Citrus Sinensis ID: 038452

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
MWSTRSSGLVVLQASLLILRFAATTSAIGVNYGTIANNLPKPAEVANFLKTKTTIDILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAGVMLNGAGAKTQPQPQPTDKKFCVPRPNTNPQSLQGNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALKGRRDDNDCDFKQTALLTTNNPSYGSCVYA
ccccHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccHHHHHHHHHHccHHHHHHHHcccccEEEEEcccccHHHcccHHHHHHHHHHccccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEHHccccccccccccccEEccccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccEEEEcccccccccccc
cccHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHcccHHHHHHHHccccEEEEEEccHHHHHHcccHHHHHHHHHHcHccccccEEEEEEEccHHcccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEHHHEEEcccHHHcEEcHHHHHHHHHHHHHHHHHccccEEEEccccEcccccccHHHcccccccEEccccccEEccHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHccHHHccccccccccEEEEccEccccccccHHHHHcccEcccccEcccEEcccccccccccccccccccEEEEEcccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccccccEEEc
MWSTRSSGLVVLQASLLILRFAATTSAigvnygtiannlpkpaeVANFLKTKTTIDILRAFANTNISVTvsvgngdipalvqlpaaknwvaanivpfypstkIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIkdikistpntlgflgvseppsagkfregydkdiIAPMLEFLRETKsafminpypyfnyadsisdyilfkpnkgvydpntritySNMFDAQMDAVYSAMRAlgysdvpivvaetgwpsagdpressatvdnaASFNWNLIQkvnsgkgtplmpnkqFETYIFALFNenkkpgatsernfglfkqdftpvydagvmlngagaktqpqpqptdkkfcvprpntnpqslqgnLDWVCsqgidcapiqpggscfepntlwSHAQYAMNAYYALkgrrddndcdfkqtallttnnpsygscvya
MWSTRSSGLVVLQASLLILRFAATTSAIGVNYGTIANNLPKPAEVANFLKTKTTIDILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVseppsagkfregYDKDIIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAGVMLNGAgaktqpqpqptDKKFCVPRPNTNPQSLQGNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALKGRRDDNDCDFKQTallttnnpsygscvya
MWSTRSSGLVVLQASLLILRFAATTSAIGVNYGTIANNLPKPAEVANFLKTKTTIDILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAGVMLNGAGAKTQPQPQPTDKKFCVPRPNTNPQSLQGNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALKGRRDDNDCDFKQTALLTTNNPSYGSCVYA
*******GLVVLQASLLILRFAATTSAIGVNYGTIANNLPKPAEVANFLKTKTTIDILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSE***AGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGW***************AASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNEN********RNFGLFKQDFTPVYDAGVMLN******************************GNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALKGRRDDNDCDFKQTALLTTN**********
******S*LVVLQASLLILRFAATTSAIGVNYGTIANNLPKPAEVANFLKTKTTIDILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWPSAGDPRESSATVDNAASFNWNLIQKVN******LM*NKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAGV********************************QGNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALKGRRDDNDCDFKQTALLTTNNPSYGSCVYA
********LVVLQASLLILRFAATTSAIGVNYGTIANNLPKPAEVANFLKTKTTIDILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWP***********VDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAGVMLNGAG**********DKKFCVPRPNTNPQSLQGNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALKGRRDDNDCDFKQTALLTTNNPSYGSCVYA
**STRSSGLVVLQASLLILRFAATTSAIGVNYGTIANNLPKPAEVANFLKTKTTIDILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAGVMLNGAGAKTQPQPQPTDKKFCVPRPNTNPQSLQGNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALKGRRDDNDCDFKQTALLTTNNPSYGSCVYA
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MWSTRSSGLVVLQASLLILRFAATTSAIGVNYGTIANNLPKPAEVANFLKTKTTIDILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAETGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAGVMLNGAGAKTQPQPQPTDKKFCVPRPNTNPQSLQGNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALKGRRDDNDCDFKQTALLTTNNPSYGSCVYA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query438 2.2.26 [Sep-21-2011]
P52409461 Glucan endo-1,3-beta-gluc N/A no 0.931 0.885 0.465 1e-111
Q9M069504 Glucan endo-1,3-beta-gluc no no 0.924 0.803 0.470 1e-103
Q94G86460 Glucan endo-1,3-beta-D-gl N/A no 0.936 0.891 0.442 1e-100
Q9ZU91501 Glucan endo-1,3-beta-gluc no no 0.924 0.808 0.412 3e-84
Q8VYE5534 Glucan endo-1,3-beta-gluc no no 0.947 0.777 0.387 2e-81
Q9FJU9506 Glucan endo-1,3-beta-gluc no no 0.931 0.806 0.390 2e-81
O65399511 Glucan endo-1,3-beta-gluc no no 0.920 0.788 0.372 2e-77
Q9C7U5505 Glucan endo-1,3-beta-gluc no no 0.924 0.801 0.393 4e-76
Q06915478 Probable glucan endo-1,3- no no 0.981 0.899 0.362 1e-75
Q94CD8505 Glucan endo-1,3-beta-gluc no no 0.908 0.788 0.383 8e-74
>sp|P52409|E13B_WHEAT Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1 Back     alignment and function desciption
 Score =  400 bits (1029), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/436 (46%), Positives = 278/436 (63%), Gaps = 28/436 (6%)

Query: 28  IGVNYGTIANNLPKPAEVANFLKTKTTID----------ILRAFANTNISVTVSVGNGDI 77
           IGVNYG  A+NLP P  VA FL TKTTID           + AFA T IS+ VS+ N  +
Sbjct: 26  IGVNYGANADNLPSPTSVATFLATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSAL 85

Query: 78  PALVQ----LPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINN 133
           PAL      L AA++W+ AN+ P+ P+T +  ++ GNEI+ S + + I +L+PAM+ +  
Sbjct: 86  PALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQ 145

Query: 134 ALIEAGIKDIKISTPNTLGFLGVSEP-PSAGKFREGYDKDIIAPMLEFLRETKSAFMINP 192
           AL   G+  ++++TP+ LG L  S+  PS   FR GY+  +   ML+F R+T S FM+NP
Sbjct: 146 ALKAEGLTGVRVTTPHYLGILAPSDGIPSNASFRAGYNTKLFPAMLQFHRDTGSPFMVNP 205

Query: 193 YPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAE 252
           YPYF+Y     +Y LF+PN G+YDP T++ Y++M DAQMDA+Y+AM+ LGY DV I V E
Sbjct: 206 YPYFSYRPETLNYALFRPNSGIYDPATKLNYTSMLDAQMDAIYTAMKKLGYGDVDIAVGE 265

Query: 253 TGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGA 312
            GWP+  +P +    V  A  FN  +I+  +SGKGTPLMPN+ FETY+F+LF+EN+KPG 
Sbjct: 266 AGWPTQAEPGQIGVGVQEARDFNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQKPGP 325

Query: 313 TSERNFGLFKQDFTPVYDAGVMLNGAGAKTQPQPQPT-----------DKKFCVPRPNTN 361
            +ER+FGLF  DFTPVYD G++ +GA     P P P+             K+CV +   N
Sbjct: 326 IAERHFGLFNPDFTPVYDLGLLRDGASVAPTPSPNPSPNPSPKPAPSGGGKWCVAKDGAN 385

Query: 362 PQSLQGNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALKGRRDDNDCDFKQ 421
              LQ N+++ C   +DC PIQ GG+CF PN+L +HA Y MNAYY   G   D  CDFK 
Sbjct: 386 GTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHT-DLACDFKG 443

Query: 422 TALLTTNNPSYGSCVY 437
           T ++T+++PSYG C Y
Sbjct: 444 TGIVTSSDPSYGGCKY 459
Is thought to be an important plant defense-related product against fungal pathogens.
Triticum aestivum (taxid: 4565)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q9M069|E137_ARATH Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2 Back     alignment and function description
>sp|Q94G86|ALL9_OLEEU Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZU91|E133_ARATH Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2 Back     alignment and function description
>sp|Q8VYE5|E1312_ARATH Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1 Back     alignment and function description
>sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1 Back     alignment and function description
>sp|O65399|E131_ARATH Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3 Back     alignment and function description
>sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2 Back     alignment and function description
>sp|Q06915|EA6_ARATH Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1 Back     alignment and function description
>sp|Q94CD8|E134_ARATH Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query438
225449529447 PREDICTED: glucan endo-1,3-beta-glucosid 0.988 0.968 0.599 1e-159
224100989448 predicted protein [Populus trichocarpa] 0.954 0.933 0.603 1e-154
118487813448 unknown [Populus trichocarpa] 0.954 0.933 0.600 1e-153
255580057447 Glucan endo-1,3-beta-glucosidase precurs 0.931 0.912 0.611 1e-148
224100991454 predicted protein [Populus trichocarpa] 0.942 0.909 0.578 1e-146
255580059457 Glucan endo-1,3-beta-glucosidase precurs 0.984 0.943 0.551 1e-144
449467926489 PREDICTED: glucan endo-1,3-beta-glucosid 0.933 0.836 0.582 1e-144
255584220488 Glucan endo-1,3-beta-glucosidase precurs 0.938 0.842 0.590 1e-141
449520924447 PREDICTED: glucan endo-1,3-beta-glucosid 0.958 0.939 0.565 1e-139
224054732457 glycoside hydrolase [Populus trichocarpa 0.936 0.897 0.554 1e-137
>gi|225449529|ref|XP_002283647.1| PREDICTED: glucan endo-1,3-beta-glucosidase isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 268/447 (59%), Positives = 350/447 (78%), Gaps = 14/447 (3%)

Query: 1   MWSTRSSGLVVLQASLLILRFAATTSAIGVNYGTIANNLPKPAEVANFLKTKTTID---- 56
           + + +S   V+   S L+  F+AT  +IGVNYGT+A+NLP PA+VANFLKT+TTID    
Sbjct: 3   LLALQSLRFVIFGVSALL--FSATAYSIGVNYGTLADNLPPPAQVANFLKTRTTIDQIKI 60

Query: 57  ------ILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPFYPSTKIIRVVVGN 110
                 ILRAFA+T I VT++VGNGDIPA+ +LPAA++WVA +I+PFYPSTKI  V VGN
Sbjct: 61  FDSNPDILRAFASTGIGVTITVGNGDIPAITKLPAARDWVATHILPFYPSTKINYVAVGN 120

Query: 111 EIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYD 170
           EIM +A+K+ I +LVPAMK+++NAL+ A I DIK+STP++LG L +SEPPS G+FR GYD
Sbjct: 121 EIMATADKNLIGHLVPAMKALHNALVLAKITDIKVSTPHSLGILSMSEPPSVGRFRRGYD 180

Query: 171 KDIIAPMLEFLRETKSAFMINPYPYFNYADSISDYILFKPNKGVYDPNTRITYSNMFDAQ 230
           K I APMLEF R+TKS FM+NPYPYF ++ ++ +Y +FKPN+GV+D  T ITY+NMFDAQ
Sbjct: 181 KVIFAPMLEFHRQTKSPFMVNPYPYFGFSPNMLNYCIFKPNRGVHDKFTGITYTNMFDAQ 240

Query: 231 MDAVYSAMRALGYSDVPIVVAETGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPL 290
           MDAVYSAM+ LGY DV I+VAETGWPS GDP +    ++NAAS+N NL++ ++SGKGTPL
Sbjct: 241 MDAVYSAMKVLGYGDVEIMVAETGWPSLGDPNQVGVNLENAASYNGNLLKHISSGKGTPL 300

Query: 291 MPNKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAGVMLNGAGAKTQPQPQPTD 350
           MPN++F+TY+F+LFNEN KPG+T+ERNFGLF+ DFTPVYD G++   AG    P   P+ 
Sbjct: 301 MPNRRFQTYLFSLFNENLKPGSTAERNFGLFRPDFTPVYDIGILKQSAGGAPTPT-VPSG 359

Query: 351 KKFCVPRPNTNPQSLQGNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALKG 410
           KK+CVP+P+   ++LQ N+++VCS G+DC PIQPGG+C++PNT+ SHA YAMNAYY   G
Sbjct: 360 KKWCVPKPDATDEALQSNINYVCSTGVDCKPIQPGGACYDPNTIRSHASYAMNAYYQTSG 419

Query: 411 RRDDNDCDFKQTALLTTNNPSYGSCVY 437
           R D N CDF  T +L T++PS+G C Y
Sbjct: 420 RHDFN-CDFANTGVLATSDPSHGPCQY 445

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224100989|ref|XP_002312097.1| predicted protein [Populus trichocarpa] gi|222851917|gb|EEE89464.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118487813|gb|ABK95730.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255580057|ref|XP_002530862.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gi|223529586|gb|EEF31536.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224100991|ref|XP_002312098.1| predicted protein [Populus trichocarpa] gi|222851918|gb|EEE89465.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255580059|ref|XP_002530863.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gi|223529587|gb|EEF31537.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449467926|ref|XP_004151673.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cucumis sativus] gi|449523952|ref|XP_004168987.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255584220|ref|XP_002532848.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gi|223527385|gb|EEF29526.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449520924|ref|XP_004167482.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224054732|ref|XP_002298356.1| glycoside hydrolase [Populus trichocarpa] gi|222845614|gb|EEE83161.1| glycoside hydrolase [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query438
TAIR|locus:2100011449 AT3G55430 [Arabidopsis thalian 0.974 0.951 0.513 1.4e-117
TAIR|locus:1009023441458 AT5G24318 [Arabidopsis thalian 0.979 0.936 0.495 2.2e-114
TAIR|locus:2139519504 AT4G34480 [Arabidopsis thalian 0.924 0.803 0.473 3.7e-103
TAIR|locus:2039742 549 AT2G39640 [Arabidopsis thalian 0.940 0.750 0.473 5.6e-100
TAIR|locus:2042604503 AT2G16230 [Arabidopsis thalian 0.929 0.809 0.458 5e-99
TAIR|locus:2075205356 AT3G46570 [Arabidopsis thalian 0.721 0.887 0.555 3.9e-92
TAIR|locus:2161710465 AT5G55180 [Arabidopsis thalian 0.956 0.901 0.425 5.6e-84
TAIR|locus:2056519472 AT2G05790 [Arabidopsis thalian 0.716 0.665 0.444 1.1e-82
TAIR|locus:2116327455 AT4G26830 [Arabidopsis thalian 0.936 0.901 0.414 7.4e-82
TAIR|locus:2065403501 AT2G01630 [Arabidopsis thalian 0.965 0.844 0.405 2.5e-81
TAIR|locus:2100011 AT3G55430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
 Identities = 230/448 (51%), Positives = 307/448 (68%)

Query:     6 SSGLVVLQASLLILRFAATTSAIGVNYGTIANNLPKPAEVANFLKTKTTID--------- 56
             S  L++L  + + L   A  SAIGVNYGT+ N LP P +VANF+KT+T+ID         
Sbjct:     7 SISLLLLLCAAVFLTIPAVISAIGVNYGTLGN-LPPPTQVANFIKTQTSIDSVKIFDVNP 65

Query:    57 -ILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPFYPSTKIIRVVVGNEIMQS 115
              ILRAFA T ISV V+V NGDIPAL     A+ WV+ NI+PF+P TKI  + VGNEI+ +
Sbjct:    66 DILRAFAGTGISVVVTVPNGDIPALANGRQARRWVSVNILPFHPQTKIKYISVGNEILLT 125

Query:   116 ANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLG--VSEPPSAGKFREGYDKDI 173
              + + I NL+PAM+++NNAL+ AG++D+K++T ++L  +   ++  PS+G+FR G+DK I
Sbjct:   126 GDNNMINNLLPAMRNLNNALVRAGVRDVKVTTAHSLNIIAYDLTGAPSSGRFRPGWDKGI 185

Query:   174 IAPMLEFLRETKSAFMINPYPYFNYADSISDYILFK-PNKGVYDPNTRITYSNMFDAQMD 232
             +AP+L + R TKS FM+NPYPYF +     ++ +F+ P K V DP TR  Y+NMFDA MD
Sbjct:   186 LAPILAYHRRTKSPFMVNPYPYFGFDPKNVNFAIFRTPYKAVRDPFTRHVYTNMFDALMD 245

Query:   233 AVYSAMRALGYSDVPIVVAETGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMP 292
             + YSAM+ALGY DV IVV ETGWPSA D    S    NAA FN N+I++   G+GTPLMP
Sbjct:   246 STYSAMKALGYGDVNIVVGETGWPSACDAPWCSPA--NAAWFNLNIIKRAQ-GQGTPLMP 302

Query:   293 NKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAGVMLNGAGAKTQPQ-PQPTDK 351
             N++FETYIF LFNE  KPG T+ERN+GLF+ DF+PVYD G++ NG G   +P  P P+  
Sbjct:   303 NRRFETYIFGLFNEEGKPGPTAERNWGLFRADFSPVYDVGLLRNGQGGGGRPALPAPSTA 362

Query:   352 --KFCVPRPNTNPQSLQGNLDWVCSQGIDCAPIQPGGSCFEPNTLWSHAQYAMNAYYALK 409
               K+CV R       LQ +++WVC QG+DC PIQ GGSCF P++L +HA + MNAY+   
Sbjct:   363 GGKWCVARSGATNTQLQDSINWVCGQGVDCKPIQAGGSCFNPSSLRTHASFVMNAYFQSH 422

Query:   410 GRRDDNDCDFKQTALLTTNNPSYGSCVY 437
             GR D   C+F  T ++  NNPS G+C Y
Sbjct:   423 GRTD-GACNFSGTGMIVGNNPSNGACKY 449
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0010200 "response to chitin" evidence=RCA
TAIR|locus:1009023441 AT5G24318 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139519 AT4G34480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2039742 AT2G39640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042604 AT2G16230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075205 AT3G46570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161710 AT5G55180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056519 AT2G05790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116327 AT4G26830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065403 AT2G01630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.390.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00018493001
SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (440 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query438
pfam00332310 pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam 8e-88
smart0076885 smart00768, X8, Possibly involved in carbohydrate 6e-38
pfam0798377 pfam07983, X8, X8 domain 2e-18
COG5309305 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohyd 4e-05
>gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 Back     alignment and domain information 
 Score =  269 bits (690), Expect = 8e-88
 Identities = 125/318 (39%), Positives = 176/318 (55%), Gaps = 26/318 (8%)

Query: 28  IGVNYGTIANNLPKPAEVANFLKTKTTID---------ILRAFANTNISVTVSVGNGDIP 78
           IGV YG   NNLP P++V +  K+               L+A   + I+V + V N D+ 
Sbjct: 1   IGVCYGVKGNNLPSPSDVVSLYKSNNIRRMRIYDPDTKALKALRGSGINVILGVPNDDLA 60

Query: 79  ALVQLP-AAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIE 137
            L      A +WV  N+ P+ P  KI  + VGNE+     + +   LVPAM++I NAL  
Sbjct: 61  ELAGSQSNAASWVQDNVRPYAPKVKIRYIAVGNEVSPGTTQSF---LVPAMRNIRNALTA 117

Query: 138 AGIKD-IKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYF 196
           AG+ + IK+ST      LG S PPS G FR    +  + P++ FL  T +  + N YPYF
Sbjct: 118 AGLGNKIKVSTSVRFDILGNSFPPSYGSFRVET-RSFMDPIIVFLAGTNAPLLANVYPYF 176

Query: 197 NYADSISD----YILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAE 252
            Y+++  D    Y LF+P   V D      Y N+FDA +DAVY+A+   G   V +VV+E
Sbjct: 177 AYSNNPRDISLNYALFQPGTTVVDGGL--GYQNLFDAMVDAVYAALEKAGGPSVEVVVSE 234

Query: 253 TGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGA 312
           +GWPS G     +AT++NA ++N NLI  V   KGTP  P    ETY+FA+F+EN+KPG 
Sbjct: 235 SGWPSDGG---FAATIENARTYNQNLINHV--KKGTPKRPGWAIETYVFAMFDENQKPGE 289

Query: 313 TSERNFGLFKQDFTPVYD 330
           + E++FGLF  +  P Y 
Sbjct: 290 SVEKHFGLFYPNKQPKYP 307

Length = 310
>gnl|CDD|197867 smart00768, X8, Possibly involved in carbohydrate binding Back     alignment and domain information
>gnl|CDD|219681 pfam07983, X8, X8 domain Back     alignment and domain information
>gnl|CDD|227625 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 438
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 100.0
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 100.0
smart0076885 X8 Possibly involved in carbohydrate binding. The 99.96
PF0798378 X8: X8 domain; InterPro: IPR012946 The X8 domain [ 99.87
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 98.68
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 97.92
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 97.81
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 97.43
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 97.03
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 96.72
PRK10150604 beta-D-glucuronidase; Provisional 96.71
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 85.14
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information 
Probab=100.00  E-value=1.3e-83  Score=643.03  Aligned_cols=295  Identities=50%  Similarity=0.885  Sum_probs=241.7

Q ss_pred             ceEEeccCCCCCCCHHHHHHHHHhcC---------chHHHHHHhhCCCEEEEEecCCCcccccC-hHHHHHHHHhhcccc
Q 038452           28 IGVNYGTIANNLPKPAEVANFLKTKT---------TIDILRAFANTNISVTVSVGNGDIPALVQ-LPAAKNWVAANIVPF   97 (438)
Q Consensus        28 ~Gvnyg~~~~nlpsp~~vv~ll~s~~---------~~~vL~A~~~tgi~v~vGv~n~~l~~~a~-~~~A~~wv~~~v~~~   97 (438)
                      ||||||++|+|||+|.+|++|||+++         ++.+|+|+++|||+|++||+|++++++++ +..|..||++||.+|
T Consensus         1 iGvnyG~~~~nlp~p~~vv~l~ks~~i~~vri~d~~~~iL~a~a~S~i~v~v~vpN~~l~~la~~~~~A~~Wv~~nv~~~   80 (310)
T PF00332_consen    1 IGVNYGRVGNNLPSPCKVVSLLKSNGITKVRIYDADPSILRAFAGSGIEVMVGVPNEDLASLASSQSAAGSWVRTNVLPY   80 (310)
T ss_dssp             EEEEE---SSS---HHHHHHHHHHTT--EEEESS--HHHHHHHTTS--EEEEEE-GGGHHHHHHHHHHHHHHHHHHTCTC
T ss_pred             CeEeccCccCCCCCHHHHHHHHHhcccccEEeecCcHHHHHHHhcCCceeeeccChHHHHHhccCHHHHhhhhhhccccc
Confidence            79999999999999999999999976         89999999999999999999999999999 999999999999999


Q ss_pred             CCCceEEEEEeccccccCCCcchHHhHHHHHHHHHHHHHHcCC-CceeeecccccccccccCCCCCccccCCcchhhhhh
Q 038452           98 YPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGI-KDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAP  176 (438)
Q Consensus        98 ~p~~~I~~I~VGNEvl~~~~~~~~~~Ll~am~nv~~aL~~~gl-~~IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~~~~~  176 (438)
                      +|.++|++|+||||++..... .  .|+|+|+|+|++|+++|| ++|||+|+++++++..+||||.|.|++++. ++|++
T Consensus        81 ~~~~~i~~i~VGnEv~~~~~~-~--~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PPS~g~F~~~~~-~~~~~  156 (310)
T PF00332_consen   81 LPAVNIRYIAVGNEVLTGTDN-A--YLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPPSAGVFRSDIA-SVMDP  156 (310)
T ss_dssp             TTTSEEEEEEEEES-TCCSGG-G--GHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSGGG-EESHHHH-HHHHH
T ss_pred             CcccceeeeecccccccCccc-e--eeccHHHHHHHHHHhcCcCCcceeccccccccccccCCCccCcccccch-hhhhH
Confidence            999999999999999987422 2  899999999999999999 689999999999999999999999999987 79999


Q ss_pred             HHHHHHhcCCcccccCCCCcccCCC----ccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEee
Q 038452          177 MLEFLRETKSAFMINPYPYFNYADS----ISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAE  252 (438)
Q Consensus       177 ~l~fL~~~~d~~~vNiyPff~~~~~----~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~E  252 (438)
                      +++||.++++|||+|+||||++..+    ++|||+|+++..++|.  +++|+||||+|+|++++||+|+|+++++|+|+|
T Consensus       157 ~l~fL~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~~~~~~D~--~~~y~nlfDa~~da~~~a~~~~g~~~~~vvv~E  234 (310)
T PF00332_consen  157 LLKFLDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQPNSGVVDG--GLAYTNLFDAMVDAVYAAMEKLGFPNVPVVVGE  234 (310)
T ss_dssp             HHHHHHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-SSS-SEET--TEEESSHHHHHHHHHHHHHHTTT-TT--EEEEE
T ss_pred             HHHHhhccCCCceeccchhhhccCCcccCCccccccccccccccc--chhhhHHHHHHHHHHHHHHHHhCCCCceeEEec
Confidence            9999999999999999999999766    8999999998777765  889999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCCCCCCCCCCCcceecccCCCCeeeeee
Q 038452          253 TGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAG  332 (438)
Q Consensus       253 TGWPS~G~~~~~~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE~~K~g~~~E~~wGlf~~d~~~ky~l~  332 (438)
                      |||||+|+.   +|+++||+.|++++++|+.  .|||+||+..+++||||||||+||+|+.+|||||||++||++||+|+
T Consensus       235 TGWPs~G~~---~a~~~nA~~~~~nl~~~~~--~gt~~~~~~~~~~y~F~~FdE~~K~~~~~E~~wGlf~~d~~~ky~~~  309 (310)
T PF00332_consen  235 TGWPSAGDP---GATPENAQAYNQNLIKHVL--KGTPLRPGNGIDVYIFEAFDENWKPGPEVERHWGLFYPDGTPKYDLD  309 (310)
T ss_dssp             E---SSSST---TCSHHHHHHHHHHHHHHCC--GBBSSSBSS---EEES-SB--TTSSSSGGGGG--SB-TTSSBSS---
T ss_pred             cccccCCCC---CCCcchhHHHHHHHHHHHh--CCCcccCCCCCeEEEEEEecCcCCCCCcccceeeeECCCCCeecCCC
Confidence            999999983   5999999999999999996  79999999999999999999999998779999999999999999998


Q ss_pred             c
Q 038452          333 V  333 (438)
Q Consensus       333 ~  333 (438)
                      |
T Consensus       310 f  310 (310)
T PF00332_consen  310 F  310 (310)
T ss_dssp             -
T ss_pred             C
Confidence            6

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00768 X8 Possibly involved in carbohydrate binding Back     alignment and domain information
>PF07983 X8: X8 domain; InterPro: IPR012946 The X8 domain [] contains 6 conserved cysteine residues that presumably form three disulphide bridges Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query438
2cyg_A312 Crystal Structure At 1.45- Resolution Of The Major 2e-51
3ur7_A323 Higher-density Crystal Structure Of Potato Endo-1,3 6e-49
1ghs_A306 The Three-Dimensional Structures Of Two Plant Beta- 4e-48
4gzi_A323 Active-site Mutant Of Potato Endo-1,3-beta-glucanas 4e-48
3em5_A316 Crystal Structure Of A Native Endo Beta-1,3-Glucana 8e-47
1aq0_A306 Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space G 3e-43
2jon_A101 Solution Structure Of The C-Terminal Domain Ole E 9 4e-25
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 Back     alignment and structure 
Iteration: 1

 Score =  199 bits (506), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/318 (39%), Positives = 189/318 (59%), Gaps = 24/318 (7%)
Query: 28  IGVNYGTIANNLPKPAEVANFLKTKTTIDI---------LRAFANTNISVTVSVGNGDIP 78
           IGV YG + NNLP P+EV +  K+     +         L+A  N+NI V + V   D+ 
Sbjct: 1   IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60
Query: 79  ALVQLP-AAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIE 137
           +L   P AA +W+  N+V ++PS     + VGNE++  +  D    ++PAM++I NAL  
Sbjct: 61  SLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGS--DLAQYILPAMRNIYNALSS 118
Query: 138 AGIKD-IKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYF 196
           AG+++ IK+ST    G LG S PPSAG F     +  ++P+++FL    +  ++N YPYF
Sbjct: 119 AGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSA-AQAYLSPIVQFLASNGAPLLVNVYPYF 177
Query: 197 NYADSISD----YILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAE 252
           +Y  +       Y LF  + GV   + R +Y N+FDA +DAV++A+  +G ++V +VV+E
Sbjct: 178 SYTGNPGQISLPYALFTAS-GVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSE 236
Query: 253 TGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGA 312
           +GWPSAG   E+S +  NA ++N NLI+ V  G GTP  P K+ E YIF +FNEN+K G 
Sbjct: 237 SGWPSAGGGAEASTS--NAQTYNQNLIRHV--GGGTPRRPGKEIEAYIFEMFNENQKAGG 292
Query: 313 TSERNFGLFKQDFTPVYD 330
             E+NFGLF  +  PVY 
Sbjct: 293 I-EQNFGLFYPNKQPVYQ 309
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 Back     alignment and structure
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities Length = 306 Back     alignment and structure
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 Back     alignment and structure
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 Back     alignment and structure
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group Length = 306 Back     alignment and structure
>pdb|2JON|A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 Length = 101 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query438
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 7e-93
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 2e-87
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 1e-86
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 2e-86
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 1e-83
2jon_A101 Beta-1,3-glucanase; olive pollen, allergen; NMR {O 6e-37
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 Back     alignment and structure
 Score =  282 bits (721), Expect = 7e-93
 Identities = 115/317 (36%), Positives = 169/317 (53%), Gaps = 28/317 (8%)

Query: 28  IGVNYGTIANNLPKPAEVANFLKTKTTI---------DILRAFANTNISVTVSVGNGDIP 78
           IGV YG I NNLP  ++V    ++K              L A  N+ I + + +GN  + 
Sbjct: 1   IGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLA 60

Query: 79  ALVQLP-AAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIE 137
            +      A +WV  N+ P+YP+  I  +  GNE+   A +     ++PAM+++N AL  
Sbjct: 61  NIAASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQGGATQS----ILPAMRNLNAALSA 116

Query: 138 AGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYFN 197
           AG+  IK+ST      +  S PPSAG F+  Y    +  +   L  T +  + N YPYF 
Sbjct: 117 AGLGAIKVSTSIRFDEVANSFPPSAGVFKNAY----MTDVARLLASTGAPLLANVYPYFA 172

Query: 198 YADSIS----DYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAET 253
           Y D+      +Y  F+P   V D N  +TY+++FDA +DAVY+A+   G   V +VV+E+
Sbjct: 173 YRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSES 232

Query: 254 GWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGAT 313
           GWPSAG     +A+  NA ++N  LI  V  G        +  ETYIFA+FNEN+K G  
Sbjct: 233 GWPSAGGF---AASAGNARTYNQGLINHVGGGTP---KKREALETYIFAMFNENQKTGDA 286

Query: 314 SERNFGLFKQDFTPVYD 330
           +ER+FGLF  D +P Y+
Sbjct: 287 TERSFGLFNPDKSPAYN 303
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 Back     alignment and structure
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 Back     alignment and structure
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Length = 101 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Length = 555 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query438
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 100.0
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 100.0
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 100.0
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 100.0
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 100.0
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 100.0
2jon_A101 Beta-1,3-glucanase; olive pollen, allergen; NMR {O 99.97
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 99.41
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 99.35
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 99.12
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 98.68
4ekj_A500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 98.31
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 98.18
1w91_A503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 98.05
1uhv_A500 Beta-xylosidase; family 39 glycoside hydrolase, xy 97.98
3cmg_A667 Putative beta-galactosidase; structural genomics, 97.91
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 97.86
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 97.74
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 97.65
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 97.52
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 97.27
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 97.24
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 97.23
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 97.22
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 97.13
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 97.11
3fn9_A692 Putative beta-galactosidase; structural genomics, 97.1
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 97.05
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 96.97
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 96.96
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 96.96
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 96.88
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 96.74
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 96.55
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 96.49
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 96.46
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 96.41
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 96.36
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 96.34
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 96.25
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 96.21
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 96.19
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 96.05
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 96.04
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 95.99
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 95.93
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 95.93
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 95.89
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 95.81
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 95.8
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 95.46
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 95.44
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 95.41
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 95.29
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 95.17
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 94.92
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 94.68
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 94.52
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 94.49
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 94.44
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 94.36
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 94.26
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 94.14
1qw9_A502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 94.03
2c7f_A513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 93.77
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 93.61
3vny_A488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 93.39
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 92.84
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 92.64
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 92.4
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 92.29
2vrq_A496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 92.01
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 91.92
2y2w_A574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 91.3
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 89.32
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 88.84
3emz_A331 Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba 87.1
3d3a_A 612 Beta-galactosidase; protein structure initiative I 83.68
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 83.02
3ug3_A504 Alpha-L-arabinofuranosidase; TIM barrel, hydrolase 81.98
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 81.83
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
Probab=100.00  E-value=2.6e-93  Score=710.68  Aligned_cols=299  Identities=38%  Similarity=0.651  Sum_probs=283.2

Q ss_pred             cceEEeccCCCCCCCHHHHHHHHHhcC---------chHHHHHHhhCCCEEEEEecCCCcccccChHHHHHHHHhhcccc
Q 038452           27 AIGVNYGTIANNLPKPAEVANFLKTKT---------TIDILRAFANTNISVTVSVGNGDIPALVQLPAAKNWVAANIVPF   97 (438)
Q Consensus        27 ~~Gvnyg~~~~nlpsp~~vv~ll~s~~---------~~~vL~A~~~tgi~v~vGv~n~~l~~~a~~~~A~~wv~~~v~~~   97 (438)
                      .||||||++|+|||+|++||+|||+++         |+++|+||+++||+|+|||||+++++++++.+|.+||++||.+|
T Consensus         1 ~iGvnyG~~~~nlp~p~~vv~llks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n~~l~~la~~~~A~~WV~~nV~~y   80 (316)
T 3em5_A            1 EVGVCYGMQGNNLPPVSEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQSLTNPSNAKSWVQKNVRGF   80 (316)
T ss_dssp             CCEEECCCCCTTCCCHHHHHHHHHHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECGGGHHHHTSHHHHHHHHHHHTGGG
T ss_pred             CeeEEcCcCCCCCCCHHHHHHHHHHcCCCEEEEecCCHHHHHHhhcCCceEEEecccchhhhccCHHHHHHHHHHhhhhc
Confidence            489999999999999999999999987         89999999999999999999999999988888999999999999


Q ss_pred             CCCceEEEEEeccccccCCCcch---HHhHHHHHHHHHHHHHHcCC-CceeeecccccccccccCCCCCccccCCcchhh
Q 038452           98 YPSTKIIRVVVGNEIMQSANKDW---IYNLVPAMKSINNALIEAGI-KDIKISTPNTLGFLGVSEPPSAGKFREGYDKDI  173 (438)
Q Consensus        98 ~p~~~I~~I~VGNEvl~~~~~~~---~~~Ll~am~nv~~aL~~~gl-~~IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~~  173 (438)
                      +|+++|++|+||||++.+.+ .+   +..|+|||+|||++|+++|| ++|||||++++++|.+|||||+|.||+++. ++
T Consensus        81 ~p~~~I~~IaVGNEvl~~~~-~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl~~s~pPS~g~F~~~~~-~~  158 (316)
T 3em5_A           81 WSSVRFRYIAVGNEISPVNR-GTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVR-SY  158 (316)
T ss_dssp             TTTSCEEEEEEEESCCTTCT-TTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSEEECSSGGGCEECGGGH-HH
T ss_pred             CCCceEEEEEEecccccCCC-ccccCHHHHHHHHHHHHHHHHHCCCCCceEEEecccccccccCCCCCCceechhHH-HH
Confidence            99999999999999999843 33   89999999999999999999 779999999999999999999999999997 79


Q ss_pred             hhhHHHHHHhcCCcccccCCCCcccCCC----ccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEE
Q 038452          174 IAPMLEFLRETKSAFMINPYPYFNYADS----ISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIV  249 (438)
Q Consensus       174 ~~~~l~fL~~~~d~~~vNiyPff~~~~~----~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vv  249 (438)
                      |+|||+||++++||||||+||||+|..+    ++|||+|++ .+++|++++++|+||||||+||+++||+|+|+++++|+
T Consensus       159 ~~pil~fL~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~-~~~~~~~~~~~Y~nlfDa~~Da~~~Al~~~g~~~~~v~  237 (316)
T 3em5_A          159 LNPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTS-PSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVV  237 (316)
T ss_dssp             HHHHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCC-SSCSEEETTEEECSHHHHHHHHHHHHHHHTTCTTCCEE
T ss_pred             HHHHHHHHHhcCCeeEeecchhhhccCCCCCcCchhhcccC-CCcccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCceE
Confidence            9999999999999999999999999754    799999998 56788889999999999999999999999999999999


Q ss_pred             EeeccCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCCCCCCCCCCCcceecccCCCCeee
Q 038452          250 VAETGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVY  329 (438)
Q Consensus       250 V~ETGWPS~G~~~~~~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE~~K~g~~~E~~wGlf~~d~~~ky  329 (438)
                      |+||||||+|+.   +||++||++|+++|++|+  +.|||+|||..+++|||+||||+||+ ++.|||||||++|++|||
T Consensus       238 V~EtGWPs~G~~---~as~~na~~y~~~li~~~--~~GTP~rp~~~~~~y~F~lfDe~~K~-~~~E~~~Glf~~d~~~ky  311 (316)
T 3em5_A          238 VSESGWPSAGAF---AATFDNGRTYLSNLIQHV--KRGTPKRPKRAIETYLFAMFDENKKQ-PEVEKHFGLFFPNKWQKY  311 (316)
T ss_dssp             EEEECCCSSSST---TCCHHHHHHHHHHHHHHT--TSCCSSSCSSCCCEEESCSBCCTTCS-SGGGGCCCSBCTTSCBSS
T ss_pred             eccccCCCCCCC---CCCHHHHHHHHHHHHHhc--cCCCCCCCCCCceEEEEEeecCCCCC-CCCCceeeEECCCCCEee
Confidence            999999999974   699999999999999999  57999999999999999999999998 489999999999999999


Q ss_pred             eeecc
Q 038452          330 DAGVM  334 (438)
Q Consensus       330 ~l~~~  334 (438)
                      +|+|.
T Consensus       312 ~l~~~  316 (316)
T 3em5_A          312 NLNFS  316 (316)
T ss_dssp             CCCCC
T ss_pred             cCCCC
Confidence            99873
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 438
d2cyga1312 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( 1e-94
d1ghsa_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 1e-93
d1aq0a_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 3e-90
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

 Score =  285 bits (730), Expect = 1e-94
 Identities = 126/318 (39%), Positives = 183/318 (57%), Gaps = 24/318 (7%)

Query: 28  IGVNYGTIANNLPKPAEVANFLKTK---------TTIDILRAFANTNISVTVSVGNGDIP 78
           IGV YG + NNLP P+EV +  K+               L+A  N+NI V + V   D+ 
Sbjct: 1   IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60

Query: 79  ALVQLP-AAKNWVAANIVPFYPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIE 137
           +L   P AA +W+  N+V ++PS     + VGNE++  +  D    ++PAM++I NAL  
Sbjct: 61  SLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGS--DLAQYILPAMRNIYNALSS 118

Query: 138 AGI-KDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPMLEFLRETKSAFMINPYPYF 196
           AG+   IK+ST    G LG S PPSAG F        ++P+++FL    +  ++N YPYF
Sbjct: 119 AGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQ-AYLSPIVQFLASNGAPLLVNVYPYF 177

Query: 197 NYADSIS----DYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAE 252
           +Y  +       Y LF  + GV   + R +Y N+FDA +DAV++A+  +G ++V +VV+E
Sbjct: 178 SYTGNPGQISLPYALFTAS-GVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSE 236

Query: 253 TGWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGA 312
           +GWPSAG   E  A+  NA ++N NLI+ V    GTP  P K+ E YIF +FNEN+K G 
Sbjct: 237 SGWPSAGGGAE--ASTSNAQTYNQNLIRHVG--GGTPRRPGKEIEAYIFEMFNENQKAGG 292

Query: 313 TSERNFGLFKQDFTPVYD 330
             E+NFGLF  +  PVY 
Sbjct: 293 I-EQNFGLFYPNKQPVYQ 309
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query438
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 100.0
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 98.77
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 98.7
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 98.62
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 98.29
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 98.22
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 98.02
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 97.95
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 97.82
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 97.81
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 97.62
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 97.45
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 97.17
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 96.93
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 96.77
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 96.72
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 96.67
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 96.59
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 96.41
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 96.27
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 96.19
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 96.11
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 95.93
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 95.62
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 95.59
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 95.54
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 94.81
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 94.75
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 93.11
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 91.35
d2v3ga1273 Endoglucanase H N-terminal domain {Clostridium the 90.01
d2f6ka1306 Putative amidohydrolase LP2961 {Lactobacillus plan 89.74
d1v02a_484 Plant beta-glucosidase (myrosinase) {Sorghum bicol 87.47
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 86.59
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 86.53
d1qw9a2367 Alpha-L-arabinofuranosidase, catalytic domain {Bac 85.49
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 84.75
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]

Probab=100.00  E-value=1.8e-81  Score=624.20  Aligned_cols=292  Identities=40%  Similarity=0.719  Sum_probs=277.1

Q ss_pred             ceEEeccCCCCCCCHHHHHHHHHhcC---------chHHHHHHhhCCCEEEEEecCCCcccccC-hHHHHHHHHhhcccc
Q 038452           28 IGVNYGTIANNLPKPAEVANFLKTKT---------TIDILRAFANTNISVTVSVGNGDIPALVQ-LPAAKNWVAANIVPF   97 (438)
Q Consensus        28 ~Gvnyg~~~~nlpsp~~vv~ll~s~~---------~~~vL~A~~~tgi~v~vGv~n~~l~~~a~-~~~A~~wv~~~v~~~   97 (438)
                      ||||||++|+|||||++|++|||+++         |++||+|++++||+|+|||||+++.++++ ++.++.||+++|++|
T Consensus         1 ~gi~yg~~~~n~ps~~~Vv~llks~~i~~VRlY~~d~~vL~A~~~~gi~v~lGv~n~~l~~~~~~~~~a~~~v~~~i~~~   80 (306)
T d1ghsa_           1 IGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLANIAASTSNAASWVQNNVRPY   80 (306)
T ss_dssp             CEEECCCCSSSCCCHHHHHHHHHHHTCCEEEESSCCHHHHHHTTTSCCEEEEECCGGGHHHHHHCHHHHHHHHHHHTTTT
T ss_pred             CeeeCCCccCCCCCHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHhcCCEEEEEeccchhhhhccCHHHHHHHHHHHHHhh
Confidence            79999999999999999999999976         89999999999999999999999999988 999999999999999


Q ss_pred             CCCceEEEEEeccccccCCCcchHHhHHHHHHHHHHHHHHcCCCceeeecccccccccccCCCCCccccCCcchhhhhhH
Q 038452           98 YPSTKIIRVVVGNEIMQSANKDWIYNLVPAMKSINNALIEAGIKDIKISTPNTLGFLGVSEPPSAGKFREGYDKDIIAPM  177 (438)
Q Consensus        98 ~p~~~I~~I~VGNEvl~~~~~~~~~~Ll~am~nv~~aL~~~gl~~IkVsT~~~~~vl~~s~pPS~g~F~~~~~~~~~~~~  177 (438)
                      +|+++|++|+||||++.+.    ...|+|+|++||++|+++||.+|+++|++.++++.+++|||.|.|+.+    .|.++
T Consensus        81 ~~~~~I~~I~VGNEvl~~~----~~~l~~a~~~i~~al~~~gl~~i~v~t~~~~~~~~~~~p~s~~~f~~~----~~~~~  152 (306)
T d1ghsa_          81 YPAVNIKYIAAGNEVQGGA----TQSILPAMRNLNAALSAAGLGAIKVSTSIRFDEVANSFPPSAGVFKNA----YMTDV  152 (306)
T ss_dssp             TTTSEEEEEEEEESCCGGG----GGGHHHHHHHHHHHHHHHTCTTSEEEEEEEGGGEECCSSGGGCEESST----HHHHH
T ss_pred             CCCceEEEEEecceeccCC----cchhHHHHHHHHHHHHHCCCCCceeecccccccccCCCCCCccccchh----hhhHH
Confidence            9999999999999999873    468999999999999999997799999999999999999999999875    68999


Q ss_pred             HHHHHhcCCcccccCCCCcccCCC----ccccccccCCCccccCCCcccchhhHHHHHHHHHHHHHHcCCCCCCEEEeec
Q 038452          178 LEFLRETKSAFMINPYPYFNYADS----ISDYILFKPNKGVYDPNTRITYSNMFDAQMDAVYSAMRALGYSDVPIVVAET  253 (438)
Q Consensus       178 l~fL~~~~d~~~vNiyPff~~~~~----~ld~A~f~~~~~v~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~vvV~ET  253 (438)
                      ++||++++|||++|+||||++..+    +++||+|+++..+.|.+++..|+|+||+|+|++++||+++|+++++|+|+||
T Consensus       153 ~~~L~~~~d~~~vN~yPyf~~~~~~~~~~l~~alf~~~~~~~~~~~~~~y~n~~d~~~d~~~~A~~~~~~~~k~ivI~ET  232 (306)
T d1ghsa_         153 ARLLASTGAPLLANVYPYFAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSES  232 (306)
T ss_dssp             HHHHHHHTCCEEEECCHHHHHHHCTTTSCHHHHHTCTTCCEECTTTCCEECCHHHHHHHHHHHHHHHHTCTTCCEEEEEE
T ss_pred             HHHHHhcCCceEeecchhhhhcCCccccccchhhcCCCCceecCchHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEccc
Confidence            999999999999999999998655    8999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEccCCCCCCCCCCCcceecccCCCCeeeeeec
Q 038452          254 GWPSAGDPRESSATVDNAASFNWNLIQKVNSGKGTPLMPNKQFETYIFALFNENKKPGATSERNFGLFKQDFTPVYDAGV  333 (438)
Q Consensus       254 GWPS~G~~~~~~as~~na~~y~~~lv~~~~~~~GTP~rp~~~~~~yiF~lfDE~~K~g~~~E~~wGlf~~d~~~ky~l~~  333 (438)
                      ||||+|+.   .||++||++|++++++|++  .|||+||+ ++++||||||||+||+|+++|||||||++||+|||+|+|
T Consensus       233 GWPS~G~~---~as~~na~~y~~~l~~~~~--~gt~~r~~-~i~~f~FeaFDE~wK~~~~~E~~wGlf~~d~~~ky~~~f  306 (306)
T d1ghsa_         233 GWPSAGGF---AASAGNARTYNQGLINHVG--GGTPKKRE-ALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQF  306 (306)
T ss_dssp             CCCSSSST---TCCHHHHHHHHHHHHTTGG--GCCSSCCS-CCCEEEECSBCCTTCCSSGGGGGCCSBCTTSCBSSCCCC
T ss_pred             ccccCCCC---CCCHHHHHHHHHHHHHHHh--cCCCCCCC-CceEEEEeeeCcCCCCCCCccCccccCCCCCCEecCCCC
Confidence            99999975   4999999999999999995  49999997 799999999999999877899999999999999999976
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure