Citrus Sinensis ID: 038523

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-
MRMTSLATLGFLLLCCMAFAIHASDPGYMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDAIIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENADGAALPLPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPSMDYVKASNVSYAIVVVGEQPYAETQGDSLNLTISEPGPSTITNVCAAVKCVVVLVSGRPVTVGPYLPQVDALVAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNFGDEQYDPLFPLGFGLTTEPVGSS
cccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHccHHHHHHHHcccccccccHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccEEEEEccccccccccccccccccccccHHHHHHHHcHHHHHHHHHcccHHHccccccccccccccHHHHHHHHHccccccEEEEccccccccccccccccHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccccccccccccEEcccccccccccccccHHHHHHHHcccccEEEEcccccHHHHccccccEEEEEEcccccccccccccccccccccHHHHHHHHHcccEEEEEEcccccccccccccHHHHHHHHcccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHHcccccccHHHcccccHHHHHHHHHccccHHHHHHHcEEEEHHHccHHHHHHccccEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccEEEEcccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHcccccEEcccEcccccccccccHHHcccccHHHHHHHHHHHHHHHccccccccccccccccccccEcEEEEEccHHHcHHHccccEEcccHHHHHHHccHHHHHHHHccccEEEEcccEEccEEHHHcHHHHHHHHHcccccccEEEccccccHHHcccccccHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHcccHHHHHHHHHHHHHHcEEEEEccccccccccccccccEEEEEccccccHHHHHccccccccccccccccccEcHHHHHHHHcccccEEEEEccccHHHHHHcccccEEEEEEcccccHHHHcccccccccccHHHHHHHHccccEEEEEEcccccccHHHHHHccEEEEEEccccEcHHHHHHHcccccccccccccEcccHHHcccccccccccccEcccccEccccEEcc
MRMTSLATLGFLLLCCMAFAihasdpgymkfrdpqqplSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYSIGsllsgggsvprlqatpqEWIDMVNDFqkgslssrlgipmiygidavhghnnvykatifphnvglgatrdpdlVRRIGAATALEVRAtginyafapciavcrdprwgrcfesysedPKIVKLMTEIipglqgdipsdlpkgipyvagrDKVAACAKHyvgdggttrginenntvidrhglmsihmpAYNDAIIKGVSTVMVSYSSwnglkmhanRDLVTNFLKGTLKFRGFVisdwqgidrittpehanySYSVLAGVNagidmfmlpfnhtdfIDILTDFVerkivpmsrIDDAVRRILRVKFTmglfekpmadqtFIDQLGSQAHRDLAREAVRKSLVLLkngenadgaalplpkNAARILVAGThannlgyqcggwtiawqglsgnnntvGTTILNGisatvdsdteiifsenpsmdyvkasNVSYAIVVVgeqpyaetqgdslnltisepgpstitNVCAAVKCVVVLVsgrpvtvgpylPQVDALVAAwlpgtegqgvadvlfgdygftgrlprtwfktvdqlpmnfgdeqydplfplgfglttepvgss
MRMTSLATLGFLLLCCMAFAIHASDPGYMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHyvgdggttrgineNNTVIDRHGLMSIHMPAYNDAIIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKivpmsriddaVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNgenadgaalplPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPSMDYVKASNVSYAIVVVGEQPYAETQGDSLNLTISEPGPSTITNVCAAVKCVVVLVSGRPVTVGPYLPQVDALVAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNFGDEQYDPLFPLGFGLTTEPVGSS
MRMTSLATLGFLLLCCMAFAIHASDPGYMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYsigsllsgggsVPRLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDAIIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENADGAALPLPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPSMDYVKASNVSYAIVVVGEQPYAETQGDSLNLTISEPGPSTITNvcaavkcvvvlvSGRPVTVGPYLPQVDALVAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNFGDEQYDPLFPLGFGLTTEPVGSS
*****LATLGFLLLCCMAFAIHASDPGYMKF*****************MTLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDAIIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENADGAALPLPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPSMDYVKASNVSYAIVVVGEQPYAETQGDSLNLTISEPGPSTITNVCAAVKCVVVLVSGRPVTVGPYLPQVDALVAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNFGDEQYDPLFPLGFGLT*******
***TSLATLGFLLLCCMAFAIHASDPG*****DPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDAIIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENADGAALPLPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPSMDYVKASNVSYAIVVVGEQPYAETQGDSLNLTISEPGPSTITNVCAAVKCVVVLVSGRPVTVGPYLPQVDALVAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNFGDEQYDPLFPLGFGLTTE*V***
MRMTSLATLGFLLLCCMAFAIHASDPGYMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDAIIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENADGAALPLPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPSMDYVKASNVSYAIVVVGEQPYAETQGDSLNLTISEPGPSTITNVCAAVKCVVVLVSGRPVTVGPYLPQVDALVAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNFGDEQYDPLFPLGFGLTTEPVGSS
*RMTSLATLGFLLLCCMAFAIHASDPGYMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDAIIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENADGAALPLPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPSMDYVKASNVSYAIVVVGEQPYAETQGDSLNLTISEPGPSTITNVCAAVKCVVVLVSGRPVTVGPYLPQVDALVAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNFGDEQYDPLFPLGFGLTTEPVGSS
iiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRMTSLATLGFLLLCCMAFAIHASDPGYMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDAIIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENADGAALPLPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPSMDYVKASNVSYAIVVVGEQPYAETQGDSLNLTISEPGPSTITNVCAAVKCVVVLVSGRPVTVGPYLPQVDALVAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNFGDEQYDPLFPLGFGLTTEPVGSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query631 2.2.26 [Sep-21-2011]
Q23892 821 Lysosomal beta glucosidas yes no 0.893 0.686 0.321 1e-73
Q56078 765 Periplasmic beta-glucosid yes no 0.914 0.754 0.296 5e-63
P33363 765 Periplasmic beta-glucosid N/A no 0.908 0.749 0.293 5e-60
Q5BCC6618 Beta-glucosidase C OS=Eme yes no 0.866 0.885 0.253 1e-40
P14002 755 Thermostable beta-glucosi yes no 0.754 0.630 0.290 3e-40
A5JTQ3 774 Beta-xylosidase/alpha-L-a N/A no 0.814 0.664 0.265 2e-38
B8NGU6634 Probable beta-glucosidase N/A no 0.839 0.835 0.254 3e-38
Q9FLG1 784 Beta-D-xylosidase 4 OS=Ar no no 0.797 0.641 0.263 3e-38
Q2UFP8638 Probable beta-glucosidase no no 0.849 0.840 0.258 5e-38
Q9LXD6 773 Beta-D-xylosidase 3 OS=Ar no no 0.803 0.655 0.269 4e-36
>sp|Q23892|GLUA_DICDI Lysosomal beta glucosidase OS=Dictyostelium discoideum GN=gluA PE=1 SV=2 Back     alignment and function desciption
 Score =  278 bits (710), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 205/638 (32%), Positives = 324/638 (50%), Gaps = 74/638 (11%)

Query: 42  IRDLMNRMTLEEKIGQMVQLDRAAAT------------AEIMRDYSIGSLL----SGG-- 83
           + +LM++M++ EKIGQM QLD    T            A   + Y IGS L    SGG  
Sbjct: 80  VDNLMSKMSITEKIGQMTQLDITTLTSPNTITINETTLAYYAKTYYIGSYLNSPVSGGLA 139

Query: 84  GSVPRLQATPQEWIDMVNDFQKGSLS-SRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLG 142
           G +  + ++   W+DM+N  Q   +  S   IPMIYG+D+VHG N V+KAT+FPHN GL 
Sbjct: 140 GDIHHINSS--VWLDMINTIQTIVIEGSPNKIPMIYGLDSVHGANYVHKATLFPHNTGLA 197

Query: 143 ATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLM-TE 201
           AT + +        T+ +  A GI + FAP + +   P W R +E++ EDP +  +M   
Sbjct: 198 ATFNIEHATTAAQITSKDTVAVGIPWVFAPVLGIGVQPLWSRIYETFGEDPYVASMMGAA 257

Query: 202 IIPGLQG-----DIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGL 256
            + G QG     D P + P  +            AKHY G    T G +     I    L
Sbjct: 258 AVRGFQGGNNSFDGPINAPSAV----------CTAKHYFGYSDPTSGKDRTAAWIPERML 307

Query: 257 MSIHMPAYNDAII-KGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGI 315
               +P++ +AI   G  T+M++    NG+ MH +   +T  L+G L+F G  ++DWQ I
Sbjct: 308 RRYFLPSFAEAITGAGAGTIMINSGEVNGVPMHTSYKYLTEVLRGELQFEGVAVTDWQDI 367

Query: 316 DRITTPEHANYS--YSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRIDDAVR 373
           +++    H   S   ++L  ++AGIDM M+P + + F  IL + V    VP SR+D +VR
Sbjct: 368 EKLVYFHHTAGSAEEAILQALDAGIDMSMVPLDLS-FPIILAEMVAAGTVPESRLDLSVR 426

Query: 374 RILRVKFTMGLFEKPM--ADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENADGAALPL 431
           RIL +K+ +GLF  P    +   +D +G    R+ A     +S+ LL+N  N     LPL
Sbjct: 427 RILNLKYALGLFSNPYPNPNAAIVDTIGQVQDREAAAATAEESITLLQNKNN----ILPL 482

Query: 432 PKNAAR-ILVAGTHANNLGYQCGGWTIAWQGLSGNNN-TVGTTILNGISATVD--SDTEI 487
             N  + +L+ G  A+++    GGW++ WQG   ++    GT+IL G+    +  +D  I
Sbjct: 483 NTNTIKNVLLTGPSADSIRNLNGGWSVHWQGAYEDSEFPFGTSILTGLREITNDTADFNI 542

Query: 488 IF-------------SENPSMDYVKASNVSYAIVVVGEQPYAETQGDSLNLTISEPGPST 534
            +             S + +++  ++S+V   +VV+GE P AET GD  +L++       
Sbjct: 543 QYTIGHEIGVPTNQTSIDEAVELAQSSDV--VVVVIGELPEAETPGDIYDLSMDPNEVLL 600

Query: 535 ITNVCAAVKCVV-VLVSGRPVTVGPYLP-QVDALVAAWLPGTE-GQGVADVLFGDYGFTG 591
           +  +    K VV +LV  RP  + P L     A++ A+LPG+E G+ +A++L G+   +G
Sbjct: 601 LQQLVDTGKPVVLILVEARPRILPPDLVYSCAAVLMAYLPGSEGGKPIANILMGNVNPSG 660

Query: 592 RLPRTWFKTVDQLPMNFGDEQYD-----PLFPLGFGLT 624
           RLP T+  T   + + +  +  +     PLF  G GL+
Sbjct: 661 RLPLTYPGTTGDIGVPYYHKYSENGVTTPLFQFGDGLS 698

Dictyostelium discoideum (taxid: 44689)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 1
>sp|Q56078|BGLX_SALTY Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=bglX PE=3 SV=2 Back     alignment and function description
>sp|P33363|BGLX_ECOLI Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) GN=bglX PE=1 SV=2 Back     alignment and function description
>sp|Q5BCC6|BGLC_EMENI Beta-glucosidase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bglC PE=1 SV=1 Back     alignment and function description
>sp|P14002|BGLB_CLOTH Thermostable beta-glucosidase B OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=bglB PE=1 SV=2 Back     alignment and function description
>sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 Back     alignment and function description
>sp|B8NGU6|BGLC_ASPFN Probable beta-glucosidase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=bglC PE=3 SV=1 Back     alignment and function description
>sp|Q9FLG1|BXL4_ARATH Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1 Back     alignment and function description
>sp|Q2UFP8|BGLC_ASPOR Probable beta-glucosidase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=bglC PE=3 SV=2 Back     alignment and function description
>sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query631
255565897625 hydrolase, hydrolyzing O-glycosyl compou 0.982 0.992 0.789 0.0
225465605629 PREDICTED: lysosomal beta glucosidase-li 0.995 0.998 0.773 0.0
225465603629 PREDICTED: lysosomal beta glucosidase-li 0.995 0.998 0.768 0.0
225439287627 PREDICTED: lysosomal beta glucosidase-li 0.988 0.995 0.751 0.0
147839124607 hypothetical protein VITISV_027177 [Viti 0.949 0.986 0.774 0.0
356565758628 PREDICTED: lysosomal beta glucosidase-li 0.988 0.993 0.733 0.0
449446738628 PREDICTED: lysosomal beta glucosidase-li 0.980 0.985 0.730 0.0
296089304635 unnamed protein product [Vitis vinifera] 0.988 0.982 0.741 0.0
225423533627 PREDICTED: lysosomal beta glucosidase [V 0.950 0.956 0.765 0.0
118486349626 unknown [Populus trichocarpa] 0.985 0.993 0.725 0.0
>gi|255565897|ref|XP_002523937.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] gi|223536784|gb|EEF38424.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1016 bits (2628), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/628 (78%), Positives = 549/628 (87%), Gaps = 8/628 (1%)

Query: 1   MRMTSLATLG-FLLLCCMAFAIHASDPGYMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMV 59
           M   S+  LG FL+LCC A    A+D  Y+K++DP QPL+ RIRD+M RMTL EKIGQMV
Sbjct: 1   MARISIPLLGLFLVLCCFA----AADAEYLKYKDPSQPLNVRIRDVMKRMTLAEKIGQMV 56

Query: 60  QLDRAAATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGSLSSRLGIPMIYG 119
           QLDR+  T EIMRDYSIGS+LSGGGSVP+ QATPQEWIDMVN FQ GSLSSRLGIPMIYG
Sbjct: 57  QLDRSVVTPEIMRDYSIGSILSGGGSVPKEQATPQEWIDMVNSFQNGSLSSRLGIPMIYG 116

Query: 120 IDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRD 179
           IDAVHGHNNVYKAT+FPHNVGLGATRDP+LV+RIGAATALEVRATGINY FAPCIAVCRD
Sbjct: 117 IDAVHGHNNVYKATLFPHNVGLGATRDPELVKRIGAATALEVRATGINYVFAPCIAVCRD 176

Query: 180 PRWGRCFESYSEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGG 239
           PRWGRCFESYSE+P +VK MTEIIPGLQGD P+   KG+PYV G DKVAACAKH+VGDGG
Sbjct: 177 PRWGRCFESYSENPSVVKSMTEIIPGLQGDSPN---KGVPYVGGNDKVAACAKHFVGDGG 233

Query: 240 TTRGINENNTVIDRHGLMSIHMPAYNDAIIKGVSTVMVSYSSWNGLKMHANRDLVTNFLK 299
           TT+GINENNTVID HGL+SIHMP Y  ++IKGVSTVMVSYSSWNG+KMHANRDLVT FLK
Sbjct: 234 TTKGINENNTVIDYHGLLSIHMPGYLHSVIKGVSTVMVSYSSWNGIKMHANRDLVTGFLK 293

Query: 300 GTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNHTDFIDILTDFVE 359
            TL FRGFVISDWQGIDRIT+P HANYSYSVL GV+AGIDM M+PFNHTDFIDILT FV+
Sbjct: 294 ETLNFRGFVISDWQGIDRITSPAHANYSYSVLKGVSAGIDMVMVPFNHTDFIDILTGFVK 353

Query: 360 RKIVPMSRIDDAVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKSLVLLK 419
             ++PMSRI+DAVRRILRVKF MGLFE  +ADQ+F+  LGSQAHRDLAREAVRKSLVLLK
Sbjct: 354 NNVIPMSRINDAVRRILRVKFAMGLFENSLADQSFVHHLGSQAHRDLAREAVRKSLVLLK 413

Query: 420 NGENADGAALPLPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISA 479
           NG+NAD   LPL K A RILVAGTHANNLGYQCGGWT+ WQGL GNNNTVGTTILN IS 
Sbjct: 414 NGQNADTPLLPLSKKAGRILVAGTHANNLGYQCGGWTLTWQGLGGNNNTVGTTILNAIST 473

Query: 480 TVDSDTEIIFSENPSMDYVKASNVSYAIVVVGEQPYAETQGDSLNLTISEPGPSTITNVC 539
            VD+ TEI++SE+P  D+VKA+N SYAIVVVGE PYAET GD LNLTI+EPGP+ ITNVC
Sbjct: 474 AVDTSTEIVYSEDPDADFVKANNFSYAIVVVGELPYAETFGDRLNLTIAEPGPTVITNVC 533

Query: 540 AAVKCVVVLVSGRPVTVGPYLPQVDALVAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFK 599
            +VKCVVV+VSGRP+ + P++  +DALVAAWLPG+EGQGVADVLFGDYGFTG+LPRTWFK
Sbjct: 534 GSVKCVVVVVSGRPLVIEPHISPIDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFK 593

Query: 600 TVDQLPMNFGDEQYDPLFPLGFGLTTEP 627
            VDQLPMN GD  YDPLFP GFGLTTEP
Sbjct: 594 YVDQLPMNVGDAHYDPLFPYGFGLTTEP 621

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225465605|ref|XP_002266675.1| PREDICTED: lysosomal beta glucosidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225465603|ref|XP_002266589.1| PREDICTED: lysosomal beta glucosidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225439287|ref|XP_002266470.1| PREDICTED: lysosomal beta glucosidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147839124|emb|CAN63654.1| hypothetical protein VITISV_027177 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356565758|ref|XP_003551104.1| PREDICTED: lysosomal beta glucosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|449446738|ref|XP_004141128.1| PREDICTED: lysosomal beta glucosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296089304|emb|CBI39076.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225423533|ref|XP_002271545.1| PREDICTED: lysosomal beta glucosidase [Vitis vinifera] Back     alignment and taxonomy information
>gi|118486349|gb|ABK95015.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query631
TAIR|locus:2147117624 AT5G20950 [Arabidopsis thalian 0.973 0.983 0.676 7.9e-236
TAIR|locus:504954860665 AT5G04885 [Arabidopsis thalian 0.995 0.944 0.644 1.1e-229
TAIR|locus:2147102626 AT5G20940 [Arabidopsis thalian 0.979 0.987 0.672 3.5e-226
TAIR|locus:2075621608 AT3G47000 [Arabidopsis thalian 0.946 0.981 0.551 2.6e-182
TAIR|locus:2075636609 AT3G47010 [Arabidopsis thalian 0.941 0.975 0.539 8.6e-175
TAIR|locus:2075571612 AT3G47050 [Arabidopsis thalian 0.957 0.986 0.532 1.2e-170
TAIR|locus:2081605650 AT3G62710 [Arabidopsis thalian 0.803 0.78 0.525 2.8e-144
TIGR_CMR|CPS_3740599 CPS_3740 "putative endoglucana 0.877 0.924 0.379 2e-88
TIGR_CMR|CPS_3725605 CPS_3725 "glycosyl hydrolase, 0.602 0.628 0.433 4.6e-73
DICTYBASE|DDB_G0292810 821 gluA "beta glucosidase" [Dicty 0.773 0.594 0.331 3.3e-69
TAIR|locus:2147117 AT5G20950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2274 (805.5 bits), Expect = 7.9e-236, P = 7.9e-236
 Identities = 419/619 (67%), Positives = 505/619 (81%)

Query:     9 LGFLLLCCMAFAIHASDPGYMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATA 68
             L  +LLCC+     A+  G +K++DP+QPL  RIRDLMNRMTL+EKIGQMVQ++R+ AT 
Sbjct:     8 LCLMLLCCIV----AAAEGTLKYKDPKQPLGARIRDLMNRMTLQEKIGQMVQIERSVATP 63

Query:    69 EIMRDYXXXXXXXXXXXVPRLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNN 128
             E+M+ Y           VP  +ATP+ W++MVN+ QK SLS+RLGIPMIYGIDAVHGHNN
Sbjct:    64 EVMKKYFIGSVLSGGGSVPSEKATPETWVNMVNEIQKASLSTRLGIPMIYGIDAVHGHNN 123

Query:   129 VYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFES 188
             VY ATIFPHNVGLG TRDP+LV+RIGAATALEVRATGI YAFAPCIAVCRDPRWGRC+ES
Sbjct:   124 VYGATIFPHNVGLGVTRDPNLVKRIGAATALEVRATGIPYAFAPCIAVCRDPRWGRCYES 183

Query:   189 YSEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENN 248
             YSED +IV+ MTEIIPGLQGD+P+   KG+P+V G+ KVAACAKH+VGDGGT RGI+ENN
Sbjct:   184 YSEDYRIVQQMTEIIPGLQGDLPTKR-KGVPFVGGKTKVAACAKHFVGDGGTVRGIDENN 242

Query:   249 TVIDRHGLMSIHMPAYNDAIIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFV 308
             TVID  GL  IHMP Y +A+ KGV+T+MVSYS+WNGL+MHAN++LVT FLK  LKFRGFV
Sbjct:   243 TVIDSKGLFGIHMPGYYNAVNKGVATIMVSYSAWNGLRMHANKELVTGFLKNKLKFRGFV 302

Query:   309 ISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRI 368
             ISDWQGIDRITTP H NYSYSV AG++AGIDM M+P+N+T+FID ++  +++K++P+SRI
Sbjct:   303 ISDWQGIDRITTPPHLNYSYSVYAGISAGIDMIMVPYNYTEFIDEISSQIQKKLIPISRI 362

Query:   369 DDAVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENADGAA 428
             DDA++RILRVKFTMGLFE+P+AD +F +QLGS+ HR+LAREAVRKSLVLLKNG+      
Sbjct:   363 DDALKRILRVKFTMGLFEEPLADLSFANQLGSKEHRELAREAVRKSLVLLKNGKTGAKPL 422

Query:   429 LPLPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEII 488
             LPLPK + +ILVAG HA+NLGYQCGGWTI WQGL+GN++TVGTTIL  +  TV   T+++
Sbjct:   423 LPLPKKSGKILVAGAHADNLGYQCGGWTITWQGLNGNDHTVGTTILAAVKNTVAPTTQVV 482

Query:   489 FSENPSMDYVKASNVSYAIVVVGEQPYAETQGDSLNLTISEPGPSTITNXXXXXXXXXXX 548
             +S+NP  ++VK+    YAIVVVGE PYAE  GD+ NLTIS+PGPS I N           
Sbjct:   483 YSQNPDANFVKSGKFDYAIVVVGEPPYAEMFGDTTNLTISDPGPSIIGNVCGSVKCVVVV 542

Query:   549 XSGRPVTVGPYLPQVDALVAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNF 608
              SGRPV + PY+  +DALVAAWLPGTEGQGVAD LFGDYGFTG+L RTWFK+V QLPMN 
Sbjct:   543 VSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQLPMNV 602

Query:   609 GDEQYDPLFPLGFGLTTEP 627
             GD  YDPL+P GFGLTT+P
Sbjct:   603 GDRHYDPLYPFGFGLTTKP 621
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
TAIR|locus:504954860 AT5G04885 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2147102 AT5G20940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075621 AT3G47000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075636 AT3G47010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075571 AT3G47050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081605 AT3G62710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3740 CPS_3740 "putative endoglucanase A" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3725 CPS_3725 "glycosyl hydrolase, family 3" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0292810 gluA "beta glucosidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.21LOW CONFIDENCE prediction!
3rd Layer3.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00017476001
SubName- Full=Chromosome chr6 scaffold_15, whole genome shotgun sequence; (626 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query631
pfam00933296 pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil 2e-91
COG1472397 COG1472, BglX, Beta-glucosidase-related glycosidas 3e-90
PRK15098 765 PRK15098, PRK15098, beta-D-glucoside glucohydrolas 4e-86
pfam01915221 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam 2e-51
PLN03080 779 PLN03080, PLN03080, Probable beta-xylosidase; Prov 3e-45
>gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain Back     alignment and domain information 
 Score =  284 bits (728), Expect = 2e-91
 Identities = 114/333 (34%), Positives = 161/333 (48%), Gaps = 41/333 (12%)

Query: 50  TLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGSLS 109
           TLEEKIGQ+   +  A        Y +G ++             ++  D++N   + +  
Sbjct: 1   TLEEKIGQLTAAELIA-------KYGVGGVIL-----------WKQLEDLINCAGQAAGV 42

Query: 110 SRLGIPMIYGIDAVHGHNNVY--KATIFPHNVGLGATRDPDLVRRIGAATALEVRATGIN 167
            RLGIP++ G D  HG         T FP  + L AT D DL   +G A   E RA GI+
Sbjct: 43  PRLGIPLLCGTDGPHGVRQRDGAGFTAFPAGIALAATWDRDLAYEVGVAIGEEARAKGID 102

Query: 168 YAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMT-EIIPGLQGDIPSDLPKGIPYVAGRDK 226
              AP + V RDPRWGR FES+SEDP +   M    I G+Q                   
Sbjct: 103 VILAPVVDVGRDPRWGRNFESFSEDPYLAGAMAAAYIKGIQS----------------QG 146

Query: 227 VAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDAIIK-GVSTVMVSYSSWNGL 285
           V A AKH+ G           ++ ID   L  I++P +  A+ + GV +VM +Y+  NG 
Sbjct: 147 VIATAKHFAGHNEQESHRETPDSDIDERTLREIYLPPFEAAVKEAGVGSVMCAYNKVNGS 206

Query: 286 KMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPF 345
               N  L+T  L+    F GFV+SDW G++ I    H   + S +A +NAG+DM M   
Sbjct: 207 PACGNSYLLTGLLREEWGFDGFVVSDWLGMNGIAD--HGGAAESAVAALNAGLDMEMPG- 263

Query: 346 NHTDFIDILTDFVERKIVPMSRIDDAVRRILRV 378
            +    + LT+ V+   VP  R+DD+VRRILR+
Sbjct: 264 EYRTVGEALTEAVKNGKVPEERLDDSVRRILRL 296

Length = 296
>gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain Back     alignment and domain information
>gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 631
PRK15098 765 beta-D-glucoside glucohydrolase; Provisional 100.0
PLN03080 779 Probable beta-xylosidase; Provisional 100.0
COG1472397 BglX Beta-glucosidase-related glycosidases [Carboh 100.0
PF00933299 Glyco_hydro_3: Glycosyl hydrolase family 3 N termi 100.0
PRK05337337 beta-hexosaminidase; Provisional 100.0
PF01915227 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-ter 100.0
>PRK15098 beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.4e-117  Score=1020.29  Aligned_cols=555  Identities=32%  Similarity=0.560  Sum_probs=472.7

Q ss_pred             CCHHHHHHHHHhhCCHHHHHhcccccccch-----hhHHHHHhcCcceEeeCCCCCCCCCCCHHHHHHHHHHHHhhhc-c
Q 038523           36 QPLSKRIRDLMNRMTLEEKIGQMVQLDRAA-----ATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGSL-S  109 (631)
Q Consensus        36 ~~~~~rv~~ll~~mtleeKigQl~~~~~~~-----~~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~-~  109 (631)
                      .+.++|+++++++||+|||||||+++.+..     ...+.|+++++|||+.        ..+++++    +.+|+.+. .
T Consensus        32 ~~~~~~v~~ll~~MtleEKvgQl~~~~~~~~~~~~~~~~~i~~~~vGgv~n--------~~~~~~~----~~lq~~~~~~   99 (765)
T PRK15098         32 EARDAFVTDLLKKMTLDEKIGQLRLISVGPDNPKEAIREMIKAGQVGAIFN--------TVTRQDI----RAMQDQVMQL   99 (765)
T ss_pred             cCHHHHHHHHHHcCCHHHHHhhhcccccCCCCchHHHHHHHHhCCcceEEc--------CcCHHHH----HHHHHHHhhC
Confidence            478999999999999999999999875433     2356789999999972        2244444    45666554 4


Q ss_pred             CCCCCCcEEeecCCCCcccCCCccCCCccccccCCCCHHHHHHHHHHHHHHHHHcCCCeeeecccccccCCCCCcccccc
Q 038523          110 SRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESY  189 (631)
Q Consensus       110 ~~lgiP~~~~~D~egG~~~~~~~t~fP~~~~l~at~d~~la~~~g~~~g~el~a~Gin~~~aPvvDv~~~p~~gr~~rsf  189 (631)
                      ++++||+++++|+|||.     .|.||+++++|||||+++++++|+++|+|+|++|||++||||+||+|||+|||++|||
T Consensus       100 ~~~giP~li~~D~e~G~-----~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~Gin~~laPv~Dv~r~p~~gr~~rsf  174 (765)
T PRK15098        100 SRLKIPLFFAYDVVHGQ-----RTVFPISLGLASSWDLDAVATVGRVSAYEAADDGLNMTWAPMVDISRDPRWGRASEGF  174 (765)
T ss_pred             CCCCCCeeEEEeCCCCc-----cccCChHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCEEeeCcccccCCCCccccccCc
Confidence            78899999999999996     4789999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHh-hhccccCCCCCCCCCCCcccCCCCceeEeecccccCCCCCCCCCCCCcccCHhHHHhhccHHHHHHH
Q 038523          190 SEDPKIVKLMTE-IIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDAI  268 (631)
Q Consensus       190 geDp~lv~~~a~-~v~G~q~~~~~~~~~g~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i  268 (631)
                      ||||++|++|+. ||+|+|+.+..          +..||++|+|||||||.++.++|.....+++++|++.||+||+++|
T Consensus       175 geDP~lv~~~~~a~v~GlQ~~~~~----------~~~gV~a~~KHFpG~g~~~~~~~~~~~~~~~~~l~e~~l~PF~~ai  244 (765)
T PRK15098        175 GEDTYLTSIMGKTMVKAMQGKSPA----------DRYSVMTSVKHFALYGAVEGGRDYNTVDMSPQRMFNDYLPPYKAGL  244 (765)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCCC----------CCCCEEEECcEEeCCCCcccCccCccCcCCHHHHHHHHHHHHHHHH
Confidence            999999999998 99999963210          0358999999999999988888877777899999999999999999


Q ss_pred             HhCCceEEEeccccCCccccCCHHHHHHHHHhhcCCCcEEeCchhhhhhhccCC-CCChHHHHHHHHHcCCceecCCCCh
Q 038523          269 IKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPE-HANYSYSVLAGVNAGIDMFMLPFNH  347 (631)
Q Consensus       269 ~ag~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~lgf~G~viSD~~~m~~~~~~~-~~~~~~~~~~al~AG~D~~l~~~~~  347 (631)
                      ++|+.+|||||+.+||.|+|+|+++|+++||+||||+|+|||||++|.++..++ ..+..+++++|++||+||+|.+.. 
T Consensus       245 ~ag~~~VM~sy~~~~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~a~~~l~~~~~~~~~~ea~~~Al~AG~Dl~m~~~~-  323 (765)
T PRK15098        245 DAGSGGVMVALNSLNGTPATSDSWLLKDLLRDQWGFKGITVSDHGAIKELIKHGVAADPEDAVRLALKSGIDMSMSDEY-  323 (765)
T ss_pred             HhCCCEEEecccCcCCEeccCCHHHHHHHHHHhcCCCcEEEecchhHHHHHhcccCCCHHHHHHHHHHcCCCcccCchh-
Confidence            999999999999999999999999999999999999999999999999886421 124578899999999999986432 


Q ss_pred             HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCchh------hhhhcCChHHHHHHHHHHHhhhhhhccC
Q 038523          348 TDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEKPMADQT------FIDQLGSQAHRDLAREAVRKSLVLLKNG  421 (631)
Q Consensus       348 ~~~~~~l~~av~~g~i~~~~ld~av~Ril~~k~~~Gl~~~p~~~~~------~~~~~~~~~~~~~a~~~a~~sivLLKN~  421 (631)
                        +.+.|.++|++|.+++++||+||+|||++|+++|+|++|+.+..      ....+.+++|+++++++|++||||||| 
T Consensus       324 --~~~~l~~av~~G~i~~~~id~av~RIL~~k~~~glf~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~sivLLKN-  400 (765)
T PRK15098        324 --YSKYLPGLVKSGKVTMAELDDAVRHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKN-  400 (765)
T ss_pred             --HHHHHHHHHHcCcCCHHHHHHHHHHHHHHHHHhCCCCCCccccccccccccccccCCHHHHHHHHHHHHhcEEEEec-
Confidence              33568999999999999999999999999999999999986431      112346789999999999999999999 


Q ss_pred             CCCCCCccCCCCCCceEEEEccCCCccccccCCceeecccCCCCCCCccCCHHHHHHhccCCCceEEEcCCCc-------
Q 038523          422 ENADGAALPLPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPS-------  494 (631)
Q Consensus       422 ~~~~~~~LPL~~~~~ki~vig~~a~~~~~~~g~~~~~~~~~~g~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~-------  494 (631)
                         ++++|||+++ +||+||||+++....++|+|+..     +. .....|++++|++.+.....+.|..+.+       
T Consensus       401 ---~~~~LPL~~~-~~IaviG~~a~~~~~~~G~~s~~-----~~-~~~~vt~~~gl~~~~~~~~~v~y~~G~~~~~~~~~  470 (765)
T PRK15098        401 ---RLETLPLKKS-GTIAVVGPLADSQRDVMGSWSAA-----GV-ADQSVTVLQGIKNAVGDKAKVLYAKGANVTDDKGI  470 (765)
T ss_pred             ---CCCCCCCCCC-CEEEEECCCcccccccCCCcccc-----Cc-cCCCCCHHHHHHHhhcCCceEEEecccccccCccc
Confidence               7789999865 79999999998876678887532     11 2356799999998775444565543321       


Q ss_pred             ------------------H-----HHHHhcCCCeEEEEEeCCCCCcccC-CCCcccCCCCcHHHHHHHhc-CCCeEEEEE
Q 038523          495 ------------------M-----DYVKASNVSYAIVVVGEQPYAETQG-DSLNLTISEPGPSTITNVCA-AVKCVVVLV  549 (631)
Q Consensus       495 ------------------~-----~~~~~~~~d~~iv~vg~~~~~~~~g-d~~~l~lp~~q~~li~~v~~-~~~~VvV~~  549 (631)
                                        .     ....++.+|++||++|.....+.++ ||.++.||..|.+||+++++ ++|+|||++
T Consensus       471 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~A~~aD~vIv~vg~~~~~~~E~~Dr~~l~Lp~~Q~~Li~~v~~~~~~vVvVl~  550 (765)
T PRK15098        471 IDFLNQYEEAVKVDPRSPQAMIDEAVQAAKQADVVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLM  550 (765)
T ss_pred             chhhhccccccccccccchhhHHHHHHHHhcCCEEEEEEcCCCCccccCCCcccccCCHHHHHHHHHHHHhCcCEEEEEe
Confidence                              0     1123578999999999887666665 99999999999999999987 889999999


Q ss_pred             CCCccccCCCCCCcceEEEccCCChh-hHHHHHHhccCCCCCCcccccccccCCCCCCCC-----------------CCC
Q 038523          550 SGRPVTVGPYLPQVDALVAAWLPGTE-GQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNF-----------------GDE  611 (631)
Q Consensus       550 ~g~P~~l~~~~~~v~Ail~a~~~g~~-g~a~advL~G~~nPsGkLPvt~p~~~~~~p~~~-----------------g~~  611 (631)
                      +|+||+|.++.++++|||++|+||++ |+|+||||||++|||||||+|||++.+++|.++                 +||
T Consensus       551 ~g~P~~l~~~~~~v~AiL~a~~pG~e~G~AiAdvLfG~~nPsGkLPvT~p~~~~~~P~~~~~~~~~~~y~e~~~~~y~yr  630 (765)
T PRK15098        551 NGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYNHLNTGRPYNPDKPNKYTSR  630 (765)
T ss_pred             CCceeeccchhhcCCeEEeecCCchhhhHHHHHHHcCCCCCCCCCccceeCCCCcCccccccCCCCCccccCcccccccc
Confidence            99999994333599999999999999 999999999999999999999999999998643                 346


Q ss_pred             CC----CccccCCCCCCCCCCCCC
Q 038523          612 QY----DPLFPLGFGLTTEPVGSS  631 (631)
Q Consensus       612 ~~----~plfpFG~GLSYt~~~~~  631 (631)
                      ||    +|+||||||||||+|.-|
T Consensus       631 y~d~~~~plypFG~GLSYT~F~ys  654 (765)
T PRK15098        631 YFDEANGPLYPFGYGLSYTTFTVS  654 (765)
T ss_pred             eeccCCCccccccCCCCCccEEee
Confidence            66    599999999999999743

>PLN03080 Probable beta-xylosidase; Provisional Back     alignment and domain information
>COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK05337 beta-hexosaminidase; Provisional Back     alignment and domain information
>PF01915 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-terminal domain; InterPro: IPR002772 Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query631
1ex1_A605 Beta-D-Glucan Exohydrolase From Barley Length = 605 0.0
1lq2_A602 Crystal Structure Of Barley Beta-D-Glucan Glucohydr 0.0
3usz_A 822 Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc 1e-125
3rrx_A 822 Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet 1e-125
2x40_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 1e-24
2x42_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 1e-23
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 2e-20
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 8e-05
4i8d_A 714 Crystal Structure Of Beta-D-Glucoside Glucohydrolas 2e-20
3zyz_A 713 Crystal Structure Of A Glycoside Hydrolase Family 3 2e-20
3bmx_A642 Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis 3e-20
4gyj_A648 Crystal Structure Of Mutant (D318n) Bacillus Subtil 8e-20
3lk6_A616 Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) Fro 2e-19
4i3g_A 829 Crystal Structure Of Desr, A Beta-glucosidase From 2e-19
3abz_A 845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 3e-18
3abz_A 845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 1e-04
3sql_A535 Crystal Structure Of Glycoside Hydrolase From Synec 3e-08
>pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 Back     alignment and structure 
Iteration: 1

 Score =  840 bits (2171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/599 (67%), Positives = 469/599 (78%), Gaps = 2/599 (0%)
Query: 28  YMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYXXXXXXXXXXXVP 87
           Y+ ++D  +P+  R+ DL+ RMTL EKIGQM Q++R  AT +++RD            VP
Sbjct: 2   YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVP 61
Query: 88  RLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDP 147
           R  AT +EW DMV+ FQK  +S+RLGIPMIYGIDAVHG NNVY ATIFPHNVGLGATRDP
Sbjct: 62  RKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDP 121
Query: 148 DLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMTEIIPGLQ 207
            LV+RIG ATALEVRATGI YAFAPCIAVCRDPRWGRC+ESYSED +IV+ MTE+IPGLQ
Sbjct: 122 YLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGLQ 181
Query: 208 GDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDA 267
           GD+P D   G+P+VAG++KVAACAKH+VGDGGT  GINENNT+I+R GLM+IHMPAY +A
Sbjct: 182 GDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNA 241
Query: 268 IIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYS 327
           + KGVSTVM+SYSSWNG+KMHAN+DLVT +LK TLKF+GFVISDW+GIDRITTP  ++YS
Sbjct: 242 MDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYS 301
Query: 328 YSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEK 387
           YSV A + AG+DM M+P  +  FI ILT  V   ++PMSRIDDAV RILRVKFTMGLFE 
Sbjct: 302 YSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFEN 361
Query: 388 PMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENA-DGAALPLPKNAARILVAGTHAN 446
           P AD    +QLG Q HRDLAREA RKSLVLLKNG+ + D   LPLPK A +ILVAG+HA+
Sbjct: 362 PYADPAMAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKKAPKILVAGSHAD 421
Query: 447 NLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPSMDYVKASNVSYA 506
           NLGYQCGGWTI WQG +G   TVGTTIL  + A VD  T ++F+ENP  ++VK+   SYA
Sbjct: 422 NLGYQCGGWTIEWQGDTG-RTTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGGFSYA 480
Query: 507 IVVVGEQPYAETQGDSLNLTISEPGPSTITNXXXXXXXXXXXXSGRPVTVGPYLPQVDAL 566
           IV VGE PY ET+GD+LNLTI EPG ST+              SGRPV V P L   DAL
Sbjct: 481 IVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCATVLISGRPVVVQPLLAASDAL 540
Query: 567 VAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNFGDEQYDPLFPLGFGLTT 625
           VAAWLPG+EGQGV D LFGD+GFTGRLPRTWFK+VDQLPMN GD  YDPLF LG+GLTT
Sbjct: 541 VAAWLPGSEGQGVTDALFGDFGFTGRLPRTWFKSVDQLPMNVGDAHYDPLFRLGYGLTT 599
>pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 Back     alignment and structure
>pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 Back     alignment and structure
>pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 Back     alignment and structure
>pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 Back     alignment and structure
>pdb|3BMX|A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis Length = 642 Back     alignment and structure
>pdb|4GYJ|A Chain A, Crystal Structure Of Mutant (D318n) Bacillus Subtilus Family 3 Glycoside Hydrolase (Nagz) In Complex With Glcnac-Murnac (Space Group P1) Length = 648 Back     alignment and structure
>pdb|3LK6|A Chain A, Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) From Bacillus Subtilis Length = 616 Back     alignment and structure
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|3SQL|A Chain A, Crystal Structure Of Glycoside Hydrolase From Synechococcus Length = 535 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query631
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 0.0
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 0.0
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 1e-135
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 5e-89
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 6e-69
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 6e-21
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 1e-54
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 2e-30
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 1e-16
4g6c_A342 Beta-hexosaminidase 1; ssgcid, niaid, structural g 8e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 Back     alignment and structure
 Score =  903 bits (2335), Expect = 0.0
 Identities = 418/599 (69%), Positives = 487/599 (81%), Gaps = 2/599 (0%)

Query: 28  YMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVP 87
           Y+ ++D  +P+  R+ DL+ RMTL EKIGQM Q++R  AT +++RD  IGSLLSGGGSVP
Sbjct: 2   YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVP 61

Query: 88  RLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDP 147
           R  AT +EW DMV+ FQK  +S+RLGIPMIYGIDAVHG NNVY ATIFPHNVGLGATRDP
Sbjct: 62  RKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDP 121

Query: 148 DLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMTEIIPGLQ 207
            LV+RIG ATALEVRATGI YAFAPCIAVCRDPRWGRC+ESYSED +IV+ MTE+IPGLQ
Sbjct: 122 YLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGLQ 181

Query: 208 GDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDA 267
           GD+P D   G+P+VAG++KVAACAKH+VGDGGT  GINENNT+I+R GLM+IHMPAY +A
Sbjct: 182 GDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNA 241

Query: 268 IIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYS 327
           + KGVSTVM+SYSSWNG+KMHAN+DLVT +LK TLKF+GFVISDW+GIDRITTP  ++YS
Sbjct: 242 MDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYS 301

Query: 328 YSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEK 387
           YSV A + AG+DM M+P  +  FI ILT  V   ++PMSRIDDAV RILRVKFTMGLFE 
Sbjct: 302 YSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFEN 361

Query: 388 PMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENA-DGAALPLPKNAARILVAGTHAN 446
           P AD    +QLG Q HRDLAREA RKSLVLLKNG+ + D   LPLPK A +ILVAG+HA+
Sbjct: 362 PYADPAMAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKKAPKILVAGSHAD 421

Query: 447 NLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPSMDYVKASNVSYA 506
           NLGYQCGGWTI WQG +G   TVGTTIL  + A VD  T ++F+ENP  ++VK+   SYA
Sbjct: 422 NLGYQCGGWTIEWQGDTG-RTTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGGFSYA 480

Query: 507 IVVVGEQPYAETQGDSLNLTISEPGPSTITNVCAAVKCVVVLVSGRPVTVGPYLPQVDAL 566
           IV VGE PY ET+GD+LNLTI EPG ST+  VC  V+C  VL+SGRPV V P L   DAL
Sbjct: 481 IVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCATVLISGRPVVVQPLLAASDAL 540

Query: 567 VAAWLPGTEGQGVADVLFGDYGFTGRLPRTWFKTVDQLPMNFGDEQYDPLFPLGFGLTT 625
           VAAWLPG+EGQGV D LFGD+GFTGRLPRTWFK+VDQLPMN GD  YDPLF LG+GLTT
Sbjct: 541 VAAWLPGSEGQGVTDALFGDFGFTGRLPRTWFKSVDQLPMNVGDAHYDPLFRLGYGLTT 599
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 Back     alignment and structure
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Length = 351 Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Length = 340 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query631
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 100.0
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 100.0
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 100.0
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 100.0
3zyz_A 713 Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1 100.0
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 100.0
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 100.0
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 100.0
4gvf_A349 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: N 100.0
4g6c_A348 Beta-hexosaminidase 1; ssgcid, niaid, structural g 100.0
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 100.0
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Back     alignment and structure
Probab=100.00  E-value=1.4e-133  Score=1132.46  Aligned_cols=593  Identities=70%  Similarity=1.191  Sum_probs=543.0

Q ss_pred             CCCCCCCCHHHHHHHHHhhCCHHHHHhcccccccchhhHHHHHhcCcceEeeCCCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 038523           30 KFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGSLS  109 (631)
Q Consensus        30 ~~~~~~~~~~~rv~~ll~~mtleeKigQl~~~~~~~~~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~  109 (631)
                      ||+||+++.++||++|+++||+|||||||+++.......+.++++++|||+++++..+.+..+++||+++++.+|+.+..
T Consensus         4 ~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~i~~~~vG~vi~~~~~~~~~~~~~~~~~~l~~~lq~~a~~   83 (602)
T 1x38_A            4 LYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKACMS   83 (602)
T ss_dssp             GGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHHHT
T ss_pred             cccCCCCCHHHHHHHHHHcCCHHHHHhhhcccccccccHHHHHhcCCceEEeCCcccccccCCHHHHHHHHHHHHHHhcc
Confidence            89999999999999999999999999999988666566789999999999998877778888999999999999999888


Q ss_pred             CCCCCCcEEeecCCCCcccCCCccCCCccccccCCCCHHHHHHHHHHHHHHHHHcCCCeeeecccccccCCCCCcccccc
Q 038523          110 SRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESY  189 (631)
Q Consensus       110 ~~lgiP~~~~~D~egG~~~~~~~t~fP~~~~l~at~d~~la~~~g~~~g~el~a~Gin~~~aPvvDv~~~p~~gr~~rsf  189 (631)
                      +|+|||+++++|+|||.+.+.++|.||+++++|||||+++++++|+++|+|+|++|||++|||++||+|||+|||++|||
T Consensus        84 ~rlgiP~l~~~D~~~G~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~Gi~~~~aP~vdv~r~p~~GR~~esf  163 (602)
T 1x38_A           84 TRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESY  163 (602)
T ss_dssp             SSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCSCTTSTTGGGSS
T ss_pred             ccCCCCcEEEEcCCCceeCCCCCCCCCCHHHHHhccCHHHHHHHHHHHHHHHHHcCCCEEeeceeccccCCCcCccccCc
Confidence            99999999999999999877789999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHhhhccccCCCCCCCCCCCcccCCCCceeEeecccccCCCCCCCCCCCCcccCHhHHHhhccHHHHHHHH
Q 038523          190 SEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDAII  269 (631)
Q Consensus       190 geDp~lv~~~a~~v~G~q~~~~~~~~~g~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~  269 (631)
                      ||||++|++|+.||+|+|++....+..|.+|+.+..||++|+|||||||+++.|+|.....+++++|++.||+||+++|+
T Consensus       164 geDP~lv~~~a~~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~pF~~ai~  243 (602)
T 1x38_A          164 SEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNAMD  243 (602)
T ss_dssp             CSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhcCCCccccccccccccccCCeEEEeccccCCCccccCcccccCcCCHHHHHHHHHHHHHHHHH
Confidence            99999999997799999974322222222333222499999999999999988888877888999999999999999999


Q ss_pred             hCCceEEEeccccCCccccCCHHHHHHHHHhhcCCCcEEeCchhhhhhhccCCCCChHHHHHHHHHcCCceecCCCChHH
Q 038523          270 KGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNHTD  349 (631)
Q Consensus       270 ag~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~lgf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~  349 (631)
                      +|+.+|||||+.+||+|+|+|+++|+++||+||||+|+|||||++|.++...++.++.+++++|++||+||+|+|.++..
T Consensus       244 ag~~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~~~~~~~~~a~~~al~AG~D~~m~~~~~~~  323 (602)
T 1x38_A          244 KGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQ  323 (602)
T ss_dssp             TTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSCHHH
T ss_pred             cCCCEEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHHhhcCCCHHHHHHHHHHcCCCcccCCcchhh
Confidence            99999999999999999999999999999999999999999999999998766666778999999999999999988878


Q ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCchhhhhhcCChHHHHHHHHHHHhhhhhhccCCCCCC--C
Q 038523          350 FIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKSLVLLKNGENADG--A  427 (631)
Q Consensus       350 ~~~~l~~av~~g~i~~~~ld~av~Ril~~k~~~Gl~~~p~~~~~~~~~~~~~~~~~~a~~~a~~sivLLKN~~~~~~--~  427 (631)
                      +.+.|.++|++|+++++|||+||+|||++|+++|+|++|+.+......+++++|+++++++|++|||||||    ++  +
T Consensus       324 ~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN----~~~~~  399 (602)
T 1x38_A          324 FISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKSLVLLKN----GKTST  399 (602)
T ss_dssp             HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGGTTCHHHHHHHHHHHHHHCEEEEE----CSSTT
T ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCcchhhccCCHHHHHHHHHHHHhceEEecc----CCCCC
Confidence            88999999999999999999999999999999999999987765456789999999999999999999999    55  4


Q ss_pred             ---ccCCCCCCceEEEEccCCCccccccCCceeecccCCCCCCCccCCHHHHHHhccCCCceEEEcCCCcHHHHHhcCCC
Q 038523          428 ---ALPLPKNAARILVAGTHANNLGYQCGGWTIAWQGLSGNNNTVGTTILNGISATVDSDTEIIFSENPSMDYVKASNVS  504 (631)
Q Consensus       428 ---~LPL~~~~~ki~vig~~a~~~~~~~g~~~~~~~~~~g~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d  504 (631)
                         +|||+++.+||+|+||+|+....++|+|+..|++.++. .+...++++++++.+.....+.|..+++.....++.+|
T Consensus       400 ~~~~LPL~~~~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~-~~~~~t~~~~l~~~~~~~~~v~~~~~~~~~~~~a~~aD  478 (602)
T 1x38_A          400 DAPLLPLPKKAPKILVAGSHADNLGYQCGGWTIEWQGDTGR-TTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGGFS  478 (602)
T ss_dssp             SCCCCSCCSCCSEEEEESTTTTCHHHHHCSSSSSTTCCSSC-CSSCBCHHHHHHHHSCTTCEEEEESSCCHHHHHHTTCS
T ss_pred             cccccccCCCCCEEEEEcCCCccccccCCcceeeccCCCCC-CCCcccHHHHHHHHhCCCeEEEEcCCCCHHHHHHhhCC
Confidence               99998756799999999998888899999988877654 35678999999998766678888877765555578999


Q ss_pred             eEEEEEeCCCCCcccCCCCcccCCCCcHHHHHHHhcCCCeEEEEECCCccccCCCCCCcceEEEccCCChhhHHHHHHhc
Q 038523          505 YAIVVVGEQPYAETQGDSLNLTISEPGPSTITNVCAAVKCVVVLVSGRPVTVGPYLPQVDALVAAWLPGTEGQGVADVLF  584 (631)
Q Consensus       505 ~~iv~vg~~~~~~~~gd~~~l~lp~~q~~li~~v~~~~~~VvV~~~g~P~~l~~~~~~v~Ail~a~~~g~~g~a~advL~  584 (631)
                      ++||++|..++.+.+|||.++.||..|.+||+++++++|+|||+++|+|+.+.+|.++++|||++|+||++++|+|||||
T Consensus       479 ~viv~~g~~~~~e~~gdr~~l~lp~~q~~li~~v~~~~~~VvVl~~g~P~~l~~~~~~~~Ail~a~~pG~~g~AiadvL~  558 (602)
T 1x38_A          479 YAIVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCATVLISGRPVVVQPLLAASDALVAAWLPGSEGQGVTDALF  558 (602)
T ss_dssp             CEEEEEECCCCCGGGGCCSSCCCCSSSHHHHHHHHTTSCEEEEEECSSCCCCHHHHHHCSEEEEEECCCSBTHHHHHHHT
T ss_pred             EEEEEeccCcccccCCCcCCcCCChhHHHHHHHHHhCCCEEEEEeCCCceeccchhhccCeEEeccCCchHHHHHHHHHc
Confidence            99999999888888889999999999999999999988999999999999998899999999999999999999999999


Q ss_pred             cCCCCCCcccccccccCCCCCCCCCCCCCCccccCCCCCCCCC
Q 038523          585 GDYGFTGRLPRTWFKTVDQLPMNFGDEQYDPLFPLGFGLTTEP  627 (631)
Q Consensus       585 G~~nPsGkLPvt~p~~~~~~p~~~g~~~~~plfpFG~GLSYt~  627 (631)
                      |++||+||||+|||++.+|+|.++|||+|+|+||||||||||+
T Consensus       559 G~~nPsGkLP~t~p~~~~~~p~~~g~~~~~plypFG~GLSYt~  601 (602)
T 1x38_A          559 GDFGFTGRLPRTWFKSVDQLPMNVGDAHYDPLFRLGYGLTTNA  601 (602)
T ss_dssp             TSSCCCCCCSSCBCSCGGGCSCCTTCSSCCCSBCTTCCBCCCC
T ss_pred             CCCCCCccCcccccCccccCCccCCCCCCCccCcCCCCcCCCC
Confidence            9999999999999999999999999999999999999999996
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Back     alignment and structure
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A* Back     alignment and structure
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A* Back     alignment and structure
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A* Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 631
d1x38a1388 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te 1e-117
d1x38a2214 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, 3e-58
d1tr9a_330 c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio chol 5e-27
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  352 bits (902), Expect = e-117
 Identities = 275/387 (71%), Positives = 322/387 (83%)

Query: 28  YMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVP 87
           Y+ ++D  +P+  R+ DL+ RMTL EKIGQM Q++R  AT +++RD  IGSLLSGGGSVP
Sbjct: 2   YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVP 61

Query: 88  RLQATPQEWIDMVNDFQKGSLSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDP 147
           R  AT +EW DMV+ FQK  +S+RLGIPMIYGIDAVHG NNVY ATIFPHNVGLGATRDP
Sbjct: 62  RKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDP 121

Query: 148 DLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFESYSEDPKIVKLMTEIIPGLQ 207
            LV+RIG ATALEVRATGI YAFAPCIAVCRDPRWGRC+ESYSED +IV+ MTE+IPGLQ
Sbjct: 122 YLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGLQ 181

Query: 208 GDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDA 267
           GD+P D   G+P+VAG++KVAACAKH+VGDGGT  GINENNT+I+R GLM+IHMPAY +A
Sbjct: 182 GDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNA 241

Query: 268 IIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYS 327
           + KGVSTVM+SYSSWNG+KMHAN+DLVT +LK TLKF+GFVISDW+GIDRITTP  ++YS
Sbjct: 242 MDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYS 301

Query: 328 YSVLAGVNAGIDMFMLPFNHTDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEK 387
           YSV A + AG+DM M+P  +  FI ILT  V   ++PMSRIDDAV RILRVKFTMGLFE 
Sbjct: 302 YSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFEN 361

Query: 388 PMADQTFIDQLGSQAHRDLAREAVRKS 414
           P AD    +QLG Q HRDLAREA RKS
Sbjct: 362 PYADPAMAEQLGKQEHRDLAREAARKS 388
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 Back     information, alignment and structure
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Length = 330 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query631
d1x38a1388 Beta-D-glucan exohydrolase, N-terminal domain {Bar 100.0
d1tr9a_330 Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 100.0
d1x38a2214 Beta-D-glucan exohydrolase, C-terminal domain {Bar 100.0
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=2.8e-87  Score=719.60  Aligned_cols=387  Identities=71%  Similarity=1.185  Sum_probs=360.1

Q ss_pred             CCCCCCCCCCHHHHHHHHHhhCCHHHHHhcccccccchhhHHHHHhcCcceEeeCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 038523           28 YMKFRDPQQPLSKRIRDLMNRMTLEEKIGQMVQLDRAAATAEIMRDYSIGSLLSGGGSVPRLQATPQEWIDMVNDFQKGS  107 (631)
Q Consensus        28 ~~~~~~~~~~~~~rv~~ll~~mtleeKigQl~~~~~~~~~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~  107 (631)
                      .+.|+||++|+++||++|+++||||||||||+++.....+.+.++++++|+++++++..++...++++|+++++.+|+.+
T Consensus         2 ~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~~   81 (388)
T d1x38a1           2 YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKAC   81 (388)
T ss_dssp             CCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCHHHHHHHHHHCCCHHHHHhhhcccccccCCHHHHHhccccceeecCCcccCCCCCHHHHHHHHHHHHHHH
Confidence            34599999999999999999999999999999987777788899999999999998888888899999999999999999


Q ss_pred             ccCCCCCCcEEeecCCCCcccCCCccCCCccccccCCCCHHHHHHHHHHHHHHHHHcCCCeeeecccccccCCCCCcccc
Q 038523          108 LSSRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVRRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCFE  187 (631)
Q Consensus       108 ~~~~lgiP~~~~~D~egG~~~~~~~t~fP~~~~l~at~d~~la~~~g~~~g~el~a~Gin~~~aPvvDv~~~p~~gr~~r  187 (631)
                      ..+++|||+++++|+|+|.+.+.+.|.||+++++|+|||+++++++|+.+|+|+|++|||++||||+||.+||+|||++|
T Consensus        82 ~~~~~giPlli~~D~e~G~~~~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~Gin~~~aPv~Dv~~~p~~gr~~e  161 (388)
T d1x38a1          82 MSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYE  161 (388)
T ss_dssp             HTSSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCSCTTSTTGGG
T ss_pred             HhccCCCCceeecccccCcccccccccchhhhhccccCCHHHHHHHHHHhhHHHHhcCCccccCCccccccccccccccc
Confidence            88999999999999999998888899999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCHHHHHHHHhhhccccCCCCCCCCCCCcccCCCCceeEeecccccCCCCCCCCCCCCcccCHhHHHhhccHHHHHH
Q 038523          188 SYSEDPKIVKLMTEIIPGLQGDIPSDLPKGIPYVAGRDKVAACAKHYVGDGGTTRGINENNTVIDRHGLMSIHMPAYNDA  267 (631)
Q Consensus       188 sfgeDp~lv~~~a~~v~G~q~~~~~~~~~g~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~~  267 (631)
                      ||||||.++++|+.+|.++|+........|.+...+++||++|+|||||||++..++|...+.++.++|++.||+||+.+
T Consensus       162 t~geDp~l~~~~~~~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~~~~~~~~~i~~~~l~~~~l~pf~~~  241 (388)
T d1x38a1         162 SYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNA  241 (388)
T ss_dssp             SSCSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHHH
T ss_pred             CccCCHHHHHHHHhhhhhhhchhhhhhcccccccccccCcceeeeeeecCCccccCccccccchhHHHHHHHhhhhhHHH
Confidence            99999999999976888888765544444444333467999999999999999888898888899999999999999999


Q ss_pred             HHhCCceEEEeccccCCccccCCHHHHHHHHHhhcCCCcEEeCchhhhhhhccCCCCChHHHHHHHHHcCCceecCCCCh
Q 038523          268 IIKGVSTVMVSYSSWNGLKMHANRDLVTNFLKGTLKFRGFVISDWQGIDRITTPEHANYSYSVLAGVNAGIDMFMLPFNH  347 (631)
Q Consensus       268 i~ag~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~lgf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~  347 (631)
                      |++|+.+||++|+.+||+|+|.|+++|+++||++|||+|+|||||++|.++...+.....++.+.++.||+||+|.+.+.
T Consensus       242 i~~g~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~~~~~~~~~~~~~a~~ag~d~~~~~~~~  321 (388)
T d1x38a1         242 MDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKY  321 (388)
T ss_dssp             HHTTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSCH
T ss_pred             HhhccccccccccccCCccccCCHHHHHHHHHhccCCCceeecchhhccccccccCCcHHHHHHHHHhcCCCeecCCccH
Confidence            99999999999999999999999999999999999999999999999999987766666678899999999999999888


Q ss_pred             HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCchhhhhhcCChHHHHHHHHHHHhh
Q 038523          348 TDFIDILTDFVERKIVPMSRIDDAVRRILRVKFTMGLFEKPMADQTFIDQLGSQAHRDLAREAVRKS  414 (631)
Q Consensus       348 ~~~~~~l~~av~~g~i~~~~ld~av~Ril~~k~~~Gl~~~p~~~~~~~~~~~~~~~~~~a~~~a~~s  414 (631)
                      ..+.+.|.+||++|+|+++|||+||+|||++|+++||||+|+.++.....+++++|+++|+|+|+||
T Consensus       322 ~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd~p~~~~~~~~~i~~~~h~~~a~~aA~~S  388 (388)
T d1x38a1         322 QQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKS  388 (388)
T ss_dssp             HHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGGTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCChhhhhhcCCHHHHHHHHHHHhcC
Confidence            8899999999999999999999999999999999999999998876667789999999999999997
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure