Citrus Sinensis ID: 038581
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 792 | 2.2.26 [Sep-21-2011] | |||||||
| Q94KD8 | 768 | Probable beta-D-xylosidas | yes | no | 0.936 | 0.966 | 0.509 | 0.0 | |
| A5JTQ2 | 774 | Beta-xylosidase/alpha-L-a | N/A | no | 0.962 | 0.984 | 0.498 | 0.0 | |
| Q9LJN4 | 781 | Probable beta-D-xylosidas | no | no | 0.910 | 0.923 | 0.529 | 0.0 | |
| A5JTQ3 | 774 | Beta-xylosidase/alpha-L-a | N/A | no | 0.948 | 0.970 | 0.494 | 0.0 | |
| Q9FLG1 | 784 | Beta-D-xylosidase 4 OS=Ar | no | no | 0.954 | 0.964 | 0.494 | 0.0 | |
| Q9FGY1 | 774 | Beta-D-xylosidase 1 OS=Ar | no | no | 0.948 | 0.970 | 0.491 | 0.0 | |
| Q9LXD6 | 773 | Beta-D-xylosidase 3 OS=Ar | no | no | 0.946 | 0.970 | 0.48 | 0.0 | |
| Q9LXA8 | 792 | Probable beta-D-xylosidas | no | no | 0.953 | 0.953 | 0.452 | 0.0 | |
| Q9SGZ5 | 767 | Probable beta-D-xylosidas | no | no | 0.926 | 0.956 | 0.448 | 0.0 | |
| Q0CB82 | 765 | Probable exo-1,4-beta-xyl | N/A | no | 0.768 | 0.796 | 0.424 | 1e-134 |
| >sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/775 (50%), Positives = 527/775 (68%), Gaps = 33/775 (4%)
Query: 9 LCFSLSIALLVFSTNAVDANGSSSPVFVCDPGRFSKLGLQMSSFLFCDSSLPYSIRVKDL 68
+ F I + S+++V + S F CD + L+ FC S+P RV+DL
Sbjct: 6 MAFLAVILFFLISSSSVCVH--SRETFACDTKDAATATLR-----FCQLSVPIPERVRDL 58
Query: 69 VSRMTLDEKVQQLGDFAHGVPRLGLPQYEWWSEALHGVSNVGPGTHFDDVIPGATSFPTV 128
+ R+TL EKV LG+ A +PRLG+ YEWWSEALHGVSNVGPGT F V P ATSFP V
Sbjct: 59 IGRLTLAEKVSLLGNTAAAIPRLGIKGYEWWSEALHGVSNVGPGTKFGGVYPAATSFPQV 118
Query: 129 ILTTASFNESLWKKIGQAVSTEARAMYNLGRAGLTYWSPNINVARDPRWGRITETPGEDP 188
I T ASFN SLW+ IG+ VS EARAMYN G GLTYWSPN+N+ RDPRWGR ETPGEDP
Sbjct: 119 ITTVASFNASLWESIGRVVSNEARAMYNGGVGGLTYWSPNVNILRDPRWGRGQETPGEDP 178
Query: 189 FVVGRYAVNYVRGLQDVEGHENATDLNSRPLKVSSCCKHYAAYDVDNWKGVDRYHFDARV 248
V G+YA +YVRGLQ G++ + LKV++CCKH+ AYD+DNW GVDR+HF+A+V
Sbjct: 179 VVAGKYAASYVRGLQ---GNDRSR------LKVAACCKHFTAYDLDNWNGVDRFHFNAKV 229
Query: 249 TEQDMEETFLRPFEMCVKEGDASSVMCSYNRVNGIPSCADPKLLNQTVRGEWDLHGYIVA 308
++QD+E+TF PF MCVKEG+ +S+MCSYN+VNG+P+CADP LL +T+R +W L+GYIV+
Sbjct: 230 SKQDIEDTFDVPFRMCVKEGNVASIMCSYNQVNGVPTCADPNLLKKTIRNQWGLNGYIVS 289
Query: 309 DCDSIQVMVDNHKFLADSKEDAVAQTLKAGLDLDCGQYYTNFTGNAVQQGKVKETDIDKS 368
DCDS+ V+ D + + E+A A ++KAGLDLDCG + T +AV++ ++E+D+D +
Sbjct: 290 DCDSVGVLYDTQHYTG-TPEEAAADSIKAGLDLDCGPFLGAHTIDAVKKNLLRESDVDNA 348
Query: 369 LKYLYTVLMRLGFFDG---SPQYVSLGKQDICSDENIELAAEAAREGIVLLKNDQNTLPL 425
L TV MRLG FDG + Y LG +C+ + LA EAA++GIVLLKN ++LPL
Sbjct: 349 LINTLTVQMRLGMFDGDIAAQPYGHLGPAHVCTPVHKGLALEAAQQGIVLLKNHGSSLPL 408
Query: 426 NSAKVKTVAVVGPHANATVAMIGNYAGIPCRYMSPIAGFSGYANVTYKTGCDDVACKSNN 485
+S + +TVAV+GP+++ATV MIGNYAG+ C Y SP+ G +GYA ++ GC DV C +
Sbjct: 409 SSQRHRTVAVIGPNSDATVTMIGNYAGVACGYTSPVQGITGYARTIHQKGCVDVHCMDDR 468
Query: 486 SIFAASEAAKTADATIILAGLDLSVEAESLDREDLWLPGYQTQLINQVAEVAKGPVILVI 545
AA EAA+ ADAT+++ GLD S+EAE DR L LPG Q +L+++VA+ AKGPVILV+
Sbjct: 469 LFDAAVEAARGADATVLVMGLDQSIEAEFKDRNSLLLPGKQQELVSRVAKAAKGPVILVL 528
Query: 546 MSAGGVDIAFAETNTNIKAILWAGYPGEEGGRAIADVVFGKFNPGGRLPITWYNGDYVQM 605
MS G +DI+FAE + I AI+WAGYPG+EGG AIAD++FG NPGG+LP+TWY DY+
Sbjct: 529 MSGGPIDISFAEKDRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDYLTN 588
Query: 606 LPLTSMPLRPVDSLGYPGRTYKFYNGPTLYPFGYGLSYTQFKYNLLSFTKTIQVNLNKLQ 665
LP+T M +RPV S PGRTY+FY+GP +YPFG+GLSYT+F +N+ K I + +
Sbjct: 589 LPMTEMSMRPVHSKRIPGRTYRFYDGPVVYPFGHGLSYTRFTHNIADAPKVIPIAV---- 644
Query: 666 HCRNLNYTSDASKTRCPGVLVNDLRCDDY-FEFKVDFQNVGSTDGSDVVIVYSKPPAEIA 724
R N T R V RCD V+ NVGS DG+ ++V+S PP
Sbjct: 645 --RGRNGTVSGKSIR-----VTHARCDRLSLGVHVEVTNVGSRDGTHTMLVFSAPPGGEW 697
Query: 725 ATYIKQVIGFQRVFVRAGRNKRIKFVFNACKSLNIVDYAANTLLPAGEHTIFVGN 779
A KQ++ F+RV V G KR++ + CK L++VD A N +P G+H I +G+
Sbjct: 698 APK-KQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGD 751
|
May be involved in remodeling of xylans during vascular development. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: - |
| >sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia GN=Xyl1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q9FLG1|BXL4_ARATH Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|Q0CB82|BXLB_ASPTN Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=bxlB PE=3 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 792 | ||||||
| 255557375 | 802 | Beta-glucosidase, putative [Ricinus comm | 0.969 | 0.957 | 0.713 | 0.0 | |
| 449433577 | 812 | PREDICTED: probable beta-D-xylosidase 2- | 0.997 | 0.972 | 0.672 | 0.0 | |
| 225432136 | 809 | PREDICTED: probable beta-D-xylosidase 5- | 0.993 | 0.972 | 0.645 | 0.0 | |
| 224093292 | 694 | predicted protein [Populus trichocarpa] | 0.871 | 0.994 | 0.702 | 0.0 | |
| 225432134 | 805 | PREDICTED: probable beta-D-xylosidase 5- | 0.992 | 0.976 | 0.627 | 0.0 | |
| 225432132 | 805 | PREDICTED: beta-xylosidase/alpha-L-arabi | 0.954 | 0.939 | 0.631 | 0.0 | |
| 297736787 | 774 | unnamed protein product [Vitis vinifera] | 0.953 | 0.975 | 0.609 | 0.0 | |
| 297736788 | 746 | unnamed protein product [Vitis vinifera] | 0.914 | 0.970 | 0.597 | 0.0 | |
| 359477633 | 781 | PREDICTED: LOW QUALITY PROTEIN: beta-D-x | 0.969 | 0.983 | 0.604 | 0.0 | |
| 297736786 | 745 | unnamed protein product [Vitis vinifera] | 0.878 | 0.934 | 0.592 | 0.0 |
| >gi|255557375|ref|XP_002519718.1| Beta-glucosidase, putative [Ricinus communis] gi|223541135|gb|EEF42691.1| Beta-glucosidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1169 bits (3024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/772 (71%), Positives = 644/772 (83%), Gaps = 4/772 (0%)
Query: 21 STNAVDAN-GSSSPVFVCDPGRFSKLGLQMSSFLFCDSSLPYSIRVKDLVSRMTLDEKVQ 79
+ N DAN SS +VCD R+ LGL M++F FCDSSL Y +R KDLV++MTL EKVQ
Sbjct: 34 TLNHDDANPRGSSFTYVCDSSRYDNLGLDMTTFGFCDSSLSYEVRAKDLVNQMTLKEKVQ 93
Query: 80 QLGDFAHGVPRLGLPQYEWWSEALHGVSNVGPGTHFDDVIPGATSFPTVILTTASFNESL 139
QLGD A+GVPRLG+P+YEWWSEALHGVS+VGPGT FDD++PGATSFPT ILTTASFNESL
Sbjct: 94 QLGDLAYGVPRLGIPKYEWWSEALHGVSDVGPGTFFDDLVPGATSFPTTILTTASFNESL 153
Query: 140 WKKIGQAVSTEARAMYNLGRAGLTYWSPNINVARDPRWGRITETPGEDPFVVGRYAVNYV 199
WK IGQA S +ARAMYNLGRAGLTYWSPN+NV RDPRWGR ETPGEDP+VVGRYAVNYV
Sbjct: 154 WKNIGQA-SAKARAMYNLGRAGLTYWSPNVNVVRDPRWGRTVETPGEDPYVVGRYAVNYV 212
Query: 200 RGLQDVEGHENATDLNSRPLKVSSCCKHYAAYDVDNWKGVDRYHFDARVTEQDMEETFLR 259
RGLQDVEG EN TDLN+RPLKVSSCCKHYAAYDV+ W+GV+R FDARVTEQDM ETFLR
Sbjct: 213 RGLQDVEGTENYTDLNTRPLKVSSCCKHYAAYDVEKWQGVERLTFDARVTEQDMVETFLR 272
Query: 260 PFEMCVKEGDASSVMCSYNRVNGIPSCADPKLLNQTVRGEWDLHGYIVADCDSIQVMVDN 319
PFEMCVKEGD SSVMCS+NRVNGIP+CADPKLLNQT+RG+WDLHGYIV+DCDSI+VMVDN
Sbjct: 273 PFEMCVKEGDVSSVMCSFNRVNGIPTCADPKLLNQTIRGDWDLHGYIVSDCDSIEVMVDN 332
Query: 320 HKFLADSKEDAVAQTLKAGLDLDCGQYYTNFTGNAVQQGKVKETDIDKSLKYLYTVLMRL 379
HKFL D+ EDAVAQ LKAGLDLDCG YYTNFT +V+QGK +E ID+SLKYLY VLMRL
Sbjct: 333 HKFLGDTNEDAVAQVLKAGLDLDCGGYYTNFTETSVKQGKAREEYIDRSLKYLYVVLMRL 392
Query: 380 GFFDGSPQYVSLGKQDICSDENIELAAEAAREGIVLLKNDQNTLPLNSAKVKTVAVVGPH 439
GFFDG+PQY LGK+DIC+ EN+ELA +AAREGIVLLKN+ +TLPL+ KVK +AVVGPH
Sbjct: 393 GFFDGTPQYQKLGKKDICTKENVELAKQAAREGIVLLKNN-DTLPLSMDKVKNLAVVGPH 451
Query: 440 ANATVAMIGNYAGIPCRYMSPIAGFSGYANVTYKTGCDDVACKSNNSIFAASEAAKTADA 499
ANAT MIGNYAG+PCRY+SPI GFS Y+NVTY+ GC DV CK+ + +F A AAK ADA
Sbjct: 452 ANATRVMIGNYAGVPCRYVSPIDGFSIYSNVTYEIGC-DVPCKNESLVFPAVHAAKNADA 510
Query: 500 TIILAGLDLSVEAESLDREDLWLPGYQTQLINQVAEVAKGPVILVIMSAGGVDIAFAETN 559
TII+AGLDL++EAE LDR DL LPGYQTQLINQVA A GPVILVIM+AGGVDI+FA N
Sbjct: 511 TIIVAGLDLTIEAEGLDRNDLLLPGYQTQLINQVAGAANGPVILVIMAAGGVDISFARDN 570
Query: 560 TNIKAILWAGYPGEEGGRAIADVVFGKFNPGGRLPITWYNGDYVQMLPLTSMPLRPVDSL 619
IKAILW GYPG+EGG AIADVVFGK+NPGGRLPITWY D+V+ +P+T M LRP + L
Sbjct: 571 EKIKAILWVGYPGQEGGHAIADVVFGKYNPGGRLPITWYEADFVEQVPMTYMQLRPDEEL 630
Query: 620 GYPGRTYKFYNGPTLYPFGYGLSYTQFKYNLLSFTKTIQVNLNKLQHCRNLNYTSDASKT 679
GYPG+TYKFY+G T+YPFGYGLSYT F YN+ S ++ + LNK QHCR+L Y ++ K
Sbjct: 631 GYPGKTYKFYDGSTVYPFGYGLSYTTFSYNITSAKRSKHIALNKFQHCRDLRYGNETFKP 690
Query: 680 RCPGVLVNDLRCDDYFEFKVDFQNVGSTDGSDVVIVYSKPPAEIAATYIKQVIGFQRVFV 739
CP VL + L C+D FE +V+ +N GS DGS+VV+VYSK P I +YIKQVIGF+RVFV
Sbjct: 691 SCPAVLTDHLPCNDDFELEVEVENTGSRDGSEVVMVYSKTPEGIVGSYIKQVIGFKRVFV 750
Query: 740 RAGRNKRIKFVFNACKSLNIVDYAANTLLPAGEHTIFVGNGGVSFPIHLNFN 791
+AG +++ F FN CKS I+DY A ++LP+G HTI VG+ VS P+++N++
Sbjct: 751 QAGSVEKVNFRFNVCKSFRIIDYNAYSILPSGGHTIMVGDDIVSIPLYINYS 802
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449433577|ref|XP_004134574.1| PREDICTED: probable beta-D-xylosidase 2-like [Cucumis sativus] gi|449530107|ref|XP_004172038.1| PREDICTED: probable beta-D-xylosidase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|225432136|ref|XP_002274651.1| PREDICTED: probable beta-D-xylosidase 5-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224093292|ref|XP_002309869.1| predicted protein [Populus trichocarpa] gi|222852772|gb|EEE90319.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225432134|ref|XP_002274619.1| PREDICTED: probable beta-D-xylosidase 5-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225432132|ref|XP_002274591.1| PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297736787|emb|CBI25988.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297736788|emb|CBI25989.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359477633|ref|XP_003632006.1| PREDICTED: LOW QUALITY PROTEIN: beta-D-xylosidase 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297736786|emb|CBI25987.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 792 | ||||||
| TAIR|locus:2091236 | 781 | AT3G19620 [Arabidopsis thalian | 0.902 | 0.915 | 0.529 | 6.7e-207 | |
| TAIR|locus:2196060 | 768 | BXL2 "beta-xylosidase 2" [Arab | 0.936 | 0.966 | 0.501 | 2.3e-204 | |
| TAIR|locus:2157994 | 774 | BXL1 "beta-xylosidase 1" [Arab | 0.949 | 0.971 | 0.480 | 4.1e-200 | |
| TAIR|locus:2174809 | 784 | XYL4 "beta-D-xylosidase 4" [Ar | 0.926 | 0.936 | 0.495 | 4.1e-200 | |
| TAIR|locus:2144756 | 773 | BXL3 "AT5G09730" [Arabidopsis | 0.944 | 0.967 | 0.477 | 5.7e-194 | |
| TAIR|locus:2029391 | 767 | AT1G78060 [Arabidopsis thalian | 0.946 | 0.977 | 0.439 | 3.1e-177 | |
| TAIR|locus:2142434 | 792 | AT5G10560 [Arabidopsis thalian | 0.949 | 0.949 | 0.447 | 5.1e-177 | |
| ASPGD|ASPL0000029139 | 763 | bxlB [Emericella nidulans (tax | 0.728 | 0.756 | 0.412 | 9.4e-114 | |
| UNIPROTKB|Q5ATH9 | 763 | bxlB "Exo-1,4-beta-xylosidase | 0.728 | 0.756 | 0.412 | 9.4e-114 | |
| ASPGD|ASPL0000048081 | 803 | xlnD [Emericella nidulans (tax | 0.869 | 0.858 | 0.365 | 8.7e-111 |
| TAIR|locus:2091236 AT3G19620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2001 (709.4 bits), Expect = 6.7e-207, P = 6.7e-207
Identities = 398/751 (52%), Positives = 510/751 (67%)
Query: 54 FCDSSLPYSIRVKDLVSRMTLDEKVQQLGDFAHGVPRLGLPQYEWWSEALHGVSNVGPGT 113
FC+ SL Y R KDLVSR++L EKVQQL + A GVPRLG+P YEWWSEALHGVS+VGPG
Sbjct: 41 FCNVSLSYEARAKDLVSRLSLKEKVQQLVNKATGVPRLGVPPYEWWSEALHGVSDVGPGV 100
Query: 114 HFDDVIPGATSFPTVILTTASFNESLWKKIGQAVSTEARAMYNLGRAGLTYWSPNINVAR 173
HF+ +PGATSFP ILT ASFN SLW K+G+ VSTEARAM+N+G AGLTYWSPN+NV R
Sbjct: 101 HFNGTVPGATSFPATILTAASFNTSLWLKMGEVVSTEARAMHNVGLAGLTYWSPNVNVFR 160
Query: 174 DPRWGRITETPGEDPFVVGRYAVNYVRGLQDVEGHENATDLNSRPLKVSSCCKHYAAYDV 233
DPRWGR ETPGEDP VV +YAVNYV+GLQDV H+ SR LKVSSCCKHY AYD+
Sbjct: 161 DPRWGRGQETPGEDPLVVSKYAVNYVKGLQDV--HDAG---KSRRLKVSSCCKHYTAYDL 215
Query: 234 DNWKGVDRYHFDARVTEQDMEETFLRPFEMCVKEGDASSVMCSYNRVNGIPSCADPKLLN 293
DNWKG+DR+HFDA+VT+QD+E+T+ PF+ CV+EGD SSVMCSYNRVNGIP+CADP LL
Sbjct: 216 DNWKGIDRFHFDAKVTKQDLEDTYQTPFKSCVEEGDVSSVMCSYNRVNGIPTCADPNLLR 275
Query: 294 QTVRGEWDLHGYIVADCDSIQVMVDNHKFLADSKEDAVAQTLKAGLDLDCGQYYTNFTGN 353
+RG+W L GYIV+DCDSIQV ++ + ++EDAVA LKAGL+++CG + +T N
Sbjct: 276 GVIRGQWRLDGYIVSDCDSIQVYFNDIHY-TKTREDAVALALKAGLNMNCGDFLGKYTEN 334
Query: 354 AVQQGKVKETDIDKSLKYLYTVLMRLGFFDGSPQ---YVSLGKQDICSDENIELAAEAAR 410
AV+ K+ +D+D++L Y Y VLMRLGFFDG P+ + +LG D+CS ++ LA EAA+
Sbjct: 335 AVKLKKLNGSDVDEALIYNYIVLMRLGFFDGDPKSLPFGNLGPSDVCSKDHQMLALEAAK 394
Query: 411 EGIVLLKNDQNTLPLNSAKVKTVAVVGPHANATVAMIGNYAGIPCRYMSPIAGFSGYA-- 468
+GIVLL+N + LPL VK +AV+GP+ANAT MI NYAG+PC+Y SPI G Y
Sbjct: 395 QGIVLLEN-RGDLPLPKTTVKKLAVIGPNANATKVMISNYAGVPCKYTSPIQGLQKYVPE 453
Query: 469 NVTYKTGCDDVACKSNNSIFXXXXXXXXXXXTIILAGLDLSVEAESLDREDLWLPGYQTQ 528
+ Y+ GC DV C I T+++ GLD +VEAE LDR +L LPGYQ +
Sbjct: 454 KIVYEPGCKDVKCGDQTLISAAVKAVSEADVTVLVVGLDQTVEAEGLDRVNLTLPGYQEK 513
Query: 529 LINQVAEVAKGPVILVIMSAGGVDIAFAETNTNIKAILWAGYPGEEGGRAIADVVFGKFN 588
L+ VA AK V+LVIMSAG +DI+FA+ + I+A+LW GYPGE GG AIA V+FG +N
Sbjct: 514 LVRDVANAAKKTVVLVIMSAGPIDISFAKNLSTIRAVLWVGYPGEAGGDAIAQVIFGDYN 573
Query: 589 PGGRLPITWYNGDYVQMLPLTSMPLRPVDSLGYPGRTYKFYNGPTLYPFGYGLSYTQFKY 648
P GRLP TWY ++ + +T M +RP + G+PGR+Y+FY G +Y FGYGLSY+ F
Sbjct: 574 PSGRLPETWYPQEFADKVAMTDMNMRPNSTSGFPGRSYRFYTGKPIYKFGYGLSYSSFST 633
Query: 649 NLLSFTKTIQVNLNKLQHCRNLNYTS--DASKTRCPGVLVNDLRCDDYFEFKVDFQNVGS 706
+LS I + N + NLN T+ D S C +DL+ + +N G
Sbjct: 634 FVLSAPSIIHIKTNPIM---NLNKTTSVDISTVNC-----HDLK----IRIVIGVKNHGL 681
Query: 707 TDGSDVVIVYSKPPAEIAATY-----IKQVIGFQRVFVRAGRNKRIKFV--FNACKSLNI 759
GS VV+V+ KPP + + Q++GF+RV V GR+ KF F+ CK+L++
Sbjct: 682 RSGSHVVLVFWKPPKCSKSLVGGGVPLTQLVGFERVEV--GRSMTEKFTVDFDVCKALSL 739
Query: 760 VDYAANTLLPAGEHTIFVG-NGGVSFPIHLN 789
VD L G H + +G N HLN
Sbjct: 740 VDTHGKRKLVTGHHKLVIGSNSDQQIYHHLN 770
|
|
| TAIR|locus:2196060 BXL2 "beta-xylosidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2157994 BXL1 "beta-xylosidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2174809 XYL4 "beta-D-xylosidase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2144756 BXL3 "AT5G09730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029391 AT1G78060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2142434 AT5G10560 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000029139 bxlB [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5ATH9 bxlB "Exo-1,4-beta-xylosidase bxlB" [Aspergillus nidulans FGSC A4 (taxid:227321)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000048081 xlnD [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q4WFI6 | BXLB_ASPFU | 3, ., 2, ., 1, ., 3, 7 | 0.4007 | 0.8901 | 0.9143 | yes | no |
| A2QA27 | XYND_ASPNC | 3, ., 2, ., 1, ., 3, 7 | 0.3727 | 0.8446 | 0.8320 | yes | no |
| O00089 | XYND_ASPNG | 3, ., 2, ., 1, ., 3, 7 | 0.3727 | 0.8446 | 0.8320 | yes | no |
| Q94KD8 | BXL2_ARATH | 3, ., 2, ., 1, ., - | 0.5096 | 0.9368 | 0.9661 | yes | no |
| Q5BAS1 | XYND_EMENI | 3, ., 2, ., 1, ., 3, 7 | 0.3652 | 0.875 | 0.8630 | yes | no |
| Q2TYT2 | BXLB_ASPOR | 3, ., 2, ., 1, ., 3, 7 | 0.4036 | 0.8320 | 0.8268 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1.37 | 0.914 |
| 3rd Layer | 3.2.1 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 792 | |||
| PLN03080 | 779 | PLN03080, PLN03080, Probable beta-xylosidase; Prov | 0.0 | |
| PRK15098 | 765 | PRK15098, PRK15098, beta-D-glucoside glucohydrolas | 1e-74 | |
| pfam00933 | 296 | pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil | 6e-64 | |
| pfam01915 | 221 | pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam | 4e-61 | |
| COG1472 | 397 | COG1472, BglX, Beta-glucosidase-related glycosidas | 1e-55 | |
| pfam14310 | 71 | pfam14310, Fn3-like, Fibronectin type III-like dom | 4e-10 |
| >gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional | Back alignment and domain information |
|---|
Score = 813 bits (2102), Expect = 0.0
Identities = 355/784 (45%), Positives = 495/784 (63%), Gaps = 38/784 (4%)
Query: 13 LSIALLVFSTNAVDANGSSSPVFVCDPGRFSKLGLQMSSFLFCDSSLPYSIRVKDLVSRM 72
L + L + + A + P F C P FS ++ FC++SLP R + LVS +
Sbjct: 8 LFLLLFLLALGATFKAADAHPQFPCKPPTFS-------AYPFCNASLPIPARARSLVSLL 60
Query: 73 TLDEKVQQLGDFAHGVPRLGLPQYEWWSEALHGVSNVGPGTHFDD-VIPGATSFPTVILT 131
TLDEK+ QL + A GVPRLG+P YEWWSE+LHG+++ GPG F+ + ATSFP VIL+
Sbjct: 61 TLDEKIAQLSNTAAGVPRLGIPPYEWWSESLHGLADNGPGVSFNSGPVSAATSFPQVILS 120
Query: 132 TASFNESLWKKIGQAVSTEARAMYNLGRAGLTYWSPNINVARDPRWGRITETPGEDPFVV 191
ASFN SLW+ IG A++ EARAMYN G+AGLT+W+PNIN+ RDPRWGR ETPGEDP V
Sbjct: 121 AASFNRSLWRAIGSAIAVEARAMYNAGQAGLTFWAPNINIFRDPRWGRGQETPGEDPAVA 180
Query: 192 GRYAVNYVRGLQDVEGHENATDLNSRPLKVSSCCKHYAAYDVDNWKGVDRYHFDARVTEQ 251
Y+V +V+G Q + + D L +S+CCKHY AYD++ W RY F+A VTEQ
Sbjct: 181 SAYSVEFVKGFQGGKWKKVRDDGEDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQ 240
Query: 252 DMEETFLRPFEMCVKEGDASSVMCSYNRVNGIPSCADPKLLNQTVRGEWDLHGYIVADCD 311
DME+T+ PF+ C++EG AS +MCSYN+VNG+P+CA LL Q R EW GYI +DCD
Sbjct: 241 DMEDTYQPPFKSCIQEGKASCLMCSYNQVNGVPACARKDLL-QKARDEWGFQGYITSDCD 299
Query: 312 SIQVMVDNHKFLADSKEDAVAQTLKAGLDLDCGQYYTNFTGNAVQQGKVKETDIDKSLKY 371
++ + + + S EDAVA LKAG+D++CG Y T +A+++GKV+E DID++L
Sbjct: 300 AVATIFEYQTY-TKSPEDAVADVLKAGMDINCGSYMLRHTQSAIEKGKVQEEDIDRALFN 358
Query: 372 LYTVLMRLGFFDGSP---QYVSLGKQDICSDENIELAAEAAREGIVLLKNDQNTLPLNSA 428
L++V +RLG FDG P Y LG ++C+ E+ ELA EAAR+GIVLLKND+ LPLN +
Sbjct: 359 LFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLLKNDKKFLPLNKS 418
Query: 429 KVKTVAVVGPHANATVAMIGNYAGIPCRYMSPIAGFSGYA-NVTYKTGCDDVACKSNNSI 487
+V ++A++GP AN + G+Y G+PC+ + G Y ++ GC DV+C S+
Sbjct: 419 EVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGF 478
Query: 488 FAASEAAKTADATIILAGLDLSVEAESLDREDLWLPGYQTQLINQVAEVAKGPVILVIMS 547
A AK AD +++AGLDLS E E DR L LPG Q LI+ VA V+K PV+LV+
Sbjct: 479 GEAIAIAKRADFVVVVAGLDLSQETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTG 538
Query: 548 AGGVDIAFAETNTNIKAILWAGYPGEEGGRAIADVVFGKFNPGGRLPITWYNGDYVQMLP 607
G VD++FA+ + I +ILW GYPGE GG+A+A+++FG +NPGGRLP+TWY + +P
Sbjct: 539 GGPVDVSFAKQDPRIASILWIGYPGEVGGQALAEIIFGDYNPGGRLPMTWYPESFTA-VP 597
Query: 608 LTSMPLRPVDSLGYPGRTYKFYNGPTLYPFGYGLSYTQFKYNLLSFTKTIQVN------- 660
+T M +R S GYPGRTY+FY G +Y FGYGLSYT+F Y +LS K + ++
Sbjct: 598 MTDMNMRADPSRGYPGRTYRFYTGDVVYGFGYGLSYTKFSYKILSAPKKLSLSRSSVQDS 657
Query: 661 ---LNKLQHCRNLNYTSDASKTRCPGVLVNDL-RCDDY-FEFKVDFQNVGSTDGSDVVIV 715
LQ L+Y V + D+ C+ F + NVG DGS VV++
Sbjct: 658 ISRKPLLQRRDELDY-----------VQIEDIASCESLRFNVHISVSNVGEMDGSHVVML 706
Query: 716 YSKPPAEIAATYIKQVIGFQRVFVRAGRNKRIKFVFNACKSLNIVDYAANTLLPAGEHTI 775
+S+ P + KQ++GF RV +GR+ + V + CK L++ + +LP G+H +
Sbjct: 707 FSRSPPVVPGVPEKQLVGFDRVHTASGRSTETEIVVDPCKHLSVANEEGKRVLPLGDHVL 766
Query: 776 FVGN 779
+G+
Sbjct: 767 MLGD 770
|
Length = 779 |
| >gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|222669 pfam14310, Fn3-like, Fibronectin type III-like domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 792 | |||
| PLN03080 | 779 | Probable beta-xylosidase; Provisional | 100.0 | |
| PRK15098 | 765 | beta-D-glucoside glucohydrolase; Provisional | 100.0 | |
| COG1472 | 397 | BglX Beta-glucosidase-related glycosidases [Carboh | 100.0 | |
| PF00933 | 299 | Glyco_hydro_3: Glycosyl hydrolase family 3 N termi | 100.0 | |
| PRK05337 | 337 | beta-hexosaminidase; Provisional | 100.0 | |
| PF01915 | 227 | Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-ter | 100.0 | |
| PF14310 | 71 | Fn3-like: Fibronectin type III-like domain; PDB: 3 | 99.82 | |
| PF07705 | 101 | CARDB: CARDB; InterPro: IPR011635 The APHP (acidic | 96.39 | |
| PF10633 | 78 | NPCBM_assoc: NPCBM-associated, NEW3 domain of alph | 95.03 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 94.35 | |
| PF14874 | 102 | PapD-like: Flagellar-associated PapD-like | 87.51 | |
| COG0486 | 454 | ThdF Predicted GTPase [General function prediction | 87.03 | |
| PRK13203 | 102 | ureB urease subunit beta; Reviewed | 86.12 | |
| PRK13202 | 104 | ureB urease subunit beta; Reviewed | 85.82 | |
| cd00407 | 101 | Urease_beta Urease beta-subunit; Urease is a nicke | 83.93 | |
| TIGR00192 | 101 | urease_beta urease, beta subunit. In a number of s | 82.7 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 80.51 |
| >PLN03080 Probable beta-xylosidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-165 Score=1461.34 Aligned_cols=742 Identities=47% Similarity=0.908 Sum_probs=641.5
Q ss_pred CCcccCCCCcccccCCCcccCcccCCCCChhHHHHHHHhcCCHHHHHhhhcCcccCCCCCCCCchhhhhhhcccccccCC
Q 038581 32 SPVFVCDPGRFSKLGLQMSSFLFCDSSLPYSIRVKDLVSRMTLDEKVQQLGDFAHGVPRLGLPQYEWWSEALHGVSNVGP 111 (792)
Q Consensus 32 ~~~~~~~~~~f~~~~~~~~~~~~~d~~~~~~~r~~~ll~~MTleEKv~ql~~~~~~~~rlgip~~~~~~~~~~g~~~~g~ 111 (792)
.++.+|++. +....||||+++++++|+++||++||||||++||.+...+++|||||.+.||+|++||++..++
T Consensus 27 ~~~~~c~~~-------~~~~~~~~~~~~~~~~r~~~Ll~~mTleEKv~~l~~~~~~vpRlGIP~~~~~~d~~hGv~~~~~ 99 (779)
T PLN03080 27 HPQFPCKPP-------TFSAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIPPYEWWSESLHGLADNGP 99 (779)
T ss_pred CCCcCCCCc-------cccCCCccCCCCCHHHHHHHHHHhcCHHHHHHHhcCCCCCCCcCCCCccceecccccccccCCC
Confidence 467778763 4566899999999999999999999999999999988889999999999999999999988888
Q ss_pred ccccC-CCCCCcccCchHhHhhhcCCHHHHHHHHHHHHHHHHHhhccCCCcceeeccccccCCCCCCCcccCCCCCChHH
Q 038581 112 GTHFD-DVIPGATSFPTVILTTASFNESLWKKIGQAVSTEARAMYNLGRAGLTYWSPNINVARDPRWGRITETPGEDPFV 190 (792)
Q Consensus 112 g~~~~-~~~~~~t~fP~~~~l~At~d~~l~~~~g~~~g~E~~a~~~~g~~Gi~~~aP~~dv~r~p~~gr~~e~fgeDP~l 190 (792)
|+++. +.+.++|.||++|++|||||++|++++|+++|+|+|+++|.|..|+++|+|++||.|||+|||++|||||||+|
T Consensus 100 g~~~~~g~~~~aT~FP~~i~laAt~d~~L~~~~g~~ig~E~ra~g~~~~~G~~~~aP~vdi~rdPrwGR~~EtfGEDP~l 179 (779)
T PLN03080 100 GVSFNSGPVSAATSFPQVILSAASFNRSLWRAIGSAIAVEARAMYNAGQAGLTFWAPNINIFRDPRWGRGQETPGEDPAV 179 (779)
T ss_pred ccccccCCCCCceECchHHhhhhcCCHHHHHHHHHHHHHHHHhhccccccCcceeecccccccCCCcCccccCcCCCHHH
Confidence 88774 33457899999999999999999999999999999999766555778899999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcCCCCcccCCCCCCeeeEeecccccCCCCCCCCCcceeecccCCHHHHHHhcchhhHHhHhcCCc
Q 038581 191 VGRYAVNYVRGLQDVEGHENATDLNSRPLKVSSCCKHYAAYDVDNWKGVDRYHFDARVTEQDMEETFLRPFEMCVKEGDA 270 (792)
Q Consensus 191 v~~~a~a~v~G~Q~~~g~~~~~~~~~~~~~V~a~~KHFpg~g~~~~~~~~~~~~~~~~~~~~l~e~~l~PF~~ai~~g~~ 270 (792)
+++|+.|||+|||+.+.....++.+.++.+|+||+||||||+++.+.++.|..+++.+++++|+|+||+||+++|++|.+
T Consensus 180 v~~~a~a~V~GlQ~~~~~~~~~~~~~~~~~V~a~~KHF~g~~~e~~~~~~r~~~~~~v~~~~L~e~yl~PF~~ai~~g~~ 259 (779)
T PLN03080 180 ASAYSVEFVKGFQGGKWKKVRDDGEDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMEDTYQPPFKSCIQEGKA 259 (779)
T ss_pred HHHHHHHHHHHhcCCCcccccccccCCCceEEEECCeeeCCCccccCCccccCccCccCHHHHHhhhhHHHHHHHHhcCC
Confidence 99999999999998410000000011345699999999999998777778888888999999999999999999999988
Q ss_pred ceeeeeccccCCcccccCHHHHHHhhhcccCCceEEEccchhhHHhhhccccccCCHHHHHHHHHHcCcCccCCccchhh
Q 038581 271 SSVMCSYNRVNGIPSCADPKLLNQTVRGEWDLHGYIVADCDSIQVMVDNHKFLADSKEDAVAQTLKAGLDLDCGQYYTNF 350 (792)
Q Consensus 271 ~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gf~G~VvSD~~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~~~~~ 350 (792)
++||||||++||+|+|.|++||++ ||+||||+|+|||||++|..+.. .|++..+.+|++++||+||+||+|..++.+.
T Consensus 260 ~~VM~sYn~vnG~Pa~~s~~lL~~-LR~ewGF~G~VvSD~~a~~~~~~-~~~~~~~~~ea~~~Al~AG~Dl~~~~~~~~~ 337 (779)
T PLN03080 260 SCLMCSYNQVNGVPACARKDLLQK-ARDEWGFQGYITSDCDAVATIFE-YQTYTKSPEDAVADVLKAGMDINCGSYMLRH 337 (779)
T ss_pred eEEEeCCcCcCCccccCCHHHHHH-HHHHhCcCCeEecchHHHHHhhh-cccccCCHHHHHHHHHHcCCCcccCchhHHH
Confidence 899999999999999999999986 99999999999999999999987 6777778999999999999999998877789
Q ss_pred HHHHHhcCCCCHHHHHhHHHHHHHHHHHhcCCCCCC---cccCCCcccCCCHHHHHHHHHHHHhhhhhcccCCCCCCCCC
Q 038581 351 TGNAVQQGKVKETDIDKSLKYLYTVLMRLGFFDGSP---QYVSLGKQDICSDENIELAAEAAREGIVLLKNDQNTLPLNS 427 (792)
Q Consensus 351 l~~av~~G~i~~~~ld~av~RiL~~k~~~Glf~~~p---~~~~~~~~~v~~~~~~~la~~~A~esiVLLKN~~~~LPL~~ 427 (792)
|.+||++|+|++++||+||+|||++|+++|+|+.++ +|.++....+.+++|+++|+++|+||||||||++++|||++
T Consensus 338 l~~av~~G~i~e~~ID~av~RiL~~k~rlGlfd~~~~~~~~~~~~~~~v~~~~h~~lA~eaA~~siVLLKN~~~~LPL~~ 417 (779)
T PLN03080 338 TQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLLKNDKKFLPLNK 417 (779)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcCCCcccccccccccccCCHHHHHHHHHHHHhCEEEEecCCCCCCCCC
Confidence 999999999999999999999999999999999432 23444456788999999999999999999999999999987
Q ss_pred CCCceEEEEccCccchhhhcCcccCCCCccCChhhhhcccc-eEEEeeccCCcccCCcchHHHHHHHhhcCCEEEEEEec
Q 038581 428 AKVKTVAVVGPHANATVAMIGNYAGIPCRYMSPIAGFSGYA-NVTYKTGCDDVACKSNNSIFAASEAAKTADATIILAGL 506 (792)
Q Consensus 428 ~~~~kIaviG~~a~~~~~~~G~~~g~~~~~~t~~~gl~~~~-~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vG~ 506 (792)
.+.+||+||||+|+....++|+|++.+++.+|++++|+++. .+.|..||....+.+...+++|+++|++||++||++|.
T Consensus 418 ~~~~~IaViGp~A~~~~~~~g~~~~~~~~~~t~~~gl~~~~~~~~y~~g~~~~~~~~~~~~~~A~~~A~~aD~vIv~~G~ 497 (779)
T PLN03080 418 SEVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAIAIAKRADFVVVVAGL 497 (779)
T ss_pred CCCCEEEEECCCCCCcCcCCCCCCCCCCCCCCHHHHHHHHhhcceeccCccccccCchhhHHHHHHHhccCCEEEEEeCC
Confidence 65679999999999988888889998889999999999875 57899998765555566789999999999999999999
Q ss_pred CCCcccccCCCCCCCCChhhHHHHHHHHHhcCCCEEEEEeCCceeecccccccCCccEEEEccCCCchhHHHHHHHHhCC
Q 038581 507 DLSVEAESLDREDLWLPGYQTQLINQVAEVAKGPVILVIMSAGGVDIAFAETNTNIKAILWAGYPGEEGGRAIADVVFGK 586 (792)
Q Consensus 507 ~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~~~~kpvVvVl~~g~P~~l~~~~~~~~v~Ail~a~~pG~e~g~AlAdVL~G~ 586 (792)
+...++|+.||.+|.||+.|.+||++|++++++|||||+++|+|++|+|+.++++++|||++|||||++|+|+||||||+
T Consensus 498 ~~~~e~E~~Dr~~l~Lp~~Q~~LI~~va~~~~~pvIvVl~~g~Pv~l~~~~~~~~v~AIl~~~ypGqegG~AiAdvLfG~ 577 (779)
T PLN03080 498 DLSQETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGGQALAEIIFGD 577 (779)
T ss_pred CccccccCCCcccccCCccHHHHHHHHHhhcCCCEEEEEeCCceeeccchhccCCCCeEEEccCCcccchhhhHHHHcCC
Confidence 98899999999999999999999999998777899999999999999998766789999999999999999999999999
Q ss_pred CCCCCCCCeecccCCccCCCCCcCCCCCCCCCCCCCCccccccCCCCcccccCCCCCCceeeeccccccceeccccc--c
Q 038581 587 FNPGGRLPITWYNGDYVQMLPLTSMPLRPVDSLGYPGRTYKFYNGPTLYPFGYGLSYTQFKYNLLSFTKTIQVNLNK--L 664 (792)
Q Consensus 587 ~nPsGkLPvT~~~~~~~~~~p~~~~~~~~~~~~~~~g~~Yr~~~~~~~ypFG~GLSYTtF~ys~l~~~~~~~~~~~~--~ 664 (792)
+|||||||+||||+++ .++|++++++++++..+|+|++||||+.+|+||||||||||||+|++++++..++++... .
T Consensus 578 vnPsGkLPvT~~p~~~-~~~P~~~~~~~~~~~~~~pg~~Yr~~~~~p~ypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~ 656 (779)
T PLN03080 578 YNPGGRLPMTWYPESF-TAVPMTDMNMRADPSRGYPGRTYRFYTGDVVYGFGYGLSYTKFSYKILSAPKKLSLSRSSVQD 656 (779)
T ss_pred CCCCCcCeeeeccccc-ccCCccccCcccccccCCCCCCceeCCCCcceeccCCCccceeEecccccccccccccccccc
Confidence 9999999999988887 579998888887767789999999999999999999999999999998754321121100 0
Q ss_pred -cccccccccCCCccCCCCcccccC-CCCCc-eEEEEEEEEecCCCCcceeEEEeeeCCCCcchhhhhhhccccccccCC
Q 038581 665 -QHCRNLNYTSDASKTRCPGVLVND-LRCDD-YFEFKVDFQNVGSTDGSDVVIVYSKPPAEIAATYIKQVIGFQRVFVRA 741 (792)
Q Consensus 665 -~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~p 741 (792)
..+.. ....+ . ......... ..|+. .++|+|+|||||+++|+||||||+++|.++..+|.|||+||+||+|+|
T Consensus 657 ~~~~~~-~~~~~--~-~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~evvQlYv~~p~~~~~~P~k~L~gF~kv~L~~ 732 (779)
T PLN03080 657 SISRKP-LLQRR--D-ELDYVQIEDIASCESLRFNVHISVSNVGEMDGSHVVMLFSRSPPVVPGVPEKQLVGFDRVHTAS 732 (779)
T ss_pred cccccc-ccccc--c-ccccccccccccCCCceEEEEEEEEECCcccCcEEEEEEEecCccCCCCcchhccCcEeEeeCC
Confidence 00000 00000 0 000000000 11232 699999999999999999999999999888889999999999999999
Q ss_pred CCEEEEEEEeccCCCeeEEeCCCCEEEeCeEEEEEEeCCceeEEEE
Q 038581 742 GRNKRIKFVFNACKSLNIVDYAANTLLPAGEHTIFVGNGGVSFPIH 787 (792)
Q Consensus 742 Ges~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~vG~ss~~~~~~ 787 (792)
||+++|+|+|+++++|++||++++|++|+|+|+|+||.+++++.++
T Consensus 733 Ges~~V~~~l~~~~~ls~~d~~~~~~v~~G~y~l~vG~~~~~~~~~ 778 (779)
T PLN03080 733 GRSTETEIVVDPCKHLSVANEEGKRVLPLGDHVLMLGDLEHSLSIE 778 (779)
T ss_pred CCEEEEEEEeCchHHceEEcCCCcEEEeCccEEEEEeCCccceEEe
Confidence 9999999999975789999999999999999999999999665554
|
|
| >PRK15098 beta-D-glucoside glucohydrolase; Provisional | Back alignment and domain information |
|---|
| >COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK05337 beta-hexosaminidase; Provisional | Back alignment and domain information |
|---|
| >PF01915 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-terminal domain; InterPro: IPR002772 Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3 | Back alignment and domain information |
|---|
| >PF14310 Fn3-like: Fibronectin type III-like domain; PDB: 3ABZ_D 3AC0_D 2X40_A 2X41_A 2X42_A | Back alignment and domain information |
|---|
| >PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins | Back alignment and domain information |
|---|
| >PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known | Back alignment and domain information |
|---|
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
| >PF14874 PapD-like: Flagellar-associated PapD-like | Back alignment and domain information |
|---|
| >COG0486 ThdF Predicted GTPase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK13203 ureB urease subunit beta; Reviewed | Back alignment and domain information |
|---|
| >PRK13202 ureB urease subunit beta; Reviewed | Back alignment and domain information |
|---|
| >cd00407 Urease_beta Urease beta-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide | Back alignment and domain information |
|---|
| >TIGR00192 urease_beta urease, beta subunit | Back alignment and domain information |
|---|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 792 | ||||
| 2x40_A | 721 | Structure Of Beta-Glucosidase 3b From Thermotoga Ne | 1e-36 | ||
| 2x42_A | 721 | Structure Of Beta-Glucosidase 3b From Thermotoga Ne | 6e-36 | ||
| 4i3g_A | 829 | Crystal Structure Of Desr, A Beta-glucosidase From | 2e-35 | ||
| 4i3g_A | 829 | Crystal Structure Of Desr, A Beta-glucosidase From | 4e-10 | ||
| 4i8d_A | 714 | Crystal Structure Of Beta-D-Glucoside Glucohydrolas | 1e-31 | ||
| 3zyz_A | 713 | Crystal Structure Of A Glycoside Hydrolase Family 3 | 1e-31 | ||
| 3rrx_A | 822 | Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet | 2e-29 | ||
| 3usz_A | 822 | Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc | 3e-29 | ||
| 3ac0_A | 845 | Crystal Structure Of Beta-Glucosidase From Kluyvero | 4e-27 | ||
| 3ac0_A | 845 | Crystal Structure Of Beta-Glucosidase From Kluyvero | 2e-13 | ||
| 1lq2_A | 602 | Crystal Structure Of Barley Beta-D-Glucan Glucohydr | 5e-25 | ||
| 1ex1_A | 605 | Beta-D-Glucan Exohydrolase From Barley Length = 605 | 5e-25 | ||
| 3abz_A | 845 | Crystal Structure Of Se-Met Labeled Beta-Glucosidas | 5e-24 | ||
| 3abz_A | 845 | Crystal Structure Of Se-Met Labeled Beta-Glucosidas | 4e-13 | ||
| 3bmx_A | 642 | Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis | 2e-10 | ||
| 4gyj_A | 648 | Crystal Structure Of Mutant (D318n) Bacillus Subtil | 6e-10 | ||
| 3lk6_A | 616 | Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) Fro | 7e-10 |
| >pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 | Back alignment and structure |
|
| >pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 | Back alignment and structure |
| >pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 | Back alignment and structure |
| >pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 | Back alignment and structure |
| >pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 | Back alignment and structure |
| >pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 | Back alignment and structure |
| >pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 | Back alignment and structure |
| >pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 | Back alignment and structure |
| >pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 | Back alignment and structure |
| >pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 | Back alignment and structure |
| >pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 | Back alignment and structure |
| >pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 | Back alignment and structure |
| >pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 | Back alignment and structure |
| >pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 | Back alignment and structure |
| >pdb|3BMX|A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis Length = 642 | Back alignment and structure |
| >pdb|4GYJ|A Chain A, Crystal Structure Of Mutant (D318n) Bacillus Subtilus Family 3 Glycoside Hydrolase (Nagz) In Complex With Glcnac-Murnac (Space Group P1) Length = 648 | Back alignment and structure |
| >pdb|3LK6|A Chain A, Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) From Bacillus Subtilis Length = 616 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 | Back alignment and structure |
|---|
Score = 482 bits (1243), Expect = e-160
Identities = 181/796 (22%), Positives = 317/796 (39%), Gaps = 178/796 (22%)
Query: 64 RVKDLVSRMTLDEKVQQL--GDFA-----------------HGVPRLGLPQYEWWSEALH 104
+V +++S++TL+EKV+ + H VPR+GLP + ++
Sbjct: 3 KVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGPA 61
Query: 105 GVSNVGPGTHFDDVIPGATSFPTVILTTASFNESLWKKIGQAVSTEARAMYNLGRAGLT- 163
G+ + ++ T+FP I+ +++N L +++G+A+ E R G+
Sbjct: 62 GLRINPTRENDENTYY-TTAFPVEIMLASTWNRELLEEVGKAMGEEVREY------GVDV 114
Query: 164 YWSPNINVARDPRWGRITETPGEDPFVVGRYAVNYVRGLQDVEGHENATDLNSRPLKVSS 223
+P +N+ R+P GR E EDP + G A ++V+G+Q V +
Sbjct: 115 LLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ--------------GVGA 160
Query: 224 CCKHYAAYDVDNWKGVDRYHFDARVTEQDMEETFLRPFEMCVKEGDASSVMCSYNRVNGI 283
C KH+ A + + R D V+E+ + E +LR FE+ VK+ SVM +YN++NG
Sbjct: 161 CIKHFVANNQETN----RMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGK 216
Query: 284 PSCADPKLLNQTVRGEWDLHGYIVADCDSIQVMVDNHKFLADSKEDAVAQTLKAGLDLDC 343
+ LL + +R EW G++++D + ++ V Q LKAG DL
Sbjct: 217 YCSQNEWLLKKVLREEWGFEGFVMSDWYAG--------------DNPVEQ-LKAGNDLIM 261
Query: 344 -GQYYTNFTG---------NAVQQGKVKETDIDKSLKYLYTVLMRLGFFDGSPQYVSLGK 393
G+ Y T A+++GK+ E +D+ ++ + VL+ F
Sbjct: 262 PGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFKNYRY-----S 316
Query: 394 QDICSDENIELAAEAAREGIVLLKNDQNTLPLNSAKVKTVAVVGPHANATVAM-IGNYAG 452
+++ ++A EA EG+VLL+N+ LPL+ + +A+ G T+ G+
Sbjct: 317 NKPDLEKHAKVAYEAGAEGVVLLRNE-EALPLS--ENSKIALFGTGQIETIKGGTGSGDT 373
Query: 453 IPCRYMSPIAGF---SGYANVTYKTGCDDVACKSNN------------------------ 485
P +S + G + +D K
Sbjct: 374 HPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFL 433
Query: 486 SIFAASEAAKTADATIILAGLDLSVEAESLDRE----DLWLPGYQTQLINQVAEVAKG-- 539
S + AK D +I+ E DR+ D +L +T LI V+
Sbjct: 434 SEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQG 490
Query: 540 -PVILVIMSAGGVDIA-FAETNTNIKAILWAGYPGEEGGRAIADVVFGKFNPGGRLPITW 597
VI+++ V++ + + + IL G+E GR +ADV+ G+ NP G+LP T+
Sbjct: 491 KKVIVLLNIGSPVEVVSWRD---LVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTF 547
Query: 598 YN--GDYVQMLPLTSMPLRPVDS-----------LGYPGRTYKFYNGPTLYPFGYGLSYT 644
D P + P P D+ +GY R Y + Y FGYGLSYT
Sbjct: 548 PRDYSDV----PSWTFPGEPKDNPQKVVYEEDIYVGY--RYYDTFGVEPAYEFGYGLSYT 601
Query: 645 QFKYNLLSFTKTIQVNLNKLQHCRNLNYTSDASKTRCPGVLVNDLRCDDYFEFKVDFQNV 704
F+Y+ L+ + + + +N
Sbjct: 602 TFEYSDLNVSFD-----------------------------------GETLRVQYRIENT 626
Query: 705 GSTDGSDVVIVYSKPPAEIAATYIKQVIGFQRV-FVRAGRNKRIKFVFNACKSLNIVDYA 763
G G +V VY K P +++ F + + G ++ + + L +
Sbjct: 627 GGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV-RDLASFN-G 684
Query: 764 ANTLLPAGEHTIFVGN 779
++ AGE+ + VG
Sbjct: 685 EEWVVEAGEYEVRVGA 700
|
| >3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 | Back alignment and structure |
|---|
| >1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 | Back alignment and structure |
|---|
| >3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 | Back alignment and structure |
|---|
| >3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 | Back alignment and structure |
|---|
| >3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 | Back alignment and structure |
|---|
| >3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Length = 340 | Back alignment and structure |
|---|
| >3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Length = 351 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 792 | |||
| 3abz_A | 845 | Beta-glucosidase I; glycoside hydrolase family3 be | 100.0 | |
| 3zyz_A | 713 | Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1 | 100.0 | |
| 2x41_A | 721 | Beta-glucosidase; hydrolase, TIM barrel fold, fibr | 100.0 | |
| 1x38_A | 602 | Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai | 100.0 | |
| 3rrx_A | 822 | EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( | 100.0 | |
| 3bmx_A | 642 | Uncharacterized lipoprotein YBBD; beta-N-hexosamin | 100.0 | |
| 3sql_A | 535 | Glycosyl hydrolase family 3; structural genomics, | 100.0 | |
| 3tev_A | 351 | Glycosyl hyrolase, family 3; PSI-biology, midwest | 100.0 | |
| 4gvf_A | 349 | Beta-hexosaminidase; TIM-barrel, hydrolase; HET: N | 100.0 | |
| 4g6c_A | 348 | Beta-hexosaminidase 1; ssgcid, niaid, structural g | 100.0 | |
| 2oxn_A | 340 | Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O | 100.0 | |
| 3idu_A | 127 | Uncharacterized protein; all beta-protein, structu | 96.92 | |
| 2l0d_A | 114 | Cell surface protein; structural genomics, northea | 96.03 | |
| 2kut_A | 122 | Uncharacterized protein; structural genomics, PSI- | 95.34 | |
| 3isy_A | 120 | Bsupi, intracellular proteinase inhibitor; intrace | 91.33 | |
| 2x3c_A | 343 | Toxic extracellular endopeptidase; hydrolase; 1.99 | 86.77 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 86.31 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 83.79 | |
| 4ep8_B | 101 | Urease subunit beta; alpha-beta barrel, nickel met | 83.77 | |
| 2e6j_A | 112 | Hydin protein; PAPD, structural genomics, NPPSFA, | 81.12 |
| >3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-146 Score=1313.82 Aligned_cols=633 Identities=27% Similarity=0.459 Sum_probs=547.1
Q ss_pred hHHHHHHHhcCCHHHHHhhhcC----cccCCCCCCCCchhhhhhhcccccccCCccccCCCCCCcccCchHhHhhhcCCH
Q 038581 62 SIRVKDLVSRMTLDEKVQQLGD----FAHGVPRLGLPQYEWWSEALHGVSNVGPGTHFDDVIPGATSFPTVILTTASFNE 137 (792)
Q Consensus 62 ~~r~~~ll~~MTleEKv~ql~~----~~~~~~rlgip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~~l~At~d~ 137 (792)
+.|+++||++||+|||++||.+ ...+++|+|||.+ ++.|++||+. +.++.. ..++|.||++++||||||+
T Consensus 3 ~~r~~~ll~~mTleEKi~~l~g~~~~~~~~~~rlgiP~l-~~~D~~~G~~----~~~~~~-~~~~t~fP~~~~laat~d~ 76 (845)
T 3abz_A 3 KFDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAV-RVSDGPNGIR----GTKFFD-GVPSGCFPNGTGLASTFDR 76 (845)
T ss_dssp CCCHHHHHHHCCHHHHHHHTBCSSSSBCCCBGGGTBCCC-BEEECTTSCC----CSCSTT-CCCBCCCCCHHHHHHTCCH
T ss_pred HHHHHHHHHcCCHHHHHHHhcCCCccccccCcccCCCCE-EEEecCCCee----eeeccC-CCCcCcCcCHHHHHhcCCH
Confidence 4689999999999999999986 3567899999998 5789999975 122211 1248999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCccee-eccccccCCCCCCCcccCCCCCChHHHHHHHHHHHHHhccCcCCCCcccCCC
Q 038581 138 SLWKKIGQAVSTEARAMYNLGRAGLTY-WSPNINVARDPRWGRITETPGEDPFVVGRYAVNYVRGLQDVEGHENATDLNS 216 (792)
Q Consensus 138 ~l~~~~g~~~g~E~~a~~~~g~~Gi~~-~aP~~dv~r~p~~gr~~e~fgeDP~lv~~~a~a~v~G~Q~~~g~~~~~~~~~ 216 (792)
+|++++|+++|+|+|++ |+|+ |||++||.|||+|||++|+|||||+|+++|+.|+|+|||+. |
T Consensus 77 ~l~~~~g~~~g~E~ra~------Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~-g--------- 140 (845)
T 3abz_A 77 DLLETAGKLMAKESIAK------NAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE-G--------- 140 (845)
T ss_dssp HHHHHHHHHHHHHHHHT------TCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT-T---------
T ss_pred HHHHHHHHHHHHHHHHc------CCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC-C---------
Confidence 99999999999999999 8898 99999999999999999999999999999999999999998 7
Q ss_pred CCCeeeEeecccccCCCCCCCCCcceeecccCCHHHHHHhcchhhHHhHhcCCcceeeeeccccCCcccccCHHHHHHhh
Q 038581 217 RPLKVSSCCKHYAAYDVDNWKGVDRYHFDARVTEQDMEETFLRPFEMCVKEGDASSVMCSYNRVNGIPSCADPKLLNQTV 296 (792)
Q Consensus 217 ~~~~V~a~~KHFpg~g~~~~~~~~~~~~~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lL 296 (792)
|++|+|||||||++. .|...++.+++++|+|+||+||+++|+++.+.+||||||++||+|||+|+++|++||
T Consensus 141 ----V~a~~KHFpg~g~e~----~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lL 212 (845)
T 3abz_A 141 ----IAATVKHFVCNDLED----QRFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDIL 212 (845)
T ss_dssp ----CBCEEEEETTCCCCT----TTTTCEEECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCC
T ss_pred ----eeEEeeccccCCccc----CCccccCCCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHH
Confidence 999999999998753 455567789999999999999999997434669999999999999999999999999
Q ss_pred hcccCCceEEEccchhhHHhhhccccccCCHHHHHHHHHHcCcCccCC-c--cch-hhHHHHHhcCC-CCHHHHHhHHHH
Q 038581 297 RGEWDLHGYIVADCDSIQVMVDNHKFLADSKEDAVAQTLKAGLDLDCG-Q--YYT-NFTGNAVQQGK-VKETDIDKSLKY 371 (792)
Q Consensus 297 R~e~gf~G~VvSD~~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~-~--~~~-~~l~~av~~G~-i~~~~ld~av~R 371 (792)
|+||||+|+|||||++|. ++++|++||+||+|+ + ++. +.|.+||++|+ |++++||+||+|
T Consensus 213 R~e~GF~G~VvSD~~~~~---------------~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~R 277 (845)
T 3abz_A 213 RDEWKWDGMLMSDWFGTY---------------TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQ 277 (845)
T ss_dssp CCCTCCCSEEECCTTCCC---------------CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHH
T ss_pred hhccCCCeEEEcccccHH---------------HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHH
Confidence 999999999999998753 247899999999996 2 223 38999999999 999999999999
Q ss_pred HHHHHHHhc----CCCCCCcccCCCcccCCCHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCceEEEEccCccchhhhc
Q 038581 372 LYTVLMRLG----FFDGSPQYVSLGKQDICSDENIELAAEAAREGIVLLKNDQNTLPLNSAKVKTVAVVGPHANATVAMI 447 (792)
Q Consensus 372 iL~~k~~~G----lf~~~p~~~~~~~~~v~~~~~~~la~~~A~esiVLLKN~~~~LPL~~~~~~kIaviG~~a~~~~~~~ 447 (792)
||++|+++| +|+. | +.......+++++|+++|+++|+||||||||++++|||++ .+||+||||+|+....++
T Consensus 278 IL~~k~~~g~l~~~~~~-p-~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~G 353 (845)
T 3abz_A 278 VLKMIKFVVDNLEKTGI-V-ENGPESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSG 353 (845)
T ss_dssp HHHHHHHHHHTHHHHCC-C-TTCCCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSC
T ss_pred HHHHHHHhCCccccccC-C-ccCccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccC
Confidence 999999999 9983 3 3332223478999999999999999999999999999986 469999999999887666
Q ss_pred CcccC-CCCccCChhhhhcccc--eEEEeeccCCc------------------------------------c--------
Q 038581 448 GNYAG-IPCRYMSPIAGFSGYA--NVTYKTGCDDV------------------------------------A-------- 480 (792)
Q Consensus 448 G~~~g-~~~~~~t~~~gl~~~~--~~~y~~g~~~~------------------------------------~-------- 480 (792)
|++.. .+.+.+||++||+++. .+.|..||... .
T Consensus 354 ggs~~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~ 433 (845)
T 3abz_A 354 GGSASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFH 433 (845)
T ss_dssp BSTTCCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSE
T ss_pred CCccCcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCccccccee
Confidence 66554 5778899999998764 46666665200 0
Q ss_pred --------------------------------------------------------------------------------
Q 038581 481 -------------------------------------------------------------------------------- 480 (792)
Q Consensus 481 -------------------------------------------------------------------------------- 480 (792)
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~ 513 (845)
T 3abz_A 434 VTKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTK 513 (845)
T ss_dssp EEEECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBC
T ss_pred eeeccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcc
Confidence
Q ss_pred -------------------c------------------------CC-cchHHHHHHHhhcCCEEEEEEecCCCcccccCC
Q 038581 481 -------------------C------------------------KS-NNSIFAASEAAKTADATIILAGLDLSVEAESLD 516 (792)
Q Consensus 481 -------------------~------------------------~~-~~~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~D 516 (792)
+ .+ ...+++|+++|++||+||||+|.+..+++||.|
T Consensus 514 ~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~D 593 (845)
T 3abz_A 514 ERTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYD 593 (845)
T ss_dssp CEEEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBC
T ss_pred cceeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCC
Confidence 0 00 124678999999999999999999999999999
Q ss_pred CCCCCCChhhHHHHHHHHHhcCCCEEEEEeCCceeecccccccCCccEEEEccCCCchhHHHHHHHHhCCCCCCCCCCee
Q 038581 517 REDLWLPGYQTQLINQVAEVAKGPVILVIMSAGGVDIAFAETNTNIKAILWAGYPGEEGGRAIADVVFGKFNPGGRLPIT 596 (792)
Q Consensus 517 r~~l~Lp~~q~~Li~~va~~~~kpvVvVl~~g~P~~l~~~~~~~~v~Ail~a~~pG~e~g~AlAdVL~G~~nPsGkLPvT 596 (792)
|.+|.||+.|.+||++|+++ ++|||||+++|+|++|+|+. +++|||++||||||+|+||||||||++|||||||+|
T Consensus 594 R~~l~LP~~Q~~LI~aV~a~-~~~tVVVl~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T 669 (845)
T 3abz_A 594 RENMDLPKRTNELVRAVLKA-NPNTVIVNQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLS 669 (845)
T ss_dssp CSSSCCCTTHHHHHHHHHHH-CSCEEEEEECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSC
T ss_pred cccccCCHHHHHHHHHHHHh-CCCEEEEEeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCcee
Confidence 99999999999999999986 56899999999999999983 799999999999999999999999999999999999
Q ss_pred cccCCccCCCCCcCCCCCC------CCCCCCCCccccccC---CCCcccccCCCCCCceeee--ccccccceeccccccc
Q 038581 597 WYNGDYVQMLPLTSMPLRP------VDSLGYPGRTYKFYN---GPTLYPFGYGLSYTQFKYN--LLSFTKTIQVNLNKLQ 665 (792)
Q Consensus 597 ~~~~~~~~~~p~~~~~~~~------~~~~~~~g~~Yr~~~---~~~~ypFG~GLSYTtF~ys--~l~~~~~~~~~~~~~~ 665 (792)
| |++. +|+|.++. +.. +.+..| .+||||+ .+|+||||||||||||+|+ ++++ +
T Consensus 670 ~-p~~~-~d~P~~~~-~~~~~g~~~y~eg~~--vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~v------~----- 733 (845)
T 3abz_A 670 W-PFKL-QDNPAFLN-FKTEFGRVIYGEDIF--VGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFKV------T----- 733 (845)
T ss_dssp B-CSSG-GGSTTTTS-CSCBTTEEECTTTTC--CTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEEE------C-----
T ss_pred e-eCch-hhCCcccc-CCCCCCceeccCCcc--CCCcchhcCCCceeecccCCCcceeEEEecccccc------c-----
Confidence 8 5665 56886532 111 112223 3699997 5799999999999999999 8872 1
Q ss_pred ccccccccCCCccCCCCcccccCCCCCceEEEEEEEEecC-CCCcceeEEEeeeCCCCcchhhhhhhccccccccCCCCE
Q 038581 666 HCRNLNYTSDASKTRCPGVLVNDLRCDDYFEFKVDFQNVG-STDGSDVVIVYSKPPAEIAATYIKQVIGFQRVFVRAGRN 744 (792)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG-~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes 744 (792)
++.++|+|+||||| +++|+||||||+++|.+++.+|.|+||||+||+|+||||
T Consensus 734 --------------------------~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes 787 (845)
T 3abz_A 734 --------------------------DDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEPGEK 787 (845)
T ss_dssp --------------------------SSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEECTTCE
T ss_pred --------------------------CCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEECCCCE
Confidence 23799999999999 999999999999999999999999999999999999999
Q ss_pred EEEEEEec-cCCCeeEEeCC-CCEEEeCeEEEEEEeCCceeEEEEEee
Q 038581 745 KRIKFVFN-ACKSLNIVDYA-ANTLLPAGEHTIFVGNGGVSFPIHLNF 790 (792)
Q Consensus 745 ~~V~~~l~-~~~~ls~~d~~-~~~~~~~G~y~i~vG~ss~~~~~~~~~ 790 (792)
++|+|+|+ . ++|++||.. ++|++|+|+|+|+||.||.+++++.++
T Consensus 788 ~~V~~~l~~~-~~l~~~d~~~~~~~~e~G~y~v~vG~ss~di~l~~~~ 834 (845)
T 3abz_A 788 KTVNIDLELK-DAISYFNEELGKWHVEAGEYLVSVGTSSDDILSVKEF 834 (845)
T ss_dssp EEEEEEEEHH-HHHCEEETTTTEEEECSEEEEEEEESSTTCEEEEEEE
T ss_pred EEEEEEeCCh-HHeeEEecCCCeEEEcCCEEEEEEECCCCCceeEEEE
Confidence 99999999 8 799999996 789999999999999999777665544
|
| >3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A* | Back alignment and structure |
|---|
| >2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* | Back alignment and structure |
|---|
| >1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* | Back alignment and structure |
|---|
| >3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A | Back alignment and structure |
|---|
| >3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* | Back alignment and structure |
|---|
| >3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* | Back alignment and structure |
|---|
| >3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A* | Back alignment and structure |
|---|
| >4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A* | Back alignment and structure |
|---|
| >2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A | Back alignment and structure |
|---|
| >3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A | Back alignment and structure |
|---|
| >2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans} | Back alignment and structure |
|---|
| >2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens} | Back alignment and structure |
|---|
| >3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} | Back alignment and structure |
|---|
| >2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A | Back alignment and structure |
|---|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
| >4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ... | Back alignment and structure |
|---|
| >2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 792 | ||||
| d1x38a1 | 388 | c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te | 3e-52 | |
| d1x38a2 | 214 | c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, | 9e-28 | |
| d1tr9a_ | 330 | c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio chol | 4e-10 |
| >d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: NagZ-like domain: Beta-D-glucan exohydrolase, N-terminal domain species: Barley (Hordeum vulgare) [TaxId: 4513]
Score = 184 bits (468), Expect = 3e-52
Identities = 87/394 (22%), Positives = 155/394 (39%), Gaps = 45/394 (11%)
Query: 53 LFCDSSLPYSIRVKDLVSRMTLDEKVQQLG---------------------DFAHGVPRL 91
L+ D++ P RV DL+ RMTL EK+ Q+ VPR
Sbjct: 4 LYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRK 63
Query: 92 GLPQYEWWS------EALHGVSNVGPGTHFDDVIPG------ATSFPTVILTTASFNESL 139
G EW +A P + D + G AT FP + A+ + L
Sbjct: 64 GATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYL 123
Query: 140 WKKIGQAVSTEARAMYNLGRAGLTYWSPNINVARDPRWGRITETPGEDPFVVGRYAVNYV 199
K+IG+A + E RA ++P I V RDPRWGR E+ ED +V
Sbjct: 124 VKRIGEATALEVRATGIQ-----YAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIP 178
Query: 200 RGLQD-VEGHENATDLNSRPLKVSSCCKHYAAYDVDNWKGVDRYHFDARVTEQDMEETFL 258
D + + + KV++C KH+ + + + + +
Sbjct: 179 GLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVD---GINENNTIINREGLMNIHM 235
Query: 259 RPFEMCVKEGDASSVMCSYNRVNGIPSCADPKLLNQTVRGEWDLHGYIVADCDSIQVMVD 318
++ + +G ++ VM SY+ NG+ A+ L+ ++ G++++D + I +
Sbjct: 236 PAYKNAMDKGVST-VMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITT 294
Query: 319 NHKF-LADSKEDAVAQTLKAGLDLDCGQYYTNFTGNAVQQGKVKETDIDKSLKYLYTVLM 377
+ S + ++ L + + Q + + V G + + ID ++ + V
Sbjct: 295 PAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKF 354
Query: 378 RLGFFDGSPQYVSLGKQDICSDENIELAAEAARE 411
+G F+ P + + E+ +LA EAAR+
Sbjct: 355 TMGLFEN-PYADPAMAEQLGKQEHRDLAREAARK 387
|
| >d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 | Back information, alignment and structure |
|---|
| >d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Length = 330 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 792 | |||
| d1x38a1 | 388 | Beta-D-glucan exohydrolase, N-terminal domain {Bar | 100.0 | |
| d1tr9a_ | 330 | Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: | 100.0 | |
| d1x38a2 | 214 | Beta-D-glucan exohydrolase, C-terminal domain {Bar | 100.0 | |
| d1w8oa1 | 103 | Sialidase, "linker" domain {Micromonospora viridif | 96.61 | |
| d1ejxb_ | 101 | Urease, beta-subunit {Klebsiella aerogenes [TaxId: | 86.97 | |
| d2vzsa2 | 122 | Exochitosanase CsxA, domains 2, 4 and 5 {Amycolato | 85.41 | |
| d4ubpb_ | 122 | Urease, beta-subunit {Bacillus pasteurii [TaxId: 1 | 82.87 | |
| d2q3za2 | 114 | Transglutaminase, two C-terminal domains {Human (H | 82.61 |
| >d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: NagZ-like domain: Beta-D-glucan exohydrolase, N-terminal domain species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=100.00 E-value=7.3e-71 Score=612.89 Aligned_cols=335 Identities=27% Similarity=0.460 Sum_probs=273.4
Q ss_pred Cc-ccCCCCChhHHHHHHHhcCCHHHHHhhhcCc---------------------ccCCCCCCCCchh------------
Q 038581 52 FL-FCDSSLPYSIRVKDLVSRMTLDEKVQQLGDF---------------------AHGVPRLGLPQYE------------ 97 (792)
Q Consensus 52 ~~-~~d~~~~~~~r~~~ll~~MTleEKv~ql~~~---------------------~~~~~rlgip~~~------------ 97 (792)
.| |+||++|+++||++||++||||||||||++. ...+++++.|...
T Consensus 2 ~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~~ 81 (388)
T d1x38a1 2 YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKAC 81 (388)
T ss_dssp CCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHHHHCCCHHHHHhhhcccccccCCHHHHHhccccceeecCCcccCCCCCHHHHHHHHHHHHHHH
Confidence 35 9999999999999999999999999999742 1124444444332
Q ss_pred ----------hhhhhcccccccCCccccCCCCCCcccCchHhHhhhcCCHHHHHHHHHHHHHHHHHhhccCCCccee-ec
Q 038581 98 ----------WWSEALHGVSNVGPGTHFDDVIPGATSFPTVILTTASFNESLWKKIGQAVSTEARAMYNLGRAGLTY-WS 166 (792)
Q Consensus 98 ----------~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~~l~At~d~~l~~~~g~~~g~E~~a~~~~g~~Gi~~-~a 166 (792)
+..|..+|+. . ..+.|.||+++++|||||++|++++|+++|+|+|++ |+|+ ||
T Consensus 82 ~~~~~giPlli~~D~e~G~~--------~--~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~------Gin~~~a 145 (388)
T d1x38a1 82 MSTRLGIPMIYGIDAVHGQN--------N--VYGATIFPHNVGLGATRDPYLVKRIGEATALEVRAT------GIQYAFA 145 (388)
T ss_dssp HTSSSCCCCEEEECCSSSST--------T--STTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT------TCCEECC
T ss_pred HhccCCCCceeecccccCcc--------c--ccccccchhhhhccccCCHHHHHHHHHHhhHHHHhc------CCccccC
Confidence 2333333321 1 125789999999999999999999999999999999 8998 99
Q ss_pred cccccCCCCCCCcccCCCCCChHHHHHHHHHHHHHhccCcCCC--CcccCCCCCCeeeEeecccccCCCCCCCCCcceee
Q 038581 167 PNINVARDPRWGRITETPGEDPFVVGRYAVNYVRGLQDVEGHE--NATDLNSRPLKVSSCCKHYAAYDVDNWKGVDRYHF 244 (792)
Q Consensus 167 P~~dv~r~p~~gr~~e~fgeDP~lv~~~a~a~v~G~Q~~~g~~--~~~~~~~~~~~V~a~~KHFpg~g~~~~~~~~~~~~ 244 (792)
|++||.|||+|||++|+|||||+++++|+. +|.++|+..+.. .+.+...+..+|+||+|||||||.+.. ++...
T Consensus 146 Pv~Dv~~~p~~gr~~et~geDp~l~~~~~~-~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~---~~~~~ 221 (388)
T d1x38a1 146 PCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVD---GINEN 221 (388)
T ss_dssp CBCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGG---GCTTC
T ss_pred CcccccccccccccccCccCCHHHHHHHHh-hhhhhhchhhhhhcccccccccccCcceeeeeeecCCcccc---Ccccc
Confidence 999999999999999999999999999965 788887641100 000011123469999999999985432 22333
Q ss_pred cccCCHHHHHHhcchhhHHhHhcCCcceeeeeccccCCcccccCHHHHHHhhhcccCCceEEEccchhhHHhhhcccccc
Q 038581 245 DARVTEQDMEETFLRPFEMCVKEGDASSVMCSYNRVNGIPSCADPKLLNQTVRGEWDLHGYIVADCDSIQVMVDNHKFLA 324 (792)
Q Consensus 245 ~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gf~G~VvSD~~~~~~~~~~~~~~~ 324 (792)
.+.+++++|+|+||+||+.+|++|.. +|||+||.+||+|+|.|+++|+++||+||||+|+|||||++|+++.. ++.
T Consensus 222 ~~~i~~~~l~~~~l~pf~~~i~~g~~-~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~---~~~ 297 (388)
T d1x38a1 222 NTIINREGLMNIHMPAYKNAMDKGVS-TVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITT---PAG 297 (388)
T ss_dssp EECCCHHHHHHHTSHHHHHHHHTTCC-EEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSS---STT
T ss_pred ccchhHHHHHHHhhhhhHHHHhhccc-cccccccccCCccccCCHHHHHHHHHhccCCCceeecchhhcccccc---ccC
Confidence 45689999999999999999998865 99999999999999999999999999999999999999999999865 334
Q ss_pred CCHHHHHHHHHHcCcCccCCc----cchhhHHHHHhcCCCCHHHHHhHHHHHHHHHHHhcCCCCCCcccCCC-cccCCCH
Q 038581 325 DSKEDAVAQTLKAGLDLDCGQ----YYTNFTGNAVQQGKVKETDIDKSLKYLYTVLMRLGFFDGSPQYVSLG-KQDICSD 399 (792)
Q Consensus 325 ~~~~ea~~~al~AG~D~~~~~----~~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~Glf~~~p~~~~~~-~~~v~~~ 399 (792)
....++++.+++||+||+|.+ .+.+.|.+||++|+|+++|||+||+|||++|+++|||| + ||.+.. ...++++
T Consensus 298 ~~~~~~~~~a~~ag~d~~~~~~~~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd-~-p~~~~~~~~~i~~~ 375 (388)
T d1x38a1 298 SDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-N-PYADPAMAEQLGKQ 375 (388)
T ss_dssp TTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-C-CSCCGGGGGGTTCH
T ss_pred CcHHHHHHHHHhcCCCeecCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCC-C-CCCChhhhhhcCCH
Confidence 567788999999999999863 34578899999999999999999999999999999999 4 354432 3468899
Q ss_pred HHHHHHHHHHHhh
Q 038581 400 ENIELAAEAAREG 412 (792)
Q Consensus 400 ~~~~la~~~A~es 412 (792)
+|+++|+++|+||
T Consensus 376 ~h~~~a~~aA~~S 388 (388)
T d1x38a1 376 EHRDLAREAARKS 388 (388)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999997
|
| >d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
| >d1ejxb_ b.85.3.1 (B:) Urease, beta-subunit {Klebsiella aerogenes [TaxId: 28451]} | Back information, alignment and structure |
|---|
| >d2vzsa2 b.1.4.1 (A:778-899) Exochitosanase CsxA, domains 2, 4 and 5 {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d4ubpb_ b.85.3.1 (B:) Urease, beta-subunit {Bacillus pasteurii [TaxId: 1474]} | Back information, alignment and structure |
|---|
| >d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]} | Back information, alignment and structure |
|---|