Citrus Sinensis ID: 038598

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
EWFNADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKLPPPPSDLPKC
ccccccHHHHHHHHHHcccccccccccccccccccccccccccEEEEEEEcccEEEEEEEEccccccEEEEEcccEEEEEEEcccccccEEEEEEEEccccEEEEEEEcccccccccEEEEEEcccccccccccccEEEEEEEcccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccEEEEEEEccccccccccccccccccEEEEEEcccccccccHHHHHHHHHccccccccccccccccccccccccccccEEEEcccEEEEccccccccccccccccccEEEEEcccccccccccccccccccccccEEEEccccEEEEEEEccccEEEEEHHccHHHHHHcccEEEEEEccccccccccccccccccc
ccccccHHHHHHHHHHcccccEccHHHcccccEcccccccccccccEEEccccEEEEEEEEcccccEEEEEEccEcEEEEEEccEEEEEEEEcEEEEccccEEEEEEEccccccccEEEEEEEEcccccccccccEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccEEEEEEEccccccccccccccccccEEEEEEcccEEccccHHHHHHHHHcccccccccccccccccEEcccccccccEEEEEccEEEEEEEEccccccEEEccEEEEEEEcccccccHHHHHHHcccccccEEcEEEEccccccEEEEEccccEEEEEEEccHHHHccccEEEEEEcHHHHccccccccccccccc
EWFNADPEAIINqslqtgngpnvseaytfnglpgptyncsakdtyklkvkpgkTYMLRLINTALNDELFFSIANHTLTVVEadaiyvkpfetnilviapgqttnvllktnpnppnasffmlarpyftgmgtfdnSTVAAILEyeapsqdnsfrnrtlfkpslpaindtnfvaNFSSKFRslanaqfpanvpqtvdKRFFFTVslganpcpknqtcqgpngtKFAAAVNNVSFALPSTALLQSYFFAkskgvytadfpqfplhpfnytgtppnntfvsngtkaldtsilgaeshplhlhgyNVYVVgqgfgnfdpkndpkkfnlidpverntvgvpsggWVAIRFladnpgvwfmhcHFDVHLSWGLRMAWIVLdgelpnqklppppsdlpkc
EWFNADPEAIINqslqtgngpnVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEapsqdnsfRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGelpnqklppppsdlpkc
EWFNADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKLPPPPSDLPKC
************************EAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEA******FRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDG*****************
EWFNADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEAPS***********KPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGEL****LPPPPSDLPKC
EWFNADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKL**********
*WFNADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKLPPPPSDL**C
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EWFNADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKLPPPPSDLPKC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query392 2.2.26 [Sep-21-2011]
O81081573 Laccase-2 OS=Arabidopsis yes no 0.994 0.680 0.700 1e-170
Q9FJD5577 Laccase-17 OS=Arabidopsis no no 1.0 0.679 0.705 1e-170
Q0DHL2574 Laccase-12/13 OS=Oryza sa no no 1.0 0.682 0.706 1e-165
Q5N9X2579 Laccase-4 OS=Oryza sativa no no 1.0 0.677 0.682 1e-164
Q10ND7578 Laccase-10 OS=Oryza sativ no no 0.992 0.673 0.661 1e-158
Q0DHL5540 Putative laccase-11 OS=Or no no 0.997 0.724 0.652 1e-155
Q5N9W4547 Putative laccase-5 OS=Ory no no 0.943 0.676 0.647 1e-141
Q0IQU1564 Laccase-22 OS=Oryza sativ no no 0.971 0.675 0.504 1e-116
Q9LMS3581 Laccase-1 OS=Arabidopsis no no 0.997 0.672 0.489 1e-112
O80434558 Laccase-4 OS=Arabidopsis no no 0.969 0.681 0.493 1e-109
>sp|O81081|LAC2_ARATH Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1 Back     alignment and function desciption
 Score =  599 bits (1545), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 285/407 (70%), Positives = 332/407 (81%), Gaps = 17/407 (4%)

Query: 1   EWFNADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLI 60
           EWFNADP+A++ Q+LQTG GPN S+A+TFNGLPGP YNCS KDTYKL VKPGKTY+LRLI
Sbjct: 169 EWFNADPQAVVQQALQTGAGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLI 228

Query: 61  NTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFM 120
           N ALNDELFF+IANHTLTVVEADA YVKPF+TNI+++ PGQTTNVLLKT P  PNA+F+M
Sbjct: 229 NAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPIYPNATFYM 288

Query: 121 LARPYFTGMGTFDNSTVAAILEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRS 180
           LARPYFTG GT DN+TVA IL+Y+      S +N ++ KPSLP IN T++ ANF+  FRS
Sbjct: 289 LARPYFTGQGTIDNTTVAGILQYQ--HHTKSSKNLSIIKPSLPPINSTSYAANFTKMFRS 346

Query: 181 LANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGP-NGTKFAAAVNNVSFALP-STA 238
           LA++ FPANVP+ VDK++FF + LG NPCPKNQTCQGP N TKFAA++NNVSF LP  T+
Sbjct: 347 LASSTFPANVPKVVDKQYFFAIGLGTNPCPKNQTCQGPTNTTKFAASINNVSFILPNKTS 406

Query: 239 LLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKAL-------------DT 285
           LLQSYF  KSK V+  DFP  P+ PFNYTGTPPNNT VS GTK +              T
Sbjct: 407 LLQSYFVGKSKNVFMTDFPTAPIIPFNYTGTPPNNTMVSRGTKVVVLKYKTTVELVLQGT 466

Query: 286 SILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFL 345
           SILG E+HP+HLHG+N YVVGQGFGNF+P  DPK +NL+DPVERNT+ +PSGGWVAIRFL
Sbjct: 467 SILGIEAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFL 526

Query: 346 ADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKLPPPPSDLPKC 392
           ADNPGVW MHCH ++HLSWGL MAW+VLDG+LPNQKL PPPSD PKC
Sbjct: 527 ADNPGVWLMHCHIEIHLSWGLTMAWVVLDGDLPNQKLLPPPSDFPKC 573
Lignin degradation and detoxification of lignin-derived products (By similarity). Required for root elongation in dehydration conditions.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: 2
>sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 Back     alignment and function description
>sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1 Back     alignment and function description
>sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 Back     alignment and function description
>sp|Q10ND7|LAC10_ORYSJ Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1 Back     alignment and function description
>sp|Q0DHL5|LAC11_ORYSJ Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2 Back     alignment and function description
>sp|Q5N9W4|LAC5_ORYSJ Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1 Back     alignment and function description
>sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 Back     alignment and function description
>sp|Q9LMS3|LAC1_ARATH Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1 Back     alignment and function description
>sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
224104399 576 predicted protein [Populus trichocarpa] 0.984 0.670 0.804 0.0
255582055 576 laccase, putative [Ricinus communis] gi| 0.994 0.677 0.758 1e-179
224060169 580 predicted protein [Populus trichocarpa] 1.0 0.675 0.748 1e-179
224087431 580 laccase 110b [Populus trichocarpa] gi|22 1.0 0.675 0.746 1e-179
224057692 581 predicted protein [Populus trichocarpa] 1.0 0.674 0.750 1e-179
147789066 559 hypothetical protein VITISV_005802 [Viti 1.0 0.701 0.738 1e-178
359479021 585 PREDICTED: laccase-17-like [Vitis vinife 1.0 0.670 0.738 1e-178
356566454 1750 PREDICTED: uncharacterized protein LOC10 1.0 0.224 0.739 1e-177
224128342 581 predicted protein [Populus trichocarpa] 1.0 0.674 0.738 1e-177
1621463 585 laccase [Liriodendron tulipifera] 1.0 0.670 0.724 1e-177
>gi|224104399|ref|XP_002313424.1| predicted protein [Populus trichocarpa] gi|222849832|gb|EEE87379.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/405 (80%), Positives = 346/405 (85%), Gaps = 19/405 (4%)

Query: 1   EWFNADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLI 60
           EWFNADPEA+I Q+LQTG GPNVSEAYTFNGL GP YNCSA +TYKLKVKPGKTY+LRLI
Sbjct: 178 EWFNADPEAVIRQALQTGGGPNVSEAYTFNGLTGPLYNCSANNTYKLKVKPGKTYLLRLI 237

Query: 61  NTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFM 120
           N ALNDELFFSIANHT TVVE DA YVKPFETN+LVI PGQTTNVLLKT P  PNASF+M
Sbjct: 238 NAALNDELFFSIANHTFTVVEVDATYVKPFETNLLVITPGQTTNVLLKTKPIAPNASFYM 297

Query: 121 LARPYFTGMGTFDNSTVAAILEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRS 180
           LARPYFTG GTFDN+TVA ILEYE  S      N T FKP+LP IN TN VANF+ K RS
Sbjct: 298 LARPYFTGQGTFDNTTVAGILEYETSS------NSTTFKPTLPPINATNAVANFTRKLRS 351

Query: 181 LANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALL 240
           LAN QFP NVPQTVDK+FFFTV LG NPCPKNQTCQGPNGTKF+A+VNN+S ALPSTALL
Sbjct: 352 LANFQFPVNVPQTVDKKFFFTVGLGNNPCPKNQTCQGPNGTKFSASVNNISMALPSTALL 411

Query: 241 QSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKAL-------------DTSI 287
           QSYFF KS GVYT+DFP  PLHPFNYTGTPPNNTFV+NGTK +              TSI
Sbjct: 412 QSYFFKKSNGVYTSDFPSSPLHPFNYTGTPPNNTFVTNGTKLIVLPFNTNVEVVMQGTSI 471

Query: 288 LGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLAD 347
           LGAESHPLHLHG+N YVVG+GFGNFDP NDPK FNL+DPVERNTVGVPSGGWVAIRF AD
Sbjct: 472 LGAESHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPSGGWVAIRFHAD 531

Query: 348 NPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKLPPPPSDLPKC 392
           NPGVWFMHCHFDVHLSWGLRMAWIVLDG LP+QKLPPPPSDLPKC
Sbjct: 532 NPGVWFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC 576

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255582055|ref|XP_002531824.1| laccase, putative [Ricinus communis] gi|223528520|gb|EEF30544.1| laccase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224060169|ref|XP_002300066.1| predicted protein [Populus trichocarpa] gi|222847324|gb|EEE84871.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224087431|ref|XP_002308164.1| laccase 110b [Populus trichocarpa] gi|222854140|gb|EEE91687.1| laccase 110b [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224057692|ref|XP_002299296.1| predicted protein [Populus trichocarpa] gi|222846554|gb|EEE84101.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147789066|emb|CAN60348.1| hypothetical protein VITISV_005802 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359479021|ref|XP_003632204.1| PREDICTED: laccase-17-like [Vitis vinifera] gi|297746168|emb|CBI16224.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356566454|ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max] Back     alignment and taxonomy information
>gi|224128342|ref|XP_002329138.1| predicted protein [Populus trichocarpa] gi|222869807|gb|EEF06938.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|1621463|gb|AAB17192.1| laccase [Liriodendron tulipifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
TAIR|locus:2066117573 LAC2 "laccase 2" [Arabidopsis 0.994 0.680 0.700 1.5e-161
TAIR|locus:2143563557 LAC11 "laccase 11" [Arabidopsi 0.964 0.678 0.511 3.9e-108
TAIR|locus:2168128577 LAC17 "laccase 17" [Arabidopsi 0.721 0.490 0.691 9.2e-107
TAIR|locus:2042842558 IRX12 "IRREGULAR XYLEM 12" [Ar 0.969 0.681 0.496 4.6e-105
TAIR|locus:2154518566 LAC16 "laccase 16" [Arabidopsi 0.974 0.674 0.496 6e-103
TAIR|locus:2060879570 LAC3 "laccase 3" [Arabidopsis 0.979 0.673 0.487 6.2e-101
TAIR|locus:2150139558 LAC10 "laccase 10" [Arabidopsi 0.969 0.681 0.484 1e-100
TAIR|locus:2153469565 LAC12 "laccase 12" [Arabidopsi 0.971 0.674 0.481 1.6e-95
TAIR|locus:2182895569 LAC13 "laccase 13" [Arabidopsi 0.987 0.680 0.453 1.3e-93
TAIR|locus:2162677565 TT10 "TRANSPARENT TESTA 10" [A 0.974 0.676 0.426 8.6e-88
TAIR|locus:2066117 LAC2 "laccase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1573 (558.8 bits), Expect = 1.5e-161, P = 1.5e-161
 Identities = 285/407 (70%), Positives = 335/407 (82%)

Query:     1 EWFNADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLI 60
             EWFNADP+A++ Q+LQTG GPN S+A+TFNGLPGP YNCS KDTYKL VKPGKTY+LRLI
Sbjct:   169 EWFNADPQAVVQQALQTGAGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLI 228

Query:    61 NTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFM 120
             N ALNDELFF+IANHTLTVVEADA YVKPF+TNI+++ PGQTTNVLLKT P  PNA+F+M
Sbjct:   229 NAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPIYPNATFYM 288

Query:   121 LARPYFTGMGTFDNSTVAAILEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRS 180
             LARPYFTG GT DN+TVA IL+Y+  ++  S +N ++ KPSLP IN T++ ANF+  FRS
Sbjct:   289 LARPYFTGQGTIDNTTVAGILQYQHHTK--SSKNLSIIKPSLPPINSTSYAANFTKMFRS 346

Query:   181 LANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGP-NGTKFAAAVNNVSFALPS-TA 238
             LA++ FPANVP+ VDK++FF + LG NPCPKNQTCQGP N TKFAA++NNVSF LP+ T+
Sbjct:   347 LASSTFPANVPKVVDKQYFFAIGLGTNPCPKNQTCQGPTNTTKFAASINNVSFILPNKTS 406

Query:   239 LLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKAL-------------DT 285
             LLQSYF  KSK V+  DFP  P+ PFNYTGTPPNNT VS GTK +              T
Sbjct:   407 LLQSYFVGKSKNVFMTDFPTAPIIPFNYTGTPPNNTMVSRGTKVVVLKYKTTVELVLQGT 466

Query:   286 SILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFL 345
             SILG E+HP+HLHG+N YVVGQGFGNF+P  DPK +NL+DPVERNT+ +PSGGWVAIRFL
Sbjct:   467 SILGIEAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFL 526

Query:   346 ADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKLPPPPSDLPKC 392
             ADNPGVW MHCH ++HLSWGL MAW+VLDG+LPNQKL PPPSD PKC
Sbjct:   527 ADNPGVWLMHCHIEIHLSWGLTMAWVVLDGDLPNQKLLPPPSDFPKC 573
GO:0005507 "copper ion binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0046274 "lignin catabolic process" evidence=IEA
GO:0048046 "apoplast" evidence=IEA
GO:0052716 "hydroquinone:oxygen oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009414 "response to water deprivation" evidence=IEP;IMP
TAIR|locus:2143563 LAC11 "laccase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168128 LAC17 "laccase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042842 IRX12 "IRREGULAR XYLEM 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154518 LAC16 "laccase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060879 LAC3 "laccase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150139 LAC10 "laccase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153469 LAC12 "laccase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182895 LAC13 "laccase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2162677 TT10 "TRANSPARENT TESTA 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O81081LAC2_ARATH1, ., 1, 0, ., 3, ., 20.70020.99480.6806yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.10.30.963
3rd Layer1.10.3.20.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
TIGR03389539 TIGR03389, laccase, laccase, plant 0.0
TIGR03388541 TIGR03388, ascorbase, L-ascorbate oxidase, plant t 2e-53
PLN02604566 PLN02604, PLN02604, oxidoreductase 1e-43
pfam00394146 pfam00394, Cu-oxidase, Multicopper oxidase 1e-41
PLN02191574 PLN02191, PLN02191, L-ascorbate oxidase 3e-38
pfam07731135 pfam07731, Cu-oxidase_2, Multicopper oxidase 2e-34
TIGR03390538 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu 2e-23
PLN02168545 PLN02168, PLN02168, copper ion binding / pectinest 4e-22
PLN00044596 PLN00044, PLN00044, multi-copper oxidase-related p 4e-20
PLN02835539 PLN02835, PLN02835, oxidoreductase 1e-14
PLN02792536 PLN02792, PLN02792, oxidoreductase 1e-14
PLN02354552 PLN02354, PLN02354, copper ion binding / oxidoredu 3e-14
PLN02991543 PLN02991, PLN02991, oxidoreductase 5e-12
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 6e-07
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 3e-06
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 9e-06
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 0.002
>gnl|CDD|234194 TIGR03389, laccase, laccase, plant Back     alignment and domain information 
 Score =  610 bits (1575), Expect = 0.0
 Identities = 255/406 (62%), Positives = 308/406 (75%), Gaps = 23/406 (5%)

Query: 1   EWFNADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLI 60
           EW+NAD EA+INQ+ QTG  PNVS+AYT NG PGP YNCS+KDT+KL V+PGKTY+LR+I
Sbjct: 143 EWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRII 202

Query: 61  NTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFM 120
           N ALNDELFF+IANHTLTVVE DA Y KPF+T  +VI PGQTTNVLL  + +P    +FM
Sbjct: 203 NAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQTTNVLLTADQSP--GRYFM 260

Query: 121 LARPYFTGMGTFDNSTVAAILEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRS 180
            ARPY    G FDN+T  AIL+Y+  S      +     P+LPA NDT    NFS+K RS
Sbjct: 261 AARPYMDAPGAFDNTTTTAILQYKGTSN-----SAKPILPTLPAYNDTAAATNFSNKLRS 315

Query: 181 LANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALL 240
           L +AQ+PANVP T+D+R FFT+ LG +PCP N TCQGPNGT+FAA++NN+SF +P+TALL
Sbjct: 316 LNSAQYPANVPVTIDRRLFFTIGLGLDPCPNN-TCQGPNGTRFAASMNNISFVMPTTALL 374

Query: 241 QSYFFAKSKGVYTADFPQFPLHPFNYTGTP-PNNTFVSNGTKAL-------------DTS 286
           Q+++F    GV+T DFP  P   FNYTGT  PNN F +NGTK +             DTS
Sbjct: 375 QAHYF-GISGVFTTDFPANPPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTS 433

Query: 287 ILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLA 346
           ILG+E+HP+HLHGYN +VVG GFGNFDPK DP KFNL+DP ERNTVGVP+GGW AIRF+A
Sbjct: 434 ILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFVA 493

Query: 347 DNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKLPPPPSDLPKC 392
           DNPGVWFMHCH +VH +WGL+MA++V +G+ PNQ L PPPSDLP C
Sbjct: 494 DNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539
>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type Back     alignment and domain information
>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase Back     alignment and domain information
>gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase Back     alignment and domain information
>gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type Back     alignment and domain information
>gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase Back     alignment and domain information
>gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase Back     alignment and domain information
>gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase Back     alignment and domain information
>gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase Back     alignment and domain information
>gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 392
TIGR03389539 laccase laccase, plant. Members of this protein fa 100.0
PLN00044596 multi-copper oxidase-related protein; Provisional 100.0
PLN02792536 oxidoreductase 100.0
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 100.0
PLN02991543 oxidoreductase 100.0
PLN02354552 copper ion binding / oxidoreductase 100.0
PLN02835539 oxidoreductase 100.0
PLN02168545 copper ion binding / pectinesterase 100.0
PLN02604566 oxidoreductase 100.0
PLN02191574 L-ascorbate oxidase 100.0
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 100.0
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 100.0
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 100.0
PRK10965523 multicopper oxidase; Provisional 100.0
PRK10883471 FtsI repressor; Provisional 100.0
COG2132451 SufI Putative multicopper oxidases [Secondary meta 100.0
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 99.97
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 99.95
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.73
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.31
PLN02604 566 oxidoreductase 98.96
TIGR03388 541 ascorbase L-ascorbate oxidase, plant type. Members 98.46
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 98.32
TIGR03389 539 laccase laccase, plant. Members of this protein fa 98.24
PRK10965523 multicopper oxidase; Provisional 97.86
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 97.86
PLN02835 539 oxidoreductase 97.81
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 97.78
PLN02191 574 L-ascorbate oxidase 97.77
PLN02792 536 oxidoreductase 97.75
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 97.7
PLN02354 552 copper ion binding / oxidoreductase 97.69
PRK10883 471 FtsI repressor; Provisional 97.69
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 97.56
PLN02991 543 oxidoreductase 97.52
TIGR03390 538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 97.45
PLN02168 545 copper ion binding / pectinesterase 97.37
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 97.32
PLN00044 596 multi-copper oxidase-related protein; Provisional 97.27
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 96.6
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 96.09
KOG1263 563 consensus Multicopper oxidases [Secondary metaboli 95.86
COG2132451 SufI Putative multicopper oxidases [Secondary meta 95.65
COG4454158 Uncharacterized copper-binding protein [Inorganic 95.16
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 95.1
PRK02888635 nitrous-oxide reductase; Validated 95.09
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 94.79
PRK02710119 plastocyanin; Provisional 94.61
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 94.28
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 94.14
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 93.76
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 92.0
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 88.26
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 87.45
COG4454158 Uncharacterized copper-binding protein [Inorganic 86.55
TIGR0265783 amicyanin amicyanin. Members of this family are am 86.37
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 85.5
PF14344122 DUF4397: Domain of unknown function (DUF4397) 82.9
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 80.18
>TIGR03389 laccase laccase, plant Back     alignment and domain information 
Probab=100.00  E-value=8.7e-71  Score=559.11  Aligned_cols=383  Identities=63%  Similarity=1.133  Sum_probs=289.6

Q ss_pred             CCCCCCHHHHHHHHhcCCCCCCCCceEEEcCCcCCCCCCCCCCccEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEE
Q 038598            1 EWFNADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVV   80 (392)
Q Consensus         1 Dwyh~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~l~id~h~m~VI   80 (392)
                      ||||++..+++...+..+..++.+|++|||||.+..+.|+....+.++|++||+|||||||+|+.+.+.|+||+|+|+||
T Consensus       143 Dw~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VI  222 (539)
T TIGR03389       143 EWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVV  222 (539)
T ss_pred             ccccCCHHHHHHHHHhcCCCCCccceEEECCCcCCCCCCCCCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEE
Confidence            89999999888776665555668899999999877788988778899999999999999999999999999999999999


Q ss_pred             EeCCccccceEEeEEEecCCCeEEEEEEcCCCCCCCceEEEEeccCCCCCcCCCcceEEEEEecCCCCCCCCCCCCccCC
Q 038598           81 EADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEAPSQDNSFRNRTLFKP  160 (392)
Q Consensus        81 a~DG~~v~P~~v~~l~l~pGeRydVlv~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~aiL~y~~~~~~~~~~~~~~~~p  160 (392)
                      |+||.+++|+.+++|.|++||||||+|++++.+  |+||||+.....+...+.+..+.|||+|.+.....    .+.. +
T Consensus       223 a~DG~~~~P~~~~~l~i~~GqRydVlv~a~~~~--g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~----~p~~-~  295 (539)
T TIGR03389       223 EVDATYTKPFKTKTIVIGPGQTTNVLLTADQSP--GRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSA----KPIL-P  295 (539)
T ss_pred             EeCCcccCceEeCeEEecCCCEEEEEEECCCCC--ceEEEEEeccccCccCCCCcceEEEEEECCCCCCC----CCCC-C
Confidence            999999999999999999999999999999877  99999998764443223456789999998764321    1111 1


Q ss_pred             CCCCCCCccccccccccccccccCCCCCCCCCCcceEEEEEeccCcccCCCCCcccCCCCCeeeeeecceeccCCChhhh
Q 038598          161 SLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALL  240 (392)
Q Consensus       161 ~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNg~s~~~p~~~~l  240 (392)
                      ..+...+......+...++++....+|..+|..+++++++.+......... ..+...++..+.|++||++|..|++|+|
T Consensus       296 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~w~in~~s~~~p~~p~l  374 (539)
T TIGR03389       296 TLPAYNDTAAATNFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPN-NTCQGPNGTRFAASMNNISFVMPTTALL  374 (539)
T ss_pred             CCCCCCchhhhhHHHhhcccccccCCCCCCCCCCCeEEEEEeecccccCcc-cccccCCCcEEEEEECCcccCCCCcchh
Confidence            122222221111111233444322334344456677777666543321100 0111224566889999999998988988


Q ss_pred             HhhhhccCCCcccCCCCCCCCcCCCCCCC----------CCCCeeecCCcEEEEc-ccC---CCCCCceeecCCceEEEE
Q 038598          241 QSYFFAKSKGVYTADFPQFPLHPFNYTGT----------PPNNTFVSNGTKALDT-SIL---GAESHPLHLHGYNVYVVG  306 (392)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~----------~~~~~~~~~g~~v~~~-~~~---~~~~HP~HlHG~~F~Vl~  306 (392)
                      ++.+.+++ |.+..+++..+|..|++.+.          +.+.+.++.|++|+.+ .+.   ....||||||||+||||+
T Consensus       375 ~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg  453 (539)
T TIGR03389       375 QAHYFGIS-GVFTTDFPANPPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVG  453 (539)
T ss_pred             hhhhcccC-CccccCCccCCCccccCCCCCcccccccccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEE
Confidence            87665543 55555566666666654432          1233567778877332 222   234899999999999999


Q ss_pred             eccCCCCCCCCCCCccCCCCCccceEEeCCCcEEEEEEEeCCceeeEEeecchhhhhcCcceEEEEecCCCCCCCCCCCC
Q 038598          307 QGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKLPPPP  386 (392)
Q Consensus       307 ~g~g~~~~~~~~~~~~~~~p~~rDtv~v~~~~~~~ir~~~dnpG~w~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~~p  386 (392)
                      +|.|.|+.......+|+.||++||||.|++++|++|||++||||.|+|||||+||+..||+++|.+.++++..++++++|
T Consensus       454 ~g~g~~~~~~~~~~~nl~nP~rRDTv~vp~~g~vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~~~p  533 (539)
T TIGR03389       454 TGFGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPP  533 (539)
T ss_pred             eccCCCCcccCccccccCCCCeeeeEEcCCCceEEEEEecCCCeEEEEEecccchhhhcceEEEEEccCCCCccccCCCC
Confidence            99999987655557999999999999999999999999999999999999999999999999999988877888999999


Q ss_pred             CCCCCC
Q 038598          387 SDLPKC  392 (392)
Q Consensus       387 ~~~~~c  392 (392)
                      ..+|.|
T Consensus       534 ~~~~~c  539 (539)
T TIGR03389       534 SDLPSC  539 (539)
T ss_pred             ccCCCC
Confidence            999999

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>PF14344 DUF4397: Domain of unknown function (DUF4397) Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
1aoz_A552 Refined Crystal Structure Of Ascorbate Oxidase At 1 2e-30
1v10_A521 Structure Of Rigidoporus Lignosus Laccase From Hemi 5e-23
2qt6_A498 Crystal Structure Determination Of A Blue Laccase F 1e-20
2xyb_A497 Crystal Structure Of A Fully Functional Laccase Fro 2e-19
4a2f_A497 Coriolopsis Gallica Laccase Collected At 12.65 Kev 2e-19
4a2d_A496 Coriolopsis Gallica Laccase T2 Copper Depleted At P 2e-19
1gyc_A499 Crystal Structure Determination At Room Temperature 3e-19
3t6v_A495 Crystal Structure Of Laccase From Steccherinum Ochr 9e-19
1a65_A504 Type-2 Cu-depleted Laccase From Coprinus Cinereus L 1e-18
1hfu_A503 Type-2 Cu-Depleted Laccase From Coprinus Cinereus A 1e-18
2hrg_A496 Crystal Structure Of Blue Laccase From Trametes Tro 2e-18
3pxl_A499 Type-2 Cu-Depleted Fungus Laccase From Trametes Hir 4e-17
3fpx_A499 Native Fungus Laccase From Trametes Hirsuta Length 9e-17
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 2e-16
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 4e-16
2h5u_A499 Crystal Structure Of Laccase From Cerrena Maxima At 1e-15
3div_A499 Crystal Structure Of Laccase From Cerrena Maxima At 2e-15
1zpu_A534 Crystal Structure Of Fet3p, A Multicopper Oxidase T 6e-15
3kw7_A502 Crystal Structure Of Lacb From Trametes Sp. Ah28-2 1e-14
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 2e-14
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 1e-12
2q9o_A559 Near-Atomic Resolution Structure Of A Melanocarpus 1e-12
1gw0_A559 Crystal Structure Of Laccase From Melanocarpus Albo 1e-12
3dkh_A559 L559a Mutant Of Melanocarpus Albomyces Laccase Leng 1e-12
2hzh_A499 Crystal Structure Of Laccase From Coriolus Zonatus 2e-12
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 174/387 (44%), Gaps = 57/387 (14%)
Query: 22  NVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVE 81
           +++  Y  N  P       +   Y   V P KTY +R+ +T     L F+I NH L VVE
Sbjct: 181 SIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE 240
Query: 82  ADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGT---FDNSTVA 138
           AD  YV+PF T+ + I  G++ +VL+ T+ NP        +  Y+  +GT     N+   
Sbjct: 241 ADGNYVQPFYTSDIDIYSGESYSVLITTDQNP--------SENYWVSVGTRARHPNTPPG 292
Query: 139 AILEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRF 198
             L    P+  +     T   P  PA +D +   NF+ +  +   +  P   P   ++R 
Sbjct: 293 LTLLNYLPNSVSKLP--TSPPPQTPAWDDFDRSKNFTYRITAAMGSPKP---PVKFNRRI 347
Query: 199 FFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQ 258
           F                Q         A+N+VS ALP T     Y  A    +  A F Q
Sbjct: 348 FLL------------NTQNVINGYVKWAINDVSLALPPTP----YLGAMKYNLLHA-FDQ 390
Query: 259 FP---LHPFNY-TGTPPNN--TFVSNGT------KALDTSILGA--------ESHPLHLH 298
            P   + P +Y   TPP N  T + NG       + +D  +  A        E+HP HLH
Sbjct: 391 NPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLH 450
Query: 299 GYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHF 358
           G++ +V+G G G F  + +    NL +P  RNTV +   GW AIRF+ADNPGVW  HCH 
Sbjct: 451 GHDFWVLGYGDGKFSAEEE-SSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHI 509
Query: 359 DVHLSWGLRMAW---IVLDGELPNQKL 382
           + HL  G+ + +   +   G +P + L
Sbjct: 510 EPHLHMGMGVVFAEGVEKVGRIPTKAL 536
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 Back     alignment and structure
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 Back     alignment and structure
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 Back     alignment and structure
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 Back     alignment and structure
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 Back     alignment and structure
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 Back     alignment and structure
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 Back     alignment and structure
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 Back     alignment and structure
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 Back     alignment and structure
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 Back     alignment and structure
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 Back     alignment and structure
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 Back     alignment and structure
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 Back     alignment and structure
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 Back     alignment and structure
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 1e-138
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 1e-127
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 1e-127
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 1e-119
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 1e-118
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 1e-115
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 1e-112
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 1e-107
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 1e-38
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 2e-07
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 1e-33
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 2e-10
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 2e-25
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 6e-17
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 5e-12
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 3e-13
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 4e-13
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 2e-12
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 2e-07
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 2e-11
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 5e-08
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 3e-11
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 5e-08
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 1e-10
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 2e-06
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 1e-05
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 7e-04
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 7e-09
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 9e-09
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 9e-07
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 1e-08
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 3e-08
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 6e-08
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 2e-07
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 5e-07
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 5e-07
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 2e-04
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 6e-07
2zoo_A442 Probable nitrite reductase; electron transfer, ele 4e-06
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 9e-07
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 6e-04
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 Back     alignment and structure
 Score =  404 bits (1040), Expect = e-138
 Identities = 108/425 (25%), Positives = 169/425 (39%), Gaps = 62/425 (14%)

Query: 1   EWFNADPEAIINQSLQTG------------NG-----PNVSEAYTFNGLPGPTYNCSAKD 43
           +W++                          NG      +++  Y  N  P       +  
Sbjct: 143 DWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCA 202

Query: 44  TYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTT 103
            Y   V P KTY +R+ +T     L F+I NH L VVEAD  YV+PF T+ + I  G++ 
Sbjct: 203 PYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESY 262

Query: 104 NVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEAPSQDNSFRNRTLFKPSLP 163
           +VL+ T+ N P+ ++++            +      +L Y   S        T   P  P
Sbjct: 263 SVLITTDQN-PSENYWVSVGTRARH---PNTPPGLTLLNYLPNSVSKL---PTSPPPQTP 315

Query: 164 AINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKF 223
           A +D +   NF+ +  +   +  P   P   ++R F                Q       
Sbjct: 316 AWDDFDRSKNFTYRITAAMGSPKP---PVKFNRRIFLL------------NTQNVINGYV 360

Query: 224 AAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKAL 283
             A+N+VS ALP T  L +  +      +  + P           TPP N     G    
Sbjct: 361 KWAINDVSLALPPTPYLGAMKY-NLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVY 419

Query: 284 -------------DTSILG---AESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPV 327
                        + +++    +E+HP HLHG++ +V+G G G F    +    NL +P 
Sbjct: 420 QFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA-EEESSLNLKNPP 478

Query: 328 ERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKLPPPPS 387
            RNTV +   GW AIRF+ADNPGVW  HCH + HL  G+ + +         +K+   P+
Sbjct: 479 LRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAE-----GVEKVGRIPT 533

Query: 388 DLPKC 392
               C
Sbjct: 534 KALAC 538
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query392
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 100.0
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 100.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 100.0
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 100.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 100.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 100.0
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 100.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 100.0
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 100.0
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 100.0
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 100.0
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 100.0
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 100.0
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 100.0
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 100.0
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 100.0
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 99.95
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.94
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.93
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.92
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.92
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.9
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 99.89
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.88
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 99.88
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.86
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 99.85
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 99.83
1sdd_B 647 Coagulation factor V; copper-binding protein, cofa 99.8
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.8
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.77
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.75
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.73
2r7e_B 770 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.71
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.67
2zoo_A442 Probable nitrite reductase; electron transfer, ele 99.64
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.63
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.63
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 99.61
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.56
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 99.49
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.45
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.41
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 99.3
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.29
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.05
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.03
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 98.97
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 98.94
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 98.92
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 98.83
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 98.74
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 98.72
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 98.72
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.66
2xu9_A 439 Laccase; oxidoreductase, multicopper oxidases; 1.5 98.63
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.46
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.39
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.37
3pxl_A 499 Laccase; 4-copper protein, metal-binding, oxidored 98.36
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.35
1aoz_A 552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 98.32
2uxt_A 451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 98.3
3t6v_A 495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 98.29
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.26
1v10_A 521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 98.23
1hfu_A 503 Laccase 1; oxidoreductase, blue multi-copper oxida 98.19
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.15
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.01
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 97.98
1zpu_A 534 Iron transport multicopper oxidase FET3; ferroxida 97.92
3sqr_A 580 Laccase; multicopper oxidase, glycosylation, oxido 97.91
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 97.89
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 97.82
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 97.73
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 97.72
2q9o_A 559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 97.72
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 97.56
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 97.35
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 97.34
3aw5_A 448 Multicopper oxidase; beta barrel, oxidoreductase; 97.32
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 97.06
2cal_A154 Rusticyanin; iron respiratory electron transport c 96.87
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 96.79
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 96.79
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 96.64
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 96.56
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 96.5
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 96.09
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 95.93
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 95.86
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 95.83
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 95.74
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 95.7
3c75_A132 Amicyanin; copper proteins, electron transfer comp 95.54
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 94.88
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 94.71
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 94.57
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 94.34
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 94.11
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 94.02
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 93.79
2cal_A154 Rusticyanin; iron respiratory electron transport c 93.69
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 93.68
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 93.21
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 92.88
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 92.44
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 92.43
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 91.5
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 91.49
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 90.44
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 89.85
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 88.98
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 88.85
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 88.28
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 88.16
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 87.92
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 87.62
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 86.52
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 86.45
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 85.77
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 84.62
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 82.96
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
Probab=100.00  E-value=2.5e-63  Score=507.81  Aligned_cols=360  Identities=28%  Similarity=0.427  Sum_probs=263.1

Q ss_pred             CCCCCCHHHHHHHHhcCC-CCCCCCceEEEcCCcCCCCC-------------CCCC-----CccEEEEeCCCEEEEEEEe
Q 038598            1 EWFNADPEAIINQSLQTG-NGPNVSEAYTFNGLPGPTYN-------------CSAK-----DTYKLKVKPGKTYMLRLIN   61 (392)
Q Consensus         1 Dwyh~~~~~~~~~~~~~~-~~~~~~d~~liNG~~~~~~~-------------~~~~-----~~~~~~v~~G~~yRlRlIN   61 (392)
                      ||||++..+++....... ...+.++++||||+..  +.             |+..     ..+.++|++|++|||||||
T Consensus       143 Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliN  220 (552)
T 1aoz_A          143 DWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIAS  220 (552)
T ss_dssp             EECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEE
T ss_pred             cccCCCHHHHHhhhhcccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEc
Confidence            899999988875533221 2335689999999974  33             3322     2348999999999999999


Q ss_pred             cCCCCeEEEEEcCceEEEEEeCCccccceEEeEEEecCCCeEEEEEEcC-CCCCCCceEEEEeccCCCCCcCCCcceEEE
Q 038598           62 TALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTN-PNPPNASFFMLARPYFTGMGTFDNSTVAAI  140 (392)
Q Consensus        62 a~~~~~~~l~id~h~m~VIa~DG~~v~P~~v~~l~l~pGeRydVlv~~~-~~~~~g~y~i~~~~~~~~~~~~~~~~~~ai  140 (392)
                      +|+.+.+.|+|+||+|+|||+||++++|+.+++|.|++||||||+|+++ +.+  |+|||++.... +.  .......|+
T Consensus       221 a~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~--g~y~i~~~~~~-~~--~~~~~~~ai  295 (552)
T 1aoz_A          221 TTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPS--ENYWVSVGTRA-RH--PNTPPGLTL  295 (552)
T ss_dssp             CCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTT--CCEEEEEEEES-SC--CCSCCEEEE
T ss_pred             ccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCC--CCEEEEEEccc-CC--CCCccEEEE
Confidence            9999999999999999999999999999999999999999999999994 444  89999998754 21  235678999


Q ss_pred             EEecCCCCCCCCCCCCccCCCCCCCCCccccccccccccccccCCCCCCCCCCcceEEEEEeccCcccCCCCCcccCCCC
Q 038598          141 LEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNG  220 (392)
Q Consensus       141 L~y~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  220 (392)
                      |+|.+......+  .... |..+.+++.....  ...++.+.... +...+...++++.+.+.....           + 
T Consensus       296 l~y~~~~~~~~p--~~~~-p~~p~~~~~~~~~--~~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~-----------~-  357 (552)
T 1aoz_A          296 LNYLPNSVSKLP--TSPP-PQTPAWDDFDRSK--NFTYRITAAMG-SPKPPVKFNRRIFLLNTQNVI-----------N-  357 (552)
T ss_dssp             EEETTSCTTSCC--SSCC-CCCCCTTCHHHHH--HHHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE-----------T-
T ss_pred             EEECCCCCCCCC--CCCC-CCCCccccccccc--cccccccccCC-CCCCCCCCcEEEEEEEeeccC-----------C-
Confidence            999876421110  1111 3333333322111  11233332211 333456778888887754321           2 


Q ss_pred             CeeeeeecceeccCCChhhhHhhhhccCCCcccCCCCCCCCc-CCCCCCC--------CCCCeeecCCcEEEE-cccCC-
Q 038598          221 TKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLH-PFNYTGT--------PPNNTFVSNGTKALD-TSILG-  289 (392)
Q Consensus       221 ~~~~~~iNg~s~~~p~~~~l~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~--------~~~~~~~~~g~~v~~-~~~~~-  289 (392)
                      +.+.|+|||.+|..|..|+|.+.+.+++ |.|..+++..++. .|++...        +...+.++.|++|+. +.+.+ 
T Consensus       358 ~~~~w~iNg~s~~~p~~P~L~~~~~~~~-g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~  436 (552)
T 1aoz_A          358 GYVKWAINDVSLALPPTPYLGAMKYNLL-HAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANM  436 (552)
T ss_dssp             TEEEEEETTEEECCCSSCHHHHHHTTCT-TSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCC
T ss_pred             CeEEEEECCCccCCCCCCHHHHHhhcCc-cccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcc
Confidence            2467999999999998898888776654 6666555433221 2332210        123456788987732 22222 


Q ss_pred             -----CCCCceeecCCceEEEEeccCCCCCCCCCCCccCCCCCccceEEeCCCcEEEEEEEeCCceeeEEeecchhhhhc
Q 038598          290 -----AESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSW  364 (392)
Q Consensus       290 -----~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDtv~v~~~~~~~ir~~~dnpG~w~~HCHi~~H~~~  364 (392)
                           ...||||||||+||||++|.|.|++ .+...+|+.+|.|||||.|++++|++|||++||||.|+|||||+||++.
T Consensus       437 ~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~  515 (552)
T 1aoz_A          437 MKENLSETHPWHLHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHM  515 (552)
T ss_dssp             SSTTCCCCEEEEETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHT
T ss_pred             cccccCCCCCEEEcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhC
Confidence                 4579999999999999999999987 4456789999999999999999999999999999999999999999999


Q ss_pred             CcceEEEEecCCCCCCCCCCCCCCCCCC
Q 038598          365 GLRMAWIVLDGELPNQKLPPPPSDLPKC  392 (392)
Q Consensus       365 Gm~~~~~v~~~~~~~~~~~~~p~~~~~c  392 (392)
                      |||++|.+.+     ++++.+|.+++.|
T Consensus       516 GM~~~~~~~~-----~~~~~~P~~~~~C  538 (552)
T 1aoz_A          516 GMGVVFAEGV-----EKVGRIPTKALAC  538 (552)
T ss_dssp             TCEEEEEECG-----GGCCCCCHHHHSS
T ss_pred             CCeEEEEeCc-----hhhccCCcchhhh
Confidence            9999998753     2566789999999
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 392
d1aoza3214 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C 2e-35
d1v10a2168 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus 1e-32
d1aoza2209 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C 4e-31
d1hfua2172 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr 2e-27
d2q9oa2181 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce 2e-27
d2q9oa3216 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce 4e-27
d1gyca2170 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, 7e-26
d1gyca3199 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, 4e-25
d1hfua3200 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr 4e-25
d1gska3154 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba 3e-23
d1v10a3190 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus 4e-22
d1kv7a3181 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc 3e-15
d1sddb2139 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B 5e-13
d1kv7a2165 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc 4e-12
d2j5wa5149 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa 7e-12
d1kcwa2146 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap 2e-10
d2j5wa2145 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap 4e-09
d1sdda2116 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos 2e-08
d2bw4a2173 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcali 9e-05
d1gyca1130 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la 1e-04
d1aoza1129 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc 1e-04
d1kbva2151 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisse 3e-04
d1v10a1136 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T 7e-04
d1e30a_153 b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan 8e-04
d2q9oa1162 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces 8e-04
d1kbva1151 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser 0.001
d1oe2a1159 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige 0.003
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 Back     information, alignment and structure

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

 Score =  127 bits (319), Expect = 2e-35
 Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 35/218 (16%)

Query: 191 PQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKG 250
           P   ++R F   +            Q         A+N+VS ALP T  L +  +     
Sbjct: 2   PVKFNRRIFLLNT------------QNVINGYVKWAINDVSLALPPTPYLGAMKY-NLLH 48

Query: 251 VYTADFPQFPLHPFNYTGTPPNNTFVSNGTKAL-------------DTSILG---AESHP 294
            +  + P           TPP N     G                 + +++    +E+HP
Sbjct: 49  AFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHP 108

Query: 295 LHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFM 354
            HLHG++ +V+G G G F    +    NL +P  RNTV +   GW AIRF+ADNPGVW  
Sbjct: 109 WHLHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAF 167

Query: 355 HCHFDVHLSWGLRMAWIVLDGELPNQKLPPPPSDLPKC 392
           HCH + HL  G+ + +         +K+   P+    C
Sbjct: 168 HCHIEPHLHMGMGVVFAEGV-----EKVGRIPTKALAC 200
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 173 Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query392
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 100.0
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.97
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.97
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.96
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.91
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.86
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 99.86
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.82
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.81
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.79
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.79
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.77
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.66
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.58
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.38
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.37
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.2
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.02
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.01
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 98.97
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.86
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 98.83
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 98.73
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.69
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 98.65
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.6
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.6
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 98.53
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 98.52
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.42
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.36
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.32
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.25
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.23
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 98.15
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.1
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.04
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.01
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 97.75
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 97.73
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 97.62
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 97.52
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 97.36
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 97.31
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.15
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 96.94
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 96.93
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 96.87
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 96.82
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 96.8
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 96.69
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 96.63
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 96.57
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 96.42
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 96.39
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 96.38
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 96.35
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 96.23
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 96.22
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 96.17
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 96.16
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 96.15
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 96.08
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 96.08
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 95.96
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 95.84
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 95.57
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 95.45
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 95.41
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 95.26
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 95.12
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 95.11
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 94.7
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 94.67
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 94.52
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 94.47
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 94.01
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 93.96
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 93.68
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 93.5
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 93.26
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 93.16
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 92.55
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 92.41
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 92.32
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 92.11
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 91.3
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 91.3
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 90.04
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 89.91
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 89.34
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 89.34
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 89.02
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 87.43
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 87.11
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 85.93
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 85.36
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 82.78
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 81.79
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=100.00  E-value=1.9e-36  Score=268.08  Aligned_cols=182  Identities=32%  Similarity=0.536  Sum_probs=135.4

Q ss_pred             CCCcceEEEEEeccCcccCCCCCcccCCCCCeeeeeecceeccCCChhhhHhhhhccCCCcccCCCCCCCCcCCCCCCC-
Q 038598          191 PQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHPFNYTGT-  269 (392)
Q Consensus       191 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNg~s~~~p~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-  269 (392)
                      |.+.++++.+...+..           .+| ..+|+|||+||..|++|+|.+.+.+.. +.++.+.+... ...++..+ 
T Consensus         2 P~~~~~ti~l~~~~~~-----------~ng-~~~~~iNniSf~~P~~P~l~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~   67 (214)
T d1aoza3           2 PVKFNRRIFLLNTQNV-----------ING-YVKWAINDVSLALPPTPYLGAMKYNLL-HAFDQNPPPEV-FPEDYDIDT   67 (214)
T ss_dssp             CSSCSEEEEEEEEEEE-----------ETT-EEEEEETTEEECCCSSCHHHHHHTTCT-TSSCCSCCCSC-CCTTCCTTS
T ss_pred             CCCCCeEEEEecCccc-----------cCC-eEEEEECCEeccCCCcchHHHHhhccc-cccccCCCccc-ccccccccC
Confidence            3466888888544322           133 568999999999999998888776543 44544432111 01111111 


Q ss_pred             ---------CCCCeeecCCcEEEE----ccc---CCCCCCceeecCCceEEEEeccCCCCCCCCCCCccCCCCCccceEE
Q 038598          270 ---------PPNNTFVSNGTKALD----TSI---LGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVG  333 (392)
Q Consensus       270 ---------~~~~~~~~~g~~v~~----~~~---~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDtv~  333 (392)
                               +.+.+.++.|++|+.    ...   .....||||||||+||||+++.|.|++.. ...+++.+|.|||||.
T Consensus        68 ~~~~~~~~~~t~v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~-~~~~n~~~p~~rDTv~  146 (214)
T d1aoza3          68 PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEE-ESSLNLKNPPLRNTVV  146 (214)
T ss_dssp             CCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGG-GGGSCCSSCCEESEEE
T ss_pred             CCCCcccccCceeEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccc-cccccccCCceecCcc
Confidence                     124567788988732    111   12457999999999999999999987653 4578999999999999


Q ss_pred             eCCCcEEEEEEEeCCceeeEEeecchhhhhcCcceEEEEecCCCCCCCCCCCCCCCCCC
Q 038598          334 VPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQKLPPPPSDLPKC  392 (392)
Q Consensus       334 v~~~~~~~ir~~~dnpG~w~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~~p~~~~~c  392 (392)
                      |++++|++|||++||||.|+||||+++|++.|||++|.|..     ++++.+|.+++.|
T Consensus       147 v~~g~~~~ir~~adnpG~w~~HCH~~~H~~~GM~~~~~v~~-----~~~~~~P~~~~~c  200 (214)
T d1aoza3         147 IFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV-----EKVGRIPTKALAC  200 (214)
T ss_dssp             ECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG-----GGCCCCCHHHHSS
T ss_pred             cCCCceEEEEEecCCCeeEEEEECcHHHHhCcCcEEEEEcc-----ccccCCCcccccc
Confidence            99999999999999999999999999999999999998753     3466788899998
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure