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.029 Score=47.22 Aligned_cols=137 Identities=10% Similarity=0.052 Sum_probs=73.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCc-cEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNI-KRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~v-kr~v~ 49 (191)
+|++|.+++.++++ ..|++||+++... +.+..++.++ +++.+ - .++|.
T Consensus 371 ~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~ 449 (582)
T PRK05855 371 VDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG-TGGHIVN 449 (582)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEE
Confidence 58999998887765 3799999998632 1222333333 44443 2 35553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCC---ceEEEecCC
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPH---DDVVVYGNG 118 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~---~~~~~~~~g 118 (191)
||....... .+...|..+|..++.+.+. .|+..+.++||.+............... ......-..
T Consensus 450 ~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (582)
T PRK05855 450 VASAAAYAPS----RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADK 525 (582)
T ss_pred ECChhhccCC----CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhh
Confidence 442211111 1234677889887766542 5899999999987664322211000000 000000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
.........+|+|+.++.++..+.
T Consensus 526 ~~~~~~~~p~~va~~~~~~~~~~~ 549 (582)
T PRK05855 526 LYQRRGYGPEKVAKAIVDAVKRNK 549 (582)
T ss_pred hccccCCCHHHHHHHHHHHHHcCC
Confidence 000112467999999999998753
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.18 Score=39.21 Aligned_cols=156 Identities=9% Similarity=0.052 Sum_probs=84.5
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----c----C-C-cc
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----A----G-N-IK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~----g-~-vk 45 (191)
+|+.|.+++.++++ .+|++||+++... +.+..++++++.. . + . -.
T Consensus 69 ~Dv~d~~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g 148 (306)
T PRK07792 69 GDISQRATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYG 148 (306)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCc
Confidence 58888888877664 4799999998632 1234455555431 1 0 0 02
Q ss_pred EEEc-CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEec
Q 038413 46 RFLP-SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG 116 (191)
Q Consensus 46 r~v~-s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (191)
++|. |+ .+... . .....|..+|..++.+.+. .|+....+.|+. ......... .. .....
T Consensus 149 ~iv~isS~~~~~~-~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~----~~-~~~~~- 216 (306)
T PRK07792 149 RIVNTSSEAGLVG-P----VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVF----GD-APDVE- 216 (306)
T ss_pred EEEEECCcccccC-C----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhc----cc-cchhh-
Confidence 5542 33 22211 0 1123577888888766542 478888888873 211111100 00 00000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecC-----------------CCccCHHHHHHHHHHHh
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQ-----------------TNIISQLELISLWEQKT 170 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~-----------------~~~~t~~e~~~~~~~~~ 170 (191)
.....+...+|+|.++..++.... .-++.+.+.|+ ++..|..|+.+.+.+.+
T Consensus 217 --~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (306)
T PRK07792 217 --AGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF 287 (306)
T ss_pred --hhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence 011334578999999888776532 22455555421 14578888888888874
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.043 Score=41.31 Aligned_cols=143 Identities=9% Similarity=0.111 Sum_probs=77.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ ..|++||+++... ..+..++++++ ++.+.-.+++ .
T Consensus 64 ~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~i 143 (253)
T PRK08993 64 ADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINI 143 (253)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 48889888887765 4799999998632 12233444443 3332012444 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+... . .....|..+|..++.+.+. .|+....++||++.......+......... +...-. .
T Consensus 144 sS~~~~~~-~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~--~~~~~p-~ 215 (253)
T PRK08993 144 ASMLSFQG-G----IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAE--ILDRIP-A 215 (253)
T ss_pred CchhhccC-C----CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHH--HHhcCC-C
Confidence 33 22211 0 1123566788887766542 478889999998876432211100000000 000000 0
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
.-+...+|+|+.+..++.+.. . .++.+.+.
T Consensus 216 ~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~d 247 (253)
T PRK08993 216 GRWGLPSDLMGPVVFLASSASDYINGYTIAVD 247 (253)
T ss_pred CCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 125568999999999988653 2 35666665
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.031 Score=46.68 Aligned_cols=145 Identities=12% Similarity=0.084 Sum_probs=79.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHc--CCccEEE-cC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVA--GNIKRFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~--g~vkr~v-~s 50 (191)
+|+.|.+++.++++ ..|++||+++... +.+..++++++... + -.++| .|
T Consensus 322 ~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~g~iv~is 400 (520)
T PRK06484 322 ADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ-GGVIVNLG 400 (520)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc-CCEEEEEC
Confidence 58899888877764 3799999998531 12334445554432 1 13555 34
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+....... .+...|..+|..++.+.+. .|+....++||++........... ................
T Consensus 401 S~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~ 474 (520)
T PRK06484 401 SIASLLAL----PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS--GRADFDSIRRRIPLGR 474 (520)
T ss_pred chhhcCCC----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc--cHHHHHHHHhcCCCCC
Confidence 42211111 1234577889888766553 478899999998766432211100 0000000000000012
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+...+|+|++++.++..+. --++.+.+.+
T Consensus 475 ~~~~~dia~~~~~l~s~~~~~~~G~~i~vdg 505 (520)
T PRK06484 475 LGDPEEVAEAIAFLASPAASYVNGATLTVDG 505 (520)
T ss_pred CcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 4678999999999887542 2367777764
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.045 Score=44.96 Aligned_cols=140 Identities=15% Similarity=0.135 Sum_probs=77.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCc----cEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNI----KRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~v----kr~v-~ 49 (191)
+|++|.+++.++++ +.|+|||+++... ..+..++.+++.... . .++| .
T Consensus 263 ~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~-~~~~~g~iv~~ 341 (450)
T PRK08261 263 LDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAG-ALGDGGRIVGV 341 (450)
T ss_pred EeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhh-hhcCCCEEEEE
Confidence 37888888776654 5799999998532 234566667766533 2 4555 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccC-CCCCCceEEEecCCcc
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLR-PFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~ 120 (191)
|+ .+.... .....|..+|..++.+++ ..|+....+.||.+.......... .......+. .
T Consensus 342 SS~~~~~g~-----~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~------~ 410 (450)
T PRK08261 342 SSISGIAGN-----RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMN------S 410 (450)
T ss_pred CChhhcCCC-----CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcC------C
Confidence 43 222111 113356778876665543 357888999999765422111100 000000000 0
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.......+|+|+++..++.... . -++.+.++|
T Consensus 411 l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g 444 (450)
T PRK08261 411 LQQGGLPVDVAETIAWLASPASGGVTGNVVRVCG 444 (450)
T ss_pred cCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence 0112346799999998876532 2 267777774
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.091 Score=39.59 Aligned_cols=147 Identities=10% Similarity=-0.007 Sum_probs=77.7
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~-s~~g 53 (191)
+|+.|.+++.++++ ..|++||+++... +.+ .+.++..+++.+ -.+++. |+..
T Consensus 64 ~D~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~ 142 (259)
T PRK06125 64 LDLSSPEAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAA 142 (259)
T ss_pred ecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCcc
Confidence 48889888887764 5899999988531 111 233444445554 335553 3321
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC----CCCCCc-eEEEecCCcce
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR----PFEPHD-DVVVYGNGEAK 121 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~----~~~~~~-~~~~~~~g~~~ 121 (191)
..... .....|..+|..++.+.+. .|+.+..+.||++.......... ...... .....-.....
T Consensus 143 ~~~~~----~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (259)
T PRK06125 143 GENPD----ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPL 218 (259)
T ss_pred ccCCC----CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCc
Confidence 11110 1123455677777665543 47889999999887653221110 000000 00000000000
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+...+|+|+++..++.+.. . .++.+.+.|
T Consensus 219 ~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdg 251 (259)
T PRK06125 219 GRPATPEEVADLVAFLASPRSGYTSGTVVTVDG 251 (259)
T ss_pred CCCcCHHHHHHHHHHHcCchhccccCceEEecC
Confidence 124678999999998887542 2 356666764
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.05 Score=41.10 Aligned_cols=142 Identities=11% Similarity=0.106 Sum_probs=76.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... +.+...++++ +++.+.-.+++.
T Consensus 76 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ 155 (262)
T PRK07831 76 CDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNN 155 (262)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 48888888877664 4699999998531 1122223333 333320124443
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
++ .+.... .+...|..+|...+.+.+. .|+....++||.+...+...... .............
T Consensus 156 ss~~~~~~~-----~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~----~~~~~~~~~~~~~ 226 (262)
T PRK07831 156 ASVLGWRAQ-----HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS----AELLDELAAREAF 226 (262)
T ss_pred CchhhcCCC-----CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC----HHHHHHHHhcCCC
Confidence 22 222111 1233577889888877653 47888999999876643221100 0000000000001
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
.-+...+|+|+++..++.+.. . -|+.+.+.
T Consensus 227 ~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~ 258 (262)
T PRK07831 227 GRAAEPWEVANVIAFLASDYSSYLTGEVVSVS 258 (262)
T ss_pred CCCcCHHHHHHHHHHHcCchhcCcCCceEEeC
Confidence 124568999999999887643 2 25666554
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.037 Score=41.07 Aligned_cols=140 Identities=7% Similarity=0.053 Sum_probs=75.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH-----HHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI-----KVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa-----~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ..|+++|+++... ..+..++++++ ++.+ ..++|.
T Consensus 55 ~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~ 133 (239)
T TIGR01831 55 FDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIIT 133 (239)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEE
Confidence 58888888777654 3699999887431 12334555654 2234 456553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+....... .....|..+|...+.+.+ ..|+..+.++||++.......... .........+ .
T Consensus 134 vsS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~----~ 203 (239)
T TIGR01831 134 LASVSGVMGN----RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEH--DLDEALKTVP----M 203 (239)
T ss_pred EcchhhccCC----CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhH--HHHHHHhcCC----C
Confidence 432111111 112346667776654443 257889999999876543221110 0000000000 0
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
..+...+|+|+++..++.++. . .+..+.+.
T Consensus 204 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 235 (239)
T TIGR01831 204 NRMGQPAEVASLAGFLMSDGASYVTRQVISVN 235 (239)
T ss_pred CCCCCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence 124568999999999988653 2 24555554
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.058 Score=40.69 Aligned_cols=138 Identities=9% Similarity=0.082 Sum_probs=76.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.+++. ..|++||+++... ..+ ...++..+++.+ -.++|.
T Consensus 75 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i 153 (256)
T PRK12859 75 LDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINM 153 (256)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEE
Confidence 48889888887764 3699999997532 111 233455555544 346664
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++...+. .++..+.++||++......... ........+ ..
T Consensus 154 sS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~----~~~~~~~~~----~~ 221 (256)
T PRK12859 154 TSGQFQGP----MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEI----KQGLLPMFP----FG 221 (256)
T ss_pred cccccCCC----CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHH----HHHHHhcCC----CC
Confidence 43221110 11234577788888766442 5788899999987653211100 000000000 11
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
.+...+|+|+++..++.... . -++.+.+.
T Consensus 222 ~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d 252 (256)
T PRK12859 222 RIGEPKDAARLIKFLASEEAEWITGQIIHSE 252 (256)
T ss_pred CCcCHHHHHHHHHHHhCccccCccCcEEEeC
Confidence 23568999999988887643 2 25656655
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.13 Score=38.92 Aligned_cols=142 Identities=8% Similarity=0.088 Sum_probs=76.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC-------C----------------ccc----HHHHHHHHHHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP-------Q----------------FLD----QLKIVHAIKVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~-------~----------------~~~----~~~li~aa~~~g~vkr 46 (191)
+|+.|.+++.++++ ..|+++|+++.. . ..+ .+.++..+++.| +
T Consensus 66 ~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g---~ 142 (258)
T PRK07370 66 CDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGG---S 142 (258)
T ss_pred cCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCC---e
Confidence 48889888877653 479999999853 1 011 233444444433 4
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+.+..... .....|..+|..++.+.+. .|+....+.||++.......+... .. ........
T Consensus 143 Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~--~~-~~~~~~~~ 215 (258)
T PRK07370 143 IVTLTYLGGVRAI----PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI--LD-MIHHVEEK 215 (258)
T ss_pred EEEEeccccccCC----cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc--hh-hhhhhhhc
Confidence 44 3432211110 1133567889888777553 478888999998765422111000 00 00000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
....-+...+|+|.++..++.++. .. ++.+.+.|
T Consensus 216 ~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdg 251 (258)
T PRK07370 216 APLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDA 251 (258)
T ss_pred CCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECC
Confidence 001124567999999999887643 22 56677763
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.068 Score=39.39 Aligned_cols=93 Identities=9% Similarity=0.141 Sum_probs=54.4
Q ss_pred CCCCCHHHHHHhhc-----cCcEEEEccCCCC---------------------cccHHHHHHHHHHc---CCccEEE--c
Q 038413 1 GELDEHEKIVSILK-----EVDVVISTVAYPQ---------------------FLDQLKIVHAIKVA---GNIKRFL--P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-----g~d~V~~~~~~~~---------------------~~~~~~li~aa~~~---g~vkr~v--~ 49 (191)
+|+.|.+++.++++ +.|+|||+++... ..+..++.+++... + ..+++ .
T Consensus 52 ~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~s 130 (225)
T PRK08177 52 LDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMS 130 (225)
T ss_pred cCCCCHHHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEc
Confidence 48888888777665 5899999987531 12334555555421 2 23443 2
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGA 96 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~ 96 (191)
|.+|....... .+...|..+|..++.+++. .++..+.++||++..
T Consensus 131 s~~g~~~~~~~--~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t 182 (225)
T PRK08177 131 SQLGSVELPDG--GEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKT 182 (225)
T ss_pred cCccccccCCC--CCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceec
Confidence 33443211110 1233467889888877653 357788889997654
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.12 Score=38.97 Aligned_cols=114 Identities=12% Similarity=0.076 Sum_probs=66.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------cccHHHHHHHHH----Hc----CCccEEEcCCcccCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------FLDQLKIVHAIK----VA----GNIKRFLPSEFGCEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------~~~~~~li~aa~----~~----g~vkr~v~s~~g~~~ 56 (191)
+|+.|.+++.+.+.+.|++||+++... +.+..++++++. +. | ...++.|+.+...
T Consensus 65 ~D~~~~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g-~~iiv~ss~a~~~ 143 (245)
T PRK12367 65 WECGKEESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIP-KEIWVNTSEAEIQ 143 (245)
T ss_pred eeCCCHHHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCC-eEEEEEecccccC
Confidence 488899999888889999999998531 222344444433 31 2 2233433322111
Q ss_pred CCCCCCCCchhhHHHHHHHHHHH----------HhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecc
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAI----------EAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l----------~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
. .....|..+|..++... ...++..+.+.||++.... . +...++
T Consensus 144 ~-----~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~---------~------------~~~~~~ 197 (245)
T PRK12367 144 P-----ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL---------N------------PIGIMS 197 (245)
T ss_pred C-----CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc---------C------------ccCCCC
Confidence 0 11234778888764221 1246667777777643221 0 012467
Q ss_pred hhhHHHHHHHHhcCc
Q 038413 127 EEDIAKCTIKVINDP 141 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~ 141 (191)
.+|+|+.++.++.+.
T Consensus 198 ~~~vA~~i~~~~~~~ 212 (245)
T PRK12367 198 ADFVAKQILDQANLG 212 (245)
T ss_pred HHHHHHHHHHHHhcC
Confidence 899999999998765
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.094 Score=39.73 Aligned_cols=143 Identities=10% Similarity=0.075 Sum_probs=75.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------cc----------------cHHHHHHH----HHHcCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------FL----------------DQLKIVHA----IKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------~~----------------~~~~li~a----a~~~g~vk 45 (191)
+|+.|.+++.++++ +.|++||+++... .+ +...+.++ +++.+ .
T Consensus 63 ~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~--g 140 (261)
T PRK08690 63 CDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN--S 140 (261)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC--c
Confidence 58899888877753 5799999997531 00 01122222 22221 2
Q ss_pred EEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 46 RFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 46 r~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
++| .|+.+..... .....|..+|...+.+.+ ..|+....+.||++.......... ..........
T Consensus 141 ~Iv~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~---~~~~~~~~~~ 213 (261)
T PRK08690 141 AIVALSYLGAVRAI----PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIAD---FGKLLGHVAA 213 (261)
T ss_pred EEEEEcccccccCC----CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCc---hHHHHHHHhh
Confidence 444 3443321111 112346678888776654 257888899999876542211100 0000000000
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
......+...+|||+++..++.++. . -++.+.+.|
T Consensus 214 ~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdg 250 (261)
T PRK08690 214 HNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDG 250 (261)
T ss_pred cCCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcC
Confidence 0001235678999999999998643 2 366677764
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.079 Score=39.74 Aligned_cols=144 Identities=10% Similarity=0.049 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|++|.+++.+++. ..|++||+++... ..+..++++++. +.+.-.+++.
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~i 136 (252)
T PRK07677 57 MDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINM 136 (252)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 48888888877653 5799999987421 123345556553 3320134553
Q ss_pred C-CcccCCCCCCCCCCchhhHHHHHHHHHHHHh--------cCCCeEEEecccccccccc-cccCCCCCCceEEEecCCc
Q 038413 50 S-EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA--------VEIPYTFVSANCYGAYFVN-VLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 50 s-~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~tilrp~~~~~~~~~-~~~~~~~~~~~~~~~~~g~ 119 (191)
| .++.... .....|..+|...+.+.+. .|+..+.++||++...... .... ........-...
T Consensus 137 sS~~~~~~~-----~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~---~~~~~~~~~~~~ 208 (252)
T PRK07677 137 VATYAWDAG-----PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE---SEEAAKRTIQSV 208 (252)
T ss_pred cChhhccCC-----CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccC---CHHHHHHHhccC
Confidence 3 3332111 1123567788777766542 3788899999987632111 1000 000000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
....+...+|+|+++..++..+. . .++.+.+.+
T Consensus 209 ~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g 243 (252)
T PRK07677 209 PLGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDG 243 (252)
T ss_pred CCCCCCCHHHHHHHHHHHcCccccccCCCEEEECC
Confidence 01125678999998888776542 2 356666653
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.28 Score=36.04 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=72.1
Q ss_pred CCCCCHHHHHHhh---c--cCcEEEEccCCCC---------------------cccHHHHHHHHHH----cCCccEEE-c
Q 038413 1 GELDEHEKIVSIL---K--EVDVVISTVAYPQ---------------------FLDQLKIVHAIKV----AGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~---~--g~d~V~~~~~~~~---------------------~~~~~~li~aa~~----~g~vkr~v-~ 49 (191)
+|+.|.+++.+++ . ..|+|||+++... +.+..++++++.+ .+ .+++ .
T Consensus 51 ~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iv~i 128 (222)
T PRK06953 51 LDVADPASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAG--GVLAVL 128 (222)
T ss_pred ecCCCHHHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccC--CeEEEE
Confidence 5888988887754 3 4799999987641 1334666666653 22 1333 2
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHhc-----CCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEAV-----EIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~~-----~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
++ .+...... ..+...|..+|..++.+++.. ++..+.++||++..... . + ..
T Consensus 129 sS~~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~--------~----------~--~~ 186 (222)
T PRK06953 129 SSRMGSIGDAT--GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMG--------G----------A--QA 186 (222)
T ss_pred cCccccccccc--CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCC--------C----------C--CC
Confidence 33 22211111 112235788999888887752 55667788886544210 0 0 12
Q ss_pred ecchhhHHHHHHHHhcCc-c-cCCceeEee
Q 038413 124 FNYEEDIAKCTIKVINDP-R-TCNRIVIYR 151 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~ 151 (191)
....++.+..+..++... . ..+..+...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (222)
T PRK06953 187 ALDPAQSVAGMRRVIAQATRRDNGRFFQYD 216 (222)
T ss_pred CCCHHHHHHHHHHHHHhcCcccCceEEeeC
Confidence 357788888888877643 2 334444443
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.057 Score=40.28 Aligned_cols=135 Identities=12% Similarity=0.103 Sum_probs=74.5
Q ss_pred CCCCCHHHHHHhhc-----------cCcEEEEccCCCC--------------------ccc----HHHHHHHHHHcCCcc
Q 038413 1 GELDEHEKIVSILK-----------EVDVVISTVAYPQ--------------------FLD----QLKIVHAIKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-----------g~d~V~~~~~~~~--------------------~~~----~~~li~aa~~~g~vk 45 (191)
+|+.|.+++.+++. ..|++||+++... ..+ ...++..+++.+ ..
T Consensus 52 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ 130 (243)
T PRK07023 52 LDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ER 130 (243)
T ss_pred eccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CC
Confidence 58888888877542 3689999987531 112 344555555555 56
Q ss_pred EEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEe---
Q 038413 46 RFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY--- 115 (191)
Q Consensus 46 r~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~--- 115 (191)
+++. |+...... ..+...|..+|..++.+++. .++.+..++||++........... ........
T Consensus 131 ~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--~~~~~~~~~~~ 204 (243)
T PRK07023 131 RILHISSGAARNA----YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRAT--DEERFPMRERF 204 (243)
T ss_pred EEEEEeChhhcCC----CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhc--ccccchHHHHH
Confidence 7664 44322111 12344677889888888762 378889999998755432111000 00000000
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
..-.....++..+|+|..++..+..++
T Consensus 205 ~~~~~~~~~~~~~~va~~~~~~l~~~~ 231 (243)
T PRK07023 205 RELKASGALSTPEDAARRLIAYLLSDD 231 (243)
T ss_pred HHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence 000001135678899997777777654
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.041 Score=41.21 Aligned_cols=144 Identities=11% Similarity=0.095 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhccC---------c--EEEEccCCCC--------------------ccc----HHHHHHHHHHcCCcc
Q 038413 1 GELDEHEKIVSILKEV---------D--VVISTVAYPQ--------------------FLD----QLKIVHAIKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~---------d--~V~~~~~~~~--------------------~~~----~~~li~aa~~~g~vk 45 (191)
+|+.|.+++.++++.+ + .++++++... ..+ .+.++..+++.+..+
T Consensus 55 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 134 (251)
T PRK06924 55 LDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDK 134 (251)
T ss_pred ecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCc
Confidence 5888988888777532 1 6777766421 111 345556565543145
Q ss_pred EEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEEe
Q 038413 46 RFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY 115 (191)
Q Consensus 46 r~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~ 115 (191)
++|. |+...... ..+...|..+|..++.+.+. .++....++||++..+........ ........
T Consensus 135 ~iv~~sS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~ 208 (251)
T PRK06924 135 RVINISSGAAKNP----YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSS--SKEDFTNL 208 (251)
T ss_pred eEEEecchhhcCC----CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhc--CcccchHH
Confidence 6653 43221111 12344677888888777642 357778889998765432211000 00000000
Q ss_pred c---CCcceeeecchhhHHHHHHHHhcCcc-cCCceeEe
Q 038413 116 G---NGEAKAVFNYEEDIAKCTIKVINDPR-TCNRIVIY 150 (191)
Q Consensus 116 ~---~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i 150 (191)
. ......-+.+.+|+|+.+..++.++. ..++.+.+
T Consensus 209 ~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~G~~~~v 247 (251)
T PRK06924 209 DRFITLKEEGKLLSPEYVAKALRNLLETEDFPNGEVIDI 247 (251)
T ss_pred HHHHHHhhcCCcCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence 0 00001125789999999999998743 22444444
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.17 Score=37.45 Aligned_cols=141 Identities=10% Similarity=0.065 Sum_probs=73.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcC-CccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAG-NIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g-~vkr~v~ 49 (191)
+|+.|.+++.+++. +.|++||+++... ..+. +.++..+++.+ ...+++.
T Consensus 53 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~ 132 (236)
T PRK06483 53 ADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIH 132 (236)
T ss_pred cCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 48888888776653 3799999998531 0111 22334443332 0124553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .....|..+|..++.+.+. .++....++||++....... ....... ......+
T Consensus 133 ~ss~~~~~~~----~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~---~~~~~~~- 201 (236)
T PRK06483 133 ITDYVVEKGS----DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD---AAYRQKA---LAKSLLK- 201 (236)
T ss_pred EcchhhccCC----CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC---HHHHHHH---hccCccc-
Confidence 332211110 1233577899988877663 24677789999764321000 0000000 0000001
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~ 152 (191)
-+...+|+|+++..++....-.++.+.+.|
T Consensus 202 ~~~~~~~va~~~~~l~~~~~~~G~~i~vdg 231 (236)
T PRK06483 202 IEPGEEEIIDLVDYLLTSCYVTGRSLPVDG 231 (236)
T ss_pred cCCCHHHHHHHHHHHhcCCCcCCcEEEeCc
Confidence 134679999999998874333467777764
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.083 Score=39.78 Aligned_cols=145 Identities=13% Similarity=0.140 Sum_probs=75.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcC-CccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAG-NIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g-~vkr~v- 48 (191)
+|++|.+++.++++ ..|+++|+++... +.+...+.+++...- .-.+++
T Consensus 62 ~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~ 141 (252)
T PRK06079 62 CDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVT 141 (252)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEE
Confidence 48889888876653 4799999987521 011223333333210 002443
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
.|+.+..... .....|..+|..++.+.+. .|+....+.||+........... ..............
T Consensus 142 iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~ 214 (252)
T PRK06079 142 LTYFGSERAI----PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG---HKDLLKESDSRTVD 214 (252)
T ss_pred EeccCccccC----CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC---hHHHHHHHHhcCcc
Confidence 3332211110 1123567789888877653 47888999999876543221100 00000000000001
Q ss_pred eeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
.-+...+|||+++..++.+. .. -++.+.+.|
T Consensus 215 ~r~~~pedva~~~~~l~s~~~~~itG~~i~vdg 247 (252)
T PRK06079 215 GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDK 247 (252)
T ss_pred cCCCCHHHHHHHHHHHhCcccccccccEEEeCC
Confidence 12567899999999988764 22 356666653
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.18 Score=38.02 Aligned_cols=147 Identities=9% Similarity=0.070 Sum_probs=76.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----c----------------cc----HHHHHHHHH-HcCCccEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----F----------------LD----QLKIVHAIK-VAGNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----~----------------~~----~~~li~aa~-~~g~vkr~ 47 (191)
+|+.|.+++.++++ +.|++||+++... . .+ ...++..+. +.+ -.++
T Consensus 55 ~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~g~i 133 (259)
T PRK08340 55 ADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-KGVL 133 (259)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-CCEE
Confidence 48889888877763 5799999998521 0 00 122333333 233 3466
Q ss_pred Ec-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc-C-C---CCCCce--E
Q 038413 48 LP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL-R-P---FEPHDD--V 112 (191)
Q Consensus 48 v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~-~-~---~~~~~~--~ 112 (191)
|. |+...... ..+...|..+|..++.+.+. .|+....+.||++......... . . ...... .
T Consensus 134 v~isS~~~~~~----~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 209 (259)
T PRK08340 134 VYLSSVSVKEP----MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWE 209 (259)
T ss_pred EEEeCcccCCC----CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHH
Confidence 53 43221111 11234566788887776653 4677888999987664321100 0 0 000000 0
Q ss_pred EEecCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 113 VVYGNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 113 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..........-+...+|||++++.++.++. . -++.+.+.|
T Consensus 210 ~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdg 251 (259)
T PRK08340 210 REVLERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDG 251 (259)
T ss_pred HHHhccCCccCCCCHHHHHHHHHHHcCcccccccCceEeecC
Confidence 000000000125678999999999888643 3 356666664
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.089 Score=39.75 Aligned_cols=147 Identities=5% Similarity=0.020 Sum_probs=77.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... ....+.++..+++.+ ..+++.
T Consensus 66 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~i 144 (265)
T PRK07062 66 CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCV 144 (265)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEe
Confidence 48889888776653 4799999998532 011344555666665 456653
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEeccccccccccc-ccCCCCCCceEEEe------
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNV-LLRPFEPHDDVVVY------ 115 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~-~~~~~~~~~~~~~~------ 115 (191)
|+....... .....|..+|...+.+.+ ..|+..+.++||++....... +............+
T Consensus 145 sS~~~~~~~----~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (265)
T PRK07062 145 NSLLALQPE----PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALAR 220 (265)
T ss_pred ccccccCCC----CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhh
Confidence 432211111 112345567776655543 258899999999876543221 10000000000000
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+....-+...+|+|+++..++.+.. . -++.+.+.|
T Consensus 221 ~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdg 259 (265)
T PRK07062 221 KKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSG 259 (265)
T ss_pred cCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcC
Confidence 000001124578999999998887532 2 356677763
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.11 Score=40.28 Aligned_cols=133 Identities=14% Similarity=0.068 Sum_probs=73.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc---CCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA---GNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~---g~vkr~v~-s 50 (191)
+|++|.+++.++++ ..|+|||+++... +.+..++++++... . -.++|. |
T Consensus 64 ~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~is 142 (296)
T PRK05872 64 ADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVS 142 (296)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEe
Confidence 48889888877653 4799999998632 12234444544321 1 235553 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC-c-ce
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG-E-AK 121 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g-~-~~ 121 (191)
+.+..... .....|..+|..++.+.+. .|+..+.++||++.......... ........... . ..
T Consensus 143 S~~~~~~~----~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~---~~~~~~~~~~~~~~p~ 215 (296)
T PRK05872 143 SLAAFAAA----PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADA---DLPAFRELRARLPWPL 215 (296)
T ss_pred CHhhcCCC----CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccc---cchhHHHHHhhCCCcc
Confidence 42211111 1234577888888776542 57888999999876543221100 00000000000 0 01
Q ss_pred eeecchhhHHHHHHHHhcCc
Q 038413 122 AVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~ 141 (191)
..+...+|+|+.+..++.+.
T Consensus 216 ~~~~~~~~va~~i~~~~~~~ 235 (296)
T PRK05872 216 RRTTSVEKCAAAFVDGIERR 235 (296)
T ss_pred cCCCCHHHHHHHHHHHHhcC
Confidence 23567999999999998864
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.3 Score=36.85 Aligned_cols=146 Identities=9% Similarity=-0.053 Sum_probs=76.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------------cccHHHHHHHHH----HcCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------------FLDQLKIVHAIK----VAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------------~~~~~~li~aa~----~~g~vk 45 (191)
+|+.|.+++.++++ ..|++||+++... +.+...+++++. +.+ .
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g 136 (263)
T PRK06200 59 GDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG--G 136 (263)
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC--C
Confidence 48888888777664 4799999998531 011233344433 333 2
Q ss_pred EEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccc-cCCC---CCC-c-eE
Q 038413 46 RFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVL-LRPF---EPH-D-DV 112 (191)
Q Consensus 46 r~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~-~~~~---~~~-~-~~ 112 (191)
++| .++....... .....|..+|..++.+.+. .++....+.||++........ .... ... . ..
T Consensus 137 ~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~ 212 (263)
T PRK06200 137 SMIFTLSNSSFYPG----GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLA 212 (263)
T ss_pred EEEEECChhhcCCC----CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchh
Confidence 444 3332111111 1233577889888877653 247778889998765432110 0000 000 0 00
Q ss_pred EEecCCcceeeecchhhHHHHHHHHhcCc-c-c-CCceeEeec
Q 038413 113 VVYGNGEAKAVFNYEEDIAKCTIKVINDP-R-T-CNRIVIYRP 152 (191)
Q Consensus 113 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~-~-~-~~~~~~i~~ 152 (191)
..........-+...+|+|.++..++.++ . . -++.+.+.|
T Consensus 213 ~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdg 255 (263)
T PRK06200 213 DMIAAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADG 255 (263)
T ss_pred HHhhcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcC
Confidence 00001110123567899999999988765 3 2 356677764
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.18 Score=39.17 Aligned_cols=96 Identities=13% Similarity=0.039 Sum_probs=57.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------ccc----HHHHHHHHHHcCCccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------FLD----QLKIVHAIKVAGNIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------~~~----~~~li~aa~~~g~vkr~v~-s~ 51 (191)
+|+.|.+++.++++ +.|+|||+++... ..+ +..+++.+++.+ ..++|. |+
T Consensus 74 ~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS 152 (306)
T PRK06197 74 LDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSS 152 (306)
T ss_pred CCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECC
Confidence 58889888877764 4799999998531 112 456777887776 667763 43
Q ss_pred cccC----C--CCC---CCCCCchhhHHHHHHHHHHHHh-------cCCCeEE--Eeccccccc
Q 038413 52 FGCE----E--DRV---RPLPPFEAYLEKKRIVRRAIEA-------VEIPYTF--VSANCYGAY 97 (191)
Q Consensus 52 ~g~~----~--~~~---~~~~~~~~~~~~k~~~e~~l~~-------~~~~~ti--lrp~~~~~~ 97 (191)
.+.. . ... ....+...|..+|...+.+.+. .+++.++ +.||+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 153 GGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred HHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 2210 0 000 0112345677899887766543 3555443 468876554
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.18 Score=38.55 Aligned_cols=141 Identities=12% Similarity=0.079 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------ccc----HHHHHHHHHHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLD----QLKIVHAIKVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~----~~~li~aa~~~g~vkr 46 (191)
+|+.|.+++.++++ ..|++||+++... +.+ ++.++..+++.| +
T Consensus 62 ~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g---~ 138 (274)
T PRK08415 62 LDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGA---S 138 (274)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCC---c
Confidence 48899888877653 4799999998521 011 233333443333 4
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+.+..... .....|..+|..+..+.+. .|+....+.||++......... ... ...... ..
T Consensus 139 Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~--~~~-~~~~~~-~~ 210 (274)
T PRK08415 139 VLTLSYLGGVKYV----PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIG--DFR-MILKWN-EI 210 (274)
T ss_pred EEEEecCCCccCC----CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccc--hhh-HHhhhh-hh
Confidence 44 3443221111 1123466788887766543 4788888999987653211100 000 000000 00
Q ss_pred cce-eeecchhhHHHHHHHHhcCc-cc-CCceeEeec
Q 038413 119 EAK-AVFNYEEDIAKCTIKVINDP-RT-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~-~~~i~~~Dva~~~~~~l~~~-~~-~~~~~~i~~ 152 (191)
..+ .-+...+|||++++.++.++ .. -++.+.+.|
T Consensus 211 ~~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdG 247 (274)
T PRK08415 211 NAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDA 247 (274)
T ss_pred hCchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcC
Confidence 011 12467899999999988764 22 356677764
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.16 Score=37.61 Aligned_cols=135 Identities=15% Similarity=0.203 Sum_probs=74.8
Q ss_pred CCCCCHHHHHHh---hccCcEEEEccCCCC---------c--------------------ccHHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSI---LKEVDVVISTVAYPQ---------F--------------------LDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a---~~g~d~V~~~~~~~~---------~--------------------~~~~~li~aa~~~g~vkr~v 48 (191)
+|+.|.+++.++ +.+.|+|||+++... . ...+.++..+++.+ ..+++
T Consensus 50 ~Dls~~~~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~ 128 (235)
T PRK09009 50 LDVTDEAEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFA 128 (235)
T ss_pred ecCCCHHHHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEE
Confidence 488888876664 447899999998641 0 01223444455454 44544
Q ss_pred -cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 49 -PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 49 -~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
.|+ .+...... ..+...|..+|..++.+++. .++....+.||.......... .. ..+
T Consensus 129 ~iss~~~~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-----~~---~~~-- 196 (235)
T PRK09009 129 VISAKVGSISDNR--LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-----QQ---NVP-- 196 (235)
T ss_pred EEeecccccccCC--CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-----hh---ccc--
Confidence 332 33211111 12234577789888877653 245566678887554321110 00 001
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
...++..+|+|+.+..++..+. ..+..+.+.
T Consensus 197 ---~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~ 229 (235)
T PRK09009 197 ---KGKLFTPEYVAQCLLGIIANATPAQSGSFLAYD 229 (235)
T ss_pred ---cCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeC
Confidence 1224678999999999998753 234555554
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.42 Score=36.50 Aligned_cols=125 Identities=15% Similarity=0.223 Sum_probs=75.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCccEEE--
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIKRFL-- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vkr~v-- 48 (191)
.|+.+++++.+... .+|++++++|... ..-+..++.-+.+.| --++|
T Consensus 63 ~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI 141 (265)
T COG0300 63 ADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINI 141 (265)
T ss_pred CcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 48888888777653 5899999999753 112344455555554 33555
Q ss_pred cCCcccCCCCCCCCCCc-hhhHHHHHHHHHH-------HHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSEFGCEEDRVRPLPPF-EAYLEKKRIVRRA-------IEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~-~~~~~~k~~~e~~-------l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|..|... .|. ..|..+|..+-.+ |+.+|+..+.+.||+....+... .. .+... ...
T Consensus 142 ~S~ag~~p------~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-~~----~~~~~----~~~ 206 (265)
T COG0300 142 GSAAGLIP------TPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-KG----SDVYL----LSP 206 (265)
T ss_pred echhhcCC------CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-cc----ccccc----ccc
Confidence 23333221 232 3466788655444 34468999999999877654331 00 00000 011
Q ss_pred eeeecchhhHHHHHHHHhcCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~ 141 (191)
..-+.+.+|+|+.....+...
T Consensus 207 ~~~~~~~~~va~~~~~~l~~~ 227 (265)
T COG0300 207 GELVLSPEDVAEAALKALEKG 227 (265)
T ss_pred hhhccCHHHHHHHHHHHHhcC
Confidence 245678999999999999874
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.15 Score=38.62 Aligned_cols=84 Identities=12% Similarity=0.004 Sum_probs=48.9
Q ss_pred chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce--eeecchhhHHHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK--AVFNYEEDIAKCTI 135 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~i~~~Dva~~~~ 135 (191)
...|..+|..++.+.+. .|+..+.++||++..+. .. ...... .+.. ..+ ..+...+|+|.+++
T Consensus 170 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~--~~-~~~~~~----~~~~-~~~~~~~~~~~~~va~~~~ 241 (267)
T TIGR02685 170 FTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPD--AM-PFEVQE----DYRR-KVPLGQREASAEQIADVVI 241 (267)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcc--cc-chhHHH----HHHH-hCCCCcCCCCHHHHHHHHH
Confidence 34677899988877653 47999999999864321 00 000000 0000 001 12457899999999
Q ss_pred HHhcCcc-c-CCceeEeecCCCcc
Q 038413 136 KVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 136 ~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
.++.++. . .++.+.+.+ +..+
T Consensus 242 ~l~~~~~~~~~G~~~~v~g-g~~~ 264 (267)
T TIGR02685 242 FLVSPKAKYITGTCIKVDG-GLSL 264 (267)
T ss_pred HHhCcccCCcccceEEECC-ceec
Confidence 9887643 2 366667764 4443
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.4 Score=35.74 Aligned_cols=111 Identities=13% Similarity=0.115 Sum_probs=62.4
Q ss_pred ccCcEEEEccCCCC--------------------cccHHHHHHH----HHHcCCccEEEc-CCcccCCCCCCCCCCchhh
Q 038413 14 KEVDVVISTVAYPQ--------------------FLDQLKIVHA----IKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAY 68 (191)
Q Consensus 14 ~g~d~V~~~~~~~~--------------------~~~~~~li~a----a~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~ 68 (191)
...|+|||+++... +.+..+++++ +++.+ .++++. |+....... .....|
T Consensus 91 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~----~~~~~Y 165 (247)
T PRK08945 91 GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGR----ANWGAY 165 (247)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCC----CCCccc
Confidence 35799999987521 1233334444 45666 778763 442211111 112356
Q ss_pred HHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCc
Q 038413 69 LEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 69 ~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
..+|..++.+++. .++..+.++||.+........ . .. .....+...+|+++++..++.++
T Consensus 166 ~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~-~---~~---------~~~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 166 AVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA-F---PG---------EDPQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh-c---Cc---------ccccCCCCHHHHHHHHHHHhCcc
Confidence 7788887776653 367788889886544210000 0 00 00123567899999999988764
Q ss_pred c
Q 038413 142 R 142 (191)
Q Consensus 142 ~ 142 (191)
.
T Consensus 233 ~ 233 (247)
T PRK08945 233 S 233 (247)
T ss_pred c
Confidence 3
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.2 Score=37.85 Aligned_cols=142 Identities=10% Similarity=0.067 Sum_probs=74.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccH----HHHHHHHHHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQ----LKIVHAIKVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~----~~li~aa~~~g~vkr 46 (191)
+|+.|.+++.++++ ..|+++++++... ..+. +.++..+++.| +
T Consensus 67 ~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g---~ 143 (258)
T PRK07533 67 LDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGG---S 143 (258)
T ss_pred cCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCC---E
Confidence 48888888776653 4799999987521 0111 22333333333 3
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
++ .|+.+..... .....|..+|..++.+.+. .|+....+.||............ .. .........
T Consensus 144 Ii~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~ 216 (258)
T PRK07533 144 LLTMSYYGAEKVV----ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDD--FD-ALLEDAAER 216 (258)
T ss_pred EEEEeccccccCC----ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCC--cH-HHHHHHHhc
Confidence 43 3443321111 1123466788887766542 57888899999876543211100 00 000000000
Q ss_pred cceeeecchhhHHHHHHHHhcCc-c-cCCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDP-R-TCNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~~ 152 (191)
.....+...+|+|++++.++.++ . --++.+.+.|
T Consensus 217 ~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdg 252 (258)
T PRK07533 217 APLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDG 252 (258)
T ss_pred CCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCC
Confidence 00012467899999999988764 2 2356666653
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.45 Score=36.31 Aligned_cols=141 Identities=9% Similarity=0.111 Sum_probs=74.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHH----HHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAI----KVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa----~~~g~vkr 46 (191)
+|+.|.+++.++++ ..|+++|+++... ..+..++.+++ ++.| +
T Consensus 64 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G---~ 140 (271)
T PRK06505 64 CDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGG---S 140 (271)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCc---e
Confidence 58899888776653 4799999998431 11122233332 2223 4
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+....... .....|..+|..++.+.+. .|+....+.||++.......... ........ ..
T Consensus 141 Iv~isS~~~~~~~----~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~---~~~~~~~~-~~ 212 (271)
T PRK06505 141 MLTLTYGGSTRVM----PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD---ARAIFSYQ-QR 212 (271)
T ss_pred EEEEcCCCccccC----CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc---hHHHHHHH-hh
Confidence 44 2332111110 1123567888888766543 47888899999876532111100 00000000 00
Q ss_pred cce-eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 119 EAK-AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~-~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+ .-+...+|+|++++.++.++. . -++.+.+.|
T Consensus 213 ~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdg 249 (271)
T PRK06505 213 NSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDS 249 (271)
T ss_pred cCCccccCCHHHHHHHHHHHhCccccccCceEEeecC
Confidence 001 124578999999999887643 2 256677764
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.29 Score=37.41 Aligned_cols=144 Identities=10% Similarity=0.126 Sum_probs=76.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcC-CccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAG-NIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g-~vkr~v- 48 (191)
+|+.|.+++.++++ ..|+++|+++... +.+...+++++...= .-.++|
T Consensus 67 ~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~ 146 (272)
T PRK08159 67 CDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILT 146 (272)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 58889888887653 4799999997421 112233444433210 002333
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
.|+.+..... .....|..+|..++.+.+. .|+....+.||++......... .. ....-+.....+
T Consensus 147 iss~~~~~~~----p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~--~~--~~~~~~~~~~~p 218 (272)
T PRK08159 147 LTYYGAEKVM----PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIG--DF--RYILKWNEYNAP 218 (272)
T ss_pred EeccccccCC----CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCC--cc--hHHHHHHHhCCc
Confidence 3443321110 1123466788888776653 4788888999987653211100 00 000000000011
Q ss_pred -eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 -AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 -~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|+|++++.++.+.. . -++.+.+.|
T Consensus 219 ~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdg 252 (272)
T PRK08159 219 LRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDS 252 (272)
T ss_pred ccccCCHHHHHHHHHHHhCccccCccceEEEECC
Confidence 124678999999999987643 2 366777774
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.19 Score=39.33 Aligned_cols=25 Identities=12% Similarity=0.310 Sum_probs=20.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAY 25 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~ 25 (191)
+|+.|.+++.++++ ..|+|||+++.
T Consensus 62 ~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~ 93 (322)
T PRK07453 62 IDLGDLDSVRRFVDDFRALGKPLDALVCNAAV 93 (322)
T ss_pred ecCCCHHHHHHHHHHHHHhCCCccEEEECCcc
Confidence 48899998887775 38999999984
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.044 Score=44.15 Aligned_cols=45 Identities=20% Similarity=0.318 Sum_probs=35.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s 50 (191)
.|+.|.++|.++++++|+|++++++. ....++++|.++| + ++|..
T Consensus 53 ~d~~~~~~l~~~~~~~dvVin~~gp~---~~~~v~~~~i~~g-~-~yvD~ 97 (386)
T PF03435_consen 53 VDVNDPESLAELLRGCDVVINCAGPF---FGEPVARACIEAG-V-HYVDT 97 (386)
T ss_dssp --TTTHHHHHHHHTTSSEEEE-SSGG---GHHHHHHHHHHHT---EEEES
T ss_pred EecCCHHHHHHHHhcCCEEEECCccc---hhHHHHHHHHHhC-C-Ceecc
Confidence 48899999999999999999999865 5578999999999 5 67753
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.22 Score=37.87 Aligned_cols=152 Identities=13% Similarity=0.105 Sum_probs=78.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------c----------------ccHHHHHHHHHH---cCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------F----------------LDQLKIVHAIKV---AGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------~----------------~~~~~li~aa~~---~g~vkr 46 (191)
+|+.|.+++.++++ ..|++||+++... . .+...+.+++.. .+ .+
T Consensus 63 ~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--g~ 140 (262)
T PRK07984 63 CDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SA 140 (262)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC--cE
Confidence 58899888887763 3799999997421 0 011123333321 11 23
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
++ .|+.+..... .....|..+|..++.+.+. .|+....+.||+......... .... .........
T Consensus 141 Iv~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~--~~~~-~~~~~~~~~ 213 (262)
T PRK07984 141 LLTLSYLGAERAI----PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI--KDFR-KMLAHCEAV 213 (262)
T ss_pred EEEEecCCCCCCC----CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC--CchH-HHHHHHHHc
Confidence 44 3443321111 1123466789888877653 478888899998755321100 0000 000000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHH
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLE 161 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e 161 (191)
....-+...+|||+++..++.++. -.++.+.+.++-....++|
T Consensus 214 ~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~~~~~~~~ 258 (262)
T PRK07984 214 TPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNE 258 (262)
T ss_pred CCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCCccccccch
Confidence 000134678999999999887642 2366777764213344444
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.63 Score=37.90 Aligned_cols=114 Identities=14% Similarity=0.186 Sum_probs=66.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------cccHHHHHHHH----HHcCC-c-cE-EEc-CCcccCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------FLDQLKIVHAI----KVAGN-I-KR-FLP-SEFGCEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------~~~~~~li~aa----~~~g~-v-kr-~v~-s~~g~~~ 56 (191)
+|+.|.+++.+.+.++|++||++|... ..+..++++++ ++.+. . +. ++. |+.+..
T Consensus 231 ~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~~- 309 (406)
T PRK07424 231 WQVGQEAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEVN- 309 (406)
T ss_pred eeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccccc-
Confidence 488999999999999999999987531 22334444443 33330 1 12 333 332111
Q ss_pred CCCCCCCCc-hhhHHHHHHHHHHH--Hh--cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHH
Q 038413 57 DRVRPLPPF-EAYLEKKRIVRRAI--EA--VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIA 131 (191)
Q Consensus 57 ~~~~~~~~~-~~~~~~k~~~e~~l--~~--~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva 131 (191)
.+. ..|..+|.++..+. +. .+.....+.||++.... .+...++.+|+|
T Consensus 310 ------~~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~---------------------~~~~~~spe~vA 362 (406)
T PRK07424 310 ------PAFSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNL---------------------NPIGVMSADWVA 362 (406)
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCC---------------------CcCCCCCHHHHH
Confidence 122 24778998887743 22 34445555666533210 011246889999
Q ss_pred HHHHHHhcCcc
Q 038413 132 KCTIKVINDPR 142 (191)
Q Consensus 132 ~~~~~~l~~~~ 142 (191)
+.++..+..++
T Consensus 363 ~~il~~i~~~~ 373 (406)
T PRK07424 363 KQILKLAKRDF 373 (406)
T ss_pred HHHHHHHHCCC
Confidence 99999998753
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.22 Score=37.65 Aligned_cols=147 Identities=9% Similarity=-0.032 Sum_probs=76.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC----------------------------cccHHHHHHHHH----Hc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ----------------------------FLDQLKIVHAIK----VA 41 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~----------------------------~~~~~~li~aa~----~~ 41 (191)
+|+.|.+++.++++ ..|++||+++... +.+...+++++. +.
T Consensus 56 ~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (266)
T PRK06171 56 TDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ 135 (266)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc
Confidence 48889888877664 4799999997421 122344555544 33
Q ss_pred CCccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccc--ccC---C--C
Q 038413 42 GNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNV--LLR---P--F 106 (191)
Q Consensus 42 g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~--~~~---~--~ 106 (191)
+ -.++|. |+....... .....|..+|..++.+.+. .|+....++||.+....+.. ... . .
T Consensus 136 ~-~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~ 210 (266)
T PRK06171 136 H-DGVIVNMSSEAGLEGS----EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRG 210 (266)
T ss_pred C-CcEEEEEccccccCCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccC
Confidence 3 335553 332111111 1234567788888766543 47889999999874211110 000 0 0
Q ss_pred CC-CceEEEecC--CcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 107 EP-HDDVVVYGN--GEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 107 ~~-~~~~~~~~~--g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.. ......+.. ......+...+|||.++..++.+.. . -++.+.+.|
T Consensus 211 ~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdg 261 (266)
T PRK06171 211 ITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAG 261 (266)
T ss_pred CCHHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecC
Confidence 00 000000000 0001124567999999988887543 2 256666653
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.36 Score=36.53 Aligned_cols=144 Identities=11% Similarity=0.072 Sum_probs=74.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------c----------------ccHHHHHHHHHHc--CCccEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------F----------------LDQLKIVHAIKVA--GNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------~----------------~~~~~li~aa~~~--g~vkr~ 47 (191)
+|+.|.+++.++++ ..|+++++++... . .+...+.+++... + -.++
T Consensus 63 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-~g~I 141 (260)
T PRK06997 63 CDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-DASL 141 (260)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-CceE
Confidence 48899988887763 4799999987521 0 0111223332221 1 1244
Q ss_pred E-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 L-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
+ .|+.+..... .....|..+|..+..+.+. .|+....+.||++.......... .. ..........
T Consensus 142 i~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~--~~-~~~~~~~~~~ 214 (260)
T PRK06997 142 LTLSYLGAERVV----PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD--FG-KILDFVESNA 214 (260)
T ss_pred EEEeccccccCC----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc--hh-hHHHHHHhcC
Confidence 4 3433221111 1133477889888776553 47888889999865531111000 00 0000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
...-+...+|||+++..++.++. . -++.+.+.|
T Consensus 215 p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdg 249 (260)
T PRK06997 215 PLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDS 249 (260)
T ss_pred cccccCCHHHHHHHHHHHhCccccCcceeEEEEcC
Confidence 00124678999999999988642 2 256666653
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.047 Score=40.76 Aligned_cols=141 Identities=11% Similarity=0.179 Sum_probs=77.1
Q ss_pred CCCCCHHHHHHhh--------ccCcEEEEccCCCCc-----------------------cc----HHHHHHHHHHcCCcc
Q 038413 1 GELDEHEKIVSIL--------KEVDVVISTVAYPQF-----------------------LD----QLKIVHAIKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~--------~g~d~V~~~~~~~~~-----------------------~~----~~~li~aa~~~g~vk 45 (191)
+|+.|.+++.+++ ...|+++|+++.... .. .+.++..+++.|
T Consensus 51 ~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--- 127 (241)
T PF13561_consen 51 CDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGG--- 127 (241)
T ss_dssp SCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEE---
T ss_pred ecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC---
Confidence 4788888877764 357999998865320 11 233344444444
Q ss_pred EEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------h-cCCCeEEEecccccccccccccCCCCCCceEEEec
Q 038413 46 RFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------A-VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG 116 (191)
Q Consensus 46 r~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~-~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (191)
++| .|+.+..... .....|..+|..++.+.+ . .|+....+.||++........... .+......
T Consensus 128 sii~iss~~~~~~~----~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~---~~~~~~~~ 200 (241)
T PF13561_consen 128 SIINISSIAAQRPM----PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGN---EEFLEELK 200 (241)
T ss_dssp EEEEEEEGGGTSBS----TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTH---HHHHHHHH
T ss_pred CcccccchhhcccC----ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccc---cchhhhhh
Confidence 333 3332221111 123356678888877654 3 578888999999886532221100 00000000
Q ss_pred CCcce-eeecchhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 117 NGEAK-AVFNYEEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 117 ~g~~~-~~~i~~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
...+ .-+...+|||.++..++.+.. .. |+.+.+.|
T Consensus 201 -~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG 238 (241)
T PF13561_consen 201 -KRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDG 238 (241)
T ss_dssp -HHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred -hhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence 0001 123579999999999998753 33 67777764
|
... |
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.44 Score=36.03 Aligned_cols=142 Identities=11% Similarity=0.079 Sum_probs=74.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------c----------------ccHHHHHHHHH----HcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------F----------------LDQLKIVHAIK----VAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------~----------------~~~~~li~aa~----~~g~vkr 46 (191)
+|+.|.+++.++++ ..|+++|+++... . .+...+++++. +.| +
T Consensus 66 ~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g---~ 142 (257)
T PRK08594 66 CDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGG---S 142 (257)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCc---e
Confidence 48889888877653 3799999987421 0 01122233333 223 4
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+....... .....|..+|..++.+.+. .|+....+.||++.......... ... ........
T Consensus 143 Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~--~~~-~~~~~~~~ 215 (257)
T PRK08594 143 IVTLTYLGGERVV----QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG--FNS-ILKEIEER 215 (257)
T ss_pred EEEEcccCCccCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc--ccH-HHHHHhhc
Confidence 44 3332211110 1123567889888776543 47888899999876542111100 000 00000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.....+...+|+|++++.++.+.. . -++.+.+.|
T Consensus 216 ~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dg 251 (257)
T PRK08594 216 APLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDS 251 (257)
T ss_pred CCccccCCHHHHHHHHHHHcCcccccccceEEEECC
Confidence 001124678999999999887643 2 256666653
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=1.1 Score=33.23 Aligned_cols=62 Identities=10% Similarity=-0.045 Sum_probs=39.8
Q ss_pred hhhHHHHHHHHHHHHh-------c-CCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHH
Q 038413 66 EAYLEKKRIVRRAIEA-------V-EIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKV 137 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~-------~-~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 137 (191)
..|..+|..++.+++. . ++..+.++||.+......... + +.........+|++..+.-.
T Consensus 158 ~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~~ 224 (239)
T PRK08703 158 GGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH-----------P--GEAKSERKSYGDVLPAFVWW 224 (239)
T ss_pred cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC-----------C--CCCccccCCHHHHHHHHHHH
Confidence 3577889888877653 1 477888999987764321110 1 11112346889999998888
Q ss_pred hcC
Q 038413 138 IND 140 (191)
Q Consensus 138 l~~ 140 (191)
+..
T Consensus 225 ~~~ 227 (239)
T PRK08703 225 ASA 227 (239)
T ss_pred hCc
Confidence 874
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.77 Score=35.30 Aligned_cols=140 Identities=6% Similarity=0.044 Sum_probs=73.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHH----HHHHcCC-----cc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGN-----IK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~-----vk 45 (191)
+|+.|.+++.++++ ..|++||+++... +.+...+.+ .+++.+. -.
T Consensus 71 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g 150 (286)
T PRK07791 71 DDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDA 150 (286)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCc
Confidence 48888888776653 4799999998632 122223333 3332210 02
Q ss_pred EEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 46 RFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 46 r~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
++|. |+....... .....|..+|..++.+.+. .|+....+.|| ........... .... ...
T Consensus 151 ~Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~-~~~~----~~~- 219 (286)
T PRK07791 151 RIINTSSGAGLQGS----VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFA-EMMA----KPE- 219 (286)
T ss_pred EEEEeCchhhCcCC----CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHH-HHHh----cCc-
Confidence 4552 432211111 1133567788887766542 57888889998 32211111000 0000 000
Q ss_pred CcceeeecchhhHHHHHHHHhcCc-c-cCCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDP-R-TCNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~-~-~~~~~~~i~~ 152 (191)
..+..+...+|+|++++.++.+. . ..++.+.+.|
T Consensus 220 -~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdg 255 (286)
T PRK07791 220 -EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEG 255 (286)
T ss_pred -ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcC
Confidence 11123467899999999988754 2 2367777764
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.86 E-value=1.1 Score=33.02 Aligned_cols=124 Identities=10% Similarity=0.024 Sum_probs=71.1
Q ss_pred CCCCCHHHHHHhhc----cCcEEEEccCCC---------C---------------cccHHHHHHH----HHHcCCccEEE
Q 038413 1 GELDEHEKIVSILK----EVDVVISTVAYP---------Q---------------FLDQLKIVHA----IKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~----g~d~V~~~~~~~---------~---------------~~~~~~li~a----a~~~g~vkr~v 48 (191)
+|+.|.+++.++++ ..|++||+++.. . +.+..+++++ +++.| ++|
T Consensus 51 ~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g---~Iv 127 (223)
T PRK05884 51 CDNTDPASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGG---SII 127 (223)
T ss_pred cCCCCHHHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---eEE
Confidence 58999999888775 579999997631 0 0111223333 22223 444
Q ss_pred -cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 -PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 -~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|+... .....|..+|..++.+.+. .|+....+.||++....... .. .
T Consensus 128 ~isS~~~--------~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~-----~~----------~- 183 (223)
T PRK05884 128 SVVPENP--------PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG-----LS----------R- 183 (223)
T ss_pred EEecCCC--------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh-----cc----------C-
Confidence 233220 1234577888888766543 47888889999865421100 00 0
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+.-..+|+++.+..++..+. . -++.+.+.|
T Consensus 184 -~p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdg 216 (223)
T PRK05884 184 -TPPPVAAEIARLALFLTTPAARHITGQTLHVSH 216 (223)
T ss_pred -CCCCCHHHHHHHHHHHcCchhhccCCcEEEeCC
Confidence 011267999999998877643 3 256666663
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.039 Score=43.34 Aligned_cols=44 Identities=18% Similarity=0.185 Sum_probs=35.1
Q ss_pred CHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~ 49 (191)
|+.++.++++|+|+|+++++... .+..+++++++++++ +++++.
T Consensus 66 d~~~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~ivi 122 (321)
T PTZ00325 66 DGELWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVG 122 (321)
T ss_pred CCCchHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEE
Confidence 43445678999999999998743 246789999999999 999763
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.6 Score=39.07 Aligned_cols=133 Identities=14% Similarity=0.104 Sum_probs=68.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC-----C----------------cccH----HHHHHHHHHcCCcc-EE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP-----Q----------------FLDQ----LKIVHAIKVAGNIK-RF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~-----~----------------~~~~----~~li~aa~~~g~vk-r~ 47 (191)
+|+.|++++.++++ +.|++||+++.. . +.+. +.++..+++.+ -. ++
T Consensus 58 ~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~~i 136 (520)
T PRK06484 58 MDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG-HGAAI 136 (520)
T ss_pred eccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCCeE
Confidence 48888888877764 479999998751 0 1122 33344443333 22 55
Q ss_pred E-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 L-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
| .|+....... .....|..+|..++.+.+. .++..+.++||++........... ............
T Consensus 137 v~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~ 210 (520)
T PRK06484 137 VNVASGAGLVAL----PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERA--GKLDPSAVRSRI 210 (520)
T ss_pred EEECCcccCCCC----CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhccc--chhhhHHHHhcC
Confidence 4 3432211111 1123567788888776542 478889999997755432211100 000000000000
Q ss_pred ceeeecchhhHHHHHHHHhcC
Q 038413 120 AKAVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~ 140 (191)
....+...+|+|+++..++.+
T Consensus 211 ~~~~~~~~~~va~~v~~l~~~ 231 (520)
T PRK06484 211 PLGRLGRPEEIAEAVFFLASD 231 (520)
T ss_pred CCCCCcCHHHHHHHHHHHhCc
Confidence 001245788999988887764
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.15 Score=38.42 Aligned_cols=136 Identities=11% Similarity=0.044 Sum_probs=69.1
Q ss_pred CCCCCHHHHHHhhcc-----------CcEEEEccCCCC-----c-----------------cc----HHHHHHHHHHc-C
Q 038413 1 GELDEHEKIVSILKE-----------VDVVISTVAYPQ-----F-----------------LD----QLKIVHAIKVA-G 42 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-----------~d~V~~~~~~~~-----~-----------------~~----~~~li~aa~~~-g 42 (191)
+|+.|.+++.++++. .|++||+++... . .+ ...++..+++. +
T Consensus 62 ~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~ 141 (256)
T TIGR01500 62 LDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPG 141 (256)
T ss_pred eccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCC
Confidence 488898888776642 158999887421 0 01 23344445443 2
Q ss_pred CccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEE
Q 038413 43 NIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV 114 (191)
Q Consensus 43 ~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~ 114 (191)
.-.+++. |+....... .....|..+|..++.+.+. .|+....+.||++....................
T Consensus 142 ~~~~iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~ 217 (256)
T TIGR01500 142 LNRTVVNISSLCAIQPF----KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKG 217 (256)
T ss_pred CCCEEEEECCHHhCCCC----CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHH
Confidence 0135553 442211110 1234577889888776653 467778888998765432211000000000000
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcC
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~ 140 (191)
.........+...+|+|+.++.++.+
T Consensus 218 ~~~~~~~~~~~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 218 LQELKAKGKLVDPKVSAQKLLSLLEK 243 (256)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHhc
Confidence 00000011256889999999999864
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.37 Score=36.43 Aligned_cols=141 Identities=11% Similarity=0.155 Sum_probs=74.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHH----HHHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHA----IKVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~a----a~~~g~vkr 46 (191)
+|+.|.+++.++++ ..|++++.++... ..+...++++ +++.| +
T Consensus 65 ~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G---~ 141 (260)
T PRK06603 65 LDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGG---S 141 (260)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCc---e
Confidence 48899888887763 4799999887421 0111222222 22223 4
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+.+..... .....|..+|..++.+.+. .|+....+.||.+.......... .. ........
T Consensus 142 Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~--~~-~~~~~~~~- 213 (260)
T PRK06603 142 IVTLTYYGAEKVI----PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD--FS-TMLKSHAA- 213 (260)
T ss_pred EEEEecCccccCC----CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC--cH-HHHHHHHh-
Confidence 44 3433221111 1123466788887766542 57888889999876542111000 00 00000000
Q ss_pred cce-eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 119 EAK-AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~-~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+ .-+...+|+|++++.++.++. . -++.+.+.|
T Consensus 214 ~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdg 250 (260)
T PRK06603 214 TAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDC 250 (260)
T ss_pred cCCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCC
Confidence 001 124678999999999987643 3 256667763
|
|
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.13 Score=41.04 Aligned_cols=80 Identities=13% Similarity=0.243 Sum_probs=56.0
Q ss_pred hccCcEEEEccCCCC------------c--ccHHHHHHHHH----HcCCccEEE-cCCcccCCCCCCCCCCchhhHHHHH
Q 038413 13 LKEVDVVISTVAYPQ------------F--LDQLKIVHAIK----VAGNIKRFL-PSEFGCEEDRVRPLPPFEAYLEKKR 73 (191)
Q Consensus 13 ~~g~d~V~~~~~~~~------------~--~~~~~li~aa~----~~g~vkr~v-~s~~g~~~~~~~~~~~~~~~~~~k~ 73 (191)
+.++..+|++.|... + +-...|+++.. ..+ .|++| .++++...- ....+|.+.|.
T Consensus 201 l~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~-~K~~vIvTSfn~~~~-----s~~f~Yfk~K~ 274 (410)
T PF08732_consen 201 LDDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTG-NKKLVIVTSFNNNAI-----SSMFPYFKTKG 274 (410)
T ss_pred hhhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCC-CceEEEEEecCcchh-----hhhhhhhHHHH
Confidence 446778888887642 2 23466777776 677 88866 467764321 23568999999
Q ss_pred HHHHHHHhc---CCC-eEEEecccccccc
Q 038413 74 IVRRAIEAV---EIP-YTFVSANCYGAYF 98 (191)
Q Consensus 74 ~~e~~l~~~---~~~-~tilrp~~~~~~~ 98 (191)
+.|+-|... .++ .+|||||+..|.-
T Consensus 275 ~LE~dl~~~l~~~l~~lvILRPGplvG~h 303 (410)
T PF08732_consen 275 ELENDLQNLLPPKLKHLVILRPGPLVGEH 303 (410)
T ss_pred HHHHHHHhhcccccceEEEecCccccCCC
Confidence 999999874 244 7899999988753
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.29 Score=34.97 Aligned_cols=87 Identities=14% Similarity=0.179 Sum_probs=47.8
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v~-s~~g 53 (191)
+|+.|++++.++++. .+.|||+++... +.+..+|.++..... ++.|+. ||..
T Consensus 60 ~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis 138 (181)
T PF08659_consen 60 CDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSIS 138 (181)
T ss_dssp --TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHH
T ss_pred cCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChh
Confidence 589999999988753 478999998642 245678888888877 888774 5421
Q ss_pred cCCCCCCCCCCc-hhhHHHHHHHHHHH---HhcCCCeEEEeccc
Q 038413 54 CEEDRVRPLPPF-EAYLEKKRIVRRAI---EAVEIPYTFVSANC 93 (191)
Q Consensus 54 ~~~~~~~~~~~~-~~~~~~k~~~e~~l---~~~~~~~tilrp~~ 93 (191)
.-.. .+. ..|..+..-++.+. +..|.+++.+.-+.
T Consensus 139 ~~~G-----~~gq~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~ 177 (181)
T PF08659_consen 139 SLLG-----GPGQSAYAAANAFLDALARQRRSRGLPAVSINWGA 177 (181)
T ss_dssp HHTT------TTBHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred Hhcc-----CcchHhHHHHHHHHHHHHHHHHhCCCCEEEEEccc
Confidence 1110 112 23434443333332 34688888887553
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.71 Score=34.80 Aligned_cols=81 Identities=11% Similarity=-0.042 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee--eecchhhHHHHHHHH
Q 038413 67 AYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA--VFNYEEDIAKCTIKV 137 (191)
Q Consensus 67 ~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~i~~~Dva~~~~~~ 137 (191)
.|..+|..+..+.+. .|+....+.||++.......+.. .. .....+. ...+. .+...+|+|+.++.+
T Consensus 157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~--~~-~~~~~~~-~~~p~~~~~~~p~evA~~v~~l 232 (256)
T PRK07889 157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPG--FE-LLEEGWD-ERAPLGWDVKDPTPVARAVVAL 232 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccC--cH-HHHHHHH-hcCccccccCCHHHHHHHHHHH
Confidence 456788887766542 57888889999876643221100 00 0000000 01111 356789999999999
Q ss_pred hcCcc-c-CCceeEee
Q 038413 138 INDPR-T-CNRIVIYR 151 (191)
Q Consensus 138 l~~~~-~-~~~~~~i~ 151 (191)
+.++. . -++.+.+.
T Consensus 233 ~s~~~~~~tG~~i~vd 248 (256)
T PRK07889 233 LSDWFPATTGEIVHVD 248 (256)
T ss_pred hCcccccccceEEEEc
Confidence 88643 2 35666665
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.46 E-value=2.4 Score=31.64 Aligned_cols=129 Identities=9% Similarity=0.083 Sum_probs=71.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------c-------------ccH----HHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------F-------------LDQ----LKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------~-------------~~~----~~li~aa~~~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ ..|+++++++... . .+. ..++..+++.+.-.++| .
T Consensus 56 ~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~i 135 (246)
T PRK05599 56 FDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAF 135 (246)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 48888888776642 4799999988632 0 011 12233344332012444 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|| .+.... .....|..+|..++.+.+. .|+....+.||++........ .. .+
T Consensus 136 sS~~~~~~~-----~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~-----~~----------~~ 195 (246)
T PRK05599 136 SSIAGWRAR-----RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM-----KP----------AP 195 (246)
T ss_pred eccccccCC-----cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC-----CC----------CC
Confidence 43 332111 1123466788877666542 467788889997665321110 00 00
Q ss_pred eeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 122 AVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
. ....+|+|+.++..+..+.. .+.+.+.
T Consensus 196 ~-~~~pe~~a~~~~~~~~~~~~-~~~~~~~ 223 (246)
T PRK05599 196 M-SVYPRDVAAAVVSAITSSKR-STTLWIP 223 (246)
T ss_pred C-CCCHHHHHHHHHHHHhcCCC-CceEEeC
Confidence 0 24689999999999987543 3445554
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.25 Score=39.80 Aligned_cols=44 Identities=20% Similarity=0.397 Sum_probs=36.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
.|+.|.+++.+++++.|+||+++++.. ..++++||.++| | +++.
T Consensus 54 vD~~d~~al~~li~~~d~VIn~~p~~~---~~~i~ka~i~~g-v-~yvD 97 (389)
T COG1748 54 VDAADVDALVALIKDFDLVINAAPPFV---DLTILKACIKTG-V-DYVD 97 (389)
T ss_pred ecccChHHHHHHHhcCCEEEEeCCchh---hHHHHHHHHHhC-C-CEEE
Confidence 388999999999999999999988642 358999999999 6 4553
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=92.56 E-value=3.1 Score=32.26 Aligned_cols=122 Identities=16% Similarity=0.109 Sum_probs=72.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCccEEE--
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIKRFL-- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vkr~v-- 48 (191)
+|++|.+++.+..+ .+|++++.||... +-.+++++-.|.+.. --|+|
T Consensus 93 cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~I 171 (300)
T KOG1201|consen 93 CDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTI 171 (300)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEe
Confidence 47888877765542 5899999999753 123466777777654 34666
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHH-------Hh---cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAI-------EA---VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l-------~~---~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
.|..|.-.. ....+|..+|.++.-+. ++ .|++.|.+.|+..-...+.. . . ..
T Consensus 172 aS~aG~~g~-----~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~------~------~-~~ 233 (300)
T KOG1201|consen 172 ASVAGLFGP-----AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG------A------T-PF 233 (300)
T ss_pred hhhhcccCC-----ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC------C------C-CC
Confidence 344443211 11345667777665443 33 35778888877544211111 0 0 11
Q ss_pred cceeeecchhhHHHHHHHHhcCc
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
....+.+..+-+|+-+++.+...
T Consensus 234 ~~l~P~L~p~~va~~Iv~ai~~n 256 (300)
T KOG1201|consen 234 PTLAPLLEPEYVAKRIVEAILTN 256 (300)
T ss_pred ccccCCCCHHHHHHHHHHHHHcC
Confidence 12357788999999999988754
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.16 E-value=1.4 Score=34.46 Aligned_cols=96 Identities=13% Similarity=0.158 Sum_probs=52.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------ccc----HHHHHHHHHHcCCccEEE-cC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLD----QLKIVHAIKVAGNIKRFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~----~~~li~aa~~~g~vkr~v-~s 50 (191)
+|+.|.+++.++++ ..|++||+++... ..+ +..++..+++.. .|+| .|
T Consensus 72 ~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~--~riv~vs 149 (313)
T PRK05854 72 LDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGR--ARVTSQS 149 (313)
T ss_pred ecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCC--CCeEEEe
Confidence 48888888877654 4799999998531 011 233344444443 3444 33
Q ss_pred CcccCC-----CC---CCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccc
Q 038413 51 EFGCEE-----DR---VRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYF 98 (191)
Q Consensus 51 ~~g~~~-----~~---~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~ 98 (191)
+..... .. .....+...|..+|.....+.++ .|+....+.||.....+
T Consensus 150 S~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 150 SIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred chhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 321100 00 00112334577888877665432 25777889999876543
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=91.59 E-value=1.9 Score=33.70 Aligned_cols=91 Identities=10% Similarity=0.140 Sum_probs=58.6
Q ss_pred CCCCHHHHHHhhc---------cCcEEEEccCCCC------------------------cccHHHHHHHHHHcCCccEEE
Q 038413 2 ELDEHEKIVSILK---------EVDVVISTVAYPQ------------------------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 2 D~~d~~~l~~a~~---------g~d~V~~~~~~~~------------------------~~~~~~li~aa~~~g~vkr~v 48 (191)
|+++++++.+|.+ |-..|++++|... +.-+++++-..+++. -|+|
T Consensus 84 DVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvV 161 (322)
T KOG1610|consen 84 DVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVV 161 (322)
T ss_pred ccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEE
Confidence 8889999888854 5678899988431 122455555555554 2555
Q ss_pred -c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEeccccccccc
Q 038413 49 -P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFV 99 (191)
Q Consensus 49 -~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~ 99 (191)
. |.-|.... +-..+|..+|.++|.+.. .-|++..++-||.|..+..
T Consensus 162 nvsS~~GR~~~-----p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~ 216 (322)
T KOG1610|consen 162 NVSSVLGRVAL-----PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLA 216 (322)
T ss_pred EecccccCccC-----cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccC
Confidence 3 33442110 113467789998887743 3599999999998877643
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=91.35 E-value=2.2 Score=32.11 Aligned_cols=145 Identities=10% Similarity=0.010 Sum_probs=74.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------------cccHHHHHHHHHH----cCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------------FLDQLKIVHAIKV----AGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------------~~~~~~li~aa~~----~g~vk 45 (191)
+|+.|.+++.++++ ..|++||+++... +.+...+++++.+ .+ -+
T Consensus 58 ~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~ 136 (262)
T TIGR03325 58 GDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GS 136 (262)
T ss_pred eccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CC
Confidence 47888887776664 4699999987421 1123445555543 22 12
Q ss_pred EEEcCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh----c--CCCeEEEecccccccccccccCCCCCCc---eEEEe
Q 038413 46 RFLPSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA----V--EIPYTFVSANCYGAYFVNVLLRPFEPHD---DVVVY 115 (191)
Q Consensus 46 r~v~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~----~--~~~~tilrp~~~~~~~~~~~~~~~~~~~---~~~~~ 115 (191)
.++.++ .+.. .. .....|..+|..++.+.+. . ++....+.||++......... ...... .....
T Consensus 137 iv~~sS~~~~~-~~----~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~-~~~~~~~~~~~~~~ 210 (262)
T TIGR03325 137 VIFTISNAGFY-PN----GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKS-LGMADKSISTVPLG 210 (262)
T ss_pred EEEEeccceec-CC----CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccc-cccccccccccchh
Confidence 333333 2221 11 1123577889888877653 1 356677889987654321100 000000 00000
Q ss_pred c--CCcce-eeecchhhHHHHHHHHhcCcc--c-CCceeEeec
Q 038413 116 G--NGEAK-AVFNYEEDIAKCTIKVINDPR--T-CNRIVIYRP 152 (191)
Q Consensus 116 ~--~g~~~-~~~i~~~Dva~~~~~~l~~~~--~-~~~~~~i~~ 152 (191)
. ....+ .-+...+|+|+++..++.++. . -++.+.+.|
T Consensus 211 ~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdg 253 (262)
T TIGR03325 211 DMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDG 253 (262)
T ss_pred hhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecC
Confidence 0 00001 124568999999888877632 2 356666663
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=91.22 E-value=5.4 Score=30.86 Aligned_cols=91 Identities=16% Similarity=0.196 Sum_probs=54.5
Q ss_pred CCCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|.+++.+++ .++|++++.+|... + -.++.++--+++.+ =-|+| .
T Consensus 70 ~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvi 148 (282)
T KOG1205|consen 70 LDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVI 148 (282)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEE
Confidence 5899999988664 47999999998753 1 11344555555553 22555 3
Q ss_pred CC-cccCCCCCCCCCCch-hhHHHHHHHHHHHHh-------cCCCeE-EEecccccccc
Q 038413 50 SE-FGCEEDRVRPLPPFE-AYLEKKRIVRRAIEA-------VEIPYT-FVSANCYGAYF 98 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~-~~~~~k~~~e~~l~~-------~~~~~t-ilrp~~~~~~~ 98 (191)
|| -|... .|.. -|.++|.+++.+.+. .+.... ++.||+....+
T Consensus 149 sSiaG~~~------~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~ 201 (282)
T KOG1205|consen 149 SSIAGKMP------LPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEF 201 (282)
T ss_pred eccccccC------CCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecc
Confidence 33 33221 2332 567899999887653 122222 47788776654
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.09 E-value=3.8 Score=30.35 Aligned_cols=90 Identities=10% Similarity=0.048 Sum_probs=50.6
Q ss_pred CCCCCHHHHHHhh-------c-cCcEEEEccCCCC----c----------------cc----HHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSIL-------K-EVDVVISTVAYPQ----F----------------LD----QLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~-g~d~V~~~~~~~~----~----------------~~----~~~li~aa~~~g~vkr~v 48 (191)
.|+.|.+++.+++ . ..|++||+++... . .. .+.++..+++.+.-..+|
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv 140 (227)
T PRK08862 61 LKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIV 140 (227)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEE
Confidence 3778888877654 2 5799999986321 0 01 122234444432012444
Q ss_pred -cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccc
Q 038413 49 -PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAY 97 (191)
Q Consensus 49 -~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~ 97 (191)
.|+.... .+...|..+|..++.+.+. .++....+.||++..+
T Consensus 141 ~isS~~~~-------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 141 NVISHDDH-------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred EEecCCCC-------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 2432211 1133567788887766543 4788888999986654
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=89.99 E-value=0.41 Score=37.75 Aligned_cols=44 Identities=16% Similarity=0.158 Sum_probs=34.8
Q ss_pred CHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc
Q 038413 5 EHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 5 d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~ 49 (191)
+.+++.++++|+|+|+++++... .+..+++++++++.+ .+.++.
T Consensus 76 ~~~d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivi 132 (323)
T PLN00106 76 GDDQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVN 132 (323)
T ss_pred CCCCHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEE
Confidence 34456789999999999998643 355788999999999 888663
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.60 E-value=0.59 Score=37.11 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=33.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAG 42 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g 42 (191)
+|.+|+++|.+-.+.+.+|++|+|+...- ..++++||.++|
T Consensus 69 ~D~~n~~Sl~emak~~~vivN~vGPyR~h-GE~VVkacienG 109 (423)
T KOG2733|consen 69 ADSANEASLDEMAKQARVIVNCVGPYRFH-GEPVVKACIENG 109 (423)
T ss_pred ecCCCHHHHHHHHhhhEEEEeccccceec-CcHHHHHHHHcC
Confidence 48899999999999999999999976422 256777777777
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=87.92 E-value=6.4 Score=30.91 Aligned_cols=59 Identities=7% Similarity=0.095 Sum_probs=39.0
Q ss_pred hhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 66 EAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
..|..+|..++.+.+. .|+..+.++||+...+.... .. . .....+.+++|+.++..+
T Consensus 206 ~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~------~~--------~--~~~~~~p~~~A~~~~~~~ 269 (320)
T PLN02780 206 AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI------RR--------S--SFLVPSSDGYARAALRWV 269 (320)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc------cC--------C--CCCCCCHHHHHHHHHHHh
Confidence 4577889888776543 58899999999865542110 00 0 111347899999999988
Q ss_pred cC
Q 038413 139 ND 140 (191)
Q Consensus 139 ~~ 140 (191)
..
T Consensus 270 ~~ 271 (320)
T PLN02780 270 GY 271 (320)
T ss_pred CC
Confidence 64
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=87.62 E-value=1.3 Score=31.67 Aligned_cols=44 Identities=7% Similarity=0.100 Sum_probs=34.1
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCCcccHHHHHHHHHHcCCcc----EEE
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQFLDQLKIVHAIKVAGNIK----RFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~~~~~~~li~aa~~~g~vk----r~v 48 (191)
+|+.|.+++.+++++ .|.+|+.+. .++..++..+|++.| |+ ||+
T Consensus 54 ~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh---~~~~~~~~~~~~~~g-v~~~~~~~~ 108 (177)
T PRK08309 54 LDYHDDDALKLAIKSTIEKNGPFDLAVAWIH---SSAKDALSVVCRELD-GSSETYRLF 108 (177)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCeEEEEecc---ccchhhHHHHHHHHc-cCCCCceEE
Confidence 489999988887753 467776544 356788999999999 99 877
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=87.23 E-value=4.7 Score=40.61 Aligned_cols=90 Identities=11% Similarity=0.116 Sum_probs=57.6
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEEc-CC-cc
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFLP-SE-FG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v~-s~-~g 53 (191)
+|++|.+++.+++. +.|.|||.+|... +.+..++++++.... .+++|. || .|
T Consensus 2101 ~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~-~~~IV~~SSvag 2179 (2582)
T TIGR02813 2101 ADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAEN-IKLLALFSSAAG 2179 (2582)
T ss_pred ccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhh
Confidence 58999998887774 4799999998632 355678888888776 677663 44 23
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEecccccc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGA 96 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~ 96 (191)
... . .....|..+|.....+.+. .++....+.||++.+
T Consensus 2180 ~~G-~----~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2180 FYG-N----TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred cCC-C----CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence 211 1 1123466777666544332 246677788876543
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=85.63 E-value=1.2 Score=33.93 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=37.3
Q ss_pred CCCCHHHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEE
Q 038413 2 ELDEHEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 2 D~~d~~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~ 47 (191)
+..|.+++.+.++ +.|+|++++.+.......|+.+||++.| +..+
T Consensus 50 g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~is~~a~~a~~~~~-ipyl 96 (256)
T TIGR00715 50 GALDPQELREFLKRHSIDILVDATHPFAAQITTNATAVCKELG-IPYV 96 (256)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCCHHHHHHHHHHHHHHHHhC-CcEE
Confidence 4467788887775 6899999998877788899999999999 8654
|
This enzyme was found to be a monomer by gel filtration. |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=84.25 E-value=4.7 Score=25.58 Aligned_cols=40 Identities=28% Similarity=0.312 Sum_probs=33.4
Q ss_pred HHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 8 KIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.+.+.++.+|.||...+..+-.....+-++|++.+ ++-+.
T Consensus 41 ~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~-ip~~~ 80 (97)
T PF10087_consen 41 RLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYG-IPIIY 80 (97)
T ss_pred HHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcC-CcEEE
Confidence 47888889999999999888788889999999999 64433
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=82.85 E-value=11 Score=25.86 Aligned_cols=76 Identities=17% Similarity=0.308 Sum_probs=43.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEE-cCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFL-PSEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v-~s~~g 53 (191)
.|+.+.+++.++++ ..|++||+++... ......+.+++...+ -.++| .|+..
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~ 137 (167)
T PF00106_consen 59 CDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIA 137 (167)
T ss_dssp SETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGG
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchh
Confidence 47788877776653 5799999998753 122344555555533 34544 34432
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA 81 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~ 81 (191)
..... .....|..+|..++.+.+.
T Consensus 138 ~~~~~----~~~~~Y~askaal~~~~~~ 161 (167)
T PF00106_consen 138 GVRGS----PGMSAYSASKAALRGLTQS 161 (167)
T ss_dssp GTSSS----TTBHHHHHHHHHHHHHHHH
T ss_pred hccCC----CCChhHHHHHHHHHHHHHH
Confidence 22111 1133566788888877653
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=82.01 E-value=2.6 Score=38.58 Aligned_cols=25 Identities=28% Similarity=0.519 Sum_probs=22.3
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCC
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYP 26 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~ 26 (191)
|+.|.++|.++++++|+|+++++..
T Consensus 635 Dv~D~e~L~~~v~~~DaVIsalP~~ 659 (1042)
T PLN02819 635 DVSDSESLLKYVSQVDVVISLLPAS 659 (1042)
T ss_pred ecCCHHHHHHhhcCCCEEEECCCch
Confidence 7889999999999999999998863
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=81.89 E-value=20 Score=27.92 Aligned_cols=138 Identities=7% Similarity=-0.030 Sum_probs=69.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEcc-CCC------C-----------------ccc----HHHHHHHHHHcCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTV-AYP------Q-----------------FLD----QLKIVHAIKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~-~~~------~-----------------~~~----~~~li~aa~~~g~vk 45 (191)
+|+.|.+++.++++ ..|++||++ +.. . +.+ .+.++..+++.+ --
T Consensus 74 ~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g 152 (305)
T PRK08303 74 VDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GG 152 (305)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-Cc
Confidence 48888888876653 479999998 521 1 001 223344444433 23
Q ss_pred EEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 46 RFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 46 r~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
++| .|+......... ......|..+|..+..+.+. .|+....+.||++............ +.........
T Consensus 153 ~IV~isS~~~~~~~~~-~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~ 230 (305)
T PRK08303 153 LVVEITDGTAEYNATH-YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVT-EENWRDALAK 230 (305)
T ss_pred EEEEECCccccccCcC-CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccC-ccchhhhhcc
Confidence 554 233211111000 01123477788887766542 4788888999987654321110000 0000000000
Q ss_pred CcceeeecchhhHHHHHHHHhcCc
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
.....-+...+|+|.+++.++.++
T Consensus 231 ~p~~~~~~~peevA~~v~fL~s~~ 254 (305)
T PRK08303 231 EPHFAISETPRYVGRAVAALAADP 254 (305)
T ss_pred ccccccCCCHHHHHHHHHHHHcCc
Confidence 000011236899999999998876
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=81.33 E-value=3.5 Score=31.23 Aligned_cols=44 Identities=18% Similarity=0.205 Sum_probs=37.5
Q ss_pred CCCHHHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEE
Q 038413 3 LDEHEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 3 ~~d~~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~ 47 (191)
+.|.+.+.+.++ ++++|+++..+.......|+.+||++.| +..+
T Consensus 51 l~~~~~l~~~l~~~~i~~VIDATHPfA~~is~~a~~ac~~~~-ipyi 96 (248)
T PRK08057 51 FGGAEGLAAYLREEGIDLVIDATHPYAAQISANAAAACRALG-IPYL 96 (248)
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCccHHHHHHHHHHHHHHhC-CcEE
Confidence 347888888885 7899999988877888899999999999 8654
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=80.94 E-value=3.2 Score=31.49 Aligned_cols=44 Identities=18% Similarity=0.201 Sum_probs=37.2
Q ss_pred CCHHHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE
Q 038413 4 DEHEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 4 ~d~~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v 48 (191)
.|.+.+.+-++ +++.|+++..+.......|+.+||++.| +..+=
T Consensus 53 g~~~~l~~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~-ipylR 98 (249)
T PF02571_consen 53 GDEEGLAEFLRENGIDAVIDATHPFAAEISQNAIEACRELG-IPYLR 98 (249)
T ss_pred CCHHHHHHHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcC-cceEE
Confidence 47888888884 8999999988877788899999999999 86543
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.86 E-value=20 Score=26.43 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=37.9
Q ss_pred HHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccC--CceeEeec
Q 038413 76 RRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTC--NRIVIYRP 152 (191)
Q Consensus 76 e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--~~~~~i~~ 152 (191)
.+.+...++..-.+.||++..+..... .+...++.....+-| -+-..+|||..+.-+..+...+ +..+.+.|
T Consensus 179 ArEla~knIrvN~VlPGFI~tpMT~~m-p~~v~~ki~~~iPmg----r~G~~EevA~~V~fLAS~~ssYiTG~t~evtG 252 (256)
T KOG1200|consen 179 ARELARKNIRVNVVLPGFIATPMTEAM-PPKVLDKILGMIPMG----RLGEAEEVANLVLFLASDASSYITGTTLEVTG 252 (256)
T ss_pred HHHHhhcCceEeEeccccccChhhhhc-CHHHHHHHHccCCcc----ccCCHHHHHHHHHHHhccccccccceeEEEec
Confidence 344555789999999998776532221 111111111111111 1224678888777766543322 66777764
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=80.54 E-value=22 Score=27.73 Aligned_cols=25 Identities=12% Similarity=0.296 Sum_probs=19.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAY 25 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~ 25 (191)
+|+.|.+++.++++ +.|++||+++.
T Consensus 60 ~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~ 91 (314)
T TIGR01289 60 LDLGSLDSVRQFVQQFRESGRPLDALVCNAAV 91 (314)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 48888888776653 48999999885
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=80.35 E-value=22 Score=27.62 Aligned_cols=25 Identities=16% Similarity=0.321 Sum_probs=19.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAY 25 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~ 25 (191)
.|+.|.+++.++++ +.|++||+++.
T Consensus 54 ~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~ 85 (308)
T PLN00015 54 LDLASLDSVRQFVDNFRRSGRPLDVLVCNAAV 85 (308)
T ss_pred ecCCCHHHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 48888888877653 47999999985
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=80.06 E-value=2.8 Score=32.87 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=32.6
Q ss_pred HHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEE
Q 038413 7 EKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v 48 (191)
+++.++++++|+||.++|... ....+++++++++.+ .++++
T Consensus 61 ~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~iv 114 (312)
T PRK05086 61 EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACI 114 (312)
T ss_pred CCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEE
Confidence 455678899999999998743 235688999999998 88866
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 191 | ||||
| 3c1o_A | 321 | The Multiple Phenylpropene Synthases In Both Clarki | 2e-76 | ||
| 2qx7_A | 318 | Structure Of Eugenol Synthase From Ocimum Basilicum | 1e-70 | ||
| 2qw8_A | 314 | Structure Of Eugenol Synthase From Ocimum Basilicum | 1e-70 | ||
| 3c3x_A | 318 | The Multiple Phenylpropene Synthases In Both Clarki | 2e-70 | ||
| 2r2g_A | 318 | Structure Of Eugenol Synthase From Ocimum Basilicum | 3e-70 | ||
| 1qyc_A | 308 | Crystal Structures Of Pinoresinol-Lariciresinol And | 2e-43 | ||
| 1qyd_A | 313 | Crystal Structures Of Pinoresinol-Lariciresinol And | 4e-41 | ||
| 2gas_A | 307 | Crystal Structure Of Isoflavone Reductase Length = | 7e-37 | ||
| 3i52_A | 346 | Ternary Complex Structure Of Leucoanthocyanidin Red | 5e-34 |
| >pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321 | Back alignment and structure |
|
| >pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318 | Back alignment and structure |
|
| >pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314 | Back alignment and structure |
|
| >pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318 | Back alignment and structure |
|
| >pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318 | Back alignment and structure |
|
| >pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308 | Back alignment and structure |
|
| >pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313 | Back alignment and structure |
|
| >pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307 | Back alignment and structure |
|
| >pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 191 | |||
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 8e-64 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 2e-61 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 3e-59 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 4e-59 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 4e-54 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 5e-54 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 1e-10 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 6e-08 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 2e-07 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 2e-07 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 2e-07 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 1e-06 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 2e-06 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 3e-06 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 1e-04 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 3e-04 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 9e-04 |
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 198 bits (505), Expect = 8e-64
Identities = 124/189 (65%), Positives = 156/189 (82%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GELDEHEK+V ++K+VDVVIS +A+PQ LDQ KI+ AIKVAGNIKRFLPS+FG EEDR+
Sbjct: 65 GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 124
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120
LPPFEA +E+KR++RRAIE IPYT+VSANC+ +YF+N LLRP++P D++ VYG GEA
Sbjct: 125 ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEA 184
Query: 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180
K NYE+DI TIKV DPR NR+VIYRP TNII+QLELIS WE+K G+ FK++H+
Sbjct: 185 KFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP 244
Query: 181 EEELVKLSQ 189
EEE+V L++
Sbjct: 245 EEEIVALTK 253
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 2e-61
Identities = 131/192 (68%), Positives = 159/192 (82%), Gaps = 3/192 (1%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
GE++EHEK+VS+LK+VD+VIS + +P Q+ I++AIK AGNIKRFLPS+FGCEEDR++
Sbjct: 63 GEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIK 122
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE---PHDDVVVYGN 117
PLPPFE+ LEKKRI+RRAIEA +PYT+VSANC+GAYFVN LL P +DD+V+YG
Sbjct: 123 PLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGT 182
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
GE K V NYEEDIAK TIKV DPR CNRIVIYRP NIISQ ELISLWE K+G SFK+V
Sbjct: 183 GETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKV 242
Query: 178 HISEEELVKLSQ 189
H+ +E+LV+LSQ
Sbjct: 243 HMPDEQLVRLSQ 254
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 186 bits (473), Expect = 3e-59
Identities = 74/192 (38%), Positives = 117/192 (60%), Gaps = 3/192 (1%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G++++HE +V +K+VD+VI DQ+KI+ AIK AGN+K+F PSEFG + DR
Sbjct: 62 GDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHD 121
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE---PHDDVVVYGN 117
+ P E+K +RR IEA +PYT++ + + YF+ L + P D VV+ G+
Sbjct: 122 AVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGD 181
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
G K + E D+ TI+ NDP T N+ V R N ++Q E+I+LWE+K G++ ++
Sbjct: 182 GNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKT 241
Query: 178 HISEEELVKLSQ 189
++SEE+++K Q
Sbjct: 242 YVSEEQVLKDIQ 253
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 186 bits (473), Expect = 4e-59
Identities = 86/192 (44%), Positives = 121/192 (63%), Gaps = 3/192 (1%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G +D+H +V +K VDVVISTV Q Q+ I+ AIK G +KRF PSEFG + D V
Sbjct: 63 GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVH 122
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE---PHDDVVVYGN 117
+ P ++ E K VRRAIEA IPYT+VS+NC+ YF+ L + P D VV+ G+
Sbjct: 123 AVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGD 182
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
G A+ VF EEDI TIK ++DPRT N+ + R N +S EL++LWE+K ++ ++
Sbjct: 183 GNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKA 242
Query: 178 HISEEELVKLSQ 189
++ EEE++KL
Sbjct: 243 YVPEEEVLKLIA 254
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 4e-54
Identities = 85/198 (42%), Positives = 124/198 (62%), Gaps = 9/198 (4%)
Query: 1 GELDEHEKIVSILKEVDVVISTVA----YPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEE 56
LD+H+++V LK+VDVVIS +A L+QLK+V AIK AGNIKRFLPSEFG +
Sbjct: 62 ASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP 121
Query: 57 DRV-RPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPF----EPHDD 111
D + L P KR VRRAIEA IPYT+VS+N + YF L + P D
Sbjct: 122 DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDK 181
Query: 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171
V++YG+G K ++ E+D+ TIK I+DP+T N+ + RP NI+SQ E+I +WE+ +
Sbjct: 182 VLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE 241
Query: 172 RSFKRVHISEEELVKLSQ 189
++ +++IS ++ + +
Sbjct: 242 QNLDKIYISSQDFLADMK 259
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 5e-54
Identities = 76/194 (39%), Positives = 115/194 (59%), Gaps = 5/194 (2%)
Query: 1 GELDEHEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDR 58
G ++E E + ILK E+D+V+STV LDQ+ +V A+K G IKRFLPSEFG + +R
Sbjct: 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNR 126
Query: 59 VRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE---PHDDVVVY 115
P+ P +KR VR+ +E IP+T++ N ++ + P E P D +Y
Sbjct: 127 ADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIY 186
Query: 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK 175
G+G KA F DI K T+K ++D RT N+ V +RP N ++ EL S+WE+K GR+
Sbjct: 187 GDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLP 246
Query: 176 RVHISEEELVKLSQ 189
RV ++E++L+ +
Sbjct: 247 RVTVTEDDLLAAAG 260
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-10
Identities = 18/155 (11%), Positives = 43/155 (27%), Gaps = 19/155 (12%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLK--------IVHAIKVAGNIKRFLP-SE 51
G++ + + + D VI + L IV A+K G + + + +
Sbjct: 53 GDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTS 111
Query: 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDD 111
D + P +A + + + + + Y V
Sbjct: 112 AFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMP---PHIGDQ------PLTGA 162
Query: 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNR 146
V +G + + D+ ++ +
Sbjct: 163 YTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGH 197
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 6e-08
Identities = 31/179 (17%), Positives = 57/179 (31%), Gaps = 34/179 (18%)
Query: 4 DEHEKIVSILKEVDVVISTV--------AYPQFLD---QLKIVHAIKVAGNIKRF-LPSE 51
+ E +D V+ +D +K + + G IKRF + S
Sbjct: 73 NLEEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSS 131
Query: 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRP-----F 106
G + P+ YL KR+ ++ + YT ++RP
Sbjct: 132 VGTVDPDQGPMN-MRHYLVAKRLADDELKRSSLDYT--------------IVRPGPLSNE 176
Query: 107 EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIV-IYRPQTNIISQLELIS 164
E V V + D+AK ++++ T + + T I +E +
Sbjct: 177 ESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIAKVVEQLG 235
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-07
Identities = 42/194 (21%), Positives = 69/194 (35%), Gaps = 20/194 (10%)
Query: 1 GELDEHEKIVSILKEVDVV--ISTVAYPQF--LDQLK-IVHAIKVAGNIKRFLPSEFGCE 55
G+ ++ E + V + IS Y + Q +V A + AG +K + +
Sbjct: 52 GDYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYAFA 110
Query: 56 EDRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY 115
E+ + PL E AI IPYTF+ Y +FVN LR +V
Sbjct: 111 EESIIPLAHVHLATE------YAIRTTNIPYTFLRNALYTDFFVNEGLRAS-TESGAIVT 163
Query: 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYR---PQTNIISQLELISLWEQKTGR 172
G ++A V+ + N+ Y Q + EL + + +G+
Sbjct: 164 NAGSGIVNSVTRNELALAAATVLTEEGHENKT--YNLVSNQP--WTFDELAQILSEVSGK 219
Query: 173 SFKRVHISEEELVK 186
+S EE
Sbjct: 220 KVVHQPVSFEEEKN 233
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-07
Identities = 28/198 (14%), Positives = 60/198 (30%), Gaps = 16/198 (8%)
Query: 1 GELDEHEKIVSILKEVDVVIS------TVAYPQFLDQLK-IVHAIKVAGNIKRFLPSEFG 53
G+ D+ + L + + Q + Q K + + G + + S
Sbjct: 58 GDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLE 116
Query: 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV 113
++ A+ + K V + +P T V CY ++ L P
Sbjct: 117 -NIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSY 175
Query: 114 VYGNGEAKAVFNY--EEDIAKCTIKVINDPRTCN--RIVIYRPQTNIISQLELISLWEQK 169
+ + D+ + ++ P I + T + E +L +
Sbjct: 176 LLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLS---TCRHTAEEYAALLTKH 232
Query: 170 TGRSFKRVHISEEELVKL 187
T + ++ E+ KL
Sbjct: 233 TRKVVHDAKMTPEDYEKL 250
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-07
Identities = 37/192 (19%), Positives = 76/192 (39%), Gaps = 17/192 (8%)
Query: 1 GELDEHEKIVSILKEVDVV--ISTVAYPQF--LDQLK-IVHAIKVAGNIKRF-LPSEFGC 54
+ E +V K +D V I ++ +P F + +++ +V+A K +G + +
Sbjct: 51 LDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYAD 109
Query: 55 EEDRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV 114
+ + + P+ Y R + I YT+V Y L P + ++
Sbjct: 110 QHNNPFHMSPYFGYAS------RLLSTSGIDYTYVRMAMYMDPLKPYL--PELMNMHKLI 161
Query: 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174
Y G+ + + DIA+ I +I +P T + + + EL ++ + +G
Sbjct: 162 YPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYS--YDMKELAAILSEASGTEI 219
Query: 175 KRVHISEEELVK 186
K +S E +
Sbjct: 220 KYEPVSLETFAE 231
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 1e-06
Identities = 34/205 (16%), Positives = 66/205 (32%), Gaps = 40/205 (19%)
Query: 1 GELDEHEKIVSILKEVDVVISTVA-------------------------YPQFLD---QL 32
G++ + + I + +D ++ + YP+ +D Q
Sbjct: 55 GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 114
Query: 33 KIVHAIKVAGNIKRF-LPSEFGCEEDRVRPLPPFE--AYLEKKRIVRRAIEAVEIPYTFV 89
+ A KVAG +K + G + PL L KR + + PYT +
Sbjct: 115 NQIDAAKVAG-VKHIVVVGSMGGT-NPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTII 172
Query: 90 SANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRI-- 147
A V D+++ D+A+ I+ + N+
Sbjct: 173 RAGGLLDKEGGVRELLVGKDDELLQTDTKTV-----PRADVAEVCIQALLFEEAKNKAFD 227
Query: 148 VIYRPQTNIISQLELISLWEQKTGR 172
+ +P+ + +L+ Q T R
Sbjct: 228 LGSKPEGTSTPTKDFKALFSQVTSR 252
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-06
Identities = 33/193 (17%), Positives = 71/193 (36%), Gaps = 21/193 (10%)
Query: 1 GELDEHEKIVSILKEVDVV--ISTVAYPQFLDQLK-IVHAIKVAGNIKR-FLPSEFGCEE 56
+ + + S L+ V+ + IS+ Q Q + +++A K AG +K S +
Sbjct: 51 ADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLHADT 109
Query: 57 DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG 116
PL + ++E + + I YT + Y ++ P V +
Sbjct: 110 ---SPLGLADEHIE----TEKMLADSGIVYTLLRNGWYSENYLASA--PAALEHGVFIGA 160
Query: 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYR---PQTNIISQLELISLWEQKTGRS 173
G+ K D A +VI++ ++ Y + +L + +++G+
Sbjct: 161 AGDGKIASATRADYAAAAARVISEAGHEGKV--YELAGDSA--WTLTQLAAELTKQSGKQ 216
Query: 174 FKRVHISEEELVK 186
++SE +
Sbjct: 217 VTYQNLSEADFAA 229
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 3e-06
Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 19/164 (11%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLK-IVHAIKVAGNIKRFLP-SEFGCEEDR 58
G++ H + ++ D+V + + Q ++ A+K +KR + G ++
Sbjct: 74 GDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACD-VKRLIFVLSLGIYDEV 132
Query: 59 VRPLPP-----FEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV 113
L+ R AIEA + YT + + D +
Sbjct: 133 PGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRP---AWLTDE------DIIDYEL 183
Query: 114 VYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNR--IVIYRPQTN 155
N K + +A +I+ P I I +P T+
Sbjct: 184 TSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGTD 227
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 1e-04
Identities = 22/156 (14%), Positives = 53/156 (33%), Gaps = 29/156 (18%)
Query: 7 EKIVSILKEVDVVISTV----AYPQFLD---QLKIVHAIKVAGNIKRFLP-SEFGCEEDR 58
E++ L +D +I+ +D +K++ A + A +KRF+ S +
Sbjct: 55 EEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPE 113
Query: 59 VRPLPPFEA---YLEKKRIVRRAI-EAVEIPYTFVSANCYGAYFVNVLLRP--FEPHDDV 112
F+A Y K + + + YT + +P +
Sbjct: 114 KWIGAGFDALKDYYIAKHFADLYLTKETNLDYTII--------------QPGALTEEEAT 159
Query: 113 VVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIV 148
+ + + N D+A +++ + +++
Sbjct: 160 GLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVI 195
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 38.8 bits (90), Expect = 3e-04
Identities = 19/147 (12%), Positives = 41/147 (27%), Gaps = 15/147 (10%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEED--- 57
G + + +VV D IV A+ + S G +
Sbjct: 59 GSFQNPGXLEQAVTNAEVVFVGAM-ESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPV 117
Query: 58 ---RVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV 114
+ +Y++ +R R + + YT + + N E D ++
Sbjct: 118 ALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRL----TWLYN----DPEXTDYELI 169
Query: 115 YGNGEAKAVFNYEEDIAKCTIKVINDP 141
+ E + K +++
Sbjct: 170 PEGAQFNDAQVSREAVVKAIFDILHAA 196
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 38.3 bits (89), Expect = 9e-04
Identities = 27/198 (13%), Positives = 63/198 (31%), Gaps = 22/198 (11%)
Query: 4 DEHEKIVSILKEVDVV--ISTVAYPQFLDQLK-IVHAIKVAGNIKRFLPSEFGCEE--DR 58
+ + ++ + + +T + K + A K AG I+ ++ S
Sbjct: 62 NNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP 121
Query: 59 VRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVL------LRPFEPHDDV 112
+P + K V + + +P TFV A G Y N + D
Sbjct: 122 WPAVPMWAP----KFTVENYVRQLGLPSTFVYA---GIYNNNFTSLPYPLFQMELMPDGT 174
Query: 113 VVY---GNGEAK-AVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQ 168
+ + + + E D+ +++ D +S +++ + + +
Sbjct: 175 FEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSR 234
Query: 169 KTGRSFKRVHISEEELVK 186
R V + + E+
Sbjct: 235 ALNRRVTYVQVPKVEIKV 252
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 191 | |||
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 100.0 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.97 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.97 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.97 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.97 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.97 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.93 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.93 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.93 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.92 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.9 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.9 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.89 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.88 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.88 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.87 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.87 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.86 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.86 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.86 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.86 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.86 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.86 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.85 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.85 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.85 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.85 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.85 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.84 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.84 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.84 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.84 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.84 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.83 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.83 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.83 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.83 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.83 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.82 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.82 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.82 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.82 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.82 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.82 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.81 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.81 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.81 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.81 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.81 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.8 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.8 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.8 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.79 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.79 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.78 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.78 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.78 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.78 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.77 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.77 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.77 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.77 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.76 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.76 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.76 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.75 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.75 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.74 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.74 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.73 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.73 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.73 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.72 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.71 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.71 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.71 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.69 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.69 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.68 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.67 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.66 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.64 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.63 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.62 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.62 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.6 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.58 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.52 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.46 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.23 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.18 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.08 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 98.97 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.97 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 98.88 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 98.88 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 98.83 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.81 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 98.8 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.78 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.77 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.77 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.76 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 98.75 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.75 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 98.75 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 98.73 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.73 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.71 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 98.71 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.7 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.7 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 98.69 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.69 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.68 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.67 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.67 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 98.66 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.66 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.65 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.64 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 98.64 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.64 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 98.63 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.63 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.63 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 98.61 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.6 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.6 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 98.58 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 98.58 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.58 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.57 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.57 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.54 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.53 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.53 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.52 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 98.52 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.52 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.49 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.49 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.49 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.49 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.48 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.48 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.48 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.48 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.48 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.47 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.47 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.47 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.46 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 98.46 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 98.46 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.45 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.45 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.44 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.43 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.43 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.43 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 98.43 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 98.42 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.42 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 98.42 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.42 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.42 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.41 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.4 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.39 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.39 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.39 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.39 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.39 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.38 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.37 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.37 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.35 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 98.34 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.34 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.33 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.33 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 98.33 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.32 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.32 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.31 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.31 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.31 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.29 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.29 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 98.28 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.28 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.28 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.27 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.26 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.26 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.25 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.24 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.24 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.23 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.22 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.22 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.21 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.21 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 98.2 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.2 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.2 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.19 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.18 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.18 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.18 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.18 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.17 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.17 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 98.17 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.16 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 98.15 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.15 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.15 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.15 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.15 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.14 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 98.14 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.12 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.11 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.1 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 98.09 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.09 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.08 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.08 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.08 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 98.08 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.07 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.07 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.07 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.06 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.05 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.04 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.04 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.03 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.03 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.02 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 97.99 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 97.99 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 97.97 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.97 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 97.95 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 97.95 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.95 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 97.94 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 97.92 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 97.91 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 97.9 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.88 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 97.87 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 97.87 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 97.86 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 97.86 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 97.85 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 97.82 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 97.8 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.79 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 97.75 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 97.73 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 97.73 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 97.7 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 97.68 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 97.68 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 97.64 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.63 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 97.6 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 97.58 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 97.52 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 97.51 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 97.47 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 97.41 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 97.39 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.39 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 97.23 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 97.2 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 97.1 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 97.09 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 96.97 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 96.97 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 96.96 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 96.91 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 96.91 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 96.87 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 96.79 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 96.73 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 96.63 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 96.26 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 95.94 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 95.87 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 95.85 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 95.62 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 95.53 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 94.99 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 94.35 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 93.72 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 93.45 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 91.71 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 91.62 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 91.16 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 90.99 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 90.76 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 90.32 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 88.11 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 87.84 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 87.6 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 87.26 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 87.25 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 85.81 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 85.76 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 82.96 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 82.66 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 82.02 | |
| 3m6y_A | 275 | 4-hydroxy-2-oxoglutarate aldolase; structural geno | 80.35 |
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-31 Score=207.94 Aligned_cols=190 Identities=39% Similarity=0.660 Sum_probs=165.4
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHHHHHHHHHH
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRRA 78 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~ 78 (191)
||+.|.+++.++++ ++|+|||+++..+..++.+++++|+++|+++||++|+||...++.....|..+|..+|..+|++
T Consensus 67 ~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e~~~~~p~~~y~~sK~~~e~~ 146 (346)
T 3i6i_A 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQL 146 (346)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSSCTTTCCCCTTHHHHHHHHHHHHHH
T ss_pred eecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeecccCCCCCccCcCCCcchHHHHHHHHHHH
Confidence 69999999999999 9999999999988999999999999998799999999987654443345677889999999999
Q ss_pred HHhcCCCeEEEecccccccccccccCCC---CCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCC
Q 038413 79 IEAVEIPYTFVSANCYGAYFVNVLLRPF---EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTN 155 (191)
Q Consensus 79 l~~~~~~~tilrp~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~ 155 (191)
++++|++||++|||.|++++.+.+.... ...+.+.++++|+.++++++++|+|++++.++.+++..++.++++++++
T Consensus 147 l~~~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~ 226 (346)
T 3i6i_A 147 VEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCN 226 (346)
T ss_dssp HHHTTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGG
T ss_pred HHHcCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCC
Confidence 9999999999999999998766544321 2556788999999999999999999999999999887789999974358
Q ss_pred ccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 156 IISQLELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 156 ~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
.+|+.|+++++++++|+++++..+|.+++.+.+++
T Consensus 227 ~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 261 (346)
T 3i6i_A 227 CLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGE 261 (346)
T ss_dssp EECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhc
Confidence 99999999999999999999999999999887753
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=193.94 Aligned_cols=190 Identities=39% Similarity=0.684 Sum_probs=158.9
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHHHHHHHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE 80 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~ 80 (191)
+|+.|++++.++++++|+|||+++......+.+++++|+++|+|+|||+|+||...++.....|....|.+|..+|++++
T Consensus 62 ~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~ 141 (307)
T 2gas_A 62 GDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVFEEKASIRRVIE 141 (307)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcCCceEEeecccccCcccccCCCcchhHHHHHHHHHHHHH
Confidence 69999999999999999999999987788899999999998658999998888654332222343344599999999999
Q ss_pred hcCCCeEEEecccccccccccccCC---CCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCcc
Q 038413 81 AVEIPYTFVSANCYGAYFVNVLLRP---FEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNII 157 (191)
Q Consensus 81 ~~~~~~tilrp~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~ 157 (191)
+++++||++||+.|++++.+.+... ....+.+.++++++.++++++++|+|++++.++.++...++.+++.++++.+
T Consensus 142 ~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~ 221 (307)
T 2gas_A 142 AEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYL 221 (307)
T ss_dssp HHTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEE
T ss_pred HcCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcC
Confidence 9999999999999999876654332 1245567788888889999999999999999999887678888887424789
Q ss_pred CHHHHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 158 SQLELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 158 t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
|+.|+++++++++|+++++..+|.+++.+.+++
T Consensus 222 s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 254 (307)
T 2gas_A 222 TQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQE 254 (307)
T ss_dssp EHHHHHHHHHHHHTSCCEEEEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCceeecCHHHHHHHHhc
Confidence 999999999999999999999999999887653
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-30 Score=196.25 Aligned_cols=190 Identities=45% Similarity=0.751 Sum_probs=159.3
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHHHHHHHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE 80 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~ 80 (191)
+|+.|++++.++++|+|+|||+++......+.+++++|+++|+++|||+|+||....+.....|...+|.+|..+|++++
T Consensus 63 ~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~ 142 (308)
T 1qyc_A 63 GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIE 142 (308)
T ss_dssp CCTTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHH
T ss_pred eccCCHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceEeecccccCccccccCCcchhHHHHHHHHHHHHH
Confidence 69999999999999999999999987778889999999998668999999888654432222343445599999999999
Q ss_pred hcCCCeEEEecccccccccccccCC---CCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCcc
Q 038413 81 AVEIPYTFVSANCYGAYFVNVLLRP---FEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNII 157 (191)
Q Consensus 81 ~~~~~~tilrp~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~ 157 (191)
+.+++||++||+.|++++.+.+... ....+.+.++++++.++++++++|+|++++.++.++...++.+++.++++.+
T Consensus 143 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~ 222 (308)
T 1qyc_A 143 AEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTL 222 (308)
T ss_dssp HHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEE
T ss_pred hcCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCcc
Confidence 9999999999999999866544321 1245577888888899999999999999999999887678888887424789
Q ss_pred CHHHHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 158 SQLELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 158 t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
|+.|+++++++++|+++++..+|.+++.+.+++
T Consensus 223 s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 255 (308)
T 1qyc_A 223 SLNELVALWEKKIDKTLEKAYVPEEEVLKLIAD 255 (308)
T ss_dssp EHHHHHHHHHHHTTSCCEEEEECHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhCCCCceEeCCHHHHHHHHhc
Confidence 999999999999999999999999999887653
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-30 Score=196.55 Aligned_cols=189 Identities=45% Similarity=0.741 Sum_probs=157.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCC----CcccHHHHHHHHHHcCCccEEEcCCcccCCCC-CCCCCCchhhHHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYP----QFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDR-VRPLPPFEAYLEKKRIV 75 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~----~~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~-~~~~~~~~~~~~~k~~~ 75 (191)
||+.|++++.++++|+|+|||+++.. +..++.+++++|+++|+++|||+|+||..... .....|...+|.+|..+
T Consensus 62 ~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y~sK~~~ 141 (313)
T 1qyd_A 62 ASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKV 141 (313)
T ss_dssp CCSSCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHH
T ss_pred CCCCCHHHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcchHHHHHHH
Confidence 69999999999999999999999876 46788999999999976899999888854332 11123434455999999
Q ss_pred HHHHHhcCCCeEEEecccccccccccccCCC----CCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 76 RRAIEAVEIPYTFVSANCYGAYFVNVLLRPF----EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 76 e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
|+++++++++||++||+.|++++.+.+.... ...+.+.++++++.++++++++|+|++++.++.++...++.+++.
T Consensus 142 e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~ 221 (313)
T 1qyd_A 142 RRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIR 221 (313)
T ss_dssp HHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECC
T ss_pred HHHHHhcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEe
Confidence 9999999999999999999998766543321 244566678888889999999999999999999987678888887
Q ss_pred cCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 152 PQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 152 ~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
++++.+|+.|+++++++++|++++++.+|.+++.+.++
T Consensus 222 g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 259 (313)
T 1qyd_A 222 PPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMK 259 (313)
T ss_dssp CGGGEEEHHHHHHHHHHHHTCCCEECCBCSHHHHHHHT
T ss_pred CCCCccCHHHHHHHHHHhcCCCCceEECCHHHHHHHHh
Confidence 42478999999999999999999999999999988765
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-30 Score=197.80 Aligned_cols=189 Identities=66% Similarity=1.147 Sum_probs=158.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHHHHHHHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE 80 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~ 80 (191)
+|+.|++++.++++|+|+|||+++......+.+++++|+++|+++|||+|+||...++.....|...+|.+|..+|++++
T Consensus 65 ~Dl~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~ 144 (318)
T 2r6j_A 65 GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIE 144 (318)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHH
Confidence 69999999999999999999999877678899999999998658999999888644332211232334599999999999
Q ss_pred hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHH
Q 038413 81 AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQL 160 (191)
Q Consensus 81 ~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~ 160 (191)
+++++||++||+.|++++.+.+.......+.+.++++++.++++++++|+|++++.++.++...++.+++.++++.+|+.
T Consensus 145 ~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~ 224 (318)
T 2r6j_A 145 EANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQL 224 (318)
T ss_dssp HTTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHH
T ss_pred hcCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHH
Confidence 99999999999999998766544333355677788888889999999999999999999887678888887424789999
Q ss_pred HHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 161 ELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 161 e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
|+++++++++|+++++..+|.+++.+.+.
T Consensus 225 e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 253 (318)
T 2r6j_A 225 ELISRWEKKIGKKFKKIHVPEEEIVALTK 253 (318)
T ss_dssp HHHHHHHHHHTCCCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceeecCHHHHHHHHh
Confidence 99999999999999999999999987664
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-29 Score=194.23 Aligned_cols=189 Identities=69% Similarity=1.170 Sum_probs=156.8
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCcccCCCCCCCCCCchhhHHHHHHHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE 80 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~ 80 (191)
+|+.|++++.++++|+|+|||+++......+.+++++|+++|+++|||.|+||...++.....|....|.+|..+|++++
T Consensus 63 ~D~~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~ 142 (321)
T 3c1o_A 63 GEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIE 142 (321)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHHHHHHHHHHHHH
Confidence 69999999999999999999999877678889999999998658999988888543322211232233499999999999
Q ss_pred hcCCCeEEEecccccccccccccCC---CCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCcc
Q 038413 81 AVEIPYTFVSANCYGAYFVNVLLRP---FEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNII 157 (191)
Q Consensus 81 ~~~~~~tilrp~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~ 157 (191)
+++++||++||+.|++++.+.+... ....+.+.++++++.++++++++|+|++++.++.++...++.+++.++++.+
T Consensus 143 ~~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~ 222 (321)
T 3c1o_A 143 AAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNII 222 (321)
T ss_dssp HHTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEE
T ss_pred HcCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcc
Confidence 9999999999999999876543321 1245567788888889999999999999999999987678888887424899
Q ss_pred CHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 158 SQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 158 t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
|+.|+++++++.+|++++++.+|.+++.+.++
T Consensus 223 t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 254 (321)
T 3c1o_A 223 SQNELISLWEAKSGLSFKKVHMPDEQLVRLSQ 254 (321)
T ss_dssp EHHHHHHHHHHHHTSCCCEEEECHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCCcceeeeCCHHHHHHHHh
Confidence 99999999999999999999999999988765
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=170.54 Aligned_cols=178 Identities=19% Similarity=0.271 Sum_probs=143.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-----cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-----FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRI 74 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-----~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~ 74 (191)
+|+.|++++.++++|+|+|||+++... ..++.+++++|+++| ++|||. |+++..... |. .....+..
T Consensus 51 ~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~~~~~-----~~-~~~~~~~~ 123 (289)
T 3e48_A 51 LDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQHNN-----PF-HMSPYFGY 123 (289)
T ss_dssp CCTTCHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTT-CCEEEEEEESCCSTTC-----CS-TTHHHHHH
T ss_pred cCCCCHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcC-CCEEEEEcccCCCCCC-----CC-ccchhHHH
Confidence 699999999999999999999998653 467899999999999 999886 566543211 11 12333457
Q ss_pred HHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCC
Q 038413 75 VRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQT 154 (191)
Q Consensus 75 ~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~ 154 (191)
.++.++++|++|+++||+++++++...+.... .. .....+.++.++++++++|+|++++.++.++...++.|+++ +
T Consensus 124 ~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~-~~-~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~--~ 199 (289)
T 3e48_A 124 ASRLLSTSGIDYTYVRMAMYMDPLKPYLPELM-NM-HKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS--G 199 (289)
T ss_dssp HHHHHHHHCCEEEEEEECEESTTHHHHHHHHH-HH-TEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC--C
T ss_pred HHHHHHHcCCCEEEEeccccccccHHHHHHHH-HC-CCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC--C
Confidence 78888889999999999999997644322110 11 22344567888999999999999999999987668999998 5
Q ss_pred CccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 155 NIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 155 ~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
+.+|+.|+++.+++.+|++++++.+|.+++.+.+.
T Consensus 200 ~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 234 (289)
T 3e48_A 200 YSYDMKELAAILSEASGTEIKYEPVSLETFAEMYD 234 (289)
T ss_dssp EEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTC
T ss_pred CcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhc
Confidence 99999999999999999999999999999988775
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.93 E-value=7.9e-25 Score=166.73 Aligned_cols=177 Identities=19% Similarity=0.227 Sum_probs=141.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCC-----CcccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYP-----QFLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRI 74 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~-----~~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~ 74 (191)
+|+.|.+++.++++++|+|||+++.. +..++.+++++|+++| ++|||. |+.+.. . . ..+|..+|..
T Consensus 52 ~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~-----~-~~~y~~~K~~ 123 (287)
T 2jl1_A 52 GDYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYAFAE-E-----S-IIPLAHVHLA 123 (287)
T ss_dssp CCTTCHHHHHHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTT-CSEEEEEEETTGG-G-----C-CSTHHHHHHH
T ss_pred eccCCHHHHHHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-C-----C-CCchHHHHHH
Confidence 69999999999999999999999853 3567899999999999 999885 443332 1 1 2368889999
Q ss_pred HHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCC
Q 038413 75 VRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQT 154 (191)
Q Consensus 75 ~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~ 154 (191)
+|+++++.+++++++||+.+++++...+.......+... .+.++.++++++++|+|++++.++.++...++.|++++ +
T Consensus 124 ~E~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~-~ 201 (287)
T 2jl1_A 124 TEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIV-TNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVS-N 201 (287)
T ss_dssp HHHHHHHTTCCEEEEEECCBHHHHSSGGGHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECC-S
T ss_pred HHHHHHHcCCCeEEEECCEeccccchhhHHHHhhCCcee-ccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecC-C
Confidence 999999999999999999998875332211111223333 44567789999999999999999998766688999995 6
Q ss_pred CccCHHHHHHHHHHHhCCceEEEEcCHHHHHHH
Q 038413 155 NIISQLELISLWEQKTGRSFKRVHISEEELVKL 187 (191)
Q Consensus 155 ~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~ 187 (191)
+.+|+.|+++.+++.+|+++++..+|.+++...
T Consensus 202 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~ 234 (287)
T 2jl1_A 202 QPWTFDELAQILSEVSGKKVVHQPVSFEEEKNF 234 (287)
T ss_dssp SCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHH
Confidence 899999999999999999999999998876543
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-25 Score=169.41 Aligned_cols=181 Identities=14% Similarity=0.152 Sum_probs=141.5
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------cccHHHHHHHHHHcCCccEEEcCC-cccCCCCCCCCCCchhhHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------FLDQLKIVHAIKVAGNIKRFLPSE-FGCEEDRVRPLPPFEAYLEKK 72 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------~~~~~~li~aa~~~g~vkr~v~s~-~g~~~~~~~~~~~~~~~~~~k 72 (191)
+|+.|++++.++++|+|+|||+++... ...+.+++++|+++| ++|||.+| .+....... .+..+|+.+|
T Consensus 58 ~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~~~--~~~~~y~~sK 134 (299)
T 2wm3_A 58 GDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLTAG--RLAAAHFDGK 134 (299)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHTTT--SCCCHHHHHH
T ss_pred ecCCCHHHHHHHHhcCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccCCC--cccCchhhHH
Confidence 699999999999999999999987421 346789999999999 99999744 332111111 1245788999
Q ss_pred HHHHHHHHhcCCCeEEEecccccccccccccCCCCCCc-e-EEEecCCcceeeecchhhHHHHHHHHhcCcc-cCCceeE
Q 038413 73 RIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHD-D-VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR-TCNRIVI 149 (191)
Q Consensus 73 ~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~-~-~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~ 149 (191)
..+|++++++|++|+++||++|++++...+.......+ . ....+.++.++++++++|+|++++.++.++. ..++.++
T Consensus 135 ~~~e~~~~~~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~ 214 (299)
T 2wm3_A 135 GEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIG 214 (299)
T ss_dssp HHHHHHHHHHTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEE
T ss_pred HHHHHHHHHCCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEE
Confidence 99999999999999999999999986553322111222 2 2223346778999999999999999999863 4578999
Q ss_pred eecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHH
Q 038413 150 YRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVK 186 (191)
Q Consensus 150 i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~ 186 (191)
++ ++.+|+.|+++.+++.+|++++++.+|.+++.+
T Consensus 215 ~~--g~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~ 249 (299)
T 2wm3_A 215 LS--TCRHTAEEYAALLTKHTRKVVHDAKMTPEDYEK 249 (299)
T ss_dssp CC--SEEECHHHHHHHHHHHHSSCEEECCCCTHHHHT
T ss_pred ee--eccCCHHHHHHHHHHHHCCCceeEecCHHHHHh
Confidence 97 478999999999999999999999999988764
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-24 Score=163.65 Aligned_cols=176 Identities=14% Similarity=0.204 Sum_probs=139.6
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCC---CcccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYP---QFLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVR 76 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~---~~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e 76 (191)
+|+.|.+++.++++++|+|||+++.. +..++.+++++|+++| ++|||. |+.+.. . . ..+|..+|..+|
T Consensus 51 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~-----~-~~~y~~sK~~~e 122 (286)
T 2zcu_A 51 ADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLHAD-T-----S-PLGLADEHIETE 122 (286)
T ss_dssp CCTTCHHHHHHHTTTCSEEEECC--------CHHHHHHHHHHHHT-CCEEEEEEETTTT-T-----C-CSTTHHHHHHHH
T ss_pred cCCCCHHHHHHHHhCCCEEEEeCCCCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-C-----C-cchhHHHHHHHH
Confidence 69999999999999999999999853 3678899999999999 999885 443332 1 1 236889999999
Q ss_pred HHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCc
Q 038413 77 RAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNI 156 (191)
Q Consensus 77 ~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~ 156 (191)
+++++++++++++||+.++++....+... ...+.+. .+.++.++++++++|+|++++.++.++...++.+++++ ++.
T Consensus 123 ~~~~~~~~~~~ilrp~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~-~~~ 199 (286)
T 2zcu_A 123 KMLADSGIVYTLLRNGWYSENYLASAPAA-LEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAG-DSA 199 (286)
T ss_dssp HHHHHHCSEEEEEEECCBHHHHHTTHHHH-HHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECC-SSC
T ss_pred HHHHHcCCCeEEEeChHHhhhhHHHhHHh-hcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeC-CCc
Confidence 99998999999999998887643221110 1223443 55677789999999999999999998766688999995 689
Q ss_pred cCHHHHHHHHHHHhCCceEEEEcCHHHHHHH
Q 038413 157 ISQLELISLWEQKTGRSFKRVHISEEELVKL 187 (191)
Q Consensus 157 ~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~ 187 (191)
+|+.|+++.+++.+|+++++..+|.+++...
T Consensus 200 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~ 230 (286)
T 2zcu_A 200 WTLTQLAAELTKQSGKQVTYQNLSEADFAAA 230 (286)
T ss_dssp BCHHHHHHHHHHHHSSCCEEEECCHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCceeeCCHHHHHHH
Confidence 9999999999999999999999998877653
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=156.78 Aligned_cols=177 Identities=14% Similarity=0.109 Sum_probs=140.5
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-----------cccHHHHHHHHHHcCCccEEEc-CC---cccCC----CCCCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-----------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE----DRVRP 61 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-----------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~----~~~~~ 61 (191)
+|+. .+++.++++++|+|||+++... +.++.+++++|+++| ++|||. |+ ||... .+...
T Consensus 49 ~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~~~E~~~ 126 (311)
T 3m2p_A 49 SDYT-LEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETSLPWNEKEL 126 (311)
T ss_dssp CCCC-HHHHHHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCSBCTTSC
T ss_pred cccc-HHHHHHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCC
Confidence 6888 9999999999999999998642 456799999999999 999884 33 44321 12222
Q ss_pred CCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc------cccCCCCCCceEEEecCCcceeeecchhhHH
Q 038413 62 LPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN------VLLRPFEPHDDVVVYGNGEAKAVFNYEEDIA 131 (191)
Q Consensus 62 ~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva 131 (191)
..|..+|..+|..+|+++++ .+++++++||+.++++... .+......+..+.++++++..+++++++|+|
T Consensus 127 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva 206 (311)
T 3m2p_A 127 PLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAA 206 (311)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHH
Confidence 34667888999999999876 6999999999999986432 1111112456777888888899999999999
Q ss_pred HHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCH
Q 038413 132 KCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISE 181 (191)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~ 181 (191)
++++.+++++. .++.|++++ ++.+|+.|+++.+++.+|++.++...+.
T Consensus 207 ~a~~~~~~~~~-~~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 254 (311)
T 3m2p_A 207 KSVIYALKQEK-VSGTFNIGS-GDALTNYEVANTINNAFGNKDNLLVKNP 254 (311)
T ss_dssp HHHHHHTTCTT-CCEEEEECC-SCEECHHHHHHHHHHHTTCTTCEEECSS
T ss_pred HHHHHHHhcCC-CCCeEEeCC-CCcccHHHHHHHHHHHhCCCCcceecCC
Confidence 99999999876 689999995 7999999999999999999877766543
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=158.74 Aligned_cols=179 Identities=15% Similarity=0.172 Sum_probs=140.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc-CC---cccC------CC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCE------ED 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~------~~ 57 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++.+ ++|||. |+ ||.. ..
T Consensus 63 ~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~ 141 (347)
T 4id9_A 63 GSLEDGQALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVT 141 (347)
T ss_dssp SCTTCHHHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBC
T ss_pred cCcCCHHHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcC
Confidence 699999999999999999999998653 356799999999999 999884 33 5431 11
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccc-------------ccccc-----------------ccc
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYG-------------AYFVN-----------------VLL 103 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~-------------~~~~~-----------------~~~ 103 (191)
+.....|..+|..+|..+|+++++ .+++++++||+.++ ++... .+.
T Consensus 142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~ 221 (347)
T 4id9_A 142 EDHPLCPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELL 221 (347)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHH
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHH
Confidence 122234566788999999998863 68999999999988 54311 111
Q ss_pred CCCCCCceEEEecCCcceeee----cchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEc
Q 038413 104 RPFEPHDDVVVYGNGEAKAVF----NYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 104 ~~~~~~~~~~~~~~g~~~~~~----i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~ 179 (191)
.....+..+.++++++..+++ +|++|+|++++.++.++...++.|++++ ++.+|+.|+++.+.+.+|.+.++..+
T Consensus 222 ~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~ 300 (347)
T 4id9_A 222 QSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGA-DEPADFAALLPKIAALTGLPIVTVDF 300 (347)
T ss_dssp HHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESC-SSCEEHHHHHHHHHHHHCCCEEEEEC
T ss_pred HHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECC-CCcccHHHHHHHHHHHhCCCCceeeC
Confidence 111245566778888888899 9999999999999999866689999996 78999999999999999999888766
Q ss_pred CH
Q 038413 180 SE 181 (191)
Q Consensus 180 ~~ 181 (191)
|.
T Consensus 301 p~ 302 (347)
T 4id9_A 301 PG 302 (347)
T ss_dssp SS
T ss_pred CC
Confidence 54
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=154.70 Aligned_cols=178 Identities=16% Similarity=0.140 Sum_probs=136.7
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC-
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~- 57 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.| ++|||. |+ ||....
T Consensus 45 ~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~ 123 (319)
T 4b8w_A 45 ADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDKTTY 123 (319)
T ss_dssp CCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSSCCS
T ss_pred cccCCHHHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCCCCC
Confidence 699999999999987 999999998642 356789999999999 999885 44 432211
Q ss_pred ---CCC----CCCCch-hhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc----------ccCC----CCCCce
Q 038413 58 ---RVR----PLPPFE-AYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV----------LLRP----FEPHDD 111 (191)
Q Consensus 58 ---~~~----~~~~~~-~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~----------~~~~----~~~~~~ 111 (191)
+.. ...|.. +|..+|..+|++++. .+++++++||+.++++.... +... ...+..
T Consensus 124 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (319)
T 4b8w_A 124 PIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSA 203 (319)
T ss_dssp SBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCC
T ss_pred CccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCc
Confidence 110 122333 477899999988865 69999999999998864321 1110 124567
Q ss_pred EEEecCCcceeeecchhhHHHHHHHHhcCcc-cCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR-TCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 112 ~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
+.++++++..+++||++|+|++++.++.++. ..++.|++++ ++.+|+.|+++.+.+.+|++.++...+
T Consensus 204 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 272 (319)
T 4b8w_A 204 LTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGE-EDEVSIKEAAEAVVEAMDFHGEVTFDT 272 (319)
T ss_dssp EEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCG-GGCEEHHHHHHHHHHHTTCCSCEEEET
T ss_pred eEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecC-CCceeHHHHHHHHHHHhCCCCcEEeCC
Confidence 7888999999999999999999999998754 4467899986 799999999999999999887666543
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-22 Score=156.77 Aligned_cols=170 Identities=17% Similarity=0.145 Sum_probs=135.3
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC----
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED---- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~---- 57 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++.+ ++|||. |+ ||....
T Consensus 86 ~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 164 (351)
T 3ruf_A 86 GDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPALPKV 164 (351)
T ss_dssp CCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBC
T ss_pred ccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCCCCCc
Confidence 699999999999999999999998642 466789999999999 999884 33 443221
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc----------cCCCCCCceEEEecCCcceee
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL----------LRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+.....|..+|..+|..+|++++. .|++++++||+.++++..... ......+..+.++++++..++
T Consensus 165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 244 (351)
T 3ruf_A 165 EENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRD 244 (351)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEEC
T ss_pred cCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEe
Confidence 122234567788999999998864 599999999999998643211 000114556778888999999
Q ss_pred ecchhhHHHHHHHHhcC-cccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 124 FNYEEDIAKCTIKVIND-PRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~-~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+||++|+|++++.++.+ +...++.|++++ ++.+|+.|+++.+++.+|+
T Consensus 245 ~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~ 293 (351)
T 3ruf_A 245 FCYIDNVIQMNILSALAKDSAKDNIYNVAV-GDRTTLNELSGYIYDELNL 293 (351)
T ss_dssp CEEHHHHHHHHHHHHTCCGGGCSEEEEESC-SCCEEHHHHHHHHHHHHHT
T ss_pred eEEHHHHHHHHHHHHhhccccCCCEEEeCC-CCcccHHHHHHHHHHHhCc
Confidence 99999999999999987 456789999996 7999999999999999998
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.3e-22 Score=154.88 Aligned_cols=172 Identities=16% Similarity=0.227 Sum_probs=135.6
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.| ++|||. |+ ||...
T Consensus 82 ~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~~~ 160 (346)
T 4egb_A 82 GEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGKTG 160 (346)
T ss_dssp CCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCSSC
T ss_pred cCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCcCC
Confidence 699999999999997 999999998642 356799999999999 999884 33 44321
Q ss_pred --CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc------cccCCCCCCceEEEecCCcceeee
Q 038413 57 --DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN------VLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 57 --~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
.+.....|..+|..+|..+|+++++ .|++++++||+.++++... .+......+..+.++++++..+++
T Consensus 161 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
T 4egb_A 161 RFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDW 240 (346)
T ss_dssp CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECE
T ss_pred CcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEee
Confidence 1122234567788999999998876 5999999999999886431 111111245567788889899999
Q ss_pred cchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceE
Q 038413 125 NYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~ 175 (191)
||++|+|++++.++.++. .++.|++++ ++.+|+.|+++.+++.+|.+.+
T Consensus 241 i~v~Dva~a~~~~~~~~~-~g~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~ 289 (346)
T 4egb_A 241 LHVTDHCSAIDVVLHKGR-VGEVYNIGG-NNEKTNVEVVEQIITLLGKTKK 289 (346)
T ss_dssp EEHHHHHHHHHHHHHHCC-TTCEEEECC-SCCEEHHHHHHHHHHHHTCCGG
T ss_pred EEHHHHHHHHHHHHhcCC-CCCEEEECC-CCceeHHHHHHHHHHHhCCCcc
Confidence 999999999999999876 678999995 7889999999999999998644
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.3e-21 Score=144.83 Aligned_cols=177 Identities=15% Similarity=0.194 Sum_probs=138.8
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+.+.++++ ++|+|||+++... +.++.+++++|++.| + |||. |+ |+...
T Consensus 40 ~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~~~ 117 (287)
T 3sc6_A 40 LDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRPEG 117 (287)
T ss_dssp SCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCSSC
T ss_pred cCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCCCC
Confidence 68999999999998 6999999998653 345789999999999 8 5663 43 43221
Q ss_pred -CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEeccccccccccccc----CCCCCCceEEEecCCcceeeecchhhHH
Q 038413 57 -DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLL----RPFEPHDDVVVYGNGEAKAVFNYEEDIA 131 (191)
Q Consensus 57 -~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~i~~~Dva 131 (191)
.+.....|..+|..+|..+|+++++...+++++||+.++++....+. .....+..+.+++ +..++++|++|+|
T Consensus 118 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva 195 (287)
T 3sc6_A 118 YDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVA--DQIGSPTYVADLN 195 (287)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeec--CcccCceEHHHHH
Confidence 11222356678899999999999998889999999999885432221 1112455666665 3678999999999
Q ss_pred HHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 132 KCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
++++.++.++. ++.|++++ ++.+|+.|+++.+++.+|++.++..+|.+++
T Consensus 196 ~~~~~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 245 (287)
T 3sc6_A 196 VMINKLIHTSL--YGTYHVSN-TGSCSWFEFAKKIFSYANMKVNVLPVSTEEF 245 (287)
T ss_dssp HHHHHHHTSCC--CEEEECCC-BSCEEHHHHHHHHHHHHTCCCEEEEECHHHH
T ss_pred HHHHHHHhCCC--CCeEEEcC-CCcccHHHHHHHHHHHcCCCcceeeeehhhc
Confidence 99999999876 78999995 7889999999999999999999988887655
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.2e-21 Score=149.56 Aligned_cols=174 Identities=14% Similarity=0.162 Sum_probs=133.7
Q ss_pred CC-CCCHHHHHHhhccCcEEEEccCCCC---cccHHHHHHHHHHcCCccEEEc-CCccc-CCCCCCCCCCchhhHHHHHH
Q 038413 1 GE-LDEHEKIVSILKEVDVVISTVAYPQ---FLDQLKIVHAIKVAGNIKRFLP-SEFGC-EEDRVRPLPPFEAYLEKKRI 74 (191)
Q Consensus 1 gD-~~d~~~l~~a~~g~d~V~~~~~~~~---~~~~~~li~aa~~~g~vkr~v~-s~~g~-~~~~~~~~~~~~~~~~~k~~ 74 (191)
+| ++|++++.++++++|+|||+++... .....+++++|+++|+++|||. |+.+. .... .+..+|+.+|.+
T Consensus 58 ~D~l~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~----~~~~~y~~sK~~ 133 (352)
T 1xgk_A 58 GPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP----WPAVPMWAPKFT 133 (352)
T ss_dssp SCCTTCHHHHHHHHTTCSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS----CCCCTTTHHHHH
T ss_pred CCccCCHHHHHHHHhcCCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCC----CCCccHHHHHHH
Confidence 58 9999999999999999999887541 2334999999999865789885 33321 1111 234578899999
Q ss_pred HHHHHHhcCCCeEEEecccccccccccccC---CC-CCCceE--EEecCCcceeeecch-hhHHHHHHHHhcCcc--cCC
Q 038413 75 VRRAIEAVEIPYTFVSANCYGAYFVNVLLR---PF-EPHDDV--VVYGNGEAKAVFNYE-EDIAKCTIKVINDPR--TCN 145 (191)
Q Consensus 75 ~e~~l~~~~~~~tilrp~~~~~~~~~~~~~---~~-~~~~~~--~~~~~g~~~~~~i~~-~Dva~~~~~~l~~~~--~~~ 145 (191)
+|+++++.+++++++||+.|..+....+.. .. ...+.+ .++++++.+++++++ +|+|++++.++.++. ..+
T Consensus 134 ~E~~~~~~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g 213 (352)
T 1xgk_A 134 VENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNG 213 (352)
T ss_dssp HHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTT
T ss_pred HHHHHHHcCCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCC
Confidence 999999999999999999876654322111 01 123333 446777888999999 899999999998752 358
Q ss_pred ceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 146 RIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 146 ~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
+.|+++ ++.+|+.|+++.+++.+|+++++..+|
T Consensus 214 ~~~~l~--~~~~s~~e~~~~i~~~~G~~~~~~~vp 246 (352)
T 1xgk_A 214 HRIALT--FETLSPVQVCAAFSRALNRRVTYVQVP 246 (352)
T ss_dssp CEEEEC--SEEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred eEEEEe--cCCCCHHHHHHHHHHHHCCCCceEECC
Confidence 999998 477999999999999999999999988
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.1e-21 Score=147.45 Aligned_cols=176 Identities=17% Similarity=0.207 Sum_probs=135.5
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC----C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE----D 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~----~ 57 (191)
+|+.| +++.++++++|+|||+++... +.++.+++++|++.+ ++|||. |+ ||... .
T Consensus 50 ~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~~~~~ 127 (313)
T 3ehe_A 50 ADLAA-DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIPTP 127 (313)
T ss_dssp CCTTT-SCCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSSSSBC
T ss_pred CcCCh-HHHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCCCCCC
Confidence 58888 889999999999999998532 356789999999999 999884 43 44321 1
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc-----ccC-CCCCCceEEEecCCcceeeecch
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV-----LLR-PFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~-----~~~-~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
+.....|..+|..+|..+|.+++. .|++++++||+.++++.... +.. .......+.+++++++.++++|+
T Consensus 128 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 207 (313)
T 3ehe_A 128 EDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYI 207 (313)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEH
Confidence 112234566788999999998864 59999999999999864321 111 01133567788889899999999
Q ss_pred hhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 128 EDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
+|+|++++.++..+ ..++.|++++ ++.+|+.|+++.+++.+|.+.++...+
T Consensus 208 ~Dva~a~~~~~~~~-~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 258 (313)
T 3ehe_A 208 SDCVDAMLFGLRGD-ERVNIFNIGS-EDQIKVKRIAEIVCEELGLSPRFRFTG 258 (313)
T ss_dssp HHHHHHHHHHTTCC-SSEEEEECCC-SCCEEHHHHHHHHHHHTTCCCEEEEC-
T ss_pred HHHHHHHHHHhccC-CCCceEEECC-CCCeeHHHHHHHHHHHhCCCCceEECC
Confidence 99999999999843 4578999995 789999999999999999987776654
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=153.90 Aligned_cols=172 Identities=20% Similarity=0.252 Sum_probs=133.2
Q ss_pred CCCC-CHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC---
Q 038413 1 GELD-EHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED--- 57 (191)
Q Consensus 1 gD~~-d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~--- 57 (191)
||+. |.+.+.++++++|+|||+++... +.++.+++++|++.| +|||. |+ ||....
T Consensus 76 ~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~ 153 (372)
T 3slg_A 76 GDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQF 153 (372)
T ss_dssp CCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSB
T ss_pred CccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCC
Confidence 6899 99999999999999999998643 456789999999998 67774 43 443211
Q ss_pred -CCCCC-------CCchhhHHHHHHHHHHHHhc---CCCeEEEeccccccccccc--------------ccCCCCCCceE
Q 038413 58 -RVRPL-------PPFEAYLEKKRIVRRAIEAV---EIPYTFVSANCYGAYFVNV--------------LLRPFEPHDDV 112 (191)
Q Consensus 58 -~~~~~-------~~~~~~~~~k~~~e~~l~~~---~~~~tilrp~~~~~~~~~~--------------~~~~~~~~~~~ 112 (191)
+.... .|..+|..+|..+|+++++. +++++++||+.++++.... +......+..+
T Consensus 154 ~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (372)
T 3slg_A 154 DPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENI 233 (372)
T ss_dssp CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCE
T ss_pred CccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCc
Confidence 11111 34557889999999999875 9999999999998865321 11101145567
Q ss_pred EEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 113 VVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 113 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
.++++++..+++||++|+|++++.+++++. ..++.|+++++++.+|+.|+++.+++.+|++.
T Consensus 234 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~ 297 (372)
T 3slg_A 234 SLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFP 297 (372)
T ss_dssp EEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCT
T ss_pred EEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCc
Confidence 888888889999999999999999999875 56899999841379999999999999999754
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-21 Score=148.91 Aligned_cols=176 Identities=11% Similarity=0.054 Sum_probs=130.6
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC-----CC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE-----DR 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~-----~~ 58 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|+++| ++|||. |+ |+... ++
T Consensus 63 ~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~E 141 (342)
T 2x4g_A 63 AEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPGHE 141 (342)
T ss_dssp CCTTCHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCBCT
T ss_pred ecCCCHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCCCC
Confidence 699999999999999999999998532 356789999999999 999884 43 33221 11
Q ss_pred CCCCCC----chhhHHHHHHHHHHHHh---cCCCeEEEeccccccccc-c-c---ccCCCCCCceEEEecCCcceeeecc
Q 038413 59 VRPLPP----FEAYLEKKRIVRRAIEA---VEIPYTFVSANCYGAYFV-N-V---LLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 59 ~~~~~~----~~~~~~~k~~~e~~l~~---~~~~~tilrp~~~~~~~~-~-~---~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
.....| ...|..+|..+|+++++ .|++++++||+.++++.. . . +......+....+ ++.++++++
T Consensus 142 ~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~ 218 (342)
T 2x4g_A 142 GLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY---VAGQRNVID 218 (342)
T ss_dssp TCCCSSCCTTSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE---ECCEEEEEE
T ss_pred CCCCCccccccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc---cCCCcceee
Confidence 222234 56788999999998875 389999999999988643 1 1 1000012222333 456789999
Q ss_pred hhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHH
Q 038413 127 EEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEEL 184 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 184 (191)
++|+|++++.++.++.. ++.|++++ ++ +|+.|+++.+.+.+|++.++ .+|...+
T Consensus 219 v~Dva~~~~~~~~~~~~-g~~~~v~~-~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~ 272 (342)
T 2x4g_A 219 AAEAGRGLLMALERGRI-GERYLLTG-HN-LEMADLTRRIAELLGQPAPQ-PMSMAMA 272 (342)
T ss_dssp HHHHHHHHHHHHHHSCT-TCEEEECC-EE-EEHHHHHHHHHHHHTCCCCE-EECHHHH
T ss_pred HHHHHHHHHHHHhCCCC-CceEEEcC-Cc-ccHHHHHHHHHHHhCCCCCC-cCCHHHH
Confidence 99999999999987654 88999995 67 99999999999999999888 8887654
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.3e-21 Score=148.20 Aligned_cols=178 Identities=19% Similarity=0.180 Sum_probs=135.2
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC-
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~- 57 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.+ ++|||. |+ ||....
T Consensus 39 ~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~~ 117 (321)
T 1e6u_A 39 LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQ 117 (321)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCS
T ss_pred CCccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCCC
Confidence 58999999999998 9999999998652 356789999999999 999884 43 432111
Q ss_pred ---CCC----CCCCc-hhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc------cc----CCCCC----C-c
Q 038413 58 ---RVR----PLPPF-EAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV------LL----RPFEP----H-D 110 (191)
Q Consensus 58 ---~~~----~~~~~-~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~------~~----~~~~~----~-~ 110 (191)
+.. ...|. ..|..+|..+|+++++ .+++++++||+.++++.... +. ..... + .
T Consensus 118 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 197 (321)
T 1e6u_A 118 PMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAP 197 (321)
T ss_dssp SBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCS
T ss_pred CcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCC
Confidence 111 12333 4677899999998875 48999999999998864321 10 00001 1 4
Q ss_pred eEEEecCCcceeeecchhhHHHHHHHHhcCcccC--------CceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 111 DVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTC--------NRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 111 ~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--------~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
.+.++++++..+++||++|+|++++.+++++... ++.|++++ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus 198 ~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 274 (321)
T 1e6u_A 198 DVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGT-GVDCTIRELAQTIAKVVGYKGRVVFDA 274 (321)
T ss_dssp EEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESC-SCCEEHHHHHHHHHHHHTCCSEEEEET
T ss_pred ceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCC-CCCccHHHHHHHHHHHhCCCCceEeCC
Confidence 6677888888999999999999999999887542 68999985 789999999999999999987766544
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-21 Score=151.64 Aligned_cols=176 Identities=16% Similarity=0.203 Sum_probs=134.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC---
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED--- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~--- 57 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++.+ ++|||. |+ |+....
T Consensus 79 ~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~ 157 (379)
T 2c5a_A 79 VDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLET 157 (379)
T ss_dssp CCTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSS
T ss_pred CCCCCHHHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCc
Confidence 689999999999999999999998532 245789999999999 999884 33 332110
Q ss_pred ------CCC--CCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc----------ccCCCCCCc-eEEE
Q 038413 58 ------RVR--PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV----------LLRPFEPHD-DVVV 114 (191)
Q Consensus 58 ------~~~--~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~----------~~~~~~~~~-~~~~ 114 (191)
+.. ...|...|..+|..+|+++++ .+++++++||+.++++.... +......+. .+.+
T Consensus 158 ~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (379)
T 2c5a_A 158 TNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEM 237 (379)
T ss_dssp SSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEE
T ss_pred cCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEE
Confidence 000 123456788899999988754 58999999999999864321 110000222 3677
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
+++++..++++|++|+|++++.+++++ .++.+++++ ++.+|+.|+++.+.+.+|++.++..+|
T Consensus 238 ~g~g~~~~~~i~v~Dva~ai~~~l~~~--~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~p 300 (379)
T 2c5a_A 238 WGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGS-DEMVSMNEMAEMVLSFEEKKLPIHHIP 300 (379)
T ss_dssp ESCSCCEECCEEHHHHHHHHHHHHHSS--CCSCEEECC-CCCEEHHHHHHHHHHTTTCCCCEEEEC
T ss_pred eCCCCeeEEEEEHHHHHHHHHHHhhcc--CCCeEEeCC-CCccCHHHHHHHHHHHhCCCCceeeCC
Confidence 888888899999999999999999876 467899995 789999999999999999887766554
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4e-21 Score=147.81 Aligned_cols=177 Identities=13% Similarity=0.156 Sum_probs=132.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC----C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE----D 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~----~ 57 (191)
+|+.|.+ +.+++++ |+|||+++... +.++.+++++|++.+ ++|||. |+ ||... .
T Consensus 50 ~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~~~~~ 126 (312)
T 3ko8_A 50 RDLKDYS-WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIPTP 126 (312)
T ss_dssp CCTTSTT-TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBC
T ss_pred CccccHH-HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCCCCCC
Confidence 5888988 8888888 99999998532 356789999999999 999884 33 44321 1
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc-----ccC-CCCCCceEEEecCCcceeeecch
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV-----LLR-PFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~-----~~~-~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
+.....|..+|..+|..+|++++. .|++++++||+.++++.... +.. .......+.++++++..++++|+
T Consensus 127 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 206 (312)
T 3ko8_A 127 EEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYV 206 (312)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEH
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEH
Confidence 122234567888999999998865 59999999999999864321 111 01133567788888889999999
Q ss_pred hhHHHHHHHHhcC---cccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCH
Q 038413 128 EDIAKCTIKVIND---PRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISE 181 (191)
Q Consensus 128 ~Dva~~~~~~l~~---~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~ 181 (191)
+|+|++++.++++ +...++.|++++ ++.+|+.|+++.+.+.+|++.++..+|.
T Consensus 207 ~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 262 (312)
T 3ko8_A 207 RDAVEATLAAWKKFEEMDAPFLALNVGN-VDAVRVLDIAQIVAEVLGLRPEIRLVPS 262 (312)
T ss_dssp HHHHHHHHHHHHHHHHSCCSEEEEEESC-SSCEEHHHHHHHHHHHHTCCCEEEEC--
T ss_pred HHHHHHHHHHHHhccccCCCCcEEEEcC-CCceeHHHHHHHHHHHhCCCCceeecCc
Confidence 9999999999987 445678999995 7899999999999999999888877654
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-20 Score=144.89 Aligned_cols=178 Identities=16% Similarity=0.232 Sum_probs=135.8
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC--
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED-- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~-- 57 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.+ +++||. |+ ||....
T Consensus 62 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~ 140 (341)
T 3enk_A 62 TDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVPERSP 140 (341)
T ss_dssp CCTTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSCSSSS
T ss_pred eecCCHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCCCCCC
Confidence 69999999999998 8999999998642 356789999999999 999884 33 443211
Q ss_pred --CCCCCCCchhhHHHHHHHHHHHHh----c-CCCeEEEeccccccccccccc----------------C-CCCCCceEE
Q 038413 58 --RVRPLPPFEAYLEKKRIVRRAIEA----V-EIPYTFVSANCYGAYFVNVLL----------------R-PFEPHDDVV 113 (191)
Q Consensus 58 --~~~~~~~~~~~~~~k~~~e~~l~~----~-~~~~tilrp~~~~~~~~~~~~----------------~-~~~~~~~~~ 113 (191)
+.....|..+|..+|..+|++++. . +++++++||+..++....... . ..-....+.
T Consensus 141 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (341)
T 3enk_A 141 IDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLR 220 (341)
T ss_dssp BCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEE
T ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceE
Confidence 112223556788999999999875 2 599999999988875321100 0 000224566
Q ss_pred Eec------CCcceeeecchhhHHHHHHHHhcCc--ccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 114 VYG------NGEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 114 ~~~------~g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
++| +|++.+++||++|+|++++.++.++ ...++.|++++ ++.+|+.|+++.+++.+|++.++...+
T Consensus 221 ~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 294 (341)
T 3enk_A 221 VFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGT-GRGYSVLEVVRAFEKASGRAVPYELVA 294 (341)
T ss_dssp EECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESC-SCCEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred EeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCC-CCceeHHHHHHHHHHHhCCCcceeeCC
Confidence 777 7888899999999999999999873 35689999985 799999999999999999987776554
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=141.96 Aligned_cols=166 Identities=14% Similarity=0.045 Sum_probs=126.6
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--cccHHHHHHHHHH--cCCccEEEc-CC---cccCC----CCCCCCCCchhh
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--FLDQLKIVHAIKV--AGNIKRFLP-SE---FGCEE----DRVRPLPPFEAY 68 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--~~~~~~li~aa~~--~g~vkr~v~-s~---~g~~~----~~~~~~~~~~~~ 68 (191)
+|+.|.+ +.++|+|||+++... .....+++++|++ .+ ++|||. |+ ||... .+.....|..+|
T Consensus 54 ~D~~d~~-----~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y 127 (286)
T 3ius_A 54 WPGEEPS-----LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDETTPLTPTAAR 127 (286)
T ss_dssp SSSSCCC-----CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHH
T ss_pred ecccccc-----cCCCCEEEECCCccccccHHHHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCcCCCCCCCCCCHH
Confidence 4666633 789999999998754 2346899999999 78 999884 33 44322 112223466778
Q ss_pred HHHHHHHHHHHHhc-CCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCce
Q 038413 69 LEKKRIVRRAIEAV-EIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRI 147 (191)
Q Consensus 69 ~~~k~~~e~~l~~~-~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~ 147 (191)
..+|..+|+++++. +++++++||+.++++....+... ..+....+.++ +..+++||++|+|++++.+++++. .++.
T Consensus 128 ~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~~ 204 (286)
T 3ius_A 128 GRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSKL-GKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGAV 204 (286)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEEEECEEEBTTBSSSTTS-SSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTCE
T ss_pred HHHHHHHHHHHHhhcCCCEEEEeccceECCCchHHHHH-hcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCCE
Confidence 89999999999997 99999999999998753332221 23444555544 567899999999999999999876 5789
Q ss_pred eEeecCCCccCHHHHHHHHHHHhCCceEE
Q 038413 148 VIYRPQTNIISQLELISLWEQKTGRSFKR 176 (191)
Q Consensus 148 ~~i~~~~~~~t~~e~~~~~~~~~g~~~~~ 176 (191)
|++++ ++.+|+.|+++.+++.+|++.+.
T Consensus 205 ~~i~~-~~~~s~~e~~~~i~~~~g~~~~~ 232 (286)
T 3ius_A 205 YNVCD-DEPVPPQDVIAYAAELQGLPLPP 232 (286)
T ss_dssp EEECC-SCCBCHHHHHHHHHHHHTCCCCC
T ss_pred EEEeC-CCCccHHHHHHHHHHHcCCCCCc
Confidence 99995 78899999999999999987543
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-21 Score=149.53 Aligned_cols=170 Identities=13% Similarity=0.086 Sum_probs=132.6
Q ss_pred CCCCCHHHHHHhhcc-CcEEEEccCCC----------CcccHHHHHHHHHHcCCccEEEc-CC---cccCC----CCCCC
Q 038413 1 GELDEHEKIVSILKE-VDVVISTVAYP----------QFLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE----DRVRP 61 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-~d~V~~~~~~~----------~~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~----~~~~~ 61 (191)
+|+.|.+++.+++++ +|+|||+++.. ++.++.+++++|++.+ ++|||. |+ ||... .+...
T Consensus 48 ~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~ 126 (286)
T 3gpi_A 48 ADVTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEEWLDEDTP 126 (286)
T ss_dssp CCTTCGGGCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSSEECTTSC
T ss_pred ccCCChHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCCCCCCCCC
Confidence 689999999999998 99999999753 2567899999999999 999884 33 44322 11222
Q ss_pred CCCchhhHHHHHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCc
Q 038413 62 LPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 62 ~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
..|..+|..+|..+|++ .+. ++++++||+.++++....+...... .. .+++++..+++++++|+|++++.++.++
T Consensus 127 ~~p~~~Y~~sK~~~E~~-~~~-~~~~ilR~~~v~G~~~~~~~~~~~~-~~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 201 (286)
T 3gpi_A 127 PIAKDFSGKRMLEAEAL-LAA-YSSTILRFSGIYGPGRLRMIRQAQT-PE--QWPARNAWTNRIHRDDGAAFIAYLIQQR 201 (286)
T ss_dssp CCCCSHHHHHHHHHHHH-GGG-SSEEEEEECEEEBTTBCHHHHHTTC-GG--GSCSSBCEECEEEHHHHHHHHHHHHHHH
T ss_pred CCCCChhhHHHHHHHHH-Hhc-CCeEEEecccccCCCchhHHHHHHh-cc--cCCCcCceeEEEEHHHHHHHHHHHHhhh
Confidence 34667888999999999 777 9999999999998754433211112 11 2366788899999999999999999985
Q ss_pred --ccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEE
Q 038413 142 --RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177 (191)
Q Consensus 142 --~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~ 177 (191)
...++.|++++ ++.+|+.|+++.+.+.+|++.++.
T Consensus 202 ~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~ 238 (286)
T 3gpi_A 202 SHAVPERLYIVTD-NQPLPVHDLLRWLADRQGIAYPAG 238 (286)
T ss_dssp TTSCCCSEEEECC-SCCEEHHHHHHHHHHHTTCCCCCS
T ss_pred ccCCCCceEEEeC-CCCCCHHHHHHHHHHHcCCCCCCC
Confidence 45689999985 789999999999999999876543
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=145.41 Aligned_cols=175 Identities=13% Similarity=0.155 Sum_probs=132.9
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC----ccc-C--
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE----FGC-E-- 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~----~g~-~-- 55 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.+ ++|||. |+ ||. .
T Consensus 50 ~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~~ 128 (311)
T 2p5y_A 50 VDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPEG 128 (311)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCTT
T ss_pred CCCCCHHHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCCC
Confidence 68999999999998 8999999998642 356789999999999 999884 33 332 1
Q ss_pred --CCCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc---------ccCCCCCCceEEEe-----
Q 038413 56 --EDRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV---------LLRPFEPHDDVVVY----- 115 (191)
Q Consensus 56 --~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~---------~~~~~~~~~~~~~~----- 115 (191)
..+.....|..+|..+|..+|++++. .+++++++||+.++++.... +......+..+.++
T Consensus 129 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (311)
T 2p5y_A 129 ERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTP 208 (311)
T ss_dssp CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSST
T ss_pred CCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccC
Confidence 11111223556788999999998864 58999999999988754211 11000123455666
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
+++...++++|++|+|++++.++.++ ++.|++++ ++.+|+.|+++.+.+.+|.+.++...|
T Consensus 209 ~~g~~~~~~i~v~Dva~a~~~~~~~~---~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 269 (311)
T 2p5y_A 209 GDEGCVRDYVYVGDVAEAHALALFSL---EGIYNVGT-GEGHTTREVLMAVAEAAGKAPEVQPAP 269 (311)
T ss_dssp TSCCCEECEEEHHHHHHHHHHHHHHC---CEEEEESC-SCCEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred CCCCeEEeeEEHHHHHHHHHHHHhCC---CCEEEeCC-CCCccHHHHHHHHHHHhCCCCCceeCC
Confidence 77888899999999999999998765 78999985 789999999999999999887766544
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=146.45 Aligned_cols=173 Identities=16% Similarity=0.129 Sum_probs=133.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC----C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE----D 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~----~ 57 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++.+ ++|||. |+ |+... .
T Consensus 88 ~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~ 166 (352)
T 1sb8_A 88 GDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKV 166 (352)
T ss_dssp CCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBC
T ss_pred CCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCCCCCC
Confidence 689999999999999999999998642 456799999999999 999884 33 43221 1
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc----------cCCCCCCceEEEecCCcceee
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL----------LRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+.....|..+|..+|..+|++++. .+++++++||+.++++..... ......+..+.++++++..++
T Consensus 167 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 246 (352)
T 1sb8_A 167 EDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRD 246 (352)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEEC
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEe
Confidence 112224566788999999998864 489999999999988643211 000013345667788888999
Q ss_pred ecchhhHHHHHHHHhcCc-ccCCceeEeecCCCccCHHHHHHHHHHHh---CCceE
Q 038413 124 FNYEEDIAKCTIKVINDP-RTCNRIVIYRPQTNIISQLELISLWEQKT---GRSFK 175 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~-~~~~~~~~i~~~~~~~t~~e~~~~~~~~~---g~~~~ 175 (191)
+++++|+|++++.++.++ ...++.|++++ ++.+|+.|+++.+.+.+ |.+.+
T Consensus 247 ~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~g~~~~ 301 (352)
T 1sb8_A 247 FCYIENTVQANLLAATAGLDARNQVYNIAV-GGRTSLNQLFFALRDGLAENGVSYH 301 (352)
T ss_dssp CEEHHHHHHHHHHHHTCCGGGCSEEEEESC-SCCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred eEEHHHHHHHHHHHHhccccCCCceEEeCC-CCCccHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999998873 45689999985 78999999999999999 97654
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-19 Score=141.04 Aligned_cols=178 Identities=14% Similarity=0.196 Sum_probs=133.6
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.+ ++|||. |+ |+...
T Consensus 51 ~D~~~~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~~~~~ 129 (330)
T 2c20_A 51 GDLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEVDVDL 129 (330)
T ss_dssp CCTTCHHHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSCSSSS
T ss_pred CCCCCHHHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCCCCCC
Confidence 68999999999998 8999999998642 356789999999999 999884 43 33211
Q ss_pred -CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc-----------c----cCCCC-CCceEEEe
Q 038413 57 -DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV-----------L----LRPFE-PHDDVVVY 115 (191)
Q Consensus 57 -~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~-----------~----~~~~~-~~~~~~~~ 115 (191)
++.....|..+|..+|..+|++++. .+++++++||+.+++..... + ..... ....+.++
T Consensus 130 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (330)
T 2c20_A 130 ITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMF 209 (330)
T ss_dssp BCTTSCCCCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEE
T ss_pred CCcCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEe
Confidence 1112224566788999999998865 48999999999888753111 0 00001 22356666
Q ss_pred c------CCcceeeecchhhHHHHHHHHhcCccc--CCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 116 G------NGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 116 ~------~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
| +++..+++||++|+|++++.+++++.. .++.|++++ ++.+|+.|+++.+.+.+|.++++...+
T Consensus 210 g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 281 (330)
T 2c20_A 210 GDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGN-GNGFSVKEIVDAVREVTNHEIPAEVAP 281 (330)
T ss_dssp CSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCC-TTCBCHHHHHHHHHHHTTSCCCEEEEC
T ss_pred CCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCC-CCCccHHHHHHHHHHHhCCCCceeeCC
Confidence 6 577889999999999999999987532 368999985 789999999999999999887665443
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5e-20 Score=143.21 Aligned_cols=171 Identities=15% Similarity=0.219 Sum_probs=132.5
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC----C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE----D 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~----~ 57 (191)
+|+.|.+++.+++.++|+|||+++... +.++.+++++|++.+ ++|||. |+ ||... .
T Consensus 62 ~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 140 (337)
T 1r6d_A 62 GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWT 140 (337)
T ss_dssp CCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBC
T ss_pred cCCCCHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCCCCCC
Confidence 689999999999999999999998642 356789999999999 999884 33 44321 1
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--c----ccCCCCCCceEEEecCCcceeeecch
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--V----LLRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--~----~~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
+.....|..+|..+|..+|++++. .+++++++||+.++++... . +......+..+.++++++..++++++
T Consensus 141 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 220 (337)
T 1r6d_A 141 ESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHT 220 (337)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEH
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeH
Confidence 112224566788999999998764 5899999999998875421 1 11101134556778888888999999
Q ss_pred hhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 128 EDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
+|+|++++.++.++. .++.|++++ ++.+|+.|+++.+.+.+|++.
T Consensus 221 ~Dva~a~~~~~~~~~-~g~~~~v~~-~~~~s~~e~~~~i~~~~g~~~ 265 (337)
T 1r6d_A 221 DDHCRGIALVLAGGR-AGEIYHIGG-GLELTNRELTGILLDSLGADW 265 (337)
T ss_dssp HHHHHHHHHHHHHCC-TTCEEEECC-CCEEEHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHhCCC-CCCEEEeCC-CCCccHHHHHHHHHHHhCCCc
Confidence 999999999997653 578999995 789999999999999999864
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=9.9e-21 Score=149.54 Aligned_cols=175 Identities=14% Similarity=0.059 Sum_probs=132.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHc-CCccEEEc-CC---cccCC----
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVA-GNIKRFLP-SE---FGCEE---- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~-g~vkr~v~-s~---~g~~~---- 56 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++. + ++|||. |+ ||...
T Consensus 85 ~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~~~~~ 163 (377)
T 2q1s_A 85 TSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEKTFDDA 163 (377)
T ss_dssp SCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC-----------
T ss_pred CCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCCCCCCc
Confidence 689999999999999999999998653 35679999999999 8 999884 33 43211
Q ss_pred C--CCC---CC-CCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccc---------c------ccc----CCCC
Q 038413 57 D--RVR---PL-PPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFV---------N------VLL----RPFE 107 (191)
Q Consensus 57 ~--~~~---~~-~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~---------~------~~~----~~~~ 107 (191)
. +.. .. .|..+|..+|..+|+++++ .+++++++||+.++++.. . .+. ....
T Consensus 164 ~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 243 (377)
T 2q1s_A 164 KATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKAL 243 (377)
T ss_dssp ---CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHH
T ss_pred CcccccccccccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHH
Confidence 1 211 22 4556788999999998875 489999999999988643 1 110 0001
Q ss_pred CCceEEEecCCcceeeecchhhHHHH-HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEc
Q 038413 108 PHDDVVVYGNGEAKAVFNYEEDIAKC-TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 108 ~~~~~~~~~~g~~~~~~i~~~Dva~~-~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~ 179 (191)
.+..+.++++++..+++|+++|+|++ ++.++.++. .+ .|++++ ++.+|+.|+++.+.+.+|.+.++..+
T Consensus 244 ~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~-~g-~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~ 313 (377)
T 2q1s_A 244 KGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP-GG-VYNIAS-GKETSIADLATKINEITGNNTELDRL 313 (377)
T ss_dssp TTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT-TE-EEECCC-CCCEEHHHHHHHHHHHHTCCSCCCCC
T ss_pred cCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC-CC-eEEecC-CCceeHHHHHHHHHHHhCCCCCceeC
Confidence 34445567778888999999999999 999998865 45 899985 78999999999999999987655443
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.5e-20 Score=146.20 Aligned_cols=177 Identities=19% Similarity=0.192 Sum_probs=132.8
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC------------------cccHHHHHHHHHHcCCc-cEEEc-CC---cccC
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ------------------FLDQLKIVHAIKVAGNI-KRFLP-SE---FGCE 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~------------------~~~~~~li~aa~~~g~v-kr~v~-s~---~g~~ 55 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+ + +|||. |+ ||..
T Consensus 84 ~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~ 162 (404)
T 1i24_A 84 GDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTP 162 (404)
T ss_dssp SCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCC
T ss_pred CCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCC
Confidence 689999999999998 999999998642 345789999999998 7 58874 43 4422
Q ss_pred CC---CC--------------CCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc-------------
Q 038413 56 ED---RV--------------RPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV------------- 101 (191)
Q Consensus 56 ~~---~~--------------~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~------------- 101 (191)
.. +. ....|..+|..+|..+|.+++. .|++++++||+.++++....
T Consensus 163 ~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~ 242 (404)
T 1i24_A 163 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDY 242 (404)
T ss_dssp SSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCC
T ss_pred CCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccc
Confidence 10 00 1223456788999999988764 48999999999998864311
Q ss_pred ----------ccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCC--ceeEeecCCCccCHHHHHHHHHHH
Q 038413 102 ----------LLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCN--RIVIYRPQTNIISQLELISLWEQK 169 (191)
Q Consensus 102 ----------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~--~~~~i~~~~~~~t~~e~~~~~~~~ 169 (191)
+......++.+.+++++++.+++||++|+|++++.+++++...+ +.|+++ ++.+|+.|+++.+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~--~~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 243 DAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQF--TEQFSVNELASLVTKA 320 (404)
T ss_dssp STTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEEC--SEEEEHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEEC--CCCCcHHHHHHHHHHH
Confidence 00000134456678888889999999999999999998875445 789997 3789999999999998
Q ss_pred ---hCCceEEEEcC
Q 038413 170 ---TGRSFKRVHIS 180 (191)
Q Consensus 170 ---~g~~~~~~~~~ 180 (191)
+|.++++..+|
T Consensus 321 ~~~~g~~~~~~~~p 334 (404)
T 1i24_A 321 GSKLGLDVKKMTVP 334 (404)
T ss_dssp HHTTTCCCCEEEEC
T ss_pred HHhhCCCccccccC
Confidence 88887766554
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=3e-20 Score=144.75 Aligned_cols=178 Identities=13% Similarity=0.122 Sum_probs=133.7
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCcc-EEEc-CC---cccCC--
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIK-RFLP-SE---FGCEE-- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vk-r~v~-s~---~g~~~-- 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+ ++ |||. |+ ||...
T Consensus 57 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~ 135 (347)
T 1orr_A 57 GDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQY 135 (347)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTS
T ss_pred cCCCCHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcC
Confidence 689999999999998 999999998642 356789999999999 86 8874 33 44211
Q ss_pred ------------------CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc---------ccCC
Q 038413 57 ------------------DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV---------LLRP 105 (191)
Q Consensus 57 ------------------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~---------~~~~ 105 (191)
.+.....|...|..+|..+|+++++ .|++++++||+.+++..... +...
T Consensus 136 ~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~ 215 (347)
T 1orr_A 136 KYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQK 215 (347)
T ss_dssp CEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHH
T ss_pred CcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHH
Confidence 1111123566788999999998875 38999999999998864211 0000
Q ss_pred CCCCc-----eEEEecCCcceeeecchhhHHHHHHHHhcCc-ccCCceeEeecCCC--ccCHHHHHHHHHHHhCCceEEE
Q 038413 106 FEPHD-----DVVVYGNGEAKAVFNYEEDIAKCTIKVINDP-RTCNRIVIYRPQTN--IISQLELISLWEQKTGRSFKRV 177 (191)
Q Consensus 106 ~~~~~-----~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~-~~~~~~~~i~~~~~--~~t~~e~~~~~~~~~g~~~~~~ 177 (191)
...+. .+.++++|++.+++++++|+|++++.++.++ ...++.|++++ ++ .+|+.|+++.+.+.+|.+.++.
T Consensus 216 ~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~-~~~~~~s~~e~~~~i~~~~g~~~~~~ 294 (347)
T 1orr_A 216 AVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGG-TIVNSLSLLELFKLLEDYCNIDMRFT 294 (347)
T ss_dssp HHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESS-CGGGEEEHHHHHHHHHHHHTCCCCEE
T ss_pred HHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCC-CCCCCccHHHHHHHHHHHhCCCCCce
Confidence 01122 5677888889999999999999999999873 34578999985 55 4999999999999999887665
Q ss_pred EcC
Q 038413 178 HIS 180 (191)
Q Consensus 178 ~~~ 180 (191)
.+|
T Consensus 295 ~~~ 297 (347)
T 1orr_A 295 NLP 297 (347)
T ss_dssp EEC
T ss_pred eCC
Confidence 544
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7.9e-20 Score=145.04 Aligned_cols=178 Identities=16% Similarity=0.209 Sum_probs=131.8
Q ss_pred CCCCCHHHHHHhhc--c-CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC--
Q 038413 1 GELDEHEKIVSILK--E-VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE-- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g-~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~-- 56 (191)
+|+.|.+++.++++ + +|+|||+++... +.++.+++++|++.+ ++|||. |+ |+...
T Consensus 76 ~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~ 154 (397)
T 1gy8_A 76 GDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMG 154 (397)
T ss_dssp SCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-
T ss_pred CCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCcc
Confidence 58999999999998 7 999999998653 356789999999999 999884 33 43221
Q ss_pred ---------CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc-----------c----cc-----
Q 038413 57 ---------DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN-----------V----LL----- 103 (191)
Q Consensus 57 ---------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~-----------~----~~----- 103 (191)
.+.....|...|..+|..+|.+++. .+++++++||+.+++.... . +.
T Consensus 155 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 234 (397)
T 1gy8_A 155 SVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMS 234 (397)
T ss_dssp ----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHH
T ss_pred cccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHH
Confidence 1111123456788999999998875 4899999999998875321 0 00
Q ss_pred CCCCCC-----------ceEEEec------CCcceeeecchhhHHHHHHHHhcCcccC-----C---ceeEeecCCCccC
Q 038413 104 RPFEPH-----------DDVVVYG------NGEAKAVFNYEEDIAKCTIKVINDPRTC-----N---RIVIYRPQTNIIS 158 (191)
Q Consensus 104 ~~~~~~-----------~~~~~~~------~g~~~~~~i~~~Dva~~~~~~l~~~~~~-----~---~~~~i~~~~~~~t 158 (191)
...... ..+.+++ +++..+++||++|+|++++.+++++... + +.|++++ ++.+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~-~~~~s 313 (397)
T 1gy8_A 235 DIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT-SRGYS 313 (397)
T ss_dssp HHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESC-SCCEE
T ss_pred HHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCC-CCccc
Confidence 100111 2466776 6778899999999999999999875432 3 7899985 78999
Q ss_pred HHHHHHHHHHHhCCceEEEEcC
Q 038413 159 QLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 159 ~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
+.|+++.+.+.+|+++++...+
T Consensus 314 ~~e~~~~i~~~~g~~~~~~~~~ 335 (397)
T 1gy8_A 314 VREVIEVARKTTGHPIPVRECG 335 (397)
T ss_dssp HHHHHHHHHHHHCCCCCEEEEC
T ss_pred HHHHHHHHHHHhCCCCCeeeCC
Confidence 9999999999999887665543
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.83 E-value=6.5e-20 Score=144.01 Aligned_cols=176 Identities=14% Similarity=0.120 Sum_probs=135.6
Q ss_pred CCCCCHHHHHHh-hccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC---CC
Q 038413 1 GELDEHEKIVSI-LKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED---RV 59 (191)
Q Consensus 1 gD~~d~~~l~~a-~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~---~~ 59 (191)
+|+.|.+++.++ +.++|+|||+++... +.++.+++++|++.+ ++ ||. |+ ||.... +.
T Consensus 75 ~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~~~~E~ 152 (362)
T 3sxp_A 75 ADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKAPNVVG 152 (362)
T ss_dssp CCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCSSBCTT
T ss_pred CCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCCCCCCC
Confidence 699999999999 789999999998542 467899999999999 88 763 33 443221 12
Q ss_pred CCCCCchhhHHHHHHHHHHHHhcC--CCeEEEecccccccccccc----------cCCCCCCceEEEecCCcceeeecch
Q 038413 60 RPLPPFEAYLEKKRIVRRAIEAVE--IPYTFVSANCYGAYFVNVL----------LRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 60 ~~~~~~~~~~~~k~~~e~~l~~~~--~~~tilrp~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
....|..+|..+|..+|++++... ++++++||+.+++++.... ......+..+.++++++..++++++
T Consensus 153 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 232 (362)
T 3sxp_A 153 KNESPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYI 232 (362)
T ss_dssp SCCCCSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEH
T ss_pred CCCCCCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEH
Confidence 223566778899999999998754 8899999998887643211 0011145566777888888999999
Q ss_pred hhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHH
Q 038413 128 EDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEE 182 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 182 (191)
+|+|++++.++.++. .+ .|++++ ++.+|+.|+++.+.+.+| +.++...|..
T Consensus 233 ~Dva~ai~~~~~~~~-~g-~~~i~~-~~~~s~~e~~~~i~~~~g-~~~~~~~~~~ 283 (362)
T 3sxp_A 233 EDVIQANVKAMKAQK-SG-VYNVGY-SQARSYNEIVSILKEHLG-DFKVTYIKNP 283 (362)
T ss_dssp HHHHHHHHHHTTCSS-CE-EEEESC-SCEEEHHHHHHHHHHHHC-CCEEECCC--
T ss_pred HHHHHHHHHHHhcCC-CC-EEEeCC-CCCccHHHHHHHHHHHcC-CCceEECCCC
Confidence 999999999999875 34 899985 799999999999999999 8777766643
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.2e-20 Score=141.32 Aligned_cols=177 Identities=11% Similarity=0.081 Sum_probs=134.7
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHc-CCccEEEc-CC---cccC---
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVA-GNIKRFLP-SE---FGCE--- 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~-g~vkr~v~-s~---~g~~--- 55 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++. + ++|||. |+ ||..
T Consensus 58 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~~iv~~SS~~v~g~~~~~ 136 (321)
T 2pk3_A 58 LDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNL-DCRILTIGSSEEYGMILPE 136 (321)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEEEEGGGTBSCCGG
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEccHHhcCCCCCC
Confidence 699999999999986 899999998643 34578999999876 6 889884 33 4432
Q ss_pred ---CCCCCCCCCchhhHHHHHHHHHHHHhc----CCCeEEEeccccccccccc------ccCCCCC---C--ceEEEecC
Q 038413 56 ---EDRVRPLPPFEAYLEKKRIVRRAIEAV----EIPYTFVSANCYGAYFVNV------LLRPFEP---H--DDVVVYGN 117 (191)
Q Consensus 56 ---~~~~~~~~~~~~~~~~k~~~e~~l~~~----~~~~tilrp~~~~~~~~~~------~~~~~~~---~--~~~~~~~~ 117 (191)
.++.....|..+|..+|..+|.+++.. |++++++||+.++++.... +...... + ..+.++++
T Consensus 137 ~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 216 (321)
T 2pk3_A 137 ESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGN 216 (321)
T ss_dssp GCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESC
T ss_pred CCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCC
Confidence 111112235567889999999998763 8999999999988864321 1100001 2 35667788
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
++..+++++++|+|++++.++.++ ..++.|++++ ++.+|+.|+++.+.+.+|.+.++...|
T Consensus 217 ~~~~~~~v~v~Dva~a~~~~~~~~-~~g~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~p 277 (321)
T 2pk3_A 217 LEAVRDFTDVRDIVQAYWLLSQYG-KTGDVYNVCS-GIGTRIQDVLDLLLAMANVKIDTELNP 277 (321)
T ss_dssp SSCEEEEEEHHHHHHHHHHHHHHC-CTTCEEEESC-SCEEEHHHHHHHHHHHSSSCCEEEECG
T ss_pred CCcEEeeEEHHHHHHHHHHHHhCC-CCCCeEEeCC-CCCeeHHHHHHHHHHHhCCCCceeecc
Confidence 888899999999999999999876 3478999985 789999999999999999987776655
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8.9e-20 Score=142.30 Aligned_cols=178 Identities=16% Similarity=0.251 Sum_probs=131.7
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.+ ++|||. |+ ||...
T Consensus 65 ~D~~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~ 143 (348)
T 1ek6_A 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLP 143 (348)
T ss_dssp CCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSS
T ss_pred CCCCCHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCCCCC
Confidence 68999999999998 8999999998642 356789999999999 999884 33 44211
Q ss_pred -CCCCCCCC-chhhHHHHHHHHHHHHh---cC--CCeEEEecccccccccc------------ccc----CCCC-CCceE
Q 038413 57 -DRVRPLPP-FEAYLEKKRIVRRAIEA---VE--IPYTFVSANCYGAYFVN------------VLL----RPFE-PHDDV 112 (191)
Q Consensus 57 -~~~~~~~~-~~~~~~~k~~~e~~l~~---~~--~~~tilrp~~~~~~~~~------------~~~----~~~~-~~~~~ 112 (191)
++.....| ..+|..+|..+|.+++. .+ ++++++||+.+++.... .+. .... ....+
T Consensus 144 ~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (348)
T 1ek6_A 144 LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREAL 223 (348)
T ss_dssp BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCE
T ss_pred cCCCCCCCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCe
Confidence 11112234 56788999999998865 24 99999999988875210 000 0001 33456
Q ss_pred EEec------CCcceeeecchhhHHHHHHHHhcCcc-cCC-ceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 113 VVYG------NGEAKAVFNYEEDIAKCTIKVINDPR-TCN-RIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 113 ~~~~------~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~-~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
.+++ +|+..+++||++|+|++++.+++++. ..+ +.|++++ ++.+|+.|+++.+.+.+|.++++..+|
T Consensus 224 ~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 298 (348)
T 1ek6_A 224 NVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGT-GTGYSVLQMVQAMEKASGKKIPYKVVA 298 (348)
T ss_dssp EEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECC-SCCEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred EEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCC-CCCccHHHHHHHHHHHhCCCCceeeCC
Confidence 6666 56788999999999999999998753 334 8999985 789999999999999999887665543
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.6e-20 Score=136.33 Aligned_cols=152 Identities=17% Similarity=0.228 Sum_probs=120.8
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCC-----------CcccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhh
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYP-----------QFLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAY 68 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~-----------~~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~ 68 (191)
+|++ +++.+++.++|+|||+++.. ++.++.+++++|++.+ ++|||. |+++........ .+...|
T Consensus 72 ~Dl~--~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~-~~~~~Y 147 (236)
T 3e8x_A 72 ANLE--EDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPDQGP-MNMRHY 147 (236)
T ss_dssp CCTT--SCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGGGSC-GGGHHH
T ss_pred cccH--HHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCCCCh-hhhhhH
Confidence 4666 67788899999999999865 2567899999999999 999885 777654332111 245678
Q ss_pred HHHHHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCcee
Q 038413 69 LEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIV 148 (191)
Q Consensus 69 ~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~ 148 (191)
..+|..+|+++++.+++++++||++++++. ..+.+...+.+..+.++++++|+|++++.++.++...++.+
T Consensus 148 ~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~---------~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~ 218 (236)
T 3e8x_A 148 LVAKRLADDELKRSSLDYTIVRPGPLSNEE---------STGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTF 218 (236)
T ss_dssp HHHHHHHHHHHHHSSSEEEEEEECSEECSC---------CCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCcccCCC---------CCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeE
Confidence 899999999999999999999999998853 22344445555566899999999999999999987778999
Q ss_pred EeecCCCccCHHHHHHHHH
Q 038413 149 IYRPQTNIISQLELISLWE 167 (191)
Q Consensus 149 ~i~~~~~~~t~~e~~~~~~ 167 (191)
++++ + ..|+.|+++.++
T Consensus 219 ~v~~-~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 219 EVLN-G-DTPIAKVVEQLG 235 (236)
T ss_dssp EEEE-C-SEEHHHHHHTC-
T ss_pred EEeC-C-CcCHHHHHHHhc
Confidence 9985 4 699999998765
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.7e-20 Score=140.56 Aligned_cols=169 Identities=12% Similarity=0.106 Sum_probs=128.8
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC--------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ--------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED--- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~--- 57 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.| ++|||. |+ |+....
T Consensus 52 ~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~ 130 (312)
T 2yy7_A 52 VNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPKEN 130 (312)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSCSSS
T ss_pred ecCCCHHHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCCCCC
Confidence 68999999999998 8999999998642 356789999999999 999885 33 443211
Q ss_pred --CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccc-cc------cc---CCCCCCceEEEecCCcce
Q 038413 58 --RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFV-NV------LL---RPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 58 --~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~-~~------~~---~~~~~~~~~~~~~~g~~~ 121 (191)
+.....|..+|..+|..+|++++. .+++++++||+.++++.. +. .. ......+.+..+++++..
T Consensus 131 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (312)
T 2yy7_A 131 TPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETK 210 (312)
T ss_dssp BCSSCBCCCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCC
T ss_pred ccccCcCCCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCce
Confidence 111124566788999999988764 489999999999888431 11 00 001134566777788888
Q ss_pred eeecchhhHHHHHHHHhcCccc---CCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 122 AVFNYEEDIAKCTIKVINDPRT---CNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~---~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
++++|++|+|++++.+++++.. .++.|+++ ++.+|+.|+++.+.+.+|.
T Consensus 211 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~--~~~~s~~e~~~~i~~~~~~ 262 (312)
T 2yy7_A 211 MPMMYMDDAIDATINIMKAPVEKIKIHSSYNLA--AMSFTPTEIANEIKKHIPE 262 (312)
T ss_dssp EEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECC--SEEECHHHHHHHHHTTCTT
T ss_pred eeeeeHHHHHHHHHHHHhCcccccccCceEEeC--CCccCHHHHHHHHHHHCCC
Confidence 9999999999999999988653 24889997 4899999999999999994
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-20 Score=144.91 Aligned_cols=168 Identities=13% Similarity=0.112 Sum_probs=113.3
Q ss_pred CCCCCHHHHHHhhcc-----CcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC--
Q 038413 1 GELDEHEKIVSILKE-----VDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE-- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-----~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~-- 56 (191)
+|+.|.+.+.+++++ +|+|||+++... +.++.+++++|++.| + |||. |+ ||...
T Consensus 49 ~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~ 126 (310)
T 1eq2_A 49 DYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSD 126 (310)
T ss_dssp EEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSC
T ss_pred cccccHHHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCC
Confidence 477788889998876 999999998642 345789999999999 8 8774 33 43321
Q ss_pred --CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc------ccc----CCCCCCceEEEecCCcc
Q 038413 57 --DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN------VLL----RPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 57 --~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~------~~~----~~~~~~~~~~~~~~g~~ 120 (191)
.+.....|..+|..+|..+|+++++ .|++++++||+.++++... .+. .....++.+.++++++.
T Consensus 127 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 206 (310)
T 1eq2_A 127 FIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSEN 206 (310)
T ss_dssp BCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC------------
T ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCc
Confidence 1111224566788999999999875 4799999999999886432 110 00013445566777888
Q ss_pred -eeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 121 -KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 121 -~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
.++++|++|+|++++.++.++. ++.|++++ ++.+|+.|+++.+.+.+|.+
T Consensus 207 ~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 207 FKRDFVYVGDVADVNLWFLENGV--SGIFNLGT-GRAESFQAVADATLAYHKKG 257 (310)
T ss_dssp -CBCEEEHHHHHHHHHHHHHHCC--CEEEEESC-SCCBCHHHHHHHC-------
T ss_pred ceEccEEHHHHHHHHHHHHhcCC--CCeEEEeC-CCccCHHHHHHHHHHHcCCC
Confidence 8999999999999999998775 78999985 78999999999999999987
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-19 Score=136.94 Aligned_cols=173 Identities=17% Similarity=0.153 Sum_probs=131.9
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.| + |||. |+ |+...
T Consensus 47 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~~ 124 (292)
T 1vl0_A 47 LDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKEP 124 (292)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSSC
T ss_pred CCCCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCCC
Confidence 69999999999998 7999999998643 345789999999999 8 7763 43 33221
Q ss_pred -CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEeccccccccccccc----CCCCCCceEEEecCCcceeeecchhhHH
Q 038413 57 -DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLL----RPFEPHDDVVVYGNGEAKAVFNYEEDIA 131 (191)
Q Consensus 57 -~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~i~~~Dva 131 (191)
.+.....|..+|..+|..+|+++++.+.+++++||+.++++ ...+. .....+..+.+++ +..+++++++|+|
T Consensus 125 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva 201 (292)
T 1vl0_A 125 ITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLA 201 (292)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHH
T ss_pred CCCCCCCCCccHHHHHHHHHHHHHHhhCCCeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHH
Confidence 11122245667889999999999988889999999999865 22111 1001234455554 4678999999999
Q ss_pred HHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCH
Q 038413 132 KCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISE 181 (191)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~ 181 (191)
++++.++.++ .++.|++++ ++.+|+.|+++.+.+.+|++.++..+|.
T Consensus 202 ~~~~~~~~~~--~~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 248 (292)
T 1vl0_A 202 RVVLKVIDEK--NYGTFHCTC-KGICSWYDFAVEIFRLTGIDVKVTPCTT 248 (292)
T ss_dssp HHHHHHHHHT--CCEEEECCC-BSCEEHHHHHHHHHHHHCCCCEEEEECS
T ss_pred HHHHHHHhcC--CCcEEEecC-CCCccHHHHHHHHHHHhCCCCceeeccc
Confidence 9999999876 578999985 6899999999999999999877766654
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.2e-20 Score=134.23 Aligned_cols=155 Identities=18% Similarity=0.113 Sum_probs=111.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCC---------CcccHHHHHHHHHHcCCccEEEc-CCcccCC---C---CCCCCCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYP---------QFLDQLKIVHAIKVAGNIKRFLP-SEFGCEE---D---RVRPLPP 64 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~---------~~~~~~~li~aa~~~g~vkr~v~-s~~g~~~---~---~~~~~~~ 64 (191)
+|+.|.+++.++++++|+|||+++.. +..++.+++++|+++| ++|||. |+.+... . ......|
T Consensus 53 ~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p 131 (227)
T 3dhn_A 53 ADVSSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLRLMDSGEVP 131 (227)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEEGGGTTCSC
T ss_pred ecCCCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCccccCCcch
Confidence 69999999999999999999999865 2567899999999999 999885 4432211 0 1112245
Q ss_pred chhhHHHHHHHHHHHH----hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcC
Q 038413 65 FEAYLEKKRIVRRAIE----AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~----~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~ 140 (191)
...|..+|...|.+++ +.+++|+++||+.++++..... ...... ...+. .++ .+++++++|+|++++.++++
T Consensus 132 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~-~~~~~-~~~-~~~~i~~~Dva~ai~~~l~~ 207 (227)
T 3dhn_A 132 ENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTG-RYRLGK-DDMIV-DIV-GNSHISVEDYAAAMIDELEH 207 (227)
T ss_dssp GGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCC-CCEEES-SBCCC-CTT-SCCEEEHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccc-ceeecC-CCccc-CCC-CCcEEeHHHHHHHHHHHHhC
Confidence 6678889999995554 3689999999999887643211 110011 11111 122 27999999999999999999
Q ss_pred cccCCceeEeecCCCccCHHH
Q 038413 141 PRTCNRIVIYRPQTNIISQLE 161 (191)
Q Consensus 141 ~~~~~~~~~i~~~~~~~t~~e 161 (191)
++..++.+++++ ++..++++
T Consensus 208 ~~~~g~~~~~~~-~~~~~~~~ 227 (227)
T 3dhn_A 208 PKHHQERFTIGY-LEHHHHHH 227 (227)
T ss_dssp CCCCSEEEEEEC-CSCCC---
T ss_pred ccccCcEEEEEe-ehhcccCC
Confidence 988899999996 78887753
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=140.52 Aligned_cols=170 Identities=15% Similarity=0.211 Sum_probs=129.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC-----
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE----- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~----- 56 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++.| + |||. |+ ||...
T Consensus 61 ~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~ 138 (348)
T 1oc2_A 61 GDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDL 138 (348)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGS
T ss_pred CCCCCHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccc
Confidence 689999999999999999999998642 356799999999999 8 7763 43 44321
Q ss_pred -----------CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--cc----cCCCCCCceEEEe
Q 038413 57 -----------DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--VL----LRPFEPHDDVVVY 115 (191)
Q Consensus 57 -----------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--~~----~~~~~~~~~~~~~ 115 (191)
.+.....|..+|..+|..+|.+++. .+++++++||+.+++.... .+ ......+..+.++
T Consensus 139 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (348)
T 1oc2_A 139 PGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLY 218 (348)
T ss_dssp TTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEE
T ss_pred cccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEe
Confidence 1111223556788999999998865 4899999999998876432 11 0000133456677
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
++++..+++++++|+|++++.++.++. .++.|++++ ++.+|+.|+++.+.+.+|++.
T Consensus 219 ~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~~~~i~~-~~~~s~~e~~~~i~~~~g~~~ 275 (348)
T 1oc2_A 219 GEGKNVRDWIHTNDHSTGVWAILTKGR-MGETYLIGA-DGEKNNKEVLELILEKMGQPK 275 (348)
T ss_dssp TTSCCEEECEEHHHHHHHHHHHHHHCC-TTCEEEECC-SCEEEHHHHHHHHHHHTTCCT
T ss_pred cCCCceEeeEEHHHHHHHHHHHhhCCC-CCCeEEeCC-CCCCCHHHHHHHHHHHhCCCc
Confidence 888888999999999999999997653 578999985 789999999999999999763
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-19 Score=131.27 Aligned_cols=150 Identities=13% Similarity=0.184 Sum_probs=117.1
Q ss_pred CCCCC-HHHHHHhhccCcEEEEccCCC-------CcccHHHHHHHHHHcCCccEEEc-CCcccCCCCCC---CCCCchhh
Q 038413 1 GELDE-HEKIVSILKEVDVVISTVAYP-------QFLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVR---PLPPFEAY 68 (191)
Q Consensus 1 gD~~d-~~~l~~a~~g~d~V~~~~~~~-------~~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~---~~~~~~~~ 68 (191)
+|+.| .+++.++++++|+|||+++.. +..++.+++++|++.+ ++|||. |+.+....... ...|...|
T Consensus 48 ~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y 126 (219)
T 3dqp_A 48 FDVDWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPEKWIGAGFDALKDY 126 (219)
T ss_dssp CCTTSCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGGGCCSHHHHHTHHH
T ss_pred ecccCCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCCcccccccccccHH
Confidence 69999 999999999999999999865 3567899999999999 999884 54332211110 01134568
Q ss_pred HHHHHHHHHHH-HhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCce
Q 038413 69 LEKKRIVRRAI-EAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRI 147 (191)
Q Consensus 69 ~~~k~~~e~~l-~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~ 147 (191)
..+|..+|+++ +..+++|+++||+.++++.. .+.+.+ ++.++++++++|+|++++.++.++...++.
T Consensus 127 ~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~~~---------~~~~~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~ 194 (219)
T 3dqp_A 127 YIAKHFADLYLTKETNLDYTIIQPGALTEEEA---------TGLIDI---NDEVSASNTIGDVADTIKELVMTDHSIGKV 194 (219)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEEEECSEECSCC---------CSEEEE---SSSCCCCEEHHHHHHHHHHHHTCGGGTTEE
T ss_pred HHHHHHHHHHHHhccCCcEEEEeCceEecCCC---------CCcccc---CCCcCCcccHHHHHHHHHHHHhCccccCcE
Confidence 89999999999 77899999999999987531 122222 256689999999999999999998777999
Q ss_pred eEeecCCCccCHHHHHHH
Q 038413 148 VIYRPQTNIISQLELISL 165 (191)
Q Consensus 148 ~~i~~~~~~~t~~e~~~~ 165 (191)
+++++ + ..++.|+.+.
T Consensus 195 ~~i~~-g-~~~~~e~~~~ 210 (219)
T 3dqp_A 195 ISMHN-G-KTAIKEALES 210 (219)
T ss_dssp EEEEE-C-SEEHHHHHHT
T ss_pred EEeCC-C-CccHHHHHHH
Confidence 99984 4 5999998764
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-20 Score=147.32 Aligned_cols=167 Identities=13% Similarity=0.097 Sum_probs=129.8
Q ss_pred CCC-CCHHHHHHhhccCcEEEEccCCC-----------CcccHHHHHHHHHHcCCcc-EEEc-CCcccCCCCCCCCCCch
Q 038413 1 GEL-DEHEKIVSILKEVDVVISTVAYP-----------QFLDQLKIVHAIKVAGNIK-RFLP-SEFGCEEDRVRPLPPFE 66 (191)
Q Consensus 1 gD~-~d~~~l~~a~~g~d~V~~~~~~~-----------~~~~~~~li~aa~~~g~vk-r~v~-s~~g~~~~~~~~~~~~~ 66 (191)
+|+ .|.+++.++++++|+|||+++.. +..++.+++++|+++| ++ |||. |+.+... ..
T Consensus 31 ~d~~~d~~~l~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~--------~~ 101 (369)
T 3st7_A 31 VHRQTKEEELESALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ--------DN 101 (369)
T ss_dssp CCTTCCHHHHHHHHHHCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS--------CS
T ss_pred ECCCCCHHHHHHHhccCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC--------CC
Confidence 467 79999999999999999999864 2567899999999999 88 8885 4433221 34
Q ss_pred hhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc--------ccCCCCCCceEEEecCCcceeeecchhhHHHHH
Q 038413 67 AYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV--------LLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCT 134 (191)
Q Consensus 67 ~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~ 134 (191)
+|..+|..+|+++++ .+++++++||+.+++.+... +......+..+.+ ++++.++++++++|+|+++
T Consensus 102 ~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~ 180 (369)
T 3st7_A 102 PYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEI 180 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHH
Confidence 688899999999876 69999999999998864321 1100012233333 4678889999999999999
Q ss_pred HHHhcCcccC-CceeEeecCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 135 IKVINDPRTC-NRIVIYRPQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 135 ~~~l~~~~~~-~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
+.++.++... ++.+++++ ++.+|+.|+++.+++.+|++.++..
T Consensus 181 ~~~l~~~~~~~~~~~~i~~-~~~~s~~e~~~~~~~~~g~~~~~~~ 224 (369)
T 3st7_A 181 KRAIEGTPTIENGVPTVPN-VFKVTLGEIVDLLYKFKQSRLDRTL 224 (369)
T ss_dssp HHHHHTCCCEETTEECCSC-CEEEEHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHhCCcccCCceEEeCC-CCceeHHHHHHHHHHHhCCCccccc
Confidence 9999987654 78999985 7899999999999999998755443
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=138.88 Aligned_cols=168 Identities=14% Similarity=0.119 Sum_probs=127.9
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.| + |||. |+ |+...
T Consensus 38 ~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~~ 115 (299)
T 1n2s_A 38 GDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIP 115 (299)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCC
T ss_pred ccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCCC
Confidence 689999999999987 999999998643 356799999999999 8 6663 33 44321
Q ss_pred -CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEeccccccccccccc----CCCCCCceEEEecCCcceeeecchhhHH
Q 038413 57 -DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLL----RPFEPHDDVVVYGNGEAKAVFNYEEDIA 131 (191)
Q Consensus 57 -~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~i~~~Dva 131 (191)
.+.....|..+|..+|..+|+++++...+++++||+.+++.....+. .....+..+.+++ +..++++|++|+|
T Consensus 116 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva 193 (299)
T 1n2s_A 116 WQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLA 193 (299)
T ss_dssp BCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHH
T ss_pred CCCCCCCCCccHHHHHHHHHHHHHHHhCCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHH
Confidence 11222345667889999999999987789999999999886432211 1011334555554 4679999999999
Q ss_pred HHHHHHhcCcc--c-CCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 132 KCTIKVINDPR--T-CNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 132 ~~~~~~l~~~~--~-~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
++++.+++++. . .++.|++++ ++.+|+.|+++.+.+.+|++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~e~~~~i~~~~g~~ 237 (299)
T 1n2s_A 194 DCTAHAIRVALNKPEVAGLYHLVA-GGTTTWHDYAALVFDEARKA 237 (299)
T ss_dssp HHHHHHHHHHHHCGGGCEEEECCC-BSCEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCceEEEeC-CCCCCHHHHHHHHHHHhCCC
Confidence 99999998763 2 478999985 68999999999999999976
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.9e-19 Score=139.23 Aligned_cols=177 Identities=14% Similarity=0.177 Sum_probs=128.3
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+.++|||. |+ ||...
T Consensus 64 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~ 143 (357)
T 1rkx_A 64 GDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIW 143 (357)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSS
T ss_pred ccccCHHHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCC
Confidence 689999999999987 899999998532 4567899999998754788874 43 43221
Q ss_pred --CCCCCCCCchhhHHHHHHHHHHHHhc-------------CCCeEEEecccccccccc-------cccCCCCCCceEEE
Q 038413 57 --DRVRPLPPFEAYLEKKRIVRRAIEAV-------------EIPYTFVSANCYGAYFVN-------VLLRPFEPHDDVVV 114 (191)
Q Consensus 57 --~~~~~~~~~~~~~~~k~~~e~~l~~~-------------~~~~tilrp~~~~~~~~~-------~~~~~~~~~~~~~~ 114 (191)
.+.....|..+|..+|..+|++++.. |++++++||+.+++.... .+......+..+.
T Consensus 144 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~- 222 (357)
T 1rkx_A 144 GYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVI- 222 (357)
T ss_dssp CBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEE-
T ss_pred CCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEE-
Confidence 11112235667889999999988652 899999999999985421 1111001333444
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcC----cccCCceeEeecC-CCccCHHHHHHHHHHHhCCceEEEE
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVIND----PRTCNRIVIYRPQ-TNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~----~~~~~~~~~i~~~-~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
.++++..+++||++|+|++++.++.. +...++.|+++++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 223 ~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~ 291 (357)
T 1rkx_A 223 IRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL 291 (357)
T ss_dssp CSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC
T ss_pred ECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcccc
Confidence 34567789999999999999998874 2345789999842 3689999999999999998766543
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=141.67 Aligned_cols=176 Identities=11% Similarity=0.116 Sum_probs=131.7
Q ss_pred CCCCCHHHHHHhhc-----cCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC-
Q 038413 1 GELDEHEKIVSILK-----EVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~-----g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~- 57 (191)
+|+.|.+.+.++++ ++|+|||+++... +.++.+++++|++.| + |||. |+ ||....
T Consensus 96 ~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~ 173 (357)
T 2x6t_A 96 DYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSD 173 (357)
T ss_dssp EEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSC
T ss_pred eecCcHHHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCC
Confidence 46778888988887 5999999998642 356789999999999 8 8773 33 443211
Q ss_pred ---CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc------ccc----CCCCCCceEEEecCCcc
Q 038413 58 ---RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN------VLL----RPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 58 ---~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~------~~~----~~~~~~~~~~~~~~g~~ 120 (191)
+.....|..+|..+|..+|++++. .+++++++||+.++++... .+. .....+..+.++++++.
T Consensus 174 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (357)
T 2x6t_A 174 FIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSEN 253 (357)
T ss_dssp CCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGG
T ss_pred CcCCcCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCc
Confidence 111123566788999999998875 4799999999999876422 110 00013445667778888
Q ss_pred -eeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc-eEEEEcCH
Q 038413 121 -KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS-FKRVHISE 181 (191)
Q Consensus 121 -~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~-~~~~~~~~ 181 (191)
.+++++++|+|++++.+++++. ++.|++++ ++.+|+.|+++.+.+.+|.+ +++...+.
T Consensus 254 ~~~~~i~v~Dva~ai~~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 313 (357)
T 2x6t_A 254 FKRDFVYVGDVADVNLWFLENGV--SGIFNLGT-GRAESFQAVADATLAYHKKGQIEYIPFPD 313 (357)
T ss_dssp CEECEEEHHHHHHHHHHHHHHCC--CEEEEESC-SCCEEHHHHHHHHHHHHTCCCCEEECCCG
T ss_pred ceEccEEHHHHHHHHHHHHhcCC--CCeEEecC-CCcccHHHHHHHHHHHcCCCCceecCCCc
Confidence 8999999999999999998765 78999985 78999999999999999987 55555443
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.6e-19 Score=136.73 Aligned_cols=171 Identities=15% Similarity=0.193 Sum_probs=128.3
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCc-cEEEc-CC---cccCC----
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNI-KRFLP-SE---FGCEE---- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~v-kr~v~-s~---~g~~~---- 56 (191)
+|+.|.+++.+++.++|+|||+++... +.++.+++++|++.+ + +|||. |+ ||...
T Consensus 61 ~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~ 139 (336)
T 2hun_A 61 GDVADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRREN-PEVRFVHVSTDEVYGDILKGSF 139 (336)
T ss_dssp CCTTCHHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCCCSSSCB
T ss_pred cCCCCHHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEeccHHHHCCCCCCCc
Confidence 689999999999999999999998642 356789999999987 5 68774 33 44321
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--c----ccCCCCCCceEEEecCCcceeeecc
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--V----LLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--~----~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
++.....|..+|..+|..+|.++++ .+++++++||+.+++.... . +......+..+.++++++..+++++
T Consensus 140 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 219 (336)
T 2hun_A 140 TENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLY 219 (336)
T ss_dssp CTTBCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEE
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEE
Confidence 1111224556788999999998864 5899999999998876431 1 1100113456777888888899999
Q ss_pred hhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 127 EEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
++|+|++++.++.++. .++.|++++ ++.+|+.|+++.+.+.+|.+.
T Consensus 220 v~Dva~~~~~~~~~~~-~g~~~~v~~-~~~~s~~e~~~~i~~~~g~~~ 265 (336)
T 2hun_A 220 VEDHVRAIELVLLKGE-SREIYNISA-GEEKTNLEVVKIILRLMGKGE 265 (336)
T ss_dssp HHHHHHHHHHHHHHCC-TTCEEEECC-SCEECHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHhCCC-CCCEEEeCC-CCcccHHHHHHHHHHHhCCCc
Confidence 9999999999987653 578999995 788999999999999999863
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=6e-19 Score=136.90 Aligned_cols=170 Identities=13% Similarity=0.127 Sum_probs=127.8
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCc-cEEEc-CC---cccCC--
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNI-KRFLP-SE---FGCEE-- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~v-kr~v~-s~---~g~~~-- 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+ + +|||. |+ ||...
T Consensus 70 ~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~~ 148 (335)
T 1rpn_A 70 GDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAE 148 (335)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSS
T ss_pred CCCCCHHHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCCC
Confidence 689999999999986 599999998642 346789999999998 8 88874 33 44321
Q ss_pred --CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc-c--------cCCCCCCc-eEEEecCCcc
Q 038413 57 --DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV-L--------LRPFEPHD-DVVVYGNGEA 120 (191)
Q Consensus 57 --~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~-~--------~~~~~~~~-~~~~~~~g~~ 120 (191)
.+.....|..+|..+|..+|.++++ .+++++++||+..+++.... + ......+. ....+++++.
T Consensus 149 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~ 228 (335)
T 1rpn_A 149 RQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDA 228 (335)
T ss_dssp SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTC
T ss_pred CCCcccCCCCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcc
Confidence 1222234566788999999998875 48999999998877753211 1 00001222 3345678888
Q ss_pred eeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
.++++|++|+|++++.+++++. ++.|++++ ++.+|+.|+++.+.+.+|.+.
T Consensus 229 ~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~ 279 (335)
T 1rpn_A 229 KRDWGFAGDYVEAMWLMLQQDK--ADDYVVAT-GVTTTVRDMCQIAFEHVGLDY 279 (335)
T ss_dssp EEECEEHHHHHHHHHHHHHSSS--CCCEEECC-SCEEEHHHHHHHHHHTTTCCG
T ss_pred eeceEEHHHHHHHHHHHHhcCC--CCEEEEeC-CCCccHHHHHHHHHHHhCCCc
Confidence 9999999999999999998865 47899985 789999999999999999863
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-19 Score=138.26 Aligned_cols=162 Identities=16% Similarity=0.193 Sum_probs=125.4
Q ss_pred ccCcEEEEccCCCC--------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC----CCCCCCCCchhhHHH
Q 038413 14 KEVDVVISTVAYPQ--------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE----DRVRPLPPFEAYLEK 71 (191)
Q Consensus 14 ~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~----~~~~~~~~~~~~~~~ 71 (191)
.++|+|||+++... +.++.+++++|+++| ++|||. |+ |+... .+.....|...|..+
T Consensus 68 ~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~s 146 (321)
T 3vps_A 68 SDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAAS 146 (321)
T ss_dssp TTEEEEEECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred ccCCEEEECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHH
Confidence 38999999998643 346789999999999 999885 33 44321 112223456778899
Q ss_pred HHHHHHHHHh----cCC-CeEEEeccccccccccc------ccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcC
Q 038413 72 KRIVRRAIEA----VEI-PYTFVSANCYGAYFVNV------LLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 72 k~~~e~~l~~----~~~-~~tilrp~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~ 140 (191)
|..+|+++++ .++ +++++||+.++++.... +......++.+.++++++..++++|++|+|++++.++.+
T Consensus 147 K~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~ 226 (321)
T 3vps_A 147 KVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANR 226 (321)
T ss_dssp HHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhc
Confidence 9999998876 588 99999999999864321 111111445678888898999999999999999999998
Q ss_pred cccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 141 PRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 141 ~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
+.. + .|++++ ++.+|+.|+++.+. .+|++.++...|
T Consensus 227 ~~~-g-~~~i~~-~~~~s~~e~~~~i~-~~g~~~~~~~~~ 262 (321)
T 3vps_A 227 PLP-S-VVNFGS-GQSLSVNDVIRILQ-ATSPAAEVARKQ 262 (321)
T ss_dssp CCC-S-EEEESC-SCCEEHHHHHHHHH-TTCTTCEEEEEC
T ss_pred CCC-C-eEEecC-CCcccHHHHHHHHH-HhCCCCccccCC
Confidence 765 5 999995 78999999999999 999988877654
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-19 Score=139.02 Aligned_cols=171 Identities=20% Similarity=0.204 Sum_probs=125.9
Q ss_pred CCCCC-HHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC---
Q 038413 1 GELDE-HEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED--- 57 (191)
Q Consensus 1 gD~~d-~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~--- 57 (191)
+|+.| .+.+.++++++|+|||+++... +.++.+++++|++.+ +|||. |+ ||....
T Consensus 52 ~D~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~~~~ 129 (345)
T 2bll_A 52 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYF 129 (345)
T ss_dssp CCTTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSB
T ss_pred ccccCcHHHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCCCCc
Confidence 58888 4578889999999999988543 345789999999987 67663 43 432211
Q ss_pred -CCCCC-------CCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc--------------cCCCCCCce
Q 038413 58 -RVRPL-------PPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL--------------LRPFEPHDD 111 (191)
Q Consensus 58 -~~~~~-------~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~--------------~~~~~~~~~ 111 (191)
+.... .|...|..+|..+|++++. .+++++++||+.++++..... ......+..
T Consensus 130 ~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (345)
T 2bll_A 130 DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP 209 (345)
T ss_dssp CTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCC
T ss_pred CCcccccccCcccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCC
Confidence 11100 1334678899999998853 589999999999988653210 000013446
Q ss_pred EEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCC-ccCHHHHHHHHHHHhCCce
Q 038413 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTN-IISQLELISLWEQKTGRSF 174 (191)
Q Consensus 112 ~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~-~~t~~e~~~~~~~~~g~~~ 174 (191)
+.+++++++.++++|++|+|++++.++.++. ..++.|++++ ++ .+|+.|+++.+.+.+|.+.
T Consensus 210 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~-~~~~~s~~e~~~~i~~~~g~~~ 274 (345)
T 2bll_A 210 IKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGN-PENEASIEELGEMLLASFEKHP 274 (345)
T ss_dssp EEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC-TTSEEEHHHHHHHHHHHHHTCT
T ss_pred cEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCC-CCCCCCHHHHHHHHHHHhCCCc
Confidence 6778888888999999999999999998864 4578999985 55 8999999999999998753
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-18 Score=133.93 Aligned_cols=169 Identities=12% Similarity=0.080 Sum_probs=126.6
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC--------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ--------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED--- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~--- 57 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.| ++|||. |+ |+....
T Consensus 46 ~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~ 124 (317)
T 3ajr_A 46 LDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPKNK 124 (317)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSCSSS
T ss_pred ecCCCHHHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCCCCC
Confidence 68999999999998 8999999998642 346789999999999 999884 33 443211
Q ss_pred --CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccc-cc------c---cCCCCCCceEEEecCCcce
Q 038413 58 --RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFV-NV------L---LRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 58 --~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~-~~------~---~~~~~~~~~~~~~~~g~~~ 121 (191)
+.....|..+|..+|..+|.+++. .+++++++||+.++++.. +. . .......+.+..+++++..
T Consensus 125 ~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (317)
T 3ajr_A 125 VPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRA 204 (317)
T ss_dssp BCSSSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCC
T ss_pred ccccccCCCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccce
Confidence 111223567788999999988754 589999999888777421 11 0 0001134556677777888
Q ss_pred eeecchhhHHHHHHHHhcCccc---CCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 122 AVFNYEEDIAKCTIKVINDPRT---CNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~---~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
++++|++|+|++++.++.++.. .++.|+++ ++.+|+.|+++.+.+.+|.
T Consensus 205 ~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~--~~~~s~~e~~~~i~~~~~~ 256 (317)
T 3ajr_A 205 LPMMYMPDALKALVDLYEADRDKLVLRNGYNVT--AYTFTPSELYSKIKERIPE 256 (317)
T ss_dssp EEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECC--SEEECHHHHHHHHHTTCCS
T ss_pred eeeeEHHHHHHHHHHHHhCCccccccCceEecC--CccccHHHHHHHHHHHCCc
Confidence 9999999999999999987642 24889997 4689999999999999983
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.1e-19 Score=137.82 Aligned_cols=171 Identities=14% Similarity=0.192 Sum_probs=131.0
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHc--CCcc-------EEEc-CC--
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVA--GNIK-------RFLP-SE-- 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~--g~vk-------r~v~-s~-- 51 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++. + ++ |||. |+
T Consensus 57 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~ 135 (361)
T 1kew_A 57 ADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDE 135 (361)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGG
T ss_pred CCCCCHHHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHH
Confidence 69999999999998 8999999998643 35679999999998 8 88 8874 33
Q ss_pred -cccCC--------------CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc------ccCCC
Q 038413 52 -FGCEE--------------DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV------LLRPF 106 (191)
Q Consensus 52 -~g~~~--------------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~------~~~~~ 106 (191)
||... ++.....|...|..+|..+|.+++. .+++++++||+.++++.... +....
T Consensus 136 v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~ 215 (361)
T 1kew_A 136 VYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNA 215 (361)
T ss_dssp GGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHH
T ss_pred HhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHH
Confidence 44321 1111224566788999999998875 48999999999988864311 11001
Q ss_pred CCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 107 EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
..+..+.+++++...+++++++|+|++++.++.++. .++.|++++ ++.+|+.|+++.+.+.+|.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~v~~-~~~~s~~e~~~~i~~~~g~~~ 281 (361)
T 1kew_A 216 LEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK-AGETYNIGG-HNEKKNLDVVFTICDLLDEIV 281 (361)
T ss_dssp HHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TTCEEEECC-CCEEEHHHHHHHHHHHHHHHS
T ss_pred HcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCCC-CCCEEEecC-CCeeeHHHHHHHHHHHhCCcC
Confidence 134456777888888999999999999999997653 578999995 788999999999999998653
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.5e-18 Score=130.62 Aligned_cols=177 Identities=15% Similarity=0.220 Sum_probs=126.1
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.+ ++|||. |+ ||...
T Consensus 57 ~Dl~~~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~ 135 (338)
T 1udb_A 57 GDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDNPKIP 135 (338)
T ss_dssp CCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSS
T ss_pred ccCCCHHHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCCCCCC
Confidence 68999999999997 4899999998642 356789999999999 999884 33 43221
Q ss_pred -CCCCCCCC-chhhHHHHHHHHHHHHh----c-CCCeEEEeccccccccccc------------cc----CCCC-CCceE
Q 038413 57 -DRVRPLPP-FEAYLEKKRIVRRAIEA----V-EIPYTFVSANCYGAYFVNV------------LL----RPFE-PHDDV 112 (191)
Q Consensus 57 -~~~~~~~~-~~~~~~~k~~~e~~l~~----~-~~~~tilrp~~~~~~~~~~------------~~----~~~~-~~~~~ 112 (191)
.+.....| ..+|..+|..+|++++. . +++++++||+..++..... +. .... ....+
T Consensus 136 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (338)
T 1udb_A 136 YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSL 215 (338)
T ss_dssp BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCE
T ss_pred cCcccCCCCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCc
Confidence 11111123 56788999999998764 3 7999999987666532100 00 0000 22345
Q ss_pred EEec------CCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEc
Q 038413 113 VVYG------NGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 113 ~~~~------~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~ 179 (191)
.+++ +|++.+++||++|+|++++.+++++. ..++.|++++ ++.+|+.|+++.+.+.+|+++++...
T Consensus 216 ~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~ 289 (338)
T 1udb_A 216 AIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGA-GVGNSVLDVVNAFSKACGKPVNYHFA 289 (338)
T ss_dssp EEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESC-SCCEEHHHHHHHHHHHHTSCCCEEEE
T ss_pred EEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecC-CCceeHHHHHHHHHHHhCCCCcceeC
Confidence 5554 46678999999999999999987642 2247899985 78999999999999999987766544
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.2e-19 Score=136.32 Aligned_cols=165 Identities=15% Similarity=0.205 Sum_probs=124.4
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC---cc----cCCCC
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE---FG----CEEDR 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~---~g----~~~~~ 58 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.| ++|||. |+ |+ .....
T Consensus 73 ~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~~ 151 (333)
T 2q1w_A 73 GSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPVR 151 (333)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSBC
T ss_pred EeCCCHHHHHHHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCCC
Confidence 699999999999998 999999998643 356789999999999 999884 33 43 11100
Q ss_pred CCCC-CCc-hhhHHHHHHHHHHHHh-cCCCeEEEeccccccccc-----ccccCCCCCCceEEEecCCcceeeecchhhH
Q 038413 59 VRPL-PPF-EAYLEKKRIVRRAIEA-VEIPYTFVSANCYGAYFV-----NVLLRPFEPHDDVVVYGNGEAKAVFNYEEDI 130 (191)
Q Consensus 59 ~~~~-~~~-~~~~~~k~~~e~~l~~-~~~~~tilrp~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dv 130 (191)
.... .|. ..|..+|..+|.+++. .. +++++||+.++++.. +.+......+. .+++ ++..+++++++|+
T Consensus 152 ~~E~~~p~~~~Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dv 227 (333)
T 2q1w_A 152 LDHPRNPANSSYAISKSANEDYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDL 227 (333)
T ss_dssp TTSCCCCTTCHHHHHHHHHHHHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHH
T ss_pred cCCCCCCCCCchHHHHHHHHHHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHH
Confidence 0000 345 6788999999999987 66 999999998887541 11111001222 3444 5667899999999
Q ss_pred HHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 131 AKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 131 a~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
|++++.++.++. ++.|++++ ++.+|+.|+++.+.+.+|.+
T Consensus 228 a~ai~~~~~~~~--g~~~~v~~-~~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 228 ARATVRAVDGVG--HGAYHFSS-GTDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp HHHHHHHHTTCC--CEEEECSC-SCCEEHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHhcCC--CCEEEeCC-CCCccHHHHHHHHHHHhCCC
Confidence 999999998875 88999985 78999999999999999987
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=133.61 Aligned_cols=170 Identities=8% Similarity=0.042 Sum_probs=117.5
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccC---C
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCE---E 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~---~ 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.| + |||. |+ |+.. .
T Consensus 44 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~~~~~ 121 (315)
T 2ydy_A 44 VNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGTNPPY 121 (315)
T ss_dssp --------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSSSCSB
T ss_pred ecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCCCCCC
Confidence 588999999999986 899999998532 456799999999999 7 7663 43 3321 1
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEecccccccccc---cccC----CCC-CCceEEEecCCcceeeecchh
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVN---VLLR----PFE-PHDDVVVYGNGEAKAVFNYEE 128 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~---~~~~----~~~-~~~~~~~~~~g~~~~~~i~~~ 128 (191)
.+.....|...|..+|..+|++++..+++++++||+.++++... .+.. ... .+..+.+. ++..+++++++
T Consensus 122 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~ 199 (315)
T 2ydy_A 122 REEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVK 199 (315)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHH
Confidence 11122245667889999999999988999999999998875432 1111 001 23334443 35678999999
Q ss_pred hHHHHHHHHhcCc---ccCCceeEeecCCCccCHHHHHHHHHHHhCCceE
Q 038413 129 DIAKCTIKVINDP---RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 129 Dva~~~~~~l~~~---~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~ 175 (191)
|+|++++.++.++ ...++.+++++ ++.+|+.|+++.+.+.+|.+.+
T Consensus 200 Dva~a~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~ 248 (315)
T 2ydy_A 200 DVATVCRQLAEKRMLDPSIKGTFHWSG-NEQMTKYEMACAIADAFNLPSS 248 (315)
T ss_dssp HHHHHHHHHHHHHHTCTTCCEEEECCC-SCCBCHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHhhccccCCCCeEEEcC-CCcccHHHHHHHHHHHhCCChh
Confidence 9999999998764 34578999995 7899999999999999998754
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-18 Score=134.56 Aligned_cols=167 Identities=12% Similarity=0.104 Sum_probs=126.0
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCCC--CC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEEDR--VR 60 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~~--~~ 60 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.+ ++|||. |+ |+..... ..
T Consensus 72 ~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~ 150 (330)
T 2pzm_A 72 GSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPI 150 (330)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCT
T ss_pred eeCCCHHHHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCc
Confidence 69999999999998 9999999998642 356789999999999 999884 33 3322110 00
Q ss_pred CC--CCchhhHHHHHHHHHHHHhcCCCeEEEecccccccccc-cccC---CCCCCceEEEecCCcceeeecchhhHHH-H
Q 038413 61 PL--PPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVN-VLLR---PFEPHDDVVVYGNGEAKAVFNYEEDIAK-C 133 (191)
Q Consensus 61 ~~--~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~-~~~~---~~~~~~~~~~~~~g~~~~~~i~~~Dva~-~ 133 (191)
.. .|...|..+|..+|.+++..+++++++||+..++++.. .+.. .....+. .+++++. .+++++++|+|+ +
T Consensus 151 ~E~~~~~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dva~~a 228 (330)
T 2pzm_A 151 DSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDFLAIA 228 (330)
T ss_dssp TCCCCCCSHHHHHHHHHHHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHHHHHH
T ss_pred CCCCCCCChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHHHHHH
Confidence 00 25567889999999999988999999999888875431 1100 0001112 3445566 789999999999 9
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
++.++.++. ++.|++++ ++.+|+.|+++.+.+.+|++
T Consensus 229 ~~~~~~~~~--g~~~~v~~-~~~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 229 DLSLQEGRP--TGVFNVST-GEGHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp HHHTSTTCC--CEEEEESC-SCCEEHHHHHHHHHHHHTCC
T ss_pred HHHHhhcCC--CCEEEeCC-CCCCCHHHHHHHHHHHhCCC
Confidence 999998865 88999985 78999999999999999987
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=133.38 Aligned_cols=164 Identities=20% Similarity=0.249 Sum_probs=120.9
Q ss_pred hhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cCC---cccCC----CCC-----CCCC
Q 038413 12 ILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PSE---FGCEE----DRV-----RPLP 63 (191)
Q Consensus 12 a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s~---~g~~~----~~~-----~~~~ 63 (191)
++.++|+|||+++... +.++.+++++|++.| + ||| .|+ ||... .+. ....
T Consensus 88 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~ 165 (343)
T 2b69_A 88 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIG 165 (343)
T ss_dssp CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSS
T ss_pred hhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCCCCCcccccccCCCCC
Confidence 4678999999998643 345789999999999 7 655 343 43221 111 1123
Q ss_pred CchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc--------ccCCCCCCceEEEecCCcceeeecchhhHH
Q 038413 64 PFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV--------LLRPFEPHDDVVVYGNGEAKAVFNYEEDIA 131 (191)
Q Consensus 64 ~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva 131 (191)
|...|..+|..+|+++.. .+++++++||+.++++.... +......++.+.++++++..+++++++|+|
T Consensus 166 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva 245 (343)
T 2b69_A 166 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 245 (343)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHH
Confidence 445678899999988754 58999999999988764211 111011345667788888899999999999
Q ss_pred HHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 132 KCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
++++.++..+. ++.+++++ ++.+|+.|+++.+.+.+|.+.++..+|
T Consensus 246 ~a~~~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~p 291 (343)
T 2b69_A 246 NGLVALMNSNV--SSPVNLGN-PEEHTILEFAQLIKNLVGSGSEIQFLS 291 (343)
T ss_dssp HHHHHHHTSSC--CSCEEESC-CCEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred HHHHHHHhcCC--CCeEEecC-CCCCcHHHHHHHHHHHhCCCCCceeCC
Confidence 99999998753 67899985 789999999999999999887766554
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-18 Score=138.94 Aligned_cols=178 Identities=12% Similarity=0.105 Sum_probs=129.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CCcccCC-----------
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEE----------- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~----------- 56 (191)
||+.|.+.+. ++.++|+|||+++... +.++.+++++|++ + +++||. |+.+...
T Consensus 137 ~Dl~d~~~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~~~~~~~~ 213 (427)
T 4f6c_A 137 GDFECMDDVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTF 213 (427)
T ss_dssp ECC---CCCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECSSCSCCEE
T ss_pred CCCCCcccCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccCCCCCccc
Confidence 5888877777 7789999999998642 4567999999999 7 889874 4322200
Q ss_pred CCCCC---CCCchhhHHHHHHHHHHHHh---cCCCeEEEecccccccccccccCC-------------CCCCceEEEecC
Q 038413 57 DRVRP---LPPFEAYLEKKRIVRRAIEA---VEIPYTFVSANCYGAYFVNVLLRP-------------FEPHDDVVVYGN 117 (191)
Q Consensus 57 ~~~~~---~~~~~~~~~~k~~~e~~l~~---~~~~~tilrp~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 117 (191)
.+... ..|...|..+|..+|+++++ .|++++++||+.++++........ ....+.+.. +.
T Consensus 214 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 292 (427)
T 4f6c_A 214 SEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SM 292 (427)
T ss_dssp CTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HH
T ss_pred cccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-cc
Confidence 01111 12566788999999999886 799999999999988643321000 002223332 33
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
++..+++++++|+|++++.++.++. .+++|++++ ++.+|+.|+++.+++ +| +..++.++|.+.+.
T Consensus 293 ~~~~~~~v~v~DvA~ai~~~~~~~~-~g~~~~l~~-~~~~s~~el~~~i~~-~g----~~~~~~~~~~~~l~ 357 (427)
T 4f6c_A 293 AEMPVDFSFVDTTARQIVALAQVNT-PQIIYHVLS-PNKMPVKSLLECVKR-KE----IELVSDESFNEILQ 357 (427)
T ss_dssp HTCEECCEEHHHHHHHHHHHTTSCC-CCSEEEESC-SCCEEHHHHHHHHHS-SC----CEEECHHHHHHHHH
T ss_pred ccceEEEeeHHHHHHHHHHHHcCCC-CCCEEEecC-CCCCcHHHHHHHHHH-cC----CcccCHHHHHHHHH
Confidence 5778999999999999999999877 789999996 789999999999999 66 55678888877664
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4e-18 Score=127.01 Aligned_cols=166 Identities=18% Similarity=0.211 Sum_probs=119.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------------------cccHHHHHHHHHHcCCccEEEc-CC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------------------FLDQLKIVHAIKVAGNIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------------------~~~~~~li~aa~~~g~vkr~v~-s~ 51 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++.+ ++|||. |+
T Consensus 55 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS 133 (253)
T 1xq6_A 55 GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGS 133 (253)
T ss_dssp CCTTSHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEE
T ss_pred ecCCCHHHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcC
Confidence 689999999999999999999997531 235789999999999 999885 44
Q ss_pred cccCCCCCCCCCC--chhhHHHHHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhh
Q 038413 52 FGCEEDRVRPLPP--FEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEED 129 (191)
Q Consensus 52 ~g~~~~~~~~~~~--~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~D 129 (191)
.+.... .....+ ...|..+|..+|.++++.+++++++||+.++++.............. +++ ...++++++|
T Consensus 134 ~~~~~~-~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~D 207 (253)
T 1xq6_A 134 MGGTNP-DHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDE--LLQ---TDTKTVPRAD 207 (253)
T ss_dssp TTTTCT-TCGGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSSCEEEESTTG--GGG---SSCCEEEHHH
T ss_pred ccCCCC-CCccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchhhhhccCCcC--CcC---CCCcEEcHHH
Confidence 332111 110011 12355689999999999999999999999887642110000000000 111 1356899999
Q ss_pred HHHHHHHHhcCcccCCceeEeecC--CCccCHHHHHHHHHHHhCCc
Q 038413 130 IAKCTIKVINDPRTCNRIVIYRPQ--TNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 130 va~~~~~~l~~~~~~~~~~~i~~~--~~~~t~~e~~~~~~~~~g~~ 173 (191)
+|++++.++.++...++.++++++ ++.+|+.|+++.+++.+|++
T Consensus 208 va~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 208 VAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp HHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred HHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 999999999987666889999862 13599999999999999874
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-18 Score=134.87 Aligned_cols=175 Identities=11% Similarity=0.070 Sum_probs=123.6
Q ss_pred CCCCCHHHHHHhhcc---CcEEEEccCCCC----------cccHHHHHHHHHHc--CCccEEE--------cCC---ccc
Q 038413 1 GELDEHEKIVSILKE---VDVVISTVAYPQ----------FLDQLKIVHAIKVA--GNIKRFL--------PSE---FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~g---~d~V~~~~~~~~----------~~~~~~li~aa~~~--g~vkr~v--------~s~---~g~ 54 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++. + ++||+ .|+ ||.
T Consensus 55 ~Dl~d~~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~ 133 (364)
T 2v6g_A 55 CDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGK 133 (364)
T ss_dssp CCTTSHHHHHHHHTTCTTCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTT
T ss_pred eecCCHHHHHHHHhcCCCCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccc
Confidence 689999999999998 999999998642 46689999999998 7 99986 344 443
Q ss_pred CC------CCCCCCCC-chhhHHHHHHHHHHHHhcC-CCeEEEecccccccccccccC-------C-CC---CCceEEEe
Q 038413 55 EE------DRVRPLPP-FEAYLEKKRIVRRAIEAVE-IPYTFVSANCYGAYFVNVLLR-------P-FE---PHDDVVVY 115 (191)
Q Consensus 55 ~~------~~~~~~~~-~~~~~~~k~~~e~~l~~~~-~~~tilrp~~~~~~~~~~~~~-------~-~~---~~~~~~~~ 115 (191)
.. .+.....| ...|+.....++++.++.+ ++++++||+.++++....... . .+ .+..+.++
T Consensus 134 ~~~~~~~~~E~~~~~~~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 213 (364)
T 2v6g_A 134 IESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFT 213 (364)
T ss_dssp SCCCCSSBCTTSCCCSSCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCC
T ss_pred cccCCCCCCccccCCccchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecC
Confidence 21 11111122 3355444444444444456 999999999999864322110 0 01 23344556
Q ss_pred cCCc---ceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEE
Q 038413 116 GNGE---AKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177 (191)
Q Consensus 116 ~~g~---~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~ 177 (191)
++++ ...++++++|+|++++.+++++...++.|++++ ++.+|+.|+++.+++.+|.+....
T Consensus 214 g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~ 277 (364)
T 2v6g_A 214 GCKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSN-GDVFKWKHFWKVLAEQFGVECGEY 277 (364)
T ss_dssp SCHHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECC-SCCBCHHHHHHHHHHHHTCCBCCC
T ss_pred CCcccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecC-CCcCCHHHHHHHHHHHhCCCCCCC
Confidence 6663 336778889999999999998765678999995 688999999999999999886654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.76 E-value=4e-18 Score=139.54 Aligned_cols=179 Identities=12% Similarity=0.097 Sum_probs=130.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CCccc--CC---------
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SEFGC--EE--------- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~~g~--~~--------- 56 (191)
||+.|.+.+. ++.++|+|||+++... +.++.+++++|++ + +++||. |+.+. ..
T Consensus 218 ~Dl~d~~~l~-~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~ 294 (508)
T 4f6l_B 218 GDFECMDDVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTF 294 (508)
T ss_dssp EBTTBCSSCC-CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEE
T ss_pred cCCcccccCC-CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCccc
Confidence 4777877776 7789999999998642 4678999999998 6 788774 43322 10
Q ss_pred CCCCC---CCCchhhHHHHHHHHHHHHh---cCCCeEEEecccccccccccccC-------------CCCCCceEEEecC
Q 038413 57 DRVRP---LPPFEAYLEKKRIVRRAIEA---VEIPYTFVSANCYGAYFVNVLLR-------------PFEPHDDVVVYGN 117 (191)
Q Consensus 57 ~~~~~---~~~~~~~~~~k~~~e~~l~~---~~~~~tilrp~~~~~~~~~~~~~-------------~~~~~~~~~~~~~ 117 (191)
.+... ..|...|..+|..+|+++.+ .|++++++||+.+++........ .....+.+.. +.
T Consensus 295 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~ 373 (508)
T 4f6l_B 295 SEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SM 373 (508)
T ss_dssp CTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TG
T ss_pred ccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-Cc
Confidence 01110 12456788999999999876 79999999999998864322100 0012233322 34
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
++..+++++++|+|++++.++.++. .+++|++++ ++.+|+.|+++.+++.. +..++.++|...+..
T Consensus 374 g~~~~~~v~v~DvA~ai~~~~~~~~-~~~~~nl~~-~~~~s~~el~~~i~~~~-----~~~~~~~~w~~~l~~ 439 (508)
T 4f6l_B 374 AEMPVDFSFVDTTARQIVALAQVNT-PQIIYHVLS-PNKMPVKSLLECVKRKE-----IELVSDESFNEILQK 439 (508)
T ss_dssp GGSEEECEEHHHHHHHHHHHTTBCC-SCSEEEESC-SCEEEHHHHHHHHHSSC-----CEEECHHHHHHHHHT
T ss_pred cCceEEEEcHHHHHHHHHHHHhCCC-CCCEEEeCC-CCCCCHHHHHHHHHHcC-----CcccCHHHHHHHHHh
Confidence 6788999999999999999999876 789999996 78999999999999865 556788888876653
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=131.90 Aligned_cols=172 Identities=15% Similarity=0.150 Sum_probs=127.4
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCc---cEEEc-CC---cccCC
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNI---KRFLP-SE---FGCEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~v---kr~v~-s~---~g~~~ 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+ + +|||. |+ |+...
T Consensus 86 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~ 164 (375)
T 1t2a_A 86 GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQ 164 (375)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCS
T ss_pred ccCCCHHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCC
Confidence 589999999999986 599999998643 346789999999999 8 78874 33 44221
Q ss_pred ----CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc-cc--------cCCCCCC-ceEEEecCC
Q 038413 57 ----DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN-VL--------LRPFEPH-DDVVVYGNG 118 (191)
Q Consensus 57 ----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~-~~--------~~~~~~~-~~~~~~~~g 118 (191)
.+.....|...|..+|..+|.+++. .+++++++|+...+++... .+ ......+ .....++++
T Consensus 165 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 244 (375)
T 1t2a_A 165 EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNL 244 (375)
T ss_dssp SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCT
T ss_pred CCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCC
Confidence 1112224566788999999988865 4899999998776654211 11 0000012 233456788
Q ss_pred cceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEE
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~ 176 (191)
+..++++|++|+|++++.+++++. ++.|++++ ++.+|+.|+++.+.+.+|++.++
T Consensus 245 ~~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~ 299 (375)
T 1t2a_A 245 DAKRDWGHAKDYVEAMWLMLQNDE--PEDFVIAT-GEVHSVREFVEKSFLHIGKTIVW 299 (375)
T ss_dssp TCEECCEEHHHHHHHHHHHHHSSS--CCCEEECC-SCCEEHHHHHHHHHHHTTCCEEE
T ss_pred CceeeeEEHHHHHHHHHHHHhcCC--CceEEEeC-CCcccHHHHHHHHHHHhCCCccc
Confidence 889999999999999999998764 47899985 78999999999999999988654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=141.68 Aligned_cols=176 Identities=14% Similarity=0.168 Sum_probs=127.5
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.+ ++|||. |+ ||...
T Consensus 68 ~Dl~d~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~ 146 (699)
T 1z45_A 68 VDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFP 146 (699)
T ss_dssp CCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGST
T ss_pred cCCCCHHHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCcccc
Confidence 68999999999998 8999999998643 356789999999999 999884 33 33211
Q ss_pred -----CCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEeccccccccccc------------c----cCCCC-C
Q 038413 57 -----DRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNV------------L----LRPFE-P 108 (191)
Q Consensus 57 -----~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~------------~----~~~~~-~ 108 (191)
.+.....|...|..+|..+|+++++ .+++++++||+.+++..... + ..... .
T Consensus 147 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 226 (699)
T 1z45_A 147 NMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGR 226 (699)
T ss_dssp TCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTS
T ss_pred ccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcC
Confidence 1111223556788999999998865 58999999998877643111 0 00000 1
Q ss_pred CceEEEec------CCcceeeecchhhHHHHHHHHhcCc------ccCCceeEeecCCCccCHHHHHHHHHHHhCCceEE
Q 038413 109 HDDVVVYG------NGEAKAVFNYEEDIAKCTIKVINDP------RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176 (191)
Q Consensus 109 ~~~~~~~~------~g~~~~~~i~~~Dva~~~~~~l~~~------~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~ 176 (191)
...+.+++ +++..+++||++|+|++++.+++.+ ...++.|++++ ++.+|+.|+++.+++.+|+++++
T Consensus 227 ~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~-~~~~s~~el~~~i~~~~g~~~~~ 305 (699)
T 1z45_A 227 REKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGS-GKGSTVFEVYHAFCKASGIDLPY 305 (699)
T ss_dssp SSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESC-SCCEEHHHHHHHHHHHHTCCCCC
T ss_pred CCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECC-CCCCcHHHHHHHHHHHhCCCCCc
Confidence 23444555 5778899999999999999988742 22357899985 78999999999999999987665
Q ss_pred EE
Q 038413 177 VH 178 (191)
Q Consensus 177 ~~ 178 (191)
..
T Consensus 306 ~~ 307 (699)
T 1z45_A 306 KV 307 (699)
T ss_dssp --
T ss_pred ee
Confidence 43
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.2e-18 Score=125.24 Aligned_cols=153 Identities=14% Similarity=0.109 Sum_probs=92.8
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC------cccHHHHHHHHHHcCCccEEEc-CCcccC---CC-----CCCCCCCc
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ------FLDQLKIVHAIKVAGNIKRFLP-SEFGCE---ED-----RVRPLPPF 65 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~------~~~~~~li~aa~~~g~vkr~v~-s~~g~~---~~-----~~~~~~~~ 65 (191)
+|+.|.++ +++.++|+|||+++... ..++.+++++|+++| ++|+|. |+.+.. .. ......|.
T Consensus 49 ~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~ 125 (221)
T 3ew7_A 49 KDIFDLTL--SDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLREA 125 (221)
T ss_dssp CCGGGCCH--HHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-------------------C
T ss_pred ccccChhh--hhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCCCCCH
Confidence 58888877 78999999999998753 467899999999998 888774 543221 10 01111233
Q ss_pred hhhHHHHHHHHHH--HH--hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCc
Q 038413 66 EAYLEKKRIVRRA--IE--AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 66 ~~~~~~k~~~e~~--l~--~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
..|..+|...|.+ +. +++++|+++||+.++++. +...........+.+.+++ .++++++|+|++++.+++++
T Consensus 126 ~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~-~~~~~~~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~ 201 (221)
T 3ew7_A 126 PYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG-ERTGDYQIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERP 201 (221)
T ss_dssp CCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC-------------------------CCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCC-CccCceEeccccceecCCC---CceEeHHHHHHHHHHHHhCc
Confidence 3455566666554 66 579999999999999862 1111111122333344333 36899999999999999999
Q ss_pred ccCCceeEeecCCCccCHHH
Q 038413 142 RTCNRIVIYRPQTNIISQLE 161 (191)
Q Consensus 142 ~~~~~~~~i~~~~~~~t~~e 161 (191)
+..++.|++++ +...+.+|
T Consensus 202 ~~~g~~~~~~~-~~~~~~~~ 220 (221)
T 3ew7_A 202 NHLNEHFTVAG-KLEHHHHH 220 (221)
T ss_dssp SCTTSEEECCC---------
T ss_pred cccCCEEEECC-CCcccccc
Confidence 88899999995 56666554
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=4.5e-17 Score=128.02 Aligned_cols=172 Identities=15% Similarity=0.171 Sum_probs=127.1
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCc---cEEEc-CC---cccCC
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNI---KRFLP-SE---FGCEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~v---kr~v~-s~---~g~~~ 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+ + +|||. |+ ||...
T Consensus 62 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~ 140 (372)
T 1db3_A 62 GDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQ 140 (372)
T ss_dssp CCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCC
T ss_pred CCCCCHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCC
Confidence 589999999999986 699999998532 346789999999999 8 78874 33 44321
Q ss_pred ----CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc---------cccCCCCCCc-eEEEecCC
Q 038413 57 ----DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN---------VLLRPFEPHD-DVVVYGNG 118 (191)
Q Consensus 57 ----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~---------~~~~~~~~~~-~~~~~~~g 118 (191)
.+.....|...|..+|..+|.+++. .+++++++|+...+++... .+......+. ....++++
T Consensus 141 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 220 (372)
T 1db3_A 141 EIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNM 220 (372)
T ss_dssp SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCT
T ss_pred CCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCC
Confidence 1122224566788999999988864 4899999998766553211 0100001222 34556788
Q ss_pred cceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEE
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~ 176 (191)
++.++++|++|+|++++.+++++. ++.|++++ ++.+|+.|+++.+.+.+|.+.++
T Consensus 221 ~~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~ 275 (372)
T 1db3_A 221 DSLRDWGHAKDYVKMQWMMLQQEQ--PEDFVIAT-GVQYSVRQFVEMAAAQLGIKLRF 275 (372)
T ss_dssp TCEECCEEHHHHHHHHHHTTSSSS--CCCEEECC-CCCEEHHHHHHHHHHTTTEEEEE
T ss_pred CceeeeeEHHHHHHHHHHHHhcCC--CceEEEcC-CCceeHHHHHHHHHHHhCCCccc
Confidence 889999999999999999998764 47899985 78999999999999999987654
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=6.2e-17 Score=125.82 Aligned_cols=172 Identities=16% Similarity=0.171 Sum_probs=126.1
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCc-cEEEc-CC---cccCC--
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNI-KRFLP-SE---FGCEE-- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~v-kr~v~-s~---~g~~~-- 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+ + +|||. |+ ||...
T Consensus 59 ~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~ 137 (345)
T 2z1m_A 59 MDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQEI 137 (345)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSSS
T ss_pred CCCCCHHHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCC
Confidence 589999999999986 599999998642 356789999999998 8 78874 33 44321
Q ss_pred --CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc-c--------cCCCCCC-ceEEEecCCcc
Q 038413 57 --DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV-L--------LRPFEPH-DDVVVYGNGEA 120 (191)
Q Consensus 57 --~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~-~--------~~~~~~~-~~~~~~~~g~~ 120 (191)
.+.....|..+|..+|..+|.+++. .+++++++|+...++++... . ......+ .....+++++.
T Consensus 138 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (345)
T 2z1m_A 138 PQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNA 217 (345)
T ss_dssp SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTC
T ss_pred CCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCc
Confidence 1112224566788999999988765 38999999876655543211 0 0000012 22335677788
Q ss_pred eeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEE
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~ 176 (191)
.+++++++|+|++++.++.++. ++.|++++ ++.+|+.|+++.+.+.+|++.++
T Consensus 218 ~~~~~~v~Dva~a~~~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~ 270 (345)
T 2z1m_A 218 KRDWGYAPEYVEAMWLMMQQPE--PDDYVIAT-GETHTVREFVEKAAKIAGFDIEW 270 (345)
T ss_dssp EECCEEHHHHHHHHHHHHTSSS--CCCEEECC-SCCEEHHHHHHHHHHHTTCCEEE
T ss_pred eeeeEEHHHHHHHHHHHHhCCC--CceEEEeC-CCCccHHHHHHHHHHHhCCCccc
Confidence 8999999999999999998764 47899985 78999999999999999998654
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-17 Score=130.17 Aligned_cols=159 Identities=11% Similarity=0.149 Sum_probs=121.5
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPP 64 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~ 64 (191)
||+.|.+++.++++++|+|||+++... +.++.+++++|++.| ++|||. |+... ..|
T Consensus 77 ~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~-------~~p 148 (344)
T 2gn4_A 77 GDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKA-------ANP 148 (344)
T ss_dssp CCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGG-------SSC
T ss_pred CCCCCHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCcc-------CCC
Confidence 699999999999999999999998653 355789999999999 999885 44221 134
Q ss_pred chhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccc---ccccCCCCCCc-eEEEecCCcceeeecchhhHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFV---NVLLRPFEPHD-DVVVYGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~---~~~~~~~~~~~-~~~~~~~g~~~~~~i~~~Dva~~ 133 (191)
..+|..+|..+|+++++ .+++++++|||.+++... +.+......++ .+.+. +++..+++++++|+|++
T Consensus 149 ~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~ 227 (344)
T 2gn4_A 149 INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSF 227 (344)
T ss_dssp CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHH
Confidence 56788999999999875 468999999999887531 21111001223 45554 66777899999999999
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
++.++.++. .++.|++. ++.+|+.|+++.+.+.++
T Consensus 228 v~~~l~~~~-~g~~~~~~--~~~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 228 VLKSLKRMH-GGEIFVPK--IPSMKMTDLAKALAPNTP 262 (344)
T ss_dssp HHHHHHHCC-SSCEEEEC--CCEEEHHHHHHHHCTTCC
T ss_pred HHHHHhhcc-CCCEEecC--CCcEEHHHHHHHHHHhCC
Confidence 999998764 46778776 457999999999987653
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=135.97 Aligned_cols=185 Identities=11% Similarity=0.022 Sum_probs=128.5
Q ss_pred CCCC------CHHHHHHhhccCcEEEEccCCCC-----------cccHHHHHHHHHHcCCccEEEc-CC---cccCCCC-
Q 038413 1 GELD------EHEKIVSILKEVDVVISTVAYPQ-----------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEEDR- 58 (191)
Q Consensus 1 gD~~------d~~~l~~a~~g~d~V~~~~~~~~-----------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~~- 58 (191)
||+. |.+.+.++++++|+|||+++... +.++.+++++|++.+ +++||. |+ |+.....
T Consensus 147 ~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~~~~~ 225 (478)
T 4dqv_A 147 GDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEPSA 225 (478)
T ss_dssp CCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTSCTTT
T ss_pred eECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCccCCCC
Confidence 5776 67789999999999999998742 467899999999999 999884 43 3321111
Q ss_pred ---CCCCCCc-----------hhhHHHHHHHHHHHHh----cCCCeEEEeccccccccc-ccccC-------C---CCCC
Q 038413 59 ---VRPLPPF-----------EAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFV-NVLLR-------P---FEPH 109 (191)
Q Consensus 59 ---~~~~~~~-----------~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~-~~~~~-------~---~~~~ 109 (191)
.....|. ..|..+|..+|.++++ .|++++++||+.+++... ..... . ....
T Consensus 226 ~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~ 305 (478)
T 4dqv_A 226 FTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMAT 305 (478)
T ss_dssp CCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHH
T ss_pred cCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHc
Confidence 0000111 2388999999999876 499999999999987421 10000 0 0011
Q ss_pred ceEEE--e---cC---CcceeeecchhhHHHHHHHHhcC----cccCCceeEeecCCCc--cCHHHHHHHHHHHhCCceE
Q 038413 110 DDVVV--Y---GN---GEAKAVFNYEEDIAKCTIKVIND----PRTCNRIVIYRPQTNI--ISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 110 ~~~~~--~---~~---g~~~~~~i~~~Dva~~~~~~l~~----~~~~~~~~~i~~~~~~--~t~~e~~~~~~~~~g~~~~ 175 (191)
+.++. + ++ ++..+++++++|+|++++.++.+ +...+++|++++ ++. +|+.|+++.+.+. |.+++
T Consensus 306 g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~-~~~~~~s~~el~~~l~~~-g~~~~ 383 (478)
T 4dqv_A 306 GIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMN-PHDDGIGLDEYVDWLIEA-GYPIR 383 (478)
T ss_dssp CEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESC-CCCSSCSHHHHHHHHHHT-TCSCE
T ss_pred CcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecC-CCCCCcCHHHHHHHHHHc-CCCcc
Confidence 22221 1 11 15678999999999999999876 556689999996 666 9999999999996 87765
Q ss_pred EEEcCHHHHHHHhh
Q 038413 176 RVHISEEELVKLSQ 189 (191)
Q Consensus 176 ~~~~~~~~~~~~~~ 189 (191)
.+ ++.++|...+.
T Consensus 384 ~i-~~~~~w~~~l~ 396 (478)
T 4dqv_A 384 RI-DDFAEWLQRFE 396 (478)
T ss_dssp EE-SSHHHHHHHHH
T ss_pred cC-CCHHHHHHHHH
Confidence 42 36777766553
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-16 Score=114.65 Aligned_cols=141 Identities=12% Similarity=0.118 Sum_probs=104.5
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYLEK 71 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~ 71 (191)
+|+.|.+++.++++++|+|||+++... ..+..+++++|++.+ ++|||. |+.+..........+..+|..+
T Consensus 53 ~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~ 131 (206)
T 1hdo_A 53 GDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDD 131 (206)
T ss_dssp SCTTSHHHHHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHH
T ss_pred ecCCCHHHHHHHHcCCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCcccccccchhHHHH
Confidence 689999999999999999999998643 356799999999999 999884 5543322111111145678889
Q ss_pred HHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcce-eeecchhhHHHHHHHHhcCcccCCceeEe
Q 038413 72 KRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK-AVFNYEEDIAKCTIKVINDPRTCNRIVIY 150 (191)
Q Consensus 72 k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~~~Dva~~~~~~l~~~~~~~~~~~i 150 (191)
|..+|+++++.+++|+++||+.+....... ......+ ..+ .++++++|+|++++.++.++...++.+++
T Consensus 132 K~~~e~~~~~~~i~~~~lrp~~~~~~~~~~--------~~~~~~~--~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i 201 (206)
T 1hdo_A 132 HIRMHKVLRESGLKYVAVMPPHIGDQPLTG--------AYTVTLD--GRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYP 201 (206)
T ss_dssp HHHHHHHHHHTCSEEEEECCSEEECCCCCS--------CCEEESS--SCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEE
T ss_pred HHHHHHHHHhCCCCEEEEeCCcccCCCCCc--------ceEeccc--CCCCCCccCHHHHHHHHHHHhcCccccccceee
Confidence 999999999999999999999874321111 0111111 112 58999999999999999998767899999
Q ss_pred ec
Q 038413 151 RP 152 (191)
Q Consensus 151 ~~ 152 (191)
++
T Consensus 202 ~~ 203 (206)
T 1hdo_A 202 SH 203 (206)
T ss_dssp EC
T ss_pred ec
Confidence 85
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-17 Score=140.67 Aligned_cols=170 Identities=20% Similarity=0.227 Sum_probs=125.5
Q ss_pred CCCCCHHH-HHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC---
Q 038413 1 GELDEHEK-IVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED--- 57 (191)
Q Consensus 1 gD~~d~~~-l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~--- 57 (191)
||+.|.++ +.++++++|+|||+++... +.++.+++++|++.| +|||. |+ ||....
T Consensus 367 ~Dl~d~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~~~~ 444 (660)
T 1z7e_A 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYF 444 (660)
T ss_dssp CCTTTCHHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCSSSB
T ss_pred CCCCCcHHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCCccc
Confidence 68888765 7788999999999988643 356789999999987 67764 43 432211
Q ss_pred -CCCC-------CCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc--------------ccCCCCCCce
Q 038413 58 -RVRP-------LPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV--------------LLRPFEPHDD 111 (191)
Q Consensus 58 -~~~~-------~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~--------------~~~~~~~~~~ 111 (191)
+... ..|...|..+|..+|.++.+ .|++++++||+.+++..... +......+..
T Consensus 445 ~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 524 (660)
T 1z7e_A 445 DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP 524 (660)
T ss_dssp CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCC
T ss_pred CCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCC
Confidence 1110 02344688899999998853 58999999999998764321 0000113455
Q ss_pred EEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCC-ccCHHHHHHHHHHHhCCc
Q 038413 112 VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTN-IISQLELISLWEQKTGRS 173 (191)
Q Consensus 112 ~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~-~~t~~e~~~~~~~~~g~~ 173 (191)
+.++++++..+++++++|+|++++.++.++. ..++.|++++ ++ .+|+.|+++.+.+.+|.+
T Consensus 525 ~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~-~~~~~s~~el~~~i~~~~g~~ 588 (660)
T 1z7e_A 525 IKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGN-PENEASIEELGEMLLASFEKH 588 (660)
T ss_dssp EEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC-GGGEEEHHHHHHHHHHHHHHC
T ss_pred cEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECC-CCCCcCHHHHHHHHHHHhcCC
Confidence 6777888888999999999999999998864 3578999985 55 899999999999999854
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-17 Score=129.73 Aligned_cols=169 Identities=11% Similarity=0.036 Sum_probs=118.9
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHH-cCCccEEEc-CC---cccCCC------
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKV-AGNIKRFLP-SE---FGCEED------ 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~-~g~vkr~v~-s~---~g~~~~------ 57 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++ .+ ++|||. |+ |+....
T Consensus 69 ~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~ 147 (342)
T 1y1p_A 69 EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNVEGIY 147 (342)
T ss_dssp SCTTSTTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTCCCCE
T ss_pred cCCcChHHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCCCCcc
Confidence 589999999999999999999998643 4567899999985 67 899884 43 321111
Q ss_pred --CCC----------------CCCCchhhHHHHHHHHHHHHhc------CCCeEEEecccccccccccc---------cC
Q 038413 58 --RVR----------------PLPPFEAYLEKKRIVRRAIEAV------EIPYTFVSANCYGAYFVNVL---------LR 104 (191)
Q Consensus 58 --~~~----------------~~~~~~~~~~~k~~~e~~l~~~------~~~~tilrp~~~~~~~~~~~---------~~ 104 (191)
+.. ...|...|..+|..+|.+++.. +++++++||+.++++..... ..
T Consensus 148 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~ 227 (342)
T 1y1p_A 148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMM 227 (342)
T ss_dssp ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHH
T ss_pred cCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHH
Confidence 000 0113356788999999988642 68899999999887543211 00
Q ss_pred CCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 105 PFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 105 ~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
....+....+++++ ..+++++++|+|++++.++.++...++.+... ++.+|+.|+++++.+.+|.+
T Consensus 228 ~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~--g~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 228 SLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGT--AGTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp HHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEEC--CEEECHHHHHHHHHHHCTTS
T ss_pred HHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCcccCCceEEEe--CCCCCHHHHHHHHHHHCCCc
Confidence 00122333334444 56899999999999999998765445555544 57899999999999999964
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-16 Score=119.46 Aligned_cols=166 Identities=15% Similarity=0.097 Sum_probs=122.2
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCC---
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~--- 56 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+ + |+|. |+ |+...
T Consensus 41 ~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~~~ 118 (273)
T 2ggs_A 41 LDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKGNY 118 (273)
T ss_dssp CCTTSHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSCSB
T ss_pred eccCCHHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCCCc
Confidence 699999999999987 999999998653 346789999999998 7 6663 43 32211
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEeccccccc--ccccccCCCCCCceEEEecCCcceeeecchhhHHHHH
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAY--FVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCT 134 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~ 134 (191)
.+.....|...|..+|..+|.+++. ++++++||+.+++. +...+......+..+.++++ .+++++++|+|+++
T Consensus 119 ~e~~~~~~~~~Y~~sK~~~e~~~~~--~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i 193 (273)
T 2ggs_A 119 KEEDIPNPINYYGLSKLLGETFALQ--DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAI 193 (273)
T ss_dssp CTTSCCCCSSHHHHHHHHHHHHHCC--TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhC--CCeEEEeccccccccHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHH
Confidence 1111223456788899999999986 89999999998852 11111110013334555543 78999999999999
Q ss_pred HHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEE
Q 038413 135 IKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177 (191)
Q Consensus 135 ~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~ 177 (191)
+.++.++. ++.++++ + +.+|+.|+++.+.+.+|.+.++.
T Consensus 194 ~~~~~~~~--~g~~~i~-~-~~~s~~e~~~~~~~~~g~~~~~~ 232 (273)
T 2ggs_A 194 LELLELRK--TGIIHVA-G-ERISRFELALKIKEKFNLPGEVK 232 (273)
T ss_dssp HHHHHHTC--CEEEECC-C-CCEEHHHHHHHHHHHTTCCSCEE
T ss_pred HHHHhcCc--CCeEEEC-C-CcccHHHHHHHHHHHhCCChhhc
Confidence 99998763 5689998 4 89999999999999999886654
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=124.79 Aligned_cols=170 Identities=12% Similarity=0.122 Sum_probs=125.5
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCcc-----EEEc-CC---ccc
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIK-----RFLP-SE---FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vk-----r~v~-s~---~g~ 54 (191)
+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+ ++ |||. |+ ||.
T Consensus 90 ~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~ 168 (381)
T 1n7h_A 90 ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGS 168 (381)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTT
T ss_pred CCCCCHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCC
Confidence 589999999999986 599999998643 346789999999998 87 8874 33 443
Q ss_pred CC---CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc-cc--------cCCCCCC-ceEEEecC
Q 038413 55 EE---DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN-VL--------LRPFEPH-DDVVVYGN 117 (191)
Q Consensus 55 ~~---~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~-~~--------~~~~~~~-~~~~~~~~ 117 (191)
.. .+.....|...|..+|..+|.+++. .+++++++|+...++++.. .+ ......+ .....+++
T Consensus 169 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 248 (381)
T 1n7h_A 169 TPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGN 248 (381)
T ss_dssp SCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESC
T ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCC
Confidence 21 1112234566788999999998865 3899999998766654321 10 0000011 23345677
Q ss_pred CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
++..+++++++|+|++++.++.++. ++.|++++ ++.+|+.|+++.+.+.+|.+.
T Consensus 249 ~~~~~~~v~v~Dva~a~~~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~ 302 (381)
T 1n7h_A 249 LQASRDWGFAGDYVEAMWLMLQQEK--PDDYVVAT-EEGHTVEEFLDVSFGYLGLNW 302 (381)
T ss_dssp TTCEEECEEHHHHHHHHHHHHTSSS--CCEEEECC-SCEEEHHHHHHHHHHHTTCCG
T ss_pred CCceeeeEEHHHHHHHHHHHHhCCC--CCeEEeeC-CCCCcHHHHHHHHHHHcCCCc
Confidence 8888999999999999999998865 47899985 789999999999999999863
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=122.03 Aligned_cols=171 Identities=11% Similarity=0.017 Sum_probs=113.9
Q ss_pred HHHHhhccCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccE--EEc-CC---cccCCCC----
Q 038413 8 KIVSILKEVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKR--FLP-SE---FGCEEDR---- 58 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr--~v~-s~---~g~~~~~---- 58 (191)
...+++.++|+|+|+++... .+++.++++++++.+ +++ |+. |+ ||.....
T Consensus 44 ~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~-~~~~~~i~~Ss~~vyg~~~~~~~~E 122 (298)
T 4b4o_A 44 LAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP-QPPKAWVLVTGVAYYQPSLTAEYDE 122 (298)
T ss_dssp HHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS-SCCSEEEEEEEGGGSCCCSSCCBCT
T ss_pred hhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC-CCceEEEEEeeeeeecCCCCCcccc
Confidence 34567889999999987421 345788999999887 554 664 32 4432221
Q ss_pred CCCCCCchhhHHHHHHHHHH--HHhcCCCeEEEecccccccccccc---cCCCCCCceEEEecCCcceeeecchhhHHHH
Q 038413 59 VRPLPPFEAYLEKKRIVRRA--IEAVEIPYTFVSANCYGAYFVNVL---LRPFEPHDDVVVYGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 59 ~~~~~~~~~~~~~k~~~e~~--l~~~~~~~tilrp~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~ 133 (191)
..+..|...+...+...|.. ..+.+++++++||+..++.....+ ... ...+....+|++++.++|||++|+|++
T Consensus 123 ~~p~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~-~~~~~~~~~g~g~~~~~~ihv~Dva~a 201 (298)
T 4b4o_A 123 DSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLP-FRLGLGGPIGSGHQFFPWIHIGDLAGI 201 (298)
T ss_dssp TCCCSCSSHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTSHHHHHHHHH-HHTTCCCCBTTSCSBCCEEEHHHHHHH
T ss_pred cCCccccchhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCCCchhHHHHH-HhcCCcceecccCceeecCcHHHHHHH
Confidence 11112222233333333333 234688999999999887542211 110 012233456888999999999999999
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHH
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEE 183 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~ 183 (191)
+..++++++. ++.|++++ ++.+|+.|+++.+++++|++.. ..+|...
T Consensus 202 ~~~~~~~~~~-~g~yn~~~-~~~~t~~e~~~~ia~~lgrp~~-~pvP~~~ 248 (298)
T 4b4o_A 202 LTHALEANHV-HGVLNGVA-PSSATNAEFAQTFGAALGRRAF-IPLPSAV 248 (298)
T ss_dssp HHHHHHCTTC-CEEEEESC-SCCCBHHHHHHHHHHHHTCCCC-CCBCHHH
T ss_pred HHHHHhCCCC-CCeEEEEC-CCccCHHHHHHHHHHHhCcCCc-ccCCHHH
Confidence 9999998764 56899996 7999999999999999998754 3456543
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-16 Score=119.13 Aligned_cols=165 Identities=15% Similarity=0.083 Sum_probs=123.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-----------cccHHHHHHHHHHcCCccEEEc-CC---cccCC-----CCCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-----------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEE-----DRVR 60 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-----------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~-----~~~~ 60 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++.+ ++|||. |+ |+... .+..
T Consensus 49 ~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~~~~~E~~ 127 (267)
T 3ay3_A 49 CDLADAQAVHDLVKDCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRTTRIDTEV 127 (267)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTTSCBCTTS
T ss_pred ccCCCHHHHHHHHcCCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCCCCCCCCC
Confidence 689999999999999999999998642 356789999999999 999874 33 33211 1112
Q ss_pred CCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHH
Q 038413 61 PLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIK 136 (191)
Q Consensus 61 ~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~ 136 (191)
...|...|..+|..+|.+++. .+++++++||+.+++. + .++....++++++|+|++++.
T Consensus 128 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~--~---------------~~~~~~~~~~~~~dva~~~~~ 190 (267)
T 3ay3_A 128 PRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPK--P---------------KDARMMATWLSVDDFMRLMKR 190 (267)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSS--C---------------CSHHHHHHBCCHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCC--C---------------CCCCeeeccccHHHHHHHHHH
Confidence 223556788999999988763 5899999999987631 0 123345789999999999999
Q ss_pred HhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhh
Q 038413 137 VINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189 (191)
Q Consensus 137 ~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (191)
++.++...++.+++.+ ++..++.++.++ +.+|.+.+ ++.++..+.+.
T Consensus 191 ~~~~~~~~~~~~~~~~-~~~~~~~d~~~~--~~lg~~p~---~~~~~~~~~~~ 237 (267)
T 3ay3_A 191 AFVAPKLGCTVVYGAS-ANTESWWDNDKS--AFLGWVPQ---DSSEIWREEIE 237 (267)
T ss_dssp HHHSSCCCEEEEEECC-SCSSCCBCCGGG--GGGCCCCC---CCGGGGHHHHH
T ss_pred HHhCCCCCceeEecCC-CccccccCHHHH--HHcCCCCC---CCHHHHHHHHH
Confidence 9998765457777774 677888898888 88897754 47777766553
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.7e-17 Score=132.99 Aligned_cols=168 Identities=13% Similarity=0.092 Sum_probs=109.1
Q ss_pred HHHhhccCcEEEEccCCC----------------CcccHHHHHHH-HHHcCCccEEEc-CC---cccCC-----CCCCCC
Q 038413 9 IVSILKEVDVVISTVAYP----------------QFLDQLKIVHA-IKVAGNIKRFLP-SE---FGCEE-----DRVRPL 62 (191)
Q Consensus 9 l~~a~~g~d~V~~~~~~~----------------~~~~~~~li~a-a~~~g~vkr~v~-s~---~g~~~-----~~~~~~ 62 (191)
+.+++.++|+|||+++.. ++.++.+++++ |++.+ +++||. |+ ||... .+.. .
T Consensus 195 ~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~-~ 272 (516)
T 3oh8_A 195 ASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHDRGDEILTEES-E 272 (516)
T ss_dssp CTTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSEEEEEEECTTS-C
T ss_pred hHHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCCCCCCccCCCC-C
Confidence 466788999999999864 24568999999 67777 999884 33 54111 1111 1
Q ss_pred CCchhhHHHHHHHHHHH---HhcCCCeEEEeccccccccc---ccccCCCCCCceEEEecCCcceeeecchhhHHHHHHH
Q 038413 63 PPFEAYLEKKRIVRRAI---EAVEIPYTFVSANCYGAYFV---NVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIK 136 (191)
Q Consensus 63 ~~~~~~~~~k~~~e~~l---~~~~~~~tilrp~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~ 136 (191)
.|...|...|...|..+ ...|++++++||+.++++.. +.+... ...+....++++++.+++||++|+|++++.
T Consensus 273 ~~~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~-~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~ 351 (516)
T 3oh8_A 273 SGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTL-FSTGLGGKFGDGTSWFSWIAIDDLTDIYYR 351 (516)
T ss_dssp CCSSHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTBSHHHHHHHT-TC---CCCCTTSCCEECEEEHHHHHHHHHH
T ss_pred CCcChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCCChHHHHHHH-HHhCCCcccCCCCceEceEeHHHHHHHHHH
Confidence 23445555666666543 45799999999999998542 111111 122223356788889999999999999999
Q ss_pred HhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHH
Q 038413 137 VINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEE 182 (191)
Q Consensus 137 ~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 182 (191)
++.++. .++.+++++ ++.+|+.|+++.+++.+|++. ...+|..
T Consensus 352 ~l~~~~-~~g~~ni~~-~~~~s~~el~~~i~~~~g~~~-~~~~p~~ 394 (516)
T 3oh8_A 352 AIVDAQ-ISGPINAVA-PNPVSNADMTKILATSMHRPA-FIQIPSL 394 (516)
T ss_dssp HHHCTT-CCEEEEESC-SCCEEHHHHHHHTTC--------------
T ss_pred HHhCcc-cCCcEEEEC-CCCCCHHHHHHHHHHHhCCCC-CCCCCHH
Confidence 999875 356889986 799999999999999999876 3344543
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.67 E-value=6e-16 Score=120.36 Aligned_cols=172 Identities=13% Similarity=0.015 Sum_probs=123.5
Q ss_pred CCCCCHHHHHHhhc-cCcEEEEccCCCC--------------cccHHHHHHHHHHcC----CccEEEc-CC---cccCC-
Q 038413 1 GELDEHEKIVSILK-EVDVVISTVAYPQ--------------FLDQLKIVHAIKVAG----NIKRFLP-SE---FGCEE- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~-g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g----~vkr~v~-s~---~g~~~- 56 (191)
+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.+ .++|||. |+ |+...
T Consensus 71 ~Dl~d~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~ 150 (342)
T 2hrz_A 71 ADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLP 150 (342)
T ss_dssp CCTTSTTHHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCC
T ss_pred cCCCCHHHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCC
Confidence 68999999999995 8999999998642 456789999998764 2688874 33 43221
Q ss_pred ---CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccc-ccccc-----c----cCCCCCCceEEEecCCc
Q 038413 57 ---DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGA-YFVNV-----L----LRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 57 ---~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~-~~~~~-----~----~~~~~~~~~~~~~~~g~ 119 (191)
++.....|..+|..+|..+|.++.+ .+++++++|++..++ ++... + ......+....++++++
T Consensus 151 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (342)
T 2hrz_A 151 YPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPES 230 (342)
T ss_dssp SSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTT
T ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCc
Confidence 1112223566788999999998865 368899999776654 22110 1 00011344455666666
Q ss_pred ceeeecchhhHHHHHHHHhcCccc---CCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPRT---CNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
...++++++|+|++++.+++.+.. .++.|+++ ++.+|+.|+++.+.+.+|.+.
T Consensus 231 ~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~--g~~~s~~e~~~~i~~~~g~~~ 286 (342)
T 2hrz_A 231 IRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP--GLSATVGEQIEALRKVAGEKA 286 (342)
T ss_dssp CEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC--CEEEEHHHHHHHHHHHHCHHH
T ss_pred cceeeEehHHHHHHHHHHHhccccccCCccEEEcC--CCCCCHHHHHHHHHHHcCccc
Confidence 778899999999999999987643 46889996 578999999999999999765
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-16 Score=115.70 Aligned_cols=143 Identities=14% Similarity=0.076 Sum_probs=104.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCch
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFE 66 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~ 66 (191)
+|+.|.+++.+++ +|+|||+++... ..+..+++++|++.+ ++|||. |+.+... .|..
T Consensus 53 ~D~~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~------~~~~ 123 (215)
T 2a35_A 53 GPLAELLPQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADA------KSSI 123 (215)
T ss_dssp SCHHHHGGGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT------TCSS
T ss_pred ccccCHHHHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCC------CCcc
Confidence 5778888888888 999999998642 456789999999999 999885 5543321 2345
Q ss_pred hhHHHHHHHHHHHHhcCCC-eEEEecccccccccc-cccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccC
Q 038413 67 AYLEKKRIVRRAIEAVEIP-YTFVSANCYGAYFVN-VLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTC 144 (191)
Q Consensus 67 ~~~~~k~~~e~~l~~~~~~-~tilrp~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~ 144 (191)
+|..+|..+|+++++.+++ |+++||+.++++... .+.. ........+ +++ ++++++++|+|++++.++.++.
T Consensus 124 ~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~-~~~~~~~~~-~~~--~~~~i~~~Dva~~~~~~~~~~~-- 197 (215)
T 2a35_A 124 FYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAE-ILAAPIARI-LPG--KYHGIEACDLARALWRLALEEG-- 197 (215)
T ss_dssp HHHHHHHHHHHHHTTSCCSEEEEEECCSEESTTSCEEGGG-GTTCCCC-----C--HHHHHHHHHHHHHHHHHHTCCC--
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEeCceeeCCCCcchHHH-HHHHhhhhc-cCC--CcCcEeHHHHHHHHHHHHhcCC--
Confidence 7889999999999999999 999999999986432 1111 111111122 222 5789999999999999999875
Q ss_pred CceeEeecCCCccCH
Q 038413 145 NRIVIYRPQTNIISQ 159 (191)
Q Consensus 145 ~~~~~i~~~~~~~t~ 159 (191)
++.+++++ ++.+++
T Consensus 198 ~~~~~i~~-~~~~~~ 211 (215)
T 2a35_A 198 KGVRFVES-DELRKL 211 (215)
T ss_dssp SEEEEEEH-HHHHHH
T ss_pred CCceEEcH-HHHHHh
Confidence 78888885 555444
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=5.7e-15 Score=108.19 Aligned_cols=141 Identities=14% Similarity=0.164 Sum_probs=103.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCC-----CCCch-hhHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRP-----LPPFE-AYLEKKR 73 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~-----~~~~~-~~~~~k~ 73 (191)
+|+.|.+++.++++++|+|||+++..+++ +++++++|++.| ++|+|. |+.+........ ..... .|..+|.
T Consensus 59 ~D~~d~~~~~~~~~~~d~vv~~ag~~n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~ 136 (221)
T 3r6d_A 59 GSFQNPGXLEQAVTNAEVVFVGAMESGSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGER 136 (221)
T ss_dssp CCTTCHHHHHHHHTTCSEEEESCCCCHHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHH
T ss_pred CCCCCHHHHHHHHcCCCEEEEcCCCCChh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccccccccccccHHHHHHH
Confidence 69999999999999999999999977777 899999999999 999884 443322111000 00011 6788999
Q ss_pred HHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCC-cceeeecchhhHHHHHHHHh--cCcc-cCCceeE
Q 038413 74 IVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG-EAKAVFNYEEDIAKCTIKVI--NDPR-TCNRIVI 149 (191)
Q Consensus 74 ~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~i~~~Dva~~~~~~l--~~~~-~~~~~~~ 149 (191)
.+|+++++++++|+++|||+++++.... .+.....+ .....+++.+|+|++++.++ .++. ..++.+.
T Consensus 137 ~~e~~~~~~~i~~~~vrpg~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~ 207 (221)
T 3r6d_A 137 QARNVLRESNLNYTILRLTWLYNDPEXT---------DYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIG 207 (221)
T ss_dssp HHHHHHHHSCSEEEEEEECEEECCTTCC---------CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEE
T ss_pred HHHHHHHhCCCCEEEEechhhcCCCCCc---------ceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceee
Confidence 9999999999999999999988752111 11111111 11234789999999999999 8775 5688888
Q ss_pred eec
Q 038413 150 YRP 152 (191)
Q Consensus 150 i~~ 152 (191)
+.+
T Consensus 208 i~~ 210 (221)
T 3r6d_A 208 VGE 210 (221)
T ss_dssp EEC
T ss_pred ecC
Confidence 874
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.63 E-value=9.9e-15 Score=108.06 Aligned_cols=141 Identities=15% Similarity=0.192 Sum_probs=99.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCc-ccHHHHHHHHHHcCCccEEEc-CCcccCCCCCC-----CCCCchhhHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQF-LDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVR-----PLPPFEAYLEKKR 73 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~-~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~-----~~~~~~~~~~~k~ 73 (191)
+|+.|.+++.++++++|+|||+++.... ..+.+++++|++.| ++|||. |+.+....... .......+...+.
T Consensus 74 ~Dl~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (236)
T 3qvo_A 74 GDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFR 152 (236)
T ss_dssp CCTTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTT-CCEEEEECCCCC----------------CGGGHHHH
T ss_pred ecCCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcccchHHHHH
Confidence 6999999999999999999999987653 34688999999999 999884 44332111100 0001123445677
Q ss_pred HHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCC-cceeeecchhhHHHHHHHHhcCcc-cCCceeEee
Q 038413 74 IVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG-EAKAVFNYEEDIAKCTIKVINDPR-TCNRIVIYR 151 (191)
Q Consensus 74 ~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i~ 151 (191)
.+++++++.|++|+++|||++++..... ......+ .....+++.+|||++++.++.++. ..++.+.++
T Consensus 153 ~~~~~l~~~gi~~~~vrPg~i~~~~~~~----------~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~ 222 (236)
T 3qvo_A 153 RAADAIEASGLEYTILRPAWLTDEDIID----------YELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGIN 222 (236)
T ss_dssp HHHHHHHTSCSEEEEEEECEEECCSCCC----------CEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEE
T ss_pred HHHHHHHHCCCCEEEEeCCcccCCCCcc----------eEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEec
Confidence 7888998899999999999988753211 1111112 112357999999999999999886 668999998
Q ss_pred c
Q 038413 152 P 152 (191)
Q Consensus 152 ~ 152 (191)
+
T Consensus 223 ~ 223 (236)
T 3qvo_A 223 Q 223 (236)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.7e-15 Score=116.73 Aligned_cols=164 Identities=17% Similarity=0.140 Sum_probs=111.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHc-CCccEEEc-CCcc----cCCC---
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVA-GNIKRFLP-SEFG----CEED--- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~-g~vkr~v~-s~~g----~~~~--- 57 (191)
||+.|.+++.++++++|+|||+++... +.++.+++++|++. + ++|||. |+.. ....
T Consensus 60 ~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~ 138 (322)
T 2p4h_X 60 ADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDV 138 (322)
T ss_dssp CCTTCGGGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSE
T ss_pred cCCCCHHHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCee
Confidence 689999999999999999999986431 34578999999998 8 999884 3321 1110
Q ss_pred --CCCCC--------CCc-hhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC-----C-C-CCCceEEEe
Q 038413 58 --RVRPL--------PPF-EAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR-----P-F-EPHDDVVVY 115 (191)
Q Consensus 58 --~~~~~--------~~~-~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~-----~-~-~~~~~~~~~ 115 (191)
+.... .|. ..|..+|..+|.++.+ .|++++++||+.+++++...... . . ..+.... .
T Consensus 139 ~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~-~ 217 (322)
T 2p4h_X 139 LDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQ-I 217 (322)
T ss_dssp ECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGG-C
T ss_pred cCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCcc-C
Confidence 00000 111 1577899988887653 68999999999988764321100 0 0 0111111 1
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
+. ...++++++|+|++++.++.++...++ ++++ ++.+|+.|+++.+.+..+
T Consensus 218 ~~--~~~~~i~v~Dva~a~~~~~~~~~~~g~-~~~~--~~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 218 GV--TRFHMVHVDDVARAHIYLLENSVPGGR-YNCS--PFIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp CE--EEEEEEEHHHHHHHHHHHHHSCCCCEE-EECC--CEEEEHHHHHHHHHHHCT
T ss_pred cC--CCcCEEEHHHHHHHHHHHhhCcCCCCC-EEEc--CCCCCHHHHHHHHHHhCC
Confidence 11 235899999999999999987653344 6643 688999999999998875
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.62 E-value=6.5e-16 Score=113.26 Aligned_cols=149 Identities=10% Similarity=0.036 Sum_probs=99.5
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCC--------CcccHHHHHHHHHHcCCccEEE-cCCccc---CCCC-------CCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYP--------QFLDQLKIVHAIKVAGNIKRFL-PSEFGC---EEDR-------VRP 61 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~--------~~~~~~~li~aa~~~g~vkr~v-~s~~g~---~~~~-------~~~ 61 (191)
+|+.|.++ +++.++|+|||+++.. +..++.+++++|+++| +|+| .|+.+. .... ...
T Consensus 50 ~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~ 125 (224)
T 3h2s_A 50 KEPLVLTE--ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPES 125 (224)
T ss_dssp CCGGGCCH--HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGG
T ss_pred cccccccH--hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCC
Confidence 58888887 7899999999999874 2577899999999998 5555 454321 1110 000
Q ss_pred CCCchhhHHHHHHHHHH--H-HhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 62 LPPFEAYLEKKRIVRRA--I-EAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 62 ~~~~~~~~~~k~~~e~~--l-~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
..|...|..+|...|.. + ++++++|+++||+.++++..... .......+. .+....++++++|+|++++.++
T Consensus 126 ~~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~---~~~~~~~~i~~~DvA~~~~~~l 200 (224)
T 3h2s_A 126 AASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPATS--YVAGKDTLL---VGEDGQSHITTGNMALAILDQL 200 (224)
T ss_dssp GGGSTTHHHHHHHHHHHHHHTTCTTSCEEEEEECSBCCCCCCCC--EEEESSBCC---CCTTSCCBCCHHHHHHHHHHHH
T ss_pred CccchhhHHHHHHHHHHHHHHhcCCCcEEEEcCccccCCCcccC--ceecccccc---cCCCCCceEeHHHHHHHHHHHh
Confidence 11245677888888744 2 24689999999999997622110 000111111 1234578999999999999999
Q ss_pred cCcccCCceeEeecCCCccCH
Q 038413 139 NDPRTCNRIVIYRPQTNIISQ 159 (191)
Q Consensus 139 ~~~~~~~~~~~i~~~~~~~t~ 159 (191)
++++..++.|++++ .+..+.
T Consensus 201 ~~~~~~g~~~~~~~-~~~~~~ 220 (224)
T 3h2s_A 201 EHPTAIRDRIVVRD-ADLEHH 220 (224)
T ss_dssp HSCCCTTSEEEEEE-CC----
T ss_pred cCccccCCEEEEec-Ccchhc
Confidence 99988899999985 454443
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.1e-15 Score=117.05 Aligned_cols=166 Identities=16% Similarity=0.165 Sum_probs=111.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHcCCccEEEc-CCcc----cCC-----
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVAGNIKRFLP-SEFG----CEE----- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g~vkr~v~-s~~g----~~~----- 56 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++++.++|||. |+.+ ...
T Consensus 63 ~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~ 142 (337)
T 2c29_D 63 ADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVY 142 (337)
T ss_dssp CCTTSTTTTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEE
T ss_pred cCCCCHHHHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCccc
Confidence 689999999999999999999987532 3456899999998764789884 4322 110
Q ss_pred CCCCCC---------CCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccCC----C---CCCceEEEec
Q 038413 57 DRVRPL---------PPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLRP----F---EPHDDVVVYG 116 (191)
Q Consensus 57 ~~~~~~---------~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~~----~---~~~~~~~~~~ 116 (191)
++.... .|.++|..+|..+|.++.+ .|++++++||+..++++....... . ..+... .++
T Consensus 143 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~ 221 (337)
T 2c29_D 143 DESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYS 221 (337)
T ss_dssp CTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHH
T ss_pred CcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-ccc
Confidence 011000 1334677899999987643 589999999999887642211000 0 000000 111
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
.+ ....++|++|+|++++.+++++.. ++.++++ +..+|+.|+++.+.+.++
T Consensus 222 ~~-~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~--~~~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 222 II-RQGQFVHLDDLCNAHIYLFENPKA-EGRYICS--SHDCIILDLAKMLREKYP 272 (337)
T ss_dssp HH-TEEEEEEHHHHHHHHHHHHHCTTC-CEEEEEC--CEEEEHHHHHHHHHHHCT
T ss_pred cc-CCCCEEEHHHHHHHHHHHhcCccc-CceEEEe--CCCCCHHHHHHHHHHHCC
Confidence 11 124599999999999999987643 3455554 567999999999999874
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-14 Score=109.02 Aligned_cols=164 Identities=13% Similarity=0.070 Sum_probs=119.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC-----------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC-----CCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ-----------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED-----RVR 60 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~-----------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~-----~~~ 60 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++.+ ++|+|. |+ +|.... +..
T Consensus 50 ~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~~~~~e~~ 128 (267)
T 3rft_A 50 CDLADANAVNAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQTERLGPDV 128 (267)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTTSCBCTTS
T ss_pred cCCCCHHHHHHHHcCCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCCCCCCCCC
Confidence 699999999999999999999998642 466789999999999 999884 33 332111 112
Q ss_pred CCCCchhhHHHHHHHHHHHH----hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHH
Q 038413 61 PLPPFEAYLEKKRIVRRAIE----AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIK 136 (191)
Q Consensus 61 ~~~~~~~~~~~k~~~e~~l~----~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~ 136 (191)
...|...|..+|..+|.+++ +.+++++++||+.+++. +.++....++++++|+++++..
T Consensus 129 ~~~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~-----------------~~~~~~~~~~~~~~d~a~~~~~ 191 (267)
T 3rft_A 129 PARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPE-----------------PNNYRMLSTWFSHDDFVSLIEA 191 (267)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSS-----------------CCSTTHHHHBCCHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCC-----------------CCCCCceeeEEcHHHHHHHHHH
Confidence 22455678889999998875 36899999999987753 1234455788999999999999
Q ss_pred HhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHh
Q 038413 137 VINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLS 188 (191)
Q Consensus 137 ~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~ 188 (191)
+++.++..+..+++.+ ++..++.++... +.+|.+.+ .+.++|.+.+
T Consensus 192 ~~~~~~~~~~~~~~~s-~~~~~~~~~~~~--~~~g~~p~---~~~~~~~~~l 237 (267)
T 3rft_A 192 VFRAPVLGCPVVWGAS-ANDAGWWDNSHL--GFLGWKPK---DNAEAFRRHI 237 (267)
T ss_dssp HHHCSCCCSCEEEECC-CCTTCCBCCGGG--GGGCCCCC---CCGGGGHHHH
T ss_pred HHhCCCCCceEEEEeC-CCCCCcccChhH--HHCCCCCC---CCHHHHHHHH
Confidence 9998876667777774 567777666433 56776433 2446665555
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.7e-15 Score=116.50 Aligned_cols=167 Identities=13% Similarity=0.080 Sum_probs=110.3
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------------cccHHHHHHHHHHcCCccEEEc-CCcc----c-------
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------------FLDQLKIVHAIKVAGNIKRFLP-SEFG----C------- 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------------~~~~~~li~aa~~~g~vkr~v~-s~~g----~------- 54 (191)
+|+.|.+++.++++++|+|||+++... +.++.+++++|++++.++|||. |+.+ .
T Consensus 66 ~Dl~d~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~ 145 (338)
T 2rh8_A 66 ADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGL 145 (338)
T ss_dssp CCTTTSSSSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCC
T ss_pred cCCCChHHHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCc
Confidence 689999999999999999999987531 3457899999999833899884 4321 1
Q ss_pred CCCCCCCC-----CC----chhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccCCC-------CCCceEEE
Q 038413 55 EEDRVRPL-----PP----FEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLRPF-------EPHDDVVV 114 (191)
Q Consensus 55 ~~~~~~~~-----~~----~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~~~-------~~~~~~~~ 114 (191)
..++.... .| .++|..+|..+|.++.+ .|++++++||+.+++++........ ..+... .
T Consensus 146 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~ 224 (338)
T 2rh8_A 146 VVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-L 224 (338)
T ss_dssp CCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-H
T ss_pred ccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-c
Confidence 11111100 01 11477788888877643 5899999999999886432110000 011111 1
Q ss_pred ecC------CcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 115 YGN------GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 115 ~~~------g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
++. +...++++|++|+|++++.+++++.. ++.++++ ++.+|+.|+++.+.+..+
T Consensus 225 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~--~~~~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 225 INGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESA-SGRYICC--AANTSVPELAKFLSKRYP 284 (338)
T ss_dssp HHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTC-CEEEEEC--SEEECHHHHHHHHHHHCT
T ss_pred cccccccccccCcccEEEHHHHHHHHHHHHcCCCc-CCcEEEe--cCCCCHHHHHHHHHHhCC
Confidence 111 01234899999999999999987643 4456665 467999999999999886
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.46 E-value=9.5e-14 Score=102.84 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=95.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchh
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEA 67 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~ 67 (191)
+|+.|.+++.++++++|+|||+++... ..++.+++++|++.+ ++|+|. |+.+... .+..+
T Consensus 70 ~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~------~~~~~ 142 (242)
T 2bka_A 70 VDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADK------SSNFL 142 (242)
T ss_dssp CCGGGGGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT------TCSSH
T ss_pred cCcCCHHHHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCC------CCcch
Confidence 589999999999999999999998642 456789999999999 999874 5543321 12446
Q ss_pred hHHHHHHHHHHHHhcCCC-eEEEecccccccccccccCCCCCCceE-EEecCCcceeeecchhhHHHHHHHHhcCcccC
Q 038413 68 YLEKKRIVRRAIEAVEIP-YTFVSANCYGAYFVNVLLRPFEPHDDV-VVYGNGEAKAVFNYEEDIAKCTIKVINDPRTC 144 (191)
Q Consensus 68 ~~~~k~~~e~~l~~~~~~-~tilrp~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~ 144 (191)
|..+|..+|.+++..+++ ++++|||.++++............... ..+.. .....+++++|+|++++.++.++..+
T Consensus 143 Y~~sK~~~e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~~~~~~~~~ 220 (242)
T 2bka_A 143 YLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDS-WASGHSVPVVTVVRAMLNNVVRPRDK 220 (242)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTT-GGGGTEEEHHHHHHHHHHHHTSCCCS
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCcc-ccCCcccCHHHHHHHHHHHHhCcccc
Confidence 889999999999999995 999999999876422100000000000 01100 01134899999999999999987643
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.23 E-value=6.1e-12 Score=93.58 Aligned_cols=157 Identities=5% Similarity=-0.014 Sum_probs=99.4
Q ss_pred CCCCCHHHHHHhhc----cCcEEEEccCCCC------------cccHHHHHHHHHH----cCCccEEEc-CCcccCCCC-
Q 038413 1 GELDEHEKIVSILK----EVDVVISTVAYPQ------------FLDQLKIVHAIKV----AGNIKRFLP-SEFGCEEDR- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~----g~d~V~~~~~~~~------------~~~~~~li~aa~~----~g~vkr~v~-s~~g~~~~~- 58 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..++++++.+ .+ .+|+|. |+.......
T Consensus 44 ~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~ 122 (255)
T 2dkn_A 44 TPGGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGA 122 (255)
T ss_dssp SHHHHHHHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTG
T ss_pred CCcccHHHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccc
Confidence 47778888888886 7999999998643 3455677776654 36 678774 442211110
Q ss_pred CCC---------------------CCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCc
Q 038413 59 VRP---------------------LPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHD 110 (191)
Q Consensus 59 ~~~---------------------~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~ 110 (191)
... ..+...|..+|..++.+++. .|++++++|||.++++.............
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~ 202 (255)
T 2dkn_A 123 AELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGE 202 (255)
T ss_dssp GGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHH
T ss_pred cccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHH
Confidence 000 02344677899988887654 48999999999988765433211111111
Q ss_pred eEEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHH
Q 038413 111 DVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLE 161 (191)
Q Consensus 111 ~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e 161 (191)
...... + ....+++++|+|++++.++.++. ..++.+++++ +..+|+.|
T Consensus 203 ~~~~~~-~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-g~~~~~~e 252 (255)
T 2dkn_A 203 STRRFV-A-PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDG-GMDALMRA 252 (255)
T ss_dssp HHHSCC-C-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-THHHHHCT
T ss_pred HHHHHH-H-HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecC-CeEeeeec
Confidence 110010 1 23468999999999999998762 3478899985 67776654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=5.7e-11 Score=89.61 Aligned_cols=163 Identities=10% Similarity=0.077 Sum_probs=105.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccHHHHHHHHHH----cCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQLKIVHAIKV----AGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~~~li~aa~~----~g~vkr~v 48 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..++++++.. .+ ..++|
T Consensus 71 ~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv 149 (278)
T 2bgk_A 71 CDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIV 149 (278)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEE
Confidence 58999999988876 7899999998531 2234555665554 46 67877
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEE-E-ecCC
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV-V-YGNG 118 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~-~-~~~g 118 (191)
. |+....... ..+...|..+|..++.+++. .|+.++++|||++.+......... ...... + ....
T Consensus 150 ~isS~~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~ 224 (278)
T 2bgk_A 150 FTASISSFTAG---EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV--DSSRVEELAHQAA 224 (278)
T ss_dssp EECCGGGTCCC---TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC--CHHHHHHHHHHTC
T ss_pred EEeeccccCCC---CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc--chhHHHHhhhccc
Confidence 4 442221111 01345678899988877653 489999999999887543221110 000000 0 0011
Q ss_pred cceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHHHHHHHh
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELISLWEQKT 170 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~ 170 (191)
.....+++.+|+|++++.++.++. ..++.+++.| +..+++.|+++++++.+
T Consensus 225 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-g~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 225 NLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDG-GYTRTNPAFPTALKHGL 277 (278)
T ss_dssp SSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGCCTHHHHHSCSCC
T ss_pred ccccccCCHHHHHHHHHHHcCcccccCCCCEEEECC-cccccCCccchhhhhhc
Confidence 112457899999999999987643 2378899985 78999999999987654
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.08 E-value=2.7e-10 Score=82.17 Aligned_cols=122 Identities=14% Similarity=0.156 Sum_probs=86.7
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEEc-CCcccCCC
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEED 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~ 57 (191)
+|+.|.+++.++++ ++|+|||+++... ..+..++++++++.+ ..++|. |+......
T Consensus 49 ~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~ 127 (207)
T 2yut_A 49 ADLADELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQ 127 (207)
T ss_dssp CCTTSHHHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHS
T ss_pred eeCCCHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccC
Confidence 59999999999998 8999999998532 234567888887777 788774 44221111
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhH
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDI 130 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dv 130 (191)
..+...|..+|..++.+++. .|++++++|||++.+..... .+.....+++++|+
T Consensus 128 ----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~---------------~~~~~~~~~~~~dv 188 (207)
T 2yut_A 128 ----VPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP---------------LGGPPKGALSPEEA 188 (207)
T ss_dssp ----STTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG---------------GTSCCTTCBCHHHH
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc---------------cCCCCCCCCCHHHH
Confidence 12355677899988877653 58999999999887654211 11223578999999
Q ss_pred HHHHHHHhcCcc
Q 038413 131 AKCTIKVINDPR 142 (191)
Q Consensus 131 a~~~~~~l~~~~ 142 (191)
|++++.++.++.
T Consensus 189 a~~~~~~~~~~~ 200 (207)
T 2yut_A 189 ARKVLEGLFREP 200 (207)
T ss_dssp HHHHHHHHC--C
T ss_pred HHHHHHHHhCCC
Confidence 999999998764
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.00 E-value=7e-10 Score=83.91 Aligned_cols=164 Identities=13% Similarity=0.131 Sum_probs=103.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|+|||+++... +.+ +++++..+++.+ ..++|.
T Consensus 58 ~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~ 136 (281)
T 3m1a_A 58 LDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNI 136 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred eeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999999888876 7899999998631 223 566777778888 788774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc----C--CCCCC--ceEEE
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL----R--PFEPH--DDVVV 114 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~----~--~~~~~--~~~~~ 114 (191)
|+...... ..+...|..+|..++.+.+. .|+..++++||++..+...... . ..... .....
T Consensus 137 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (281)
T 3m1a_A 137 SSFGGQLS----FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQ 212 (281)
T ss_dssp CCGGGTCC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHH
T ss_pred cCccccCC----CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHH
Confidence 44322111 13456788899988877653 5899999999987664322110 0 00000 00000
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
...+....++.+++|+|++++.++.++.. +..+++++ +......+.+..+.+.++
T Consensus 213 ~~~~~~~~~~~~~~dva~a~~~~~~~~~~-~~~~~l~s-~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 213 LVQGSDGSQPGDPAKAAAAIRLALDTEKT-PLRLALGG-DAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp HHHC-----CBCHHHHHHHHHHHHHSSSC-CSEEEESH-HHHHHHHHHHHHHHHHHH
T ss_pred HHhhccCCCCCCHHHHHHHHHHHHhCCCC-CeEEecCc-hHHHHHHHHHHHHHHHHH
Confidence 11112234678999999999999998753 56788874 566666777776666554
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=3.2e-09 Score=78.93 Aligned_cols=149 Identities=9% Similarity=0.131 Sum_probs=94.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------cccHHHHHHHH----HHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLDQLKIVHAI----KVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~~~~li~aa----~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..++++++ ++.+ .+++|. |
T Consensus 67 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~s 145 (255)
T 1fmc_A 67 CDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTIT 145 (255)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEc
Confidence 58999999988876 7999999998532 23344555555 4567 778774 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+...... ..+...|..+|..++.+++. .++.+++++||++.++........... .....+.....
T Consensus 146 S~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~ 217 (255)
T 1fmc_A 146 SMAAENK----NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIE----QKMLQHTPIRR 217 (255)
T ss_dssp CGGGTCC----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHH----HHHHHTCSSCS
T ss_pred chhhcCC----CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHH----HHHHhcCCccc
Confidence 4322111 12355678899988877653 488999999999887543221100000 00000111134
Q ss_pred ecchhhHHHHHHHHhcCccc--CCceeEeecCCCccCH
Q 038413 124 FNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNIISQ 159 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~t~ 159 (191)
+++++|+|++++.++.++.. .++.+++++ +...|+
T Consensus 218 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-g~~~s~ 254 (255)
T 1fmc_A 218 LGQPQDIANAALFLCSPAASWVSGQILTVSG-GGVQEL 254 (255)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TSCCCC
T ss_pred CCCHHHHHHHHHHHhCCccccCCCcEEEECC-ceeccC
Confidence 67899999999999976532 378899985 666653
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.97 E-value=2.3e-09 Score=80.89 Aligned_cols=163 Identities=10% Similarity=0.093 Sum_probs=88.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHH----cCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKV----AGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~----~g~vkr 46 (191)
+|++|.+++.++++ ++|+|||+++... +.+..++++++.. .+ .+
T Consensus 65 ~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~ 142 (278)
T 1spx_A 65 ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GE 142 (278)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--Ce
Confidence 58999999988876 7999999998531 1123344444443 34 46
Q ss_pred EE-cCCccc-CCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCce----EE
Q 038413 47 FL-PSEFGC-EEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDD----VV 113 (191)
Q Consensus 47 ~v-~s~~g~-~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~----~~ 113 (191)
+| .|+... ... ..+...|..+|..++.+.+. .|+.++.++||++..+.............. ..
T Consensus 143 iv~isS~~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~ 218 (278)
T 1spx_A 143 IVNISSIASGLHA----TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMA 218 (278)
T ss_dssp EEEECCTTSSSSC----CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHH
T ss_pred EEEEecccccccC----CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHH
Confidence 65 344322 111 12244677899988877653 589999999999876542221000000000 00
Q ss_pred EecCCcceeeecchhhHHHHHHHHhcCccc---CCceeEeecCCCccCHHHHHHHHHHHh
Q 038413 114 VYGNGEAKAVFNYEEDIAKCTIKVINDPRT---CNRIVIYRPQTNIISQLELISLWEQKT 170 (191)
Q Consensus 114 ~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~~i~~~~~~~t~~e~~~~~~~~~ 170 (191)
..........+++.+|+|++++.++.++.. -++.+.+.| +..+++.|+++++++++
T Consensus 219 ~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdg-G~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 219 TMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG-GSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp HHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST-TGGGC------------
T ss_pred HHHhcCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECC-CcccccCcccccHHHHh
Confidence 000000012468999999999998876542 378899985 78999999999998865
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.7e-08 Score=72.44 Aligned_cols=131 Identities=11% Similarity=0.020 Sum_probs=87.2
Q ss_pred CCCCCHHHHHHhhcc---CcEEEEccCCCC-------------------cccHHHHHHHHHHcC-CccEEEc-CCcccCC
Q 038413 1 GELDEHEKIVSILKE---VDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG-NIKRFLP-SEFGCEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g---~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g-~vkr~v~-s~~g~~~ 56 (191)
+|+.|.+++.+++++ +|+|||+++... ..+..++++++.+.- .-.+++. |+.....
T Consensus 41 ~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~ 120 (202)
T 3d7l_A 41 VDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED 120 (202)
T ss_dssp CCTTCHHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS
T ss_pred eecCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC
Confidence 589999999998876 799999998531 234567888887651 0135553 4422111
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhH
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDI 130 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dv 130 (191)
. ..+...|..+|..++.+++. .++.++++|||++.+..... +.+....++++++|+
T Consensus 121 ~----~~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~--------------~~~~~~~~~~~~~dv 182 (202)
T 3d7l_A 121 P----IVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDKL--------------EPFFEGFLPVPAAKV 182 (202)
T ss_dssp C----CTTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHHH--------------GGGSTTCCCBCHHHH
T ss_pred C----CCccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhhh--------------hhhccccCCCCHHHH
Confidence 1 12345677899999988764 37899999999988753211 111123578999999
Q ss_pred HHHHHHHhcCcccCCceeEe
Q 038413 131 AKCTIKVINDPRTCNRIVIY 150 (191)
Q Consensus 131 a~~~~~~l~~~~~~~~~~~i 150 (191)
|++++.++... ..++.+++
T Consensus 183 a~~~~~~~~~~-~~G~~~~v 201 (202)
T 3d7l_A 183 ARAFEKSVFGA-QTGESYQV 201 (202)
T ss_dssp HHHHHHHHHSC-CCSCEEEE
T ss_pred HHHHHHhhhcc-ccCceEec
Confidence 99998888432 33566665
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=6.9e-10 Score=84.70 Aligned_cols=164 Identities=9% Similarity=0.002 Sum_probs=101.7
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHH-----HcCCccEEEc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIK-----VAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~-----~~g~vkr~v~ 49 (191)
+|+.|.+++.++++. .|+|||+++... +.+..++++++. +.+ ..++|.
T Consensus 83 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~iv~ 161 (302)
T 1w6u_A 83 CDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-GAAFLS 161 (302)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEE
T ss_pred eCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CCEEEE
Confidence 589999999888764 499999998531 123344555543 234 467663
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+... ..+...|..+|..++.+.+. .|+.+++++||++.+..+...... .............
T Consensus 162 isS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~p 234 (302)
T 1w6u_A 162 ITTIYAETG-----SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP--TGTFEKEMIGRIP 234 (302)
T ss_dssp ECCTHHHHC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT--TSHHHHHHHTTCT
T ss_pred EcccccccC-----CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhccc--chhhHHHHHhcCC
Confidence 43 23211 12345678899988877653 589999999998876422110000 0000000001111
Q ss_pred eeeecchhhHHHHHHHHhcCccc--CCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
...+++++|+|++++.++.++.. .++.+++.| +..++..++++.+.+..|+.
T Consensus 235 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-g~~~~~~~~~~~~~~~~g~~ 288 (302)
T 1w6u_A 235 CGRLGTVEELANLAAFLCSDYASWINGAVIKFDG-GEEVLISGEFNDLRKVTKEQ 288 (302)
T ss_dssp TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST-THHHHHHSTTGGGGGCCHHH
T ss_pred cCCCCCHHHHHHHHHHHcCCcccccCCCEEEECC-CeeeccCCccccchhhcccc
Confidence 12467899999999999876432 478899985 78899999988888877654
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=98.83 E-value=5e-08 Score=72.99 Aligned_cols=146 Identities=8% Similarity=0.032 Sum_probs=82.8
Q ss_pred CCCCCHHHHHHhh--------ccCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc
Q 038413 1 GELDEHEKIVSIL--------KEVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~--------~g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~ 49 (191)
+|+.|.+++.+++ .+.|+|||+++... +.+..++++++ ++.+ ..++|.
T Consensus 70 ~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~ 148 (266)
T 1xq1_A 70 CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIF 148 (266)
T ss_dssp CCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 5889998888877 46899999998532 22345666666 5667 788774
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+...... ..+...|..+|..++.+.+. .|+.+++++||++.+............ .........
T Consensus 149 isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~ 220 (266)
T 1xq1_A 149 MSSIAGVVS----ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFK----KVVISRKPL 220 (266)
T ss_dssp EC--------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------
T ss_pred EccchhccC----CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHH----HHHHhcCCC
Confidence 44221111 12244677899988877653 489999999999887643321110000 000011111
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
..+++.+|+|++++.++.++. ..++.+.+.| +..
T Consensus 221 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-G~~ 256 (266)
T 1xq1_A 221 GRFGEPEEVSSLVAFLCMPAASYITGQTICVDG-GLT 256 (266)
T ss_dssp ---CCGGGGHHHHHHHTSGGGTTCCSCEEECCC-CEE
T ss_pred CCCcCHHHHHHHHHHHcCccccCccCcEEEEcC-Ccc
Confidence 246899999999999887643 2378888885 443
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.81 E-value=2.9e-08 Score=73.53 Aligned_cols=145 Identities=11% Similarity=0.101 Sum_probs=91.0
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cc----cHHHHHHHHHHcCCc-cEEEc
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FL----DQLKIVHAIKVAGNI-KRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~----~~~~li~aa~~~g~v-kr~v~ 49 (191)
+|+.|.+++.++++. +|+|||+++... +. ..+.++..+++.+ . .++|.
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~ 139 (251)
T 1zk4_A 61 HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIIN 139 (251)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEE
Confidence 589999998888764 899999998532 11 2345667777777 7 78774
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHH---------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE---------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|+...... ..+...|..+|..++.+.+ ..++.+++++||++.++......... .........
T Consensus 140 isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~ 211 (251)
T 1zk4_A 140 MSSIEGFVG----DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE----EAMSQRTKT 211 (251)
T ss_dssp ECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH----HHHTSTTTC
T ss_pred eCCchhccC----CCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchh----hhHHHhhcC
Confidence 44321111 1234567789988886654 35789999999998876433211000 000000111
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCC
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTN 155 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~ 155 (191)
....+++.+|+|++++.++.++. ..++.+.+.| +.
T Consensus 212 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-G~ 248 (251)
T 1zk4_A 212 PMGHIGEPNDIAYICVYLASNESKFATGSEFVVDG-GY 248 (251)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TG
T ss_pred CCCCCcCHHHHHHHHHHHcCcccccccCcEEEECC-Cc
Confidence 11247899999999999998653 2378888885 44
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.1e-07 Score=69.10 Aligned_cols=150 Identities=7% Similarity=0.083 Sum_probs=83.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 53 ~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~i 131 (250)
T 2fwm_X 53 MDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTV 131 (250)
T ss_dssp CCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999999988875 6899999998532 22334455555 5666 678763
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCc-eEEE----ecC
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHD-DVVV----YGN 117 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~-~~~~----~~~ 117 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++..+............. .+.- +..
T Consensus 132 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (250)
T 2fwm_X 132 ASDAAHTP----RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKL 207 (250)
T ss_dssp CCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------
T ss_pred CchhhCCC----CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccc
Confidence 44322111 12345677899988877653 48999999999987754322110000000 0000 000
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
......+.+.+|+|++++.++.++. .-++.+.+.| +..
T Consensus 208 ~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG-G~~ 247 (250)
T 2fwm_X 208 GIPLGKIARPQEIANTILFLASDLASHITLQDIVVDG-GST 247 (250)
T ss_dssp --------CHHHHHHHHHHHHSGGGTTCCSCEEEEST-TTT
T ss_pred cCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC-Ccc
Confidence 1111236789999999999988753 2478888885 443
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.78 E-value=6.3e-09 Score=78.71 Aligned_cols=165 Identities=11% Similarity=0.142 Sum_probs=103.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHH----cCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKV----AGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~----~g~vkr~v~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++.. .+ -.++|.
T Consensus 70 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~ 148 (281)
T 3svt_A 70 TDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVG 148 (281)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 58999998888775 5799999998621 2234455555543 33 336663
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
||....... .+...|..+|..++.+.+. .|+....++||+............ ......+......
T Consensus 149 isS~~~~~~~----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~p~ 221 (281)
T 3svt_A 149 ISSIAASNTH----RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES---AELSSDYAMCTPL 221 (281)
T ss_dssp ECCHHHHSCC----TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC---HHHHHHHHHHCSS
T ss_pred EeCHHHcCCC----CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC---HHHHHHHHhcCCC
Confidence 442211111 2245678899988877653 478899999998876543321110 0000000001111
Q ss_pred eeecchhhHHHHHHHHhcCccc--CCceeEeecCCCccC-HHHHHHHHHHHhCCce
Q 038413 122 AVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNIIS-QLELISLWEQKTGRSF 174 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~t-~~e~~~~~~~~~g~~~ 174 (191)
..+.+.+|+|++++.++.++.. -++.+.+.| +..++ ..++++++.+.+|++.
T Consensus 222 ~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdg-G~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 222 PRQGEVEDVANMAMFLLSDAASFVTGQVINVDG-GQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGSCCCCCHHHHHHHHCTTG
T ss_pred CCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCC-ChhcccCCcchhccccccCCcc
Confidence 2456799999999998886532 378999985 67777 8889999999998763
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=3.2e-07 Score=68.52 Aligned_cols=140 Identities=11% Similarity=0.125 Sum_probs=91.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+. +.++..+++.+ ..++|.
T Consensus 60 ~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~i 138 (260)
T 1nff_A 60 LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINI 138 (260)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999999988886 7999999998532 1122 45666777777 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|..++.+.+. .|+.++.++||++.+.... . .. . . +. .....
T Consensus 139 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~--~-~-~~----~~~~~ 204 (260)
T 1nff_A 139 SSIEGLAGT----VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VP--E-D-IF----QTALG 204 (260)
T ss_dssp CCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SC--T-T-CS----CCSSS
T ss_pred eehhhcCCC----CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-ch--h-h-HH----hCccC
Confidence 443221111 2345677899988877653 5899999999998876432 1 10 1 0 00 01112
Q ss_pred eecchhhHHHHHHHHhcCccc--CCceeEeecCCCc
Q 038413 123 VFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNI 156 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~ 156 (191)
.+.+.+|+|++++.++.++.. .++.+.+.| +..
T Consensus 205 ~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~g-G~~ 239 (260)
T 1nff_A 205 RAAEPVEVSNLVVYLASDESSYSTGAEFVVDG-GTV 239 (260)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGG
T ss_pred CCCCHHHHHHHHHHHhCccccCCcCCEEEECC-Cee
Confidence 467899999999999876532 378889985 443
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.6e-08 Score=73.59 Aligned_cols=142 Identities=11% Similarity=0.138 Sum_probs=84.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHH----HHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLK----IVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~----li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..+ ++..+++.+ ..++|.
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~ 140 (247)
T 2hq1_A 62 GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINI 140 (247)
T ss_dssp SCTTSHHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58999999888876 7899999998532 122333 344444567 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|..++.+.+. .++.+++++||++..+...... .........+....
T Consensus 141 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~ 211 (247)
T 2hq1_A 141 TSIAGIIGN----AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP-----DKVKEMYLNNIPLK 211 (247)
T ss_dssp CC-------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-----HHHHHHHHTTSTTS
T ss_pred cChhhccCC----CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc-----hHHHHHHHhhCCCC
Confidence 442111111 2245677899988877653 4889999999988765322210 00000011111123
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+++.+|+|++++.++.++. ..++.+++.|
T Consensus 212 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 243 (247)
T 2hq1_A 212 RFGTPEEVANVVGFLASDDSNYITGQVINIDG 243 (247)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCHHHHHHHHHHHcCcccccccCcEEEeCC
Confidence 57899999999999887653 2478899974
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.76 E-value=3.1e-08 Score=73.80 Aligned_cols=147 Identities=9% Similarity=0.089 Sum_probs=92.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cc----cHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FL----DQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~----~~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|++||+++... +. ..+.++..+++.+ ..++|.
T Consensus 58 ~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~i 136 (255)
T 2q2v_A 58 ADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINI 136 (255)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999999988886 7999999998532 11 2455666777887 788774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC--CCCCCce---EEEe-c
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR--PFEPHDD---VVVY-G 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~--~~~~~~~---~~~~-~ 116 (191)
|+....... .+...|..+|..++.+.+. .|+.++.++||++..+....... ....... ...+ .
T Consensus 137 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
T 2q2v_A 137 ASVHGLVGS----TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLA 212 (255)
T ss_dssp CCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHT
T ss_pred cCchhccCC----CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHh
Confidence 442211111 2245677899888877653 47899999999988754321110 0000000 0001 1
Q ss_pred CCcceeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
.......+++.+|+|++++.++.++.. .++.+.+.|
T Consensus 213 ~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg 250 (255)
T 2q2v_A 213 EKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDG 250 (255)
T ss_dssp TTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred ccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECC
Confidence 122223578999999999998876532 378888875
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.4e-07 Score=70.52 Aligned_cols=145 Identities=9% Similarity=0.020 Sum_probs=90.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 75 ~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~i 153 (260)
T 3un1_A 75 GDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSI 153 (260)
T ss_dssp SCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999999888876 7899999998642 23345555555 5667 677763
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+........ ..+...|..+|..++.+.+. .|+....++||+......+... ...........
T Consensus 154 sS~~~~~~~~--~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--------~~~~~~~~p~~ 223 (260)
T 3un1_A 154 TTSLVDQPMV--GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET--------HSTLAGLHPVG 223 (260)
T ss_dssp CCTTTTSCBT--TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG--------HHHHHTTSTTS
T ss_pred echhhccCCC--CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH--------HHHHhccCCCC
Confidence 3322111111 12345677889988877653 3788999999988765322110 00011111223
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeecCCCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNII 157 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~ 157 (191)
.+.+++|+|++++.+...+..-++.+++.| +..+
T Consensus 224 r~~~~~dva~av~~L~~~~~itG~~i~vdG-G~~~ 257 (260)
T 3un1_A 224 RMGEIRDVVDAVLYLEHAGFITGEILHVDG-GQNA 257 (260)
T ss_dssp SCBCHHHHHHHHHHHHHCTTCCSCEEEEST-TGGG
T ss_pred CCcCHHHHHHHHHHhcccCCCCCcEEEECC-Ceec
Confidence 467899999999988444434478899985 5544
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.3e-08 Score=73.79 Aligned_cols=141 Identities=13% Similarity=0.140 Sum_probs=89.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... +.+ .+.++.++++.+ ..|+|.
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ 137 (245)
T 2ph3_A 59 ANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNI 137 (245)
T ss_dssp CCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999998888754 7899999998532 122 455667777788 888774
Q ss_pred CCc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+. +... . .+...|..+|..++.+.+. .|+.+++++||++.++....... .... . +. .....
T Consensus 138 sS~~~~~~-~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~-~--~~-~~~~~ 207 (245)
T 2ph3_A 138 TSVVGILG-N----PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQ-EVKE-A--YL-KQIPA 207 (245)
T ss_dssp CCTHHHHC-C----SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-HHHH-H--HH-HTCTT
T ss_pred eChhhccC-C----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCH-HHHH-H--HH-hcCCC
Confidence 442 2211 0 2245677889888776543 48999999999987654322100 0000 0 00 01111
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+++.+|+|++++.++.++. ..++.+.+.+
T Consensus 208 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 240 (245)
T 2ph3_A 208 GRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDG 240 (245)
T ss_dssp CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence 347899999999999988753 2378888874
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.9e-08 Score=74.33 Aligned_cols=141 Identities=11% Similarity=0.109 Sum_probs=89.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... +.+. +.++..+++.+ ..++|.
T Consensus 64 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~ 142 (248)
T 2pnf_A 64 MNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNI 142 (248)
T ss_dssp CCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58999999988886 7999999998532 1223 44455666677 788774
Q ss_pred CCc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+. +... . .+...|..+|...+.+.+. .++.+++++||++.++....... ............
T Consensus 143 sS~~~~~~-~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~-----~~~~~~~~~~~~ 212 (248)
T 2pnf_A 143 SSVVGFTG-N----VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSE-----EIKQKYKEQIPL 212 (248)
T ss_dssp CCHHHHHC-C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH-----HHHHHHHHTCTT
T ss_pred ccHHhcCC-C----CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccH-----HHHHHHHhcCCC
Confidence 442 2211 1 2245677889888776553 48999999999887754322100 000000001111
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+++.+|+|++++.++.++. ..++.+++.|
T Consensus 213 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 245 (248)
T 2pnf_A 213 GRFGSPEEVANVVLFLCSELASYITGEVIHVNG 245 (248)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCccCHHHHHHHHHHHhCchhhcCCCcEEEeCC
Confidence 347899999999999987642 2378888874
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.73 E-value=8.2e-08 Score=71.06 Aligned_cols=144 Identities=9% Similarity=0.090 Sum_probs=89.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC----------------------cccH----HHHHHHHHHcCCccEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ----------------------FLDQ----LKIVHAIKVAGNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~----------------------~~~~----~~li~aa~~~g~vkr~ 47 (191)
+|+.|.+++.++++ +.|+|||+++... +.+. +.++..+++.+ ..++
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~i 137 (250)
T 2cfc_A 59 ADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVI 137 (250)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEE
Confidence 58999999988876 7899999997521 1111 34556666777 7887
Q ss_pred Ec-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 LP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|. |+...... ..+...|..+|..++.+.+. .|+.+++++||++.++........ ...........
T Consensus 138 v~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~ 210 (250)
T 2cfc_A 138 VNIASVASLVA----FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ---PELRDQVLARI 210 (250)
T ss_dssp EEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS---HHHHHHHHTTC
T ss_pred EEECChhhccC----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC---HHHHHHHHhcC
Confidence 74 44322111 12345677899988877653 389999999999877543221100 00000000111
Q ss_pred ceeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
....+.+.+|+|++++.++.++.. .++.+.+.|
T Consensus 211 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 245 (250)
T 2cfc_A 211 PQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDG 245 (250)
T ss_dssp TTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred CCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECC
Confidence 112467899999999999987542 378888874
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.73 E-value=8.5e-08 Score=71.54 Aligned_cols=151 Identities=15% Similarity=0.075 Sum_probs=87.4
Q ss_pred CCCCCHHHHHHhhccC--------cEEEEccCCCC-------------------cccHHHHHHHHHHc----CCccEEEc
Q 038413 1 GELDEHEKIVSILKEV--------DVVISTVAYPQ-------------------FLDQLKIVHAIKVA----GNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~--------d~V~~~~~~~~-------------------~~~~~~li~aa~~~----g~vkr~v~ 49 (191)
+|+.|.+++.++++++ |+|||+++... +.+..++++++.+. +...++|.
T Consensus 70 ~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~ 149 (264)
T 2pd6_A 70 ADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIIN 149 (264)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 5899999998888754 99999998532 23345666665543 21246663
Q ss_pred -CCc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+. +... ..+...|..+|..++.+.+. .|+.++++|||++.+........ ........+..
T Consensus 150 isS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~~~~~~~~~~~ 219 (264)
T 2pd6_A 150 ISSIVGKVG-----NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ-----KVVDKITEMIP 219 (264)
T ss_dssp ECCTHHHHC-----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---------------CTGGGCT
T ss_pred ECChhhccC-----CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH-----HHHHHHHHhCC
Confidence 442 2211 12345677899888776543 58999999999887654222110 00000000111
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHH
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLEL 162 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~ 162 (191)
...+.+.+|+|++++.++.++. ..++.+.+.| +..++....
T Consensus 220 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-g~~~~~~~~ 262 (264)
T 2pd6_A 220 MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTG-GLFMAENLY 262 (264)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TC-------
T ss_pred CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC-CceeccccC
Confidence 1246789999999999987643 3478888985 666665544
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=3.3e-08 Score=73.86 Aligned_cols=149 Identities=14% Similarity=0.123 Sum_probs=91.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHH----HHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHA----IKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~a----a~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ ++|++||+++... +.+..+++++ +++.+ ..++|.
T Consensus 70 ~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~ 148 (260)
T 2zat_A 70 CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLI 148 (260)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEE
Confidence 58899988887765 7899999998521 1223334444 45677 778774
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++..+....... ..............
T Consensus 149 isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~ 221 (260)
T 2zat_A 149 VSSVGAYHP----FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM---DKARKEYMKESLRI 221 (260)
T ss_dssp ECCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS---SHHHHHHHHHHHTC
T ss_pred EechhhcCC----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc---ChHHHHHHHhcCCC
Confidence 44322111 12345677899988877653 48999999999887653221110 00000001111112
Q ss_pred eeecchhhHHHHHHHHhcCccc--CCceeEeecCCCccC
Q 038413 122 AVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNIIS 158 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~t 158 (191)
..+.+.+|+|++++.++.++.. .++.+.+.| +...|
T Consensus 222 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg-G~~~s 259 (260)
T 2zat_A 222 RRLGNPEDCAGIVSFLCSEDASYITGETVVVGG-GTASR 259 (260)
T ss_dssp SSCBCGGGGHHHHHHHTSGGGTTCCSCEEEEST-TCCCC
T ss_pred CCCCCHHHHHHHHHHHcCcccCCccCCEEEECC-Ccccc
Confidence 3478999999999998876532 478899985 66554
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=6.2e-08 Score=71.90 Aligned_cols=146 Identities=8% Similarity=0.061 Sum_probs=89.7
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|+|||+++... +.+ .+.++..+++.+ ..++|. |
T Consensus 65 ~D~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~is 143 (254)
T 2wsb_A 65 ADVTDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLG 143 (254)
T ss_dssp CCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred EecCCHHHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEe
Confidence 58999999888773 6899999998532 112 344555666777 788774 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+........ ..|...|..+|..++.+.+. .|+.++++|||++.++........ ......+........
T Consensus 144 S~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~ 218 (254)
T 2wsb_A 144 SMSGTIVNR--PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER---PELFETWLDMTPMGR 218 (254)
T ss_dssp CGGGTSCCS--SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTC---HHHHHHHHHTSTTSS
T ss_pred cchhccCCC--CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccC---hHHHHHHHhcCCCCC
Confidence 422211111 12335788899988877653 489999999999887543221100 000000000011134
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+++.+|+|++++.++.++. ..++.+.+.|
T Consensus 219 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 249 (254)
T 2wsb_A 219 CGEPSEIAAAALFLASPAASYVTGAILAVDG 249 (254)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence 7899999999999987643 2378888874
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.70 E-value=1e-07 Score=71.04 Aligned_cols=153 Identities=12% Similarity=0.094 Sum_probs=92.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 56 ~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~i 134 (256)
T 2d1y_A 56 VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNV 134 (256)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEE
T ss_pred eeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58999988887765 6799999998532 12334444444 4566 678774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCC-CCceEEEecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 121 (191)
|+....... .+...|..+|..++.+.+. .|+.++.++||++............. .......+......
T Consensus 135 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (256)
T 2d1y_A 135 ASVQGLFAE----QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL 210 (256)
T ss_dssp CCGGGTSBC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT
T ss_pred ccccccCCC----CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCC
Confidence 443211111 2345677899988877653 48899999999887654322100000 00000011122222
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCH
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQ 159 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~ 159 (191)
..+++.+|+|++++.++.++. ..++.+.+.| +..+++
T Consensus 211 ~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~g-G~~~~~ 249 (256)
T 2d1y_A 211 RRLGKPEEVAEAVLFLASEKASFITGAILPVDG-GMTASF 249 (256)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGBC
T ss_pred CCCcCHHHHHHHHHHHhCchhcCCCCCEEEECC-Cccccc
Confidence 357899999999999988753 2478889985 665554
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=3.4e-07 Score=68.42 Aligned_cols=152 Identities=7% Similarity=0.044 Sum_probs=91.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHH----HHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKI----VHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~l----i~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|+|||+++... +.+..++ +..+++.+ ..++|.
T Consensus 64 ~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~i 142 (263)
T 3ai3_A 64 VDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHN 142 (263)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999999888876 7899999998532 1223334 44445667 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC---CCCC--Cce-EEEec
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR---PFEP--HDD-VVVYG 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~---~~~~--~~~-~~~~~ 116 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++.++....... .... ... .....
T Consensus 143 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (263)
T 3ai3_A 143 ASICAVQP----LWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVA 218 (263)
T ss_dssp CCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHH
T ss_pred CchhhcCC----CCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHH
Confidence 44222111 12345677899888877653 58999999999988764322100 0000 000 00000
Q ss_pred CC-cceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccC
Q 038413 117 NG-EAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIIS 158 (191)
Q Consensus 117 ~g-~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t 158 (191)
.. .....+++.+|+|++++.++.++. ..++.+.+.| +..+|
T Consensus 219 ~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdg-G~~~s 262 (263)
T 3ai3_A 219 DEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDG-GMLKT 262 (263)
T ss_dssp HHHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST-TCCCC
T ss_pred hcCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECC-Ccccc
Confidence 00 111357899999999999988653 2378889985 55554
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.69 E-value=6.9e-08 Score=71.21 Aligned_cols=148 Identities=12% Similarity=0.120 Sum_probs=90.7
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~-s~~g 53 (191)
+|+.|.+++.++++ ..|+|||+++... +.+..++++++.+ .+...++|. |+..
T Consensus 59 ~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~ 138 (244)
T 1cyd_A 59 VDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMV 138 (244)
T ss_dssp CCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred ecCCCHHHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchh
Confidence 58999999999886 4799999998532 2334555555543 331256663 4432
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
.... ..+...|..+|...+.+++. .++.+++++||.+.+......... .........+.....+++
T Consensus 139 ~~~~----~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 211 (244)
T 1cyd_A 139 AHVT----FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD---PEFARKLKERHPLRKFAE 211 (244)
T ss_dssp GTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC---HHHHHHHHHHSTTSSCBC
T ss_pred hcCC----CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC---HHHHHHHHhcCCccCCCC
Confidence 2111 12345677899988887653 478999999999887543211100 000000001112257899
Q ss_pred hhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 127 EEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
++|+|++++.++.++. ..++.+.+.+ +..
T Consensus 212 ~~dva~~~~~l~~~~~~~~~G~~~~v~g-G~~ 242 (244)
T 1cyd_A 212 VEDVVNSILFLLSDRSASTSGGGILVDA-GYL 242 (244)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSSEEEEST-TGG
T ss_pred HHHHHHHHHHHhCchhhcccCCEEEECC-Ccc
Confidence 9999999999998753 2367888874 443
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.69 E-value=4.8e-08 Score=73.24 Aligned_cols=146 Identities=13% Similarity=0.163 Sum_probs=91.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc---CCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA---GNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~---g~vkr~v~-s 50 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..++++++.+. + .++|. |
T Consensus 78 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~s 155 (274)
T 1ja9_A 78 ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTS 155 (274)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEEC
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CEEEEEc
Confidence 58999999988886 7899999998532 23456677777654 3 36653 4
Q ss_pred CcccC-CCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc---CC----CCC-CceEEE
Q 038413 51 EFGCE-EDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL---RP----FEP-HDDVVV 114 (191)
Q Consensus 51 ~~g~~-~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~---~~----~~~-~~~~~~ 114 (191)
+.... .. ..+...|..+|..++.+++. .++.+++++||.+.+....... .+ ... ......
T Consensus 156 S~~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (274)
T 1ja9_A 156 SIAAVMTG----IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEG 231 (274)
T ss_dssp CGGGTCCS----CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHH
T ss_pred ChHhccCC----CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHH
Confidence 43221 11 12345677899998877653 4899999999998775433110 00 000 000011
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
+..+.....+++++|+|++++.++.++.. .++.+++.|
T Consensus 232 ~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~g 271 (274)
T 1ja9_A 232 LANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTG 271 (274)
T ss_dssp HHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecC
Confidence 11222234688999999999999987532 478888874
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.68 E-value=3e-07 Score=68.63 Aligned_cols=147 Identities=9% Similarity=0.045 Sum_probs=88.3
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~-s 50 (191)
+|++|.+++.++++ |+|+|||+++... +.+ .+.++..+++.+ ..++|. |
T Consensus 65 ~D~~~~~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~is 143 (260)
T 2z1n_A 65 GDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIG 143 (260)
T ss_dssp CCTTCHHHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEC
Confidence 58999999988886 7999999998532 111 255666777777 788774 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC-----CCCCce-EEEecC
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP-----FEPHDD-VVVYGN 117 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~-----~~~~~~-~~~~~~ 117 (191)
+...... ..+...|..+|..++.+.+. .|+.++.++||++..+........ ...... ...+..
T Consensus 144 S~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
T 2z1n_A 144 SVTLLRP----WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMAS 219 (260)
T ss_dssp CGGGTSC----CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------
T ss_pred chhhcCC----CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHh
Confidence 4222111 12345677888888776543 489999999998876543210000 000000 011111
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
......+.+.+|+|++++.++.++. .-++.+.+.|
T Consensus 220 ~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdG 256 (260)
T 2z1n_A 220 RIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDG 256 (260)
T ss_dssp CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred cCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 1111236789999999999988643 2378888874
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.67 E-value=8e-08 Score=71.76 Aligned_cols=153 Identities=10% Similarity=0.079 Sum_probs=92.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc----CCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA----GNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~----g~vkr~v-~ 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++... +.-.++| .
T Consensus 61 ~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i 140 (259)
T 4e6p_A 61 MDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINM 140 (259)
T ss_dssp CCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred eeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 58999999888876 7899999998632 23345566655432 2012555 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc------CCCCCCceEEEec
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL------RPFEPHDDVVVYG 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~------~~~~~~~~~~~~~ 116 (191)
|+...... ..+...|..+|..++.+.+. .|+....++||+..+....... ............+
T Consensus 141 sS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (259)
T 4e6p_A 141 ASQAGRRG----EALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVG 216 (259)
T ss_dssp CCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred CChhhccC----CCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHh
Confidence 44221111 12345677899988877653 4889999999998765322210 0000111111122
Q ss_pred CCcceeeecchhhHHHHHHHHhcCccc--CCceeEeecCCCccC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNIIS 158 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~t 158 (191)
.+.....+.+.+|+|++++.++.+... -++.+++.| +..+|
T Consensus 217 ~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdg-G~~~s 259 (259)
T 4e6p_A 217 EAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDG-GNWMS 259 (259)
T ss_dssp HHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEEST-TSSCC
T ss_pred ccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECc-ChhcC
Confidence 222234678999999999988876432 378999985 55543
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=2e-07 Score=68.72 Aligned_cols=148 Identities=12% Similarity=0.102 Sum_probs=90.2
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~-s~~g 53 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++.+ .+...++|. |+..
T Consensus 59 ~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 138 (244)
T 3d3w_A 59 VDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQC 138 (244)
T ss_dssp CCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred EeCCCHHHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchh
Confidence 58999999999886 5799999998532 1233444555443 331356663 4422
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
.... ..+...|..+|..++.+.+. .++.+++++||++.+......... . ..............+++
T Consensus 139 ~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~--~-~~~~~~~~~~~~~~~~~ 211 (244)
T 3d3w_A 139 SQRA----VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD--P-HKAKTMLNRIPLGKFAE 211 (244)
T ss_dssp GTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS--T-THHHHHHHTCTTCSCBC
T ss_pred hccC----CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC--h-HHHHHHHhhCCCCCCcC
Confidence 1111 12345688899999887653 478999999998876543221110 0 00000011111235789
Q ss_pred hhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 127 EEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
++|+|++++.++.++. ..++.+++.+ +..
T Consensus 212 ~~dva~~~~~l~~~~~~~~~G~~~~v~g-G~~ 242 (244)
T 3d3w_A 212 VEHVVNAILFLLSDRSGMTTGSTLPVEG-GFW 242 (244)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEEST-TGG
T ss_pred HHHHHHHHHHHcCccccCCCCCEEEECC-Ccc
Confidence 9999999999998653 2478888885 543
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.66 E-value=6.6e-08 Score=71.13 Aligned_cols=148 Identities=12% Similarity=0.097 Sum_probs=91.5
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcC---------
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAG--------- 42 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g--------- 42 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++.+.-
T Consensus 46 ~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~ 125 (242)
T 1uay_A 46 GDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEG 125 (242)
T ss_dssp CCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTS
T ss_pred CCCCCHHHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Confidence 58999999998887 7899999998531 223456667666431
Q ss_pred CccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEE
Q 038413 43 NIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV 114 (191)
Q Consensus 43 ~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~ 114 (191)
...++|. |+...... ..+...|..+|..++.+.+. .|+.+++++||++.+........ .....
T Consensus 126 ~~~~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~~~~~ 196 (242)
T 1uay_A 126 QRGVIVNTASVAAFEG----QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE-----KAKAS 196 (242)
T ss_dssp CSEEEEEECCTHHHHC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH-----HHHHH
T ss_pred CCeEEEEeCChhhccC----CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccch-----hHHHH
Confidence 0126663 43221111 12345677899888776543 48999999999988754322110 00000
Q ss_pred ecCCcce-eeecchhhHHHHHHHHhcCcccCCceeEeecCCCccC
Q 038413 115 YGNGEAK-AVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIIS 158 (191)
Q Consensus 115 ~~~g~~~-~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t 158 (191)
....... ..+++.+|+|++++.++.++...++.+.+.| +..++
T Consensus 197 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g-G~~~~ 240 (242)
T 1uay_A 197 LAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVVRLDG-ALRMA 240 (242)
T ss_dssp HHTTCCSSCSCCCHHHHHHHHHHHHHCTTCCSCEEEEST-TCCCC
T ss_pred HHhhCCCcccCCCHHHHHHHHHHHhcCCCCCCcEEEEcC-CeecC
Confidence 0000000 2467899999999999988544588899985 55543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=6e-08 Score=72.43 Aligned_cols=151 Identities=9% Similarity=0.071 Sum_probs=91.4
Q ss_pred CCCCCHHHHHHhh--------ccCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc
Q 038413 1 GELDEHEKIVSIL--------KEVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~--------~g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~ 49 (191)
+|+.|.+++.+++ .+.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 65 ~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~ 143 (260)
T 2ae2_A 65 CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVF 143 (260)
T ss_dssp CCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 5899999888877 46899999998532 22334555555 5666 778773
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++..+..............+.........
T Consensus 144 isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
T 2ae2_A 144 ISSVSGALA----VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL 219 (260)
T ss_dssp ECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT
T ss_pred EcchhhccC----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCC
Confidence 44321111 12345677899998877653 4789999999998775432211000000000000111111
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
..+++.+|+|++++.++.++. ..++.+.+.| +..+
T Consensus 220 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg-G~~~ 256 (260)
T 2ae2_A 220 RRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG-GLMA 256 (260)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred CCCCCHHHHHHHHHHHcCccccCCCCCEEEECC-Cccc
Confidence 347899999999999887643 2378888885 5444
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=8.9e-07 Score=65.85 Aligned_cols=142 Identities=14% Similarity=0.074 Sum_probs=90.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+ .+.++..+++.+ ..++|.
T Consensus 58 ~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~i 136 (254)
T 1hdc_A 58 LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNI 136 (254)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 58999999888876 7999999998532 111 246777787777 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++..+....... ...... . ......
T Consensus 137 sS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~---~-~~~p~~ 207 (254)
T 1hdc_A 137 SSAAGLMG----LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI-RQGEGN---Y-PNTPMG 207 (254)
T ss_dssp CCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC-CCSTTS---C-TTSTTS
T ss_pred CchhhccC----CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccch-hHHHHH---H-hcCCCC
Confidence 44321111 12345677899888877543 48899999999988764332111 000000 0 000011
Q ss_pred eec-chhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFN-YEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i-~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+. +.+|+|++++.++.++. ..++.+.+.|
T Consensus 208 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg 240 (254)
T 1hdc_A 208 RVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDG 240 (254)
T ss_dssp SCB-CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCHHHHHHHHHHHhCchhcCCCCCEEEECC
Confidence 356 89999999999987653 2378888875
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.64 E-value=9.2e-07 Score=65.13 Aligned_cols=137 Identities=12% Similarity=0.165 Sum_probs=87.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..++++++ ++.+ ..++|.
T Consensus 65 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~i 143 (244)
T 2bd0_A 65 ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFI 143 (244)
T ss_dssp CCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEE
Confidence 58999999888875 6899999998532 23344555554 4456 678774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+.+ ..|+.+++++||++.+...... .. .. +.
T Consensus 144 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~-------~~--~~ 205 (244)
T 2bd0_A 144 TSVAATKA----FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-----DD-------EM--QA 205 (244)
T ss_dssp CCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-----CS-------TT--GG
T ss_pred ecchhcCC----CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc-----cc-------cc--cc
Confidence 44222111 1234567789998887653 2589999999998876532211 00 00 23
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
.+++.+|+|++++.++.++. . .++.+...+ ++.+
T Consensus 206 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~-~~~~ 241 (244)
T 2bd0_A 206 LMMMPEDIAAPVVQAYLQPSRTVVEEIILRPT-SGDI 241 (244)
T ss_dssp GSBCHHHHHHHHHHHHTSCTTEEEEEEEEEET-TCCC
T ss_pred cCCCHHHHHHHHHHHHhCCccccchheEEecc-cccc
Confidence 67899999999999998754 2 245555543 4443
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.7e-07 Score=69.76 Aligned_cols=144 Identities=13% Similarity=0.115 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHH----HcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIK----VAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~----~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++. +.+ ..++|.
T Consensus 69 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~ 147 (260)
T 3awd_A 69 MDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVA 147 (260)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEE
Confidence 58999999888875 6899999998432 123345555554 456 667663
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccc-cccCCCCCCceEEEecCCc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVN-VLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~-~~~~~~~~~~~~~~~~~g~ 119 (191)
|+ .+... .. ..|...|..+|..++.+++. .|+.++++|||++.+.... ..... .....+..+.
T Consensus 148 ~sS~~~~~~-~~--~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~ 220 (260)
T 3awd_A 148 IGSMSGLIV-NR--PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKP----ELYDAWIAGT 220 (260)
T ss_dssp ECCGGGTSC-CS--SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCH----HHHHHHHHTC
T ss_pred Eecchhccc-CC--CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCCh----HHHHHHHhcC
Confidence 43 33221 11 12235688899988877653 5899999999998875433 11100 0000000011
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
....+++.+|+|++++.++.++. ..++.+++.|
T Consensus 221 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 255 (260)
T 3awd_A 221 PMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDA 255 (260)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECC
Confidence 11347899999999999987643 2477888874
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=1.4e-07 Score=69.89 Aligned_cols=141 Identities=13% Similarity=0.140 Sum_probs=89.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 61 ~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~i 139 (246)
T 3osu_A 61 ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINL 139 (246)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 58999999888876 7899999998642 23455666666 5566 567663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|| .+... ..+...|..+|..++.+.+. .|+....++||+.......... .........+...
T Consensus 140 sS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~ 209 (246)
T 3osu_A 140 SSVVGAVG-----NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS-----DELKEQMLTQIPL 209 (246)
T ss_dssp CCHHHHHC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC-----HHHHHHHHTTCTT
T ss_pred cchhhcCC-----CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC-----HHHHHHHHhcCCC
Confidence 44 22211 12345677899888777552 5889999999988765322210 0000001111112
Q ss_pred eeecchhhHHHHHHHHhcCcccC--CceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPRTC--NRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~~--~~~~~i~~ 152 (191)
..+.+.+|+|++++.++.++..+ ++.+++.|
T Consensus 210 ~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdg 242 (246)
T 3osu_A 210 ARFGQDTDIANTVAFLASDKAKYITGQTIHVNG 242 (246)
T ss_dssp CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 34667899999999988865433 78888875
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=98.63 E-value=1.2e-07 Score=69.94 Aligned_cols=142 Identities=11% Similarity=0.047 Sum_probs=86.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..++++++. +.+ ..++|.
T Consensus 58 ~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ 136 (244)
T 1edo_A 58 GDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINI 136 (244)
T ss_dssp CCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999999988876 6899999998532 223445555554 356 678774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|...+.+.+. .|+.+++++||++.+........ .... . ........
T Consensus 137 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~-~---~~~~~~~~ 207 (244)
T 1edo_A 137 ASVVGLIGN----IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE-DMEK-K---ILGTIPLG 207 (244)
T ss_dssp CCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH-HHHH-H---HHTSCTTC
T ss_pred CChhhcCCC----CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh-HHHH-H---HhhcCCCC
Confidence 442111111 2245677889887766543 58999999999987654322110 0000 0 00011112
Q ss_pred eecchhhHHHHHHHHhcCcc---cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR---TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~---~~~~~~~i~~ 152 (191)
.+++.+|+|++++.++..+. ..++.+++.|
T Consensus 208 ~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~g 240 (244)
T 1edo_A 208 RTGQPENVAGLVEFLALSPAASYITGQAFTIDG 240 (244)
T ss_dssp SCBCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred CCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCC
Confidence 46789999999999885442 2378888874
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.63 E-value=8.5e-08 Score=73.94 Aligned_cols=159 Identities=8% Similarity=0.082 Sum_probs=98.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCc----------
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNI---------- 44 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~v---------- 44 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++...- .
T Consensus 93 ~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~~~~~~~~~ 171 (322)
T 3qlj_A 93 SNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYW-RGLSKAGKAVD 171 (322)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTCCCC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH-HHccccCCCCC
Confidence 58999999888775 6899999998642 123344555553321 1
Q ss_pred cEEEc-CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEe
Q 038413 45 KRFLP-SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY 115 (191)
Q Consensus 45 kr~v~-s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~ 115 (191)
.++|. || .+... . .....|..+|..++.+.+. .|+....++|| +.......... . ..
T Consensus 172 g~IV~isS~~~~~~-~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~----~-~~--- 237 (322)
T 3qlj_A 172 GRIINTSSGAGLQG-S----VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFA----E-MM--- 237 (322)
T ss_dssp EEEEEECCHHHHHC-B----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCC----C------
T ss_pred cEEEEEcCHHHccC-C----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhh----h-hh---
Confidence 26653 44 22211 0 1244677899988877653 57889999999 43322211110 0 00
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc-----------------CHHHHHHHHHHHhCCceE
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII-----------------SQLELISLWEQKTGRSFK 175 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~-----------------t~~e~~~~~~~~~g~~~~ 175 (191)
......+.+.+.+|+|++++.++.+.. --|+.+.+.| +... +..|+++.+.+.+|.+.+
T Consensus 238 ~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdG-G~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~ 315 (322)
T 3qlj_A 238 ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEG-GKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP 315 (322)
T ss_dssp ------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEET-TEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred hccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECC-CccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence 011222456789999999999887643 2378888885 5544 779999999999986543
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.63 E-value=2.3e-07 Score=69.29 Aligned_cols=147 Identities=11% Similarity=0.090 Sum_probs=90.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCC--CC-------------------cccHHHHHHHH----HHcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAY--PQ-------------------FLDQLKIVHAI----KVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~--~~-------------------~~~~~~li~aa----~~~g~vkr~v 48 (191)
+|++|.+++.++++ +.|+|||+++. .. +.+..++++++ ++.+ ..++|
T Consensus 64 ~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv 142 (264)
T 3i4f_A 64 ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRII 142 (264)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEE
Confidence 58999999888876 78999999993 11 23345566655 6666 67776
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
. |+.+...... ..+...|..+|..++.+.+. .|+..+.++||++............ . ........
T Consensus 143 ~iss~~~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~----~~~~~~~p 215 (264)
T 3i4f_A 143 NYGFQGADSAPG--WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEA-R----QLKEHNTP 215 (264)
T ss_dssp EECCTTGGGCCC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHH-H----HC------
T ss_pred EEeechhcccCC--CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHH-H----HHHhhcCC
Confidence 4 4332211111 12345677899888776542 5889999999988775433211000 0 00001111
Q ss_pred eeeecchhhHHHHHHHHhcCccc--CCceeEeecCCCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNI 156 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~ 156 (191)
...+.+.+|+|+++..++.++.. -++.+.+.| +-.
T Consensus 216 ~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdG-G~~ 252 (264)
T 3i4f_A 216 IGRSGTGEDIARTISFLCEDDSDMITGTIIEVTG-AVD 252 (264)
T ss_dssp --CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESC-SCC
T ss_pred CCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcC-cee
Confidence 12457899999999999987542 378899985 443
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.61 E-value=9.1e-07 Score=64.78 Aligned_cols=130 Identities=14% Similarity=0.109 Sum_probs=78.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+ .+.++.++++.+ ..++|.
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~i 135 (234)
T 2ehd_A 57 GDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNV 135 (234)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEE
Confidence 58999988887765 6799999998532 111 246677777777 788774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+.+ ..|+.++.++||++........ .. . .
T Consensus 136 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~---------~--~ 195 (234)
T 2ehd_A 136 GSLAGKNP----FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-----PG---------Q--A 195 (234)
T ss_dssp CCTTTTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------------
T ss_pred CCchhcCC----CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-----cc---------c--c
Confidence 44322111 1234567788987776654 2589999999998765421110 00 0 1
Q ss_pred eecchhhHHHHHHHHhcCcc-cCCceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPR-TCNRIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~~~~~~~i~ 151 (191)
.+++.+|+|++++.++.++. .....+.+.
T Consensus 196 ~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~ 225 (234)
T 2ehd_A 196 WKLKPEDVAQAVLFALEMPGHAMVSEIELR 225 (234)
T ss_dssp --CCHHHHHHHHHHHHHSCCSSCCCEEECC
T ss_pred CCCCHHHHHHHHHHHhCCCcccccceEEEe
Confidence 25789999999999998764 334444443
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.60 E-value=2.3e-07 Score=68.66 Aligned_cols=141 Identities=13% Similarity=0.157 Sum_probs=87.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|++||+++... +.+ .+.++..+++.+ ..++|.
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~i 139 (246)
T 2uvd_A 61 ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNI 139 (246)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999999888876 6899999998542 112 344556666677 778774
Q ss_pred CCc-ccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
||. +... . .+...|..+|..++.+.+ ..|+.++.++||++..+...... . ............
T Consensus 140 sS~~~~~~-~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~-~~~~~~~~~~p~ 209 (246)
T 2uvd_A 140 ASVVGVTG-N----PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD----E-NIKAEMLKLIPA 209 (246)
T ss_dssp CCTHHHHC-C----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC----T-THHHHHHHTCTT
T ss_pred CCHHhcCC-C----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC----H-HHHHHHHhcCCC
Confidence 442 2211 0 124567788988776644 25899999999988765322110 0 000000000011
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+++.+|+|++++.++.++. . .++.+.+.|
T Consensus 210 ~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg 242 (246)
T 2uvd_A 210 AQFGEAQDIANAVTFFASDQSKYITGQTLNVDG 242 (246)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHcCchhcCCCCCEEEECc
Confidence 247899999999999987643 2 378888874
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.3e-06 Score=65.97 Aligned_cols=146 Identities=12% Similarity=0.145 Sum_probs=87.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 83 ~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~i 161 (281)
T 3v2h_A 83 ADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINI 161 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 58999999888775 6899999998642 23344555554 5566 567663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC-----CC-CCce-EEE
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP-----FE-PHDD-VVV 114 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~-----~~-~~~~-~~~ 114 (191)
|+ .+.. .. .....|..+|..++.+.+. .|+....++||++........... .. .... ...
T Consensus 162 sS~~~~~-~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (281)
T 3v2h_A 162 ASAHGLV-AS----PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEV 236 (281)
T ss_dssp CCGGGTS-CC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------------------------
T ss_pred CCccccc-CC----CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHH
Confidence 44 2221 11 2245677899988877653 478999999998876543221110 00 0000 111
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+..+.....+++.+|+|++++.++.++. --|+.+.+.|
T Consensus 237 ~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdG 276 (281)
T 3v2h_A 237 MLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDG 276 (281)
T ss_dssp ---CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEEST
T ss_pred HHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECC
Confidence 2233334568899999999999988753 2378888875
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.58 E-value=2.8e-07 Score=69.05 Aligned_cols=152 Identities=11% Similarity=0.116 Sum_probs=92.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCCc------------------------ccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQF------------------------LDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~~------------------------~~~~~li~aa~~~g~vkr~v~ 49 (191)
+|++|.+++.++++ +.|+|||+++.... ...+.++..+++.+ ..++|.
T Consensus 71 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~ 149 (267)
T 1iy8_A 71 ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVN 149 (267)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEE
Confidence 58999999888875 68999999985311 11245666777777 778773
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccc--c-CCCCCCceEEEecCC
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVL--L-RPFEPHDDVVVYGNG 118 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~--~-~~~~~~~~~~~~~~g 118 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++..+..... . ...........+...
T Consensus 150 isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (267)
T 1iy8_A 150 TASVGGIRG----IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV 225 (267)
T ss_dssp ECCGGGTSB----CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT
T ss_pred EcchhhccC----CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhcc
Confidence 44322111 12345677899888877652 589999999999877543221 0 100000000000011
Q ss_pred cceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccC
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIIS 158 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t 158 (191)
.....+.+.+|+|++++.++.++. .-++.+.+.| +..++
T Consensus 226 ~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdG-G~~~~ 266 (267)
T 1iy8_A 226 NPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG-GQSAA 266 (267)
T ss_dssp CTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST-TTTTB
T ss_pred CCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECC-CcccC
Confidence 111246789999999999987653 2378888885 55443
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.58 E-value=2.2e-08 Score=75.08 Aligned_cols=157 Identities=7% Similarity=0.004 Sum_probs=94.1
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-----------c----ccHHHHHHHHHHcC--CccEEEc-CCcccC
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-----------F----LDQLKIVHAIKVAG--NIKRFLP-SEFGCE 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-----------~----~~~~~li~aa~~~g--~vkr~v~-s~~g~~ 55 (191)
+|++|.+++.++++. .|+|||+++... + ...++++.++++.+ ...++|. |+....
T Consensus 65 ~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 144 (267)
T 2gdz_A 65 CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL 144 (267)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcccc
Confidence 589999998888764 699999998642 1 13455667776542 1356663 442211
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHH---------hcCCCeEEEecccccccccccccCCCCCCce--E-EEecCCcceee
Q 038413 56 EDRVRPLPPFEAYLEKKRIVRRAIE---------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDD--V-VVYGNGEAKAV 123 (191)
Q Consensus 56 ~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~--~-~~~~~g~~~~~ 123 (191)
... .+...|..+|..++.+.+ ..|+.++.++||++................. . ........+..
T Consensus 145 ~~~----~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (267)
T 2gdz_A 145 MPV----AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYG 220 (267)
T ss_dssp SCC----TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHC
T ss_pred CCC----CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhcccc
Confidence 111 123457788887776544 2589999999998876543221100000000 0 00000011134
Q ss_pred ecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHH
Q 038413 124 FNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLEL 162 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~ 162 (191)
+++.+|+|++++.++.++...++.+.+.+ ++.+|+.|+
T Consensus 221 ~~~~~dvA~~v~~l~s~~~~~G~~~~v~g-g~~~~~~~~ 258 (267)
T 2gdz_A 221 ILDPPLIANGLITLIEDDALNGAIMKITT-SKGIHFQDY 258 (267)
T ss_dssp CBCHHHHHHHHHHHHHCTTCSSCEEEEET-TTEEEECCC
T ss_pred CCCHHHHHHHHHHHhcCcCCCCcEEEecC-CCcccccCc
Confidence 68999999999999987655688999985 677766543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=3.4e-07 Score=68.30 Aligned_cols=147 Identities=10% Similarity=0.108 Sum_probs=88.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------------cccHHHHHHHHHHc-------
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------------FLDQLKIVHAIKVA------- 41 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------------~~~~~~li~aa~~~------- 41 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..++++++...
T Consensus 65 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~ 144 (265)
T 2o23_A 65 ADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPD 144 (265)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC
T ss_pred cCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccc
Confidence 58999999988886 7999999998531 12345566666543
Q ss_pred ---CCccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCc
Q 038413 42 ---GNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHD 110 (191)
Q Consensus 42 ---g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~ 110 (191)
+ ..++|. |+...... ..+...|..+|..++.+.+. .|+.++.++||++..+....... ....
T Consensus 145 ~~~~-~~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~- 217 (265)
T 2o23_A 145 QGGQ-RGVIINTASVAAFEG----QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE-KVCN- 217 (265)
T ss_dssp TTSC-CEEEEEECCTHHHHC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------C-
T ss_pred cCCC-CcEEEEeCChhhcCC----CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH-HHHH-
Confidence 5 567764 43221111 12345677889887766542 48999999999877653222100 0000
Q ss_pred eEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCcc
Q 038413 111 DVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNII 157 (191)
Q Consensus 111 ~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~ 157 (191)
. +...-.....+++.+|+|++++.++.++...++.+.+.| +..+
T Consensus 218 ~--~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdg-G~~~ 261 (265)
T 2o23_A 218 F--LASQVPFPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDG-AIRM 261 (265)
T ss_dssp H--HHHTCSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST-TCCC
T ss_pred H--HHHcCCCcCCCCCHHHHHHHHHHHhhcCccCceEEEECC-CEec
Confidence 0 000000012467899999999999876555578888885 5443
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1e-06 Score=65.75 Aligned_cols=147 Identities=11% Similarity=0.129 Sum_probs=84.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHH----HHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKI----VHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~l----i~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++ +..+++.+ ..++|.
T Consensus 62 ~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~i 140 (260)
T 1x1t_A 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINI 140 (260)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999999888775 6899999998532 1222334 44445566 678773
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCC------CceEEEe-
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEP------HDDVVVY- 115 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~------~~~~~~~- 115 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++..+........... .......
T Consensus 141 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (260)
T 1x1t_A 141 ASAHGLVA----SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL 216 (260)
T ss_dssp CCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CH
T ss_pred CcHHhCcC----CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHh
Confidence 44221111 12345677899988877653 478999999998876543221100000 0000001
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
........+.+.+|+|++++.++.++. ..++.+.+.|
T Consensus 217 ~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdg 255 (260)
T 1x1t_A 217 SEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG 255 (260)
T ss_dssp HHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence 100111347899999999999987643 2378888874
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.57 E-value=2.4e-07 Score=69.96 Aligned_cols=151 Identities=12% Similarity=0.151 Sum_probs=92.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..+++++ +++.+ ..++|.
T Consensus 78 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~i 156 (281)
T 3s55_A 78 VDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTV 156 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 58999998888775 7899999998642 2334555555 45555 567663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccc-----cCCCCCCceE----
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVL-----LRPFEPHDDV---- 112 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~-----~~~~~~~~~~---- 112 (191)
|| .+... ..+...|..+|..++.+.+. .|+....++||++........ ..........
T Consensus 157 sS~~~~~~-----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (281)
T 3s55_A 157 SSMLGHSA-----NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVE 231 (281)
T ss_dssp CCGGGGSC-----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHH
T ss_pred CChhhcCC-----CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHH
Confidence 44 23211 12345677899888877653 478999999999876543210 0000000000
Q ss_pred -EEecCCcceeeecchhhHHHHHHHHhcCcccC--CceeEeecCCCccC
Q 038413 113 -VVYGNGEAKAVFNYEEDIAKCTIKVINDPRTC--NRIVIYRPQTNIIS 158 (191)
Q Consensus 113 -~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--~~~~~i~~~~~~~t 158 (191)
.+...+..+..+.+.+|+|++++.++.++..+ ++.+.+.| +..++
T Consensus 232 ~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg-G~~~~ 279 (281)
T 3s55_A 232 SVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDA-GATAR 279 (281)
T ss_dssp HHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGG
T ss_pred HHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC-CcccC
Confidence 00011222356789999999999999875432 78899985 55543
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.54 E-value=5.9e-07 Score=67.36 Aligned_cols=151 Identities=17% Similarity=0.178 Sum_probs=91.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 73 ~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~i 151 (266)
T 3uxy_A 73 GDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNV 151 (266)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58888888776654 6899999998642 23345556655 6666 667763
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-CCCC-CceEEEecCCc
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-PFEP-HDDVVVYGNGE 119 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-~~~~-~~~~~~~~~g~ 119 (191)
|+ .+... ..+...|..+|..++.+.+. .|+..+.++||+........... .... ...........
T Consensus 152 sS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (266)
T 3uxy_A 152 ASCWGLRP-----GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV 226 (266)
T ss_dssp CCSBTTBC-----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS
T ss_pred CCHHhCCC-----CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC
Confidence 43 22211 12345677899988877653 48899999999887654322110 0000 00000111122
Q ss_pred ceeeecchhhHHHHHHHHhcCccc--CCceeEeecCCCccC
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNIIS 158 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~t 158 (191)
....+.+.+|+|++++.++.++.. -++.+.+.| +..+|
T Consensus 227 p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG-G~~~s 266 (266)
T 3uxy_A 227 PLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNG-GKAVA 266 (266)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TCCCC
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECc-CEeCC
Confidence 223567899999999999887542 378889985 55543
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.9e-06 Score=63.80 Aligned_cols=143 Identities=10% Similarity=0.073 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+. +.++..+++.+ ..++|.
T Consensus 61 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~i 139 (249)
T 2ew8_A 61 CDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINL 139 (249)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred eecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEE
Confidence 58999998887753 7899999998532 1222 33444477777 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccc-cccCCCCCCceEEEecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVN-VLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++..+... ..... . ........ ...
T Consensus 140 sS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~-~~~~~~~~--~~~ 211 (249)
T 2ew8_A 140 TSTTYWLK----IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA-M-FDVLPNML--QAI 211 (249)
T ss_dssp CCGGGGSC----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CTT--SSS
T ss_pred cchhhccC----CCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc-h-hhHHHHhh--Ccc
Confidence 44322111 12345677899988877653 4899999999998775432 11100 0 00000000 011
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+.+.+|+|++++.++.++. .-++.+.+.|
T Consensus 212 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdG 244 (249)
T 2ew8_A 212 PRLQVPLDLTGAAAFLASDDASFITGQTLAVDG 244 (249)
T ss_dssp CSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred CCCCCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence 236789999999999987643 2378888874
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=6.2e-07 Score=66.72 Aligned_cols=148 Identities=10% Similarity=0.084 Sum_probs=87.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..+++++ +++.+...++|.
T Consensus 64 ~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~i 143 (261)
T 1gee_A 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINM 143 (261)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 58999998888776 7899999998532 1223444444 444331246663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+.+. .++.+++++||++.++........ . .............
T Consensus 144 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~-~~~~~~~~~~~~~ 216 (261)
T 1gee_A 144 SSVHEKIP----WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD--P-EQRADVESMIPMG 216 (261)
T ss_dssp CCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS--H-HHHHHHHTTCTTS
T ss_pred CCHHhcCC----CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccC--h-hHHHHHHhcCCCC
Confidence 44322111 12355677899888766543 489999999999887643221100 0 0000000011112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
.+++.+|+|++++.++.++. ..++.+.+.| +..
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-g~~ 251 (261)
T 1gee_A 217 YIGEPEEIAAVAAWLASSEASYVTGITLFADG-GMT 251 (261)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGG
T ss_pred CCcCHHHHHHHHHHHhCccccCCCCcEEEEcC-Ccc
Confidence 46889999999999987642 2378888885 443
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=2.7e-07 Score=68.59 Aligned_cols=153 Identities=7% Similarity=0.036 Sum_probs=84.1
Q ss_pred CCCCCHHHHHHhhcc----CcEEEEccCCCC------------cccHHHHHHHHH----HcCCccEEEc-CCcccCC-CC
Q 038413 1 GELDEHEKIVSILKE----VDVVISTVAYPQ------------FLDQLKIVHAIK----VAGNIKRFLP-SEFGCEE-DR 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g----~d~V~~~~~~~~------------~~~~~~li~aa~----~~g~vkr~v~-s~~g~~~-~~ 58 (191)
+|+.|.+++.++++. .|+|||+++... +.+..++++++. +.+ ..|+|. |+..... ..
T Consensus 44 ~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~ 122 (257)
T 1fjh_A 44 TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAF 122 (257)
T ss_dssp SHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCG
T ss_pred cCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhcccc
Confidence 477888888888764 499999998643 234455555554 566 678773 4422110 00
Q ss_pred -C----------------------CCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCC
Q 038413 59 -V----------------------RPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEP 108 (191)
Q Consensus 59 -~----------------------~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~ 108 (191)
. ....+...|..+|..++.+.+. .|+.++.++||++..............
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~ 202 (257)
T 1fjh_A 123 DKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRY 202 (257)
T ss_dssp GGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------
T ss_pred ccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhH
Confidence 0 0001234567889988877653 589999999998876543221000000
Q ss_pred CceEEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 109 HDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 109 ~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
....... ......+.+.+|+|++++.++.++. ..++.+.+.| +..+
T Consensus 203 ~~~~~~~--~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdg-G~~~ 250 (257)
T 1fjh_A 203 GESIAKF--VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDG-GIDA 250 (257)
T ss_dssp ------C--CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEEST-THHH
T ss_pred HHHHHhc--ccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECC-Cccc
Confidence 0000000 0001236889999999999998753 2378888874 5433
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.52 E-value=3.6e-07 Score=68.84 Aligned_cols=135 Identities=19% Similarity=0.232 Sum_probs=83.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCc--cEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNI--KRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~v--kr~v 48 (191)
+|+.|.+++.++++ ++|+|||+++... +.+ +++++.++++.+ + .++|
T Consensus 90 ~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv 168 (279)
T 1xg5_A 90 CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHII 168 (279)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEE
T ss_pred ecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEE
Confidence 58999999888775 7899999998532 112 577888888887 6 6776
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHH---------hcCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE---------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
. |+....... ...+...|..+|..++.+.+ ..++.++.++||++.......... . .... .. ..
T Consensus 169 ~isS~~~~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~-~-~~~~--~~-~~ 241 (279)
T 1xg5_A 169 NINSMSGHRVL--PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD-K-DPEK--AA-AT 241 (279)
T ss_dssp EECCGGGTSCC--SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT-T-CHHH--HH-HH
T ss_pred EEcChhhcccC--CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcc-c-ChhH--Hh-hh
Confidence 4 443221101 11234467788888776543 357999999999887654211111 0 0000 00 00
Q ss_pred cceeeecchhhHHHHHHHHhcCccc
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPRT 143 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~~ 143 (191)
.....+++.+|+|++++.++.++..
T Consensus 242 ~~~~~~~~~~dvA~~i~~l~~~~~~ 266 (279)
T 1xg5_A 242 YEQMKCLKPEDVAEAVIYVLSTPAH 266 (279)
T ss_dssp HC---CBCHHHHHHHHHHHHHSCTT
T ss_pred cccccCCCHHHHHHHHHHHhcCCcc
Confidence 1123468999999999999988653
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.49 E-value=2.5e-06 Score=63.41 Aligned_cols=147 Identities=7% Similarity=0.058 Sum_probs=87.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHc---------
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVA--------- 41 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~--------- 41 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++...
T Consensus 60 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~ 139 (257)
T 3tpc_A 60 ADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDAD 139 (257)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTT
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCC
Confidence 58999999888876 7899999998541 22345556655542
Q ss_pred -CCccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceE
Q 038413 42 -GNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDV 112 (191)
Q Consensus 42 -g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~ 112 (191)
+ -.++|. |+...... ..+...|..+|..++.+.+. .|+....++||++.......... ...
T Consensus 140 ~~-~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-----~~~ 209 (257)
T 3tpc_A 140 GE-RGVIVNTASIAAFDG----QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ-----DVQ 209 (257)
T ss_dssp SC-CEEEEEECCTHHHHC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------
T ss_pred CC-CeEEEEEechhhccC----CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH-----HHH
Confidence 3 345653 43221111 12345677899888776542 58999999999887654322111 001
Q ss_pred EEecCCcce-eeecchhhHHHHHHHHhcCcccCCceeEeecCCCccC
Q 038413 113 VVYGNGEAK-AVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIIS 158 (191)
Q Consensus 113 ~~~~~g~~~-~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t 158 (191)
......... ..+.+.+|+|+++..++.++..-++.+.+.| +..++
T Consensus 210 ~~~~~~~p~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdG-G~~~~ 255 (257)
T 3tpc_A 210 DALAASVPFPPRLGRAEEYAALVKHICENTMLNGEVIRLDG-ALRMA 255 (257)
T ss_dssp ----CCSSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST-TCCC-
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHHHcccCCcCCcEEEECC-CccCC
Confidence 111111111 3467899999999999887444478899985 55544
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=2.2e-07 Score=68.94 Aligned_cols=143 Identities=13% Similarity=0.139 Sum_probs=86.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCC-CC-------------------cccHHHHHHHH----HH----cCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAY-PQ-------------------FLDQLKIVHAI----KV----AGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~-~~-------------------~~~~~~li~aa----~~----~g~vk 45 (191)
+|+.|.+++.++++ ++|+|||+++. .. +.+..++++++ ++ .+...
T Consensus 64 ~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (258)
T 3afn_B 64 ADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTS 143 (258)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCc
Confidence 58999999988887 79999999985 21 12233344433 22 21114
Q ss_pred EEEc-CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEec
Q 038413 46 RFLP-SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG 116 (191)
Q Consensus 46 r~v~-s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (191)
++|. |+ .+.... ..+...|..+|..++.+.+. .|+.+++++||++.+....... ........
T Consensus 144 ~iv~~sS~~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~ 214 (258)
T 3afn_B 144 AVISTGSIAGHTGG----GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT-----QDVRDRIS 214 (258)
T ss_dssp EEEEECCTHHHHCC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC-----HHHHHHHH
T ss_pred EEEEecchhhccCC----CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC-----HHHHHHHh
Confidence 6663 33 332101 12355788899988877653 4899999999998775432210 00000000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCccc---CCceeEeec
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRT---CNRIVIYRP 152 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~~i~~ 152 (191)
.+.....+++++|+|++++.++.++.. .++.+++.|
T Consensus 215 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~g 253 (258)
T 3afn_B 215 NGIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDING 253 (258)
T ss_dssp TTCTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEEST
T ss_pred ccCCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECC
Confidence 111123578999999999999876432 378888874
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.5e-06 Score=64.63 Aligned_cols=153 Identities=10% Similarity=0.099 Sum_probs=80.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHH----HHcC---CccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAI----KVAG---NIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa----~~~g---~vkr 46 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ...+
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~ 141 (261)
T 3n74_A 62 ADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECV 141 (261)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeE
Confidence 58999998888775 6799999998532 12233344443 3321 0123
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+| .|+...... ......|..+|..++.+.+. .++....++||+........+.... .......+...
T Consensus 142 iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~ 216 (261)
T 3n74_A 142 ILNVASTGAGRP----RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGED-SEEIRKKFRDS 216 (261)
T ss_dssp EEEECCTTTTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------
T ss_pred EEEeCchhhcCC----CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccC-cHHHHHHHhhc
Confidence 55 344222111 12234577899888877653 5788999999987765433221100 11111111122
Q ss_pred cceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCH
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQ 159 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~ 159 (191)
.....+++.+|+|+++..++.+.. .-++.+.+.| +..++.
T Consensus 217 ~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdg-G~~~~~ 258 (261)
T 3n74_A 217 IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDG-GRSIGG 258 (261)
T ss_dssp CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST-TTTC--
T ss_pred CCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecC-CcccCC
Confidence 222357899999999999887543 2378899985 666654
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.49 E-value=4.9e-07 Score=68.40 Aligned_cols=142 Identities=11% Similarity=0.130 Sum_probs=85.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|+|||+++... +.+. ..++..+++.+ ..++|.
T Consensus 100 ~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~i 178 (285)
T 2c07_A 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINI 178 (285)
T ss_dssp CCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEE
Confidence 58999999888874 6899999998542 1232 33444455667 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|..++.+.+. .|+.+++++||++.......... .... . ........
T Consensus 179 sS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~-~---~~~~~~~~ 249 (285)
T 2c07_A 179 SSIVGLTGN----VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE-QIKK-N---IISNIPAG 249 (285)
T ss_dssp CCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH-HHHH-H---HHTTCTTS
T ss_pred CChhhccCC----CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCH-HHHH-H---HHhhCCCC
Confidence 442211110 1245677889888776543 48999999999887653222100 0000 0 00000112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+++.+|+|++++.++.++. ..++.+.+.|
T Consensus 250 ~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~g 281 (285)
T 2c07_A 250 RMGTPEEVANLACFLSSDKSGYINGRVFVIDG 281 (285)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCC
Confidence 37899999999999988653 2478888874
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.48 E-value=3.8e-06 Score=62.74 Aligned_cols=142 Identities=11% Similarity=0.076 Sum_probs=84.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----c-CCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----A-GNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~-g~vkr~v~ 49 (191)
+|+.|.+++.++++ ..|+|||+++... +.+..++++++.. . + ..++|.
T Consensus 80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~ 158 (266)
T 3o38_A 80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH-GGVIVN 158 (266)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC-CEEEEE
T ss_pred eCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CeEEEE
Confidence 58999999888775 5799999998632 2234455555543 2 3 456663
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+... ..+...|..+|..++.+.+. .|+....++||+........... ............
T Consensus 159 ~sS~~~~~~-----~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~ 229 (266)
T 3o38_A 159 NASVLGWRA-----QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS----SELLDRLASDEA 229 (266)
T ss_dssp ECCGGGTCC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------CCT
T ss_pred eCCHHHcCC-----CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc----HHHHHHHHhcCC
Confidence 43 22211 12345677899888877652 58899999999877654322111 111111112222
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
...+.+.+|+|++++.++.++. .-++.+.+.|
T Consensus 230 ~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg 263 (266)
T 3o38_A 230 FGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSS 263 (266)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred cCCCCCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence 2356789999999999888643 2378888874
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.48 E-value=7.4e-07 Score=66.01 Aligned_cols=145 Identities=7% Similarity=0.025 Sum_probs=87.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..+++++ +++.+ ..++|.
T Consensus 60 ~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~i 138 (247)
T 1uzm_A 60 VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFI 138 (247)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEE
Confidence 58999998888775 5799999998632 1223344444 44566 678774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|..++.+.+. .|+.++.++||++..+....... .... . ........
T Consensus 139 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~-~---~~~~~p~~ 209 (247)
T 1uzm_A 139 GSVSGLWGI----GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE-RIQQ-G---ALQFIPAK 209 (247)
T ss_dssp CCCCC---------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH-HHHH-H---HGGGCTTC
T ss_pred CCHhhccCC----CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCH-HHHH-H---HHhcCCCC
Confidence 442211111 2245677889888776553 58999999999987654322100 0000 0 00000012
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
.+.+.+|+|++++.++.++. ..++.+.+.| +..
T Consensus 210 ~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdg-G~~ 244 (247)
T 1uzm_A 210 RVGTPAEVAGVVSFLASEDASYISGAVIPVDG-GMG 244 (247)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TTT
T ss_pred CCcCHHHHHHHHHHHcCccccCCcCCEEEECC-Ccc
Confidence 36789999999999987643 2478888885 543
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.48 E-value=6e-07 Score=67.04 Aligned_cols=151 Identities=9% Similarity=0.010 Sum_probs=89.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++. +.++..++|.
T Consensus 65 ~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~i 144 (263)
T 3ak4_A 65 VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNT 144 (263)
T ss_dssp CCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 58999999988876 7999999998532 122344555544 3331356663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc-----CCCCC-CceEEEec
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL-----RPFEP-HDDVVVYG 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~-----~~~~~-~~~~~~~~ 116 (191)
|+....... .+...|..+|..++.+.+. .|+.++.++||++..+...... ..... ......+.
T Consensus 145 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (263)
T 3ak4_A 145 ASLAAKVGA----PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYV 220 (263)
T ss_dssp CCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred cccccccCC----CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHH
Confidence 443221111 2345677899988877653 4899999999998775422110 00000 00000000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
.......+++.+|+|++++.++.++. ..++.+.+.| +..
T Consensus 221 ~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg-G~~ 261 (263)
T 3ak4_A 221 SLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTG-GVR 261 (263)
T ss_dssp HTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS-SSS
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECc-CEe
Confidence 11111347899999999999987653 2478888885 443
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.48 E-value=2.3e-06 Score=65.01 Aligned_cols=148 Identities=10% Similarity=0.065 Sum_probs=90.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHcCCcc--EEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAGNIK--RFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g~vk--r~v~-s 50 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++...- .+ ++|. |
T Consensus 107 ~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~~g~Iv~is 185 (294)
T 3r3s_A 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL-PKGASIITTS 185 (294)
T ss_dssp CCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-CTTCEEEEEC
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh-hcCCEEEEEC
Confidence 58999988877764 6899999998531 234567788877654 33 6663 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+...... ......|..+|..++.+.+. .|+....++||++........... ......+........
T Consensus 186 S~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~p~~r 258 (294)
T 3r3s_A 186 SIQAYQP----SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT---QDKIPQFGQQTPMKR 258 (294)
T ss_dssp CGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSC---GGGSTTTTTTSTTSS
T ss_pred ChhhccC----CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCC---HHHHHHHHhcCCCCC
Confidence 4221111 12245677899988877543 489999999999876531110000 000000111111234
Q ss_pred ecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 124 FNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
+.+.+|+|++++.++.+.. . -++.+.+.| +..+
T Consensus 259 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG-G~~l 293 (294)
T 3r3s_A 259 AGQPAELAPVYVYLASQESSYVTAEVHGVCG-GEHL 293 (294)
T ss_dssp CBCGGGGHHHHHHHHSGGGTTCCSCEEEEST-TCCC
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCEEEECC-CccC
Confidence 6789999999999887653 2 378889985 5544
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.48 E-value=6.9e-07 Score=66.98 Aligned_cols=145 Identities=12% Similarity=0.208 Sum_probs=87.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHH----HHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++ .+++.+ ..++|.
T Consensus 78 ~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~i 156 (267)
T 1vl8_A 78 CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINI 156 (267)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999998888775 6899999998642 122334444 445566 678774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... . ..+...|..+|..++.+.+. .|+.++.++||++.......... ...............
T Consensus 157 sS~~~~~~-~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~ 230 (267)
T 1vl8_A 157 GSLTVEEV-T--MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS---DPEKLDYMLKRIPLG 230 (267)
T ss_dssp CCGGGTCC-C--SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT---CHHHHHHHHHTCTTS
T ss_pred CCcchhcc-C--CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc---ChHHHHHHHhhCCCC
Confidence 44331111 0 12345677899988877653 48999999999887653222110 000000000000012
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+.+.+|+|++++.++.++. .-++.+.+.|
T Consensus 231 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG 262 (267)
T 1vl8_A 231 RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG 262 (267)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCcCHHHHHHHHHHHcCccccCCcCCeEEECC
Confidence 36789999999999987643 2378888874
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.47 E-value=7.5e-07 Score=66.05 Aligned_cols=144 Identities=10% Similarity=0.034 Sum_probs=70.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC----------------------ccc----HHHHHHHHHHcCCccEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ----------------------FLD----QLKIVHAIKVAGNIKRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~----------------------~~~----~~~li~aa~~~g~vkr~ 47 (191)
+|++|.+++.++++ +.|+|||+++... +.+ .+.++..+++.+ ..++
T Consensus 65 ~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~i 143 (253)
T 3qiv_A 65 VDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAI 143 (253)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEE
Confidence 58999999888876 7899999998621 112 345566666666 6677
Q ss_pred Ec-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 LP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|. |+.... .+...|..+|..++.+.+. .|+..+.++||++........... ........+.
T Consensus 144 v~isS~~~~-------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~ 212 (253)
T 3qiv_A 144 VNQSSTAAW-------LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK----EMVDDIVKGL 212 (253)
T ss_dssp EEECC------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------
T ss_pred EEECCcccc-------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH----HHHHHHhccC
Confidence 63 432211 1223466788877766543 478899999998876532221110 0011111111
Q ss_pred ceeeecchhhHHHHHHHHhcCccc--CCceeEeecCCCcc
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNII 157 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~ 157 (191)
....+.+.+|+|++++.++.++.. -++.+++.| +..+
T Consensus 213 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg-G~~~ 251 (253)
T 3qiv_A 213 PLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDG-GQII 251 (253)
T ss_dssp -------CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC-Ceec
Confidence 123456789999999998876532 378889885 5544
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.47 E-value=6.1e-06 Score=62.50 Aligned_cols=167 Identities=14% Similarity=0.060 Sum_probs=97.9
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-----------------cccHHHHHHHHHHcCCccEEEc-CCc-ccCC--
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-----------------FLDQLKIVHAIKVAGNIKRFLP-SEF-GCEE-- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-----------------~~~~~~li~aa~~~g~vkr~v~-s~~-g~~~-- 56 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++.... .+|+|. |+. +...
T Consensus 69 ~Dl~d~~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~ 147 (291)
T 3rd5_A 69 LDLQDLSSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRI 147 (291)
T ss_dssp CCTTCHHHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCC
T ss_pred cCCCCHHHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCC
Confidence 58999999999887 5799999998532 345688899998887 788773 432 2110
Q ss_pred CCC------CCCCCchhhHHHHHHHHHHHHh-------cC--CCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 57 DRV------RPLPPFEAYLEKKRIVRRAIEA-------VE--IPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 57 ~~~------~~~~~~~~~~~~k~~~e~~l~~-------~~--~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
... ....+...|..+|..++.+.+. .| +....++||+........... ....... .....
T Consensus 148 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~-~~~~~~~----~~~~~ 222 (291)
T 3rd5_A 148 NLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGR-KLGDALM----SAATR 222 (291)
T ss_dssp CSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------
T ss_pred CcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccch-HHHHHHH----HHHHH
Confidence 000 1112334577899888776543 35 888889999876643322110 0000000 01111
Q ss_pred eeecchhhHHHHHHHHhcCcccCCceeEeecCCCc---------------cCHHHHHHHHHHHhCCce
Q 038413 122 AVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNI---------------ISQLELISLWEQKTGRSF 174 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~---------------~t~~e~~~~~~~~~g~~~ 174 (191)
+-..+.+|+|+.++.++.++...++.+.+.| +.. --..++.+...+.+|..+
T Consensus 223 ~~~~~~~~~A~~~~~l~~~~~~~G~~~~vdg-G~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~ 289 (291)
T 3rd5_A 223 VVATDADFGARQTLYAASQDLPGDSFVGPRF-GYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKTEF 289 (291)
T ss_dssp --CHHHHHHHHHHHHHHHSCCCTTCEEEETT-SSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTCCC
T ss_pred HHhCCHHHHHHHHHHHHcCCCCCCceeCCcc-cccCccccCCCCcccCCHHHHHHHHHHHHHHHcccc
Confidence 2334689999999999888644467777653 211 113356666666666543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.1e-07 Score=71.71 Aligned_cols=147 Identities=11% Similarity=0.094 Sum_probs=88.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH------HcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK------VAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~------~~g~vkr~v 48 (191)
+|++|.+++.++++ +.|+|||+++... +.+..++++++. +.+ ..++|
T Consensus 78 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv 156 (277)
T 2rhc_B 78 CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIV 156 (277)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEE
Confidence 58999998888775 6899999998532 233455566643 446 67877
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc----C-CCCC-CceEEE
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL----R-PFEP-HDDVVV 114 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~----~-~~~~-~~~~~~ 114 (191)
. |+...... ..+...|..+|..++.+.+. .|+.++.++||++..+...... . .... ......
T Consensus 157 ~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 232 (277)
T 2rhc_B 157 NIASTGGKQG----VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDR 232 (277)
T ss_dssp EECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred EECccccccC----CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHH
Confidence 4 44321111 12345677899888877653 4789999999998775432210 0 0000 000000
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.........+++.+|+|++++.++.++. .-++.+.+.|
T Consensus 233 ~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdG 272 (277)
T 2rhc_B 233 ITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCG 272 (277)
T ss_dssp HHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence 0000111347899999999999987653 2378888875
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.46 E-value=8.8e-06 Score=62.73 Aligned_cols=166 Identities=11% Similarity=0.030 Sum_probs=92.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|+|||+++... +.+..++++++ ++.+ ..++|.
T Consensus 66 ~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~i 144 (324)
T 3u9l_A 66 LDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWI 144 (324)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred eecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999999988876 7999999998531 23456666666 6667 677763
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccc--ccccCCCCCCceEEE---ecC
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFV--NVLLRPFEPHDDVVV---YGN 117 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~--~~~~~~~~~~~~~~~---~~~ 117 (191)
||....... ......|..+|..++.+.+. .|+..++++||.+..... ..............+ ...
T Consensus 145 sS~~~~~~~---~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (324)
T 3u9l_A 145 SSSSSAGGT---PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNA 221 (324)
T ss_dssp CCGGGTSCC---CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTT
T ss_pred ecchhccCC---CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhcccccc
Confidence 442211110 01235678899988877653 589999999998863211 000000000000000 000
Q ss_pred C--cc--------eeeecchhhHHHHHHHHhcCccc-CCceeEeecCCCccC-------HHHHHHHHHHHhCC
Q 038413 118 G--EA--------KAVFNYEEDIAKCTIKVINDPRT-CNRIVIYRPQTNIIS-------QLELISLWEQKTGR 172 (191)
Q Consensus 118 g--~~--------~~~~i~~~Dva~~~~~~l~~~~~-~~~~~~i~~~~~~~t-------~~e~~~~~~~~~g~ 172 (191)
+ +. ..+..+.+|+|++++.++..|.. ....+.++ +...+ ..++.+.+.+.+|.
T Consensus 222 ~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~g--p~~~~~~~~~~~~~~~~~~~~~~~g~ 292 (324)
T 3u9l_A 222 GLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVD--PAEDGADVGFSVLDRLRAEMLHRVGL 292 (324)
T ss_dssp THHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEEC--TTCCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeC--CcchHHHHHHHHHHHHHHHHHHHcCh
Confidence 0 00 01125789999999999998742 23445564 33445 33444445555554
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.46 E-value=7.4e-07 Score=66.37 Aligned_cols=149 Identities=7% Similarity=0.041 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~- 49 (191)
+|+.|.+++.++++. .|+|||+++... +.+..++++++.. .+...++|.
T Consensus 71 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~ 150 (265)
T 1h5q_A 71 CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVT 150 (265)
T ss_dssp CCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred eeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEe
Confidence 589999988887753 899999998632 2234455665543 331356663
Q ss_pred CCcccCCCC---CCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 50 SEFGCEEDR---VRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 50 s~~g~~~~~---~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|+....... .....+...|..+|..++.+++. .|+.+++++||++.......... ..........
T Consensus 151 sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~~~~~~~~~~ 225 (265)
T 1h5q_A 151 SSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK-----KIRDHQASNI 225 (265)
T ss_dssp CCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH-----HHHHHHHHTC
T ss_pred CCchhhccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccch-----hHHHHHHhcC
Confidence 442211111 00112345677899988877653 48999999999987754332100 0000000001
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCC
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTN 155 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~ 155 (191)
....+++.+|+|++++.++.++. ..++.+.+.| +.
T Consensus 226 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-G~ 262 (265)
T 1h5q_A 226 PLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDG-GQ 262 (265)
T ss_dssp TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECT-TG
T ss_pred cccCCCCHHHHHHHHHhhccCchhcCcCcEEEecC-CE
Confidence 11246789999999999998753 3478888885 44
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=98.46 E-value=7.1e-07 Score=67.15 Aligned_cols=143 Identities=8% Similarity=0.049 Sum_probs=89.4
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCCc---------------------cc----HHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQF---------------------LD----QLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~~---------------------~~----~~~li~aa~~~g~vkr~v 48 (191)
+|+.|.+++.++++. +|+|||+++.... .+ .+++++++++.+ ..++|
T Consensus 90 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv 168 (279)
T 3ctm_A 90 CNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLI 168 (279)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEE
T ss_pred eecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEE
Confidence 589999998888764 8999999874311 11 467888888888 78877
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
. |+....... ...+...|..+|..++.+++. .+ ..+.++||++........ .......+.....
T Consensus 169 ~isS~~~~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~~p 240 (279)
T 3ctm_A 169 ITSSISGKIVN--IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-----SKDMKAKWWQLTP 240 (279)
T ss_dssp EECCCTTSCC-----CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-----CHHHHHHHHHHST
T ss_pred EECchHhccCC--CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-----ChHHHHHHHHhCC
Confidence 4 442211110 012345677899999888764 35 788899998776532110 0000000000001
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
...+++.+|+|++++.++.++. ..++.+.+.|
T Consensus 241 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdg 274 (279)
T 3ctm_A 241 LGREGLTQELVGGYLYLASNASTFTTGSDVVIDG 274 (279)
T ss_dssp TCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ccCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence 1247889999999999988643 3478888885
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.45 E-value=1.4e-06 Score=65.35 Aligned_cols=143 Identities=12% Similarity=0.100 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccHHHHHHHH----HHcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQLKIVHAI----KVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~~~li~aa----~~~g~vkr~v 48 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|
T Consensus 64 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv 142 (271)
T 3tzq_B 64 VDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIV 142 (271)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEE
Confidence 58999999888876 7899999998641 12345556655 6666 66776
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
. |+...... ..+...|..+|..++.+.+. .|+....++||++......... .......+.....
T Consensus 143 ~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~ 214 (271)
T 3tzq_B 143 NISSATAHAA----YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL----PQPIVDIFATHHL 214 (271)
T ss_dssp EECCGGGTSB----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-------CHHHHHHHHTTST
T ss_pred EECCHHHcCC----CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC----CHHHHHHHHhcCC
Confidence 3 44221111 12345677899988877653 5899999999988765322100 0000000111111
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
...+.+.+|+|++++.++.+.. . -++.+.+.|
T Consensus 215 ~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 248 (271)
T 3tzq_B 215 AGRIGEPHEIAELVCFLASDRAAFITGQVIAADS 248 (271)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECC
Confidence 1235689999999999888653 2 378889985
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.4e-06 Score=64.94 Aligned_cols=149 Identities=11% Similarity=0.141 Sum_probs=91.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------cccHHHHHHHH----HHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLDQLKIVHAI----KVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~~~~li~aa----~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|. |
T Consensus 68 ~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~is 146 (256)
T 3gaf_A 68 CNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNIS 146 (256)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEc
Confidence 58999998887775 6899999998632 22344555554 4555 567663 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+...... ..+...|..+|..++.+.+. .|+....++||++........... ..............
T Consensus 147 S~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~p~~r 218 (256)
T 3gaf_A 147 SMAGENT----NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTP----EIERAMLKHTPLGR 218 (256)
T ss_dssp CGGGTCC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCH----HHHHHHHTTCTTSS
T ss_pred CHHHcCC----CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCH----HHHHHHHhcCCCCC
Confidence 4221111 12345677899988877653 478899999998876543221110 00000111111134
Q ss_pred ecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccCH
Q 038413 124 FNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIISQ 159 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t~ 159 (191)
+.+.+|+|++++.++.+.. . -++.+.+.| +...++
T Consensus 219 ~~~~~dva~~~~~L~s~~~~~itG~~i~vdg-G~~~~~ 255 (256)
T 3gaf_A 219 LGEAQDIANAALFLCSPAAAWISGQVLTVSG-GGVQEL 255 (256)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TSCCC-
T ss_pred CCCHHHHHHHHHHHcCCcccCccCCEEEECC-CccccC
Confidence 6789999999999887643 2 378899985 665543
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.44 E-value=8.4e-07 Score=65.62 Aligned_cols=143 Identities=10% Similarity=0.108 Sum_probs=84.4
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-CC-c
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP-SE-F 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~-s~-~ 52 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|. |+ .
T Consensus 67 ~D~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~ 145 (249)
T 3f9i_A 67 CNLANKEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIV 145 (249)
T ss_dssp CCTTSHHHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCC
T ss_pred cCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHH
Confidence 58899999988886 6899999998532 22334444444 4555 567763 43 2
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
+... ..+...|..+|..++.+.+. .|+..+.++||+.......... .........+.....+.
T Consensus 146 ~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~ 215 (249)
T 3f9i_A 146 GIAG-----NPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN-----EKQREAIVQKIPLGTYG 215 (249)
T ss_dssp C--C-----CSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC-----HHHHHHHHHHCTTCSCB
T ss_pred hccC-----CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC-----HHHHHHHHhcCCCCCCc
Confidence 2211 12345677899888776543 4788999999987664322210 00000001111223577
Q ss_pred chhhHHHHHHHHhcCccc--CCceeEeecCCC
Q 038413 126 YEEDIAKCTIKVINDPRT--CNRIVIYRPQTN 155 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~ 155 (191)
+.+|+|+++..++.++.. -|+.+.+.| +.
T Consensus 216 ~~~dva~~~~~l~s~~~~~~tG~~~~vdg-G~ 246 (249)
T 3f9i_A 216 IPEDVAYAVAFLASNNASYITGQTLHVNG-GM 246 (249)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEEST-TS
T ss_pred CHHHHHHHHHHHcCCccCCccCcEEEECC-CE
Confidence 899999999999987532 378888885 44
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.43 E-value=8.5e-07 Score=65.52 Aligned_cols=145 Identities=10% Similarity=0.132 Sum_probs=89.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++ ++.+ ..++|.
T Consensus 61 ~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i 139 (247)
T 3lyl_A 61 LNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISI 139 (247)
T ss_dssp CCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEE
Confidence 58999998888775 4799999998642 12334455544 3455 456663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+... ..+...|..+|..++.+.+. .|+....++||+.......... .............
T Consensus 140 sS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~ 209 (247)
T 3lyl_A 140 GSVVGSAG-----NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT-----DEQKSFIATKIPS 209 (247)
T ss_dssp CCTHHHHC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC-----HHHHHHHHTTSTT
T ss_pred cchhhccC-----CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc-----HHHHHHHhhcCCC
Confidence 33 22211 12245677899888777653 5789999999987664322210 0000111122223
Q ss_pred eeecchhhHHHHHHHHhcCccc--CCceeEeecCCCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNII 157 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~ 157 (191)
..+.+.+|+|+++..++.++.. -++.+.+.| +..+
T Consensus 210 ~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg-G~~~ 246 (247)
T 3lyl_A 210 GQIGEPKDIAAAVAFLASEEAKYITGQTLHVNG-GMYM 246 (247)
T ss_dssp CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TSSC
T ss_pred CCCcCHHHHHHHHHHHhCCCcCCccCCEEEECC-CEec
Confidence 4578899999999998876532 378888885 5443
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=6.7e-07 Score=66.73 Aligned_cols=147 Identities=12% Similarity=0.067 Sum_probs=89.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 61 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~i 139 (258)
T 3oid_A 61 ANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSI 139 (258)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58999999888775 4599999998532 22334445544 5555 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
||...... ..+...|..+|..++.+.+. .|+....++||++.......... ...............
T Consensus 140 sS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~ 212 (258)
T 3oid_A 140 SSLGSIRY----LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN---REDLLEDARQNTPAG 212 (258)
T ss_dssp EEGGGTSB----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT---HHHHHHHHHHHCTTS
T ss_pred CchhhCCC----CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc---CHHHHHHHHhcCCCC
Confidence 43222111 12345677899988877653 47889999999887654332110 000000000011113
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
.+.+.+|+|++++.++.++. --++.+.+.| +..
T Consensus 213 r~~~~~dva~~v~~L~s~~~~~itG~~i~vdG-G~~ 247 (258)
T 3oid_A 213 RMVEIKDMVDTVEFLVSSKADMIRGQTIIVDG-GRS 247 (258)
T ss_dssp SCBCHHHHHHHHHHHTSSTTTTCCSCEEEEST-TGG
T ss_pred CCcCHHHHHHHHHHHhCcccCCccCCEEEECC-Ccc
Confidence 46789999999999988753 2378889985 544
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.43 E-value=2.3e-06 Score=63.70 Aligned_cols=150 Identities=13% Similarity=0.147 Sum_probs=88.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCc-cEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNI-KRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~v-kr~v~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..+++++ +++.+ . .++|.
T Consensus 60 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~ 138 (258)
T 3a28_C 60 LDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIIN 138 (258)
T ss_dssp CCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEE
Confidence 58999998888775 7899999998532 1223334444 44456 6 67773
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc-------CCCCCCceEEE
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL-------RPFEPHDDVVV 114 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~-------~~~~~~~~~~~ 114 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++..+...... .... ......
T Consensus 139 isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~ 213 (258)
T 3a28_C 139 AASIAAIQG----FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPI-GENFKE 213 (258)
T ss_dssp ECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCT-THHHHH
T ss_pred ECcchhccC----CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCch-HHHHHH
Confidence 44321111 12345677899888876543 4899999999988765422210 0000 000000
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
+........+.+.+|+|++++.++.++. .-++.+.+.| +..+
T Consensus 214 ~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG-G~~~ 257 (258)
T 3a28_C 214 YSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDG-GMLY 257 (258)
T ss_dssp HHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS-SSCC
T ss_pred HHhcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECC-CEec
Confidence 0011111236789999999999987653 2378888875 5443
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=98.43 E-value=2.8e-06 Score=63.63 Aligned_cols=146 Identities=10% Similarity=0.062 Sum_probs=87.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..+++++ +++.+ ..++|.
T Consensus 82 ~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~i 160 (269)
T 3gk3_A 82 VDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNI 160 (269)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEe
Confidence 58999998888775 6899999998642 1233344444 34455 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEE-EecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV-VYGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~ 121 (191)
|+...... ..+...|..+|..++.+.+. .|+....++||+........... .... ........
T Consensus 161 sS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~~~ 231 (269)
T 3gk3_A 161 GSVNGSRG----AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ-----DVLEAKILPQIPV 231 (269)
T ss_dssp CCHHHHHC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------CCSGGGCTT
T ss_pred CChhhccC----CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch-----hHHHHHhhhcCCc
Confidence 44211111 12345677899888777542 47889999999876643222110 0000 01111111
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
..+.+.+|+|++++.++.++. .-++.+.+.| +..+
T Consensus 232 ~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg-G~~~ 268 (269)
T 3gk3_A 232 GRLGRPDEVAALIAFLCSDDAGFVTGADLAING-GMHM 268 (269)
T ss_dssp SSCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST-TSCC
T ss_pred CCccCHHHHHHHHHHHhCCCcCCeeCcEEEECC-CEeC
Confidence 345689999999999988753 2378899985 5554
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.42 E-value=1.8e-06 Score=64.09 Aligned_cols=146 Identities=10% Similarity=0.058 Sum_probs=87.6
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cc----cHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FL----DQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~----~~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++. .|++||+++... +. ..+.++..+++.+ .++|.
T Consensus 59 ~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~i 136 (253)
T 1hxh_A 59 HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINM 136 (253)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEE
Confidence 589999988887754 699999998632 01 2344555666655 56663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------c--CCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------V--EIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~--~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+...... ..+...|..+|..++.+.+. . |+.++.++||++.++..............+.-......
T Consensus 137 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p 212 (253)
T 1hxh_A 137 ASVSSWLP----IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNR 212 (253)
T ss_dssp CCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBT
T ss_pred cchhhcCC----CCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCc
Confidence 44322111 12345677899988877653 3 89999999999887643321111000000000000111
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
...+.+.+|+|++++.++.++. .-++.+.+.|
T Consensus 213 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg 246 (253)
T 1hxh_A 213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADN 246 (253)
T ss_dssp TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred cCCCCCHHHHHHHHHHHcCccccCCCCcEEEECC
Confidence 1246789999999999988753 2378888875
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=65.97 Aligned_cols=142 Identities=11% Similarity=0.122 Sum_probs=88.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 85 ~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~i 163 (269)
T 4dmm_A 85 ADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINI 163 (269)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999999888775 6899999998642 22334445544 4555 567663
Q ss_pred CCc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+. +... . .....|..+|..++.+.+. .|+....++||++.......... . . .......
T Consensus 164 sS~~~~~~-~----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~-~---~~~~~p~ 230 (269)
T 4dmm_A 164 ASVVGEMG-N----PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA----E-K---LLEVIPL 230 (269)
T ss_dssp CCHHHHHC-C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH----H-H---HGGGCTT
T ss_pred CchhhcCC-C----CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH----H-H---HHhcCCC
Confidence 442 2211 0 1245677899888776542 58999999999877643222110 0 0 0000111
Q ss_pred eeecchhhHHHHHHHHhcCccc---CCceeEeecCCCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPRT---CNRIVIYRPQTNII 157 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~---~~~~~~i~~~~~~~ 157 (191)
..+.+.+|+|++++.++.+|.. -++.+.+.| +..+
T Consensus 231 ~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdG-G~~~ 268 (269)
T 4dmm_A 231 GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDG-GLVM 268 (269)
T ss_dssp SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEEST-TSCC
T ss_pred CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECC-Ceec
Confidence 2356789999999999988532 278889985 5544
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.42 E-value=2e-06 Score=63.72 Aligned_cols=142 Identities=15% Similarity=0.184 Sum_probs=85.1
Q ss_pred CCCC-CHHHHHHhhccCcEEEEccCCCC-------------------cc----cHHHHHHHHHHcCCccEEEc-CCcccC
Q 038413 1 GELD-EHEKIVSILKEVDVVISTVAYPQ-------------------FL----DQLKIVHAIKVAGNIKRFLP-SEFGCE 55 (191)
Q Consensus 1 gD~~-d~~~l~~a~~g~d~V~~~~~~~~-------------------~~----~~~~li~aa~~~g~vkr~v~-s~~g~~ 55 (191)
+|+. +.+.+.+.+.++|+|||+++... +. ..+.++..+++.+ ..++|. |+....
T Consensus 66 ~D~~~~~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~ 144 (249)
T 1o5i_A 66 CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVI 144 (249)
T ss_dssp CCTTTCHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred eeHHHHHHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhc
Confidence 3552 34444444558999999998532 01 1345677787888 788774 443221
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEE-EecCCcceeeecch
Q 038413 56 EDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV-VYGNGEAKAVFNYE 127 (191)
Q Consensus 56 ~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~i~~ 127 (191)
.. ..+...|..+|..++.+.+. .|+.++.++||++.......... .... ..........+.+.
T Consensus 145 ~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~~~~~~~~~~~p~~~~~~~ 215 (249)
T 1o5i_A 145 SP----IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS-----EEKKKQVESQIPMRRMAKP 215 (249)
T ss_dssp SC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC-----HHHHHHHHTTSTTSSCBCH
T ss_pred CC----CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch-----hhHHHHHHhcCCCCCCcCH
Confidence 11 12345677889888766542 58999999999987754322110 0000 00011111346789
Q ss_pred hhHHHHHHHHhcCccc--CCceeEeec
Q 038413 128 EDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
+|+|++++.++.++.. .++.+.+.|
T Consensus 216 ~dvA~~i~~l~s~~~~~~tG~~~~vdg 242 (249)
T 1o5i_A 216 EEIASVVAFLCSEKASYLTGQTIVVDG 242 (249)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHcCccccCCCCCEEEECC
Confidence 9999999998876532 378888875
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.42 E-value=2.5e-06 Score=63.76 Aligned_cols=146 Identities=11% Similarity=0.083 Sum_probs=89.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..+++++ +++.+ ..++|.
T Consensus 67 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~i 145 (262)
T 3pk0_A 67 TDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLT 145 (262)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58999998888775 7899999998542 2233444444 44446 667763
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+.... ..+...|..+|..++.+.+. .|+....++||+........... ............
T Consensus 146 sS~~~~~~~----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~~p~ 216 (262)
T 3pk0_A 146 SSITGPITG----YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGE-----EYIASMARSIPA 216 (262)
T ss_dssp CCSBTTTBC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCH-----HHHHHHHTTSTT
T ss_pred echhhccCC----CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCH-----HHHHHHHhcCCC
Confidence 44 221111 12345677899988877653 58999999999987653221100 000000011111
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
..+.+.+|+|+++..++.++. --++.+.+.| +..+
T Consensus 217 ~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG-G~~~ 253 (262)
T 3pk0_A 217 GALGTPEDIGHLAAFLATKEAGYITGQAIAVDG-GQVL 253 (262)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TTTC
T ss_pred CCCcCHHHHHHHHHHHhCccccCCcCCEEEECC-Ceec
Confidence 235689999999999887653 2378888985 5443
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=66.29 Aligned_cols=152 Identities=12% Similarity=0.181 Sum_probs=90.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..+++++ +++.+ ..++|.
T Consensus 80 ~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~i 158 (277)
T 4dqx_A 80 VDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINT 158 (277)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999998888775 6899999998532 2233344444 45555 557663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc-CCCCCCceEEEecCCcce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL-RPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~ 121 (191)
|+...... ..+...|..+|..++.+.+. .|+....++||++......... ..................
T Consensus 159 sS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
T 4dqx_A 159 TSYTATSA----IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVM 234 (277)
T ss_dssp CCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTT
T ss_pred CchhhCcC----CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcc
Confidence 44222111 12345677899888877653 4788999999988765322111 000000000001112222
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccC
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIIS 158 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t 158 (191)
..+.+.+|+|++++.++.+.. .-++.+.+.| +..++
T Consensus 235 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG-G~~~~ 272 (277)
T 4dqx_A 235 DRMGTAEEIAEAMLFLASDRSRFATGSILTVDG-GSSIG 272 (277)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS-SSSSC
T ss_pred cCCcCHHHHHHHHHHHhCCccCCCcCCEEEECC-chhhh
Confidence 346789999999999988653 2378889985 55543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.1e-06 Score=65.49 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=85.1
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC-------------------cccHHHHHH----HHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++. .|++||+++... +.+..++++ .+++.+ ..++|.
T Consensus 66 ~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~i 144 (253)
T 2nm0_A 66 CDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLI 144 (253)
T ss_dssp CCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 589999998887754 699999998532 122334444 444556 677763
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|..++.+.+. .|+.++.++||++......... . .............
T Consensus 145 sS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----~-~~~~~~~~~~p~~ 215 (253)
T 2nm0_A 145 SSVVGLLGS----AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT----D-EQRANIVSQVPLG 215 (253)
T ss_dssp CCCCCCCCH----HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--------------CHHHHHTTCTTC
T ss_pred CchhhCCCC----CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC----H-HHHHHHHhcCCCC
Confidence 443211110 1133567789888777653 5789999999987654322110 0 0000000111112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
.+++.+|+|++++.++.++. .-++.+.+.| +..+
T Consensus 216 ~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdG-G~~~ 251 (253)
T 2nm0_A 216 RYARPEEIAATVRFLASDDASYITGAVIPVDG-GLGM 251 (253)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TTTC
T ss_pred CCcCHHHHHHHHHHHhCccccCCcCcEEEECC-cccc
Confidence 46889999999999988753 2378888875 5443
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.40 E-value=1.1e-06 Score=66.06 Aligned_cols=148 Identities=11% Similarity=0.088 Sum_probs=88.4
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++.+ +.|++||+++... +.+..++++++ ++.+ ..++|. |
T Consensus 86 ~Dv~d~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~is 164 (273)
T 3uf0_A 86 ADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIA 164 (273)
T ss_dssp CCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred ecCCCHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEc
Confidence 58899888776643 6899999998642 22334445544 5566 667663 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+...... ..+...|..+|..++.+.+. .|+....++||++........... ...............
T Consensus 165 S~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r 237 (273)
T 3uf0_A 165 SMLSFQG----GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD---DERAAEITARIPAGR 237 (273)
T ss_dssp CGGGTSC----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS---HHHHHHHHHHSTTSS
T ss_pred chHhcCC----CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC---HHHHHHHHhcCCCCC
Confidence 4221111 12345677899988877653 589999999998876533221100 000000000011124
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
+.+.+|+|++++.++.+.. --|+.+.+.| +..+
T Consensus 238 ~~~pedva~~v~~L~s~~a~~itG~~i~vdG-G~~~ 272 (273)
T 3uf0_A 238 WATPEDMVGPAVFLASDAASYVHGQVLAVDG-GWLA 272 (273)
T ss_dssp CBCGGGGHHHHHHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred CCCHHHHHHHHHHHhCchhcCCcCCEEEECc-CccC
Confidence 6789999999999888643 2378889985 5543
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.39 E-value=6.8e-07 Score=66.10 Aligned_cols=148 Identities=11% Similarity=0.106 Sum_probs=87.1
Q ss_pred CCCCCHHHHHHhh---ccCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSIL---KEVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~---~g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~-s~~g 53 (191)
+|++|.+++.+++ .+.|+|||+++... +.+..+++++ +++.+ ..++|. |+..
T Consensus 57 ~D~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~ 135 (246)
T 2ag5_A 57 LDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVA 135 (246)
T ss_dssp CCTTCHHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSB
T ss_pred eeCCCHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechH
Confidence 5899999888775 36899999998542 1223344444 44566 678773 4422
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCC-CceEEEecCCcceeeec
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEP-HDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i 125 (191)
..... ..+...|..+|..++.+.+. .|+.+++++||++.++........... ......+........+.
T Consensus 136 ~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (246)
T 2ag5_A 136 SSVKG---VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFA 212 (246)
T ss_dssp TTTBC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCE
T ss_pred hCcCC---CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCC
Confidence 11111 01345677899988877653 489999999999887543221000000 00000000000012367
Q ss_pred chhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 126 YEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+.+|+|++++.++.++. .-++.+.+.|
T Consensus 213 ~~~dvA~~v~~l~s~~~~~~tG~~i~vdg 241 (246)
T 2ag5_A 213 TAEEIAMLCVYLASDESAYVTGNPVIIDG 241 (246)
T ss_dssp EHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred CHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 89999999999987653 2378888874
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.39 E-value=1.3e-06 Score=65.40 Aligned_cols=142 Identities=11% Similarity=0.129 Sum_probs=86.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+ .+.++..+++.+ ..++|.
T Consensus 80 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~i 158 (266)
T 3grp_A 80 ANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINI 158 (266)
T ss_dssp CCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred eecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999998888775 6899999998642 122 344555566666 667763
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
||....... .+...|..+|..++.+.+. .|+....++||++......... ..............
T Consensus 159 sS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~ 229 (266)
T 3grp_A 159 TSIVGVVGN----PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN-----EKQKEAIMAMIPMK 229 (266)
T ss_dssp CCC-----------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC-----HHHHHHHHTTCTTC
T ss_pred CCHHHcCCC----CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC-----HHHHHHHHhcCCCC
Confidence 442211110 2245677899888776543 4789999999988765332210 00000011111123
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+.+.+|+|++++.++.+.. . -++.+.+.|
T Consensus 230 r~~~~edvA~~v~~L~s~~~~~itG~~i~vdG 261 (266)
T 3grp_A 230 RMGIGEEIAFATVYLASDEAAYLTGQTLHING 261 (266)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence 46678999999999887653 2 378888875
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.39 E-value=5.3e-06 Score=62.19 Aligned_cols=143 Identities=9% Similarity=0.060 Sum_probs=81.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHc-------CCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVA-------GNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~-------g~vkr 46 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++... + ..+
T Consensus 83 ~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~-~g~ 161 (272)
T 4e3z_A 83 GDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQ-GGA 161 (272)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCC-CEE
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCC-CCE
Confidence 58999998887775 6799999998532 12344555555432 2 345
Q ss_pred EEc-CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 47 FLP-SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 47 ~v~-s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
+|. |+ .+... . ......|..+|..++.+.+. .|+..+.++||++........... ........
T Consensus 162 iv~isS~~~~~~-~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~ 233 (272)
T 4e3z_A 162 IVNVSSMAAILG-S---ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP----DRAREMAP 233 (272)
T ss_dssp EEEECCTHHHHC-C---TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------------
T ss_pred EEEEcchHhccC-C---CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCCh----HHHHHHhh
Confidence 653 44 22111 0 01234577899888876542 489999999998876542221110 01111111
Q ss_pred CcceeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
......+.+.+|+|++++.++.++.. -++.+++.|
T Consensus 234 ~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdg 270 (272)
T 4e3z_A 234 SVPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSG 270 (272)
T ss_dssp CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cCCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecC
Confidence 11123356799999999999876532 378888874
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.39 E-value=1.9e-06 Score=63.46 Aligned_cols=145 Identities=14% Similarity=0.091 Sum_probs=83.5
Q ss_pred CCCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.| +++.+++ .+.|++||+++... +.+. +.++..+++.+ ..++|.
T Consensus 50 ~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~i 127 (239)
T 2ekp_A 50 TDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFI 127 (239)
T ss_dssp CCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred cCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 47777 6555443 37899999998532 1222 33444446667 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+........ ..+...|..+|..++.+.+. .|+.++.++||++..+........ ..............
T Consensus 128 sS~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~p~~ 202 (239)
T 2ekp_A 128 GSVTTFTAGG--PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQN---PELYEPITARIPMG 202 (239)
T ss_dssp CCGGGTSCCT--TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC---HHHHHHHHTTCTTS
T ss_pred CchhhccCCC--CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccC---HHHHHHHHhcCCCC
Confidence 4422111110 12345677899888876543 489999999999877643221100 00000000000112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+.+.+|+|++++.++.++. .-++.+.+.|
T Consensus 203 ~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg 234 (239)
T 2ekp_A 203 RWARPEEIARVAAVLCGDEAEYLTGQAVAVDG 234 (239)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CCcCHHHHHHHHHHHcCchhcCCCCCEEEECC
Confidence 36789999999999887643 2378888874
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.39 E-value=5.9e-06 Score=61.49 Aligned_cols=149 Identities=10% Similarity=0.015 Sum_probs=86.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH-----HHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI-----KVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa-----~~~g~vkr~v~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++.+++ ++.+ ..++|.
T Consensus 62 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~g~iv~ 140 (257)
T 3imf_A 62 MDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-KGNIIN 140 (257)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-CcEEEE
Confidence 58999998888775 6899999998532 22344555555 3443 456663
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH--------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE--------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~--------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|+ .+... . .....|..+|..++.+.+ ..|+....++||++........... ............
T Consensus 141 isS~~~~~~-~----~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~ 213 (257)
T 3imf_A 141 MVATYAWDA-G----PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWI--SEEMAKRTIQSV 213 (257)
T ss_dssp ECCGGGGSC-C----TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------CCSHHHHTTS
T ss_pred ECchhhccC-C----CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhccc--CHHHHHHHHhcC
Confidence 43 33211 1 224467788888776643 2489999999998765432111000 000000000111
Q ss_pred ceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccC
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
....+.+.+|+|++++.++.++. . -++.+.+.| +..++
T Consensus 214 p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG-G~~~~ 253 (257)
T 3imf_A 214 PLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDG-GQHLH 253 (257)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TTTSC
T ss_pred CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC-CcccC
Confidence 11246789999999999988653 2 378888885 55543
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.38 E-value=3.8e-06 Score=62.96 Aligned_cols=141 Identities=6% Similarity=0.056 Sum_probs=85.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+. +.++..+++.+ ..++|.
T Consensus 86 ~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~i 164 (271)
T 4iin_A 86 FDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNV 164 (271)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEE
Confidence 58999998888775 6899999998642 1222 33444445566 667663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+... ..+...|..+|..++.+.+. .++..+.++||+.......... .............
T Consensus 165 sS~~~~~~-----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-----~~~~~~~~~~~~~ 234 (271)
T 4iin_A 165 ASIIGERG-----NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK-----DELKADYVKNIPL 234 (271)
T ss_dssp CCHHHHHC-----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----------------CGGGCTT
T ss_pred echhhcCC-----CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc-----HHHHHHHHhcCCc
Confidence 43 22211 12345677899888877653 5788999999987664322211 0011111111122
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+.+.+|+|+++..++.++. .-|+.+.+.|
T Consensus 235 ~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdG 267 (271)
T 4iin_A 235 NRLGSAKEVAEAVAFLLSDHSSYITGETLKVNG 267 (271)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCC
Confidence 346789999999999988653 2378888874
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.37 E-value=1.9e-06 Score=63.72 Aligned_cols=141 Identities=6% Similarity=-0.003 Sum_probs=84.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 56 ~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~i 134 (245)
T 1uls_A 56 MDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLT 134 (245)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999999888775 3799999998532 12234444444 4456 677764
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.. .... .....|..+|..++.+.+. .|+.++.++||++........ ...............
T Consensus 135 sS~~-~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~~p~~ 204 (245)
T 1uls_A 135 ASRV-YLGN----LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-----PEKVREKAIAATPLG 204 (245)
T ss_dssp CCGG-GGCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-----CHHHHHHHHHTCTTC
T ss_pred ccch-hcCC----CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-----CHHHHHHHHhhCCCC
Confidence 4433 2111 1234677888887766542 589999999998866432211 000000000000011
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.+.+.+|+|++++.++.++. .-++.+.+.|
T Consensus 205 ~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg 236 (245)
T 1uls_A 205 RAGKPLEVAYAALFLLSDESSFITGQVLFVDG 236 (245)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCcCHHHHHHHHHHHhCchhcCCcCCEEEECC
Confidence 36789999999999988653 2378888875
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.6e-05 Score=59.31 Aligned_cols=145 Identities=8% Similarity=-0.032 Sum_probs=85.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------cccHHHHHHHH----HHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLDQLKIVHAI----KVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~~~~li~aa----~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|. |
T Consensus 78 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~is 156 (260)
T 3gem_A 78 GDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHIS 156 (260)
T ss_dssp CCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEEC
Confidence 58999998888775 5899999998542 22334444444 4455 567663 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
+...... ..+...|..+|..++.+.+. .++....++||++......... ............-+
T Consensus 157 S~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~-------~~~~~~~~~p~~r~ 225 (260)
T 3gem_A 157 DDVTRKG----SSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAA-------YRANALAKSALGIE 225 (260)
T ss_dssp CGGGGTC----CSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC----------------------CCSCCC
T ss_pred ChhhcCC----CCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHH-------HHHHHHhcCCCCCC
Confidence 4221111 12345677899988877653 2588888999987653211100 00000011111234
Q ss_pred cchhhHHHHHHHHhcCcccCCceeEeecCCCccC
Q 038413 125 NYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIIS 158 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t 158 (191)
.+.+|+|++++.++..+..-++.+.+.| +..++
T Consensus 226 ~~~edva~~v~~L~~~~~itG~~i~vdG-G~~~~ 258 (260)
T 3gem_A 226 PGAEVIYQSLRYLLDSTYVTGTTLTVNG-GRHVK 258 (260)
T ss_dssp CCTHHHHHHHHHHHHCSSCCSCEEEEST-TTTTC
T ss_pred CCHHHHHHHHHHHhhCCCCCCCEEEECC-CcccC
Confidence 5789999999999865544588899985 66554
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.35 E-value=1.5e-06 Score=65.02 Aligned_cols=147 Identities=7% Similarity=0.059 Sum_probs=87.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..+++++ +++.+ ..++|.
T Consensus 53 ~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~i 131 (264)
T 2dtx_A 53 CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNI 131 (264)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999999888876 6899999998532 1233344444 44456 678773
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh----cC--CCeEEEecccccccccccccCC--CCCC----ceEEEecC
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA----VE--IPYTFVSANCYGAYFVNVLLRP--FEPH----DDVVVYGN 117 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~----~~--~~~tilrp~~~~~~~~~~~~~~--~~~~----~~~~~~~~ 117 (191)
|+...... ..+...|..+|..++.+.+. .+ +.++.++||++..+........ .... .....+..
T Consensus 132 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (264)
T 2dtx_A 132 SSVQASII----TKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGH 207 (264)
T ss_dssp CCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred CCchhccC----CCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHh
Confidence 44322111 12345677899988877653 12 8889999998876543221000 0000 00000000
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
......+++.+|+|++++.++.++. ..++.+.+.|
T Consensus 208 ~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 244 (264)
T 2dtx_A 208 EHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDG 244 (264)
T ss_dssp HSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence 0111247899999999999987653 2378888875
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.34 E-value=2.3e-06 Score=64.41 Aligned_cols=142 Identities=7% Similarity=0.101 Sum_probs=85.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCc----cE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNI----KR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~v----kr 46 (191)
+|++|.+++.++++ +.|+|||+++... +.+. +.++..+++.+ . .+
T Consensus 84 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~ 162 (276)
T 2b4q_A 84 ADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPAR 162 (276)
T ss_dssp CCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEE
T ss_pred eeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCE
Confidence 58999998888775 6899999998532 1222 33444455555 4 67
Q ss_pred EEc-CCcccCCCCCCCCCCch-hhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 47 FLP-SEFGCEEDRVRPLPPFE-AYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 47 ~v~-s~~g~~~~~~~~~~~~~-~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
+|. |+....... .... .|..+|..++.+.+. .|+.++.++||++........... .. .. ...
T Consensus 163 iV~isS~~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~-~~---~~~ 233 (276)
T 2b4q_A 163 VINIGSVAGISAM----GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND-PQ-AL---EAD 233 (276)
T ss_dssp EEEECCGGGTCCC----CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC-HH-HH---HHH
T ss_pred EEEECCHHHcCCC----CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh-HH-HH---HHh
Confidence 763 442211111 1123 677899988877653 489999999998876542221100 00 00 000
Q ss_pred --CcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 118 --GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 118 --g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
......+.+.+|+|++++.++.++. ..++.+.+.|
T Consensus 234 ~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 272 (276)
T 2b4q_A 234 SASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDG 272 (276)
T ss_dssp HHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 0001236789999999999988653 2378888874
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.34 E-value=1.4e-06 Score=64.61 Aligned_cols=145 Identities=10% Similarity=0.110 Sum_probs=87.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+ .+.++..+++.+ ..++|.
T Consensus 70 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~i 148 (256)
T 3ezl_A 70 GNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINI 148 (256)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999998888775 6799999998642 122 233455556666 667763
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+.+. .|+....++||+........... .............
T Consensus 149 sS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~ 219 (256)
T 3ezl_A 149 SSVNGQKG----QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP-----DVLEKIVATIPVR 219 (256)
T ss_dssp CCCCGGGS----CSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-----HHHHHHHHHSTTS
T ss_pred cchhhccC----CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCH-----HHHHHHHhcCCCC
Confidence 44221111 12345677899888776542 57889999999877654322100 0000000001112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
.+.+.+|+|++++.++.+.. .-++.+.+.| +..
T Consensus 220 ~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg-G~~ 254 (256)
T 3ezl_A 220 RLGSPDEIGSIVAWLASEESGFSTGADFSLNG-GLH 254 (256)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TSC
T ss_pred CCcCHHHHHHHHHHHhCCcccCCcCcEEEECC-CEe
Confidence 45689999999999887643 2378888875 443
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.33 E-value=2.8e-06 Score=63.85 Aligned_cols=150 Identities=8% Similarity=0.061 Sum_probs=85.4
Q ss_pred CCCCCHHHHHHhh--------ccCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc
Q 038413 1 GELDEHEKIVSIL--------KEVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~--------~g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~ 49 (191)
+|+.|.+++.+++ .+.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 77 ~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~ 155 (273)
T 1ae1_A 77 CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIF 155 (273)
T ss_dssp CCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 5899999888776 46899999998632 22334455554 4566 677763
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCce-EEEecCCcc
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDD-VVVYGNGEA 120 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~ 120 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++..+.............. .........
T Consensus 156 isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p 231 (273)
T 1ae1_A 156 LSSIAGFSA----LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP 231 (273)
T ss_dssp ECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST
T ss_pred EcCHhhcCC----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC
Confidence 44222111 12345677899988877553 489999999998877542221100000000 000000000
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNI 156 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~ 156 (191)
...+.+.+|+|++++.++.++. . -++.+.+.| +..
T Consensus 232 ~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG-G~~ 268 (273)
T 1ae1_A 232 MGRAGKPQEVSALIAFLCFPAASYITGQIIWADG-GFT 268 (273)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGG
T ss_pred CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECC-Ccc
Confidence 1236789999999999887643 2 378888885 543
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.33 E-value=1.5e-06 Score=65.33 Aligned_cols=148 Identities=8% Similarity=0.098 Sum_probs=88.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHH----HHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKI----VHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~l----i~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++ +..+++.+ ..++|.
T Consensus 82 ~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~i 160 (271)
T 4ibo_A 82 FDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNI 160 (271)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58999999888876 6899999998642 1233444 44444555 557663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+.+. .|+....++||++........... ..............
T Consensus 161 sS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~ 233 (271)
T 4ibo_A 161 GSLTSELA----RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN---PEFDAWVKARTPAK 233 (271)
T ss_dssp CCGGGTSB----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC---HHHHHHHHHHSTTC
T ss_pred ccHHhCCC----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC---HHHHHHHHhcCCCC
Confidence 44222111 12345677899888877653 588999999998876543221100 00000000001112
Q ss_pred eecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
.+.+.+|+|++++.++.+.. --|+.+.+.| +...
T Consensus 234 r~~~pedva~~v~~L~s~~~~~itG~~i~vdG-G~~~ 269 (271)
T 4ibo_A 234 RWGKPQELVGTAVFLSASASDYVNGQIIYVDG-GMLS 269 (271)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred CCcCHHHHHHHHHHHhCccccCCCCcEEEECC-Ceec
Confidence 35679999999999887643 2378889985 5544
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.33 E-value=3.9e-06 Score=63.79 Aligned_cols=147 Identities=6% Similarity=-0.007 Sum_probs=88.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..++++++.. .+ ..++|.
T Consensus 79 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~i 157 (303)
T 1yxm_A 79 CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNI 157 (303)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEE
Confidence 58999999888876 4899999998421 2345677777654 23 356663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccc-ccccC--CCCCCceEEEecCCc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFV-NVLLR--PFEPHDDVVVYGNGE 119 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~-~~~~~--~~~~~~~~~~~~~g~ 119 (191)
|+.. ... ......|..+|..++.+.+. .|+.+++++||++.+... ..... ....... . ...
T Consensus 158 sS~~-~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---~-~~~ 228 (303)
T 1yxm_A 158 IVPT-KAG----FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGS---F-QKI 228 (303)
T ss_dssp CCCC-TTC----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTG---G-GGS
T ss_pred Eeec-ccC----CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHH---H-hcC
Confidence 4433 111 11234566788777766542 489999999999877531 11110 0000000 0 000
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccC
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIIS 158 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t 158 (191)
....+.+.+|+|++++.++.++. ..++.+.+.| +..++
T Consensus 229 p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~g-G~~~~ 268 (303)
T 1yxm_A 229 PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDG-GRSLY 268 (303)
T ss_dssp TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGC
T ss_pred cccCCCCHHHHHHHHHHHhCcccccCCCcEEEECC-Ceecc
Confidence 01236789999999999987643 2378888885 55554
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.3e-05 Score=60.48 Aligned_cols=149 Identities=12% Similarity=0.079 Sum_probs=87.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHH----HHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAI----KVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa----~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 84 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~ 162 (283)
T 3v8b_A 84 ADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVV 162 (283)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEE
Confidence 58999998887775 6899999998531 22345555555 6666 567663
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCC--CceEEEecCCc
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEP--HDDVVVYGNGE 119 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~--~~~~~~~~~g~ 119 (191)
|+........ ..+...|..+|..++.+.+. .|+....++||+............... ...........
T Consensus 163 isS~~~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T 3v8b_A 163 VSSINGTRTFT--TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQV 240 (283)
T ss_dssp ECCSBTTTBCC--STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSC
T ss_pred EcChhhccCCC--CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcC
Confidence 4422111001 12345677899988877653 478889999998776533221100000 00000111110
Q ss_pred ce--eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 120 AK--AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 120 ~~--~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.. ..+...+|||++++.++.+.. . -|+.+.+.|
T Consensus 241 p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 277 (283)
T 3v8b_A 241 PITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDG 277 (283)
T ss_dssp GGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred ccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECc
Confidence 00 234678999999999887643 2 378888875
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.32 E-value=8.9e-06 Score=61.38 Aligned_cols=153 Identities=10% Similarity=0.034 Sum_probs=90.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHH----HHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAI----KVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa----~~~g~vkr~v~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ -.++|.
T Consensus 64 ~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~ 142 (280)
T 3tox_A 64 GDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTF 142 (280)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEE
Confidence 58999998888775 6899999998531 12334444444 4445 456653
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+.... ..+...|..+|..++.+.+. .|+....++||+........... ...............
T Consensus 143 isS~~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~p 217 (280)
T 3tox_A 143 TSSFVGHTAG----FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLP-GAAPETRGFVEGLHA 217 (280)
T ss_dssp ECCSBTTTBC----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGST-TCCTHHHHHHHTTST
T ss_pred EcChhhCcCC----CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhcc-ccCHHHHHHHhccCc
Confidence 43 222111 12345677899888877653 47899999999877653222110 000000001111111
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccCHH
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIISQL 160 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t~~ 160 (191)
...+.+.+|+|++++.++.++. . -|+.+.+.| +..++..
T Consensus 218 ~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG-G~~~~~~ 258 (280)
T 3tox_A 218 LKRIARPEEIAEAALYLASDGASFVTGAALLADG-GASVTKA 258 (280)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGCC-
T ss_pred cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECC-Ccccccc
Confidence 2346789999999999988753 2 378899985 6666543
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.31 E-value=5.9e-06 Score=62.25 Aligned_cols=151 Identities=10% Similarity=0.061 Sum_probs=89.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..+++++ +++.+ -.++|.
T Consensus 82 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~i 160 (277)
T 3gvc_A 82 VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNL 160 (277)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58999998887765 6899999998642 1223344444 44455 456663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecC---Cc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN---GE 119 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~---g~ 119 (191)
|+...... ..+...|..+|..++.+.+. .|+....++||++............ .......... ..
T Consensus 161 sS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~ 235 (277)
T 3gvc_A 161 SSLAGQVA----VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMF-DGALGAGGARSMIAR 235 (277)
T ss_dssp CCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC-------CCHHHHHHH
T ss_pred cchhhccC----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcc-hhhHHHHhhhhhhhc
Confidence 44221111 12345677899988877652 5899999999998775432211100 0000000000 00
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccC
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIIS 158 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t 158 (191)
....+.+.+|+|++++.++.+.. --++.+.+.| +...+
T Consensus 236 ~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG-G~~~~ 275 (277)
T 3gvc_A 236 LQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADG-GTIAA 275 (277)
T ss_dssp HHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGS
T ss_pred cccCCCCHHHHHHHHHHHcCCccCCccCcEEEECC-cchhc
Confidence 11246789999999999987653 2378888985 55443
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.31 E-value=4.5e-06 Score=62.01 Aligned_cols=148 Identities=11% Similarity=0.130 Sum_probs=85.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ++|++||+++... +.+. +.++..+++.+...++|.
T Consensus 58 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i 137 (256)
T 1geg_A 58 VDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINA 137 (256)
T ss_dssp CCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 58999999888876 7899999998532 1122 333444444331246653
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc----C-CCC-CCceEEEec
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL----R-PFE-PHDDVVVYG 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~----~-~~~-~~~~~~~~~ 116 (191)
|+....... .+...|..+|..++.+.+. .|+.++.++||++..+...... . ... .......+.
T Consensus 138 sS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (256)
T 1geg_A 138 CSQAGHVGN----PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFA 213 (256)
T ss_dssp CCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred CchhhcCCC----CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHH
Confidence 442211111 2245677899888877653 4899999999998765422210 0 000 000000000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.......+.+.+|+|++++.++.++. ..++.+.+.|
T Consensus 214 ~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 251 (256)
T 1geg_A 214 KRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG 251 (256)
T ss_dssp TTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 11111246889999999999987653 2478888875
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.31 E-value=1.9e-06 Score=63.86 Aligned_cols=141 Identities=11% Similarity=0.100 Sum_probs=86.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 62 ~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~i 140 (248)
T 3op4_A 62 LNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINV 140 (248)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred EeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 58999999888876 7899999998642 22334455544 4455 567663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|| .+... ..+...|..+|..++.+.+. .|+....++||+.......... .............
T Consensus 141 sS~~~~~~-----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-----~~~~~~~~~~~p~ 210 (248)
T 3op4_A 141 GSVVGTMG-----NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN-----DEQRTATLAQVPA 210 (248)
T ss_dssp CCHHHHHC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC-----HHHHHHHHHTCTT
T ss_pred cchhhcCC-----CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC-----HHHHHHHHhcCCC
Confidence 44 22211 12345677899888776553 5889999999987654322110 0000000011112
Q ss_pred eeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
..+.+.+|+|++++.++.+... -++.+.+.|
T Consensus 211 ~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdg 243 (248)
T 3op4_A 211 GRLGDPREIASAVAFLASPEAAYITGETLHVNG 243 (248)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHcCCccCCccCcEEEECC
Confidence 3467899999999988876532 378888875
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.2e-06 Score=64.36 Aligned_cols=145 Identities=12% Similarity=0.128 Sum_probs=87.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++. +.+ -.++|.
T Consensus 84 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~i 162 (270)
T 3ftp_A 84 LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNI 162 (270)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred EeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 58999998888775 6899999998532 233445555543 444 446663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|| .+... ..+...|..+|..++.+.+. .|+....++||++.......... ............
T Consensus 163 sS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-----~~~~~~~~~~p~ 232 (270)
T 3ftp_A 163 TSVVGSAG-----NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQ-----EQQTALKTQIPL 232 (270)
T ss_dssp CCHHHHHC-----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCH-----HHHHHHHTTCTT
T ss_pred CchhhCCC-----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCH-----HHHHHHHhcCCC
Confidence 44 22211 02345677899988776543 47899999999887653222100 000001111112
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
..+.+.+|+|++++.++.+.. --++.+.+.| +..+
T Consensus 233 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG-G~~~ 269 (270)
T 3ftp_A 233 GRLGSPEDIAHAVAFLASPQAGYITGTTLHVNG-GMFM 269 (270)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TSSC
T ss_pred CCCCCHHHHHHHHHHHhCCCcCCccCcEEEECC-Cccc
Confidence 346789999999999887543 2378889985 5544
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=3.2e-06 Score=64.18 Aligned_cols=146 Identities=10% Similarity=0.126 Sum_probs=90.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHcC-CccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAG-NIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g-~vkr~v~-s~ 51 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++...- .-.++|. |+
T Consensus 104 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 104 GDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp SCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 58999998887775 6899999988531 234567777776542 0235553 43
Q ss_pred -cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 52 -FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 52 -~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
.+... . .....|..+|..++.+.+. .|+....++||++.......... ......+........
T Consensus 184 ~~~~~~-~----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~~p~~r 254 (291)
T 3ijr_A 184 IVAYEG-N----ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD----EKKVSQFGSNVPMQR 254 (291)
T ss_dssp THHHHC-C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC----HHHHHHTTTTSTTSS
T ss_pred hHhcCC-C----CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC----HHHHHHHHccCCCCC
Confidence 22211 0 2245677899988877653 48999999999887754322110 000011111222234
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
+.+.+|+|++++.++.+.. .-++.+.+.| +..
T Consensus 255 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG-G~~ 288 (291)
T 3ijr_A 255 PGQPYELAPAYVYLASSDSSYVTGQMIHVNG-GVI 288 (291)
T ss_dssp CBCGGGTHHHHHHHHSGGGTTCCSCEEEESS-SCC
T ss_pred CcCHHHHHHHHHHHhCCccCCCcCCEEEECC-Ccc
Confidence 6789999999999887653 2378888885 443
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=2.9e-05 Score=56.71 Aligned_cols=132 Identities=14% Similarity=0.212 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEEcC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFLPS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v~s 50 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++. +.+ -+.++.+
T Consensus 59 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~ii~~s 137 (235)
T 3l77_A 59 LDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG-GLALVTT 137 (235)
T ss_dssp CCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC
T ss_pred eccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcEEEEe
Confidence 58999999998876 6899999998642 233445555543 334 3344443
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeee
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
+ .+... . .....|..+|..++.+.+. .++..+.++||+........... ......+
T Consensus 138 S~~~~~~-~----~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~-------------~~~~~~~ 199 (235)
T 3l77_A 138 SDVSARL-I----PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG-------------KPKEKGY 199 (235)
T ss_dssp CGGGSSC-C----TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC-------------CCGGGTC
T ss_pred cchhccc-C----CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC-------------cccccCC
Confidence 3 33211 1 1234677889888877654 48999999999876543221110 1111256
Q ss_pred cchhhHHHHHHHHhcCccc-C-CceeEee
Q 038413 125 NYEEDIAKCTIKVINDPRT-C-NRIVIYR 151 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~~-~-~~~~~i~ 151 (191)
.+.+|+|++++.++.++.. . ++.+...
T Consensus 200 ~~p~dva~~v~~l~~~~~~~~~~~~~~~~ 228 (235)
T 3l77_A 200 LKPDEIAEAVRCLLKLPKDVRVEELMLRS 228 (235)
T ss_dssp BCHHHHHHHHHHHHTSCTTCCCCEEEECC
T ss_pred CCHHHHHHHHHHHHcCCCCCccceEEEee
Confidence 7899999999999998752 2 4444444
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.28 E-value=1.4e-05 Score=59.57 Aligned_cols=150 Identities=13% Similarity=0.064 Sum_probs=86.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC-C-------------------cccHHHHHHHHHHcCCcc--EEE-cC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP-Q-------------------FLDQLKIVHAIKVAGNIK--RFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~-~-------------------~~~~~~li~aa~~~g~vk--r~v-~s 50 (191)
+|++|.+++.++++ +.|++||+++.. . +.+..++++++...- .+ ++| .|
T Consensus 65 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~is 143 (259)
T 3edm_A 65 ADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM-AKGGAIVTFS 143 (259)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEEC
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCEEEEEc
Confidence 58999999888875 689999999753 1 234567777776653 33 555 34
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+ .+.... ..+...|..+|..++.+.+. .++....++||+............ ..............
T Consensus 144 S~~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~p~~r 215 (259)
T 3edm_A 144 SQAGRDGG----GPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKP----EVRERVAGATSLKR 215 (259)
T ss_dssp CHHHHHCC----STTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--------------------------C
T ss_pred CHHhccCC----CCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccCh----HHHHHHHhcCCCCC
Confidence 3 222111 12245677899988877653 237788899998766543222111 01111111112234
Q ss_pred ecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccCHH
Q 038413 124 FNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIISQL 160 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t~~ 160 (191)
+.+.+|+|++++.++.+.. . -|+.+.+.| +...+..
T Consensus 216 ~~~pedva~~v~~L~s~~~~~itG~~i~vdG-g~~~~~~ 253 (259)
T 3edm_A 216 EGSSEDVAGLVAFLASDDAAYVTGACYDING-GVLFSEG 253 (259)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESB-CSSBC--
T ss_pred CcCHHHHHHHHHHHcCccccCccCCEEEECC-CcCCCCC
Confidence 6789999999999887653 2 378899985 5555443
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.28 E-value=5.6e-06 Score=62.92 Aligned_cols=146 Identities=10% Similarity=0.075 Sum_probs=89.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 98 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~i 176 (293)
T 3rih_A 98 LDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILT 176 (293)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEE
T ss_pred EeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 58999988877764 5799999998642 23345566655 5666 667763
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+.... ..+...|..+|..++.+.+. .|+....++||+........... ............
T Consensus 177 sS~~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~~p~ 247 (293)
T 3rih_A 177 SSITGPVTG----YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGE-----EYISGMARSIPM 247 (293)
T ss_dssp CCSBTTTBB----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCH-----HHHHHHHTTSTT
T ss_pred eChhhccCC----CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccH-----HHHHHHHhcCCC
Confidence 43 221111 12345677899988877653 58999999999987754322110 000000001111
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
.-+...+|+|++++.++.+.. --|+.+.+.| +..+
T Consensus 248 ~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG-G~~~ 284 (293)
T 3rih_A 248 GMLGSPVDIGHLAAFLATDEAGYITGQAIVVDG-GQVL 284 (293)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TTTC
T ss_pred CCCCCHHHHHHHHHHHhCccccCCCCCEEEECC-CccC
Confidence 124578999999999887653 2378888885 5544
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.8e-05 Score=60.27 Aligned_cols=137 Identities=16% Similarity=0.094 Sum_probs=77.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v-~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+...++| .
T Consensus 87 ~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~i 166 (301)
T 3tjr_A 87 CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFT 166 (301)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 58999999888775 6899999998642 23345555554 3333123555 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC---C--CCCCceEEEecC
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR---P--FEPHDDVVVYGN 117 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~---~--~~~~~~~~~~~~ 117 (191)
||...... ..+...|..+|..++.+.+. .|+..+.++||+........... . .........++.
T Consensus 167 sS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (301)
T 3tjr_A 167 ASFAGLVP----NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGP 242 (301)
T ss_dssp CCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------
T ss_pred CchhhcCC----CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccc
Confidence 44222111 12345677899888776543 48999999999887654322110 0 001111112222
Q ss_pred CcceeeecchhhHHHHHHHHhcCc
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
......+++.+|+|+.++.++..+
T Consensus 243 ~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 243 LPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp ------CCCHHHHHHHHHHHHHHT
T ss_pred cccccCCCCHHHHHHHHHHHHhcC
Confidence 223356899999999999999875
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=1.8e-06 Score=64.46 Aligned_cols=152 Identities=8% Similarity=0.091 Sum_probs=90.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCc--cEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNI--KRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~v--kr~v 48 (191)
+|++|.+++.++++ +.|+|||+++... +.+..++++++.+.- . .++|
T Consensus 65 ~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv 143 (261)
T 2wyu_A 65 ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLL-REGGGIV 143 (261)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE-EEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHh-ccCCEEE
Confidence 58999999888776 6799999998531 234567777776542 1 2555
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
. |+....... .+...|..+|..++.+.+. .|+.++.++||++........... ............
T Consensus 144 ~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~p 216 (261)
T 2wyu_A 144 TLTYYASEKVV----PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF---TKMYDRVAQTAP 216 (261)
T ss_dssp EEECGGGTSBC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTH---HHHHHHHHHHST
T ss_pred EEecccccCCC----CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcccc---HHHHHHHHhcCC
Confidence 3 442221111 2244677899988877653 489999999998876532211000 000000000000
Q ss_pred eeeecchhhHHHHHHHHhcCccc--CCceeEeecCCCccCHHH
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNIISQLE 161 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~t~~e 161 (191)
...+.+.+|+|++++.++.++.. -++.+.+.| +..++..|
T Consensus 217 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg-G~~~~~~~ 258 (261)
T 2wyu_A 217 LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDA-GYHIMGME 258 (261)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGBC--
T ss_pred CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECC-CccccCCC
Confidence 12356899999999998876432 378888985 55555433
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=7.3e-06 Score=66.65 Aligned_cols=148 Identities=10% Similarity=0.097 Sum_probs=93.0
Q ss_pred CCCCCHHHHHHhhccC------cEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEEc-CCccc
Q 038413 1 GELDEHEKIVSILKEV------DVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFLP-SEFGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~------d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v~-s~~g~ 54 (191)
+|+.|.+++.++++++ |+|||+++... +.+..++.+++++.+ .++||. ||...
T Consensus 286 ~Dv~d~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~ 364 (486)
T 2fr1_A 286 CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFAS 364 (486)
T ss_dssp CCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHH
T ss_pred eCCCCHHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHh
Confidence 5999999999998765 99999998642 345688899998888 888874 44211
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHH---HhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHH
Q 038413 55 EEDRVRPLPPFEAYLEKKRIVRRAI---EAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIA 131 (191)
Q Consensus 55 ~~~~~~~~~~~~~~~~~k~~~e~~l---~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva 131 (191)
.... .....|..+|..++.+. +..|+++++++||.+.+.++.... ..... ......+++.+|++
T Consensus 365 ~~g~----~g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~-------~~~~~--~~~g~~~i~~e~~a 431 (486)
T 2fr1_A 365 AFGA----PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP-------VADRF--RRHGVIEMPPETAC 431 (486)
T ss_dssp HTCC----TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------------C--TTTTEECBCHHHHH
T ss_pred cCCC----CCCHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchh-------HHHHH--HhcCCCCCCHHHHH
Confidence 1111 11235677787766544 447999999999987764322100 00011 11235679999999
Q ss_pred HHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHH
Q 038413 132 KCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQK 169 (191)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~ 169 (191)
+++..++..+.. . +.+. .+.+..+...+...
T Consensus 432 ~~l~~~l~~~~~--~-~~v~----~~d~~~~~~~~~~~ 462 (486)
T 2fr1_A 432 RALQNALDRAEV--C-PIVI----DVRWDRFLLAYTAQ 462 (486)
T ss_dssp HHHHHHHHTTCS--S-CEEC----EECHHHHHHHHTSS
T ss_pred HHHHHHHhCCCC--e-EEEE----eCCHHHHhhhhccc
Confidence 999999987542 2 2232 35677776655443
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.4e-06 Score=63.07 Aligned_cols=147 Identities=11% Similarity=0.090 Sum_probs=89.0
Q ss_pred CCCCCHHHHHHhhc-----cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCcc--EEEc-CCcc
Q 038413 1 GELDEHEKIVSILK-----EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIK--RFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~-----g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vk--r~v~-s~~g 53 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++...- .+ ++|. |+..
T Consensus 51 ~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~~sS~~ 129 (244)
T 4e4y_A 51 ADLTKQQDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL-KVGASIVFNGSDQ 129 (244)
T ss_dssp CCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE-EEEEEEEEECCGG
T ss_pred cCcCCHHHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh-ccCcEEEEECCHH
Confidence 58999999988876 6899999998642 234566777776543 22 4553 4322
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC-----CCC-CceEEEecCCcc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP-----FEP-HDDVVVYGNGEA 120 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~-----~~~-~~~~~~~~~g~~ 120 (191)
.... ..+...|..+|..++.+.+. .|+..+.++||++........... ... ............
T Consensus 130 ~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 205 (244)
T 4e4y_A 130 CFIA----KPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFP 205 (244)
T ss_dssp GTCC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTST
T ss_pred HccC----CCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCC
Confidence 1111 12245677899988877652 589999999999876543221100 000 000000111111
Q ss_pred eeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
...+.+.+|+|++++.++.++.. -++.+.+.|
T Consensus 206 ~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG 239 (244)
T 4e4y_A 206 LNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDG 239 (244)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCcCHHHHHHHHHHHhcCccccccCCeEeECC
Confidence 23467899999999999986542 378888875
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.24 E-value=4.1e-06 Score=62.95 Aligned_cols=150 Identities=13% Similarity=0.130 Sum_probs=87.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------cccHHHHHHHH----HHcCCccEEE-cCC-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------FLDQLKIVHAI----KVAGNIKRFL-PSE-F 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------~~~~~~li~aa----~~~g~vkr~v-~s~-~ 52 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+.-.++| .|+ .
T Consensus 81 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~ 160 (278)
T 3sx2_A 81 ADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA 160 (278)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHH
Confidence 58999999888876 6899999998642 23345555554 3332123555 343 2
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc------CCCCCCceEEEecCCc
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL------RPFEPHDDVVVYGNGE 119 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~------~~~~~~~~~~~~~~g~ 119 (191)
+.... .....+...|..+|..++.+.+. .|+....++||+.......... ............+...
T Consensus 161 ~~~~~-~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (278)
T 3sx2_A 161 GLAGV-GSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAM 239 (278)
T ss_dssp GTSCC-CCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSS
T ss_pred hcCCC-ccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhc
Confidence 32111 10001234577899888877653 4789999999988765332100 0000000001111121
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+..+.+.+|+|++++.++.+.. --++.+.+.|
T Consensus 240 -p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG 273 (278)
T 3sx2_A 240 -PVEVLAPEDVANAVAWLVSDQARYITGVTLPVDA 273 (278)
T ss_dssp -SCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred -CcCcCCHHHHHHHHHHHhCcccccccCCEEeECC
Confidence 2467889999999999887653 2378888875
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.8e-05 Score=59.70 Aligned_cols=146 Identities=8% Similarity=0.018 Sum_probs=80.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC--C-------------------cccHHHHHHHH----HHcCC--ccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP--Q-------------------FLDQLKIVHAI----KVAGN--IKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~--~-------------------~~~~~~li~aa----~~~g~--vkr 46 (191)
+|++|.+++.++++ +.|++||+++.. . +.+..++++++ ++.+. ..+
T Consensus 86 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~ 165 (280)
T 4da9_A 86 ADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRS 165 (280)
T ss_dssp CCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 58999988888775 789999999862 1 12334444443 33220 125
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecC-
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN- 117 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~- 117 (191)
+| .|+....... .+...|..+|..++.+.+. .|+....++||++.......... . .......
T Consensus 166 Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~----~~~~~~~~ 236 (280)
T 4da9_A 166 IINITSVSAVMTS----PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG-K----YDGLIESG 236 (280)
T ss_dssp EEEECCC-----------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------
T ss_pred EEEEcchhhccCC----CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch-h----HHHHHhhc
Confidence 55 3442211111 2245677899988877553 57889999999877654322111 0 0000111
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
......+.+.+|+|++++.++.+.. --++.+.+.| +..
T Consensus 237 ~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG-G~~ 276 (280)
T 4da9_A 237 LVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADG-GLS 276 (280)
T ss_dssp -----CCBCHHHHHHHHHHHHTSTTGGGTTCEEEEST-TCC
T ss_pred CCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECC-Ccc
Confidence 1111346789999999999888754 2378889985 543
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.23 E-value=4.7e-06 Score=62.80 Aligned_cols=147 Identities=8% Similarity=0.098 Sum_probs=88.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH------HcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK------VAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~------~~g~vkr~v 48 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++. +.+ ..++|
T Consensus 80 ~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV 158 (279)
T 3sju_A 80 CDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIV 158 (279)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEE
Confidence 58999998887765 5799999998642 233455666543 355 56766
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-CC-----CCCceEEE
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-PF-----EPHDDVVV 114 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-~~-----~~~~~~~~ 114 (191)
. |+...... ..+...|..+|..++.+.+. .|+....++||++.......... .. ........
T Consensus 159 ~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 234 (279)
T 3sju_A 159 NIASTGGKQG----VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHER 234 (279)
T ss_dssp EECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHH
T ss_pred EECChhhccC----CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHH
Confidence 3 44221111 12245677899988877653 47889999999887653322110 00 00000001
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.........+.+.+|+|++++.++.+.. --|+.+.+.|
T Consensus 235 ~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG 274 (279)
T 3sju_A 235 FNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCG 274 (279)
T ss_dssp HHTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEEST
T ss_pred HHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence 1111112346789999999999888753 2378888875
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.22 E-value=5.6e-06 Score=63.00 Aligned_cols=164 Identities=9% Similarity=0.049 Sum_probs=95.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cccHHHHHHHHHH----cCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FLDQLKIVHAIKV----AGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~~~~~li~aa~~----~g~vkr~v 48 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++.. .+ .++|
T Consensus 85 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV 162 (297)
T 1xhl_A 85 ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIV 162 (297)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEE
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEE
Confidence 58999998888775 6899999998531 1223445555443 33 4666
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCC----CCceEEEec
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFE----PHDDVVVYG 116 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~----~~~~~~~~~ 116 (191)
. |+....... ..+...|..+|..++.+.+. .|+.++.++||++............. .........
T Consensus 163 ~isS~~~~~~~---~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 239 (297)
T 1xhl_A 163 NVSSIVAGPQA---HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRK 239 (297)
T ss_dssp EECCGGGSSSC---CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT
T ss_pred EEcCchhccCC---CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHH
Confidence 3 443221111 01234677889888776542 58999999999887654322100000 000000000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCc-c--cCCceeEeecCCCccCHHHHHHHHHHHh
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDP-R--TCNRIVIYRPQTNIISQLELISLWEQKT 170 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~-~--~~~~~~~i~~~~~~~t~~e~~~~~~~~~ 170 (191)
.......+.+.+|+|++++.++.++ . .-++.+.+.| +..+.+.+++..+.+++
T Consensus 240 ~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdG-G~~~~~~~~~~~~~~~~ 295 (297)
T 1xhl_A 240 ECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADG-GSTLVMGMQTHDLMSVL 295 (297)
T ss_dssp TTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST-TGGGCCGGGGSCHHHHT
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECC-Cccccccccccchhhhh
Confidence 0001124678999999999998765 2 3478889985 67777777666555543
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.22 E-value=4.7e-06 Score=62.34 Aligned_cols=152 Identities=9% Similarity=0.073 Sum_probs=90.4
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-CCcc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP-SEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~-s~~g 53 (191)
+|+.|.+++.++++ +.|++||+++... +.+ .+.++..+++.+ ..++|. |+..
T Consensus 68 ~D~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~ 146 (267)
T 3t4x_A 68 ADLGTEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEA 146 (267)
T ss_dssp CCTTSHHHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGG
T ss_pred cCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchh
Confidence 58899998888775 6899999998642 122 344455566666 667763 4422
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEE-------E---ec
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV-------V---YG 116 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~-------~---~~ 116 (191)
.... ..+...|..+|..++.+.+. .|+....++||.........+........... + ..
T Consensus 147 ~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (267)
T 3t4x_A 147 AIMP----SQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR 222 (267)
T ss_dssp GTSC----CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC
T ss_pred hccC----CCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC
Confidence 1111 12345677899988877653 36778889999877653322110000000000 0 00
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
.......+.+.+|+|++++.++.+.. . -|+.+.+.| +...|
T Consensus 223 ~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG-G~~~s 265 (267)
T 3t4x_A 223 PTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDG-GLVRS 265 (267)
T ss_dssp TTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST-TCSCS
T ss_pred CcccccCccCHHHHHHHHHHHcCccccCccCCeEEECC-Ccccc
Confidence 00112357889999999999887643 2 378889985 55443
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.3e-05 Score=60.50 Aligned_cols=147 Identities=14% Similarity=0.161 Sum_probs=89.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccEEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr~v~-s~ 51 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++.+. + ..++|. |+
T Consensus 86 ~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS 164 (283)
T 1g0o_A 86 ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGS 164 (283)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEec
Confidence 58889888877664 6899999998542 23456777887765 4 567663 44
Q ss_pred -cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC---CCC---CCceEEEecC
Q 038413 52 -FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR---PFE---PHDDVVVYGN 117 (191)
Q Consensus 52 -~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~---~~~---~~~~~~~~~~ 117 (191)
.+... . ..+...|..+|..++.+.+. .|+.++.++||++.......... ... .......+..
T Consensus 165 ~~~~~~-~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T 1g0o_A 165 ITGQAK-A---VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAA 240 (283)
T ss_dssp GGGTCS-S---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHH
T ss_pred hhhccC-C---CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHh
Confidence 22211 1 01245677899888877653 58999999999987754322100 000 0000000000
Q ss_pred --CcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 118 --GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 118 --g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
......+.+.+|+|++++.++.++. .-++.+.+.|
T Consensus 241 ~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdg 279 (283)
T 1g0o_A 241 VQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG 279 (283)
T ss_dssp HHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence 1111236789999999999988653 2378888874
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.8e-06 Score=61.85 Aligned_cols=150 Identities=7% Similarity=-0.036 Sum_probs=89.4
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC--------------------cccHHHHHHHHHHcCCcc--EEE-cCCccc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAGNIK--RFL-PSEFGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g~vk--r~v-~s~~g~ 54 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++...- .+ ++| .|+...
T Consensus 42 ~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~-~~~g~iv~~sS~~~ 120 (223)
T 3uce_A 42 LDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYL-KQGGSITLTSGMLS 120 (223)
T ss_dssp CCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGE-EEEEEEEEECCGGG
T ss_pred cCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhc-cCCeEEEEecchhh
Confidence 58999999988875 6899999998541 233456677776542 22 455 344221
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhh
Q 038413 55 EEDRVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEED 129 (191)
Q Consensus 55 ~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~D 129 (191)
... ..+...|..+|..++.+.+. ..+....++||+............. ................+.+.+|
T Consensus 121 ~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 195 (223)
T 3uce_A 121 RKV----VANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADD-RDAMYQRTQSHLPVGKVGEASD 195 (223)
T ss_dssp TSC----CTTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHH-HHHHHHHHHHHSTTCSCBCHHH
T ss_pred ccC----CCCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhh-HHHHHHHHhhcCCCCCccCHHH
Confidence 111 12345677899988877653 2378888999987765332211000 0000000000111134678999
Q ss_pred HHHHHHHHhcCcccCCceeEeecCCCcc
Q 038413 130 IAKCTIKVINDPRTCNRIVIYRPQTNII 157 (191)
Q Consensus 130 va~~~~~~l~~~~~~~~~~~i~~~~~~~ 157 (191)
+|++++.++.++..-++.+.+.| +..+
T Consensus 196 vA~~~~~l~~~~~~tG~~i~vdg-G~~~ 222 (223)
T 3uce_A 196 IAMAYLFAIQNSYMTGTVIDVDG-GALL 222 (223)
T ss_dssp HHHHHHHHHHCTTCCSCEEEEST-TGGG
T ss_pred HHHHHHHHccCCCCCCcEEEecC-Ceec
Confidence 99999999886544588899985 5544
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.20 E-value=4.9e-05 Score=57.02 Aligned_cols=142 Identities=13% Similarity=0.088 Sum_probs=83.0
Q ss_pred CCCCCHHHHHHhhcc-------CcEEEEccCCCC--------------------ccc----HHHHHHHHHHcCCcc-EEE
Q 038413 1 GELDEHEKIVSILKE-------VDVVISTVAYPQ--------------------FLD----QLKIVHAIKVAGNIK-RFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------~d~V~~~~~~~~--------------------~~~----~~~li~aa~~~g~vk-r~v 48 (191)
+|+.|.+++.++++. .|++||+++... +.+ .+.++..+++.+ .. ++|
T Consensus 76 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV 154 (272)
T 2nwq_A 76 LDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIV 154 (272)
T ss_dssp CCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEE
Confidence 589999999888764 499999998531 112 344555666666 66 776
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
. |+...... ..+...|..+|..++.+.+. .|+.++.++||++............ ........ .
T Consensus 155 ~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~-~~~~~~~~----~ 225 (272)
T 2nwq_A 155 NLGSVAGKWP----YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGD-QARYDKTY----A 225 (272)
T ss_dssp EECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-------------------------
T ss_pred EeCCchhccC----CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccc-hHHHHHhh----c
Confidence 3 44221111 12245677899988887653 4789999999988765322110000 00000000 0
Q ss_pred eeeecchhhHHHHHHHHhcCccc-CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRT-CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~-~~~~~~i~~ 152 (191)
...+++.+|+|++++.++.++.. .++.+.+.+
T Consensus 226 ~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~ 258 (272)
T 2nwq_A 226 GAHPIQPEDIAETIFWIMNQPAHLNINSLEIMP 258 (272)
T ss_dssp CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred cCCCCCHHHHHHHHHHHhCCCccCccceEEEee
Confidence 12347899999999999987643 356666664
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.20 E-value=8.6e-06 Score=60.91 Aligned_cols=148 Identities=11% Similarity=0.068 Sum_probs=85.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+.-.++|.
T Consensus 77 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~i 156 (266)
T 4egf_A 77 IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITV 156 (266)
T ss_dssp CCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 58999888877765 7899999998642 12334444444 33331135553
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+...... ..+...|..+|..++.+.+. .|+....++||+............ ..............
T Consensus 157 sS~~~~~~----~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~ 229 (266)
T 4egf_A 157 ASAAALAP----LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD---EAKSAPMIARIPLG 229 (266)
T ss_dssp CCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS---HHHHHHHHTTCTTS
T ss_pred cchhhccC----CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC---hHHHHHHHhcCCCC
Confidence 44221111 12345677899888876543 488999999998876532221100 00000000111112
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCc
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNI 156 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~ 156 (191)
.+.+.+|+|++++.++.+.. . -++.+.+.| +..
T Consensus 230 r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG-G~~ 264 (266)
T 4egf_A 230 RFAVPHEVSDAVVWLASDAASMINGVDIPVDG-GYT 264 (266)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGG
T ss_pred CCcCHHHHHHHHHHHhCchhcCccCcEEEECC-Ccc
Confidence 35679999999999887643 2 378888885 544
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.20 E-value=4e-06 Score=62.81 Aligned_cols=133 Identities=11% Similarity=0.165 Sum_probs=81.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHH----HHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLK----IVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~----li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..+ ++..+++.+ ..++|.
T Consensus 66 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~i 144 (266)
T 3p19_A 66 VDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINI 144 (266)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence 58999998888775 6899999998642 122333 455556666 677773
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecC-Ccce
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN-GEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~ 121 (191)
||...... ..+...|..+|..++.+.+. .|+..+.++||++.......... ......... ....
T Consensus 145 sS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~~ 216 (266)
T 3p19_A 145 SSIAGKKT----FPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS----QQIKDGYDAWRVDM 216 (266)
T ss_dssp CCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC----HHHHHHHHHHHHHT
T ss_pred cChhhCCC----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc----hhhhHHHHhhcccc
Confidence 44221111 12245677899888766542 58999999999887654332110 000000000 0001
Q ss_pred eeecchhhHHHHHHHHhcCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~ 142 (191)
..+++.+|||++++.++.++.
T Consensus 217 ~r~~~pedvA~av~~l~~~~~ 237 (266)
T 3p19_A 217 GGVLAADDVARAVLFAYQQPQ 237 (266)
T ss_dssp TCCBCHHHHHHHHHHHHHSCT
T ss_pred cCCCCHHHHHHHHHHHHcCCC
Confidence 236789999999999999875
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.19 E-value=6.1e-06 Score=61.66 Aligned_cols=149 Identities=11% Similarity=0.109 Sum_probs=87.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHH----HcCCccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIK----VAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~----~~g~vkr~v- 48 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++. +.+ .++|
T Consensus 67 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~ 144 (264)
T 3ucx_A 67 TDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVN 144 (264)
T ss_dssp CCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEE
Confidence 58999999888775 6799999997531 123344555443 333 2555
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-----CCCC-CceEEEe
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-----PFEP-HDDVVVY 115 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-----~~~~-~~~~~~~ 115 (191)
.|+...... ..+...|..+|..++.+.+. .|+....++||+........... .... .......
T Consensus 145 isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (264)
T 3ucx_A 145 VNSMVVRHS----QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAA 220 (264)
T ss_dssp ECCGGGGCC----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ECcchhccC----CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHH
Confidence 344221111 12245677899888876542 58999999999987643222110 0000 0000111
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
..+.....+.+.+|+|++++.++.+.. --++.+.+.| +..
T Consensus 221 ~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG-G~~ 262 (264)
T 3ucx_A 221 AAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNC-GEY 262 (264)
T ss_dssp HTTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEEST-TSS
T ss_pred hccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECC-Ccc
Confidence 122222346789999999999887643 2378888885 553
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=9e-05 Score=54.76 Aligned_cols=140 Identities=14% Similarity=0.110 Sum_probs=81.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHH----HHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHA----IKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~a----a~~~g~vkr~v~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..+++++ +++.+ ..++|.
T Consensus 53 ~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~ 131 (248)
T 3asu_A 53 LDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIIN 131 (248)
T ss_dssp CCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEE
Confidence 58999999988875 6899999998531 1223334444 44566 667763
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccc-ccccccccCCCCCCceE-EEecCCc
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYG-AYFVNVLLRPFEPHDDV-VVYGNGE 119 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~-~~~~~~~~~~~~~~~~~-~~~~~g~ 119 (191)
||...... ..+...|..+|..++.+.+. .|+..+.++||++. ......... . ..... ...
T Consensus 132 isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~-~-~~~~~~~~~---- 201 (248)
T 3asu_A 132 IGSTAGSWP----YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFK-G-DDGKAEKTY---- 201 (248)
T ss_dssp ECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------
T ss_pred EccchhccC----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhccc-C-chHHHHHHH----
Confidence 44221111 12245677899988877653 47999999999887 443211000 0 00000 000
Q ss_pred ceeeecchhhHHHHHHHHhcCccc-CCceeEee
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPRT-CNRIVIYR 151 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~~-~~~~~~i~ 151 (191)
....+.+.+|+|++++.++.++.. .++.+.+.
T Consensus 202 ~~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~ 234 (248)
T 3asu_A 202 QNTVALTPEDVSEAVWWVSTLPAHVNINTLEMM 234 (248)
T ss_dssp ---CCBCHHHHHHHHHHHHHSCTTCCCCEEEEC
T ss_pred hccCCCCHHHHHHHHHHHhcCCccceeeEEEEc
Confidence 112346899999999999987643 35667766
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.18 E-value=2.2e-05 Score=58.87 Aligned_cols=141 Identities=10% Similarity=0.069 Sum_probs=86.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccEEE-cCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKRFL-PSE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr~v-~s~ 51 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++... + -.++| .|+
T Consensus 88 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-~g~iv~isS 166 (271)
T 3v2g_A 88 ADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-GGRIITIGS 166 (271)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-TCEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCEEEEEeC
Confidence 58999998888776 7899999998642 23445667776654 2 23555 333
Q ss_pred -cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 52 -FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 52 -~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
.+.... ..+...|..+|..++.+.+. .|+....++||+........... .. ...........
T Consensus 167 ~~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~--~~----~~~~~~~~~~r 236 (271)
T 3v2g_A 167 NLAELVP----WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD--HA----EAQRERIATGS 236 (271)
T ss_dssp GGGTCCC----STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS--SH----HHHHHTCTTSS
T ss_pred hhhccCC----CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch--hH----HHHHhcCCCCC
Confidence 332110 12345677899988877543 48999999999877643221100 00 00000001123
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+...+|+|++++.++.+.. --++.+.+.|
T Consensus 237 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdG 267 (271)
T 3v2g_A 237 YGEPQDIAGLVAWLAGPQGKFVTGASLTIDG 267 (271)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCHHHHHHHHHHHhCcccCCccCCEEEeCc
Confidence 5679999999998887643 2378888875
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.18 E-value=2.3e-05 Score=58.94 Aligned_cols=145 Identities=11% Similarity=0.081 Sum_probs=86.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++ ++.+.-.++| .
T Consensus 84 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i 163 (280)
T 3pgx_A 84 LDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVV 163 (280)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 58999998888775 6899999998642 22344455554 4432123555 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccc------cc-CCCCCCceEEEe
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNV------LL-RPFEPHDDVVVY 115 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~------~~-~~~~~~~~~~~~ 115 (191)
|+...... ......|..+|..++.+.+. .|+....++||+........ +. ..... ..+...
T Consensus 164 sS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~ 238 (280)
T 3pgx_A 164 SSSAGLKA----TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFV-HSFPPM 238 (280)
T ss_dssp CCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGG-GGSCCB
T ss_pred cchhhccC----CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhh-hhhhhc
Confidence 44221111 12245677899888876543 58999999999887653321 00 00000 000111
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
...+..+.+.+|+|++++.++.++. --++.+.+.|
T Consensus 239 --~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 275 (280)
T 3pgx_A 239 --PVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDK 275 (280)
T ss_dssp --TTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEEST
T ss_pred --ccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 1111237899999999999887654 2378888874
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.18 E-value=3e-05 Score=56.87 Aligned_cols=131 Identities=11% Similarity=0.030 Sum_probs=75.1
Q ss_pred CCCCCHHHHHHhhc---------cCcEEEEccCCCC--------------------cccHHHHHHHHH----Hc------
Q 038413 1 GELDEHEKIVSILK---------EVDVVISTVAYPQ--------------------FLDQLKIVHAIK----VA------ 41 (191)
Q Consensus 1 gD~~d~~~l~~a~~---------g~d~V~~~~~~~~--------------------~~~~~~li~aa~----~~------ 41 (191)
+|++|.+++.++++ ++|+|||+++... +.+..++++++. +.
T Consensus 58 ~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~ 137 (250)
T 1yo6_A 58 LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESG 137 (250)
T ss_dssp CCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCS
T ss_pred eecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCC
Confidence 58999999888876 7999999997532 122344444443 22
Q ss_pred CC----ccEEE-cCC-cccCCC--CCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCC
Q 038413 42 GN----IKRFL-PSE-FGCEED--RVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPF 106 (191)
Q Consensus 42 g~----vkr~v-~s~-~g~~~~--~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~ 106 (191)
+. ..++| .|+ .+.... ......+...|..+|..++.+++. .|+..+.++||++......
T Consensus 138 ~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------ 211 (250)
T 1yo6_A 138 DQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG------ 211 (250)
T ss_dssp SCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------
T ss_pred CcccCCCcEEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC------
Confidence 20 24655 343 222111 000012345677899988877653 3799999999976553210
Q ss_pred CCCceEEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 107 EPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
...+++.+|+|+.++.++.++. ..++.+.+.
T Consensus 212 --------------~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~ 244 (250)
T 1yo6_A 212 --------------KNAALTVEQSTAELISSFNKLDNSHNGRFFMRN 244 (250)
T ss_dssp ---------------------HHHHHHHHHHHTTCCGGGTTCEEETT
T ss_pred --------------CCCCCCHHHHHHHHHHHHhcccccCCCeEEEEC
Confidence 0145789999999999998754 235555554
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=6.6e-06 Score=60.97 Aligned_cols=144 Identities=12% Similarity=0.020 Sum_probs=84.7
Q ss_pred CCCCCH-HHHHHhhc-------cCcEEEEccCCCC-----------cccHHHHHHHHHHcC------CccEEE-cCCccc
Q 038413 1 GELDEH-EKIVSILK-------EVDVVISTVAYPQ-----------FLDQLKIVHAIKVAG------NIKRFL-PSEFGC 54 (191)
Q Consensus 1 gD~~d~-~~l~~a~~-------g~d~V~~~~~~~~-----------~~~~~~li~aa~~~g------~vkr~v-~s~~g~ 54 (191)
+|+.|. +++.++++ +.|+|||+++... +.+..++++++...- .-.++| .||...
T Consensus 62 ~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~ 141 (254)
T 1sby_A 62 YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG 141 (254)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred EecCCChHHHHHHHHHHHHhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh
Confidence 588887 77777665 7899999998643 344566666665321 013555 344222
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecch
Q 038413 55 EEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 55 ~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
... ..+...|..+|..++.+.+. .|+.++.++||++..................... ....++.+.
T Consensus 142 ~~~----~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 214 (254)
T 1sby_A 142 FNA----IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL---LLSHPTQTS 214 (254)
T ss_dssp TSC----CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHH---HTTSCCEEH
T ss_pred ccC----CCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHH---HhcCCCCCH
Confidence 111 12245677899988877653 5899999999988765432211000000000000 011234589
Q ss_pred hhHHHHHHHHhcCcccCCceeEeec
Q 038413 128 EDIAKCTIKVINDPRTCNRIVIYRP 152 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~~~~~~~~i~~ 152 (191)
+|+|+.++.++... ..++.+.+.|
T Consensus 215 ~dvA~~i~~~~~~~-~~G~~~~v~g 238 (254)
T 1sby_A 215 EQCGQNFVKAIEAN-KNGAIWKLDL 238 (254)
T ss_dssp HHHHHHHHHHHHHC-CTTCEEEEET
T ss_pred HHHHHHHHHHHHcC-CCCCEEEEeC
Confidence 99999999888643 3478888885
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=98.17 E-value=1.6e-05 Score=59.83 Aligned_cols=142 Identities=11% Similarity=0.113 Sum_probs=85.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCc-cEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNI-KRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~v-kr~v~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ . .++|.
T Consensus 88 ~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~~g~iv~ 166 (276)
T 3r1i_A 88 CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQG-LGGTIIT 166 (276)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcEEEE
Confidence 58999999888876 7899999998642 12334444444 3443 2 35553
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+..... ..+...|..+|..++.+.+. .|+....++||++........... ...+.....
T Consensus 167 isS~~~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~------~~~~~~~~p 237 (276)
T 3r1i_A 167 TASMSGHIINI---PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY------HALWEPKIP 237 (276)
T ss_dssp ECCGGGTSCCC---SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG------HHHHGGGST
T ss_pred ECchHhcccCC---CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH------HHHHHhcCC
Confidence 33 3321111 11345678899888877653 578899999998776533221100 000000111
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
...+.+.+|+|++++.++.+.. . -++.+.+.|
T Consensus 238 ~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG 271 (276)
T 3r1i_A 238 LGRMGRPEELTGLYLYLASAASSYMTGSDIVIDG 271 (276)
T ss_dssp TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCcCHHHHHHHHHHHcCccccCccCcEEEECc
Confidence 1235689999999999888643 2 378888875
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.16 E-value=4.2e-05 Score=57.18 Aligned_cols=147 Identities=14% Similarity=0.241 Sum_probs=78.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHH----HHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQL----KIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~----~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+.. .++..+++.+ ..++|.
T Consensus 60 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~i 138 (264)
T 3tfo_A 60 LDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINI 138 (264)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEE
Confidence 58999998887765 6899999998642 12223 3444455556 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
||...... ......|..+|..++.+.+. .|+....++||++........... ....... .....+
T Consensus 139 sS~~~~~~----~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~----~~~~~~~--~~~~~~ 208 (264)
T 3tfo_A 139 GSIGALSV----VPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHE----ETMAAMD--TYRAIA 208 (264)
T ss_dssp CCGGGTCC----CTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-----------------------------C
T ss_pred cCHHHccc----CCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccch----hHHHHHH--hhhccC
Confidence 44221111 12244677899888776543 278888899998766432221110 0000000 011224
Q ss_pred cchhhHHHHHHHHhcCccc-CCceeEeecCCCccC
Q 038413 125 NYEEDIAKCTIKVINDPRT-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~~-~~~~~~i~~~~~~~t 158 (191)
.+.+|+|++++.++.++.. ....+.+.++++.+.
T Consensus 209 ~~pedvA~~v~~l~s~~~~~~~~~i~i~p~~~~~~ 243 (264)
T 3tfo_A 209 LQPADIARAVRQVIEAPQSVDTTEITIRPTASGNA 243 (264)
T ss_dssp CCHHHHHHHHHHHHHSCTTEEEEEEEEEECC----
T ss_pred CCHHHHHHHHHHHhcCCccCccceEEEecCccccc
Confidence 6899999999999998753 234444442244433
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.15 E-value=6.4e-06 Score=61.76 Aligned_cols=122 Identities=13% Similarity=0.117 Sum_probs=78.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+ .+.++..+++.+ ..++|.
T Consensus 87 ~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~i 165 (272)
T 1yb1_A 87 VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTV 165 (272)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred eeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 58999998888775 6899999998542 122 234455556677 778774
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh----------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA----------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~----------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||+....... . . ..
T Consensus 166 sS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~-------~-~-------~~ 226 (272)
T 1yb1_A 166 ASAAGHVS----VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK-------N-P-------ST 226 (272)
T ss_dssp CCCC-CCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT-------C-T-------HH
T ss_pred echhhcCC----CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc-------c-c-------cc
Confidence 44221110 01234567789888776542 3788999999976654211 0 0 01
Q ss_pred ceeeecchhhHHHHHHHHhcCcc
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
....+++.+|+|++++.++.++.
T Consensus 227 ~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 227 SLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred cccCCCCHHHHHHHHHHHHHcCC
Confidence 12356889999999999998753
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=6.7e-06 Score=61.46 Aligned_cols=140 Identities=11% Similarity=0.065 Sum_probs=85.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH-----HcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK-----VAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~-----~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++. +.+ ..++|.
T Consensus 83 ~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~ 161 (267)
T 4iiu_A 83 FDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIIT 161 (267)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEE
Confidence 58999999888775 6899999998642 233455666653 444 456663
Q ss_pred -CCc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+. +... . .+...|..+|..++.+.+. .|+....++||+........... ..........
T Consensus 162 isS~~~~~~-~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~p 230 (267)
T 4iiu_A 162 LSSVSGVMG-N----RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEES------ALKEAMSMIP 230 (267)
T ss_dssp ECCHHHHHC-C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHH------HHHHHHHTCT
T ss_pred EcchHhccC-C----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHH------HHHHHHhcCC
Confidence 442 2111 0 2345677889877766542 48899999999877643221100 0000000111
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
...+.+.+|+|+++..++.++. .-++.+.+.|
T Consensus 231 ~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdG 264 (267)
T 4iiu_A 231 MKRMGQAEEVAGLASYLMSDIAGYVTRQVISING 264 (267)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCC
Confidence 1236789999999999888643 2378888874
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.15 E-value=2.3e-05 Score=58.43 Aligned_cols=144 Identities=9% Similarity=0.068 Sum_probs=84.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ ..|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~i 158 (267)
T 3gdg_A 80 CQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVIT 158 (267)
T ss_dssp CCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEE
Confidence 58999998888775 4699999998642 12334445544 5555 556663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh----c--CCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA----V--EIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~----~--~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
|+........ ..+...|..+|..++.+.+. . .+....+.||++......... ......+........
T Consensus 159 sS~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~r 231 (267)
T 3gdg_A 159 ASMSGHIANF--PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP-----KETQQLWHSMIPMGR 231 (267)
T ss_dssp CCGGGTSCCS--SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC-----HHHHHHHHTTSTTSS
T ss_pred ccccccccCC--CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC-----HHHHHHHHhcCCCCC
Confidence 4322111110 01345677899988877653 1 366777899987654322110 000011111212234
Q ss_pred ecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 124 FNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
+.+.+|+|++++.++.+.. --++.+.+.|
T Consensus 232 ~~~~~dva~~~~~l~s~~~~~itG~~i~vdg 262 (267)
T 3gdg_A 232 DGLAKELKGAYVYFASDASTYTTGADLLIDG 262 (267)
T ss_dssp CEETHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred CcCHHHHHhHhheeecCccccccCCEEEECC
Confidence 5678999999999887643 2378888875
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=5.2e-06 Score=62.02 Aligned_cols=149 Identities=11% Similarity=0.076 Sum_probs=88.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------------cccHHHHHHHHHHcCCc--cEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------------FLDQLKIVHAIKVAGNI--KRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------------~~~~~~li~aa~~~g~v--kr~ 47 (191)
+|++|.+++.++++ +.|+|||+++... +.+..++++++...- . .++
T Consensus 66 ~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~i 144 (265)
T 1qsg_A 66 CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML-NPGSAL 144 (265)
T ss_dssp CCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHh-ccCCEE
Confidence 58999999888775 6799999998532 123456777776642 2 255
Q ss_pred Ec-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 LP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|. |+....... .+...|..+|..++.+.+. .|+.++.++||++........... ...........
T Consensus 145 v~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~ 217 (265)
T 1qsg_A 145 LTLSYLGAERAI----PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF---RKMLAHCEAVT 217 (265)
T ss_dssp EEEECGGGTSBC----TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH---HHHHHHHHHHS
T ss_pred EEEcchhhccCC----CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccccc---HHHHHHHHhcC
Confidence 53 432211111 1234677899988877653 378999999998876532211000 00000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccC
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
....+.+.+|+|++++.++.++. . -++.+.+.| +..++
T Consensus 218 p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg-G~~~~ 257 (265)
T 1qsg_A 218 PIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG-GFSIA 257 (265)
T ss_dssp TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST-TGGGB
T ss_pred CCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECC-CcCCC
Confidence 01235789999999999987643 2 368888885 55443
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.15 E-value=5.3e-05 Score=56.11 Aligned_cols=140 Identities=11% Similarity=0.081 Sum_probs=83.7
Q ss_pred CCC--CCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHH----HHcCCccEE
Q 038413 1 GEL--DEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAI----KVAGNIKRF 47 (191)
Q Consensus 1 gD~--~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa----~~~g~vkr~ 47 (191)
+|+ .|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++
T Consensus 69 ~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~i 147 (252)
T 3f1l_A 69 LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSL 147 (252)
T ss_dssp CCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEE
T ss_pred EecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEE
Confidence 467 78887777664 6899999998631 12344455555 5566 5676
Q ss_pred Ec-CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh----c--CCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 LP-SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA----V--EIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v~-s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~----~--~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|. |+ .+.. . ..+...|..+|..++.+.+. . .+....+.||++.......... ..
T Consensus 148 v~isS~~~~~-~----~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~~-------------~~ 209 (252)
T 3f1l_A 148 VFTSSSVGRQ-G----RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFP-------------TE 209 (252)
T ss_dssp EEECCGGGTS-C----CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHCT-------------TC
T ss_pred EEECChhhcc-C----CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhCC-------------cc
Confidence 63 44 2221 1 12345677899988877653 1 3677888999876643222111 01
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHH
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQL 160 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~ 160 (191)
.+..+.+.+|+|++++.++.++. --++.+.+.| +...++.
T Consensus 210 ~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdg-G~~~~~~ 251 (252)
T 3f1l_A 210 DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQP-GRKPGIS 251 (252)
T ss_dssp CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSC-C------
T ss_pred chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCC-CcCCCCC
Confidence 11235678999999999988753 2378888885 6666554
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=1.3e-06 Score=65.83 Aligned_cols=148 Identities=7% Similarity=0.029 Sum_probs=87.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 84 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~i 162 (277)
T 4fc7_A 84 MDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNI 162 (277)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 58999998887775 6899999998432 23345556655 3344 346653
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccc-ccccCCCCCCceEEEecCCcc
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFV-NVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+.... .....|..+|..++.+.+. .|+....++||++..... ...... ............
T Consensus 163 sS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~p 234 (277)
T 4fc7_A 163 TATLGNRGQ-----ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGP---QASLSTKVTASP 234 (277)
T ss_dssp CCSHHHHTC-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCC---HHHHHHHHHTST
T ss_pred CchhhCCCC-----CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCC---HHHHHHHhccCC
Confidence 43 222110 1234677889888876553 478999999998875321 111000 000000000111
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccC
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIIS 158 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t 158 (191)
...+.+.+|+|++++.++.+.. --|+.+.+.| +..++
T Consensus 235 ~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdG-G~~~~ 273 (277)
T 4fc7_A 235 LQRLGNKTEIAHSVLYLASPLASYVTGAVLVADG-GAWLT 273 (277)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-THHHH
T ss_pred CCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECC-CcccC
Confidence 1235689999999999988643 2378888885 55544
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.14 E-value=2.6e-06 Score=63.95 Aligned_cols=158 Identities=8% Similarity=0.055 Sum_probs=89.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHH---cCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKV---AGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~---~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++.. .+ ..++| .
T Consensus 61 ~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~i 139 (270)
T 1yde_A 61 CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINI 139 (270)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEE
Confidence 58999999888775 6899999998531 1234455555542 12 24665 3
Q ss_pred CCc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCC-ceEEEecCCcc
Q 038413 50 SEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPH-DDVVVYGNGEA 120 (191)
Q Consensus 50 s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~ 120 (191)
|+. +... . .....|..+|..++.+.+. .|+.++.++||++.+............. ..+........
T Consensus 140 sS~~~~~~-~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p 214 (270)
T 1yde_A 140 SSLVGAIG-Q----AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP 214 (270)
T ss_dssp CCHHHHHC-C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST
T ss_pred cCccccCC-C----CCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC
Confidence 442 2211 0 1244677899888877653 5899999999998876432211100000 00000000000
Q ss_pred eeeecchhhHHHHHHHHhcCccc-CCceeEeecCCCccCHHHHHHH
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRT-CNRIVIYRPQTNIISQLELISL 165 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~-~~~~~~i~~~~~~~t~~e~~~~ 165 (191)
...+...+|+|++++.++.+... -++.+.+.| +..+.+......
T Consensus 215 ~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdG-G~~~~~~~~~~~ 259 (270)
T 1yde_A 215 LGRMGQPAEVGAAAVFLASEANFCTGIELLVTG-GAELGYGCKASR 259 (270)
T ss_dssp TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEEST-TTTSCC------
T ss_pred CCCCcCHHHHHHHHHHHcccCCCcCCCEEEECC-CeecccCcCccc
Confidence 11256899999999988875333 378899985 676766555443
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=1.8e-05 Score=59.39 Aligned_cols=141 Identities=13% Similarity=0.070 Sum_probs=84.0
Q ss_pred CCCCCH----HHHHHhhc-------cCcEEEEccCCCC------------------------------cccHHHHHHHHH
Q 038413 1 GELDEH----EKIVSILK-------EVDVVISTVAYPQ------------------------------FLDQLKIVHAIK 39 (191)
Q Consensus 1 gD~~d~----~~l~~a~~-------g~d~V~~~~~~~~------------------------------~~~~~~li~aa~ 39 (191)
+|+.|. +++.++++ +.|++||+++... +.+..++++++.
T Consensus 69 ~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 148 (276)
T 1mxh_A 69 GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFA 148 (276)
T ss_dssp CCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHH
Confidence 588888 88877765 6899999998531 112345667766
Q ss_pred H---cCCc------cEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccc
Q 038413 40 V---AGNI------KRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVL 102 (191)
Q Consensus 40 ~---~g~v------kr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~ 102 (191)
. .+ . .++|. |+...... ..+...|..+|..++.+.+. .|+.++.++||++..+ ...
T Consensus 149 ~~~~~~-~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~ 221 (276)
T 1mxh_A 149 RRQGEG-GAWRSRNLSVVNLCDAMTDLP----LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAM 221 (276)
T ss_dssp HTC--------CCCEEEEEECCGGGGSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSS
T ss_pred HHHhcC-CCCCCCCcEEEEECchhhcCC----CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccC
Confidence 5 33 3 57663 44221111 12345677899888876543 4899999999988765 110
Q ss_pred cCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 103 LRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 103 ~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
...... . +.......+++.+.+|+|++++.++.++.. -++.+.+.|
T Consensus 222 -~~~~~~-~--~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg 269 (276)
T 1mxh_A 222 -PQETQE-E--YRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDG 269 (276)
T ss_dssp -CHHHHH-H--HHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CHHHHH-H--HHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 000000 0 000000112378899999999999876432 378888874
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.11 E-value=3.3e-06 Score=62.81 Aligned_cols=147 Identities=8% Similarity=0.144 Sum_probs=85.2
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHc----------
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVA---------- 41 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~---------- 41 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++...
T Consensus 59 ~D~~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~ 138 (257)
T 3tl3_A 59 ADVTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPN 138 (257)
T ss_dssp CCTTCHHHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--C
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccc
Confidence 58999999888876 7899999998531 12334555555432
Q ss_pred --CCccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCce
Q 038413 42 --GNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDD 111 (191)
Q Consensus 42 --g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~ 111 (191)
+ -.++|. |+....... .+...|..+|..++.+.+. .|+....++||++......... ...
T Consensus 139 ~~~-~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-----~~~ 208 (257)
T 3tl3_A 139 AEE-RGVIINTASVAAFDGQ----IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP-----EEA 208 (257)
T ss_dssp CCC-SEEEEEECCCC--CCH----HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C-----HHH
T ss_pred cCC-CcEEEEEcchhhcCCC----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc-----HHH
Confidence 2 235553 432211100 1234567889888776543 5788999999987664322210 000
Q ss_pred EEEecCCcc-eeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccC
Q 038413 112 VVVYGNGEA-KAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIIS 158 (191)
Q Consensus 112 ~~~~~~g~~-~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t 158 (191)
......... ...+.+.+|+|++++.++.++..-++.+.+.| +..++
T Consensus 209 ~~~~~~~~~~~~r~~~p~dva~~v~~l~s~~~itG~~i~vdG-G~~~~ 255 (257)
T 3tl3_A 209 RASLGKQVPHPSRLGNPDEYGALAVHIIENPMLNGEVIRLDG-AIRMA 255 (257)
T ss_dssp HHHHHHTSSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST-TC---
T ss_pred HHHHHhcCCCCCCccCHHHHHHHHHHHhcCCCCCCCEEEECC-CccCC
Confidence 000000101 13467899999999999987544588899985 55443
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.10 E-value=1.8e-05 Score=60.75 Aligned_cols=138 Identities=12% Similarity=0.004 Sum_probs=74.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC---------Ccc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG---------NIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g---------~vk 45 (191)
+|++|.+++.++++ +.|+|||+++... +.+..++++++.... .-.
T Consensus 66 ~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g 145 (319)
T 3ioy_A 66 LDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGG 145 (319)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCc
Confidence 58999999888875 5699999998531 234555666555432 023
Q ss_pred EEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccC-C-CCCCceEEE-
Q 038413 46 RFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLR-P-FEPHDDVVV- 114 (191)
Q Consensus 46 r~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~-~-~~~~~~~~~- 114 (191)
++|. ||....... .....|..+|..++.+.+ ..|+..+.++||++...+...... . .+.......
T Consensus 146 ~iV~isS~a~~~~~----~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 221 (319)
T 3ioy_A 146 HVVNTASMAAFLAA----GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVD 221 (319)
T ss_dssp EEEEECCGGGTCCC----SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----------------------
T ss_pred EEEEecccccccCC----CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchh
Confidence 5663 443221111 123467789987665543 258999999999887654322110 0 000000000
Q ss_pred ---ecC-CcceeeecchhhHHHHHHHHhcCcc
Q 038413 115 ---YGN-GEAKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 115 ---~~~-g~~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
... .......++.+|+|+.++.+++.++
T Consensus 222 ~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 222 KTAVERLAGVHEFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp -------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence 000 0000112789999999999998863
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.09 E-value=3e-05 Score=57.49 Aligned_cols=130 Identities=10% Similarity=0.083 Sum_probs=71.0
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------cccHHH----HHHHHHHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLDQLK----IVHAIKVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~~~~----li~aa~~~g~vkr~v~-s 50 (191)
+|++|.+++.++++ +.|++||+++... +.+..+ ++..+++.+ ..++|. |
T Consensus 63 ~Dv~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~is 141 (252)
T 3h7a_A 63 LDARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTG 141 (252)
T ss_dssp CCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEE
T ss_pred CcCCCHHHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEC
Confidence 58999999988886 5799999998632 122333 444455666 557663 3
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCe-EEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPY-TFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~-tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
| .+... ......|..+|..++.+.+. .|+.. ..+.||++.......... .......... +
T Consensus 142 S~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~-----~~~~~~~~~~-~ 210 (252)
T 3h7a_A 142 ATASLRG-----GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE-----QMFGKDALAN-P 210 (252)
T ss_dssp EGGGTCC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------
T ss_pred CHHHcCC-----CCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch-----hhhhhhhhcC-C
Confidence 3 22211 12245677899888876543 47888 789999876643322110 0001111111 2
Q ss_pred eeecchhhHHHHHHHHhcCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~ 142 (191)
..+.+.+|+|++++.++.++.
T Consensus 211 ~~~~~pedvA~~~~~l~s~~~ 231 (252)
T 3h7a_A 211 DLLMPPAAVAGAYWQLYQQPK 231 (252)
T ss_dssp ---CCHHHHHHHHHHHHHCCG
T ss_pred ccCCCHHHHHHHHHHHHhCch
Confidence 237899999999999998764
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.09 E-value=4.4e-05 Score=56.47 Aligned_cols=134 Identities=10% Similarity=0.020 Sum_probs=85.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHHHcCCcc--EEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAGNIK--RFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g~vk--r~v~-s 50 (191)
.|+.|.+++.++++ +.|+|||+++... +.+..++++++...- .+ ++|. |
T Consensus 66 ~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv~is 144 (251)
T 3orf_A 66 IKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLL-NQGGLFVLTG 144 (251)
T ss_dssp CSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE-EEEEEEEEEC
T ss_pred EEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhh-ccCCEEEEEe
Confidence 36788888887765 3599999998521 234566777776642 22 5553 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
+...... ..+...|..+|..++.+.+. .++..+.++||++.......... ....
T Consensus 145 S~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~-------------~~~~ 207 (251)
T 3orf_A 145 ASAALNR----TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS-------------DANF 207 (251)
T ss_dssp CGGGGSC----CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT-------------TSCG
T ss_pred chhhccC----CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc-------------cccc
Confidence 4221111 12345677899998887753 36778899999877653322111 1112
Q ss_pred eeecchhhHHHHHHHHhcC-c--ccCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVIND-P--RTCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~-~--~~~~~~~~i~~ 152 (191)
..+++.+|+|++++.++.+ . ..-|+.+.+.+
T Consensus 208 ~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~ 241 (251)
T 3orf_A 208 DDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFET 241 (251)
T ss_dssp GGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred cccCCHHHHHHHHHHHhcCccccCCcceEEEEec
Confidence 3567899999999999988 3 23478888874
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.08 E-value=2.3e-06 Score=63.89 Aligned_cols=155 Identities=8% Similarity=0.046 Sum_probs=89.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------------cccHHHHHHHHHHcCCc--cEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------------FLDQLKIVHAIKVAGNI--KRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------------~~~~~~li~aa~~~g~v--kr~ 47 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++...- . .++
T Consensus 71 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~g~i 149 (271)
T 3ek2_A 71 CDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPML-SDDASL 149 (271)
T ss_dssp CCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGE-EEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHh-ccCceE
Confidence 58999999888875 5699999998531 123456777776542 1 245
Q ss_pred E-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 L-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
| .|+...... ..+...|..+|..++.+.+. .|+..+.++||+............ ...........
T Consensus 150 v~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~ 222 (271)
T 3ek2_A 150 LTLSYLGAERA----IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSF---GKILDFVESNS 222 (271)
T ss_dssp EEEECGGGTSB----CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHH---HHHHHHHHHHS
T ss_pred EEEeccccccC----CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccch---HHHHHHHHhcC
Confidence 4 233221111 12244677889888876543 489999999998776432211000 00000000001
Q ss_pred ceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccCHHHHHH
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIISQLELIS 164 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t~~e~~~ 164 (191)
....+.+.+|+|++++.++.+.. .-++.+.+.| +..++..++++
T Consensus 223 ~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdg-G~~~~~~~~~~ 268 (271)
T 3ek2_A 223 PLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDS-GFNAVVGGMAG 268 (271)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEEST-TGGGBCCCC--
T ss_pred CcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECC-Ceeeehhhhhh
Confidence 11235689999999999998643 3478899986 77777766644
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.08 E-value=1.3e-05 Score=60.55 Aligned_cols=144 Identities=13% Similarity=0.095 Sum_probs=85.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCc---cEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNI---KRF 47 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~v---kr~ 47 (191)
+|++|.+++.++++ +.|+|||+++... +.+..++++++...- . .++
T Consensus 78 ~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~~g~i 156 (285)
T 2p91_A 78 CDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLM-EGRNGAI 156 (285)
T ss_dssp CCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGG-TTSCCEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH-HHcCCEE
Confidence 58999998888775 6799999998531 224466777776542 2 466
Q ss_pred Ec-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 48 LP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 48 v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|. |+.+..... .+...|..+|..++.+.+. .|+.++.++||++.......... . ...........
T Consensus 157 v~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~-~~~~~~~~~~~ 229 (285)
T 2p91_A 157 VTLSYYGAEKVV----PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG--F-HLLMEHTTKVN 229 (285)
T ss_dssp EEEECGGGTSBC----TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTT--H-HHHHHHHHHHS
T ss_pred EEEccchhccCC----CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccc--h-HHHHHHHHhcC
Confidence 63 442221111 1234677899988877543 48999999999877643211100 0 00000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
....+.+.+|+|++++.++.++.. .++.+.+.|
T Consensus 230 p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg 264 (285)
T 2p91_A 230 PFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDN 264 (285)
T ss_dssp TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence 012356899999999999876432 377888875
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.08 E-value=1.4e-05 Score=60.06 Aligned_cols=147 Identities=5% Similarity=0.075 Sum_probs=87.4
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccC-CCC------------------------cccHHHHHHHHHH---------
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVA-YPQ------------------------FLDQLKIVHAIKV--------- 40 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~-~~~------------------------~~~~~~li~aa~~--------- 40 (191)
+|+.|.+++.++++ +.|++||+++ ... +.+..++++++..
T Consensus 83 ~Dl~~~~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 162 (281)
T 3ppi_A 83 TNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRE 162 (281)
T ss_dssp CCTTCHHHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCT
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccc
Confidence 58999999888875 6799999943 211 1223455555542
Q ss_pred -cCCccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCce
Q 038413 41 -AGNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDD 111 (191)
Q Consensus 41 -~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~ 111 (191)
.+ -.++|. |+...... ..+...|..+|..++.+.+. .|+..+.++||+........... ..
T Consensus 163 ~~~-~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~ 232 (281)
T 3ppi_A 163 NGE-RGALVLTASIAGYEG----QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGE-----EA 232 (281)
T ss_dssp TSC-CEEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCH-----HH
T ss_pred cCC-CeEEEEEecccccCC----CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccH-----HH
Confidence 12 235553 44221111 12345677899888776543 47899999999887653322110 00
Q ss_pred EEEecCC-cceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccC
Q 038413 112 VVVYGNG-EAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIIS 158 (191)
Q Consensus 112 ~~~~~~g-~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t 158 (191)
....... .....+.+.+|+|++++.++.++..-|+.+.+.| +..++
T Consensus 233 ~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdG-G~~~~ 279 (281)
T 3ppi_A 233 LAKFAANIPFPKRLGTPDEFADAAAFLLTNGYINGEVMRLDG-AQRFT 279 (281)
T ss_dssp HHHHHHTCCSSSSCBCHHHHHHHHHHHHHCSSCCSCEEEEST-TCCCC
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHHHHcCCCcCCcEEEECC-CcccC
Confidence 0000000 0113467899999999999987655588899985 66654
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=98.08 E-value=0.00011 Score=54.66 Aligned_cols=124 Identities=13% Similarity=0.127 Sum_probs=74.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHH----HHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHA----IKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~a----a~~~g~vkr~v~ 49 (191)
+|++|.+++.++++ ..|+|||+++... +.+..+++++ +++.+ ..++|.
T Consensus 85 ~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~ 163 (262)
T 3rkr_A 85 CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIIN 163 (262)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEE
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEE
Confidence 58999999888775 4899999998621 1233444444 45566 667763
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+...... ..+...|..+|..++.+.+. .|+..+.++||+.......... .....
T Consensus 164 isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------~~~~~ 226 (262)
T 3rkr_A 164 ISSLAGKNP----VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS-------------AKKSA 226 (262)
T ss_dssp ECSSCSSCC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------
T ss_pred EechhhcCC----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc-------------ccccc
Confidence 44222111 12345677899888776542 5899999999987654321110 01112
Q ss_pred eeecchhhHHHHHHHHhcCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~ 142 (191)
..++..+|+|+++..++.++.
T Consensus 227 ~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 227 LGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp --CCCHHHHHHHHHHHHTCCT
T ss_pred ccCCCHHHHHHHHHHHhcCcc
Confidence 346789999999999998754
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.07 E-value=2.6e-05 Score=59.81 Aligned_cols=150 Identities=11% Similarity=0.147 Sum_probs=87.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++ ++.+.-.++| .
T Consensus 114 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~i 193 (317)
T 3oec_A 114 ADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFV 193 (317)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 58999998888775 6899999998642 22334444544 3332123455 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccc-----cCCCCCCce----E
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVL-----LRPFEPHDD----V 112 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~-----~~~~~~~~~----~ 112 (191)
|| .+... ......|..+|..++.+.+. .|+....++||++........ ......... .
T Consensus 194 sS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (317)
T 3oec_A 194 SSTVGLRG-----APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAA 268 (317)
T ss_dssp CCGGGSSC-----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHH
T ss_pred CcHHhcCC-----CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHH
Confidence 44 22211 12245677899888877653 489999999999876532110 000000000 0
Q ss_pred EEec-CCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCc
Q 038413 113 VVYG-NGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNI 156 (191)
Q Consensus 113 ~~~~-~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~ 156 (191)
.... ....+..+++.+|||++++.++.+.. . -|+.+.+.| +..
T Consensus 269 ~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdG-G~~ 314 (317)
T 3oec_A 269 ELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDG-GQL 314 (317)
T ss_dssp HHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST-TGG
T ss_pred HHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECc-chh
Confidence 0000 11122567899999999998887643 2 378888885 543
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.8e-05 Score=58.49 Aligned_cols=144 Identities=14% Similarity=0.081 Sum_probs=84.7
Q ss_pred CCCCCHHHHHHhhcc-------------CcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccE
Q 038413 1 GELDEHEKIVSILKE-------------VDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-------------~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr 46 (191)
+|+.|.+++.++++. .|++||+++... +.+..++++++... + -.+
T Consensus 64 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~ 142 (255)
T 3icc_A 64 ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-NSR 142 (255)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-EEE
T ss_pred cCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-CCE
Confidence 478888887776642 899999998642 23345666766543 2 235
Q ss_pred EEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+|. |+...... ......|..+|..++.+.+. .|+....++||+........... ...........
T Consensus 143 iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~ 215 (255)
T 3icc_A 143 IINISSAATRIS----LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS---DPMMKQYATTI 215 (255)
T ss_dssp EEEECCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT---SHHHHHHHHHT
T ss_pred EEEeCChhhccC----CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc---cHHHHHhhhcc
Confidence 553 44221111 12245677899888876542 58999999999876643222110 00000001011
Q ss_pred cceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
.....+.+.+|+|++++.++.+.. .-++.+.+.|
T Consensus 216 ~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg 251 (255)
T 3icc_A 216 SAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG 251 (255)
T ss_dssp STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred CCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecC
Confidence 111345689999999998887543 2378888875
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.07 E-value=5.3e-06 Score=62.21 Aligned_cols=147 Identities=10% Similarity=0.112 Sum_probs=87.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..+++++ +++.+ ..++|.
T Consensus 60 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~i 138 (269)
T 3vtz_A 60 IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINI 138 (269)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 58999998888775 6899999998642 1223344444 44556 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccC--CCC-C---CceEEEecC
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLR--PFE-P---HDDVVVYGN 117 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~--~~~-~---~~~~~~~~~ 117 (191)
|+...... ..+...|..+|..++.+.+. .++....++||++.......... ... . ......+..
T Consensus 139 sS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (269)
T 3vtz_A 139 ASVQSYAA----TKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR 214 (269)
T ss_dssp CCGGGTSB----CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH
T ss_pred CchhhccC----CCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh
Confidence 43221111 12245677899988877653 26888889999887654221110 000 0 000000111
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
......+.+.+|+|++++.++.++. .-++.+.+.|
T Consensus 215 ~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 251 (269)
T 3vtz_A 215 QHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDG 251 (269)
T ss_dssp HSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECC
Confidence 1111346789999999999888653 2378888885
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=1.3e-05 Score=59.23 Aligned_cols=143 Identities=13% Similarity=0.126 Sum_probs=84.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..+++++ +++.+...++|.
T Consensus 59 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i 138 (247)
T 3rwb_A 59 ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISI 138 (247)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 58999999888875 6899999998642 1233444454 655541346653
Q ss_pred CCc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+. +... ..+...|..+|..++.+.+. .|+....++||++.......... .............
T Consensus 139 sS~~~~~~-----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~ 209 (247)
T 3rwb_A 139 ASNTFFAG-----TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPH----NEAFGFVEMLQAM 209 (247)
T ss_dssp CCTHHHHT-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGG----GGGHHHHHHHSSS
T ss_pred CchhhccC-----CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccCh----hHHHHHHhccccc
Confidence 432 2111 02245677899888776543 58899999999887653322110 0000000000001
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+.+.+|+|+++..++.+.. . -++.+.+.|
T Consensus 210 ~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG 242 (247)
T 3rwb_A 210 KGKGQPEHIADVVSFLASDDARWITGQTLNVDA 242 (247)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 234678999999999887653 2 378888874
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.05 E-value=2.4e-05 Score=58.60 Aligned_cols=144 Identities=10% Similarity=0.034 Sum_probs=82.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC-CccEEE-cCCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG-NIKRFL-PSEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g-~vkr~v-~s~~ 52 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++...- .-.++| .|+.
T Consensus 84 ~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~ 163 (267)
T 3u5t_A 84 ADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS 163 (267)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence 58999998888775 6899999998642 223455666665431 012555 2332
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
..... ......|..+|..++.+.+. .|+....++||++.......... ......+........+.
T Consensus 164 ~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~~p~~r~~ 235 (267)
T 3u5t_A 164 QVGLL----HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS----DEVRDRFAKLAPLERLG 235 (267)
T ss_dssp HHHHC----CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---------------CHHHHHTSSTTCSCB
T ss_pred hhccC----CCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC----HHHHHHHHhcCCCCCCc
Confidence 11111 02244677899988877653 47889999999876643221100 00000011111123467
Q ss_pred chhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 126 YEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
+.+|+|++++.++.+.. . -|+.+.+.|
T Consensus 236 ~pedvA~~v~~L~s~~~~~itG~~i~vdG 264 (267)
T 3u5t_A 236 TPQDIAGAVAFLAGPDGAWVNGQVLRANG 264 (267)
T ss_dssp CHHHHHHHHHHHHSTTTTTCCSEEEEESS
T ss_pred CHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence 89999999999887653 2 378888874
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.04 E-value=0.00012 Score=54.98 Aligned_cols=140 Identities=9% Similarity=0.083 Sum_probs=76.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHH----HHHHcCC-ccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVH----AIKVAGN-IKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~----aa~~~g~-vkr~v 48 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++ .+++.+. -.++|
T Consensus 81 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV 160 (272)
T 4dyv_A 81 TDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRII 160 (272)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEE
Confidence 58999999888875 7899999998631 122333344 4444320 13555
Q ss_pred c-CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 49 P-SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 49 ~-s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
. |+ .+... ..+...|..+|..++.+.+. .|+....++||+............ .. ... ...
T Consensus 161 ~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~----~~~-~~~ 229 (272)
T 4dyv_A 161 NNGSISATSP-----RPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG-VP----QAD-LSI 229 (272)
T ss_dssp EECCSSTTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------
T ss_pred EECchhhcCC-----CCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc-ch----hhh-hcc
Confidence 3 43 22211 12345677899888877653 478899999998776433221110 00 000 111
Q ss_pred ceeeecchhhHHHHHHHHhcCccc-CCceeEee
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPRT-CNRIVIYR 151 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~~-~~~~~~i~ 151 (191)
....+.+.+|+|++++.++.+|.. ....+.+.
T Consensus 230 ~~~~~~~pedvA~~v~fL~s~~~~~~~~~i~i~ 262 (272)
T 4dyv_A 230 KVEPVMDVAHVASAVVYMASLPLDANVQFMTIM 262 (272)
T ss_dssp ------CHHHHHHHHHHHHHSCTTSCCCEEEEE
T ss_pred cccCCCCHHHHHHHHHHHhCCCCcCccceEEEe
Confidence 123478999999999999998753 33444443
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.04 E-value=2.5e-05 Score=58.78 Aligned_cols=150 Identities=12% Similarity=0.120 Sum_probs=86.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHH----cCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKV----AGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~----~g~vkr 46 (191)
+|++|.+++.++++ +.|+|||+++... +.+..++++++.. .+ .+
T Consensus 65 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~ 142 (280)
T 1xkq_A 65 ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GE 142 (280)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CE
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--Cc
Confidence 58999998888775 6899999998431 1233455555543 33 46
Q ss_pred EE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCC----CceEEE
Q 038413 47 FL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEP----HDDVVV 114 (191)
Q Consensus 47 ~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~----~~~~~~ 114 (191)
+| .|+....... ..+...|..+|..++.+.+. .|+.++.++||++.............. ......
T Consensus 143 iv~isS~~~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~ 219 (280)
T 1xkq_A 143 IVNVSSIVAGPQA---QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS 219 (280)
T ss_dssp EEEECCGGGSSSC---CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred EEEecCccccCCC---CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHH
Confidence 65 3443221111 02245677899888877553 589999999999876542221000000 000000
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCc-c--cCCceeEeecCCCc
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDP-R--TCNRIVIYRPQTNI 156 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~-~--~~~~~~~i~~~~~~ 156 (191)
.........+.+.+|+|++++.++.++ . ..++.+.+.| +..
T Consensus 220 ~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdg-G~~ 263 (280)
T 1xkq_A 220 HKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADG-GTS 263 (280)
T ss_dssp CTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST-TGG
T ss_pred HHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECC-Ccc
Confidence 000001124678999999999988765 2 2378888885 543
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.03 E-value=1.6e-05 Score=58.95 Aligned_cols=146 Identities=10% Similarity=0.142 Sum_probs=82.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHH----HHcCCccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAI----KVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa----~~~g~vkr~v- 48 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ .++|
T Consensus 57 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~ 134 (254)
T 3kzv_A 57 GDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVF 134 (254)
T ss_dssp SCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEE
Confidence 58999998888775 6899999998631 22344555555 5544 3555
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEecccccccccccccCCC----CCCceEEEecCCc
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLLRPF----EPHDDVVVYGNGE 119 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~~~~----~~~~~~~~~~~g~ 119 (191)
.||...... ..+...|..+|..++.+.+. .++....++||++............ ........+....
T Consensus 135 isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (254)
T 3kzv_A 135 VSSDACNMY----FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK 210 (254)
T ss_dssp ECCSCCCCS----SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH
T ss_pred EcCchhccC----CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH
Confidence 344221111 12345677899988877653 4788899999987765432211100 0000000010111
Q ss_pred ceeeecchhhHHHHHHHHhcCc--c-cCCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDP--R-TCNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~--~-~~~~~~~i~~ 152 (191)
....+.+.+|+|++++.++.++ . --++.+.+.+
T Consensus 211 ~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg 246 (254)
T 3kzv_A 211 ENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYND 246 (254)
T ss_dssp TTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTC
T ss_pred hcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecC
Confidence 1134678999999999988765 2 2377788774
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.03 E-value=1.7e-05 Score=59.36 Aligned_cols=147 Identities=11% Similarity=0.100 Sum_probs=88.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCcc--EEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIK--RFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vk--r~v~-s~ 51 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++...- .+ ++|. |+
T Consensus 75 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~-~~~g~iv~isS 153 (270)
T 3is3_A 75 ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL-TEGGRIVLTSS 153 (270)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC-CTTCEEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hcCCeEEEEeC
Confidence 58999999888775 6799999998642 234566777776653 33 6653 43
Q ss_pred cc-cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc---CCC---CC-CceEEEec
Q 038413 52 FG-CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL---RPF---EP-HDDVVVYG 116 (191)
Q Consensus 52 ~g-~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~---~~~---~~-~~~~~~~~ 116 (191)
.. .... ..+...|..+|..++.+.+. .|+....++||++......... ... .. ........
T Consensus 154 ~~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (270)
T 3is3_A 154 NTSKDFS----VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAA 229 (270)
T ss_dssp TTTTTCC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHH
T ss_pred chhccCC----CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHH
Confidence 22 1111 12345677899888877653 5899999999988765432110 000 00 00000000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.......+.+.+|+|++++.++.+.. . -|+.+.+.|
T Consensus 230 ~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 267 (270)
T 3is3_A 230 HASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDG 267 (270)
T ss_dssp HHSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred hcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCC
Confidence 01111235679999999999887643 2 378888874
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.02 E-value=6.3e-06 Score=61.29 Aligned_cols=155 Identities=9% Similarity=-0.020 Sum_probs=88.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC-CccEEE-cCCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG-NIKRFL-PSEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g-~vkr~v-~s~~ 52 (191)
+|+.|.+++.++++ +.|+++|+++... +.+..++++++...- .-.++| .||.
T Consensus 61 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 140 (255)
T 4eso_A 61 SDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV 140 (255)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence 58999988876654 6899999998642 234456777776531 012455 3442
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCC-ceEEEecCCcceeee
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPH-DDVVVYGNGEAKAVF 124 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~ 124 (191)
..... ..+...|..+|..++.+.+. .|+....++||++............... ..............+
T Consensus 141 ~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 216 (255)
T 4eso_A 141 ADEGG----HPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRN 216 (255)
T ss_dssp GGSSB----CTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSC
T ss_pred hhcCC----CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCC
Confidence 21111 12345677899988877653 4899999999987664321110000000 000000000111235
Q ss_pred cchhhHHHHHHHHhcCccc-CCceeEeecCCCccCHH
Q 038413 125 NYEEDIAKCTIKVINDPRT-CNRIVIYRPQTNIISQL 160 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~~-~~~~~~i~~~~~~~t~~ 160 (191)
.+.+|+|++++.++.+... -++.+.+.| +...++.
T Consensus 217 ~~pedvA~~v~~L~s~~~~itG~~i~vdG-G~~~~l~ 252 (255)
T 4eso_A 217 GTADEVARAVLFLAFEATFTTGAKLAVDG-GLGQKLS 252 (255)
T ss_dssp BCHHHHHHHHHHHHHTCTTCCSCEEEEST-TTTTTBC
T ss_pred cCHHHHHHHHHHHcCcCcCccCCEEEECC-CccccCc
Confidence 6899999999988876332 378888985 6655543
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.00 E-value=2.7e-05 Score=58.96 Aligned_cols=141 Identities=14% Similarity=0.230 Sum_probs=84.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHH----HHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAI----KVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa----~~~g~vkr~v~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 94 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~ 172 (287)
T 3rku_A 94 LDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVN 172 (287)
T ss_dssp CCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEE
Confidence 58999999888775 5899999998531 22344555554 5555 567663
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+.. . ......|..+|..++.+.+. .|+..+.++||+............ ......... ..
T Consensus 173 isS~~~~~-~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~-~~-- 243 (287)
T 3rku_A 173 LGSIAGRD-A----YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRG-NEEQAKNVY-KD-- 243 (287)
T ss_dssp ECCGGGTS-C----CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTT-CHHHHHHHH-TT--
T ss_pred ECChhhcC-C----CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccC-cHHHHHHhh-cc--
Confidence 44 2321 1 12245677899888877653 589999999998776432111100 000000000 01
Q ss_pred eeeecchhhHHHHHHHHhcCccc--CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~ 152 (191)
..+.+.+|||++++.++.++.. .++.+.+.+
T Consensus 244 -~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~ 276 (287)
T 3rku_A 244 -TTPLMADDVADLIVYATSRKQNTVIADTLIFPT 276 (287)
T ss_dssp -SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred -cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeC
Confidence 1233789999999999987642 267777774
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.00 E-value=6.4e-06 Score=62.08 Aligned_cols=156 Identities=13% Similarity=0.120 Sum_probs=90.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------cccHHHHHHHHHHcC-CccEEE-cCC-cc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------FLDQLKIVHAIKVAG-NIKRFL-PSE-FG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------~~~~~~li~aa~~~g-~vkr~v-~s~-~g 53 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++...- .-.++| .|+ .+
T Consensus 78 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 157 (287)
T 3pxx_A 78 VDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAG 157 (287)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHH
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchh
Confidence 58999998888775 6899999998632 234567777776542 023555 233 22
Q ss_pred cC---CCC--CCCC-CCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccc-----cCCCCCCce----
Q 038413 54 CE---EDR--VRPL-PPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVL-----LRPFEPHDD---- 111 (191)
Q Consensus 54 ~~---~~~--~~~~-~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~-----~~~~~~~~~---- 111 (191)
.. ... .... .+...|..+|..++.+.+. .|+....++||++........ .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T 3pxx_A 158 LIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA 237 (287)
T ss_dssp HHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred cccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence 11 000 0000 1123567789888877543 489999999998876543210 011000000
Q ss_pred -EEEecCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 112 -VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 112 -~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
.........+..+.+.+|+|++++.++.+.. . -|+.+.+.| +..+
T Consensus 238 ~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdG-G~~~ 285 (287)
T 3pxx_A 238 LLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDA-GAML 285 (287)
T ss_dssp HHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred HhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECc-hhhh
Confidence 0001111222567889999999999887643 2 378888985 5544
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.00 E-value=2.3e-05 Score=58.48 Aligned_cols=147 Identities=12% Similarity=0.074 Sum_probs=82.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHc--CCccEEE-cCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVA--GNIKRFL-PSE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~--g~vkr~v-~s~ 51 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++... + -.++| .|+
T Consensus 70 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~iv~isS 148 (262)
T 3ksu_A 70 SDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-NGHIITIAT 148 (262)
T ss_dssp CCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-EEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCEEEEEec
Confidence 58999999888775 6899999998542 23345666766553 2 23555 233
Q ss_pred -cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 52 -FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 52 -~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
.+.... .....|..+|..++.+.+. .|+....++||++.......... ...............
T Consensus 149 ~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~~r 219 (262)
T 3ksu_A 149 SLLAAYT-----GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET----KESTAFHKSQAMGNQ 219 (262)
T ss_dssp CHHHHHH-----CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------CCCC
T ss_pred hhhccCC-----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc----hHHHHHHHhcCcccC
Confidence 221110 1123467788877766553 47889999999887654322111 011111111111234
Q ss_pred ecchhhHHHHHHHHhcCccc-CCceeEeecCCCccC
Q 038413 124 FNYEEDIAKCTIKVINDPRT-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~~-~~~~~~i~~~~~~~t 158 (191)
+.+.+|+|++++.++.+... -|+.+.+.| +....
T Consensus 220 ~~~pedvA~~v~~L~s~~~~itG~~i~vdG-g~~~~ 254 (262)
T 3ksu_A 220 LTKIEDIAPIIKFLTTDGWWINGQTIFANG-GYTTR 254 (262)
T ss_dssp SCCGGGTHHHHHHHHTTTTTCCSCEEEEST-TCCCC
T ss_pred CCCHHHHHHHHHHHcCCCCCccCCEEEECC-CccCC
Confidence 67899999999999887332 378888885 54443
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.99 E-value=6.1e-05 Score=55.11 Aligned_cols=135 Identities=10% Similarity=0.007 Sum_probs=82.0
Q ss_pred CCCCCHHHHHHhhc---------cCcEEEEccCCCC--------------------cccHHHHHHHHHHcC-CccEEE-c
Q 038413 1 GELDEHEKIVSILK---------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAG-NIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~---------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g-~vkr~v-~ 49 (191)
+|+.|.+++.++++ +.|+|||+++... +.+..++++++...- .-.++| .
T Consensus 49 ~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 128 (236)
T 1ooe_A 49 GNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLT 128 (236)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEE
Confidence 58889888877765 6899999998421 123455566666531 012555 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++.......... . ..
T Consensus 129 sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~---~----------~~ 191 (236)
T 1ooe_A 129 GAAAAMGP----TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP---N----------AD 191 (236)
T ss_dssp CCGGGGSC----CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST---T----------CC
T ss_pred CchhhccC----CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC---C----------cc
Confidence 44222111 12345677899988877653 24889999999877654322110 0 00
Q ss_pred eeeecchhhHHHHHHHHhcCcc---cCCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR---TCNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~---~~~~~~~i~~ 152 (191)
...++..+|+|++++..+..++ .-++.+.+.+
T Consensus 192 ~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~g 226 (236)
T 1ooe_A 192 HSSWTPLSFISEHLLKWTTETSSRPSSGALLKITT 226 (236)
T ss_dssp GGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHcCCCcccccccEEEEec
Confidence 1234678999999997774432 2377787775
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.2e-05 Score=59.35 Aligned_cols=141 Identities=9% Similarity=0.059 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++. +.+ .++| .
T Consensus 63 ~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~i 140 (247)
T 2jah_A 63 LDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQM 140 (247)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEE
Confidence 58999998887765 6899999998532 223345555544 333 3665 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+....... .+...|..+|..++.+.+ ..|+.++.++||++..+......... ......... + +.
T Consensus 141 sS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~-~--~~ 212 (247)
T 2jah_A 141 SSIAGRVNV----RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA-TKEMYEQRI-S--QI 212 (247)
T ss_dssp CCGGGTCCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HHHHHHHHT-T--TS
T ss_pred ccHHhcCCC----CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh-hHHHHHhcc-c--cc
Confidence 442211111 224467788987776654 25899999999988765422211000 000000000 1 12
Q ss_pred eecchhhHHHHHHHHhcCcc-cCCceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPR-TCNRIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~~~~~~~i~ 151 (191)
.+.+.+|+|++++.++.++. .....+.+.
T Consensus 213 ~~~~pedvA~~v~~l~s~~~~~~~~~i~i~ 242 (247)
T 2jah_A 213 RKLQAQDIAEAVRYAVTAPHHATVHEIFIR 242 (247)
T ss_dssp CCBCHHHHHHHHHHHHHSCTTEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHhCCCccCccceEEec
Confidence 24889999999999998764 223444443
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00013 Score=55.47 Aligned_cols=151 Identities=10% Similarity=0.098 Sum_probs=87.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHH----HcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIK----VAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~----~~g~vkr~v~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++. +.+.-.++|.
T Consensus 96 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~ 175 (299)
T 3t7c_A 96 VDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVF 175 (299)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 58999998888775 6899999998532 123344555543 3221346653
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccc-----cCCCCCCceEEE--
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVL-----LRPFEPHDDVVV-- 114 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~-----~~~~~~~~~~~~-- 114 (191)
|+...... ......|..+|..++.+.+. .|+....++||++........ ............
T Consensus 176 isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (299)
T 3t7c_A 176 TSSIGGLRG----AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQ 251 (299)
T ss_dssp ECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred ECChhhccC----CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHH
Confidence 44221111 12245677899888876543 478999999998876543210 000000000000
Q ss_pred ----ecCCcceeeecchhhHHHHHHHHhcCccc--CCceeEeecCCCcc
Q 038413 115 ----YGNGEAKAVFNYEEDIAKCTIKVINDPRT--CNRIVIYRPQTNII 157 (191)
Q Consensus 115 ----~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~ 157 (191)
... ..+..+.+.+|+|++++.++.+... -|+.+.+.| +..+
T Consensus 252 ~~~~~~~-~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG-G~~l 298 (299)
T 3t7c_A 252 VASRQMH-VLPIPYVEPADISNAILFLVSDDARYITGVSLPVDG-GALL 298 (299)
T ss_dssp HHHHHHS-SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred HHhhhhc-ccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCC-Cccc
Confidence 000 1113467899999999999886532 378888885 5443
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=2.5e-05 Score=59.23 Aligned_cols=149 Identities=7% Similarity=0.076 Sum_probs=85.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcC-CccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAG-NIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g-~vkr~v~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++...- .-.++|.
T Consensus 88 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~ 167 (293)
T 3grk_A 88 CDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILT 167 (293)
T ss_dssp CCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEE
Confidence 58999999888775 6899999998541 233456677766532 0125553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+....... .....|..+|..++.+.+. .|+....++||++.......... ..............
T Consensus 168 isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~ 240 (293)
T 3grk_A 168 LTYYGAEKVM----PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD---FRYILKWNEYNAPL 240 (293)
T ss_dssp EECGGGTSBC----TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC---HHHHHHHHHHHSTT
T ss_pred EeehhhccCC----CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc---hHHHHHHHHhcCCC
Confidence 332211111 1234677899888877653 48899999999877643211100 00000000000011
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
..+.+.+|+|++++.++.+.. .-++.+.+.| +..+
T Consensus 241 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG-G~~~ 277 (293)
T 3grk_A 241 RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADS-GYHV 277 (293)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred CCCCCHHHHHHHHHHHcCccccCCcceEEEECC-Cccc
Confidence 235679999999999887643 2378888885 5443
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=7.6e-05 Score=55.47 Aligned_cols=120 Identities=13% Similarity=0.085 Sum_probs=78.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCcc--EEEc-CC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIK--RFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vk--r~v~-s~ 51 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..++++++.+.- .+ ++|. |+
T Consensus 61 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv~~sS 139 (276)
T 1wma_A 61 LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI-KPQGRVVNVSS 139 (276)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhh-CCCCEEEEECC
Confidence 58999999888876 7899999998541 234567888887763 32 6653 43
Q ss_pred c-cc---CC--C-------------------------------CCCCCCCchhhHHHHHHHHHHHHh-----------cC
Q 038413 52 F-GC---EE--D-------------------------------RVRPLPPFEAYLEKKRIVRRAIEA-----------VE 83 (191)
Q Consensus 52 ~-g~---~~--~-------------------------------~~~~~~~~~~~~~~k~~~e~~l~~-----------~~ 83 (191)
. +. .. . ......|...|..+|..++.+.+. .+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~ 219 (276)
T 1wma_A 140 IMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDK 219 (276)
T ss_dssp HHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred hhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCc
Confidence 1 11 00 0 000012345688899888776542 47
Q ss_pred CCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCc
Q 038413 84 IPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 84 ~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
+..+.++||++...... . ..+.+.+|+|+.++.++..+
T Consensus 220 i~v~~v~PG~v~t~~~~--------~------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 220 ILLNACCPGWVRTDMAG--------P------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp CEEEEEECCSBCSTTTC--------T------------TCSBCHHHHTHHHHHHHSCC
T ss_pred eEEEEecCCccccCcCC--------c------------cccCChhHhhhhHhhhhcCc
Confidence 99999999976653211 0 13578999999999999865
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=3.3e-05 Score=57.59 Aligned_cols=144 Identities=9% Similarity=0.060 Sum_probs=85.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCc--cEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNI--KRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~v--kr~v 48 (191)
+|++|.+++.++++ ..|++||+++... ..+..++++++...- . .++|
T Consensus 66 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~g~iv 144 (266)
T 3oig_A 66 CDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMM-TEGGSIV 144 (266)
T ss_dssp CCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-TTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhc-CCCceEE
Confidence 58999988887775 5799999998532 123456777776542 2 2555
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
. |+...... ......|..+|..++.+.+. .|+..+.++||+............ ............
T Consensus 145 ~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~ 217 (266)
T 3oig_A 145 TLTYLGGELV----MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDF---NSILKDIEERAP 217 (266)
T ss_dssp EEECGGGTSC----CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH---HHHHHHHHHHST
T ss_pred EEeccccccc----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccch---HHHHHHHHhcCC
Confidence 2 33221111 12244677899888877543 478999999998776432221100 000000000001
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
...+.+.+|+|++++.++.++. .-++.+.+.|
T Consensus 218 ~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdG 251 (266)
T 3oig_A 218 LRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDS 251 (266)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECC
Confidence 1235689999999999998643 3378888885
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00013 Score=53.07 Aligned_cols=123 Identities=11% Similarity=0.136 Sum_probs=73.3
Q ss_pred CCCCCHHHHHHhhccC----cEEEEccCCCC-------------------cccHHHHHHHHH----HcCCccEEE-cCCc
Q 038413 1 GELDEHEKIVSILKEV----DVVISTVAYPQ-------------------FLDQLKIVHAIK----VAGNIKRFL-PSEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~----d~V~~~~~~~~-------------------~~~~~~li~aa~----~~g~vkr~v-~s~~ 52 (191)
+|+.|.+++.++++.+ |+|||+++... +.+..++++++. +.+ . ++| .|+.
T Consensus 54 ~D~~~~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~-~iv~isS~ 131 (230)
T 3guy_A 54 RDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-V-NVVMIMST 131 (230)
T ss_dssp CCTTCHHHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-C-EEEEECCG
T ss_pred ecCCCHHHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C-eEEEEeec
Confidence 5899999999888654 89999998542 123344555544 334 3 655 3432
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
..... ..+...|..+|..++.+.+. .|+....++||++......... .......+.
T Consensus 132 ~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~ 194 (230)
T 3guy_A 132 AAQQP----KAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG-------------KSLDTSSFM 194 (230)
T ss_dssp GGTSC----CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-----------------------------CC
T ss_pred ccCCC----CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC-------------CCCCcccCC
Confidence 21111 12345677899988877653 4788999999987664322211 001123567
Q ss_pred chhhHHHHHHHHhcCcc
Q 038413 126 YEEDIAKCTIKVINDPR 142 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~ 142 (191)
+.+|+|++++.++.++.
T Consensus 195 ~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 195 SAEDAALMIHGALANIG 211 (230)
T ss_dssp CHHHHHHHHHHHCCEET
T ss_pred CHHHHHHHHHHHHhCcC
Confidence 89999999999998653
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.94 E-value=1.3e-05 Score=65.58 Aligned_cols=148 Identities=10% Similarity=0.047 Sum_probs=93.5
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC-------------------cccHHHHHHHHHHc-CCccEEEc-CCcccCCC
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ-------------------FLDQLKIVHAIKVA-GNIKRFLP-SEFGCEED 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~-------------------~~~~~~li~aa~~~-g~vkr~v~-s~~g~~~~ 57 (191)
+|+.|.+++.+++++ .|+|||+++... +.+..++.++++.. + .++||. ||......
T Consensus 319 ~Dvtd~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~g 397 (511)
T 2z5l_A 319 CDVAERDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTWG 397 (511)
T ss_dssp CCSSCHHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTTC
T ss_pred eCCCCHHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcCC
Confidence 599999999999976 999999998642 23456778887766 6 778774 44321111
Q ss_pred CCCCCCCchhhHHHHHHHHHHHH---hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHH
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIE---AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCT 134 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~---~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~ 134 (191)
. .....|..+|..++.+.+ ..|+++++++||++.+..+.... ....+ . .....+++.+|+++++
T Consensus 398 ~----~g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~----~~~~~--~---~~g~~~l~~e~~a~~l 464 (511)
T 2z5l_A 398 N----AGQGAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGA----GEESL--S---RRGLRAMDPDAAVDAL 464 (511)
T ss_dssp C----TTBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCH----HHHHH--H---HHTBCCBCHHHHHHHH
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCcccccc----cHHHH--H---hcCCCCCCHHHHHHHH
Confidence 1 123467788888877654 46999999999986332211100 00000 0 1124578999999999
Q ss_pred HHHhcCcccCCceeEeecCCCccCHHHHHHHHHHH
Q 038413 135 IKVINDPRTCNRIVIYRPQTNIISQLELISLWEQK 169 (191)
Q Consensus 135 ~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~ 169 (191)
..++..++. .+.+. .+.+..+...+...
T Consensus 465 ~~al~~~~~---~v~v~----~~d~~~~~~~~~~~ 492 (511)
T 2z5l_A 465 LGAMGRNDV---CVTVV----DVDWERFAPATNAI 492 (511)
T ss_dssp HHHHHHTCS---EEEEC----CBCHHHHHHHHHHH
T ss_pred HHHHhCCCC---EEEEE----eCCHHHHHhhhccc
Confidence 999986532 23332 35566666665543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=0.00019 Score=54.06 Aligned_cols=152 Identities=13% Similarity=0.098 Sum_probs=87.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHHH----HcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAIK----VAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa~----~~g~vkr~v~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++. +.+.-.++|.
T Consensus 83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~ 162 (286)
T 3uve_A 83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIIL 162 (286)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 58999998888775 6899999998531 123344455443 3321135553
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccc-----cCCCCCCce----E
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVL-----LRPFEPHDD----V 112 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~-----~~~~~~~~~----~ 112 (191)
|+...... ......|..+|..++.+.+. .|+....++||++........ ......... .
T Consensus 163 isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T 3uve_A 163 TSSVGGLKA----YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMA 238 (286)
T ss_dssp ECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred ECchhhccC----CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHH
Confidence 44221111 12244677899888877653 578899999998876543210 000000000 0
Q ss_pred EEe-cCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 113 VVY-GNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 113 ~~~-~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
... .....+..+.+.+|+|++++.++.+.. . -|+.+.+.| +..+
T Consensus 239 ~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG-G~~l 285 (286)
T 3uve_A 239 PICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDA-GSCL 285 (286)
T ss_dssp HHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred HHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECC-cccc
Confidence 000 011112456789999999999887653 2 378888885 5443
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=3e-05 Score=58.92 Aligned_cols=149 Identities=14% Similarity=0.124 Sum_probs=87.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCcc--EEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIK--RFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vk--r~v 48 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++...- .+ ++|
T Consensus 87 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m-~~~g~IV 165 (296)
T 3k31_A 87 CDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLM-TNGGSIL 165 (296)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-TTCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCEEE
Confidence 58999999888875 5799999998531 234566777776542 22 555
Q ss_pred c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
. |+....... .....|..+|..++.+.+. .|+....++||++........... ............
T Consensus 166 ~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p 238 (296)
T 3k31_A 166 TLSYYGAEKVV----PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDF---HYILTWNKYNSP 238 (296)
T ss_dssp EEECGGGTSCC----TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHH---HHHHHHHHHHST
T ss_pred EEEehhhccCC----CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccch---HHHHHHHHhcCC
Confidence 3 432211111 2234677899888877553 478899999998776432111000 000000000000
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCccC
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNIIS 158 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~t 158 (191)
...+...+|+|++++.++.+.. --|+.+.+.| +..++
T Consensus 239 ~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG-G~~~~ 277 (296)
T 3k31_A 239 LRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDC-GYHVV 277 (296)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGC
T ss_pred CCCCCCHHHHHHHHHHHcCCccCCccCCEEEECC-Ccccc
Confidence 1235678999999999988643 2378889985 55544
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00026 Score=52.53 Aligned_cols=130 Identities=9% Similarity=0.004 Sum_probs=79.1
Q ss_pred CCCCCHHHHHHhhc---------cCcEEEEccCCCC--------------------cccHHHHHHHHHHc----------
Q 038413 1 GELDEHEKIVSILK---------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVA---------- 41 (191)
Q Consensus 1 gD~~d~~~l~~a~~---------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~---------- 41 (191)
+|+.|.+++.++++ ++|+|||+++... +.+..++++++...
T Consensus 79 ~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~ 158 (267)
T 1sny_A 79 IDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANES 158 (267)
T ss_dssp CCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhccccccc
Confidence 58999998888876 6999999998532 12344555555432
Q ss_pred CC----ccEEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCC
Q 038413 42 GN----IKRFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPH 109 (191)
Q Consensus 42 g~----vkr~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~ 109 (191)
+. ..++| .|+........ ...+...|..+|..++.+.+. .++.+++++||++...... .
T Consensus 159 ~~~~~~~~~iv~isS~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------~- 229 (267)
T 1sny_A 159 QPMGVGRAAIINMSSILGSIQGN-TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG-------S- 229 (267)
T ss_dssp SCSSTTTCEEEEECCGGGCSTTC-CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC-------T-
T ss_pred ccccCCCceEEEEecccccccCC-CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC-------C-
Confidence 10 13555 34422211110 012345677899888877653 4899999999986553210 0
Q ss_pred ceEEEecCCcceeeecchhhHHHHHHHHhcCcc--cCCceeEee
Q 038413 110 DDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYR 151 (191)
Q Consensus 110 ~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~ 151 (191)
..+.+.+|+|+.++.++..+. ..++.+.+.
T Consensus 230 ------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~ 261 (267)
T 1sny_A 230 ------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYD 261 (267)
T ss_dssp ------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTT
T ss_pred ------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccC
Confidence 124678999999999987542 234444443
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00017 Score=52.86 Aligned_cols=121 Identities=12% Similarity=0.106 Sum_probs=73.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v-~ 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ - ++| .
T Consensus 56 ~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~-~iv~i 133 (235)
T 3l6e_A 56 ADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-G-VLANV 133 (235)
T ss_dssp CCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-E-EEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C-EEEEE
Confidence 58999998887775 5799999998642 12333444444 3444 3 555 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|| .+... . .....|..+|..++.+.+. .|+....++||+.......... . ...
T Consensus 134 sS~~~~~~-~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-----~---------~~~ 194 (235)
T 3l6e_A 134 LSSAAQVG-K----ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD-----H---------VDP 194 (235)
T ss_dssp CCEECCSS-C----SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------------
T ss_pred eCHHhcCC-C----CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC-----C---------CCC
Confidence 44 22211 1 1234677899988877653 4788889999976553221110 0 011
Q ss_pred eeecchhhHHHHHHHHhcCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~ 142 (191)
..+.+.+|+|+.++.++.++.
T Consensus 195 ~~~~~pedvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 195 SGFMTPEDAAAYMLDALEARS 215 (235)
T ss_dssp --CBCHHHHHHHHHHHTCCCS
T ss_pred cCCCCHHHHHHHHHHHHhCCC
Confidence 256789999999999998654
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=5.3e-05 Score=56.98 Aligned_cols=147 Identities=9% Similarity=0.052 Sum_probs=86.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------------cccHHHHHHHHHHc---CCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------------FLDQLKIVHAIKVA---GNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------------~~~~~~li~aa~~~---g~vkr 46 (191)
+|++|.+++.++++ ..|++||+++... +.+..++++++... . -.+
T Consensus 82 ~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~ 160 (280)
T 3nrc_A 82 CDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NAS 160 (280)
T ss_dssp CCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCE
T ss_pred eecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCe
Confidence 58999998888775 4699999998632 12345566665543 2 235
Q ss_pred EEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 47 FLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 47 ~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
+|. |+...... ..+...|..+|..++.+.+. .|+....++||+............ ..........
T Consensus 161 iv~isS~~~~~~----~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~ 233 (280)
T 3nrc_A 161 MVALTYIGAEKA----MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF---KKMLDYNAMV 233 (280)
T ss_dssp EEEEECGGGTSC----CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH---HHHHHHHHHH
T ss_pred EEEEeccccccC----CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch---HHHHHHHHhc
Confidence 553 33221111 12245677899888877652 589999999998876543221100 0000000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
.....+.+.+|+|++++.++.+.. .-++.+.+.| +..
T Consensus 234 ~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdg-G~~ 272 (280)
T 3nrc_A 234 SPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDA-GYH 272 (280)
T ss_dssp STTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEEST-TGG
T ss_pred CCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECC-Ccc
Confidence 011235678999999999888643 3378888885 443
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0002 Score=52.88 Aligned_cols=124 Identities=13% Similarity=0.082 Sum_probs=77.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------cccHHHHHHHH----HHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLDQLKIVHAI----KVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~~~~li~aa----~~~g~vkr~v~-s 50 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|. |
T Consensus 66 ~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~is 144 (250)
T 3nyw_A 66 LDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVA 144 (250)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEc
Confidence 58999988887765 5899999998632 12234444444 5555 556663 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (191)
+...... ..+...|..+|..++.+.+. .|+....++||+........... ......
T Consensus 145 S~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------------~~~~~~ 207 (250)
T 3nyw_A 145 SRAAKYG----FADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT-------------PFKDEE 207 (250)
T ss_dssp C-----------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC-------------CSCGGG
T ss_pred cHHhcCC----CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC-------------Cccccc
Confidence 3221110 12244677899888776543 48899999999877654322111 001124
Q ss_pred ecchhhHHHHHHHHhcCcc
Q 038413 124 FNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~~ 142 (191)
+++.+|+|+++..++.++.
T Consensus 208 ~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 208 MIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp SBCHHHHHHHHHHHHTSCT
T ss_pred CCCHHHHHHHHHHHHcCCC
Confidence 6789999999999998764
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00016 Score=54.48 Aligned_cols=123 Identities=15% Similarity=0.102 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEc-cCCCC------------------cccHHHHHHHHHHc---CCccEEEc-C
Q 038413 1 GELDEHEKIVSILK-------EVDVVIST-VAYPQ------------------FLDQLKIVHAIKVA---GNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~-~~~~~------------------~~~~~~li~aa~~~---g~vkr~v~-s 50 (191)
+|++|.+++.++++ ++|+|||+ ++... +.+..++++++... + ..++|. |
T Consensus 85 ~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~is 163 (286)
T 1xu9_A 85 GTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVS 163 (286)
T ss_dssp CCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEEC
Confidence 58999888887765 78999999 45321 12344555555432 2 246653 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHH---------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIE---------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|...... ..+...|..+|..++.+.+ ..++.+++++||++......... . +...
T Consensus 164 S~~~~~~----~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~----~---------~~~~ 226 (286)
T 1xu9_A 164 SLAGKVA----YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV----S---------GIVH 226 (286)
T ss_dssp EGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS----C---------GGGG
T ss_pred CcccccC----CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhc----c---------cccc
Confidence 3221111 1234567788988876653 24788999999987664322110 0 1112
Q ss_pred eeecchhhHHHHHHHHhcCc
Q 038413 122 AVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~ 141 (191)
..+++.+|+|+.++.++..+
T Consensus 227 ~~~~~~~~vA~~i~~~~~~~ 246 (286)
T 1xu9_A 227 MQAAPKEECALEIIKGGALR 246 (286)
T ss_dssp GGCBCHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHhcC
Confidence 45688999999999998765
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00019 Score=52.70 Aligned_cols=135 Identities=8% Similarity=-0.046 Sum_probs=82.8
Q ss_pred CCCCCHHHHHHhhc---------cCcEEEEccCCCC--------------------cccHHHHHHHHHHcC-CccEEE-c
Q 038413 1 GELDEHEKIVSILK---------EVDVVISTVAYPQ--------------------FLDQLKIVHAIKVAG-NIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~---------g~d~V~~~~~~~~--------------------~~~~~~li~aa~~~g-~vkr~v-~ 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++...- .-.++| .
T Consensus 53 ~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~i 132 (241)
T 1dhr_A 53 MTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLA 132 (241)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEE
Confidence 58899888887765 6899999998531 123455666665531 012555 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+...... ..+...|..+|..++.+.+. .|+.++.++||++.......... . ..
T Consensus 133 sS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~---~----------~~ 195 (241)
T 1dhr_A 133 GAKAALDG----TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP---E----------AD 195 (241)
T ss_dssp CCGGGGSC----CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST---T----------SC
T ss_pred CCHHHccC----CCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc---c----------hh
Confidence 44222111 12345677899988877653 35888999999876543222110 0 00
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
...++..+|+|++++.++.++. .-++.+.+.|
T Consensus 196 ~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g 229 (241)
T 1dhr_A 196 FSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVT 229 (241)
T ss_dssp GGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEE
T ss_pred hccCCCHHHHHHHHHHHhcCCCcCccceEEEEeC
Confidence 1234567999999999987653 2377787774
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.85 E-value=1.7e-05 Score=59.18 Aligned_cols=146 Identities=5% Similarity=-0.021 Sum_probs=85.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC-CccEEEc-CCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG-NIKRFLP-SEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g-~vkr~v~-s~~ 52 (191)
+|++|.+++.++++ ..|++||+++... +.+..++++++...- ...++|. |+.
T Consensus 59 ~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 138 (263)
T 2a4k_A 59 ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV 138 (263)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 58999999888775 4699999998532 233456677766531 0236653 442
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeec
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFN 125 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 125 (191)
... .. .+...|..+|..++.+.+ ..|+.++.++||++......... ...............+.
T Consensus 139 ~~~-~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~~~~ 208 (263)
T 2a4k_A 139 AGL-GA----FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP-----PWAWEQEVGASPLGRAG 208 (263)
T ss_dssp TTC-CH----HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC-----HHHHHHHHHTSTTCSCB
T ss_pred hhc-CC----CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC-----HHHHHHHHhcCCCCCCc
Confidence 211 10 113346667776665544 25899999999998775432210 00000000000012367
Q ss_pred chhhHHHHHHHHhcCcc--cCCceeEeecCCCcc
Q 038413 126 YEEDIAKCTIKVINDPR--TCNRIVIYRPQTNII 157 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~ 157 (191)
+.+|+|++++.++.++. ..++.+.+.| +..+
T Consensus 209 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdg-G~~~ 241 (263)
T 2a4k_A 209 RPEEVAQAALFLLSEESAYITGQALYVDG-GRSI 241 (263)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEEST-TTTT
T ss_pred CHHHHHHHHHHHhCccccCCcCCEEEECC-Cccc
Confidence 89999999999988653 2378888885 5443
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00016 Score=54.28 Aligned_cols=143 Identities=15% Similarity=0.093 Sum_probs=84.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ +.|++||+++... +.+..+++++ +++.+.-.++| .
T Consensus 80 ~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~i 159 (277)
T 3tsc_A 80 VDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILI 159 (277)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 58999998888775 4899999998642 1233444444 44433123555 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccc-----c-----CCCCCCceE
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVL-----L-----RPFEPHDDV 112 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~-----~-----~~~~~~~~~ 112 (191)
||....... .....|..+|..++.+.+. .|+....++||++........ . ......
T Consensus 160 sS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--- 232 (277)
T 3tsc_A 160 SSAAGMKMQ----PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSH--- 232 (277)
T ss_dssp CCGGGTSCC----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTT---
T ss_pred ccHhhCCCC----CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHH---
Confidence 442211111 2245677899888877653 478999999998876542210 0 000000
Q ss_pred EEecCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 113 VVYGNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 113 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.... ..+.-+.+.+|+|++++.++.++. . -++.+.+.|
T Consensus 233 -~~~~-~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 272 (277)
T 3tsc_A 233 -VLTP-FLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQ 272 (277)
T ss_dssp -TTCC-SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -Hhhh-ccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCC
Confidence 0001 111236789999999999988754 2 378888875
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00033 Score=53.73 Aligned_cols=129 Identities=12% Similarity=0.075 Sum_probs=76.8
Q ss_pred CCCCHHHHHHhh-------ccCcEEEEccCCCC-------------------cccHHHHHH----HHHHcCCccEEEc-C
Q 038413 2 ELDEHEKIVSIL-------KEVDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGNIKRFLP-S 50 (191)
Q Consensus 2 D~~d~~~l~~a~-------~g~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~vkr~v~-s 50 (191)
|+.|.+++.+++ .+.|++||+++... ..+..++++ .+++.+ ..|+|. |
T Consensus 72 D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vs 150 (319)
T 1gz6_A 72 NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTA 150 (319)
T ss_dssp ECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred eCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEC
Confidence 667766555443 36899999998532 122233344 446666 678763 4
Q ss_pred Cc-ccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 51 EF-GCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 51 ~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|. +... . .+...|..+|...+.+.+. .|+.++.++||.. ....... . .....
T Consensus 151 S~~~~~~-~----~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~----~----------~~~~~ 210 (319)
T 1gz6_A 151 SASGIYG-N----FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETV----M----------PEDLV 210 (319)
T ss_dssp CHHHHHC-C----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGG----S----------CHHHH
T ss_pred ChhhccC-C----CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccccc----C----------Chhhh
Confidence 42 2111 1 1245677899888776543 4889999999975 2211110 0 01122
Q ss_pred eecchhhHHHHHHHHhcCccc-CCceeEee
Q 038413 123 VFNYEEDIAKCTIKVINDPRT-CNRIVIYR 151 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~-~~~~~~i~ 151 (191)
.+++.+|+|.+++.++.++.. .++.+.+.
T Consensus 211 ~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~ 240 (319)
T 1gz6_A 211 EALKPEYVAPLVLWLCHESCEENGGLFEVG 240 (319)
T ss_dssp HHSCGGGTHHHHHHHTSTTCCCCSCEEEEE
T ss_pred ccCCHHHHHHHHHHHhCchhhcCCCEEEEC
Confidence 457899999999998876543 35666664
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00038 Score=52.39 Aligned_cols=132 Identities=10% Similarity=0.140 Sum_probs=76.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccH----HHHHHHHHHcC-CccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQ----LKIVHAIKVAG-NIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~----~~li~aa~~~g-~vkr~v 48 (191)
+|++|.+++.++++ +.|++||+++... +.+. +.++..+++.+ .-.++|
T Consensus 90 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV 169 (281)
T 4dry_A 90 CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRII 169 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 58999998888775 5699999998531 1222 33444444442 023555
Q ss_pred -cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 -PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 -~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|+...... ..+...|..+|..++.+.+. .|+....++||+........... ..........
T Consensus 170 ~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~------~~~~~~~~~~ 239 (281)
T 4dry_A 170 NNGSISAQTP----RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST------GVLQANGEVA 239 (281)
T ss_dssp EECCGGGTCC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C------EEECTTSCEE
T ss_pred EECCHHhCCC----CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc------hhhhhhhccc
Confidence 344322111 12345677899888877543 57889999999876643222110 0000000011
Q ss_pred eeeecchhhHHHHHHHHhcCcc
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
...++..+|+|++++.++.+|.
T Consensus 240 ~~~~~~pedvA~~v~fL~s~~~ 261 (281)
T 4dry_A 240 AEPTIPIEHIAEAVVYMASLPL 261 (281)
T ss_dssp ECCCBCHHHHHHHHHHHHHSCT
T ss_pred ccCCCCHHHHHHHHHHHhCCCc
Confidence 1236789999999999999875
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00056 Score=50.88 Aligned_cols=146 Identities=6% Similarity=0.018 Sum_probs=84.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++ ++.+ -.++|.
T Consensus 66 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~i 144 (265)
T 3lf2_A 66 CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCV 144 (265)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEE
Confidence 58999988887764 5799999998642 12334455554 3444 446653
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCc-e---E-EEec
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHD-D---V-VVYG 116 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~-~---~-~~~~ 116 (191)
|+ .+.. . ......|..+|..++.+.+. .|+....++||++................ . . ....
T Consensus 145 sS~~~~~-~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (265)
T 3lf2_A 145 NSLLASQ-P----EPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLA 219 (265)
T ss_dssp EEGGGTS-C----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHH
T ss_pred CCcccCC-C----CCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHh
Confidence 33 2221 1 12245677899888877553 47899999999887654322211000000 0 0 0000
Q ss_pred --CCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 117 --NGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 117 --~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.......+.+.+|+|++++.++.+.. . -|+.+.+.|
T Consensus 220 ~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG 259 (265)
T 3lf2_A 220 RNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSG 259 (265)
T ss_dssp HHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESS
T ss_pred hccCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECC
Confidence 00011235689999999999887643 2 378888875
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00016 Score=58.26 Aligned_cols=141 Identities=10% Similarity=0.053 Sum_probs=83.5
Q ss_pred CCCCCHHHHHHhhc-------c-CcEEEEccCCCC-------------------cccHHHHHHHHHHc----CCccEEE-
Q 038413 1 GELDEHEKIVSILK-------E-VDVVISTVAYPQ-------------------FLDQLKIVHAIKVA----GNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g-~d~V~~~~~~~~-------------------~~~~~~li~aa~~~----g~vkr~v- 48 (191)
+|++|.+++.++++ + .|+|||+++... +.+..++.+++... + ..+||
T Consensus 266 ~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~ 344 (454)
T 3u0b_A 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIG 344 (454)
T ss_dssp CCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEE
T ss_pred EecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEE
Confidence 58899888887764 4 899999998642 34567778877765 4 45666
Q ss_pred cCCc-ccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSEF-GCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~~-g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.||. +.... .....|..+|..++.+.+ ..|+..+.+.||++........... .... ......
T Consensus 345 iSS~a~~~g~-----~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~---~~~~~~ 414 (454)
T 3u0b_A 345 LSSMAGIAGN-----RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA--TREV---GRRLNS 414 (454)
T ss_dssp ECCHHHHHCC-----TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHH---HHHSBT
T ss_pred EeChHhCCCC-----CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh--hHHH---HHhhcc
Confidence 3442 22111 123457788887766654 2589999999998766432211100 0000 000001
Q ss_pred eeeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
...+...+|+|+++..++.+.. --++.+.+.|
T Consensus 415 l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdG 448 (454)
T 3u0b_A 415 LFQGGQPVDVAELIAYFASPASNAVTGNTIRVCG 448 (454)
T ss_dssp TSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESS
T ss_pred ccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECC
Confidence 1224578999999998887543 2378888874
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00067 Score=52.65 Aligned_cols=134 Identities=11% Similarity=0.102 Sum_probs=80.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|+|||+++... +.+..++++++ ++.+ ..++|.
T Consensus 108 ~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~i 186 (346)
T 3kvo_A 108 VDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNI 186 (346)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEE
Confidence 58999998888875 7899999998632 23345555655 5555 567763
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEeccc-ccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANC-YGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+..... ..+...|..+|..++.+.+. .++....+.||. +.......... ....
T Consensus 187 SS~~~~~~~~---~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~~~~~-------------~~~~ 250 (346)
T 3kvo_A 187 SPPLNLNPVW---FKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDMLGG-------------PGIE 250 (346)
T ss_dssp CCCCCCCGGG---TSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHHHHCC---------------CG
T ss_pred CCHHHcCCCC---CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHHhhcc-------------cccc
Confidence 43 2221100 12245677899888777653 478888999995 33322111110 0011
Q ss_pred eeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 122 AVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
..+...+|+|++++.++.+....+..+.+.
T Consensus 251 ~r~~~pedvA~~v~~L~s~~~~itG~~ivd 280 (346)
T 3kvo_A 251 SQCRKVDIIADAAYSIFQKPKSFTGNFVID 280 (346)
T ss_dssp GGCBCTHHHHHHHHHHHTSCTTCCSCEEEH
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCceEEEC
Confidence 235678999999999998743333333354
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.0009 Score=50.35 Aligned_cols=133 Identities=14% Similarity=0.134 Sum_probs=80.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++.. .+ ..++|.
T Consensus 72 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~i 150 (285)
T 3sc4_A 72 GDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTL 150 (285)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999998888775 7899999998642 2234555665543 34 457663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccc-ccccccccCCCCCCceEEEecCCcc
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYG-AYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+... . ..+...|..+|..++.+.+. .|+....++||++. ......... . ...
T Consensus 151 sS~~~~~~-~---~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~---~---------~~~ 214 (285)
T 3sc4_A 151 SPPIRLEP-K---WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLG---G---------DEA 214 (285)
T ss_dssp CCCCCCSG-G---GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHT---S---------CCC
T ss_pred CChhhccC-C---CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhcc---c---------ccc
Confidence 43 22211 0 01235677899888877553 58999999999543 322221111 0 000
Q ss_pred eeeecchhhHHHHHHHHhcCcccC-CceeEe
Q 038413 121 KAVFNYEEDIAKCTIKVINDPRTC-NRIVIY 150 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~i 150 (191)
...+...+|+|++++.++.++... ++.+.+
T Consensus 215 ~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~ 245 (285)
T 3sc4_A 215 MARSRKPEVYADAAYVVLNKPSSYTGNTLLC 245 (285)
T ss_dssp CTTCBCTHHHHHHHHHHHTSCTTCCSCEEEH
T ss_pred ccCCCCHHHHHHHHHHHhCCcccccceEEEE
Confidence 123457899999999999876432 444443
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00013 Score=54.68 Aligned_cols=145 Identities=11% Similarity=0.093 Sum_probs=85.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcC-CccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAG-NIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g-~vkr~v- 48 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++...- .-.++|
T Consensus 63 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 142 (275)
T 2pd4_A 63 LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLT 142 (275)
T ss_dssp CCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEE
Confidence 58999998888775 5799999998531 234566777776641 012555
Q ss_pred cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 49 PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
.|+.+.... ..+...|..+|..++.+.+. .|+.++.++||++........... .............
T Consensus 143 isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~ 215 (275)
T 2pd4_A 143 LSYLGSTKY----MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF---RMILKWNEINAPL 215 (275)
T ss_dssp EECGGGTSB----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH---HHHHHHHHHHSTT
T ss_pred EecchhcCC----CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcccc---HHHHHHHHhcCCc
Confidence 343221111 12244677899888877653 489999999998876532211000 0000000000000
Q ss_pred eeecchhhHHHHHHHHhcCcc--cCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--TCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~~ 152 (191)
..+.+.+|+|++++.++.++. ..++.+.+.|
T Consensus 216 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdg 248 (275)
T 2pd4_A 216 RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDA 248 (275)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 125679999999999987643 2367788874
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.68 E-value=6.2e-05 Score=56.56 Aligned_cols=145 Identities=8% Similarity=0.053 Sum_probs=84.2
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-C
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~-s 50 (191)
+|+.|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|. |
T Consensus 89 ~Dv~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~is 167 (275)
T 4imr_A 89 GDLSEAGAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIG 167 (275)
T ss_dssp CCTTSTTHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred ecCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEC
Confidence 58889888887765 6899999998532 22334455544 5555 567663 4
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc-cee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE-AKA 122 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~ 122 (191)
+...... ..+...|..+|..++.+.+. .|+....++||+............ ............ ...
T Consensus 168 S~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~p~~ 241 (275)
T 4imr_A 168 SINQLRP----KSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQ--DPEGWDEYVRTLNWMG 241 (275)
T ss_dssp CGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHH--CHHHHHHHHHHHSTTC
T ss_pred CHHhCCC----CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccccccc--ChHHHHHHHhhcCccC
Confidence 4221111 12344577899888877553 478899999998876532211000 000000000000 011
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
-+...+|+|++++.++.+.. . -|+.+.+.|
T Consensus 242 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 273 (275)
T 4imr_A 242 RAGRPEEMVGAALFLASEACSFMTGETIFLTG 273 (275)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred CCcCHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence 24578999999999888653 2 378888874
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00022 Score=52.70 Aligned_cols=134 Identities=10% Similarity=0.073 Sum_probs=73.7
Q ss_pred ccCcEEEEccCCC-C-------------------cccHHHHHHH----HHHcCCccEEEc-CCcccCCCCCCCCCCchhh
Q 038413 14 KEVDVVISTVAYP-Q-------------------FLDQLKIVHA----IKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAY 68 (191)
Q Consensus 14 ~g~d~V~~~~~~~-~-------------------~~~~~~li~a----a~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~ 68 (191)
.+.|++||+++.. . +.+..+++++ +++.+ ..++|. |+...... ..+...|
T Consensus 71 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~Y 145 (254)
T 1zmt_A 71 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGP----WKELSTY 145 (254)
T ss_dssp SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSC----CTTCHHH
T ss_pred CCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccC----CCCchHH
Confidence 3789999999864 1 1223344444 44556 567763 44221111 1224567
Q ss_pred HHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCC-CC--ceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 69 LEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFE-PH--DDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 69 ~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~-~~--~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
..+|..++.+.+. .|+.++.++||++.+.....+..... .. ..............+.+.+|+|++++.++
T Consensus 146 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~ 225 (254)
T 1zmt_A 146 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLA 225 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHh
Confidence 7899888876543 48999999999984322111100000 00 00000000000113578999999999998
Q ss_pred cCcc--cCCceeEeec
Q 038413 139 NDPR--TCNRIVIYRP 152 (191)
Q Consensus 139 ~~~~--~~~~~~~i~~ 152 (191)
.++. .-++.+.+.|
T Consensus 226 s~~~~~~tG~~~~vdg 241 (254)
T 1zmt_A 226 SGSCDYLTGQVFWLAG 241 (254)
T ss_dssp TTSCGGGTTCEEEEST
T ss_pred CcccCCccCCEEEECC
Confidence 8653 2478888875
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00071 Score=49.57 Aligned_cols=121 Identities=11% Similarity=0.050 Sum_probs=74.4
Q ss_pred CCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cccHHHHHHHH----HHcCCccEEEc-
Q 038413 2 ELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLDQLKIVHAI----KVAGNIKRFLP- 49 (191)
Q Consensus 2 D~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~~~~li~aa----~~~g~vkr~v~- 49 (191)
|..|.+++.++++ +.|++||+++... +.+..++++++ ++.+ ..++|.
T Consensus 74 d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~i 152 (247)
T 3i1j_A 74 ENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFT 152 (247)
T ss_dssp TTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEE
Confidence 3377777776654 6899999998631 23345555555 5555 567664
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh--------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA--------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+... ..+...|..+|..++.+.+. .++....++||+........... ...
T Consensus 153 sS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~-------------~~~ 214 (247)
T 3i1j_A 153 SSSVGRKG-----RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYP-------------DEN 214 (247)
T ss_dssp CCGGGTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHST-------------TSC
T ss_pred cchhhcCC-----CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccc-------------ccC
Confidence 43 33211 12345677899888877542 36778889999877653322111 011
Q ss_pred eeeecchhhHHHHHHHHhcCc
Q 038413 121 KAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~ 141 (191)
+..+...+|+|+++..++.+.
T Consensus 215 ~~~~~~p~dva~~~~~l~s~~ 235 (247)
T 3i1j_A 215 PLNNPAPEDIMPVYLYLMGPD 235 (247)
T ss_dssp GGGSCCGGGGTHHHHHHHSGG
T ss_pred ccCCCCHHHHHHHHHHHhCch
Confidence 123457899999999988764
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00032 Score=51.51 Aligned_cols=76 Identities=20% Similarity=0.179 Sum_probs=45.3
Q ss_pred chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKV 137 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 137 (191)
...|..+|..++.+.+. .|+..+.++||++........... .+.......+++.+|+|++++.+
T Consensus 143 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~~~~~p~dvA~~i~~l 213 (245)
T 3e9n_A 143 NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS---------QGTNFRPEIYIEPKEIANAIRFV 213 (245)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------CCGGGSCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh---------hhcccccccCCCHHHHHHHHHHH
Confidence 45677899988877653 589999999998876543221110 00111123478899999999999
Q ss_pred hcCcccCCceeEe
Q 038413 138 INDPRTCNRIVIY 150 (191)
Q Consensus 138 l~~~~~~~~~~~i 150 (191)
+..+.. +..+++
T Consensus 214 ~~~~~~-~~~~~i 225 (245)
T 3e9n_A 214 IDAGET-TQITNV 225 (245)
T ss_dssp HTSCTT-EEEEEE
T ss_pred HcCCCc-cceeee
Confidence 988753 344444
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00051 Score=50.90 Aligned_cols=135 Identities=11% Similarity=0.051 Sum_probs=74.2
Q ss_pred CCCCCHHHHHHhhc--------cCcEEEEccC--CC--------C----------------cccH----HHHHHHHHHcC
Q 038413 1 GELDEHEKIVSILK--------EVDVVISTVA--YP--------Q----------------FLDQ----LKIVHAIKVAG 42 (191)
Q Consensus 1 gD~~d~~~l~~a~~--------g~d~V~~~~~--~~--------~----------------~~~~----~~li~aa~~~g 42 (191)
+|++|.+++.++++ ..|++||+++ .. . +.+. +.++..+++.+
T Consensus 61 ~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 140 (260)
T 2qq5_A 61 CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG 140 (260)
T ss_dssp CCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC
Confidence 58999988877654 3599999993 11 0 1122 33344555666
Q ss_pred CccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEE
Q 038413 43 NIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVV 114 (191)
Q Consensus 43 ~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~ 114 (191)
..++|. |+...... .+...|..+|..++.+.+. .|+.++.++||++............ .......
T Consensus 141 -~g~iv~isS~~~~~~-----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~ 213 (260)
T 2qq5_A 141 -QGLIVVISSPGSLQY-----MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE-EVLQDPV 213 (260)
T ss_dssp -CCEEEEECCGGGTSC-----CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------
T ss_pred -CcEEEEEcChhhcCC-----CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc-cccchhH
Confidence 667763 44322111 2345678899988877542 5899999999987765322211000 0000000
Q ss_pred ecCCccee-eecchhhHHHHHHHHhcCcc
Q 038413 115 YGNGEAKA-VFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 115 ~~~g~~~~-~~i~~~Dva~~~~~~l~~~~ 142 (191)
...-..+. .+...+|+|++++.++.++.
T Consensus 214 ~~~~~~~~~~~~~pe~va~~v~~l~s~~~ 242 (260)
T 2qq5_A 214 LKQFKSAFSSAETTELSGKCVVALATDPN 242 (260)
T ss_dssp --------CHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHhhhccCCCHHHHHHHHHHHhcCcc
Confidence 00000011 13578999999999888753
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=1.7e-05 Score=61.23 Aligned_cols=96 Identities=11% Similarity=-0.036 Sum_probs=61.3
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCcc-EEE-cCCcc---cC--CCCCCC
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIK-RFL-PSEFG---CE--EDRVRP 61 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vk-r~v-~s~~g---~~--~~~~~~ 61 (191)
|+.+.+++.++++|+|+|||+++... ..++.+++++|++.+..+ +++ .|+-. .. ......
T Consensus 67 di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~ 146 (327)
T 1y7t_A 67 GLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPG 146 (327)
T ss_dssp EEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTT
T ss_pred CeEeccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCC
Confidence 34444567888999999999998652 356799999999873133 444 44311 00 011111
Q ss_pred CCCchhhHHHHHHHHHHHH----hcCCCeEEEeccccccc
Q 038413 62 LPPFEAYLEKKRIVRRAIE----AVEIPYTFVSANCYGAY 97 (191)
Q Consensus 62 ~~~~~~~~~~k~~~e~~l~----~~~~~~tilrp~~~~~~ 97 (191)
..|.+.|..+|...++++. ..|++.+++|+...+++
T Consensus 147 ~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~ 186 (327)
T 1y7t_A 147 LNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGN 186 (327)
T ss_dssp SCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBC
T ss_pred CChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcC
Confidence 2345566667777776553 35899999998876664
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00061 Score=52.42 Aligned_cols=137 Identities=13% Similarity=0.220 Sum_probs=77.9
Q ss_pred CCCCCHHHHHHhhcc-----CcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-CC
Q 038413 1 GELDEHEKIVSILKE-----VDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~g-----~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~-s~ 51 (191)
+|++|.+++.++++. .|++||+++... +.+..+++++ +++.+ ..++|. ||
T Consensus 64 ~Dv~d~~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS 142 (327)
T 1jtv_A 64 LDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGS 142 (327)
T ss_dssp CCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEE
T ss_pred ecCCCHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECC
Confidence 589999999988864 899999997531 2234455555 45566 678773 43
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCC------CCCceEEEecCC
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPF------EPHDDVVVYGNG 118 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~------~~~~~~~~~~~g 118 (191)
....... .....|..+|..++.+.+. .|+.++.++||++...+........ ........+..-
T Consensus 143 ~~~~~~~----~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (327)
T 1jtv_A 143 VGGLMGL----PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQY 218 (327)
T ss_dssp GGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHH
T ss_pred cccccCC----CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHH
Confidence 2211111 1234677899988877543 5899999999988765422211000 000000000000
Q ss_pred ----cc--eeeecchhhHHHHHHHHhcCcc
Q 038413 119 ----EA--KAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 119 ----~~--~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
.. .+-..+.+|+|++++.++..+.
T Consensus 219 ~~~~~~~~~~~~~~pedvA~~i~~l~~~~~ 248 (327)
T 1jtv_A 219 LAHSKQVFREAAQNPEEVAEVFLTALRAPK 248 (327)
T ss_dssp HHHHHHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHcCCC
Confidence 00 0112579999999999998754
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0012 Score=49.26 Aligned_cols=126 Identities=10% Similarity=0.021 Sum_probs=74.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHH----HHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHA----IKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~a----a~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|++||+++... +.+..++.++ +++.+ -.++|.
T Consensus 69 ~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~i 147 (274)
T 3e03_A 69 CDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTL 147 (274)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEE
Confidence 58999998887765 6899999998632 1223344444 44455 567663
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+........ ..+...|..+|..++.+.+. .|+....++||++....+... . .+....
T Consensus 148 sS~~~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~------------~-~~~~~~ 212 (274)
T 3e03_A 148 APPPSLNPAW--WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM------------L-PGVDAA 212 (274)
T ss_dssp CCCCCCCHHH--HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--------------------CCCGG
T ss_pred CChHhcCCCC--CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh------------c-cccccc
Confidence 3321111000 01134577899888876543 589999999995433211110 0 011112
Q ss_pred eecchhhHHHHHHHHhcCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~ 142 (191)
.+.+.+|+|++++.++.++.
T Consensus 213 ~~~~pedvA~~v~~l~s~~~ 232 (274)
T 3e03_A 213 ACRRPEIMADAAHAVLTREA 232 (274)
T ss_dssp GSBCTHHHHHHHHHHHTSCC
T ss_pred ccCCHHHHHHHHHHHhCccc
Confidence 36689999999999998653
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=97.41 E-value=0.001 Score=50.05 Aligned_cols=144 Identities=10% Similarity=0.059 Sum_probs=81.5
Q ss_pred CCCCC----HHHHHHhhc-------cCcEEEEccCCCC---c--------------------------ccHHHHHHHHHH
Q 038413 1 GELDE----HEKIVSILK-------EVDVVISTVAYPQ---F--------------------------LDQLKIVHAIKV 40 (191)
Q Consensus 1 gD~~d----~~~l~~a~~-------g~d~V~~~~~~~~---~--------------------------~~~~~li~aa~~ 40 (191)
+|++| .+++.++++ ++|++||+++... . .+..++++++..
T Consensus 81 ~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 160 (288)
T 2x9g_A 81 ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 160 (288)
T ss_dssp CCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred eecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 58888 888877765 6899999998531 1 113344555443
Q ss_pred cC---C------ccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc
Q 038413 41 AG---N------IKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL 103 (191)
Q Consensus 41 ~g---~------vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~ 103 (191)
.- . ..++|. |+...... ..+...|..+|..++.+.+. .|+.++.++||++.... . ..
T Consensus 161 ~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~ 234 (288)
T 2x9g_A 161 RQKGTNPNCTSSNLSIVNLCDAMVDQP----CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG 234 (288)
T ss_dssp HC--------CCCEEEEEECCTTTTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC
T ss_pred HHhhcCCCCCCCCeEEEEEecccccCC----CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC
Confidence 21 0 125553 43221111 12245677899888766543 48999999999877653 1 10
Q ss_pred CCCCCCceEEEecCCcceeee-cchhhHHHHHHHHhcCcc--cCCceeEeecCCCc
Q 038413 104 RPFEPHDDVVVYGNGEAKAVF-NYEEDIAKCTIKVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 104 ~~~~~~~~~~~~~~g~~~~~~-i~~~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
. .....+........+ .+.+|+|++++.++.++. .-++.+.+.| +..
T Consensus 235 ----~-~~~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG-G~~ 284 (288)
T 2x9g_A 235 ----E-EEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDG-GLS 284 (288)
T ss_dssp ----H-HHHHHHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGG
T ss_pred ----h-HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECc-chh
Confidence 0 000000000000123 689999999999987643 2367788874 443
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0014 Score=50.41 Aligned_cols=84 Identities=7% Similarity=-0.097 Sum_probs=51.5
Q ss_pred chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee-eecchhhHHHHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA-VFNYEEDIAKCTIK 136 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~i~~~Dva~~~~~ 136 (191)
...|..+|..++.+.+. .|+.++.++||++.... .... ............. .+.+.+|+|++++.
T Consensus 231 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~------~~~~~~~~~~p~~~r~~~pedvA~~v~~ 303 (328)
T 2qhx_A 231 YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPP------AVWEGHRSKVPLYQRDSSAAEVSDVVIF 303 (328)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCH------HHHHHHHTTCTTTTSCBCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccH------HHHHHHHhhCCCCCCCCCHHHHHHHHHH
Confidence 45677899888877653 48999999999877643 1110 0000000000001 35689999999999
Q ss_pred HhcCcc--cCCceeEeecCCCc
Q 038413 137 VINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 137 ~l~~~~--~~~~~~~i~~~~~~ 156 (191)
++.++. .-++.+.+.| +..
T Consensus 304 l~s~~~~~itG~~i~vdG-G~~ 324 (328)
T 2qhx_A 304 LCSSKAKYITGTCVKVDG-GYS 324 (328)
T ss_dssp HHSGGGTTCCSCEEEEST-TGG
T ss_pred HhCccccCccCcEEEECC-Ccc
Confidence 987643 2378888875 543
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00081 Score=49.88 Aligned_cols=146 Identities=12% Similarity=0.157 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC-C-------------------cccHHHHHHH----HHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP-Q-------------------FLDQLKIVHA----IKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~-~-------------------~~~~~~li~a----a~~~g~vkr~v~ 49 (191)
+|+.|.+++.++++ +.|++||+++.. . +.+..+++++ +++.+ ..++|.
T Consensus 63 ~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~ 141 (262)
T 1zem_A 63 CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVN 141 (262)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 58999988877765 689999999854 1 1223344444 44456 567763
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccc--------cCCCCC-Cce-
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVL--------LRPFEP-HDD- 111 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~--------~~~~~~-~~~- 111 (191)
|+....... .....|..+|..++.+.+. .|+.++.++||++........ ...... ...
T Consensus 142 isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (262)
T 1zem_A 142 TASMAGVKGP----PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKV 217 (262)
T ss_dssp ECCHHHHSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHH
T ss_pred EcchhhccCC----CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHH
Confidence 442211111 1244677889877766542 589999999998766432211 000000 000
Q ss_pred E-EEecCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEee
Q 038413 112 V-VVYGNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYR 151 (191)
Q Consensus 112 ~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~ 151 (191)
. ..+........+...+|+|++++.++.++. . -++.+.+.
T Consensus 218 ~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vd 260 (262)
T 1zem_A 218 VAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIA 260 (262)
T ss_dssp HHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecC
Confidence 0 000000001135689999999999887643 2 36777775
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0025 Score=46.95 Aligned_cols=141 Identities=8% Similarity=0.082 Sum_probs=79.1
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-----------------ccc----HHHHHHHHHHcCCccEEE-cCC-ccc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-----------------FLD----QLKIVHAIKVAGNIKRFL-PSE-FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-----------------~~~----~~~li~aa~~~g~vkr~v-~s~-~g~ 54 (191)
+|++|+++++++++ +.|+++++++... +.+ .+.++..+++.| -++| .|| .+.
T Consensus 61 ~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~ 138 (242)
T 4b79_A 61 LDITDSQRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG--GSILNIASMYST 138 (242)
T ss_dssp CCTTCHHHHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--EEEEEECCGGGT
T ss_pred ecCCCHHHHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeecccc
Confidence 58999998888775 6899999998642 112 233344444443 2444 343 332
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce-eeecc
Q 038413 55 EEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK-AVFNY 126 (191)
Q Consensus 55 ~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~ 126 (191)
.. . .....|..+|..+..+.+. .|+....+.||++..+....... ..+....... ..+ .-+..
T Consensus 139 ~~-~----~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~---~~~~~~~~~~-~~PlgR~g~ 209 (242)
T 4b79_A 139 FG-S----ADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA---DVEATRRIMQ-RTPLARWGE 209 (242)
T ss_dssp SC-C----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC---CHHHHHHHHH-TCTTCSCBC
T ss_pred CC-C----CCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC---CHHHHHHHHh-cCCCCCCcC
Confidence 11 1 1234577899888766542 58888999999876543222110 0000000000 001 11456
Q ss_pred hhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 127 EEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
.+|||.+++-++.+.. .. ++.+.+.|
T Consensus 210 peeiA~~v~fLaSd~a~~iTG~~l~VDG 237 (242)
T 4b79_A 210 APEVASAAAFLCGPGASFVTGAVLAVDG 237 (242)
T ss_dssp HHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHHhCchhcCccCceEEECc
Confidence 8999999988887643 22 67788874
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0022 Score=47.60 Aligned_cols=144 Identities=10% Similarity=0.063 Sum_probs=82.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------c----ccHHHHHHHHHHcCCccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------F----LDQLKIVHAIKVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~----~~~~~li~aa~~~g~vkr~v- 48 (191)
+|++|++++.++++ +.|++++.++... + ...+.++..+++.+ --++|
T Consensus 63 ~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVn 141 (254)
T 4fn4_A 63 ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVN 141 (254)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEE
Confidence 58999998887753 5899999998431 1 12355566666655 34555
Q ss_pred cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|| .+... . .....|..+|..+..+.+. .|+....+.||++..+......... ............
T Consensus 142 isS~~g~~~-~----~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~--~~~~~~~~~~~~ 214 (254)
T 4fn4_A 142 TASIAGIRG-G----FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPS--ELGMRTLTKLMS 214 (254)
T ss_dssp ECCGGGTCS-S----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCC--HHHHHHHHHHHT
T ss_pred EechhhcCC-C----CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCc--HHHHHHHHhcCC
Confidence 343 33221 1 1234677889888766542 5888999999987654322111100 000000000000
Q ss_pred e-eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 121 K-AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 121 ~-~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
+ .-+...+|||.+++-++.+.. . -++.+.+.|
T Consensus 215 ~~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDG 249 (254)
T 4fn4_A 215 LSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDG 249 (254)
T ss_dssp TCCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCC
Confidence 0 123468999999998887643 2 278888874
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0046 Score=46.56 Aligned_cols=83 Identities=8% Similarity=-0.032 Sum_probs=50.8
Q ss_pred chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee--eecchhhHHHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA--VFNYEEDIAKCTI 135 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~i~~~Dva~~~~ 135 (191)
...|..+|..++.+.+. .|+.++.++||++.... . . .. ......... .+. -+.+.+|+|++++
T Consensus 194 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~-~~----~~~~~~~~~-~p~~~r~~~pedvA~~v~ 265 (291)
T 1e7w_A 194 YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M-PP----AVWEGHRSK-VPLYQRDSSAAEVSDVVI 265 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S-CH----HHHHHHHTT-CTTTTSCBCHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C-CH----HHHHHHHhh-CCCCCCCCCHHHHHHHHH
Confidence 44677899888776543 48899999999876654 2 1 00 000000000 111 3567999999999
Q ss_pred HHhcCcc--cCCceeEeecCCCc
Q 038413 136 KVINDPR--TCNRIVIYRPQTNI 156 (191)
Q Consensus 136 ~~l~~~~--~~~~~~~i~~~~~~ 156 (191)
.++.++. .-++.+.+.| +..
T Consensus 266 ~l~s~~~~~itG~~i~vdG-G~~ 287 (291)
T 1e7w_A 266 FLCSSKAKYITGTCVKVDG-GYS 287 (291)
T ss_dssp HHHSGGGTTCCSCEEEEST-TGG
T ss_pred HHhCCcccCccCcEEEECC-Ccc
Confidence 9987643 2367888874 543
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.004 Score=46.66 Aligned_cols=147 Identities=8% Similarity=-0.010 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------------cccHHHHHHHHH----HcCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------------FLDQLKIVHAIK----VAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------------~~~~~~li~aa~----~~g~vk 45 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++. +.+ .
T Consensus 58 ~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--g 135 (281)
T 3zv4_A 58 GDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR--G 135 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--C
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--C
Confidence 58999888877764 5799999998531 122344455443 333 2
Q ss_pred EEE-cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEE----
Q 038413 46 RFL-PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV---- 113 (191)
Q Consensus 46 r~v-~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~---- 113 (191)
++| .|+ .+... . .....|..+|..++.+.+. .++....++||+........... ........
T Consensus 136 ~iv~isS~~~~~~-~----~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~ 209 (281)
T 3zv4_A 136 SVVFTISNAGFYP-N----GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSL-GLSEQSISSVPL 209 (281)
T ss_dssp EEEEECCGGGTSS-S----SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTC-C--------CCH
T ss_pred eEEEEecchhccC-C----CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCccccccc-ccccccccchhH
Confidence 544 343 33211 1 1234577899988877653 23778889999877643221100 00000000
Q ss_pred --EecCCcceeeecchhhHHHHHHHHhcCcc---cCCceeEeecCCCc
Q 038413 114 --VYGNGEAKAVFNYEEDIAKCTIKVINDPR---TCNRIVIYRPQTNI 156 (191)
Q Consensus 114 --~~~~g~~~~~~i~~~Dva~~~~~~l~~~~---~~~~~~~i~~~~~~ 156 (191)
..........+...+|+|++++.++.++. --|+.+.+.| +..
T Consensus 210 ~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdG-G~~ 256 (281)
T 3zv4_A 210 ADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDG-GMG 256 (281)
T ss_dssp HHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESS-SGG
T ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECC-CCc
Confidence 00001111235688999999999998432 2378888885 443
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.026 Score=42.35 Aligned_cols=67 Identities=10% Similarity=-0.053 Sum_probs=43.5
Q ss_pred chhhHHHHHHHHHHHHh-----cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhc
Q 038413 65 FEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVIN 139 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~ 139 (191)
...|..+|..++.+.+. .++....++||+........ ......++.|+.++.++.
T Consensus 233 ~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~--------------------~~~~~~~~~a~~~~~~~~ 292 (311)
T 3o26_A 233 GAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG--------------------IGNYTAEEGAEHVVRIAL 292 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT--------------------CCSBCHHHHHHHHHHHHT
T ss_pred chhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC--------------------CCCCCHHHHHHHHHHHHh
Confidence 34677899998887654 35777888999765532111 012468899999999888
Q ss_pred Ccc-cCCceeEee
Q 038413 140 DPR-TCNRIVIYR 151 (191)
Q Consensus 140 ~~~-~~~~~~~i~ 151 (191)
.|+ ..+..++.+
T Consensus 293 ~~~~~~~g~~~~~ 305 (311)
T 3o26_A 293 FPDDGPSGFFYDC 305 (311)
T ss_dssp CCSSCCCSCEETC
T ss_pred CCCCCCCceEecc
Confidence 764 334444443
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0045 Score=45.99 Aligned_cols=144 Identities=9% Similarity=0.080 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------ccc----HHHHHHHHHHcCCccEEE-cC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLD----QLKIVHAIKVAGNIKRFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~----~~~li~aa~~~g~vkr~v-~s 50 (191)
+|++|.+++.++++ ..|+++++++... +.+ .+.++..+++.+ -++| .|
T Consensus 62 ~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnis 139 (258)
T 4gkb_A 62 VELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--GAIVNIS 139 (258)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC
T ss_pred eecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEe
Confidence 58899888776653 5899999998632 112 233444454443 2444 33
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCC-CCCCceEEEecCCcce
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRP-FEPHDDVVVYGNGEAK 121 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~ 121 (191)
| .+.... .....|..+|..+..+.+ ..|+....+.||++........... ........-... ..+
T Consensus 140 S~~~~~~~-----~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~p 213 (258)
T 4gkb_A 140 SKTAVTGQ-----GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAA-KVP 213 (258)
T ss_dssp CTHHHHCC-----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHT-TCT
T ss_pred ehhhccCC-----CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHh-cCC
Confidence 3 332111 123457788988876654 2589999999998776433222110 000000000000 011
Q ss_pred --eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 --AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 --~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|||.+++-++.+.. . -|+.+.+.|
T Consensus 214 lg~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDG 248 (258)
T 4gkb_A 214 LGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDG 248 (258)
T ss_dssp TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCccCCeEEECC
Confidence 124568999999988887643 2 278888875
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0022 Score=52.23 Aligned_cols=128 Identities=9% Similarity=0.092 Sum_probs=81.7
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCC-C-------------------cccHHHHHHHHHHcCCccEEEc-CC-c
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYP-Q-------------------FLDQLKIVHAIKVAGNIKRFLP-SE-F 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~-~-------------------~~~~~~li~aa~~~g~vkr~v~-s~-~ 52 (191)
+|+.|.+++.++++ ..|+|||+++.. . +.+..++.+++...+ ..+||. || .
T Consensus 299 ~Dvtd~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a 377 (496)
T 3mje_A 299 CDAADREALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGA 377 (496)
T ss_dssp CCTTCHHHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHH
T ss_pred ccCCCHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChH
Confidence 58999999998885 479999999864 1 345688889988888 888773 44 2
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHH---hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhh
Q 038413 53 GCEEDRVRPLPPFEAYLEKKRIVRRAIE---AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEED 129 (191)
Q Consensus 53 g~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~D 129 (191)
+.. .. .....|..+|..++.+.+ ..|++++.+.||.+.+.++...... ... +. ......+..++
T Consensus 378 ~~~-g~----~g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~---~~~--l~---~~g~~~l~pe~ 444 (496)
T 3mje_A 378 AVW-GS----GGQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPEV---HDR--LV---RQGVLAMEPEH 444 (496)
T ss_dssp HHT-TC----TTCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC---------CHH--HH---HTTEEEECHHH
T ss_pred hcC-CC----CCcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccChHH---HHH--HH---hcCCCCCCHHH
Confidence 221 11 113456778877765543 4799999999997665432211000 000 00 11134567899
Q ss_pred HHHHHHHHhcCcc
Q 038413 130 IAKCTIKVINDPR 142 (191)
Q Consensus 130 va~~~~~~l~~~~ 142 (191)
.++.+..++..++
T Consensus 445 ~~~~l~~~l~~~~ 457 (496)
T 3mje_A 445 ALGALDQMLENDD 457 (496)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCC
Confidence 9999988887653
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0037 Score=46.41 Aligned_cols=142 Identities=9% Similarity=0.086 Sum_probs=80.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHc-CCccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVA-GNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~-g~vkr~v- 48 (191)
+|++|++++.++++ +.|+++++++... +.+ .+.++..+++. + --++|
T Consensus 65 ~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~-~G~IVn 143 (255)
T 4g81_D 65 FDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS-GGKIIN 143 (255)
T ss_dssp CCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-CEEEEE
T ss_pred eeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccC-CCEEEE
Confidence 58999988877653 5799999998642 122 24445555432 2 23555
Q ss_pred cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|| .+... . .....|..+|..+..+.+. .|+....+.||++........... ......... ..
T Consensus 144 isS~~~~~~-~----~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~---~~~~~~~~~-~~ 214 (255)
T 4g81_D 144 IGSLTSQAA-R----PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED---KQFDSWVKS-ST 214 (255)
T ss_dssp ECCGGGTSB-C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC---HHHHHHHHH-HS
T ss_pred EeehhhcCC-C----CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC---HHHHHHHHh-CC
Confidence 343 33211 1 1234577889888766542 588899999998876543222110 000000000 00
Q ss_pred e-eeecchhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 121 K-AVFNYEEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 121 ~-~~~i~~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
+ .-+...+|||.+++-++.+.. .. ++.+.+.|
T Consensus 215 Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDG 249 (255)
T 4g81_D 215 PSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDG 249 (255)
T ss_dssp TTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECC
Confidence 0 114468999999988886643 22 78888874
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.009 Score=49.92 Aligned_cols=154 Identities=10% Similarity=0.048 Sum_probs=87.9
Q ss_pred CCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHH----HHcCCccEEEc-C
Q 038413 2 ELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAI----KVAGNIKRFLP-S 50 (191)
Q Consensus 2 D~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa----~~~g~vkr~v~-s 50 (191)
|+.|.+++.++++ ..|++||+++... +.+..++++++ ++.+ ..++|. |
T Consensus 82 D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~is 160 (613)
T 3oml_A 82 DYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTS 160 (613)
T ss_dssp CCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEC
T ss_pred EeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEC
Confidence 6777776666654 5799999998642 12334444444 5665 567663 4
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
| .+... . .....|..+|..++.+.+. .|+....+.||..... .... . .....
T Consensus 161 S~a~~~~-~----~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~-~~~~-----~---------~~~~~ 220 (613)
T 3oml_A 161 SNSGIYG-N----FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRM-TEGI-----L---------PDILF 220 (613)
T ss_dssp CHHHHHC-C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCC-----C---------CHHHH
T ss_pred CHHHcCC-C----CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChh-hhhc-----c---------chhhh
Confidence 4 22211 1 1244677899888776543 4788888999853211 0000 0 01112
Q ss_pred eecchhhHHHHHHHHhcCccc-CCceeEeecC-------------------CCccCHHHHHHHHHHHhCCceEE
Q 038413 123 VFNYEEDIAKCTIKVINDPRT-CNRIVIYRPQ-------------------TNIISQLELISLWEQKTGRSFKR 176 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~-~~~~~~i~~~-------------------~~~~t~~e~~~~~~~~~g~~~~~ 176 (191)
.....+|+|.+++.++.+... -++.+.+.|| +...|..++.+.+.++.+.....
T Consensus 221 ~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~~~~ 294 (613)
T 3oml_A 221 NELKPKLIAPVVAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMSKAK 294 (613)
T ss_dssp TTCCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCTTCB
T ss_pred hcCCHHHHHHHHHHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhccccCc
Confidence 345789999999988876532 2566655421 12368888999999988876533
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0023 Score=40.94 Aligned_cols=46 Identities=24% Similarity=0.277 Sum_probs=38.8
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s 50 (191)
+|+.+.+++.++++++|+||++++. ....+++++|.+.| ++++..+
T Consensus 55 ~d~~~~~~~~~~~~~~d~vi~~~~~---~~~~~~~~~~~~~g-~~~~~~~ 100 (118)
T 3ic5_A 55 VDAKDEAGLAKALGGFDAVISAAPF---FLTPIIAKAAKAAG-AHYFDLT 100 (118)
T ss_dssp CCTTCHHHHHHHTTTCSEEEECSCG---GGHHHHHHHHHHTT-CEEECCC
T ss_pred ecCCCHHHHHHHHcCCCEEEECCCc---hhhHHHHHHHHHhC-CCEEEec
Confidence 4788999999999999999999853 44688999999999 8887643
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0029 Score=46.35 Aligned_cols=130 Identities=8% Similarity=0.047 Sum_probs=72.6
Q ss_pred cCcEEEEccCCCC----------------------cccHHHHHHH----HHHcCCccEEEc-CCcccCCCCCCCCCCchh
Q 038413 15 EVDVVISTVAYPQ----------------------FLDQLKIVHA----IKVAGNIKRFLP-SEFGCEEDRVRPLPPFEA 67 (191)
Q Consensus 15 g~d~V~~~~~~~~----------------------~~~~~~li~a----a~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~ 67 (191)
+.|++||+++... +.+..+++++ +++.+ ..++|. |+....... .+...
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~----~~~~~ 146 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPL----AYNPL 146 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC----TTCTT
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCC----CCchH
Confidence 6899999997421 1223344444 44666 667763 442211111 12346
Q ss_pred hHHHHHHHHHHHHh-------cCCCeEEEeccccccccc---ccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHH
Q 038413 68 YLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFV---NVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKV 137 (191)
Q Consensus 68 ~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 137 (191)
|..+|..++.+.+. .|+.++.++||++..... ......... .. +.........+.+.+|+|++++.+
T Consensus 147 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~--~~~~~~p~~r~~~pe~vA~~v~~l 223 (244)
T 1zmo_A 147 YGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPEL-RE--RVDRDVPLGRLGRPDEMGALITFL 223 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHH-HH--HHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHH-HH--HHhcCCCCCCCcCHHHHHHHHHHH
Confidence 77899888877543 488999999998766533 111000000 00 000000001356899999999999
Q ss_pred hcCcc--cCCceeEeec
Q 038413 138 INDPR--TCNRIVIYRP 152 (191)
Q Consensus 138 l~~~~--~~~~~~~i~~ 152 (191)
+.+.. .-++.+.+.|
T Consensus 224 ~s~~~~~~tG~~i~vdg 240 (244)
T 1zmo_A 224 ASRRAAPIVGQFFAFTG 240 (244)
T ss_dssp HTTTTGGGTTCEEEEST
T ss_pred cCccccCccCCEEEeCC
Confidence 88643 2377788874
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.025 Score=41.66 Aligned_cols=135 Identities=10% Similarity=0.133 Sum_probs=76.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|++++.++++ +.|++++.++... +.+ .+.++..+++.+ -++| .
T Consensus 54 ~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--G~IIni 131 (247)
T 3ged_A 54 GDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK--GRIINI 131 (247)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CcEEEE
Confidence 58999888877653 6899999998542 122 234444555544 2444 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce-
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK- 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 121 (191)
|| .+... . .....|..+|..+..+.+. .++....+.||++.......+. .... . ..+
T Consensus 132 sS~~~~~~-~----~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~-----~~~~----~-~~Pl 196 (247)
T 3ged_A 132 ASTRAFQS-E----PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFT-----QEDC----A-AIPA 196 (247)
T ss_dssp CCGGGTSC-C----TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CC-----HHHH----H-TSTT
T ss_pred eecccccC-C----CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHH-----HHHH----h-cCCC
Confidence 33 33221 1 1134577889887766542 3788888999976543211110 0000 0 000
Q ss_pred eeecchhhHHHHHHHHhcCcccCCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPRTCNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~ 152 (191)
.-+...+|||.+++-++.+.---|+.+.+.|
T Consensus 197 ~R~g~pediA~~v~fL~s~~~iTG~~i~VDG 227 (247)
T 3ged_A 197 GKVGTPKDISNMVLFLCQQDFITGETIIVDG 227 (247)
T ss_dssp SSCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHHhCCCCCCCeEEECc
Confidence 1134689999999888865322378888875
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0062 Score=44.96 Aligned_cols=144 Identities=8% Similarity=0.052 Sum_probs=81.4
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEE-cCC-cc
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFL-PSE-FG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v-~s~-~g 53 (191)
+|+.|++++.++++ +.|+++++++... +.+ .+.++..+++.|.--++| .|| .+
T Consensus 63 ~Dv~d~~~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~ 142 (247)
T 4hp8_A 63 IDFADPLAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS 142 (247)
T ss_dssp CCTTSTTTTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred ccCCCHHHHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh
Confidence 58899888887775 6899999998642 122 244444454443112555 343 33
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
... . .....|..+|..+..+.+. .|+....+.||++..+.............. +....-..-+-.
T Consensus 143 ~~g-~----~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~---~~~~~PlgR~g~ 214 (247)
T 4hp8_A 143 FQG-G----IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKA---ILERIPAGRWGH 214 (247)
T ss_dssp TSC-C----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHH---HHTTCTTSSCBC
T ss_pred CCC-C----CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHH---HHhCCCCCCCcC
Confidence 221 1 1234577899888766542 588899999998876543222110000000 000000011346
Q ss_pred hhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 127 EEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
.+|||.+++-+..+.. .. ++.+.+.|
T Consensus 215 peeiA~~v~fLaSd~a~~iTG~~i~VDG 242 (247)
T 4hp8_A 215 SEDIAGAAVFLSSAAADYVHGAILNVDG 242 (247)
T ss_dssp THHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHHhCchhcCCcCCeEEECc
Confidence 8999999988877643 22 77788874
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0019 Score=47.74 Aligned_cols=136 Identities=8% Similarity=0.011 Sum_probs=74.5
Q ss_pred CCCCCHHHHHHhhc---------cCc--EEEEccCCCC----------------------cccHHHHHHHHHHc------
Q 038413 1 GELDEHEKIVSILK---------EVD--VVISTVAYPQ----------------------FLDQLKIVHAIKVA------ 41 (191)
Q Consensus 1 gD~~d~~~l~~a~~---------g~d--~V~~~~~~~~----------------------~~~~~~li~aa~~~------ 41 (191)
+|++|.+++.++++ ..| ++||+++... +.+..++++++...
T Consensus 67 ~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 146 (259)
T 1oaa_A 67 ADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG 146 (259)
T ss_dssp CCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT
T ss_pred cCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 58999988887764 347 9999998521 12335556666532
Q ss_pred CCccEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEecccccccccccccCCCCCCceEEEe
Q 038413 42 GNIKRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVY 115 (191)
Q Consensus 42 g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~ 115 (191)
+ ..++|. ||...... ..+...|..+|..++.+.+. .++....++||++....................+
T Consensus 147 ~-~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 221 (259)
T 1oaa_A 147 L-SKTVVNISSLCALQP----YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKL 221 (259)
T ss_dssp C-EEEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHH
T ss_pred C-CceEEEEcCchhcCC----CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHH
Confidence 3 345663 44221111 12345677899988877654 2467777899987654322211000000000000
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCc
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
........+.+.+|+|+.++.++.+.
T Consensus 222 ~~~~p~~~~~~p~dvA~~v~~l~~~~ 247 (259)
T 1oaa_A 222 QKLKSDGALVDCGTSAQKLLGLLQKD 247 (259)
T ss_dssp HHHHHTTCSBCHHHHHHHHHHHHHHC
T ss_pred HHhhhcCCcCCHHHHHHHHHHHHhhc
Confidence 00000123578999999999888743
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.017 Score=42.58 Aligned_cols=143 Identities=10% Similarity=0.026 Sum_probs=76.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCCc------------c-----------cHHHHHHHHHHcC-CccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQF------------L-----------DQLKIVHAIKVAG-NIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~~------------~-----------~~~~li~aa~~~g-~vkr~v- 48 (191)
+|++|.+++.++++ +.|+++++++.... + ....+..++...- .--++|
T Consensus 65 ~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVn 144 (256)
T 4fs3_A 65 IDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVA 144 (256)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEE
Confidence 58999888876653 68999999885320 0 1112223332211 001344
Q ss_pred cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|| .+.. .. .....|..+|..+..+.+. .|+....+.||++........... ......+.. ..
T Consensus 145 isS~~~~~-~~----~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~---~~~~~~~~~-~~ 215 (256)
T 4fs3_A 145 TTYLGGEF-AV----QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGF---NTILKEIKE-RA 215 (256)
T ss_dssp EECGGGTS-CC----TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH---HHHHHHHHH-HS
T ss_pred Eecccccc-Cc----ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCC---HHHHHHHHh-cC
Confidence 233 2321 11 1234567889887766542 588899999998766433221110 000000000 00
Q ss_pred e-eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 121 K-AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 121 ~-~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
+ .-+...+|||++++-++.+.. . -|+.+.+.|
T Consensus 216 Pl~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDG 250 (256)
T 4fs3_A 216 PLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDS 250 (256)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence 0 113568999999998887643 2 278888874
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0035 Score=47.02 Aligned_cols=143 Identities=12% Similarity=0.087 Sum_probs=77.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHH----cCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKV----AGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~----~g~vkr~v-~ 49 (191)
+|++|++++.++++ +.|++++.++... +.+...+.+++.. .| ++| .
T Consensus 82 ~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G---~IIni 158 (273)
T 4fgs_A 82 ADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGS---SVVLT 158 (273)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE---EEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCC---eEEEE
Confidence 58999888887753 5799999998642 2333444554432 22 233 2
Q ss_pred -CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCC-CC-CceEEEecCCc
Q 038413 50 -SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPF-EP-HDDVVVYGNGE 119 (191)
Q Consensus 50 -s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~-~~-~~~~~~~~~g~ 119 (191)
|..+... . .....|..+|..+..+.+. .|+....+.||++............ .. ......+. ..
T Consensus 159 sS~~~~~~-~----~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~ 232 (273)
T 4fgs_A 159 GSTAGSTG-T----PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALA-AQ 232 (273)
T ss_dssp CCGGGGSC-C----TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHH-HH
T ss_pred eehhhccC-C----CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHH-hc
Confidence 3333211 1 1234677899888776553 4788888999987654322211000 00 00000000 00
Q ss_pred ce-eeecchhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 120 AK-AVFNYEEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 120 ~~-~~~i~~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
.+ .-+...+|||.+++-++.+.. .. |+.+.+.|
T Consensus 233 ~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDG 268 (273)
T 4fgs_A 233 VPMGRVGRAEEVAAAALFLASDDSSFVTGAELFVDG 268 (273)
T ss_dssp STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhcCccCCeEeECc
Confidence 00 114468999999998887643 22 78888875
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=95.87 E-value=0.056 Score=39.98 Aligned_cols=145 Identities=10% Similarity=0.067 Sum_probs=83.3
Q ss_pred CCCCCHHHHHHhhc----------cCcEEEEccCCCC------------------------cccHHHHHHHHHHcCCc--
Q 038413 1 GELDEHEKIVSILK----------EVDVVISTVAYPQ------------------------FLDQLKIVHAIKVAGNI-- 44 (191)
Q Consensus 1 gD~~d~~~l~~a~~----------g~d~V~~~~~~~~------------------------~~~~~~li~aa~~~g~v-- 44 (191)
+|++|.+++.++++ +.|++||+++... +.+..++++++...- .
T Consensus 63 ~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~ 141 (269)
T 2h7i_A 63 LDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIM-NPG 141 (269)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhh-ccC
Confidence 58999998888775 7899999998431 123355667765431 1
Q ss_pred cEEEc-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCc------
Q 038413 45 KRFLP-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHD------ 110 (191)
Q Consensus 45 kr~v~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~------ 110 (191)
.++|. |+.+. . . ......|..+|..++.+.+. .|+....++||++................
T Consensus 142 g~iv~iss~~~-~--~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 216 (269)
T 2h7i_A 142 GSIVGMDFDPS-R--A--MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQ 216 (269)
T ss_dssp EEEEEEECCCS-S--C--CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHH
T ss_pred CeEEEEcCccc-c--c--cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHH
Confidence 25553 33221 1 1 12234567889888766543 48999999999877643222100000000
Q ss_pred -eEEEecCCccee--eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 111 -DVVVYGNGEAKA--VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 111 -~~~~~~~g~~~~--~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
....+. ...+. .+...+|+|++++.++.+.. . -++.+.+.|
T Consensus 217 ~~~~~~~-~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 262 (269)
T 2h7i_A 217 LLEEGWD-QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADG 262 (269)
T ss_dssp HHHHHHH-HHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred HHHHhhh-ccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecC
Confidence 000000 00111 25678999999999987643 2 367788874
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.055 Score=44.35 Aligned_cols=147 Identities=9% Similarity=-0.038 Sum_probs=86.5
Q ss_pred CCCCCHHHHHHhhcc------CcEEEEccCCCC-------------------cccHHHHHHHHHHcCC----ccEEE-cC
Q 038413 1 GELDEHEKIVSILKE------VDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGN----IKRFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~g------~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~----vkr~v-~s 50 (191)
+|++|.+++.++++. .|+|||+++... +.+..++.+++..... ..+|| .|
T Consensus 322 ~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~S 401 (525)
T 3qp9_A 322 CDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFS 401 (525)
T ss_dssp CCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEEC
Confidence 599999999988864 699999998642 2455777777765430 24555 34
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh---cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecch
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA---VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~---~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
|....... .....|..+|..++.+..+ .|++++.+.||..... +.. ... .... +- ......+..
T Consensus 402 S~a~~~g~----~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tg-m~~--~~~-~~~~--~~---~~g~~~l~p 468 (525)
T 3qp9_A 402 SVAAIWGG----AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGS-RVT--EGA-TGER--LR---RLGLRPLAP 468 (525)
T ss_dssp EGGGTTCC----TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTS-GGG--SSH-HHHH--HH---HTTBCCBCH
T ss_pred CHHHcCCC----CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccc-ccc--chh-hHHH--HH---hcCCCCCCH
Confidence 42211111 1134577788888776543 5899999999987322 111 000 0000 00 011345789
Q ss_pred hhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHH
Q 038413 128 EDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWE 167 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~ 167 (191)
+++++++..++..+.. .+.+ -.+.+..+...+.
T Consensus 469 ee~a~~l~~~l~~~~~---~v~v----~~~dw~~~~~~~~ 501 (525)
T 3qp9_A 469 ATALTALDTALGHGDT---AVTI----ADVDWSSFAPGFT 501 (525)
T ss_dssp HHHHHHHHHHHHHTCS---EEEE----CCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCC---eEEE----EeCCHHHHHhhcc
Confidence 9999999999987532 2223 2345565555544
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=95.62 E-value=0.012 Score=44.33 Aligned_cols=130 Identities=7% Similarity=0.004 Sum_probs=70.9
Q ss_pred cCcEEEEccCCC-----C----------------cccHHHHHHHHHHcC-CccEEEc-CC-cccCCCCCCCCCCc-hhhH
Q 038413 15 EVDVVISTVAYP-----Q----------------FLDQLKIVHAIKVAG-NIKRFLP-SE-FGCEEDRVRPLPPF-EAYL 69 (191)
Q Consensus 15 g~d~V~~~~~~~-----~----------------~~~~~~li~aa~~~g-~vkr~v~-s~-~g~~~~~~~~~~~~-~~~~ 69 (191)
+.|++||+++.. . +.+..++++++...= .-.++|. |+ .+... . ... ..|.
T Consensus 119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~-~----~~~~~~Y~ 193 (297)
T 1d7o_A 119 SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI-I----PGYGGGMS 193 (297)
T ss_dssp CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC-C----TTCTTTHH
T ss_pred CCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccC-C----CCcchHHH
Confidence 689999999742 1 234566677776531 0125552 33 22211 1 112 3577
Q ss_pred HHHHHHHHHHH--------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCc
Q 038413 70 EKKRIVRRAIE--------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 70 ~~k~~~e~~l~--------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
.+|..++.+.+ ..|+..+.++||+........... ................+.+.+|+|++++.++.+.
T Consensus 194 asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~ 270 (297)
T 1d7o_A 194 SAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF---IDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPL 270 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH---HHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc---cHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCcc
Confidence 89988876643 158999999999876643221000 0000000000000013467999999999988754
Q ss_pred c-c-CCceeEeec
Q 038413 142 R-T-CNRIVIYRP 152 (191)
Q Consensus 142 ~-~-~~~~~~i~~ 152 (191)
. . -++.+.+.|
T Consensus 271 ~~~itG~~i~vdg 283 (297)
T 1d7o_A 271 ASAITGATIYVDN 283 (297)
T ss_dssp GTTCCSCEEEEST
T ss_pred ccCCCCCEEEECC
Confidence 3 2 367888875
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.024 Score=44.10 Aligned_cols=46 Identities=17% Similarity=0.231 Sum_probs=38.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~ 51 (191)
.|+.|.++|.++++++|+|++++++. ....++++|.++| ++++..+
T Consensus 63 ~d~~d~~~l~~~~~~~DvVi~~~p~~---~~~~v~~~~~~~g--~~yvD~s 108 (365)
T 3abi_A 63 VDASNFDKLVEVMKEFELVIGALPGF---LGFKSIKAAIKSK--VDMVDVS 108 (365)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECCCGG---GHHHHHHHHHHHT--CEEEECC
T ss_pred EecCCHHHHHHHHhCCCEEEEecCCc---ccchHHHHHHhcC--cceEeee
Confidence 48899999999999999999998764 3467999999999 4777533
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=94.99 E-value=0.25 Score=36.53 Aligned_cols=147 Identities=13% Similarity=0.069 Sum_probs=80.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------cc----cHHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------FL----DQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~~----~~~~li~aa~~~g~vkr~v 48 (191)
+|++|.+++.++++ +.|+++|+++... +. ..+.++..+++.+ --++|
T Consensus 57 ~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv 135 (261)
T 4h15_A 57 ADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVV 135 (261)
T ss_dssp CCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEE
Confidence 58899888776653 5899999987421 11 1344555666655 34555
Q ss_pred -cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc-----CCCCCC---ce
Q 038413 49 -PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL-----RPFEPH---DD 111 (191)
Q Consensus 49 -~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~-----~~~~~~---~~ 111 (191)
.|| .+... .. .....|..+|..+..+.+. .|+....+.||++......... ...... ..
T Consensus 136 ~isS~~~~~~-~~---~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~ 211 (261)
T 4h15_A 136 HVTSIQRVLP-LP---ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKK 211 (261)
T ss_dssp EECCGGGTSC-CT---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEEehhhccC-CC---CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHH
Confidence 333 33211 00 1123455788888766542 5889999999988764322110 000000 00
Q ss_pred EEEecCCcce-eeecchhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 112 VVVYGNGEAK-AVFNYEEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 112 ~~~~~~g~~~-~~~i~~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
.........+ .-+...+|||++++-++.+.. .. |+.+.+.|
T Consensus 212 ~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDG 255 (261)
T 4h15_A 212 IIMDGLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDG 255 (261)
T ss_dssp HHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECC
Confidence 0000000001 124568999999998886543 22 78888875
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=94.35 E-value=0.093 Score=40.09 Aligned_cols=33 Identities=12% Similarity=0.025 Sum_probs=24.6
Q ss_pred hhHHHHHHHHHHHH-------h-cCCCeEEEeccccccccc
Q 038413 67 AYLEKKRIVRRAIE-------A-VEIPYTFVSANCYGAYFV 99 (191)
Q Consensus 67 ~~~~~k~~~e~~l~-------~-~~~~~tilrp~~~~~~~~ 99 (191)
.|..+|..++.+.+ . .|+....+.||++.....
T Consensus 185 ~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~ 225 (329)
T 3lt0_A 185 GMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAA 225 (329)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhH
Confidence 57788887776643 3 589999999998876543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=93.72 E-value=0.12 Score=39.19 Aligned_cols=86 Identities=5% Similarity=-0.046 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHHHH-------h-cCCCeEEEecccccccccccccCC---CCCCceEEEecCCcceeeecchhhHHHHHH
Q 038413 67 AYLEKKRIVRRAIE-------A-VEIPYTFVSANCYGAYFVNVLLRP---FEPHDDVVVYGNGEAKAVFNYEEDIAKCTI 135 (191)
Q Consensus 67 ~~~~~k~~~e~~l~-------~-~~~~~tilrp~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~ 135 (191)
.|..+|..++.+.+ . .|+....++||++........... ..................+...+|+|++++
T Consensus 205 ~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~ 284 (319)
T 2ptg_A 205 GMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAAL 284 (319)
T ss_dssp --------THHHHHHHHHHHHHHHCCEEEEEEECCCC-------------------------------CCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHH
Confidence 46677776665533 2 589999999998766432221100 000000000000000113467899999999
Q ss_pred HHhcCcc-c-CCceeEeec
Q 038413 136 KVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 136 ~~l~~~~-~-~~~~~~i~~ 152 (191)
.++.+.. . -++.+.+.|
T Consensus 285 ~L~s~~~~~itG~~i~vdG 303 (319)
T 2ptg_A 285 FLLSPLARAVTGATLYVDN 303 (319)
T ss_dssp HHTSGGGTTCCSCEEEEST
T ss_pred HHhCcccCCccCCEEEECC
Confidence 9887643 2 367888875
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=93.45 E-value=2.9 Score=34.77 Aligned_cols=140 Identities=7% Similarity=-0.005 Sum_probs=81.6
Q ss_pred ccCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEE-cCC-cccCCCCCCCCCCchhh
Q 038413 14 KEVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFL-PSE-FGCEEDRVRPLPPFEAY 68 (191)
Q Consensus 14 ~g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v-~s~-~g~~~~~~~~~~~~~~~ 68 (191)
.+.|+++|+++... +.+ ++.++..+++.+ --++| .|| .|... . .....|
T Consensus 394 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~-~----~~~~~Y 467 (604)
T 2et6_A 394 GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYG-N----FGQANY 467 (604)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSC-C----TTBHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccC-C----CCChhH
Confidence 46899999998532 122 344455555554 34665 343 33211 1 113457
Q ss_pred HHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCc
Q 038413 69 LEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 69 ~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
..+|..+..+.+ ..|+....+.||. ........ ... ........+|+|.+++.++.+.
T Consensus 468 ~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~------------~~~--~~~~~~~pe~vA~~v~~L~s~~ 532 (604)
T 2et6_A 468 SSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSI------------MRE--QDKNLYHADQVAPLLVYLGTDD 532 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-----------------------CCSSCGGGTHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccccc------------Cch--hhccCCCHHHHHHHHHHHhCCc
Confidence 788988776644 2588888899984 21110000 000 0123357899999988877653
Q ss_pred c-cCCceeEeecC----------------CCccCHHHHHHHHHHHhCCce
Q 038413 142 R-TCNRIVIYRPQ----------------TNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 142 ~-~~~~~~~i~~~----------------~~~~t~~e~~~~~~~~~g~~~ 174 (191)
. .-++.+.+.|+ +..++..++.+.+.+....+-
T Consensus 533 ~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 582 (604)
T 2et6_A 533 VPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFTT 582 (604)
T ss_dssp CCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCSS
T ss_pred cCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcccc
Confidence 2 23667776641 234799999999999988753
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=91.71 E-value=0.29 Score=38.64 Aligned_cols=47 Identities=19% Similarity=0.296 Sum_probs=36.7
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCC
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~ 51 (191)
+|+.|.+++.+++++ +|+||+++++. ....++++|.++| +..+-.+.
T Consensus 60 ~D~~d~~~l~~~l~~~~~DvVin~ag~~---~~~~v~~a~l~~g-~~vvD~a~ 108 (405)
T 4ina_A 60 VDADSIEELVALINEVKPQIVLNIALPY---QDLTIMEACLRTG-VPYLDTAN 108 (405)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECSCGG---GHHHHHHHHHHHT-CCEEESSC
T ss_pred ecCCCHHHHHHHHHhhCCCEEEECCCcc---cChHHHHHHHHhC-CCEEEecC
Confidence 478899999999987 89999998753 2468899999999 65443433
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=91.62 E-value=0.19 Score=38.47 Aligned_cols=42 Identities=12% Similarity=0.194 Sum_probs=33.2
Q ss_pred HHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEE
Q 038413 6 HEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v 48 (191)
.+++.++++|+|+||++++.+. ...++++++++++.+ .+.++
T Consensus 67 t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~v 121 (326)
T 1smk_A 67 QQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIV 121 (326)
T ss_dssp HHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred CCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEE
Confidence 4577889999999999998543 256788999999988 76544
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=91.16 E-value=0.53 Score=30.59 Aligned_cols=47 Identities=13% Similarity=0.207 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHh-hccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSI-LKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a-~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
+|..|.+.+.++ +.++|+|+++++.. ......+..++++.+ +++++.
T Consensus 55 ~d~~~~~~l~~~~~~~~d~vi~~~~~~-~~~~~~~~~~~~~~~-~~~ii~ 102 (144)
T 2hmt_A 55 ANATEENELLSLGIRNFEYVIVAIGAN-IQASTLTTLLLKELD-IPNIWV 102 (144)
T ss_dssp CCTTCHHHHHTTTGGGCSEEEECCCSC-HHHHHHHHHHHHHTT-CSEEEE
T ss_pred eCCCCHHHHHhcCCCCCCEEEECCCCc-hHHHHHHHHHHHHcC-CCeEEE
Confidence 577788888876 78999999988742 233456778888899 887764
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=90.99 E-value=0.33 Score=38.95 Aligned_cols=45 Identities=22% Similarity=0.291 Sum_probs=34.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------------cccHHHHHHHHHHcCCccE
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------------FLDQLKIVHAIKVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------------~~~~~~li~aa~~~g~vkr 46 (191)
+|+.|.+++.++++++|+|+|+++... .....+++++|+++| ++.
T Consensus 54 ~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG-v~~ 119 (450)
T 1ff9_A 54 LDVNDDAALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG-ITV 119 (450)
T ss_dssp CCTTCHHHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT-CEE
T ss_pred eecCCHHHHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC-CeE
Confidence 478888899999999999999998531 023578889999999 753
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=90.76 E-value=0.14 Score=39.32 Aligned_cols=43 Identities=21% Similarity=0.176 Sum_probs=32.2
Q ss_pred HHHHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHc-CCcc-EEEc
Q 038413 6 HEKIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVA-GNIK-RFLP 49 (191)
Q Consensus 6 ~~~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~-g~vk-r~v~ 49 (191)
..++.++++|+|+|||+++... ...++++++++++. + .+ +++.
T Consensus 74 ~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~-p~a~ii~ 131 (329)
T 1b8p_A 74 HADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVAS-RNIKVLV 131 (329)
T ss_dssp ESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSC-TTCEEEE
T ss_pred ecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEE
Confidence 3567789999999999998643 24468899999987 4 45 6653
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=90.32 E-value=0.83 Score=39.37 Aligned_cols=127 Identities=9% Similarity=0.066 Sum_probs=74.0
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEE-cCC-cc
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFL-PSE-FG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v-~s~-~g 53 (191)
+|++|.+++.++++ ..|+|||+++... +.+..++.+++ ... . +|| .|| .+
T Consensus 591 ~Dvsd~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~-~~~-l-~iV~~SS~ag 667 (795)
T 3slk_A 591 CDVADRETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELI-DPD-V-ALVLFSSVSG 667 (795)
T ss_dssp CCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHS-CTT-S-EEEEEEETHH
T ss_pred eecCCHHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHH-hhC-C-EEEEEccHHh
Confidence 59999999998875 3699999998642 34567777776 233 4 555 344 22
Q ss_pred cCCCCCCCCCC-chhhHHHHHHHHHH---HHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhh
Q 038413 54 CEEDRVRPLPP-FEAYLEKKRIVRRA---IEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEED 129 (191)
Q Consensus 54 ~~~~~~~~~~~-~~~~~~~k~~~e~~---l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~D 129 (191)
... .| ...|..+|.-.+.. +...|++.+.+.||++.+.++....... .... +. ......+..++
T Consensus 668 ~~g------~~g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~-~~~~--~~---~~g~~~l~~~e 735 (795)
T 3slk_A 668 VLG------SGGQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREA-EQDR--LA---RSGLLPISTEE 735 (795)
T ss_dssp HHT------CSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHH-HHHH--HH---HTTBCCCCHHH
T ss_pred cCC------CCCCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHH-HHHH--HH---hcCCCCCCHHH
Confidence 211 12 23466677544333 3347999999999987654322110000 0000 00 01134467788
Q ss_pred HHHHHHHHhcCcc
Q 038413 130 IAKCTIKVINDPR 142 (191)
Q Consensus 130 va~~~~~~l~~~~ 142 (191)
....+..++..++
T Consensus 736 ~~~~~~~~l~~~~ 748 (795)
T 3slk_A 736 GLSQFDAACGGAH 748 (795)
T ss_dssp HHHHHHHHHTSSC
T ss_pred HHHHHHHHHhCCC
Confidence 8888888887654
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=88.11 E-value=0.44 Score=36.20 Aligned_cols=40 Identities=25% Similarity=0.195 Sum_probs=30.5
Q ss_pred HHHHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEE
Q 038413 8 KIVSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 8 ~l~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v 48 (191)
++.++++|+|+|||+++.+. ...++++++++++.+ -.+++
T Consensus 67 ~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vl 119 (313)
T 1hye_A 67 ENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIF 119 (313)
T ss_dssp TCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEE
T ss_pred chHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEE
Confidence 36778999999999998653 355789999999986 33444
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=87.60 E-value=11 Score=31.28 Aligned_cols=138 Identities=9% Similarity=0.016 Sum_probs=79.1
Q ss_pred ccCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEE-cCC-cccCCCCCCCCCCchhh
Q 038413 14 KEVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFL-PSE-FGCEEDRVRPLPPFEAY 68 (191)
Q Consensus 14 ~g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v-~s~-~g~~~~~~~~~~~~~~~ 68 (191)
...|++++++|... +.+ ++.++..+++.+ --++| .|| .+... . .....|
T Consensus 90 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~-~----~~~~~Y 163 (604)
T 2et6_A 90 GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYG-N----FGQANY 163 (604)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC-C----TTBHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCC-C----CCchHH
Confidence 46899999998531 112 344555555554 34666 343 33211 0 113357
Q ss_pred HHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCc
Q 038413 69 LEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 69 ~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
..+|..+..+.+ ..|+....+.|+. ........ .. .........+|+|.+++.++.+.
T Consensus 164 ~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~T~m~~~~----~~----------~~~~~~~~pe~vA~~v~~L~s~~ 228 (604)
T 2et6_A 164 ASAKSALLGFAETLAKEGAKYNIKANAIAPLA-RSRMTESI----MP----------PPMLEKLGPEKVAPLVLYLSSAE 228 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCHHHHTT----SC----------HHHHTTCSHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-cCcccccc----CC----------hhhhccCCHHHHHHHHHHHhCCc
Confidence 788988876654 2578888899973 21111100 00 00112347899999999888765
Q ss_pred cc-CCceeEeecC-----------------CCccCHHHHHHHHHHHhCC
Q 038413 142 RT-CNRIVIYRPQ-----------------TNIISQLELISLWEQKTGR 172 (191)
Q Consensus 142 ~~-~~~~~~i~~~-----------------~~~~t~~e~~~~~~~~~g~ 172 (191)
.. -++.+.+.|+ ++..+..++.+.+.++...
T Consensus 229 ~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 277 (604)
T 2et6_A 229 NELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY 277 (604)
T ss_dssp CCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred ccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence 32 2566666531 1346889999988887643
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=87.26 E-value=0.99 Score=29.46 Aligned_cols=46 Identities=20% Similarity=0.136 Sum_probs=35.1
Q ss_pred CCCCCHHHHHHh-hccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSI-LKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a-~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
||.+|++.+.++ +.++|+|+.+++ +......+...+++.+ ..+++.
T Consensus 55 gd~~~~~~l~~~~~~~~d~vi~~~~--~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 55 ADPTDESFYRSLDLEGVSAVLITGS--DDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp CCTTCHHHHHHSCCTTCSEEEECCS--CHHHHHHHHHHHHHHC-CCCEEE
T ss_pred CCCCCHHHHHhCCcccCCEEEEecC--CHHHHHHHHHHHHHhC-CceEEE
Confidence 688899998887 468999999877 3344566778888888 777764
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=87.25 E-value=1.1 Score=28.88 Aligned_cols=46 Identities=15% Similarity=0.216 Sum_probs=33.2
Q ss_pred CCCCCHHHHHHh-hccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSI-LKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a-~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~ 49 (191)
+|..+.+.+.++ +.++|+|+++++.. .....+..+++..+ +++++.
T Consensus 54 ~d~~~~~~l~~~~~~~~d~vi~~~~~~--~~~~~~~~~~~~~~-~~~ii~ 100 (140)
T 1lss_A 54 GDCTKIKTLEDAGIEDADMYIAVTGKE--EVNLMSSLLAKSYG-INKTIA 100 (140)
T ss_dssp SCTTSHHHHHHTTTTTCSEEEECCSCH--HHHHHHHHHHHHTT-CCCEEE
T ss_pred cCCCCHHHHHHcCcccCCEEEEeeCCc--hHHHHHHHHHHHcC-CCEEEE
Confidence 466777777765 67999999987643 33355677888888 777774
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=85.81 E-value=0.74 Score=34.76 Aligned_cols=38 Identities=16% Similarity=0.025 Sum_probs=29.9
Q ss_pred HHhhccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEE
Q 038413 10 VSILKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 10 ~~a~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v 48 (191)
.++++|+|+|||+++... ...++++++++++.+ .+.++
T Consensus 65 ~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~v 115 (303)
T 1o6z_A 65 YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYIS 115 (303)
T ss_dssp GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEE
T ss_pred HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEE
Confidence 457899999999998653 246788999999988 76654
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=85.76 E-value=1.3 Score=29.44 Aligned_cols=46 Identities=9% Similarity=0.116 Sum_probs=33.8
Q ss_pred CCCCCHHHHHHh-hccCcEEEEccCCCCcccHHHHHHHHHHc-CCccEEEc
Q 038413 1 GELDEHEKIVSI-LKEVDVVISTVAYPQFLDQLKIVHAIKVA-GNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a-~~g~d~V~~~~~~~~~~~~~~li~aa~~~-g~vkr~v~ 49 (191)
||.+|++.|.++ +.++|+|+.+++.. .....+...+++. + ..+++.
T Consensus 56 gd~~~~~~l~~a~i~~ad~vi~~~~~d--~~n~~~~~~a~~~~~-~~~ii~ 103 (153)
T 1id1_A 56 GDSNDSSVLKKAGIDRCRAILALSDND--ADNAFVVLSAKDMSS-DVKTVL 103 (153)
T ss_dssp SCTTSHHHHHHHTTTTCSEEEECSSCH--HHHHHHHHHHHHHTS-SSCEEE
T ss_pred cCCCCHHHHHHcChhhCCEEEEecCCh--HHHHHHHHHHHHHCC-CCEEEE
Confidence 688899999887 88999999987743 3345566677765 6 666653
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=82.96 E-value=2.4 Score=34.14 Aligned_cols=26 Identities=27% Similarity=0.487 Sum_probs=22.2
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYP 26 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~ 26 (191)
+|+.|.+++.++++++|+||++++..
T Consensus 74 ~D~~d~~~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 74 LDVTDDSALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp CCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred EecCCHHHHHHHHcCCCEEEECCchh
Confidence 37788889999999999999998853
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=82.66 E-value=2.1 Score=30.62 Aligned_cols=45 Identities=11% Similarity=0.226 Sum_probs=34.1
Q ss_pred CCCCCHHHHHHh-hccCcEEEEccCCCCcccHHHHHHHHHHcCCcc-EEE
Q 038413 1 GELDEHEKIVSI-LKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIK-RFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a-~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vk-r~v 48 (191)
||.+|++.|.++ +.++|.|+.+++.. .....+...+++.+ .+ +++
T Consensus 56 gd~~~~~~l~~a~i~~ad~vi~~~~~d--~~n~~~~~~a~~~~-~~~~ii 102 (234)
T 2aef_A 56 GDPTRVSDLEKANVRGARAVIVDLESD--SETIHCILGIRKID-ESVRII 102 (234)
T ss_dssp SCTTCHHHHHHTTCTTCSEEEECCSCH--HHHHHHHHHHHHHC-SSSEEE
T ss_pred cCCCCHHHHHhcCcchhcEEEEcCCCc--HHHHHHHHHHHHHC-CCCeEE
Confidence 688999999888 78999999987642 33455667788887 65 655
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=82.02 E-value=3.1 Score=27.60 Aligned_cols=46 Identities=13% Similarity=0.231 Sum_probs=32.7
Q ss_pred CCCCCHHHHHHh-hccCcEEEEccCCCCcccHHHHHHHHHH-cCCccEEEc
Q 038413 1 GELDEHEKIVSI-LKEVDVVISTVAYPQFLDQLKIVHAIKV-AGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a-~~g~d~V~~~~~~~~~~~~~~li~aa~~-~g~vkr~v~ 49 (191)
+|..+.+.+.++ +.++|+||.+++.. .....++..++. .+ ..+++.
T Consensus 69 ~d~~~~~~l~~~~~~~ad~Vi~~~~~~--~~~~~~~~~~~~~~~-~~~iv~ 116 (155)
T 2g1u_A 69 GDAAEFETLKECGMEKADMVFAFTNDD--STNFFISMNARYMFN-VENVIA 116 (155)
T ss_dssp SCTTSHHHHHTTTGGGCSEEEECSSCH--HHHHHHHHHHHHTSC-CSEEEE
T ss_pred ecCCCHHHHHHcCcccCCEEEEEeCCc--HHHHHHHHHHHHHCC-CCeEEE
Confidence 456677778776 78999999988743 344566777777 66 667664
|
| >3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A | Back alignment and structure |
|---|
Probab=80.35 E-value=2.5 Score=30.79 Aligned_cols=49 Identities=10% Similarity=0.076 Sum_probs=36.1
Q ss_pred HHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEEcCCcccCC
Q 038413 7 EKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEE 56 (191)
Q Consensus 7 ~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v~s~~g~~~ 56 (191)
..+.+|+...+..+--+|....+....+++.|.++| |+++++-.|+.-.
T Consensus 200 ~avAkAca~~g~~lEPTGGIdl~Nf~~I~~i~l~aG-v~~viPHIYsSII 248 (275)
T 3m6y_A 200 RAVAKACAEEGFALEPTGGIDKENFETIVRIALEAN-VEQVIPHVYSSII 248 (275)
T ss_dssp HHHHHHHHHHTCEEEEBSSCCTTTHHHHHHHHHHTT-CSCBCCEECGGGB
T ss_pred HHHHHHHHHcCceECCCCCccHhHHHHHHHHHHHcC-CCeecccccceec
Confidence 456666665555676677666788899999999999 9999875555433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 191 | ||||
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 2e-14 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 2e-14 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-04 |
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 67.9 bits (164), Expect = 2e-14
Identities = 72/170 (42%), Positives = 105/170 (61%), Gaps = 5/170 (2%)
Query: 25 YPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRV-RPLPPFEAYLEKKRIVRRAIEAVE 83
L+QLK+V AIK AGNIKRFLPSEFG + D + L P KR VRRAIEA
Sbjct: 89 SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAAS 148
Query: 84 IPYTFVSANCYGAYFVNVLLRPFE----PHDDVVVYGNGEAKAVFNYEEDIAKCTIKVIN 139
IPYT+VS+N + YF L + P D V++YG+G K ++ E+D+ TIK I+
Sbjct: 149 IPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSID 208
Query: 140 DPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQ 189
DP+T N+ + RP NI+SQ E+I +WE+ + ++ +++IS ++ + +
Sbjct: 209 DPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMK 258
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 67.5 bits (163), Expect = 2e-14
Identities = 86/192 (44%), Positives = 121/192 (63%), Gaps = 3/192 (1%)
Query: 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR 60
G +D+H +V +K VDVVISTV Q Q+ I+ AIK G +KRF PSEFG + D V
Sbjct: 62 GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVH 121
Query: 61 PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFE---PHDDVVVYGN 117
+ P ++ E K VRRAIEA IPYT+VS+NC+ YF+ L + P D VV+ G+
Sbjct: 122 AVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGD 181
Query: 118 GEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRV 177
G A+ VF EEDI TIK ++DPRT N+ + R N +S EL++LWE+K ++ ++
Sbjct: 182 GNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKA 241
Query: 178 HISEEELVKLSQ 189
++ EEE++KL
Sbjct: 242 YVPEEEVLKLIA 253
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 38.6 bits (89), Expect = 2e-04
Identities = 19/132 (14%), Positives = 39/132 (29%), Gaps = 9/132 (6%)
Query: 55 EEDRVRPLPPF-EAYLEKKRIVRRAIEAVEIPYTFV-SANCYGAY-----FVNVLLRPFE 107
E + P P+ + + R + N YG Y + + +
Sbjct: 141 ESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLL 200
Query: 108 PHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWE 167
+ +YG+G + + +D + V+ R I ++ EL +
Sbjct: 201 DGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIG--GGLELTNRELTGILL 258
Query: 168 QKTGRSFKRVHI 179
G + V
Sbjct: 259 DSLGADWSSVRK 270
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 191 | |||
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.93 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.92 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.89 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.85 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.83 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.82 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.82 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.8 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.8 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.79 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.77 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.76 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.76 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.74 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.72 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.7 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.69 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.69 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.67 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.67 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.66 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.66 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.64 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.64 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.62 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.6 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.49 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.37 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.3 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.26 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.82 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.8 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.77 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 97.76 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 97.72 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 97.59 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.58 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 97.58 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.56 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.54 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.52 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.52 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 97.5 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 97.46 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.44 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.4 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 97.4 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 97.38 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 97.37 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.36 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 97.36 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 97.27 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 97.27 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 97.23 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.21 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 97.19 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 97.17 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 97.17 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.15 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 97.1 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.08 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 97.06 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 97.02 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 96.91 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.89 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 96.86 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 96.84 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 96.73 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 96.6 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 96.55 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 96.42 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 96.36 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 96.35 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 96.32 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 96.3 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 96.16 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 95.14 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 95.02 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 94.59 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 93.45 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 93.41 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 93.3 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 93.01 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 93.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 92.79 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 92.7 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 92.41 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 87.14 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 85.74 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 85.39 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 83.59 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 82.81 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 82.01 |
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.93 E-value=2.2e-24 Score=163.55 Aligned_cols=190 Identities=45% Similarity=0.742 Sum_probs=155.3
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----cccHHHHHHHHHHcCCccEEEcCCcccCCCCCC-CCCCchhhHHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----FLDQLKIVHAIKVAGNIKRFLPSEFGCEEDRVR-PLPPFEAYLEKKRIV 75 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----~~~~~~li~aa~~~g~vkr~v~s~~g~~~~~~~-~~~~~~~~~~~k~~~ 75 (191)
||+.|.+.+.++++++++++++++... .....+++++|++++..++++.|++|....... ...|...+...+..+
T Consensus 61 ~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~ 140 (312)
T d1qyda_ 61 ASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKV 140 (312)
T ss_dssp CCSSCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHH
T ss_pred eecccchhhhhhccCcchhhhhhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHH
Confidence 689999999999999999999887543 567788999999887467777888887654432 234556677889999
Q ss_pred HHHHHhcCCCeEEEecccccccccccccC----CCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 76 RRAIEAVEIPYTFVSANCYGAYFVNVLLR----PFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 76 e~~l~~~~~~~tilrp~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
+++..+.+++|+++||+.+++++.+.... .....+.+.++++|+.++++|+++|+|++++.++.+++..++.+++.
T Consensus 141 ~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~ 220 (312)
T d1qyda_ 141 RRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIR 220 (312)
T ss_dssp HHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECC
T ss_pred HHhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEe
Confidence 99999999999999999999876544321 22256778888999999999999999999999999998888876654
Q ss_pred cCCCccCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 152 PQTNIISQLELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 152 ~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
++++.+|++|+++.+++++|++.+++.+|.+++.+.+++
T Consensus 221 ~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~~~~~~~~~ 259 (312)
T d1qyda_ 221 PPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKD 259 (312)
T ss_dssp CGGGEEEHHHHHHHHHHHHTCCCEECCBCSHHHHHHHTT
T ss_pred CCCcCCCHHHHHHHHHHHHCCCCeEEECCHHHHHHHHHh
Confidence 336789999999999999999999999999998877653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.92 E-value=6.5e-24 Score=160.10 Aligned_cols=189 Identities=44% Similarity=0.717 Sum_probs=155.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCCcccHHHHHHHHHHcCCccEEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQFLDQLKIVHAIKVAGNIKRFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAI 79 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~~~~~~~li~aa~~~g~vkr~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l 79 (191)
+|+.+...+.+++++++.|+|+++.....+..+++++++.++ +++++ .|+++...+......+...+...+...+.++
T Consensus 62 ~d~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (307)
T d1qyca_ 62 GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVG-TVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAI 140 (307)
T ss_dssp CCTTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHC-CCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHH
T ss_pred eecccchhhhhhhhhceeeeecccccccchhhHHHHHHHHhc-cccceeeeccccccccccccccccccccccccccchh
Confidence 588999999999999999999998888888899999999998 66654 5777665544333334455667788899999
Q ss_pred HhcCCCeEEEecccccccccccccC---CCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCc
Q 038413 80 EAVEIPYTFVSANCYGAYFVNVLLR---PFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNI 156 (191)
Q Consensus 80 ~~~~~~~tilrp~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~ 156 (191)
.+.+++|+++||+.+++++...+.. .....+...+++.++.++++|+++|+|++++.++++++..++.+++.++++.
T Consensus 141 ~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~ 220 (307)
T d1qyca_ 141 EAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANT 220 (307)
T ss_dssp HHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGE
T ss_pred hccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCc
Confidence 9999999999999999876554332 2235667888888999999999999999999999999877887765433689
Q ss_pred cCHHHHHHHHHHHhCCceEEEEcCHHHHHHHhhh
Q 038413 157 ISQLELISLWEQKTGRSFKRVHISEEELVKLSQI 190 (191)
Q Consensus 157 ~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (191)
+|+.|+++++++++|++++++.+|.+++.+.+.+
T Consensus 221 ~s~~ei~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 254 (307)
T d1qyca_ 221 LSLNELVALWEKKIDKTLEKAYVPEEEVLKLIAD 254 (307)
T ss_dssp EEHHHHHHHHHHHTTSCCEEEEECHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHCCCCcEEECCHHHHHHHHHh
Confidence 9999999999999999999999999999877653
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.8e-22 Score=145.29 Aligned_cols=141 Identities=13% Similarity=0.133 Sum_probs=112.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC--------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchhhHHH
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ--------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEAYLEK 71 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~--------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~~~~~ 71 (191)
||+.|.+++.++++|+|+||++++... .+++.+++++|+++| ++|||. |+.+...+.........+++..
T Consensus 53 gD~~d~~~l~~al~~~d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~~~~~~~~~~~ 131 (205)
T d1hdoa_ 53 GDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDD 131 (205)
T ss_dssp SCTTSHHHHHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHH
T ss_pred ccccchhhHHHHhcCCCEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCccccccccccchH
Confidence 799999999999999999999998643 356789999999999 999885 5544433222211234567888
Q ss_pred HHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEee
Q 038413 72 KRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYR 151 (191)
Q Consensus 72 k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~ 151 (191)
|.++|+++++++++||++||+.+++.. ..+...++.++..+..+|+++|+|++++.++++|++.++.+.++
T Consensus 132 ~~~~e~~l~~~~~~~tiirp~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s 202 (205)
T d1hdoa_ 132 HIRMHKVLRESGLKYVAVMPPHIGDQP---------LTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS 202 (205)
T ss_dssp HHHHHHHHHHTCSEEEEECCSEEECCC---------CCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred HHHHHHHHHhcCCceEEEecceecCCC---------CcccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence 999999999999999999999887642 22334555567777889999999999999999998889988886
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.85 E-value=1.6e-20 Score=144.98 Aligned_cols=178 Identities=13% Similarity=0.149 Sum_probs=134.2
Q ss_pred CCCCCH-HHHHHhhccCcEEEEccCCCC---cccHHHHHHHHHHcCCccE-EEcCCcccCCCCCCCCCCchhhHHHHHHH
Q 038413 1 GELDEH-EKIVSILKEVDVVISTVAYPQ---FLDQLKIVHAIKVAGNIKR-FLPSEFGCEEDRVRPLPPFEAYLEKKRIV 75 (191)
Q Consensus 1 gD~~d~-~~l~~a~~g~d~V~~~~~~~~---~~~~~~li~aa~~~g~vkr-~v~s~~g~~~~~~~~~~~~~~~~~~k~~~ 75 (191)
||+.|. +.+..++.++|++++...... .....++++||+++| ++| ++.|+.+...... ..+..++..+|...
T Consensus 56 gD~~d~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~--~~~~~~~~~~k~~~ 132 (350)
T d1xgka_ 56 GPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYG--PWPAVPMWAPKFTV 132 (350)
T ss_dssp SCCTTCHHHHHHHHTTCSEEEECCCSTTSCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTS--SCCCCTTTHHHHHH
T ss_pred eeCCCcHHHHHHHhcCCceEEeecccccchhhhhhhHHHHHHHHhC-CCceEEEeeccccccCC--cccchhhhhhHHHH
Confidence 688884 457788999999998766433 566799999999999 655 5566644322211 12345677899999
Q ss_pred HHHHHhcCCCeEEEecccccccccccccCC----CCC--CceEEEecCCcceeeecch-hhHHHHHHHHhcCc-c-cCCc
Q 038413 76 RRAIEAVEIPYTFVSANCYGAYFVNVLLRP----FEP--HDDVVVYGNGEAKAVFNYE-EDIAKCTIKVINDP-R-TCNR 146 (191)
Q Consensus 76 e~~l~~~~~~~tilrp~~~~~~~~~~~~~~----~~~--~~~~~~~~~g~~~~~~i~~-~Dva~~~~~~l~~~-~-~~~~ 146 (191)
++++.+++++|+++||+.|++++....... ... ......+.+++.++++++. +|+|++++.++.++ + ..|+
T Consensus 133 ~~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~ 212 (350)
T d1xgka_ 133 ENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGH 212 (350)
T ss_dssp HHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTC
T ss_pred HHHHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCe
Confidence 999999999999999999998754322110 112 2344556677888999886 79999999999764 3 4688
Q ss_pred eeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHH
Q 038413 147 IVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEE 183 (191)
Q Consensus 147 ~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~ 183 (191)
.++++ ++.+|+.|+++++++++|++++++++|.++
T Consensus 213 ~~~~~--g~~~T~~eia~~l~~~~G~~v~~~~vp~~~ 247 (350)
T d1xgka_ 213 RIALT--FETLSPVQVCAAFSRALNRRVTYVQVPKVE 247 (350)
T ss_dssp EEEEC--SEEECHHHHHHHHHHHHTSCEEEEECSSCC
T ss_pred EEEEe--CCcCCHHHHHHHHHHHHCCcceEEECCHHH
Confidence 88887 578999999999999999999999998653
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.83 E-value=7.8e-20 Score=139.63 Aligned_cols=172 Identities=15% Similarity=0.215 Sum_probs=136.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-C---CcccCC----C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-S---EFGCEE----D 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s---~~g~~~----~ 57 (191)
+|+.+...+.....+.|.|+|+++... +.++.+++++|++.+ +++||. | .||... .
T Consensus 62 ~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~~~~~ 140 (322)
T d1r6da_ 62 GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWT 140 (322)
T ss_dssp CCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBC
T ss_pred eccccchhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCCCCCC
Confidence 577888888888899999999987652 467899999999999 999884 3 254322 1
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc------ccCCCCCCceEEEecCCcceeeecch
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV------LLRPFEPHDDVVVYGNGEAKAVFNYE 127 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~i~~ 127 (191)
+.....|.++|..+|..+|..++. .+++++++||+..+|+.... +......++.+.++++|.+.++|+|+
T Consensus 141 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v 220 (322)
T d1r6da_ 141 ESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHT 220 (322)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEH
Confidence 222345777888999999988864 58999999999988854211 11111256678899999999999999
Q ss_pred hhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceE
Q 038413 128 EDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 128 ~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~ 175 (191)
+|+|+++..+++++. .++.+++++ ++.+|..|+++.+.+.+|.+.+
T Consensus 221 ~D~a~ai~~~~~~~~-~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~ 266 (322)
T d1r6da_ 221 DDHCRGIALVLAGGR-AGEIYHIGG-GLELTNRELTGILLDSLGADWS 266 (322)
T ss_dssp HHHHHHHHHHHHHCC-TTCEEEECC-CCEEEHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHhCCC-CCCeeEEee-cccchhHHHHHHHHHHhCCCcc
Confidence 999999999998865 468999995 8999999999999999998744
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=7.7e-20 Score=141.67 Aligned_cols=172 Identities=16% Similarity=0.185 Sum_probs=131.0
Q ss_pred CCCCCHHHHHHhhccC--cEEEEccCCCC---------------cccHHHHHHHHHHcCCcc---EEEc-C---CcccCC
Q 038413 1 GELDEHEKIVSILKEV--DVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIK---RFLP-S---EFGCEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~--d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vk---r~v~-s---~~g~~~ 56 (191)
||+.|.+++.++++++ |+|||+++... +.++.||+++|++.+ ++ |||. | .||...
T Consensus 62 ~Dl~d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~ 140 (357)
T d1db3a_ 62 GDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQ 140 (357)
T ss_dssp CCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCC
T ss_pred eecCCHHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCC
Confidence 6999999999999865 99999998642 466899999999987 54 6874 3 265422
Q ss_pred C----CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc-c----c-----CCCCCCceEEEecCC
Q 038413 57 D----RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV-L----L-----RPFEPHDDVVVYGNG 118 (191)
Q Consensus 57 ~----~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~-~----~-----~~~~~~~~~~~~~~g 118 (191)
. +.....|..+|..+|..+|+.++. .+++++++||+..++++... + . ...........+|++
T Consensus 141 ~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~ 220 (357)
T d1db3a_ 141 EIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNM 220 (357)
T ss_dssp SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCT
T ss_pred CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCC
Confidence 1 222345777899999999988865 48999999998877753211 0 0 011133445567888
Q ss_pred cceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEE
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~ 176 (191)
++.++++|++|+|+++..+++.+ .++.|++++ ++.+|+.|+++++.+.+|...+.
T Consensus 221 ~~~r~~~~v~D~~~a~~~~~~~~--~~~~yni~s-g~~~s~~~~~~~~~~~~g~~~~~ 275 (357)
T d1db3a_ 221 DSLRDWGHAKDYVKMQWMMLQQE--QPEDFVIAT-GVQYSVRQFVEMAAAQLGIKLRF 275 (357)
T ss_dssp TCEECCEEHHHHHHHHHHTTSSS--SCCCEEECC-CCCEEHHHHHHHHHHTTTEEEEE
T ss_pred CeeecceeechHHHHHHHHHhCC--CCCeEEECC-CCceehHHHHHHHHHHhCCcccc
Confidence 99999999999999999998875 357899996 79999999999999999976554
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=6.2e-20 Score=139.74 Aligned_cols=174 Identities=20% Similarity=0.248 Sum_probs=130.2
Q ss_pred CCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCC---cccCCC----C-
Q 038413 2 ELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSE---FGCEED----R- 58 (191)
Q Consensus 2 D~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~---~g~~~~----~- 58 (191)
|+.|.+.+..++.++|+|||+|+... +.++.+|+++|++.+ +|.+..|+ ||.... +
T Consensus 52 d~~~~~~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~k~I~~SS~~vy~~~~~~~~~e~ 130 (312)
T d2b69a1 52 ELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-ARLLLASTSEVYGDPEVHPQSED 130 (312)
T ss_dssp EEEECCTTSCCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGGBSCSSSSBCTT
T ss_pred EEEehHHHHHHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEEChheecCCCCCCCCcc
Confidence 44455666677789999999998643 346799999999999 75443443 543211 1
Q ss_pred ----CCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccc--------cCCCCCCceEEEecCCccee
Q 038413 59 ----VRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVL--------LRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 59 ----~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~ 122 (191)
..+..|.++|..+|..+|..++. .|++++++||+..+|+..... ......++.+.++++|.+.+
T Consensus 131 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r 210 (312)
T d2b69a1 131 YWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTR 210 (312)
T ss_dssp CCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEE
T ss_pred ccCCCCCCCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeE
Confidence 11124667788999999998864 599999999999998542211 00012567788899999999
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEc
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~ 179 (191)
+|+|++|+++++..+++.. .++.+++++ ++.+|..++++++++.+|.+.++...
T Consensus 211 ~~i~v~D~~~~~~~~~~~~--~~~~~n~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~ 264 (312)
T d2b69a1 211 AFQYVSDLVNGLVALMNSN--VSSPVNLGN-PEEHTILEFAQLIKNLVGSGSEIQFL 264 (312)
T ss_dssp ECEEHHHHHHHHHHHHTSS--CCSCEEESC-CCEEEHHHHHHHHHHHHTCCCCEEEE
T ss_pred ccEEHHHHHHHHHHHHhhc--cCCceEecC-CcccchhhHHHHHHHHhCCCCceEEC
Confidence 9999999999999998765 367899995 89999999999999999988776644
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.80 E-value=1.3e-18 Score=134.81 Aligned_cols=176 Identities=16% Similarity=0.179 Sum_probs=135.7
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCCC--
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEEDR-- 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~~-- 58 (191)
+|+.|.+.+.++++++|+|+|+++... ..++.+++++|++.+ ++|||. |+ |+.....
T Consensus 65 ~D~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~~~~ 143 (363)
T d2c5aa1 65 VDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLET 143 (363)
T ss_dssp CCTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSS
T ss_pred eechhHHHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhC-ccccccccccccccccccccc
Confidence 588899999999999999999986542 356799999999999 999884 33 3322111
Q ss_pred ---------CCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccCC-----------CCCCceEEE
Q 038413 59 ---------VRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLRP-----------FEPHDDVVV 114 (191)
Q Consensus 59 ---------~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~~-----------~~~~~~~~~ 114 (191)
.....|..+|..+|..+|+++++ .|++++++||+..++......... .........
T Consensus 144 ~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (363)
T d2c5aa1 144 TNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEM 223 (363)
T ss_dssp SSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEE
T ss_pred cccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccc
Confidence 11124567788999999998864 489999999998887532211100 014456778
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
+++|.+.++|+|++|+++++..+++.+ .++.+++++ ++.+|..|+++++.+.+|++.++..++
T Consensus 224 ~g~g~~~rd~i~v~D~~~~~~~~~~~~--~~~~~ni~~-~~~~s~~~l~~~i~~~~g~~~~i~~~~ 286 (363)
T d2c5aa1 224 WGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGS-DEMVSMNEMAEMVLSFEEKKLPIHHIP 286 (363)
T ss_dssp ESCSCCEECCEEHHHHHHHHHHHHHSS--CCSCEEECC-CCCEEHHHHHHHHHHTTTCCCCEEEEC
T ss_pred cCCCCeEEEEeehhHHHHHHHHHHhCC--CCCeEEEec-CCcccHHHHHHHHHHHhCCCCceEeCC
Confidence 889999999999999999999988765 467899996 899999999999999999987777654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=3.7e-19 Score=136.72 Aligned_cols=173 Identities=20% Similarity=0.227 Sum_probs=128.4
Q ss_pred CCCCCHHHHHH-hhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCC---cccCCCC---
Q 038413 1 GELDEHEKIVS-ILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSE---FGCEEDR--- 58 (191)
Q Consensus 1 gD~~d~~~l~~-a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~---~g~~~~~--- 58 (191)
||+++.+.+.+ +++++|+|||+++... +.++.+++++|.+.+ ++.++.|+ |+.....
T Consensus 52 ~Di~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~~~~~~ss~~~~~~~~~~~~~ 130 (342)
T d2blla1 52 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFD 130 (342)
T ss_dssp CCTTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBC
T ss_pred CccCChHHHHHHHHhCCCccccccccccccccccCCcccccccccccccccccccccc-ccccccccccccccccccccc
Confidence 68888766554 6789999999998753 467899999999999 87766543 3332111
Q ss_pred --------CCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccCC--------------CCCCceE
Q 038413 59 --------VRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLRP--------------FEPHDDV 112 (191)
Q Consensus 59 --------~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~~--------------~~~~~~~ 112 (191)
.....|...|..+|..+|+++.. .+++++++|++.+++......... .+.++.+
T Consensus 131 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 210 (342)
T d2blla1 131 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI 210 (342)
T ss_dssp TTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCE
T ss_pred cccccccccccCCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCc
Confidence 01112445677899999998864 489999999998887533221110 0145678
Q ss_pred EEecCCcceeeecchhhHHHHHHHHhcCc--ccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 113 VVYGNGEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 113 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
.++++|++.++++|++|+|+++..+++++ ...++.|+++++...+|+.|+++.+.+.+|+..
T Consensus 211 ~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~ 274 (342)
T d2blla1 211 KLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP 274 (342)
T ss_dssp EEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT
T ss_pred cccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCc
Confidence 88999999999999999999999999985 345789999752345899999999999998643
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=4.5e-18 Score=130.58 Aligned_cols=178 Identities=15% Similarity=0.235 Sum_probs=131.9
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCC--
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEED-- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~-- 57 (191)
||++|.+.+.++++ ++|+|||+|+... +.++.+++++|++.+ +++||. |+ |+....
T Consensus 57 ~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~~~ 135 (338)
T d1udca_ 57 GDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPKIP 135 (338)
T ss_dssp CCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSS
T ss_pred eecCCHHHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEccccccc
Confidence 69999999999997 7899999998642 467899999999999 999884 32 332211
Q ss_pred ---CCCCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEeccccccccccccc----------------C-CCCCCceE
Q 038413 58 ---RVRPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLL----------------R-PFEPHDDV 112 (191)
Q Consensus 58 ---~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~----------------~-~~~~~~~~ 112 (191)
......|..+|..+|...|+.+.+ .+++++++|++..++...+... . .......+
T Consensus 136 ~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i 215 (338)
T d1udca_ 136 YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSL 215 (338)
T ss_dssp BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCE
T ss_pred cccccccCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCE
Confidence 111234677889999999998874 4789999999988875322100 0 00134466
Q ss_pred EEecC------CcceeeecchhhHHHHHHHHhcCc--ccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 113 VVYGN------GEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 113 ~~~~~------g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
.+.|+ |.+.++|+|++|++.+...++... ...++++++++ ++.+|+.|+++.+.+.+|.++++...+
T Consensus 216 ~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~-~~~~si~e~~~~i~~~~g~~~~~~~~~ 290 (338)
T d1udca_ 216 AIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGA-GVGNSVLDVVNAFSKACGKPVNYHFAP 290 (338)
T ss_dssp EEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESC-SSCEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred EEeCCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecC-CCCCcHHHHHHHHHHHHCCCCceEECC
Confidence 77664 677899999999998877766542 33467899985 789999999999999999877766543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.77 E-value=1.1e-18 Score=135.28 Aligned_cols=169 Identities=15% Similarity=0.188 Sum_probs=128.1
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcC--------CccEEEc-CC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAG--------NIKRFLP-SE--- 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g--------~vkr~v~-s~--- 51 (191)
+|++|.+.+.++++ .+|+|||+|+... +.++.+++++|++.+ .++|||. |+
T Consensus 57 ~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~v 136 (361)
T d1kewa_ 57 ADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV 136 (361)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG
T ss_pred ccCCCHHHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEecccee
Confidence 69999999999987 4799999998643 356789999998865 0347774 32
Q ss_pred cccCCC--------------CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc------cccCCCC
Q 038413 52 FGCEED--------------RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN------VLLRPFE 107 (191)
Q Consensus 52 ~g~~~~--------------~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~------~~~~~~~ 107 (191)
||.... +.....|.+.|..+|...|.++.. .+++++++||+..+|++.. .+.....
T Consensus 137 yg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~ 216 (361)
T d1kewa_ 137 YGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNAL 216 (361)
T ss_dssp GCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHH
T ss_pred eCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHH
Confidence 543211 011124667788999999999875 5999999999988875321 1111112
Q ss_pred CCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 108 PHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 108 ~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
.++.+.++|+|++.++|+|++|+|+++..+++++. .++.+++++ ++..|..|+++.+.+.++
T Consensus 217 ~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~-~~~~~Ni~s-~~~~s~~~~~~~i~~~~~ 278 (361)
T d1kewa_ 217 EGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK-AGETYNIGG-HNEKKNLDVVFTICDLLD 278 (361)
T ss_dssp HTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TTCEEEECC-CCEEEHHHHHHHHHHHHH
T ss_pred cCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC-CCCeEEECC-CCCcchHHHHhHhhhhcc
Confidence 55678889999999999999999999999998865 377899985 799999999999988763
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.76 E-value=4.4e-18 Score=133.06 Aligned_cols=177 Identities=19% Similarity=0.204 Sum_probs=126.7
Q ss_pred CCCCCHHHHHHhhccC--cEEEEccCCCC------------------cccHHHHHHHHHHcCCccE-EEc-CC---cccC
Q 038413 1 GELDEHEKIVSILKEV--DVVISTVAYPQ------------------FLDQLKIVHAIKVAGNIKR-FLP-SE---FGCE 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~--d~V~~~~~~~~------------------~~~~~~li~aa~~~g~vkr-~v~-s~---~g~~ 55 (191)
||+.|.+.+.++++++ |+|||+|+... +.++.+++++|++.+ +++ ++. |+ |+..
T Consensus 74 ~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~~i~~ss~~~~~~~ 152 (393)
T d1i24a_ 74 GDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTP 152 (393)
T ss_dssp SCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCC
T ss_pred ccCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhc-cccceeecccccccccc
Confidence 6999999999999864 99999998532 456899999999998 665 553 32 2211
Q ss_pred CC---C--------------CCCCCCchhhHHHHHHHHHHHH----hcCCCeEEEeccccccccccccc-----------
Q 038413 56 ED---R--------------VRPLPPFEAYLEKKRIVRRAIE----AVEIPYTFVSANCYGAYFVNVLL----------- 103 (191)
Q Consensus 56 ~~---~--------------~~~~~~~~~~~~~k~~~e~~l~----~~~~~~tilrp~~~~~~~~~~~~----------- 103 (191)
.. . .....|.++|..+|..+|+++. +.+++++++||+..++.......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~ 232 (393)
T d1i24a_ 153 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDY 232 (393)
T ss_dssp SSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCC
T ss_pred ccccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccc
Confidence 10 0 0112456678899999998875 36999999999988875321100
Q ss_pred ------------CCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHh-
Q 038413 104 ------------RPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKT- 170 (191)
Q Consensus 104 ------------~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~- 170 (191)
.....++.+.++|++.+.++|+|++|+++++..+++++...++...+.++++.+|+.|+++++.+..
T Consensus 233 ~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~ 312 (393)
T d1i24a_ 233 DAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGS 312 (393)
T ss_dssp STTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHH
T ss_pred ccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHH
Confidence 0001456788899999999999999999999999998765555433321368899999999998875
Q ss_pred --CCceEEEE
Q 038413 171 --GRSFKRVH 178 (191)
Q Consensus 171 --g~~~~~~~ 178 (191)
|.+++...
T Consensus 313 ~~~~~~~~~~ 322 (393)
T d1i24a_ 313 KLGLDVKKMT 322 (393)
T ss_dssp TTTCCCCEEE
T ss_pred hhCCCcceee
Confidence 44445443
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.76 E-value=2e-17 Score=126.97 Aligned_cols=170 Identities=15% Similarity=0.101 Sum_probs=132.8
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-C---CcccCC----C
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-S---EFGCEE----D 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s---~~g~~~----~ 57 (191)
+|+.|...+.....+.+.|+|+++... +.++.+++++|++++ +++||. | .||... .
T Consensus 77 ~d~~d~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~ 155 (341)
T d1sb8a_ 77 GDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKV 155 (341)
T ss_dssp CCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBC
T ss_pred eccccccccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCCcc
Confidence 588888888888899999999987643 567899999999999 999884 3 255332 2
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccccccC----------CCCCCceEEEecCCcceee
Q 038413 58 RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLLR----------PFEPHDDVVVYGNGEAKAV 123 (191)
Q Consensus 58 ~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~~----------~~~~~~~~~~~~~g~~~~~ 123 (191)
+.....|...|..+|...|+++.. .+++++++||+.++++....... ..+.++.+.++|+|.+.++
T Consensus 156 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~ 235 (341)
T d1sb8a_ 156 EDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRD 235 (341)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEEC
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEE
Confidence 223345777888999999988764 48999999999888754221110 0124567888999999999
Q ss_pred ecchhhHHHHHHHHhcCc-ccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 124 FNYEEDIAKCTIKVINDP-RTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~-~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
|+|++|+|.++..++..+ ...++.+++++ ++.+|+.|+++++.+.+|.
T Consensus 236 ~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~-~~~~si~~i~~~i~~~~~~ 284 (341)
T d1sb8a_ 236 FCYIENTVQANLLAATAGLDARNQVYNIAV-GGRTSLNQLFFALRDGLAE 284 (341)
T ss_dssp CEEHHHHHHHHHHHHTCCGGGCSEEEEESC-SCCEEHHHHHHHHHHHHHH
T ss_pred EEEEeccchhhhhhhhccccccceeeeecc-cccchHHHHHHHHHHHhcc
Confidence 999999999999988765 35678899985 7999999999999999974
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.74 E-value=7.3e-17 Score=125.69 Aligned_cols=177 Identities=15% Similarity=0.172 Sum_probs=129.2
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcC----CcccCCC-
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPS----EFGCEED- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s----~~g~~~~- 57 (191)
||+.|.+.|.++++ ++|+|||+++... ..++.+++++|++.+ +++++.. .++....
T Consensus 76 ~Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~ 154 (383)
T d1gy8a_ 76 GDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMG 154 (383)
T ss_dssp SCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-
T ss_pred CcccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Ccccccccccccccccccc
Confidence 69999999999885 6799999998653 466899999999999 9987731 2322111
Q ss_pred ----------CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccccc--------------------
Q 038413 58 ----------RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLL-------------------- 103 (191)
Q Consensus 58 ----------~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~-------------------- 103 (191)
+.....|.++|..+|...|+++.+ .|++++++||+..+++......
T Consensus 155 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~ 234 (383)
T d1gy8a_ 155 SVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMS 234 (383)
T ss_dssp ----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHH
T ss_pred cccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHh
Confidence 111234677899999999999875 5899999999887774321100
Q ss_pred -----------CCCCCCceEEEec------CCcceeeecchhhHHHHHHHHhcCc--------ccCCceeEeecCCCccC
Q 038413 104 -----------RPFEPHDDVVVYG------NGEAKAVFNYEEDIAKCTIKVINDP--------RTCNRIVIYRPQTNIIS 158 (191)
Q Consensus 104 -----------~~~~~~~~~~~~~------~g~~~~~~i~~~Dva~~~~~~l~~~--------~~~~~~~~i~~~~~~~t 158 (191)
........+.++| +|.+.++|+|++|+|+++..+++.. ....+.|++++ ++.+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s-~~~~s 313 (383)
T d1gy8a_ 235 DIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT-SRGYS 313 (383)
T ss_dssp HHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESC-SCCEE
T ss_pred hccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCC-CCcee
Confidence 0001334556655 4677899999999999999988642 12357789985 79999
Q ss_pred HHHHHHHHHHHhCCceEEEEc
Q 038413 159 QLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 159 ~~e~~~~~~~~~g~~~~~~~~ 179 (191)
+.|+++++.+.+|.+.++...
T Consensus 314 ~~el~~~i~~~~~~~~~~~~~ 334 (383)
T d1gy8a_ 314 VREVIEVARKTTGHPIPVREC 334 (383)
T ss_dssp HHHHHHHHHHHHCCCCCEEEE
T ss_pred HHHHHHHHHHHhCCCCceEEC
Confidence 999999999999987766554
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.72 E-value=2.8e-17 Score=126.41 Aligned_cols=170 Identities=14% Similarity=0.189 Sum_probs=129.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcC---CcccCC------
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPS---EFGCEE------ 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s---~~g~~~------ 56 (191)
||+.|.+.+.+++.+++.|+|+++... +.++.|++++|++.+ .+.++.| .||...
T Consensus 59 ~Di~d~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~ 137 (346)
T d1oc2a_ 59 GDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLP 137 (346)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGST
T ss_pred ccCCCHHHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecccCcccccc
Confidence 699999999999999999999987643 467899999999999 6554432 244210
Q ss_pred ----------CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc--cc----cCCCCCCceEEEec
Q 038413 57 ----------DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN--VL----LRPFEPHDDVVVYG 116 (191)
Q Consensus 57 ----------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~--~~----~~~~~~~~~~~~~~ 116 (191)
.+.....|.+.|..+|..+|++++. .+++++++||+..+|+... .. ......+..+.+++
T Consensus 138 ~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~ 217 (346)
T d1oc2a_ 138 GHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYG 217 (346)
T ss_dssp TTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEET
T ss_pred ccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeC
Confidence 0011224566788999999988764 5899999999988874321 11 01112455678889
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
+|++.++++|++|+|+++..++.++. .+..+++++ ++..|+.++++.+.+.+|.+
T Consensus 218 ~g~~~r~~i~v~D~a~a~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 272 (346)
T d1oc2a_ 218 EGKNVRDWIHTNDHSTGVWAILTKGR-MGETYLIGA-DGEKNNKEVLELILEKMGQP 272 (346)
T ss_dssp TSCCEEECEEHHHHHHHHHHHHHHCC-TTCEEEECC-SCEEEHHHHHHHHHHHTTCC
T ss_pred CCCccccccchhhHHHHHHHHHhhcc-cCccccccc-cccccchHHHHHHHHHhCCC
Confidence 99999999999999999998888765 467778875 79999999999999999864
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=6e-16 Score=118.76 Aligned_cols=178 Identities=14% Similarity=0.166 Sum_probs=128.5
Q ss_pred CCCCCHHHHHHhhccC--cEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-C---CcccCCCCC
Q 038413 1 GELDEHEKIVSILKEV--DVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-S---EFGCEEDRV 59 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~--d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s---~~g~~~~~~ 59 (191)
+|++|.+.+.+++.+. ++++|+++... +.++.+++++|++.+ |++|+. | .++......
T Consensus 65 ~Dl~d~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~ 143 (346)
T d1ek6a_ 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLP 143 (346)
T ss_dssp CCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSS
T ss_pred eeccccccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeecccccc
Confidence 6999999999999754 57899998653 456789999999999 999874 2 244332211
Q ss_pred -----CCCCCchhhHHHHHHHHHHHHh-----cCCCeEEEeccccccccccccc------CC-----------CCCCceE
Q 038413 60 -----RPLPPFEAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLL------RP-----------FEPHDDV 112 (191)
Q Consensus 60 -----~~~~~~~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~------~~-----------~~~~~~~ 112 (191)
....+.++|..+|...|+.+.+ .+++++++|++..++...+... .. ......+
T Consensus 144 ~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 223 (346)
T d1ek6a_ 144 LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREAL 223 (346)
T ss_dssp BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCE
T ss_pred ccccccccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcE
Confidence 1123566788899999888764 4899999999887764322110 00 0134455
Q ss_pred EEec------CCcceeeecchhhHHHHHHHHhcCc--ccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcC
Q 038413 113 VVYG------NGEAKAVFNYEEDIAKCTIKVINDP--RTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHIS 180 (191)
Q Consensus 113 ~~~~------~g~~~~~~i~~~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 180 (191)
.+++ +|.+.++|+|++|+|.++..++... ...+++|++++ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus 224 ~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~-~~~~s~~dl~~~i~~~~~~~~~~~~~~ 298 (346)
T d1ek6a_ 224 NVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGT-GTGYSVLQMVQAMEKASGKKIPYKVVA 298 (346)
T ss_dssp EEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECC-SCCEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred EEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCC-CCcccHHHHHHHHHHHhCCCCCeEECC
Confidence 6654 4566789999999999988876543 23467899996 799999999999999999887765543
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.69 E-value=2.1e-16 Score=121.47 Aligned_cols=176 Identities=14% Similarity=0.182 Sum_probs=122.5
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEc-C---CcccCC---
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLP-S---EFGCEE--- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~-s---~~g~~~--- 56 (191)
+|+.|.+.+.++++ ++|+|||+|+... ..++.+++++|++.+ ++||+. | .||...
T Consensus 58 ~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~ 136 (347)
T d1z45a2 58 VDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFP 136 (347)
T ss_dssp CCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGST
T ss_pred eecCCHHHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCC
Confidence 69999999999987 7899999998753 456799999999999 999884 3 354321
Q ss_pred -----CCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccC------C-----------CCC
Q 038413 57 -----DRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLR------P-----------FEP 108 (191)
Q Consensus 57 -----~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~------~-----------~~~ 108 (191)
.+.....|..+|..+|...|+.+.+ .+++++++||+..++........ + ...
T Consensus 137 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 216 (347)
T d1z45a2 137 NMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGR 216 (347)
T ss_dssp TCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTS
T ss_pred CCCccccccCCCCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcC
Confidence 1122234677889999999988764 37889999988766532111000 0 012
Q ss_pred CceEEEecCC------cceeeecchhhHHHHHHHHhcC------cccCCceeEeecCCCccCHHHHHHHHHHHhCCceEE
Q 038413 109 HDDVVVYGNG------EAKAVFNYEEDIAKCTIKVIND------PRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKR 176 (191)
Q Consensus 109 ~~~~~~~~~g------~~~~~~i~~~Dva~~~~~~l~~------~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~ 176 (191)
...+.++|++ ...++++++.|.+.+...+++. +...++.+++++ ++.+|+.|+++++.+.+|.+.++
T Consensus 217 ~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~-~~~~s~~e~~~~i~~~~~~~~~~ 295 (347)
T d1z45a2 217 REKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGS-GKGSTVFEVYHAFCKASGIDLPY 295 (347)
T ss_dssp SSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESC-SCCEEHHHHHHHHHHHHTCCCCC
T ss_pred CCCeEEeCCCccccCCceeeeeeeeecccccccccccccccccccccccccceecC-CCcccHHHHHHHHHHHHCCCCce
Confidence 3445555544 3445677777788887777653 223468899985 79999999999999999988766
Q ss_pred EE
Q 038413 177 VH 178 (191)
Q Consensus 177 ~~ 178 (191)
..
T Consensus 296 ~~ 297 (347)
T d1z45a2 296 KV 297 (347)
T ss_dssp --
T ss_pred Ee
Confidence 53
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.69 E-value=3.9e-16 Score=118.52 Aligned_cols=171 Identities=12% Similarity=0.093 Sum_probs=126.4
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcC-C---cccCCC--
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPS-E---FGCEED-- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s-~---~g~~~~-- 57 (191)
+|+.|.+.+.+.+.. .++++|+++... ..++.+++++|++.+..++|+.+ + ||....
T Consensus 56 ~Dl~d~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~ 135 (321)
T d1rpna_ 56 GDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAER 135 (321)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSS
T ss_pred ccccChHHhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCC
Confidence 689999999998864 567788776542 46689999999999933466643 2 332211
Q ss_pred --CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEecccccccccc-cc---------cCCCCCCceEEEecCCcce
Q 038413 58 --RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVN-VL---------LRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 58 --~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~-~~---------~~~~~~~~~~~~~~~g~~~ 121 (191)
+.....|..+|..+|...|+.+.+ .+++++++||+..+++... .+ ............+|+|++.
T Consensus 136 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~ 215 (321)
T d1rpna_ 136 QDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAK 215 (321)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCE
T ss_pred CCCCCCccccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeE
Confidence 122234677888999999998864 5899999999877765321 11 0111234455678889999
Q ss_pred eeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCce
Q 038413 122 AVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSF 174 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~ 174 (191)
++|+|++|+|+++..++.++. ++.+++++ ++..|..++++.+.+..|.+.
T Consensus 216 r~~i~v~D~~~~~~~~~~~~~--~~~~ni~~-~~~~s~~~~~~~~~~~~~~~~ 265 (321)
T d1rpna_ 216 RDWGFAGDYVEAMWLMLQQDK--ADDYVVAT-GVTTTVRDMCQIAFEHVGLDY 265 (321)
T ss_dssp EECEEHHHHHHHHHHHHHSSS--CCCEEECC-SCEEEHHHHHHHHHHTTTCCG
T ss_pred EccEEeHHHHHHHHHHHhcCC--cCCceecc-cccceehhhhHHHHHHhCCCc
Confidence 999999999999999999874 46788885 799999999999999998753
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.67 E-value=2.8e-16 Score=117.00 Aligned_cols=177 Identities=18% Similarity=0.140 Sum_probs=129.5
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCC---cccCC----
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSE---FGCEE---- 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~---~g~~~---- 56 (191)
+|+.|.+++.++++ +.|+|||+++... .....++.++++..+ ...+..|+ ++...
T Consensus 36 ~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~ 114 (281)
T d1vl0a_ 36 LDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPI 114 (281)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCB
T ss_pred ccCCCHHHHHHHHHHcCCCEEEeeccccccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccc
Confidence 48899999999997 5699999988764 233466777777776 55554443 22211
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEeccccccccccccc---CCCCCCceEEEecCCcceeeecchhhHHHH
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLL---RPFEPHDDVVVYGNGEAKAVFNYEEDIAKC 133 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~ 133 (191)
.+.....|...+...|...|+++++.+.+++++||+.++++...... .....++...+.+ +..+++++++|++++
T Consensus 115 ~e~~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~ 192 (281)
T d1vl0a_ 115 TEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARV 192 (281)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHH
T ss_pred cccccccchhhhhhhhhHHHHHHHHhCCCccccceeEEeCCCcccccchhhhhccCCceeecC--Cceeccchhhhhhhh
Confidence 11222345566778999999999999999999999999986432211 1111344555554 567899999999999
Q ss_pred HHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEcCHHH
Q 038413 134 TIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHISEEE 183 (191)
Q Consensus 134 ~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~ 183 (191)
+..+++++. .+.+++++ ++.+|+.|+++.+++.+|++.++..++.++
T Consensus 193 ~~~~~~~~~--~g~~~~~~-~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~ 239 (281)
T d1vl0a_ 193 VLKVIDEKN--YGTFHCTC-KGICSWYDFAVEIFRLTGIDVKVTPCTTEE 239 (281)
T ss_dssp HHHHHHHTC--CEEEECCC-BSCEEHHHHHHHHHHHHCCCCEEEEECSTT
T ss_pred hhhhhhhcc--cCceeEeC-CCccchHHHHHHHHHHhCCCceEEeccHHH
Confidence 999998864 36888885 799999999999999999999888776544
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=5.1e-15 Score=112.01 Aligned_cols=176 Identities=18% Similarity=0.127 Sum_probs=130.8
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC----------------cccHHHHHHHHHHcCCccEEEc-CC---cccCCCC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ----------------FLDQLKIVHAIKVAGNIKRFLP-SE---FGCEEDR 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~----------------~~~~~~li~aa~~~g~vkr~v~-s~---~g~~~~~ 58 (191)
.|+.|.+.+.+.++ ..|.|+|+++... +.++.+++++|++.+ ++|||. |+ ||.....
T Consensus 38 ~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~ 116 (315)
T d1e6ua_ 38 LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQ 116 (315)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCS
T ss_pred ccccCHHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCC
Confidence 37888999998886 4799999986542 467899999999999 999884 43 5432111
Q ss_pred ----C----CCCC-CchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccccc---------------CCCCCCc
Q 038413 59 ----V----RPLP-PFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNVLL---------------RPFEPHD 110 (191)
Q Consensus 59 ----~----~~~~-~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~---------------~~~~~~~ 110 (191)
. .... |.++|..+|..+|+.+.+ .|++++++||+..+|+...... .......
T Consensus 117 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (315)
T d1e6ua_ 117 PMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAP 196 (315)
T ss_dssp SBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCS
T ss_pred CccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCC
Confidence 1 0111 234688899999998864 5999999999998875321110 0011567
Q ss_pred eEEEecCCcceeeecchhhHHHHHHHHhcCcc--------cCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 111 DVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR--------TCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 111 ~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--------~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
.+.++++|...+++++++|+++++..++.++. .....++++. +...+..++++.+.+.+|.+..+..
T Consensus 197 ~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~i~~~~~~~~~i~~ 271 (315)
T d1e6ua_ 197 DVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGT-GVDCTIRELAQTIAKVVGYKGRVVF 271 (315)
T ss_dssp EEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESC-SCCEEHHHHHHHHHHHHTCCSEEEE
T ss_pred ceEEcCCCceEEEEEEeehhHHHHHHhhhhccccccccccccccccccCC-CcchHHHHHHHHHHHHhCCCcceEE
Confidence 78889999889999999999999999987642 2345677774 7889999999999999998877654
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.66 E-value=2.4e-16 Score=114.53 Aligned_cols=164 Identities=17% Similarity=0.160 Sum_probs=115.1
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC----------------------------cccHHHHHHHHHHcCCccEEEc-CC
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ----------------------------FLDQLKIVHAIKVAGNIKRFLP-SE 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~----------------------------~~~~~~li~aa~~~g~vkr~v~-s~ 51 (191)
+|+.|.+.+.++++++|+|||+++... ..++.+++..++..+ ++++.. |+
T Consensus 54 ~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~ 132 (252)
T d2q46a1 54 GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGS 132 (252)
T ss_dssp CCTTSHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEE
T ss_pred eeeccccccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccc
Confidence 689999999999999999999987531 245788999999888 777664 33
Q ss_pred cccCCCCCC-CCCCchhhHHHHHHHHHHHHhcCCCeEEEecccccccccccccCCCCCCceEEEec--CCcceeeecchh
Q 038413 52 FGCEEDRVR-PLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG--NGEAKAVFNYEE 128 (191)
Q Consensus 52 ~g~~~~~~~-~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~i~~~ 128 (191)
.+....... ...+...+...+...+.+..+++++||++||+.++++...... .+.-.. ......++|+++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~i~~~ 205 (252)
T d2q46a1 133 MGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE-------LLVGKDDELLQTDTKTVPRA 205 (252)
T ss_dssp TTTTCTTCGGGGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSC-------EEEESTTGGGGSSCCEEEHH
T ss_pred cccCCCCcccccccccchhhhhhhhhhhhhcccccceeecceEEECCCcchhh-------hhhccCcccccCCCCeEEHH
Confidence 332211110 0011233456677777888889999999999999886422110 011100 123346799999
Q ss_pred hHHHHHHHHhcCcccCCceeEeecCC--CccCHHHHHHHHHHHhCC
Q 038413 129 DIAKCTIKVINDPRTCNRIVIYRPQT--NIISQLELISLWEQKTGR 172 (191)
Q Consensus 129 Dva~~~~~~l~~~~~~~~~~~i~~~~--~~~t~~e~~~~~~~~~g~ 172 (191)
|+|++++.++++|+..|++|++++++ ...+..|+.++++++++|
T Consensus 206 Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~r 251 (252)
T d2q46a1 206 DVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 251 (252)
T ss_dssp HHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHhc
Confidence 99999999999998889999998522 246688888888887764
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.66 E-value=2.1e-15 Score=114.76 Aligned_cols=179 Identities=12% Similarity=0.097 Sum_probs=125.8
Q ss_pred CCCCCHHHHHHhhccC--cEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEE-cCCc----ccCCC-
Q 038413 1 GELDEHEKIVSILKEV--DVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFL-PSEF----GCEED- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~--d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v-~s~~----g~~~~- 57 (191)
||+.|.+.+.++++++ |+|||+++... +.++.||+++|++.+ +++++ .||. +....
T Consensus 56 ~Di~~~~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~ 134 (338)
T d1orra_ 56 GDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQY 134 (338)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTS
T ss_pred cccCCHHHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccc-cccccccccccccccccccc
Confidence 6999999999999875 99999998753 467899999999999 76644 3321 11100
Q ss_pred -------------------CCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccc-cc--------ccC-
Q 038413 58 -------------------RVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFV-NV--------LLR- 104 (191)
Q Consensus 58 -------------------~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~-~~--------~~~- 104 (191)
......|...|...|...|.++.. .+...+.+++...+.... .. +..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (338)
T d1orra_ 135 KYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQK 214 (338)
T ss_dssp CEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHH
T ss_pred ccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHH
Confidence 001123455667778877777543 578888877654442111 11 100
Q ss_pred ----CCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcc-cCCceeEeec-CCCccCHHHHHHHHHHHhCCceEEEE
Q 038413 105 ----PFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR-TCNRIVIYRP-QTNIISQLELISLWEQKTGRSFKRVH 178 (191)
Q Consensus 105 ----~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i~~-~~~~~t~~e~~~~~~~~~g~~~~~~~ 178 (191)
.....+.+.++|+|.+.++|+|++|++++++.+++++. ..++.+++.+ .+..+|..|+++.+.+.+|.+.++..
T Consensus 215 ~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~ 294 (338)
T d1orra_ 215 AVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTN 294 (338)
T ss_dssp HHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEE
T ss_pred HHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEe
Confidence 01145678899999999999999999999999998854 4567788743 24679999999999999998776665
Q ss_pred cC
Q 038413 179 IS 180 (191)
Q Consensus 179 ~~ 180 (191)
.+
T Consensus 295 ~~ 296 (338)
T d1orra_ 295 LP 296 (338)
T ss_dssp EC
T ss_pred CC
Confidence 43
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=1.3e-16 Score=116.38 Aligned_cols=143 Identities=14% Similarity=0.108 Sum_probs=101.0
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchh
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEA 67 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~ 67 (191)
+|+.+.+++.++++|+|+|||+++... ...+.+++++|++.| +++|+. |+.+... .+..+
T Consensus 66 ~D~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~------~~~~~ 138 (232)
T d2bkaa1 66 VDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADK------SSNFL 138 (232)
T ss_dssp CCGGGGGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT------TCSSH
T ss_pred ecccccccccccccccccccccccccccccchhhhhhhcccccceeeecccccC-ccccccCCcccccc------Cccch
Confidence 578889999999999999999998642 456789999999999 999985 5544322 23456
Q ss_pred hHHHHHHHHHHHHhcCCC-eEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCc
Q 038413 68 YLEKKRIVRRAIEAVEIP-YTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNR 146 (191)
Q Consensus 68 ~~~~k~~~e~~l~~~~~~-~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~ 146 (191)
|..+|.++|+++.+.+++ |+|+||+.++++.........+....+...+.+......|+++|+|++++.++.++.. ++
T Consensus 139 Y~~~K~~~E~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~ 217 (232)
T d2bkaa1 139 YLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQ 217 (232)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SS
T ss_pred hHHHHHHhhhccccccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc-CC
Confidence 889999999999999986 9999999999864221100000000111122233334579999999999999888753 44
Q ss_pred eeEee
Q 038413 147 IVIYR 151 (191)
Q Consensus 147 ~~~i~ 151 (191)
...+.
T Consensus 218 ~~i~~ 222 (232)
T d2bkaa1 218 MELLE 222 (232)
T ss_dssp EEEEE
T ss_pred eEEEc
Confidence 44454
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.64 E-value=4.6e-16 Score=119.44 Aligned_cols=168 Identities=12% Similarity=0.048 Sum_probs=114.4
Q ss_pred CCCCCHHHHHHhhccCcEEEEccCCCC------------cccHHHHHHHHHHcCCccEEEc-CCccc---CCCC------
Q 038413 1 GELDEHEKIVSILKEVDVVISTVAYPQ------------FLDQLKIVHAIKVAGNIKRFLP-SEFGC---EEDR------ 58 (191)
Q Consensus 1 gD~~d~~~l~~a~~g~d~V~~~~~~~~------------~~~~~~li~aa~~~g~vkr~v~-s~~g~---~~~~------ 58 (191)
+|+.|.+++.+++.++|+|+|+++... +.++.+++++|++.+.+++|+. |+.+. ....
T Consensus 69 ~Dl~~~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~ 148 (342)
T d1y1pa1 69 EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYL 148 (342)
T ss_dssp SCTTSTTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred ccccchhhhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccc
Confidence 689999999999999999999998753 4568999999998733999885 43211 0000
Q ss_pred ------------------CCCCCCchhhHHHHHHHHHHHH----hc--CCCeEEEecccccccccccccCC---------
Q 038413 59 ------------------VRPLPPFEAYLEKKRIVRRAIE----AV--EIPYTFVSANCYGAYFVNVLLRP--------- 105 (191)
Q Consensus 59 ------------------~~~~~~~~~~~~~k~~~e~~l~----~~--~~~~tilrp~~~~~~~~~~~~~~--------- 105 (191)
.....|..+|..+|..+|.++. +. ++++++++|+..+++........
T Consensus 149 ~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~ 228 (342)
T d1y1pa1 149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMS 228 (342)
T ss_dssp CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHH
T ss_pred cccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHH
Confidence 0011234567789988887543 33 46678888887766432111000
Q ss_pred CCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 106 FEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
...++.... ..+...++|+|++|+|++++.+++++...++.+ +++ ++.+|+.|+++++.+..+
T Consensus 229 l~~g~~~~~-~~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~-~~~-~~~~t~~eia~~i~k~~p 291 (342)
T d1y1pa1 229 LFNGEVSPA-LALMPPQYYVSAVDIGLLHLGCLVLPQIERRRV-YGT-AGTFDWNTVLATFRKLYP 291 (342)
T ss_dssp HHTTCCCHH-HHTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEE-EEC-CEEECHHHHHHHHHHHCT
T ss_pred HHcCCcCcc-cCCccceeeeeHHHHHHHHHHhhcCccccceEE-EEc-CCceEHHHHHHHHHHHcC
Confidence 012222222 234456899999999999999999987655554 554 789999999999999973
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=7.8e-15 Score=112.33 Aligned_cols=175 Identities=14% Similarity=0.150 Sum_probs=130.7
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcCCc---cEEEc-C---CcccCC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNI---KRFLP-S---EFGCEE 56 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~v---kr~v~-s---~~g~~~ 56 (191)
||++|.+.+.+++. +.++|+|+++... +.++.+++++|++++ + ++||. | .||...
T Consensus 63 ~Dl~d~~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~~~~i~~SS~~vyg~~~ 141 (347)
T d1t2aa_ 63 GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQ 141 (347)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCS
T ss_pred eecCCchhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcC-CCCCcEEEEecchheecCCC
Confidence 68999999999996 5678998887543 456799999999987 5 36774 3 366422
Q ss_pred ----CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc-cc---------CCCCCCceEEEecCC
Q 038413 57 ----DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV-LL---------RPFEPHDDVVVYGNG 118 (191)
Q Consensus 57 ----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~-~~---------~~~~~~~~~~~~~~g 118 (191)
.+.....|.++|..+|.++|+++.+ .+++++++||+..+++.... .. ...........+|++
T Consensus 142 ~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g 221 (347)
T d1t2aa_ 142 EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNL 221 (347)
T ss_dssp SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCT
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCC
Confidence 2223345777899999999998864 58999999998887753211 00 011145567888899
Q ss_pred cceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCceEEEEc
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRSFKRVHI 179 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~~~~~~~ 179 (191)
++.++++|++|+++++..++.+... +.++++. ....+..+....+...+|+.+.....
T Consensus 222 ~~~r~~i~v~D~~~a~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (347)
T d1t2aa_ 222 DAKRDWGHAKDYVEAMWLMLQNDEP--EDFVIAT-GEVHSVREFVEKSFLHIGKTIVWEGK 279 (347)
T ss_dssp TCEECCEEHHHHHHHHHHHHHSSSC--CCEEECC-SCCEEHHHHHHHHHHHTTCCEEEESC
T ss_pred cceeeeeEecHHHHHHHHHhhcCCC--ccceecc-ccccccchhhhhhhhhhcceeeeccc
Confidence 9999999999999999999988642 4566664 78999999999999999997665443
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.60 E-value=8e-15 Score=111.88 Aligned_cols=170 Identities=11% Similarity=0.099 Sum_probs=120.7
Q ss_pred CCCCCHHHHHHhhc--cCcEEEEccCCCC---------------cccHHHHHHHHHHcC----CccEEEc-CC---cccC
Q 038413 1 GELDEHEKIVSILK--EVDVVISTVAYPQ---------------FLDQLKIVHAIKVAG----NIKRFLP-SE---FGCE 55 (191)
Q Consensus 1 gD~~d~~~l~~a~~--g~d~V~~~~~~~~---------------~~~~~~li~aa~~~g----~vkr~v~-s~---~g~~ 55 (191)
+|+.+.+.+.++++ ++|+|||+|+... ..++.++++++++.+ ...+++. |+ ++..
T Consensus 63 ~Di~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~ 142 (339)
T d1n7ha_ 63 ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST 142 (339)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS
T ss_pred ccccCHHHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC
Confidence 58899999999986 5799999998753 345788888887653 0234543 22 2221
Q ss_pred C---CCCCCCCCchhhHHHHHHHHHHHHh----cCCCeEEEeccccccccccc-cc---------CCCCCCceEEEecCC
Q 038413 56 E---DRVRPLPPFEAYLEKKRIVRRAIEA----VEIPYTFVSANCYGAYFVNV-LL---------RPFEPHDDVVVYGNG 118 (191)
Q Consensus 56 ~---~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~tilrp~~~~~~~~~~-~~---------~~~~~~~~~~~~~~g 118 (191)
. .+.....|...|..+|...|+++.. .+++++++||+..+|+.... +. ..........+.|++
T Consensus 143 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~ 222 (339)
T d1n7ha_ 143 PPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNL 222 (339)
T ss_dssp CSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCT
T ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCC
Confidence 1 1222235677888999999988754 69999999998888754221 10 001133445567888
Q ss_pred cceeeecchhhHHHHHHHHhcCcccCCceeEeecCCCccCHHHHHHHHHHHhCCc
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQLELISLWEQKTGRS 173 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~~ 173 (191)
.+.++++|++|+|+++..++.++.. ..+++.. +...|..++++.+.+.+|.+
T Consensus 223 ~~~rd~~~v~D~a~~~~~~~~~~~~--~~~~~~~-~~~~s~~~~~~~~~~~~~~~ 274 (339)
T d1n7ha_ 223 QASRDWGFAGDYVEAMWLMLQQEKP--DDYVVAT-EEGHTVEEFLDVSFGYLGLN 274 (339)
T ss_dssp TCEEECEEHHHHHHHHHHHHTSSSC--CEEEECC-SCEEEHHHHHHHHHHHTTCC
T ss_pred CccccceeeehHHHHHHHHHhcCCC--Ccccccc-ccccccchhhhhhhhhhhcc
Confidence 9999999999999999999998753 3344443 68899999999999999975
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.49 E-value=1.1e-13 Score=98.92 Aligned_cols=130 Identities=13% Similarity=0.089 Sum_probs=88.4
Q ss_pred CCCHHHHHHhh-ccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEc-CCcccCCCCCCCCCCchh
Q 038413 3 LDEHEKIVSIL-KEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLP-SEFGCEEDRVRPLPPFEA 67 (191)
Q Consensus 3 ~~d~~~l~~a~-~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~-s~~g~~~~~~~~~~~~~~ 67 (191)
..|..++.+.+ .++|+||++++... ...+.+++++|++.+ +++|+. |+.+... .+...
T Consensus 49 ~~d~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~------~~~~~ 121 (212)
T d2a35a1 49 VGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADA------KSSIF 121 (212)
T ss_dssp BSCHHHHGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT------TCSSH
T ss_pred ccchhhhhhccccchheeeeeeeeeccccccccccccchhhhhhhccccccccc-cccccccccccccc------ccccc
Confidence 34444444444 46899999987642 456789999999999 999885 6555432 23456
Q ss_pred hHHHHHHHHHHHHhcCCC-eEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcc
Q 038413 68 YLEKKRIVRRAIEAVEIP-YTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 68 ~~~~k~~~e~~l~~~~~~-~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
|..+|..+|+++++.+++ |||+||+.++++................+. ..++++|+++|+|++++.++.++.
T Consensus 122 y~~~K~~~E~~l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~DvA~ai~~~~~~~~ 194 (212)
T d2a35a1 122 YNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARIL---PGKYHGIEACDLARALWRLALEEG 194 (212)
T ss_dssp HHHHHHHHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC-------CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred hhHHHHHHhhhccccccccceeeCCcceeCCcccccHHHHHHHHHhhcc---CCCCcEEEHHHHHHHHHHHHcCCC
Confidence 788999999999988885 999999999886432211100111111111 123567999999999999998864
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.37 E-value=8.3e-13 Score=98.38 Aligned_cols=167 Identities=14% Similarity=0.108 Sum_probs=114.7
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCC---cccCCC---
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSE---FGCEED--- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~---~g~~~~--- 57 (191)
+|++|.+.+.+++++ .|+|||+|+... ...+.+++++|++.+ ++.+..|+ |+....
T Consensus 38 ~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~ 116 (298)
T d1n2sa_ 38 GDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPW 116 (298)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCB
T ss_pred CcCCCHHHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCCC
Confidence 689999999999975 599999998643 355789999999998 77666543 222111
Q ss_pred -CCCCCCCchhhHHHHHHHHHHHHhcCCCeEEEeccccc-ccccccc---cCCCCCCceEEEecCCcceeeecchhhHHH
Q 038413 58 -RVRPLPPFEAYLEKKRIVRRAIEAVEIPYTFVSANCYG-AYFVNVL---LRPFEPHDDVVVYGNGEAKAVFNYEEDIAK 132 (191)
Q Consensus 58 -~~~~~~~~~~~~~~k~~~e~~l~~~~~~~tilrp~~~~-~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 132 (191)
+.....|...|...|..+|+++......+.++|++.++ +++.... .........+... +....+++++.|+++
T Consensus 117 ~E~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~ 194 (298)
T d1n2sa_ 117 QETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLAD 194 (298)
T ss_dssp CTTSCCCCSSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHH
T ss_pred ccccccCCCchHhhhhhhhhhhHHhhhcccccccccceeeccCCccchhhhhhhcccceeecc--cceeecccccchHHH
Confidence 12223466788899999999998877777777665544 3221111 1111123344444 345678999999999
Q ss_pred HHHHHhcC---cccCCceeEeecCCCccCHHHHHHHHHHHhC
Q 038413 133 CTIKVIND---PRTCNRIVIYRPQTNIISQLELISLWEQKTG 171 (191)
Q Consensus 133 ~~~~~l~~---~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g 171 (191)
++..++.. .....+.+++++ ++.++..|+++++.+..+
T Consensus 195 ~~~~~i~~~~~~~~~~~~~n~~~-~~~~~~~~~~~~i~~~~~ 235 (298)
T d1n2sa_ 195 CTAHAIRVALNKPEVAGLYHLVA-GGTTTWHDYAALVFDEAR 235 (298)
T ss_dssp HHHHHHHHHHHCGGGCEEEECCC-BSCEEHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhccccccccccccC-CCceecHHHHHHHHhhhh
Confidence 98887752 234578899985 789999999999877663
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.30 E-value=5e-12 Score=94.35 Aligned_cols=156 Identities=11% Similarity=0.028 Sum_probs=100.0
Q ss_pred hccCcEEEEccCCCC-------------cccHHHHHHHHHHcCCccEEEcCC---cccCCCC----CCCCCCchhhHHHH
Q 038413 13 LKEVDVVISTVAYPQ-------------FLDQLKIVHAIKVAGNIKRFLPSE---FGCEEDR----VRPLPPFEAYLEKK 72 (191)
Q Consensus 13 ~~g~d~V~~~~~~~~-------------~~~~~~li~aa~~~g~vkr~v~s~---~g~~~~~----~~~~~~~~~~~~~k 72 (191)
+..+++|+|+++... ..++.+++++++..+ ++.++.|+ ++..... .....|...|..+|
T Consensus 66 ~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K 144 (307)
T d1eq2a_ 66 FGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSK 144 (307)
T ss_dssp CSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-CCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHH
T ss_pred ccchhhhhhhccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence 357899999987542 356788999999999 98877543 1111111 11124566788899
Q ss_pred HHHHHHHHh----cCCCeEEEeccccccccccccc--C-------CC-CCCc-eEEEecCCcceeeecchhhHHHHHHHH
Q 038413 73 RIVRRAIEA----VEIPYTFVSANCYGAYFVNVLL--R-------PF-EPHD-DVVVYGNGEAKAVFNYEEDIAKCTIKV 137 (191)
Q Consensus 73 ~~~e~~l~~----~~~~~tilrp~~~~~~~~~~~~--~-------~~-~~~~-~~~~~~~g~~~~~~i~~~Dva~~~~~~ 137 (191)
...|.+++. .+++++++||...+++...... . .. ..++ .....|++...++++|++|+++++..+
T Consensus 145 ~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~ 224 (307)
T d1eq2a_ 145 FLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWF 224 (307)
T ss_dssp HHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHH
T ss_pred chhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHH
Confidence 999988874 5899999999988875322110 0 00 1222 333456777889999999999999999
Q ss_pred hcCcccCCceeEeecCCCccCHHHHHHHHHHHhCC
Q 038413 138 INDPRTCNRIVIYRPQTNIISQLELISLWEQKTGR 172 (191)
Q Consensus 138 l~~~~~~~~~~~i~~~~~~~t~~e~~~~~~~~~g~ 172 (191)
+.++. +..+++++ ++..|+.|+++++.+..++
T Consensus 225 ~~~~~--~~~~~~~~-~~~~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 225 LENGV--SGIFNLGT-GRAESFQAVADATLAYHKK 256 (307)
T ss_dssp HHHCC--CEEEEESC-SCCBCHHHHHHHC------
T ss_pred hhhcc--cccccccc-ccchhHHHHHHHHHHhcCC
Confidence 98753 57889985 7999999999999887763
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.26 E-value=2e-11 Score=93.22 Aligned_cols=176 Identities=11% Similarity=0.089 Sum_probs=117.4
Q ss_pred CCCCCHHHHHHhhcc--CcEEEEccCCCC---------------cccHHHHHHHHHHcCCccEEEcCC---cccCCC---
Q 038413 1 GELDEHEKIVSILKE--VDVVISTVAYPQ---------------FLDQLKIVHAIKVAGNIKRFLPSE---FGCEED--- 57 (191)
Q Consensus 1 gD~~d~~~l~~a~~g--~d~V~~~~~~~~---------------~~~~~~li~aa~~~g~vkr~v~s~---~g~~~~--- 57 (191)
||++|++.+.+++++ .|+|+|+++... +.++.+++++|++.+..++++.++ ++....
T Consensus 63 ~Dl~d~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 142 (356)
T d1rkxa_ 63 GDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIW 142 (356)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSS
T ss_pred eeccChHhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccccccc
Confidence 699999999999874 599999998653 456899999999987345555322 111111
Q ss_pred ---CCCCCCCchhhHHHHHHHHHHHHh-------------cCCCeEEEeccccccccc---ccccC---CCCCCceEEEe
Q 038413 58 ---RVRPLPPFEAYLEKKRIVRRAIEA-------------VEIPYTFVSANCYGAYFV---NVLLR---PFEPHDDVVVY 115 (191)
Q Consensus 58 ---~~~~~~~~~~~~~~k~~~e~~l~~-------------~~~~~tilrp~~~~~~~~---~~~~~---~~~~~~~~~~~ 115 (191)
......|..+|...|...|..+.. .++.++++||+..+++.- ..+.. .....+...++
T Consensus 143 ~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~ 222 (356)
T d1rkxa_ 143 GYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII 222 (356)
T ss_dssp CBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEEC
T ss_pred ccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEE
Confidence 111223555677777777755542 468899999988776431 11100 01133445567
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCccc----CCceeE--eecCCCccCHHHHHHHHHHHhCCceEEE
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPRT----CNRIVI--YRPQTNIISQLELISLWEQKTGRSFKRV 177 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~--i~~~~~~~t~~e~~~~~~~~~g~~~~~~ 177 (191)
+.+.+.++++|++|++.++..++..+.. .+.... ... .+.++..++++.+.+..|.+.++.
T Consensus 223 ~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~ 289 (356)
T d1rkxa_ 223 RNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPND-ADATPVKNIVEQMVKYWGEGASWQ 289 (356)
T ss_dssp SCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCG-GGCEEHHHHHHHHHHHHCTTCCEE
T ss_pred eeccccccccccccccchhhhhhhhhccccccccccccccccc-ccccccchhhhhhHHHhCCCccEE
Confidence 7888889999999999999988876432 122222 222 467999999999999999776554
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.82 E-value=0.00027 Score=50.44 Aligned_cols=142 Identities=11% Similarity=0.047 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|++++.++++ +.|+++++++... + ...+.++..+++.+ --++| .
T Consensus 59 ~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~i 137 (247)
T d2ew8a1 59 CDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINL 137 (247)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred eeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCcccc
Confidence 58999998887653 5899999998643 1 12355566666665 34555 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|| .+... . .....|..+|..+..+.+. .|+....+.||++........... ...........+
T Consensus 138 sS~~~~~~-~----~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~----~~~~~~~~~~~~ 208 (247)
T d2ew8a1 138 TSTTYWLK-I----EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS----AMFDVLPNMLQA 208 (247)
T ss_dssp CCGGGGSC-C----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CTTSS
T ss_pred ccchhccc-C----cccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc----hhHHHHHHHhcc
Confidence 33 33211 1 1234577889888766542 578889999998765432221110 000000011111
Q ss_pred e-eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 A-VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~-~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
. -+...+|||++++.++.+.. . -|+.+.+.|
T Consensus 209 l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDG 242 (247)
T d2ew8a1 209 IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDG 242 (247)
T ss_dssp SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence 1 24568999999998887543 2 378888874
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.80 E-value=0.00054 Score=48.79 Aligned_cols=136 Identities=10% Similarity=0.063 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|++++.++++ +.|+++++++... +.+ .+.++..+++.+ --++| .
T Consensus 59 ~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i 137 (244)
T d1nffa_ 59 LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINI 137 (244)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred eecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEec
Confidence 58999988877653 5899999998643 112 344555566655 34555 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+.. .. .....|..+|..++.+.+. .|+....+.||++........... .. . .+ .
T Consensus 138 sS~~~~~-~~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-~~--~--~p-----l 202 (244)
T d1nffa_ 138 SSIEGLA-GT----VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-IF--Q--TA-----L 202 (244)
T ss_dssp CCGGGTS-CC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-CS--C--CS-----S
T ss_pred ccccccc-cc----ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-HH--h--cc-----c
Confidence 43 3321 11 1234577889888876553 588899999998776543322110 00 0 00 0
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|||++++.++.+.. . -++.+.+.|
T Consensus 203 ~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDG 235 (244)
T d1nffa_ 203 GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDG 235 (244)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cCCCCHHHHHHHHHHHhChhhCCCcCCEEEECC
Confidence 125678999999998887543 2 378888875
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.77 E-value=9.8e-05 Score=52.93 Aligned_cols=151 Identities=13% Similarity=0.089 Sum_probs=85.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|+++|+++... +.+ .+.++..+++.+ --++|.
T Consensus 55 ~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~i 133 (248)
T d2d1ya1 55 VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNV 133 (248)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEE
T ss_pred EeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-ccccccc
Confidence 58899888776653 5899999998642 122 344555555555 345553
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCC-CceEEEecCCcc
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEP-HDDVVVYGNGEA 120 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~ 120 (191)
++ .+.. .. .....|..+|..++.+.+ ..|+....+.||++.............. ...........-
T Consensus 134 sS~~~~~-~~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p 208 (248)
T d2d1ya1 134 ASVQGLF-AE----QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA 208 (248)
T ss_dssp CCGGGTS-BC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTST
T ss_pred ccccccc-cc----cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCC
Confidence 33 2221 11 124467788988876654 2588899999998876433222110000 000000101110
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccC
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
..-+...+|||+++..++.+.. . -|+.+.+.| +-..|
T Consensus 209 l~R~~~pedia~~v~fL~S~~s~~itG~~i~vDG-G~tas 247 (248)
T d2d1ya1 209 LRRLGKPEEVAEAVLFLASEKASFITGAILPVDG-GMTAS 247 (248)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGB
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCc-Ccccc
Confidence 1125678999999998887543 2 378888875 54433
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=97.76 E-value=0.00033 Score=50.38 Aligned_cols=146 Identities=12% Similarity=0.182 Sum_probs=81.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|.+++.++++ +.|+++++++... + ...+.++..+++.+ --++| .
T Consensus 62 ~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~i 140 (260)
T d1x1ta1 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINI 140 (260)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeec
Confidence 58999988887763 5899999998642 1 12355666666665 44655 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCce------E-EE
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDD------V-VV 114 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~------~-~~ 114 (191)
|| .+... . .....|..+|..++.+.+. .|+....+.||++.............+... . ..
T Consensus 141 sS~~~~~~-~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (260)
T d1x1ta1 141 ASAHGLVA-S----ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAAREL 215 (260)
T ss_dssp CCGGGTSC-C----TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------C
T ss_pred ccccceec-c----CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHH
Confidence 33 33221 1 1234577889888876553 578888899998765443322110000000 0 00
Q ss_pred ecCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 115 YGNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 115 ~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.....-..-+...+|||++++.++.+.. . -|+.+.+.|
T Consensus 216 ~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDG 255 (260)
T d1x1ta1 216 LSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG 255 (260)
T ss_dssp HHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECc
Confidence 0000000125678999999998887543 2 277888874
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=97.72 E-value=0.0004 Score=49.35 Aligned_cols=122 Identities=12% Similarity=0.133 Sum_probs=76.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|.+++.++++ +.|+++++++... +...+.++..+++.+ --++| .
T Consensus 64 ~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~i 142 (240)
T d2bd0a1 64 ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFI 142 (240)
T ss_dssp CCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEE
Confidence 58999988877653 5899999998642 122455666776655 34554 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+.. .. .....|..+|..++.+.+. .|+....+.||++...+..... ...+
T Consensus 143 sS~~~~~-~~----~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~--------------~~~~ 203 (240)
T d2bd0a1 143 TSVAATK-AF----RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD--------------DEMQ 203 (240)
T ss_dssp CCGGGTS-CC----TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC--------------STTG
T ss_pred echhhcC-CC----CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcC--------------HhhH
Confidence 33 3321 11 1234677889877766542 5788899999987654322110 1111
Q ss_pred eeecchhhHHHHHHHHhcCcc
Q 038413 122 AVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~ 142 (191)
..+...+|||++++.++.++.
T Consensus 204 ~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 204 ALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp GGSBCHHHHHHHHHHHHTSCT
T ss_pred hcCCCHHHHHHHHHHHHcCCc
Confidence 234568999999999998764
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.59 E-value=0.0002 Score=50.85 Aligned_cols=141 Identities=8% Similarity=0.033 Sum_probs=83.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|++++.++++ +.|+++++++... + ...+.++..+++.+ -.++|.
T Consensus 52 ~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~i 130 (237)
T d1uzma1 52 VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFI 130 (237)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEE
Confidence 58899888776653 5899999998642 1 12355666777777 567663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+ .+.. .. .....|..+|..++.+.+. .|+....+.||++........... .... .....-.
T Consensus 131 sS~~~~~-~~----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~-~~~~----~~~~~pl 200 (237)
T d1uzma1 131 GSVSGLW-GI----GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDER-IQQG----ALQFIPA 200 (237)
T ss_dssp CCCCC----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHH-HHHH----HGGGCTT
T ss_pred cchhhcc-CC----cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHH-HHHH----HHhcCCC
Confidence 43 3321 11 1234577899888876543 578888999998776433221100 0000 0000000
Q ss_pred eeecchhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
.-+...+|||++++.++.+.. .. |+.+.+.|
T Consensus 201 ~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdG 233 (237)
T d1uzma1 201 KRVGTPAEVAGVVSFLASEDASYISGAVIPVDG 233 (237)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence 124578999999998887643 22 78888874
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.58 E-value=0.00016 Score=51.83 Aligned_cols=144 Identities=11% Similarity=0.138 Sum_probs=82.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|++++.++++ +.|+++++++... + ...+.++..+++.+ --++| .
T Consensus 62 ~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i 140 (251)
T d1vl8a_ 62 CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINI 140 (251)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-ccccccc
Confidence 58999888877753 5899999998642 1 12345556666555 34554 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
++ .+..... .....|..+|..++.+.+. .|+....+.||++........... .+.........-.
T Consensus 141 ~S~~~~~~~~----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~---~~~~~~~~~~~pl 213 (251)
T d1vl8a_ 141 GSLTVEEVTM----PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD---PEKLDYMLKRIPL 213 (251)
T ss_dssp CCGGGTCCCS----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC---HHHHHHHHHTCTT
T ss_pred ccchhccccC----ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC---HHHHHHHHhcCCC
Confidence 33 2221111 1134577889888776542 589999999998765433221110 0000000000000
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|||++++.++.+.. . -|+.+.+.|
T Consensus 214 ~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDG 246 (251)
T d1vl8a_ 214 GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG 246 (251)
T ss_dssp SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCc
Confidence 124568999999998887543 2 278888874
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=97.58 E-value=0.00033 Score=50.48 Aligned_cols=147 Identities=12% Similarity=0.107 Sum_probs=85.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCcc-EEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIK-RFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vk-r~v- 48 (191)
+|++|++++.++++ +.|+++|+++... + ...+.++..+++.+ -. +++
T Consensus 64 ~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~~Iv~ 142 (261)
T d1geea_ 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND-IKGTVIN 142 (261)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCCEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccc-ccccccc
Confidence 58999988877763 5799999998642 1 12355566666665 33 354
Q ss_pred cCCcccCCCCCCCCCC-chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSEFGCEEDRVRPLPP-FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~~g~~~~~~~~~~~-~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|+...... .| ...|..+|..++.+.+. .|+....+.||++............ ..........-
T Consensus 143 isS~~~~~~-----~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~---~~~~~~~~~~p 214 (261)
T d1geea_ 143 MSSVHEKIP-----WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADP---EQRADVESMIP 214 (261)
T ss_dssp ECCGGGTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSH---HHHHHHHTTCT
T ss_pred cccchhccc-----CccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCH---HHHHHHHhcCC
Confidence 344322111 12 34567889888877543 5899999999987654322211000 00000000000
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
..-+...+|||++++.++.+.. . -++.+.+.| +..+
T Consensus 215 l~R~~~pediA~~v~fL~S~~s~~itG~~i~vDG-G~sl 252 (261)
T d1geea_ 215 MGYIGEPEEIAAVAAWLASSEASYVTGITLFADG-GMTL 252 (261)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECC-CeeC
Confidence 0124568999999998886543 2 378888885 5543
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.56 E-value=0.00058 Score=48.92 Aligned_cols=142 Identities=15% Similarity=0.053 Sum_probs=82.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cc----cHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FL----DQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~----~~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ ..|+++++++... +. ..+.++..+++.+ --++|.
T Consensus 58 ~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~i 136 (254)
T d1hdca_ 58 LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNI 136 (254)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeeccc
Confidence 58999988887763 5899999998642 11 2344555556655 446653
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|| .+... . .....|..+|..++.+.+. .|+....+.||++.............+. .. ..-...
T Consensus 137 sS~~~~~~-~----~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~-~~---~~~pl~ 207 (254)
T d1hdca_ 137 SSAAGLMG-L----ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEG-NY---PNTPMG 207 (254)
T ss_dssp CCGGGTSC-C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTT-SC---TTSTTS
T ss_pred ccchhccc-c----cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHH-HH---hCCCCC
Confidence 43 33211 1 1234677889888876553 5788899999988654332221100000 00 000001
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
+--+..+|||.+++.++.+.. . -|+.+.+.|
T Consensus 208 R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDG 240 (254)
T d1hdca_ 208 RVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDG 240 (254)
T ss_dssp SCB-CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCHHHHHHHHHHHhchhhCCCCCceEEeCC
Confidence 111347999999998887543 2 378888875
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.54 E-value=0.00021 Score=50.98 Aligned_cols=143 Identities=6% Similarity=-0.042 Sum_probs=82.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|++++.++++ +.|+++++++... +.+ .+.++..+++.+ -.+++ .
T Consensus 56 ~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ 134 (242)
T d1ulsa_ 56 MDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLT 134 (242)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEE
T ss_pred EecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeee
Confidence 58999998887753 5899999998642 111 344555555555 44444 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
|+.+... ......|..+|..++.+.+. .|+....+.||++.......... ..........-..
T Consensus 135 ss~~~~~-----~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~-----~~~~~~~~~~pl~ 204 (242)
T d1ulsa_ 135 ASRVYLG-----NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE-----KVREKAIAATPLG 204 (242)
T ss_dssp CCGGGGC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH-----HHHHHHHHTCTTC
T ss_pred ccccccC-----CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH-----HHHHHHHhcCCCC
Confidence 4322111 12244677899888876553 57889999999876543221100 0000000000001
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeecCCC
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTN 155 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~ 155 (191)
-+...+|||.+++.++.+.. . -|+.+.+.| +.
T Consensus 205 R~~~pedia~~v~fL~S~~s~~itG~~i~vDG-G~ 238 (242)
T d1ulsa_ 205 RAGKPLEVAYAALFLLSDESSFITGQVLFVDG-GR 238 (242)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TT
T ss_pred CCCCHHHHHHHHHHHhchhhCCCCCcEEEECC-Cc
Confidence 24468999999998887643 2 378888875 44
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.52 E-value=0.00031 Score=50.72 Aligned_cols=148 Identities=11% Similarity=0.097 Sum_probs=84.0
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------c----ccHHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------F----LDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~----~~~~~li~aa~~~g~vkr~v 48 (191)
+|++|++++.++++ ..|+++++++... + ...+.++..+++.+ --++|
T Consensus 61 ~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii 139 (268)
T d2bgka1 61 CDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIV 139 (268)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCcc
Confidence 58999988887763 5899999998531 1 11344555566555 33443
Q ss_pred -cCC-cccCCCCCCCCCCch-hhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEE-EecC
Q 038413 49 -PSE-FGCEEDRVRPLPPFE-AYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVV-VYGN 117 (191)
Q Consensus 49 -~s~-~g~~~~~~~~~~~~~-~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~-~~~~ 117 (191)
.|+ .+.... .+.. .|..+|..++.+.+. .|+....+.||++............ ..... ....
T Consensus 140 ~iss~~~~~~~-----~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~ 212 (268)
T d2bgka1 140 FTASISSFTAG-----EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVD--SSRVEELAHQ 212 (268)
T ss_dssp EECCGGGTCCC-----TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCC--HHHHHHHHHH
T ss_pred ccccccccccc-----cccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCC--HHHHHHHHHh
Confidence 333 222111 1222 455789888877553 5888899999987664432221110 00000 0000
Q ss_pred C-cceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 118 G-EAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 118 g-~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
. ....-+...+|||++++.++.+.. . -|+.+.+.| +-..
T Consensus 213 ~~~~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDG-G~t~ 254 (268)
T d2bgka1 213 AANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDG-GYTR 254 (268)
T ss_dssp TCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred ccccCCCCcCHHHHHHHHHHHhChhhCCccCceEEECc-Cccc
Confidence 0 001125678999999999887643 2 378888885 5433
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.52 E-value=0.00084 Score=48.18 Aligned_cols=146 Identities=9% Similarity=0.023 Sum_probs=75.8
Q ss_pred CCCCCHHHHHHhhc-------c-CcEEEEccCCCC-------------------cc----cHHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------E-VDVVISTVAYPQ-------------------FL----DQLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g-~d~V~~~~~~~~-------------------~~----~~~~li~aa~~~g~vkr~v~ 49 (191)
+|++|.+++.++++ | .|+++++++... +. ..+.++..+++.+ --++|.
T Consensus 64 ~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~ 142 (259)
T d1xq1a_ 64 CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIF 142 (259)
T ss_dssp CCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccc
Confidence 58888887766542 4 799999998642 11 2344555566555 446553
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
|+ .+... . .....|..+|..+..+.+. .|+....+.||++............ .........-
T Consensus 143 isS~~~~~~-~----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~----~~~~~~~~~p 213 (259)
T d1xq1a_ 143 MSSIAGVVS-A----SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE----FKKVVISRKP 213 (259)
T ss_dssp EC---------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------
T ss_pred ccccccccc-c----cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH----HHHHHHhCCC
Confidence 33 33211 1 1134577889888876542 5899999999987654332221110 0000100000
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
..-+...+|||.+++-++.+.. . -|+.+.+.| +-.+
T Consensus 214 l~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDG-G~s~ 251 (259)
T d1xq1a_ 214 LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDG-GLTV 251 (259)
T ss_dssp ----CCGGGGHHHHHHHTSGGGTTCCSCEEECCC-CEEE
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCC-CEEC
Confidence 0124578999999998886543 2 267888875 5443
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=97.50 E-value=0.00019 Score=51.19 Aligned_cols=141 Identities=12% Similarity=0.092 Sum_probs=83.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|.+++.++++ +.|+++++++... + ...+.++..+++.+ --++| .
T Consensus 57 ~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~i 135 (243)
T d1q7ba_ 57 LNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITI 135 (243)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred EEecCHHHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeee
Confidence 58999888877664 5899999988643 1 12355556666655 34555 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|| .+.... .....|..+|..++.+.+. .|+....+.||++.......... ... .......-.
T Consensus 136 sS~~~~~~~-----~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~----~~~-~~~~~~~pl 205 (243)
T d1q7ba_ 136 GSVVGTMGN-----GGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSD----DQR-AGILAQVPA 205 (243)
T ss_dssp CCHHHHHCC-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH----HHH-HHHHTTCTT
T ss_pred cchhhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhh----hHH-HHHHhcCCC
Confidence 43 332111 1234677899888877553 58889999999876543222110 000 000000000
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|||+++..++.+.. . -|+.+.+.|
T Consensus 206 ~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdG 238 (243)
T d1q7ba_ 206 GRLGGAQEIANAVAFLASDEAAYITGETLHVNG 238 (243)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence 124578999999999887543 2 378888875
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=0.00058 Score=48.59 Aligned_cols=143 Identities=10% Similarity=0.051 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------ccc----HHHHHHHHH-HcCCccEEE-cCC-
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLD----QLKIVHAIK-VAGNIKRFL-PSE- 51 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~----~~~li~aa~-~~g~vkr~v-~s~- 51 (191)
+|++|.++++++++ ..|+++++++... +.+ .+.++..+. +.+ --+++ .|+
T Consensus 59 ~Dv~d~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~ 137 (244)
T d1pr9a_ 59 VDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-PGAIVNVSSQ 137 (244)
T ss_dssp CCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-CEEEEEECCG
T ss_pred EeCCCHHHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCC-cceEeecccc
Confidence 58999999988875 6799999988643 112 233444332 323 23444 233
Q ss_pred cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeee
Q 038413 52 FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 52 ~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
.+... . .....|..+|..++.+.+. .|+....+.||++.......... ........-...-..-+
T Consensus 138 ~~~~~-~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~---~~~~~~~~~~~~pl~R~ 209 (244)
T d1pr9a_ 138 CSQRA-V----TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS---DPHKAKTMLNRIPLGKF 209 (244)
T ss_dssp GGTSC-C----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSC---SHHHHHHHHTTCTTCSC
T ss_pred ccccc-c----cchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhcc---ChHHHHHHHhcCCCCCC
Confidence 33211 1 1134566889888776543 57888999999887653322111 00000000000000125
Q ss_pred cchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 125 NYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
...+|||++++.++.+.. . -|+.+.+.|
T Consensus 210 ~~peevA~~v~fL~S~~a~~itG~~i~vDG 239 (244)
T d1pr9a_ 210 AEVEHVVNAILFLLSDRSGMTTGSTLPVEG 239 (244)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cCHHHHHHHHHHHhCchhCCcCCcEEEECc
Confidence 678999999998887543 2 367888874
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.44 E-value=0.00029 Score=50.46 Aligned_cols=141 Identities=12% Similarity=0.146 Sum_probs=81.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|++++.++++ +.|+++++++... +.+ .+.++..+++.+ --++|.
T Consensus 66 ~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVni 144 (251)
T d2c07a1 66 GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINI 144 (251)
T ss_dssp CCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEE
Confidence 58999998887764 6899999988642 112 345556666665 456663
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|| .+... . .....|..+|..++.+.+. .|+....+.||++.......... ..........-.
T Consensus 145 sS~~~~~~-~----~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~-----~~~~~~~~~~pl 214 (251)
T d2c07a1 145 SSIVGLTG-N----VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE-----QIKKNIISNIPA 214 (251)
T ss_dssp CCTHHHHC-C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH-----HHHHHHHTTCTT
T ss_pred CCHHhcCC-C----CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCH-----HHHHHHHhcCCC
Confidence 33 33211 1 1234677899888877553 57889999999876543222100 000000000000
Q ss_pred eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-+...+|||++++.++.+.. . -|+.+.+.|
T Consensus 215 ~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDG 247 (251)
T d2c07a1 215 GRMGTPEEVANLACFLSSDKSGYINGRVFVIDG 247 (251)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence 124578999999988887643 2 267888874
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.40 E-value=0.0004 Score=49.39 Aligned_cols=145 Identities=12% Similarity=0.102 Sum_probs=81.3
Q ss_pred CCCCCHHHHHHhhc---cCcEEEEccCCCC-------------------cccHHHH----HHHHHHcCCccEEE-cCCcc
Q 038413 1 GELDEHEKIVSILK---EVDVVISTVAYPQ-------------------FLDQLKI----VHAIKVAGNIKRFL-PSEFG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~---g~d~V~~~~~~~~-------------------~~~~~~l----i~aa~~~g~vkr~v-~s~~g 53 (191)
+|++|.++++++++ +.|+++|+++... +.+...+ +..+.+.+.--++| .++..
T Consensus 57 ~Dv~~~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 136 (242)
T d1cyda_ 57 VDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMV 136 (242)
T ss_dssp CCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred EeCCCHHHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhh
Confidence 58999999998886 5799999998642 1222333 33322222023444 34322
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecc
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNY 126 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 126 (191)
..... .....|..+|..++.+.+. .|+....+.||++..+........ .+.........-..-+..
T Consensus 137 ~~~~~----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~---~~~~~~~~~~~pl~R~~~ 209 (242)
T d1cyda_ 137 AHVTF----PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD---PEFARKLKERHPLRKFAE 209 (242)
T ss_dssp GTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC---HHHHHHHHHHSTTSSCBC
T ss_pred ccccC----CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC---HHHHHHHHhcCCCCCCcC
Confidence 21111 1234577889888877653 578889999998876533222110 000000000000012467
Q ss_pred hhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 127 EEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 127 ~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+|||++++.++.+.. . -|+.+.+.|
T Consensus 210 peeva~~v~fL~S~~s~~itG~~i~vDG 237 (242)
T d1cyda_ 210 VEDVVNSILFLLSDRSASTSGGGILVDA 237 (242)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred HHHHHHHHHHHhCchhcCcCCceEEeCc
Confidence 8999999998886543 2 378888874
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=97.40 E-value=0.00049 Score=49.42 Aligned_cols=149 Identities=10% Similarity=0.114 Sum_probs=83.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------ccc----HHHHHHHHHHcCCccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLD----QLKIVHAIKVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~----~~~li~aa~~~g~vkr~v- 48 (191)
+|++|++++.++++ +.|+++++++... +.+ .+.++..+++.+ --++|
T Consensus 62 ~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~ 140 (258)
T d1iy8a_ 62 ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVN 140 (258)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcc
Confidence 58999998877653 5899999998531 112 234444555444 34555
Q ss_pred cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccC---CCCCCceEEEecC
Q 038413 49 PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLR---PFEPHDDVVVYGN 117 (191)
Q Consensus 49 ~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~---~~~~~~~~~~~~~ 117 (191)
.|| .+.. .. .....|..+|..+..+.+ ..|+....+.||++.......... .............
T Consensus 141 isS~~~~~-~~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 215 (258)
T d1iy8a_ 141 TASVGGIR-GI----GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQ 215 (258)
T ss_dssp ECCGGGTS-BC----SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHT
T ss_pred cccHhhcc-CC----CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHh
Confidence 343 3321 11 123467788988876654 258999999999886543222110 0000000000000
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCc
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNI 156 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~ 156 (191)
..-..-+...+|||.+++.++.+.. . -|+.+.+.| +..
T Consensus 216 ~~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDG-G~s 255 (258)
T d1iy8a_ 216 VNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG-GQS 255 (258)
T ss_dssp TCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST-TTT
T ss_pred cCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCc-chh
Confidence 0000124578999999998887543 2 368888885 544
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.38 E-value=0.00048 Score=50.51 Aligned_cols=146 Identities=5% Similarity=-0.071 Sum_probs=80.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|+++++++... +.+. +.++..+++.+ -.++|.
T Consensus 73 ~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ 151 (297)
T d1yxma1 73 CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNI 151 (297)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccc
Confidence 58999988877653 5899999988542 1222 33344444444 334443
Q ss_pred CCcccCCCCCCCCCC-chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SEFGCEEDRVRPLPP-FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~~g~~~~~~~~~~~-~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|+-+. .. .| ...|..+|..++.+.+. .|+....+.||++............ ......-.- ...+
T Consensus 152 ss~~~-~~-----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~-~~~p 223 (297)
T d1yxma1 152 IVPTK-AG-----FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSW-GQSFFEGSF-QKIP 223 (297)
T ss_dssp CCCCT-TC-----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGG-GGGGGTTGG-GGST
T ss_pred ccccc-cc-----ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhcccc-CHHHHHHHH-hcCC
Confidence 32111 11 12 33456789888876553 5788889999987654321111000 000000000 0000
Q ss_pred -eeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCc
Q 038413 122 -AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNI 156 (191)
Q Consensus 122 -~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~ 156 (191)
.-+...+|||.+++.++.+.. . -|+.+.+.| +..
T Consensus 224 lgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDG-G~s 260 (297)
T d1yxma1 224 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDG-GRS 260 (297)
T ss_dssp TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST-TGG
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCc-Chh
Confidence 124568999999999887643 2 378888875 543
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=97.37 E-value=0.0008 Score=48.13 Aligned_cols=149 Identities=11% Similarity=0.114 Sum_probs=81.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|+++|+++... +.+. +.++..+++.+.-.+++.
T Consensus 57 ~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~i 136 (255)
T d1gega_ 57 VDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINA 136 (255)
T ss_dssp CCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred eeCCCHHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccc
Confidence 58999888877653 5899999998642 1223 334444445541234443
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc-------CCCCCCceEEEe
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL-------RPFEPHDDVVVY 115 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~-------~~~~~~~~~~~~ 115 (191)
|+....... .....|..+|..++.+.+. .|+....+.||++..+...... ... ........
T Consensus 137 sS~~~~~~~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~-~~~~~~~~ 211 (255)
T d1gega_ 137 CSQAGHVGN----PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKP-LGYGTAEF 211 (255)
T ss_dssp CCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCC-TTHHHHHH
T ss_pred cchhhcccC----cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhccc-chhHHHHH
Confidence 432211111 1134566789888766543 5888999999987654322110 000 00000000
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCC
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTN 155 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~ 155 (191)
....-..-+...+|||++++.++.+.. . -|+.+.+.| +-
T Consensus 212 ~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDG-G~ 252 (255)
T d1gega_ 212 AKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG-GM 252 (255)
T ss_dssp HTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS-SS
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecC-CE
Confidence 000000124678999999998887543 2 378888875 44
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.00059 Score=48.90 Aligned_cols=142 Identities=8% Similarity=0.108 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------ccc----HHHHHHHHHHcCCccEEE-cC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------FLD----QLKIVHAIKVAGNIKRFL-PS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------~~~----~~~li~aa~~~g~vkr~v-~s 50 (191)
+|++|++++.++++ +.|+++++++... +.+ .+.++..+++.+ -.++| .|
T Consensus 67 ~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~is 145 (255)
T d1fmca_ 67 CDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTIT 145 (255)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-cccccccc
Confidence 58999888776653 6899999998642 112 344555556655 34544 34
Q ss_pred C-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 51 E-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 51 ~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
+ .+... . .....|..+|..++.+.+. .|+....+.||++................ ........
T Consensus 146 S~~~~~~-~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~----~~~~~pl~ 216 (255)
T d1fmca_ 146 SMAAENK-N----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQK----MLQHTPIR 216 (255)
T ss_dssp CGGGTCC-C----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHH----HHHTCSSC
T ss_pred ccchhcc-c----cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHH----HHhcCCCC
Confidence 4 22211 1 1234677889888776543 57888999999876543322111000000 00000001
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
-+...+|||.+++.++.+.. . -|+.+.+.|
T Consensus 217 R~g~pedvA~~v~fL~S~~s~~itG~~i~vDG 248 (255)
T d1fmca_ 217 RLGQPQDIANAALFLCSPAASWVSGQILTVSG 248 (255)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCcCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence 24568999999999887543 2 378888885
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.36 E-value=0.0011 Score=47.31 Aligned_cols=144 Identities=10% Similarity=0.052 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cc----cHHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FL----DQLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~----~~~~li~aa~~~g~vkr~v-~ 49 (191)
+|+.|.+++.++++ +.|+++++++... +. ..+.++..+++.+ -++| .
T Consensus 59 ~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--G~Iv~i 136 (253)
T d1hxha_ 59 HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINM 136 (253)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEE
T ss_pred eecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC--Cceecc
Confidence 58888887776653 5799999998642 11 2344555555544 2444 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------c--CCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------V--EIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~--~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
|| .+.. .. .....|..+|..+..+.+. . ++....+.||++...................-. ...
T Consensus 137 sS~~~~~-~~----~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~-~~~ 210 (253)
T d1hxha_ 137 ASVSSWL-PI----EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHD-PKL 210 (253)
T ss_dssp CCGGGTS-CC----TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCB-TTT
T ss_pred cchhhhc-Cc----cccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhC-ccc
Confidence 43 3321 11 1234577888877766542 2 367778999987654332211100000000000 001
Q ss_pred ce-eeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 120 AK-AVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 120 ~~-~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.+ --+...+|||++++.++.+.. . -|+.+.+.|
T Consensus 211 ~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDG 246 (253)
T d1hxha_ 211 NRAGRAYMPERIAQLVLFLASDESSVMSGSELHADN 246 (253)
T ss_dssp BTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred cccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECc
Confidence 11 135568999999998887543 2 278888874
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=97.27 E-value=0.0011 Score=47.25 Aligned_cols=142 Identities=12% Similarity=0.123 Sum_probs=79.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCcc-EEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIK-RFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vk-r~v- 48 (191)
+|++|.+++.++++ +.|+++++++... +.+ .+.++..+++.+ -. ++|
T Consensus 61 ~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~-~gg~Ii~ 139 (251)
T d1zk4a1 61 HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIIN 139 (251)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcC-CCCceEe
Confidence 58999888777653 5799999998642 122 244445555555 33 544
Q ss_pred cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHH---------hcCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 49 PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIE---------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 49 ~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
.|+ .+.. .. .....|..+|..+..+.+ ..|+....+.||++............ ........
T Consensus 140 isS~~~~~-~~----~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~~~~~ 210 (251)
T d1zk4a1 140 MSSIEGFV-GD----PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE----EAMSQRTK 210 (251)
T ss_dssp ECCGGGTS-CC----TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH----HHHTSTTT
T ss_pred eeccceec-cC----CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH----HHHHHHhC
Confidence 344 3321 11 113456678877665432 34788888999988654332221100 00000000
Q ss_pred cceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
.-..-+...+|||.+++.++.+.. . -|+.+.+.|
T Consensus 211 ~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDG 246 (251)
T d1zk4a1 211 TPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDG 246 (251)
T ss_dssp CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECc
Confidence 000124578999999998886543 2 277888874
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.27 E-value=0.0027 Score=46.50 Aligned_cols=140 Identities=11% Similarity=0.033 Sum_probs=84.4
Q ss_pred cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEE-cCC-cccCCCCCCCCCCchhhH
Q 038413 15 EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFL-PSE-FGCEEDRVRPLPPFEAYL 69 (191)
Q Consensus 15 g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v-~s~-~g~~~~~~~~~~~~~~~~ 69 (191)
+.|++|+++|... + ...+.++..+++.+ --++| .|| .+... . .....|.
T Consensus 90 ~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~-~----~~~~~Y~ 163 (302)
T d1gz6a_ 90 RIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYG-N----FGQANYS 163 (302)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC-C----TTCHHHH
T ss_pred CCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCC-C----CCcHHHH
Confidence 6899999998642 1 12355666676665 44665 343 22211 1 1134577
Q ss_pred HHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcc
Q 038413 70 EKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 70 ~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
.+|..+..+.+. .|+....+.||.......... .+....+...+|||.+++-++.+..
T Consensus 164 asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~---------------~~~~~~~~~PedvA~~v~fL~S~~a 228 (302)
T d1gz6a_ 164 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM---------------PEDLVEALKPEYVAPLVLWLCHESC 228 (302)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS---------------CHHHHHHSCGGGTHHHHHHHTSTTC
T ss_pred HHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC---------------cHhhHhcCCHHHHHHHHHHHcCCCc
Confidence 899888877553 578888999986543211110 0111234567999999988775432
Q ss_pred cC-CceeEeecC------------------CCccCHHHHHHHHHHHhCCceE
Q 038413 143 TC-NRIVIYRPQ------------------TNIISQLELISLWEQKTGRSFK 175 (191)
Q Consensus 143 ~~-~~~~~i~~~------------------~~~~t~~e~~~~~~~~~g~~~~ 175 (191)
.. |+.+.+.|| ++..|..++++.+.++...+-.
T Consensus 229 ~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~~~ 280 (302)
T d1gz6a_ 229 EENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSNA 280 (302)
T ss_dssp CCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTTC
T ss_pred CCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcccC
Confidence 22 555554421 2457899999999999875533
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=97.23 E-value=0.002 Score=45.91 Aligned_cols=127 Identities=10% Similarity=0.103 Sum_probs=77.0
Q ss_pred CCCCCHHHHHHhhc------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcCCccEEEc-CC-cc
Q 038413 1 GELDEHEKIVSILK------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAGNIKRFLP-SE-FG 53 (191)
Q Consensus 1 gD~~d~~~l~~a~~------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g~vkr~v~-s~-~g 53 (191)
+|++|.+++.++++ +.|.|+|+++... +.+..++.++++..+ ..++|. || .+
T Consensus 69 ~Dv~d~~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~ 147 (259)
T d2fr1a1 69 CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFAS 147 (259)
T ss_dssp CCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHH
T ss_pred cccchHHHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhh
Confidence 58999998887764 4789999988643 234566777777776 677663 43 22
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHH---hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhH
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIE---AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDI 130 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dv 130 (191)
.. .. .....|..+|..++.+.+ ..|++.+.+.||.+.+.++..... . .... ..-...+..+++
T Consensus 148 ~~-g~----~~~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~---~----~~~~--~~G~~~~~~~~~ 213 (259)
T d2fr1a1 148 AF-GA----PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPV---A----DRFR--RHGVIEMPPETA 213 (259)
T ss_dssp HT-CC----TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------------CT--TTTEECBCHHHH
T ss_pred cc-CC----cccHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccchH---H----HHHH--hcCCCCCCHHHH
Confidence 21 11 112347778877765543 479999999999877644322100 0 0000 011345778999
Q ss_pred HHHHHHHhcCcc
Q 038413 131 AKCTIKVINDPR 142 (191)
Q Consensus 131 a~~~~~~l~~~~ 142 (191)
++++..++..++
T Consensus 214 ~~~l~~~l~~~~ 225 (259)
T d2fr1a1 214 CRALQNALDRAE 225 (259)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHhCCC
Confidence 999999998764
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.21 E-value=0.0008 Score=47.84 Aligned_cols=141 Identities=13% Similarity=0.075 Sum_probs=81.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|.+++.++++ +.|+++++++... + ...+.++..+++.+ --++| .
T Consensus 58 ~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVni 136 (244)
T d1edoa_ 58 GDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINI 136 (244)
T ss_dssp CCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEE
Confidence 58999988877653 5799999998642 1 12355566666655 34655 3
Q ss_pred CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce
Q 038413 50 SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK 121 (191)
Q Consensus 50 s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 121 (191)
|| .+... . .....|..+|..+..+.+. .|+....+.||++.......... ..........-.
T Consensus 137 sS~~~~~~-~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~-----~~~~~~~~~~pl 206 (244)
T d1edoa_ 137 ASVVGLIG-N----IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE-----DMEKKILGTIPL 206 (244)
T ss_dssp CCTHHHHC-C----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH-----HHHHHHHTSCTT
T ss_pred cChhhcCC-C----CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhH-----HHHHHHHhcCCC
Confidence 44 33211 1 1134577889888777553 58889999999876543222110 000000000000
Q ss_pred eeecchhhHHHHHHHHhcCcc--c-CCceeEeec
Q 038413 122 AVFNYEEDIAKCTIKVINDPR--T-CNRIVIYRP 152 (191)
Q Consensus 122 ~~~i~~~Dva~~~~~~l~~~~--~-~~~~~~i~~ 152 (191)
.-+...+|||+++..+...++ . -|+.+.+.|
T Consensus 207 ~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdG 240 (244)
T d1edoa_ 207 GRTGQPENVAGLVEFLALSPAASYITGQAFTIDG 240 (244)
T ss_dssp CSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCC
Confidence 124578999999988754332 2 367788874
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.19 E-value=0.0014 Score=46.14 Aligned_cols=142 Identities=14% Similarity=0.138 Sum_probs=79.8
Q ss_pred CCCC-HHHHHHhhccCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEE-cCCcccCC
Q 038413 2 ELDE-HEKIVSILKEVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFL-PSEFGCEE 56 (191)
Q Consensus 2 D~~d-~~~l~~a~~g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v-~s~~g~~~ 56 (191)
|+.+ .+.+.+.+...|+++++++... + ...+.++..+++.+ --++| .++.....
T Consensus 52 Dv~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~ 130 (234)
T d1o5ia_ 52 DLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVIS 130 (234)
T ss_dssp CTTTCHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS
T ss_pred chHHHHHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccc
Confidence 5654 4556666778999999998542 1 12355566666665 44554 33322111
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhh
Q 038413 57 DRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEED 129 (191)
Q Consensus 57 ~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~D 129 (191)
.. .....|..+|..++.+.+. .|+....+.||++........... ..........-..-+...+|
T Consensus 131 ~~----~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~----~~~~~~~~~~pl~R~~~ped 202 (234)
T d1o5ia_ 131 PI----ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE----EKKKQVESQIPMRRMAKPEE 202 (234)
T ss_dssp CC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH----HHHHHHHTTSTTSSCBCHHH
T ss_pred cc----cccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH----HHHHHHHhcCCCCCCcCHHH
Confidence 11 1234566788888766442 578888999998765433221110 00000000000112567999
Q ss_pred HHHHHHHHhcCcc-c-CCceeEeec
Q 038413 130 IAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 130 va~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
||.++..++.+.. . -|+.+.+.|
T Consensus 203 iA~~v~fL~S~~s~~itG~~i~vDG 227 (234)
T d1o5ia_ 203 IASVVAFLCSEKASYLTGQTIVVDG 227 (234)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHhChhhcCCcCcEEEECc
Confidence 9999988886543 2 278888875
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.17 E-value=0.00015 Score=52.01 Aligned_cols=153 Identities=8% Similarity=0.007 Sum_probs=84.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------c----ccHHHHHHHHHHcC--CccEEE-cCC-ccc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------F----LDQLKIVHAIKVAG--NIKRFL-PSE-FGC 54 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------~----~~~~~li~aa~~~g--~vkr~v-~s~-~g~ 54 (191)
+|++|.+++.++++ +.|+++++++... + ...+..+..+++.+ .--++| .|| .+.
T Consensus 61 ~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~ 140 (254)
T d2gdza1 61 CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL 140 (254)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred eecCCHHHHHHHHHHHHHHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc
Confidence 58999888877663 5899999998754 1 22344455554432 012354 243 332
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHH---------hcCCCeEEEecccccccccccccCCC-C-CC-ceEEEecCCccee
Q 038413 55 EEDRVRPLPPFEAYLEKKRIVRRAIE---------AVEIPYTFVSANCYGAYFVNVLLRPF-E-PH-DDVVVYGNGEAKA 122 (191)
Q Consensus 55 ~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~tilrp~~~~~~~~~~~~~~~-~-~~-~~~~~~~~g~~~~ 122 (191)
.. . .....|..+|..++.+.+ ..|+....+.||++............ . .. .............
T Consensus 141 ~~-~----~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 215 (254)
T d2gdza1 141 MP-V----AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY 215 (254)
T ss_dssp SC-C----TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH
T ss_pred cC-C----CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCC
Confidence 11 1 113456778887765432 35788889999987654332221100 0 00 0000000000001
Q ss_pred eecchhhHHHHHHHHhcCcccCCceeEeecCCCccCH
Q 038413 123 VFNYEEDIAKCTIKVINDPRTCNRIVIYRPQTNIISQ 159 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~t~ 159 (191)
-+...+|||++++.++.++.--|+.+.+.| +..+.+
T Consensus 216 r~~~pedvA~~v~fL~s~~~itG~~i~VdG-G~~~~~ 251 (254)
T d2gdza1 216 GILDPPLIANGLITLIEDDALNGAIMKITT-SKGIHF 251 (254)
T ss_dssp CCBCHHHHHHHHHHHHHCTTCSSCEEEEET-TTEEEE
T ss_pred CCcCHHHHHHHHHHHHcCCCCCCCEEEECC-CCeeec
Confidence 245689999999999987643478888985 665544
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.17 E-value=0.00037 Score=49.88 Aligned_cols=148 Identities=8% Similarity=0.094 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------cc----cHHHHHHHHHHcCCccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FL----DQLKIVHAIKVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~----~~~~li~aa~~~g~vkr~v- 48 (191)
+|++|.+++.++++ +.|+++++++... +. ..+.++..+++.+ -++|
T Consensus 58 ~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~Ii~ 135 (250)
T d1ydea1 58 CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVIN 135 (250)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC--CCCcc
Confidence 58999888887653 5899999998531 11 1344455555543 2444
Q ss_pred cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCC-ceEEEecCCc
Q 038413 49 PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPH-DDVVVYGNGE 119 (191)
Q Consensus 49 ~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~-~~~~~~~~g~ 119 (191)
.|| .+.... .....|..+|..++.+.+. .|+....+.||++..+..........+. ..+.-.-...
T Consensus 136 isS~~~~~~~-----~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~ 210 (250)
T d1ydea1 136 ISSLVGAIGQ-----AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ 210 (250)
T ss_dssp ECCHHHHHCC-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS
T ss_pred cccccccccc-----cCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcC
Confidence 343 332111 1234677899888877542 5899999999988654332221100000 0000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCcccC-CceeEeecCCCc
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPRTC-NRIVIYRPQTNI 156 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~i~~~~~~ 156 (191)
-..-+...+|||.+++.++.+.... ++.+.+.| +-.
T Consensus 211 pl~R~g~p~eva~~v~fL~Sda~~itG~~i~vDG-G~~ 247 (250)
T d1ydea1 211 PLGRMGQPAEVGAAAVFLASEANFCTGIELLVTG-GAE 247 (250)
T ss_dssp TTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEEST-TTT
T ss_pred CCCCCCCHHHHHHHHHHHhCccCCCcCCeEEECC-Ccc
Confidence 0012457899999998877543332 67788875 443
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.15 E-value=0.00062 Score=48.89 Aligned_cols=146 Identities=10% Similarity=0.083 Sum_probs=80.5
Q ss_pred CCCCCHHHHHHhhc--------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEE-
Q 038413 1 GELDEHEKIVSILK--------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~--------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v- 48 (191)
+|++|++++.++++ ..|+++++++... +.+ .+.++..+++.+ --++|
T Consensus 64 ~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~ 142 (259)
T d2ae2a_ 64 CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVF 142 (259)
T ss_dssp CCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEE
T ss_pred eeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-cccccc
Confidence 58899888776542 3799999998642 112 234445555554 34555
Q ss_pred cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcc
Q 038413 49 PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEA 120 (191)
Q Consensus 49 ~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (191)
.|+ .+... . .....|..+|..++.+.+. .|+....+.||++...............+...-.-...-
T Consensus 143 isS~~~~~~-~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~p 217 (259)
T d2ae2a_ 143 ISSVSGALA-V----PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA 217 (259)
T ss_dssp ECCGGGTSC-C----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST
T ss_pred ccccccccc-c----ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCC
Confidence 333 33211 1 1134566899888877553 478888899998765433221110000000000000000
Q ss_pred eeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 121 KAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 121 ~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..-+...+|||++++-++.+.. . -|+.+.+.|
T Consensus 218 l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG 251 (259)
T d2ae2a_ 218 LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG 251 (259)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence 0124568999999998887543 2 278888874
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.10 E-value=0.0021 Score=46.02 Aligned_cols=144 Identities=13% Similarity=0.080 Sum_probs=77.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cc----cHHHHHHHHHHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FL----DQLKIVHAIKVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~----~~~~li~aa~~~g~vkr 46 (191)
+|++|.+++.++++ +.|+++++++... +. ..+.++..+++.+ -..
T Consensus 64 ~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~i 142 (264)
T d1spxa_ 64 ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEI 142 (264)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccc
Confidence 58999888877653 5899999987531 11 1244455555554 234
Q ss_pred EEc-CCcccCCCCCCCCCCc-hhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 47 FLP-SEFGCEEDRVRPLPPF-EAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 47 ~v~-s~~g~~~~~~~~~~~~-~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
++. |+.+.... .|. ..|..+|..++.+.+. .|+....+.||++................. ....
T Consensus 143 I~~~S~~~~~~~-----~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~--~~~~ 215 (264)
T d1spxa_ 143 VNISSIASGLHA-----TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKK--FYST 215 (264)
T ss_dssp EEECCTTSSSSC-----CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----------------HHH
T ss_pred eeeeeecccccc-----CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHH--HHHH
Confidence 443 33221111 223 3466789888766542 589999999998765432221111000000 0000
Q ss_pred -----Ccce-eeecchhhHHHHHHHHhcCc--cc-CCceeEeec
Q 038413 118 -----GEAK-AVFNYEEDIAKCTIKVINDP--RT-CNRIVIYRP 152 (191)
Q Consensus 118 -----g~~~-~~~i~~~Dva~~~~~~l~~~--~~-~~~~~~i~~ 152 (191)
...+ .-+...+|||++++-++.++ .+ -|+.+.+.|
T Consensus 216 ~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDG 259 (264)
T d1spxa_ 216 MATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG 259 (264)
T ss_dssp HHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred HHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCC
Confidence 0000 11457899999999888654 22 367888875
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.08 E-value=0.0013 Score=46.97 Aligned_cols=153 Identities=10% Similarity=0.055 Sum_probs=82.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|++++.++++ +.|+++++++... +.+. +.++..+.+.+.--++| .
T Consensus 58 ~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~i 137 (256)
T d1k2wa_ 58 LDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINM 137 (256)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred eeCCCHHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccc
Confidence 58999998887763 5899999998642 1222 23333333332123555 3
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc----CC-CC-CCceEEEec
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL----RP-FE-PHDDVVVYG 116 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~----~~-~~-~~~~~~~~~ 116 (191)
|+....... .....|..+|..++.+.+. .|+....+.||++......... .. .. .........
T Consensus 138 sS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (256)
T d1k2wa_ 138 ASQAGRRGE----ALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVG 213 (256)
T ss_dssp CCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred cchhhcccc----ccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHH
Confidence 432211111 1134566789888876543 5788899999987654321110 00 00 000000000
Q ss_pred CCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCccC
Q 038413 117 NGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 117 ~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
...-..-+...+|||.+++-++.+.. . -|+.+.+.| +..+|
T Consensus 214 ~~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDG-G~~ms 256 (256)
T d1k2wa_ 214 AAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDG-GNWMS 256 (256)
T ss_dssp HHSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEEST-TSSCC
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECc-chhhC
Confidence 00000124578999999998776543 2 278888885 66554
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.06 E-value=0.00096 Score=47.78 Aligned_cols=147 Identities=12% Similarity=0.107 Sum_probs=80.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccH----HHHHHHHHHcCCccEEEcC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQ----LKIVHAIKVAGNIKRFLPS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~----~~li~aa~~~g~vkr~v~s 50 (191)
+|++|.+++.+.++ +.|+++++++... +.+. +.++..+++.| --.++.|
T Consensus 63 ~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g-~~iii~s 141 (259)
T d1ja9a_ 63 ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGG-RIILTSS 141 (259)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEE-EEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCC-ccccccc
Confidence 58889888877654 5799999998653 1122 33333333444 1123344
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccC-------CCCCCce-EEEe
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLR-------PFEPHDD-VVVY 115 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~-------~~~~~~~-~~~~ 115 (191)
+.+..... .....|..+|..++.+.+. .|+....+.||++.......... ....... ....
T Consensus 142 ~~~~~~~~----~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (259)
T d1ja9a_ 142 IAAVMTGI----PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGL 217 (259)
T ss_dssp GGGTCCSC----CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHH
T ss_pred ccccccCC----CCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHH
Confidence 43322111 1133466789888777653 58999999999886543221110 0000000 0000
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
.......-+...+|||++++.++.+.. .. |+.+.+.|
T Consensus 218 ~~~~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDG 256 (259)
T d1ja9a_ 218 ANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTG 256 (259)
T ss_dssp HHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCC
Confidence 000001125679999999999887654 22 67777774
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.02 E-value=0.0025 Score=45.85 Aligned_cols=147 Identities=13% Similarity=0.151 Sum_probs=81.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHH----HHHHcCCccEEEcC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVH----AIKVAGNIKRFLPS 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~----aa~~~g~vkr~v~s 50 (191)
+|+.|++++.+.++ +.|++++.++... +.+...+.+ .+++.| --.++.|
T Consensus 75 ~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g-~~i~i~s 153 (272)
T d1g0oa_ 75 ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGG-RLILMGS 153 (272)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTC-EEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccc-ccccccc
Confidence 58888888776653 5799999988642 122333333 333444 2223444
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCC-CCCceEE-------Ee
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPF-EPHDDVV-------VY 115 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~-~~~~~~~-------~~ 115 (191)
+.+..... .....|..+|..++.+.+. .|+....+.||++.......+.... ....... ..
T Consensus 154 ~~~~~~~~----~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (272)
T d1g0oa_ 154 ITGQAKAV----PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAA 229 (272)
T ss_dssp GGGTCSSC----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHH
T ss_pred cccccccc----cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHH
Confidence 44332111 1233466789888777652 5899999999998765432221100 0000000 00
Q ss_pred cCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 116 GNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 116 ~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
....-..-+...+|||.++..++.+.. + -|+.+.+.|
T Consensus 230 ~~~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDG 268 (272)
T d1g0oa_ 230 VQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG 268 (272)
T ss_dssp HHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HccCCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECC
Confidence 000000125678999999999887643 2 367788875
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.91 E-value=0.0022 Score=45.73 Aligned_cols=145 Identities=11% Similarity=0.082 Sum_probs=81.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHH------HcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIK------VAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~------~~g~vkr~v 48 (191)
+|++|++++.++++ +.|+++++++... +.+...+.+++. +.+ --+++
T Consensus 58 ~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii 136 (257)
T d2rhca1 58 CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIV 136 (257)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEE
T ss_pred eecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Ccccc
Confidence 58999988877653 5899999998642 233455555443 334 33554
Q ss_pred c-CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc----C-CCCCC-ceEE
Q 038413 49 P-SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL----R-PFEPH-DDVV 113 (191)
Q Consensus 49 ~-s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~----~-~~~~~-~~~~ 113 (191)
. ++ .+... . .....|..+|..+..+.+. .|+....+.||++......... . ..... +...
T Consensus 137 ~i~S~~~~~~-~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~ 211 (257)
T d2rhca1 137 NIASTGGKQG-V----VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD 211 (257)
T ss_dssp EECCGGGTSC-C----TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred cccccccccc-c----ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHH
Confidence 3 33 33211 1 1134577899888877653 4678888999987654322110 0 00000 0000
Q ss_pred EecCCcce-eeecchhhHHHHHHHHhcCcc-cC-CceeEeec
Q 038413 114 VYGNGEAK-AVFNYEEDIAKCTIKVINDPR-TC-NRIVIYRP 152 (191)
Q Consensus 114 ~~~~g~~~-~~~i~~~Dva~~~~~~l~~~~-~~-~~~~~i~~ 152 (191)
..-.. .+ .-+...+|||++++-++.+.. .. |+.+.+.|
T Consensus 212 ~~~~~-~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDG 252 (257)
T d2rhca1 212 RITAR-VPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCG 252 (257)
T ss_dssp HHHTT-STTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHhc-CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence 00000 01 124678999999998886543 22 78888874
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=96.89 E-value=0.0024 Score=45.62 Aligned_cols=146 Identities=8% Similarity=0.072 Sum_probs=78.3
Q ss_pred CCCCCHHHHHHhhc-------c-CcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEEc
Q 038413 1 GELDEHEKIVSILK-------E-VDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g-~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v~ 49 (191)
+|++|.+++.++++ | .|+++++++... ..+ .+.++..+++.+ .-++|.
T Consensus 62 ~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~ 140 (258)
T d1ae1a_ 62 CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIF 140 (258)
T ss_dssp CCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEE
T ss_pred eecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-cccccc
Confidence 58899888776642 3 789999888643 111 334455555665 556653
Q ss_pred -CC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCC-CCCceEEEecCCc
Q 038413 50 -SE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPF-EPHDDVVVYGNGE 119 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~-~~~~~~~~~~~g~ 119 (191)
|+ .+.. .. .....|..+|..++.+.+. .|+....+.||++...+........ ...+.....-...
T Consensus 141 isS~~~~~-~~----~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~ 215 (258)
T d1ae1a_ 141 LSSIAGFS-AL----PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT 215 (258)
T ss_dssp ECCGGGTS-CC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS
T ss_pred cccccccc-cc----ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcC
Confidence 33 3321 11 1133566788888776553 5788888999987764433221100 0000000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
...-+...+|||.+++.++.+.. . -|+.+.+.|
T Consensus 216 plgR~~~pediA~~v~fL~S~~s~~itG~~i~vDG 250 (258)
T d1ae1a_ 216 PMGRAGKPQEVSALIAFLCFPAASYITGQIIWADG 250 (258)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCC
Confidence 00125689999999999886543 2 367788874
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=96.86 E-value=0.0018 Score=46.28 Aligned_cols=149 Identities=7% Similarity=0.003 Sum_probs=80.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~vkr~v-~ 49 (191)
+|++|++++.++++ +.|+++++++... +.+ .+.++..+.+.+.-.+++ .
T Consensus 66 ~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~ 145 (260)
T d1h5qa_ 66 CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVT 145 (260)
T ss_dssp CCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEe
Confidence 58999998877763 5899999987542 112 234455554443123333 2
Q ss_pred CCcccCCCCC---CCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 50 SEFGCEEDRV---RPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 50 s~~g~~~~~~---~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
++........ ........|..+|..++.+.+ ..|+....+.||++.......... +.........
T Consensus 146 ~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~-----~~~~~~~~~~ 220 (260)
T d1h5qa_ 146 SSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK-----KIRDHQASNI 220 (260)
T ss_dssp CCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH-----HHHHHHHHTC
T ss_pred eccccccccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCH-----HHHHHHHhcC
Confidence 3221111110 000123456778888876654 258888999999876543222110 0000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCC
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTN 155 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~ 155 (191)
-..-+...+|||.+++-++.+.. . -|+.+.+.| +.
T Consensus 221 pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG-G~ 257 (260)
T d1h5qa_ 221 PLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDG-GQ 257 (260)
T ss_dssp TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECT-TG
T ss_pred CCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECC-Ce
Confidence 00124578999999988887543 2 278888885 54
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.84 E-value=0.006 Score=44.15 Aligned_cols=136 Identities=15% Similarity=0.200 Sum_probs=75.0
Q ss_pred CCCCCHHHHHHhhc-----cCcEEEEccCCCC-------------------cc----cHHHHHHHHHHcCCccEEE-c-C
Q 038413 1 GELDEHEKIVSILK-----EVDVVISTVAYPQ-------------------FL----DQLKIVHAIKVAGNIKRFL-P-S 50 (191)
Q Consensus 1 gD~~d~~~l~~a~~-----g~d~V~~~~~~~~-------------------~~----~~~~li~aa~~~g~vkr~v-~-s 50 (191)
+|++|.+++.++++ ..|+++++++... +. ..+.++..+++.+ --++| . |
T Consensus 64 ~Dv~~~~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS 142 (285)
T d1jtva_ 64 LDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGS 142 (285)
T ss_dssp CCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEE
T ss_pred ccccchHhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEec
Confidence 58999998887763 4799999987642 11 2344556666665 44555 2 3
Q ss_pred CcccCCCCCCCCCCchhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCC-CC---CCc--eEEEec-
Q 038413 51 EFGCEEDRVRPLPPFEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRP-FE---PHD--DVVVYG- 116 (191)
Q Consensus 51 ~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~-~~---~~~--~~~~~~- 116 (191)
..|... . .....|..+|..++.+.+ ..|+..+.+.||++...+....... .. ... ...-..
T Consensus 143 ~~g~~~-~----~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (285)
T d1jtva_ 143 VGGLMG-L----PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQ 217 (285)
T ss_dssp GGGTSC-C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHH
T ss_pred hhhcCC-C----CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHH
Confidence 333321 1 113457788988887654 2589999999998765433222110 00 000 000000
Q ss_pred ----CCc-ceeeecchhhHHHHHHHHhcCcc
Q 038413 117 ----NGE-AKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 117 ----~g~-~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
... ........+|||++++.++..+.
T Consensus 218 ~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~ 248 (285)
T d1jtva_ 218 YLAHSKQVFREAAQNPEEVAEVFLTALRAPK 248 (285)
T ss_dssp HHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred HHHHHhhhhcccCCCHHHHHHHHHHHHhCCC
Confidence 000 00124468999999999998764
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.73 E-value=0.0035 Score=44.58 Aligned_cols=132 Identities=8% Similarity=0.022 Sum_probs=71.6
Q ss_pred ccCcEEEEccCCCC--------------------cc----cHHHHHHHHHHcCCccEEE-cCCcccCCCCCCCCCC-chh
Q 038413 14 KEVDVVISTVAYPQ--------------------FL----DQLKIVHAIKVAGNIKRFL-PSEFGCEEDRVRPLPP-FEA 67 (191)
Q Consensus 14 ~g~d~V~~~~~~~~--------------------~~----~~~~li~aa~~~g~vkr~v-~s~~g~~~~~~~~~~~-~~~ 67 (191)
.+.|+++++++... .. ..+.++..+++.+ --++| .|+...... .| ...
T Consensus 70 G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~-----~~~~~~ 143 (252)
T d1zmta1 70 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGP-----WKELST 143 (252)
T ss_dssp SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSC-----CTTCHH
T ss_pred CCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccc-----cccccc
Confidence 36899999887431 01 1244555555554 34555 343221111 12 345
Q ss_pred hHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCC---CCCCceEEEecCCcce-eeecchhhHHHHHHH
Q 038413 68 YLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRP---FEPHDDVVVYGNGEAK-AVFNYEEDIAKCTIK 136 (191)
Q Consensus 68 ~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~-~~~i~~~Dva~~~~~ 136 (191)
|..+|..++.+.+. .|+....+.||++.....+.+... ....+....... ..+ .-+...+|||.+++.
T Consensus 144 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~-~~pl~R~g~pedvA~~v~f 222 (252)
T d1zmta1 144 YTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK-VTALQRLGTQKELGELVAF 222 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH-HSSSSSCBCHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHh-cCCCCCCcCHHHHHHHHHH
Confidence 77889888766542 589999999998765432221100 000000000000 000 114578999999999
Q ss_pred HhcCcc-c-CCceeEeec
Q 038413 137 VINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 137 ~l~~~~-~-~~~~~~i~~ 152 (191)
++.+.. . -|+.+.+.|
T Consensus 223 L~S~~s~~iTG~~i~vdG 240 (252)
T d1zmta1 223 LASGSCDYLTGQVFWLAG 240 (252)
T ss_dssp HHTTSCGGGTTCEEEEST
T ss_pred HhCchhcCCcCCeEEECC
Confidence 887653 2 378888875
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=96.60 E-value=0.00089 Score=47.48 Aligned_cols=143 Identities=6% Similarity=-0.014 Sum_probs=78.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------cccHHHHHHHHHHcC-CccEE-EcCCc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLDQLKIVHAIKVAG-NIKRF-LPSEF 52 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~~~~li~aa~~~g-~vkr~-v~s~~ 52 (191)
+|++|++++.++++ +.|+++++++... ..+...+.+++...- .-+.+ +.|+.
T Consensus 58 ~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~ 137 (241)
T d2a4ka1 58 ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV 137 (241)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred ecCCCHHHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc
Confidence 58999988877653 5899999987542 112233444433221 01122 23332
Q ss_pred ccCCCCCCCCCC-chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeee
Q 038413 53 GCEEDRVRPLPP-FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVF 124 (191)
Q Consensus 53 g~~~~~~~~~~~-~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (191)
+... .| ...|..+|..++.+.+. .|+....+.||++..+...... .+.........-..-+
T Consensus 138 a~~~------~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~-----~~~~~~~~~~~p~~r~ 206 (241)
T d2a4ka1 138 AGLG------AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP-----PWAWEQEVGASPLGRA 206 (241)
T ss_dssp TTCC------HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC-----HHHHHHHHHTSTTCSC
T ss_pred cccc------ccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhh-----HhHHHHHHhCCCCCCC
Confidence 2111 12 23455678877766543 5789999999987654332211 0000000000000124
Q ss_pred cchhhHHHHHHHHhcCcc-cC-CceeEeecCCC
Q 038413 125 NYEEDIAKCTIKVINDPR-TC-NRIVIYRPQTN 155 (191)
Q Consensus 125 i~~~Dva~~~~~~l~~~~-~~-~~~~~i~~~~~ 155 (191)
...+|||+++..++.+.. .. |+.+.+.| +.
T Consensus 207 ~~p~dva~~v~fL~S~~s~~itG~~i~vDG-G~ 238 (241)
T d2a4ka1 207 GRPEEVAQAALFLLSEESAYITGQALYVDG-GR 238 (241)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TT
T ss_pred cCHHHHHHHHHHHhcchhCCCcCceEEeCC-Cc
Confidence 578999999999887543 33 67888875 44
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=96.55 E-value=0.0034 Score=44.88 Aligned_cols=146 Identities=11% Similarity=0.123 Sum_probs=79.7
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC--------------------ccc----HHHHHHHHHHcCCccEEE-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ--------------------FLD----QLKIVHAIKVAGNIKRFL- 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~--------------------~~~----~~~li~aa~~~g~vkr~v- 48 (191)
+|++|.+++.++++ +.|+++++++... +.+ .+.++..+++.+ --++|
T Consensus 61 ~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~ 139 (260)
T d1zema1 61 CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVN 139 (260)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCe
Confidence 58999888776653 5899999988542 111 344455555544 33555
Q ss_pred cCC-cccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEeccccccccccccc-------CCC--CCC-c
Q 038413 49 PSE-FGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLL-------RPF--EPH-D 110 (191)
Q Consensus 49 ~s~-~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~-------~~~--~~~-~ 110 (191)
.|| .+... . .....|..+|..++.+.+. .|+....+.||++......... ... ... +
T Consensus 140 isS~~~~~~-~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 214 (260)
T d1zema1 140 TASMAGVKG-P----PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPK 214 (260)
T ss_dssp ECCHHHHSC-C----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHH
T ss_pred eechhhccC-C----cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHH
Confidence 343 33211 0 1134577889888876553 5788899999987654321100 000 000 0
Q ss_pred e-EEEecCCcceeeecchhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 111 D-VVVYGNGEAKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 111 ~-~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
. ....-...-..-+...+|||.+++.++.+.. . -|+.+.+.|
T Consensus 215 ~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG 259 (260)
T d1zema1 215 VVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG 259 (260)
T ss_dssp HHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence 0 0000000000124568999999998887543 2 267777763
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.42 E-value=0.0079 Score=43.13 Aligned_cols=149 Identities=12% Similarity=0.089 Sum_probs=81.3
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------ccc----HHHHHHHHHHcCCccE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLD----QLKIVHAIKVAGNIKR 46 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~----~~~li~aa~~~g~vkr 46 (191)
+|++|++++.++++ +.|+++++++... +.+ .+.++..+++.+ =..
T Consensus 64 ~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~i 142 (272)
T d1xkqa_ 64 ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEI 142 (272)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-Ccc
Confidence 58999888877653 5899999987532 111 233444444443 234
Q ss_pred EEc-CCcccCCCCCCCCCC-chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCC-CCc---eEE
Q 038413 47 FLP-SEFGCEEDRVRPLPP-FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFE-PHD---DVV 113 (191)
Q Consensus 47 ~v~-s~~g~~~~~~~~~~~-~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~-~~~---~~~ 113 (191)
++. |+.+.... .| ...|..+|..+..+.+. .|+....+.||++...+......... ... ...
T Consensus 143 I~~~Ss~a~~~~-----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~ 217 (272)
T d1xkqa_ 143 VNVSSIVAGPQA-----QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMA 217 (272)
T ss_dssp EEECCGGGSSSC-----CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred ccccchhccccC-----CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHH
Confidence 443 43321111 12 33466789888766542 58999999999876543222111000 000 000
Q ss_pred EecCCcce-eeecchhhHHHHHHHHhcCc--ccC-CceeEeecCCCcc
Q 038413 114 VYGNGEAK-AVFNYEEDIAKCTIKVINDP--RTC-NRIVIYRPQTNII 157 (191)
Q Consensus 114 ~~~~g~~~-~~~i~~~Dva~~~~~~l~~~--~~~-~~~~~i~~~~~~~ 157 (191)
.. ....+ .-+...+|||++++.++.++ .+. |+.+.+.| +-.+
T Consensus 218 ~~-~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDG-G~~l 263 (272)
T d1xkqa_ 218 SH-KECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADG-GTSL 263 (272)
T ss_dssp HC-TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST-TGGG
T ss_pred HH-hcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCc-CHHH
Confidence 00 00001 12457899999999888643 233 78888885 5443
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=96.36 E-value=0.0096 Score=43.01 Aligned_cols=150 Identities=11% Similarity=0.021 Sum_probs=77.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCCc-------------------ccH----HHHHHHHHHcCCccEEE-c
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQF-------------------LDQ----LKIVHAIKVAGNIKRFL-P 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~~-------------------~~~----~~li~aa~~~g~vkr~v-~ 49 (191)
+|+.|.+++.+++. +.|+++++++.... ... ...+..+...+.-..++ .
T Consensus 82 ~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ 161 (294)
T d1w6ua_ 82 CDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSI 161 (294)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccccccccccccccc
Confidence 58888888776542 68999999986430 011 11122222222022333 2
Q ss_pred CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCccee
Q 038413 50 SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKA 122 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 122 (191)
++....... .....|..+|..++.+.+. .|+....+.||++........... ............-..
T Consensus 162 ss~~~~~~~----~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~pl~ 235 (294)
T d1w6ua_ 162 TTIYAETGS----GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP--TGTFEKEMIGRIPCG 235 (294)
T ss_dssp CCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT--TSHHHHHHHTTCTTS
T ss_pred ccchhhhcc----cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCC--cHHHHHHHhhcCCCC
Confidence 322111110 1133577889888877653 578889999998765432222110 000000000000001
Q ss_pred eecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCcc
Q 038413 123 VFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 123 ~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
-+...+|||.++..++.+.. . -|+.+.+.| +..+
T Consensus 236 R~~~pediA~~v~fL~sd~s~~itG~~i~vDG-G~~l 271 (294)
T d1w6ua_ 236 RLGTVEELANLAAFLCSDYASWINGAVIKFDG-GEEV 271 (294)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST-THHH
T ss_pred CCCCHHHHHHHHHHHhCchhcCCCCcEEEECC-Chhh
Confidence 24578999999999887643 2 378888885 5443
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.35 E-value=0.0079 Score=42.48 Aligned_cols=120 Identities=13% Similarity=0.113 Sum_probs=72.6
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEEc-
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFLP- 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v~- 49 (191)
+|++|.+++.++++ +.|+++++++... + ..++.++..+++.+ --++|.
T Consensus 63 ~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~i 141 (244)
T d1yb1a_ 63 VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTV 141 (244)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred eeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEe
Confidence 58999988877653 5899999998653 1 12355666677776 556663
Q ss_pred CCcccCCCCCCCCCCc-hhhHHHHHHHHHHHHh----------cCCCeEEEecccccccccccccCCCCCCceEEEecCC
Q 038413 50 SEFGCEEDRVRPLPPF-EAYLEKKRIVRRAIEA----------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNG 118 (191)
Q Consensus 50 s~~g~~~~~~~~~~~~-~~~~~~k~~~e~~l~~----------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (191)
|+...... .|. ..|..+|.++..+.+. .|+..+.+.||+........ . .
T Consensus 142 sS~~~~~~-----~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~--------~-------~ 201 (244)
T d1yb1a_ 142 ASAAGHVS-----VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--------P-------S 201 (244)
T ss_dssp CCCC-CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--------T-------H
T ss_pred ecchhcCC-----CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC--------c-------C
Confidence 33221111 122 3466788887766442 36888999999754432111 0 0
Q ss_pred cceeeecchhhHHHHHHHHhcCc
Q 038413 119 EAKAVFNYEEDIAKCTIKVINDP 141 (191)
Q Consensus 119 ~~~~~~i~~~Dva~~~~~~l~~~ 141 (191)
.........+|+|+.++..+..+
T Consensus 202 ~~~~~~~~pe~va~~i~~~~~~~ 224 (244)
T d1yb1a_ 202 TSLGPTLEPEEVVNRLMHGILTE 224 (244)
T ss_dssp HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred ccccCCCCHHHHHHHHHHHHhcC
Confidence 01123456889999988877664
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.32 E-value=0.0097 Score=42.29 Aligned_cols=133 Identities=19% Similarity=0.177 Sum_probs=71.9
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-------------------ccc----HHHHHHHHHHcCC-ccEEEc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-------------------FLD----QLKIVHAIKVAGN-IKRFLP 49 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-------------------~~~----~~~li~aa~~~g~-vkr~v~ 49 (191)
+|++|++++.++++ +.|++||+++... +.+ .+.++..+++.+. -.++|.
T Consensus 68 ~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~ 147 (257)
T d1xg5a_ 68 CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIIN 147 (257)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEE
Confidence 58999888776653 6899999998642 112 2344555555431 135542
Q ss_pred -CC-cccCCCCCCCCCC-chhhHHHHHHHHHHHH---------hcCCCeEEEecccccccccccccCCCCCCceEEEecC
Q 038413 50 -SE-FGCEEDRVRPLPP-FEAYLEKKRIVRRAIE---------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGN 117 (191)
Q Consensus 50 -s~-~g~~~~~~~~~~~-~~~~~~~k~~~e~~l~---------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (191)
|+ .+... . +.+ ...|..+|..+....+ ..++....+.||..-............+ . ...
T Consensus 148 isS~~~~~~-~---p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~--~---~~~ 218 (257)
T d1xg5a_ 148 INSMSGHRV-L---PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPE--K---AAA 218 (257)
T ss_dssp ECCGGGTSC-C---SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHH--H---HHH
T ss_pred EechHhcCC-C---CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHH--H---HHh
Confidence 33 23211 0 012 2346678887775543 2467788899987655432222110000 0 000
Q ss_pred CcceeeecchhhHHHHHHHHhcCcc
Q 038413 118 GEAKAVFNYEEDIAKCTIKVINDPR 142 (191)
Q Consensus 118 g~~~~~~i~~~Dva~~~~~~l~~~~ 142 (191)
......+...+|||+++..++.++.
T Consensus 219 ~~~~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 219 TYEQMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp HHC---CBCHHHHHHHHHHHHHSCT
T ss_pred cCCCCCCcCHHHHHHHHHHHhCChh
Confidence 0011235789999999999988764
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.30 E-value=0.0063 Score=43.01 Aligned_cols=146 Identities=12% Similarity=0.086 Sum_probs=79.4
Q ss_pred CCCCHHHHHHhh---ccCcEEEEccCCCC-------------------c----ccHHHHHHHHHHcCCccEEE-cC-Ccc
Q 038413 2 ELDEHEKIVSIL---KEVDVVISTVAYPQ-------------------F----LDQLKIVHAIKVAGNIKRFL-PS-EFG 53 (191)
Q Consensus 2 D~~d~~~l~~a~---~g~d~V~~~~~~~~-------------------~----~~~~~li~aa~~~g~vkr~v-~s-~~g 53 (191)
|+.+.+..++.. .+.|+++|+++... + ...+.++..+++.+ --+++ .+ ..+
T Consensus 58 d~~~~~~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~ 136 (245)
T d2ag5a1 58 DVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVAS 136 (245)
T ss_dssp CTTCHHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBT
T ss_pred eccccccccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-Cceeeeeechhh
Confidence 566666555554 47899999998653 1 11344455455554 33444 33 333
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCC-ceEEEecCCcceeeec
Q 038413 54 CEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPH-DDVVVYGNGEAKAVFN 125 (191)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~i 125 (191)
.... ......|..+|..++.+.+. .|+....+.||++............... .............-+.
T Consensus 137 ~~~~----~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~ 212 (245)
T d2ag5a1 137 SVKG----VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFA 212 (245)
T ss_dssp TTBC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCE
T ss_pred ccCC----ccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCc
Confidence 2111 12244677899988877653 5888999999987654322111000000 0000000000001245
Q ss_pred chhhHHHHHHHHhcCcc-c-CCceeEeec
Q 038413 126 YEEDIAKCTIKVINDPR-T-CNRIVIYRP 152 (191)
Q Consensus 126 ~~~Dva~~~~~~l~~~~-~-~~~~~~i~~ 152 (191)
..+|||+++.-++.+.. . -|+.+.+.|
T Consensus 213 ~pedva~~v~fL~s~~s~~iTG~~i~VDG 241 (245)
T d2ag5a1 213 TAEEIAMLCVYLASDESAYVTGNPVIIDG 241 (245)
T ss_dssp EHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred CHHHHHHHHHHHhChhhCCCcCceEEeCC
Confidence 68999999999887643 2 378888875
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.16 E-value=0.0081 Score=42.57 Aligned_cols=146 Identities=6% Similarity=0.025 Sum_probs=74.8
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC-----------------------cccHHHHHHHHHHcCCc--cEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ-----------------------FLDQLKIVHAIKVAGNI--KRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~-----------------------~~~~~~li~aa~~~g~v--kr~v 48 (191)
+|+.|.+++.++++ +.|+++|+++... ..+...+.+++...- . .++|
T Consensus 65 ~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~-~~~G~Iv 143 (256)
T d1ulua_ 65 ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLL-REGGGIV 143 (256)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE-EEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHh-ccCCEEE
Confidence 48888888776653 5899999987532 011223333332210 0 1233
Q ss_pred -c-CCcccCCCCCCCCCCchhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc
Q 038413 49 -P-SEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE 119 (191)
Q Consensus 49 -~-s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (191)
. |..+.. .. .....|..+|..++.+.+. .|+....+.||++........... .+.........
T Consensus 144 ~isS~~~~~-~~----~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~---~~~~~~~~~~~ 215 (256)
T d1ulua_ 144 TLTYYASEK-VV----PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF---TKMYDRVAQTA 215 (256)
T ss_dssp EEECGGGTS-BC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------C---HHHHHHHHHHS
T ss_pred EEeehHhcC-CC----CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhh---HHHHHHHHhcC
Confidence 2 332221 11 1234567789888877553 588999999998765322111100 00000000000
Q ss_pred ceeeecchhhHHHHHHHHhcCcc-c-CCceeEeecCCCc
Q 038413 120 AKAVFNYEEDIAKCTIKVINDPR-T-CNRIVIYRPQTNI 156 (191)
Q Consensus 120 ~~~~~i~~~Dva~~~~~~l~~~~-~-~~~~~~i~~~~~~ 156 (191)
-..-+...+|||++++.++.+.. . -|+.+.+.| +..
T Consensus 216 pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDG-G~~ 253 (256)
T d1ulua_ 216 PLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDA-GYH 253 (256)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGG
T ss_pred CCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECc-CEe
Confidence 00124578999999998887643 2 367888875 543
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.14 E-value=0.15 Score=36.22 Aligned_cols=149 Identities=11% Similarity=0.097 Sum_probs=82.2
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC---------------------c----ccHHHHHHHHHHcCCccEEE
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ---------------------F----LDQLKIVHAIKVAGNIKRFL 48 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~---------------------~----~~~~~li~aa~~~g~vkr~v 48 (191)
+|++|++++.++++ ..|+++++++... + ...+.++..+++.+ -.+++
T Consensus 63 ~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii 141 (274)
T d1xhla_ 63 ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVN 141 (274)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEE
T ss_pred eeCCCHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-ccccc
Confidence 58999888877653 5799999987531 1 11344555555555 34555
Q ss_pred c-CCcccCCCCCCCCCC-chhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceE-EEec--
Q 038413 49 P-SEFGCEEDRVRPLPP-FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDV-VVYG-- 116 (191)
Q Consensus 49 ~-s~~g~~~~~~~~~~~-~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~-~~~~-- 116 (191)
. |+...... .| ...|..+|..++.+.+. .|+....+.||++..+............... ....
T Consensus 142 ~~ss~~~~~~-----~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~ 216 (274)
T d1xhla_ 142 VSSIVAGPQA-----HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSR 216 (274)
T ss_dssp ECCGGGSSSC-----CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred chhhhhcccc-----CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHH
Confidence 3 33221111 12 33466789888776542 5899999999988654322211000000000 0000
Q ss_pred CCcce-eeecchhhHHHHHHHHhcCc--cc-CCceeEeecCCCc
Q 038413 117 NGEAK-AVFNYEEDIAKCTIKVINDP--RT-CNRIVIYRPQTNI 156 (191)
Q Consensus 117 ~g~~~-~~~i~~~Dva~~~~~~l~~~--~~-~~~~~~i~~~~~~ 156 (191)
....+ .-+...+|||++++-++..+ .. -|+.+.+.| +..
T Consensus 217 ~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDG-G~~ 259 (274)
T d1xhla_ 217 KECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADG-GST 259 (274)
T ss_dssp TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST-TGG
T ss_pred HcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCc-CHH
Confidence 00001 12456899999999888632 23 378888885 543
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=95.02 E-value=0.042 Score=38.75 Aligned_cols=128 Identities=13% Similarity=0.019 Sum_probs=70.4
Q ss_pred cCcEEEEccCCCC-----------ccc----HHHHHHHHHHc--CCccEEE-c-CCcccCCCCCCCCCCchhhHHHHHHH
Q 038413 15 EVDVVISTVAYPQ-----------FLD----QLKIVHAIKVA--GNIKRFL-P-SEFGCEEDRVRPLPPFEAYLEKKRIV 75 (191)
Q Consensus 15 g~d~V~~~~~~~~-----------~~~----~~~li~aa~~~--g~vkr~v-~-s~~g~~~~~~~~~~~~~~~~~~k~~~ 75 (191)
+.|+++++++... +.+ ++.++..+++. +.-.++| . |..+... . .....|..+|..+
T Consensus 84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~-~----~~~~~Y~asKaal 158 (254)
T d1sbya1 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-I----HQVPVYSASKAAV 158 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-C----TTSHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC-C----CCCHHHHHHHHHH
Confidence 6899999999753 222 34445555443 1123454 2 3333221 1 1234577888887
Q ss_pred HHHHH-------hcCCCeEEEecccccccccccccCC-CCCCceEEEecCCcceeeecchhhHHHHHHHHhcCcccCCce
Q 038413 76 RRAIE-------AVEIPYTFVSANCYGAYFVNVLLRP-FEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVINDPRTCNRI 147 (191)
Q Consensus 76 e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~ 147 (191)
....+ ..|+....+.||++..+....+... .........+ ..+.....+++|++++.++.... -|+.
T Consensus 159 ~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~va~~~~~~~~~~~-tG~v 233 (254)
T d1sbya1 159 VSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL----LSHPTQTSEQCGQNFVKAIEANK-NGAI 233 (254)
T ss_dssp HHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH----TTSCCEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred HHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc----ccCCCCCHHHHHHHHHHhhhCCC-CCCE
Confidence 76654 3588899999998876543322110 0011000000 11233468899999888876543 4677
Q ss_pred eEeec
Q 038413 148 VIYRP 152 (191)
Q Consensus 148 ~~i~~ 152 (191)
+.+.|
T Consensus 234 i~vdg 238 (254)
T d1sbya1 234 WKLDL 238 (254)
T ss_dssp EEEET
T ss_pred EEECC
Confidence 77774
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.59 E-value=0.024 Score=40.08 Aligned_cols=85 Identities=5% Similarity=-0.093 Sum_probs=44.9
Q ss_pred hhhHHHHHHHHHHHHh-----cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHhcC
Q 038413 66 EAYLEKKRIVRRAIEA-----VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVIND 140 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~-----~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~ 140 (191)
..|..+|..++.+.+. .|+....+.||++...+.........................+...+|+|++++.++.+
T Consensus 167 ~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~ 246 (259)
T d1oaaa_ 167 GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhh
Confidence 4566789888766543 57888889999887653222110000000000000000001245789999999998865
Q ss_pred cccC-CceeEe
Q 038413 141 PRTC-NRIVIY 150 (191)
Q Consensus 141 ~~~~-~~~~~i 150 (191)
.... |+.+++
T Consensus 247 ~s~~TG~~idv 257 (259)
T d1oaaa_ 247 DTFQSGAHVDF 257 (259)
T ss_dssp CCSCTTEEEET
T ss_pred ccCCCCCeEEe
Confidence 4322 454443
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=93.45 E-value=0.12 Score=36.32 Aligned_cols=86 Identities=7% Similarity=-0.080 Sum_probs=49.7
Q ss_pred hhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHHh
Q 038413 66 EAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 138 (191)
..|..+|..++.+.+. .|+....+.||++........... ..............-+...+|||.++.-++
T Consensus 155 ~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~pedIA~~v~fL~ 231 (274)
T d2pd4a1 155 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF---RMILKWNEINAPLRKNVSLEEVGNAGMYLL 231 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH---HHHHHHHHHHSTTSSCCCHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch---HHHHHHHhhhhhccCCcCHHHHHHHHHHHh
Confidence 3566788888776553 588999999998765432221100 000000000000123467999999999988
Q ss_pred cCcc-c-CCceeEeecCCC
Q 038413 139 NDPR-T-CNRIVIYRPQTN 155 (191)
Q Consensus 139 ~~~~-~-~~~~~~i~~~~~ 155 (191)
.+.. . -++.+.+.| +.
T Consensus 232 S~~s~~itG~~i~vDG-G~ 249 (274)
T d2pd4a1 232 SSLSSGVSGEVHFVDA-GY 249 (274)
T ss_dssp SGGGTTCCSCEEEEST-TG
T ss_pred ChhhCCCcCceEEECC-Ch
Confidence 7643 2 367888875 44
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=93.41 E-value=0.45 Score=32.89 Aligned_cols=32 Identities=16% Similarity=0.069 Sum_probs=23.3
Q ss_pred hhhHHHHHHHHHHHH-------hcCCCeEEEeccccccc
Q 038413 66 EAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAY 97 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~ 97 (191)
..|..+|..+..+.+ ..|+....+.||++...
T Consensus 168 ~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 168 YAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 357788887776643 35899999999986654
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=93.30 E-value=0.11 Score=36.35 Aligned_cols=86 Identities=9% Similarity=-0.106 Sum_probs=50.8
Q ss_pred hhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCC-CCceEEEecCCcceeeecchhhHHHHHHHH
Q 038413 66 EAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFE-PHDDVVVYGNGEAKAVFNYEEDIAKCTIKV 137 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 137 (191)
..|..+|..++.+.+. +|+....++||++............. ........ .- .-+...+|||.++.-+
T Consensus 156 ~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~--pl--~R~~~peeia~~v~fL 231 (258)
T d1qsga_ 156 NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT--PI--RRTVTIEDVGNSAAFL 231 (258)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHS--TT--SSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCC--CC--CCCcCHHHHHHHHHHH
Confidence 4577889888877653 57889999999987543322111000 00000000 00 1256789999999988
Q ss_pred hcCcc-cC-CceeEeecCCCc
Q 038413 138 INDPR-TC-NRIVIYRPQTNI 156 (191)
Q Consensus 138 l~~~~-~~-~~~~~i~~~~~~ 156 (191)
+.+.. .. ++.+.+.| +..
T Consensus 232 ~s~~s~~itG~~i~vDG-G~~ 251 (258)
T d1qsga_ 232 CSDLSAGISGEVVHVDG-GFS 251 (258)
T ss_dssp TSGGGTTCCSCEEEEST-TGG
T ss_pred hCchhcCccCceEEECc-CHH
Confidence 87643 33 67788875 544
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=93.01 E-value=0.32 Score=34.17 Aligned_cols=85 Identities=8% Similarity=-0.012 Sum_probs=49.0
Q ss_pred chhhHHHHHHHHHHHHh-------cCCCeEEEeccccccc--ccccccCCCCCCceEEEecCCcceeeecchhhHHHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAY--FVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTI 135 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~ 135 (191)
...|..+|..++.+.+. .|+....+.||+.... ..+..... .... .+.. .-+...+|||++++
T Consensus 187 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~~~~-~~~~---~pl~----~R~~~peeiA~~v~ 258 (284)
T d1e7wa_ 187 YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEG-HRSK---VPLY----QRDSSAAEVSDVVI 258 (284)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHHH-HHTT---CTTT----TSCBCHHHHHHHHH
T ss_pred eeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHHHHHH-HHhc---CCCC----CCCCCHHHHHHHHH
Confidence 34677889888877653 5788888999963211 10000000 0000 0000 12456899999999
Q ss_pred HHhcCcc-c-CCceeEeecCCCccC
Q 038413 136 KVINDPR-T-CNRIVIYRPQTNIIS 158 (191)
Q Consensus 136 ~~l~~~~-~-~~~~~~i~~~~~~~t 158 (191)
.++.+.. + -|+.+.+.| +..+|
T Consensus 259 fL~S~~s~~itG~~i~VDG-G~sl~ 282 (284)
T d1e7wa_ 259 FLCSSKAKYITGTCVKVDG-GYSLT 282 (284)
T ss_dssp HHHSGGGTTCCSCEEEEST-TGGGC
T ss_pred HHhCchhcCccCCeEEECc-Chhcc
Confidence 8887543 2 378888885 66554
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=93.00 E-value=0.15 Score=35.72 Aligned_cols=88 Identities=8% Similarity=0.007 Sum_probs=50.1
Q ss_pred hhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCc---eEEEecC-----CcceeeecchhhHH
Q 038413 67 AYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHD---DVVVYGN-----GEAKAVFNYEEDIA 131 (191)
Q Consensus 67 ~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~---~~~~~~~-----g~~~~~~i~~~Dva 131 (191)
.|..+|..++.+.+. .|+....+.||++................ ....... ....+.+...+|||
T Consensus 159 ~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva 238 (268)
T d2h7ma1 159 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVA 238 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHH
T ss_pred hhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 466788888777653 57889999999887643322211100000 0000000 00113366799999
Q ss_pred HHHHHHhcCcc-cC-CceeEeecCCC
Q 038413 132 KCTIKVINDPR-TC-NRIVIYRPQTN 155 (191)
Q Consensus 132 ~~~~~~l~~~~-~~-~~~~~i~~~~~ 155 (191)
+++..++.+.. +. ++.+.+.| +.
T Consensus 239 ~~v~fL~Sd~a~~iTG~~i~vDG-G~ 263 (268)
T d2h7ma1 239 KTVCALLSDWLPATTGDIIYADG-GA 263 (268)
T ss_dssp HHHHHHHSSSCTTCCSEEEEEST-TG
T ss_pred HHHHHHhCchhcCccCCEEEECc-Cc
Confidence 99999886532 33 67788875 44
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=92.79 E-value=0.13 Score=36.65 Aligned_cols=82 Identities=9% Similarity=0.004 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHHH--------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcce-eeecchhhHHHHHHHH
Q 038413 67 AYLEKKRIVRRAIE--------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK-AVFNYEEDIAKCTIKV 137 (191)
Q Consensus 67 ~~~~~k~~~e~~l~--------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~~~Dva~~~~~~ 137 (191)
.|..+|..+....+ ..|+....+.||++........... .+....... ..+ .-+...+|||.+++.+
T Consensus 191 ~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~---~~~~~~~~~-~~PlgR~~~peevA~~v~fL 266 (297)
T d1d7oa_ 191 GMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI---DTMIEYSYN-NAPIQKTLTADEVGNAAAFL 266 (297)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH---HHHHHHHHH-HSSSCCCBCHHHHHHHHHHH
T ss_pred ceecccccccccccccchhccccceEEecccccccccchhhhhccCC---HHHHHHHHh-CCCCCCCCCHHHHHHHHHHH
Confidence 46667766655543 2589999999998866432221100 000000000 000 1246799999999998
Q ss_pred hcCcc-c-CCceeEeec
Q 038413 138 INDPR-T-CNRIVIYRP 152 (191)
Q Consensus 138 l~~~~-~-~~~~~~i~~ 152 (191)
+.+.. + -|+.+.+.|
T Consensus 267 ~S~~a~~itGq~i~vDG 283 (297)
T d1d7oa_ 267 VSPLASAITGATIYVDN 283 (297)
T ss_dssp TSGGGTTCCSCEEEEST
T ss_pred hCchhcCCcCceEEECc
Confidence 87643 3 368888875
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=92.70 E-value=0.6 Score=32.88 Aligned_cols=145 Identities=8% Similarity=-0.010 Sum_probs=77.4
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCCC------------------------c----ccHHHHHHHHHHcCCcc
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYPQ------------------------F----LDQLKIVHAIKVAGNIK 45 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~~------------------------~----~~~~~li~aa~~~g~vk 45 (191)
+|+.|.+++.++++ ..|+++++++... + ...+.++..+++.+ =+
T Consensus 58 ~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~ 136 (276)
T d1bdba_ 58 GDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GN 136 (276)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred cccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CC
Confidence 58889888777653 6899999998531 0 11344455565544 23
Q ss_pred EEE-cCCcccCCCCCCCCCCchhhHHHHHHHHHHHHh------cCCCeEEEecccccccccccccCCCCCCceEEEec--
Q 038413 46 RFL-PSEFGCEEDRVRPLPPFEAYLEKKRIVRRAIEA------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYG-- 116 (191)
Q Consensus 46 r~v-~s~~g~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~-- 116 (191)
.++ .|..+... . .....|..+|..++.+.+. .++....+.||++..+........ ...+...-..
T Consensus 137 iI~i~S~~~~~~-~----~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~~~ 210 (276)
T d1bdba_ 137 VIFTISNAGFYP-N----GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLG-MGSKAISTVPLA 210 (276)
T ss_dssp EEEECCGGGTST-T----SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC----------CHH
T ss_pred ceeeeechhccC-C----CCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchh-hhhhccCcHHHH
Confidence 333 34433221 1 1134577889888776553 247778899998765432211100 0000000000
Q ss_pred ---CCccee-eecchhhHHHHHHHHhcCc--cc-CCceeEeec
Q 038413 117 ---NGEAKA-VFNYEEDIAKCTIKVINDP--RT-CNRIVIYRP 152 (191)
Q Consensus 117 ---~g~~~~-~~i~~~Dva~~~~~~l~~~--~~-~~~~~~i~~ 152 (191)
....+. -+...+|+|.+++.++..+ .. -|+.+.+.|
T Consensus 211 ~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDG 253 (276)
T d1bdba_ 211 DMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDG 253 (276)
T ss_dssp HHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESS
T ss_pred HHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECc
Confidence 000111 1446899999988877532 22 378888875
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=92.41 E-value=1.1 Score=30.85 Aligned_cols=65 Identities=12% Similarity=-0.019 Sum_probs=36.8
Q ss_pred chhhHHHHHHHHHHHH-------hcCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHHHH
Q 038413 65 FEAYLEKKRIVRRAIE-------AVEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTIKV 137 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~-------~~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 137 (191)
...|..+|.++..+.+ ..|+....+.||++...... +....+.++.++.++..
T Consensus 169 ~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~--------------------~~~~~~~e~~a~~~~~~ 228 (250)
T d1yo6a1 169 VLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG--------------------KNAALTVEQSTAELISS 228 (250)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC--------------------CCCCCCHHHHHHHHHHH
Confidence 4457789988776654 35889999999976543210 01224568888888888
Q ss_pred hcCcc--cCCceeE
Q 038413 138 INDPR--TCNRIVI 149 (191)
Q Consensus 138 l~~~~--~~~~~~~ 149 (191)
+..+. ..|+.|.
T Consensus 229 ~~~~~~~~sG~f~~ 242 (250)
T d1yo6a1 229 FNKLDNSHNGRFFM 242 (250)
T ss_dssp HTTCCGGGTTCEEE
T ss_pred HhcCCCCCCeEEEC
Confidence 87642 3345443
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=87.14 E-value=2.8 Score=28.37 Aligned_cols=73 Identities=10% Similarity=0.002 Sum_probs=45.2
Q ss_pred chhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTI 135 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~ 135 (191)
...|..+|..++.+.+. .|+....+.||+.......... +. ...-.++..+++|+.+.
T Consensus 139 ~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~-~~------------~~~~~~~~pe~va~~~~ 205 (236)
T d1dhra_ 139 MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM-PE------------ADFSSWTPLEFLVETFH 205 (236)
T ss_dssp BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHS-TT------------SCGGGSEEHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhC-cc------------chhhcCCCHHHHHHHHH
Confidence 34677899999888763 2577788999987664322111 10 01123456899999999
Q ss_pred HHhcCcc-c-CCceeEe
Q 038413 136 KVINDPR-T-CNRIVIY 150 (191)
Q Consensus 136 ~~l~~~~-~-~~~~~~i 150 (191)
.++.... . -|+.+.+
T Consensus 206 ~l~s~~~~~i~G~~i~v 222 (236)
T d1dhra_ 206 DWITGNKRPNSGSLIQV 222 (236)
T ss_dssp HHHTTTTCCCTTCEEEE
T ss_pred HHhCCCccCCCCCeEEE
Confidence 9887643 2 2454444
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=85.74 E-value=2.4 Score=28.68 Aligned_cols=74 Identities=7% Similarity=0.010 Sum_probs=44.3
Q ss_pred chhhHHHHHHHHHHHHh---------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcceeeecchhhHHHHHH
Q 038413 65 FEAYLEKKRIVRRAIEA---------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAKAVFNYEEDIAKCTI 135 (191)
Q Consensus 65 ~~~~~~~k~~~e~~l~~---------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~ 135 (191)
...|..+|.+++.+.+. .++....+.||+........... ......++..+|+++.++
T Consensus 139 ~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~-------------~~~~~~~~~~~~va~~~~ 205 (235)
T d1ooea_ 139 MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP-------------NADHSSWTPLSFISEHLL 205 (235)
T ss_dssp BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST-------------TCCGGGCBCHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc-------------CCccccCCCHHHHHHHHH
Confidence 34677899999888664 13455668888766543222110 011124567899999988
Q ss_pred HHhcCcc---cCCceeEee
Q 038413 136 KVINDPR---TCNRIVIYR 151 (191)
Q Consensus 136 ~~l~~~~---~~~~~~~i~ 151 (191)
..+..+. .-+..+.+.
T Consensus 206 ~~l~~~~~~~~tG~~i~v~ 224 (235)
T d1ooea_ 206 KWTTETSSRPSSGALLKIT 224 (235)
T ss_dssp HHHHCGGGCCCTTCEEEEE
T ss_pred HHhcCccccCCCceEEEEE
Confidence 7776543 225555553
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.39 E-value=1.6 Score=30.39 Aligned_cols=26 Identities=15% Similarity=0.363 Sum_probs=20.5
Q ss_pred CCCCCHHHHHHhhc-------cCcEEEEccCCC
Q 038413 1 GELDEHEKIVSILK-------EVDVVISTVAYP 26 (191)
Q Consensus 1 gD~~d~~~l~~a~~-------g~d~V~~~~~~~ 26 (191)
+|+.|.+++.++++ ..|++|+.+|..
T Consensus 60 ~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~ 92 (275)
T d1wmaa1 60 LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA 92 (275)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred EecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcC
Confidence 58999888776642 589999999864
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=83.59 E-value=1.6 Score=29.88 Aligned_cols=84 Identities=11% Similarity=-0.071 Sum_probs=48.4
Q ss_pred hhhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCc-ceeeecchhhHHHHHHHH
Q 038413 66 EAYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGE-AKAVFNYEEDIAKCTIKV 137 (191)
Q Consensus 66 ~~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~i~~~Dva~~~~~~ 137 (191)
..|..+|..++.+.+. .|+....+.||+......... .... ...... ..+-+...+|||.+++.+
T Consensus 170 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~---~~~~----~~~~~~pl~r~~~~peeva~~v~fL 242 (266)
T d1mxha_ 170 CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ---ETQE----EYRRKVPLGQSEASAAQIADAIAFL 242 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH---HHHH----HHHTTCTTTSCCBCHHHHHHHHHHH
T ss_pred hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCH---HHHH----HHHhcCCCCCCCCCHHHHHHHHHHH
Confidence 4566789888777543 578889999997543211000 0000 000000 012235789999999999
Q ss_pred hcCcc-c-CCceeEeecCCCcc
Q 038413 138 INDPR-T-CNRIVIYRPQTNII 157 (191)
Q Consensus 138 l~~~~-~-~~~~~~i~~~~~~~ 157 (191)
+.+.. . -|+.+.+.| +-.+
T Consensus 243 ~s~~s~~itG~~i~vDG-G~~l 263 (266)
T d1mxha_ 243 VSKDAGYITGTTLKVDG-GLIL 263 (266)
T ss_dssp HSGGGTTCCSCEEEEST-TGGG
T ss_pred hCchhCCccCCeEEECc-cHhh
Confidence 88653 2 367888875 5443
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=82.81 E-value=4.6 Score=28.77 Aligned_cols=31 Identities=10% Similarity=0.054 Sum_probs=22.1
Q ss_pred ecchhhHHHHHHHHhcCc-ccC-CceeEeecCCC
Q 038413 124 FNYEEDIAKCTIKVINDP-RTC-NRIVIYRPQTN 155 (191)
Q Consensus 124 ~i~~~Dva~~~~~~l~~~-~~~-~~~~~i~~~~~ 155 (191)
+...+|||.+++-++.+. ... |+.+.+.| +.
T Consensus 290 ~~~pedvA~~v~fLaSd~s~~iTGq~i~VDG-G~ 322 (329)
T d1uh5a_ 290 KLLSTDIGSVASFLLSRESRAITGQTIYVDN-GL 322 (329)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TG
T ss_pred CcCHHHHHHHHHHHhCchhCCccCCeEEECC-Cc
Confidence 457899999998887653 222 78888875 44
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=82.01 E-value=1.9 Score=29.32 Aligned_cols=83 Identities=7% Similarity=0.008 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHHHh-------cCCCeEEEecccccccccccccCCCCCCceEEEecCCcce-eeecchhhHHHHHHHHh
Q 038413 67 AYLEKKRIVRRAIEA-------VEIPYTFVSANCYGAYFVNVLLRPFEPHDDVVVYGNGEAK-AVFNYEEDIAKCTIKVI 138 (191)
Q Consensus 67 ~~~~~k~~~e~~l~~-------~~~~~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~~~Dva~~~~~~l 138 (191)
.|..+|..++.+.+. .|+....+.||++........... ............+ .-+...+|||.++.-++
T Consensus 154 ~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~---~~~~~~~~~~~~PlgR~g~p~eva~~v~fL~ 230 (257)
T d1fjha_ 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD---PRYGESIAKFVPPMGRRAEPSEMASVIAFLM 230 (257)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------CCCSTTSCCCTHHHHHHHHHHT
T ss_pred HHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC---HHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence 466789888877553 589999999998876543322110 0000000000011 11457899999999888
Q ss_pred cCcc-c-CCceeEeec
Q 038413 139 NDPR-T-CNRIVIYRP 152 (191)
Q Consensus 139 ~~~~-~-~~~~~~i~~ 152 (191)
.+.. . -|+.+.+.|
T Consensus 231 S~~s~~itG~~i~vDG 246 (257)
T d1fjha_ 231 SPAASYVHGAQIVIDG 246 (257)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CchhCCccCceEEeCC
Confidence 7543 2 377888874
|