Citrus Sinensis ID: 038599
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 473 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SZW4 | 951 | Cadmium/zinc-transporting | yes | no | 0.847 | 0.421 | 0.578 | 1e-134 | |
| O64474 | 1172 | Putative cadmium/zinc-tra | no | no | 0.784 | 0.316 | 0.557 | 1e-127 | |
| P0CW78 | 760 | Cadmium/zinc-transporting | no | no | 0.830 | 0.517 | 0.521 | 1e-121 | |
| P0CW77 | 542 | Putative inactive cadmium | no | no | 0.467 | 0.407 | 0.484 | 4e-60 | |
| Q6GIX1 | 726 | Probable cadmium-transpor | yes | no | 0.805 | 0.524 | 0.334 | 2e-53 | |
| P37386 | 804 | Probable cadmium-transpor | yes | no | 0.805 | 0.473 | 0.334 | 8e-53 | |
| Q60048 | 711 | Probable cadmium-transpor | yes | no | 0.710 | 0.472 | 0.363 | 2e-52 | |
| P30336 | 723 | Probable cadmium-transpor | no | no | 0.706 | 0.461 | 0.355 | 7e-52 | |
| P20021 | 727 | Probable cadmium-transpor | yes | no | 0.809 | 0.526 | 0.318 | 4e-51 | |
| P58414 | 707 | Probable cadmium-transpor | yes | no | 0.799 | 0.534 | 0.309 | 7e-47 |
| >sp|Q9SZW4|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2 OS=Arabidopsis thaliana GN=HMA2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/413 (57%), Positives = 307/413 (74%), Gaps = 12/413 (2%)
Query: 69 VLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLG 128
V FCA +KAAT+GLL+KG DYLE LAK+K+VA DKTGT+TRGEF V DFQS+ +D+SL
Sbjct: 357 VATFCALTKAATSGLLIKGADYLETLAKIKIVAFDKTGTITRGEFIVMDFQSLSEDISLQ 416
Query: 129 TLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIG 188
+LLYWVSS ESKSSHPMAAA+VDYARS+++EP PE VED+QNFPGEGI+GKI G +YIG
Sbjct: 417 SLLYWVSSTESKSSHPMAAAVVDYARSVSVEPKPEAVEDYQNFPGEGIYGKIDGKEVYIG 476
Query: 189 NRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLG 248
N+RI R GC + GGKT GYVY+G T G F+LSD+CRSG +A+K+LKSLG
Sbjct: 477 NKRIASRAGCLSVPDIDVDTKGGKTIGYVYVGETLAGVFNLSDACRSGVAQAMKELKSLG 536
Query: 249 IKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKK-DGATAMVGDGIND 307
IK +L GD+HAAA++AQ+QL +A D+V AELLP+ K E+++ LK+ +G TAMVGDG+ND
Sbjct: 537 IKIAMLTGDNHAAAMHAQEQLGNAMDIVRAELLPEDKSEIIKQLKREEGPTAMVGDGLND 596
Query: 308 APALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVT 367
APALA DIGISMG+SGSALA E+G++ILMSNDIR+IP+AIKLA++A K+++NV +S+T
Sbjct: 597 APALATADIGISMGVSGSALATETGNIILMSNDIRRIPQAIKLAKRAKRKVVENVVISIT 656
Query: 368 VKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSKYGTFSLSC 427
+KGA+L LA AG+PL+W AVL DVGTCL+VILNSMLLL + + ++ + L
Sbjct: 657 MKGAILALAFAGHPLIWAAVLADVGTCLLVILNSMLLLSDKHKTGNKCYRESSSSSVLIA 716
Query: 428 KKDE-----DKEA-----LNVKNCRSRCC-EATSAKDMASTSLQGQTGPNPCC 469
+K E D EA ++ K+C+ CC T K M + CC
Sbjct: 717 EKLEGDAAGDMEAGLLPKISDKHCKPGCCGTKTQEKAMKPAKASSDHSHSGCC 769
|
Plays an important role in zinc transport and homeostasis. Could also be involved in cadmium detoxification. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 5 |
| >sp|O64474|HMA4_ARATH Putative cadmium/zinc-transporting ATPase HMA4 OS=Arabidopsis thaliana GN=HMA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/391 (55%), Positives = 291/391 (74%), Gaps = 20/391 (5%)
Query: 17 LLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFS 76
+++ + L + +H LA+ ++ G P LI S V FCA +
Sbjct: 335 VIMKVHNLKHWFH----LALVVLVSGCPCGLILS----------------TPVATFCALT 374
Query: 77 KAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSS 136
KAAT+GLL+K DYL+ L+K+K+VA DKTGT+TRGEF V DF+S+ D++L +LLYWVSS
Sbjct: 375 KAATSGLLIKSADYLDTLSKIKIVAFDKTGTITRGEFIVIDFKSLSRDINLRSLLYWVSS 434
Query: 137 IESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRT 196
+ESKSSHPMAA +VDYA+S+++EP PE VED+QNFPGEGI+GKI GN I+IGN++I R
Sbjct: 435 VESKSSHPMAATIVDYAKSVSVEPRPEEVEDYQNFPGEGIYGKIDGNDIFIGNKKIASRA 494
Query: 197 GCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG 256
GCS E GGKT GYVY+G G F+LSD+CRSG +A+ +LKSLGIK+ +L G
Sbjct: 495 GCSTVPEIEVDTKGGKTVGYVYVGERLAGFFNLSDACRSGVSQAMAELKSLGIKTAMLTG 554
Query: 257 DSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDI 316
D+ AAA++AQ+QL + D+V+ +LLP+ K +++ KK+G TAMVGDG+NDAPALA DI
Sbjct: 555 DNQAAAMHAQEQLGNVLDVVHGDLLPEDKSRIIQEFKKEGPTAMVGDGVNDAPALATADI 614
Query: 317 GISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLA 376
GISMGISGSALA ++G++ILMSNDIR+IP+A+KLAR+A K+++NV LS+ +K +L LA
Sbjct: 615 GISMGISGSALATQTGNIILMSNDIRRIPQAVKLARRARRKVVENVCLSIILKAGILALA 674
Query: 377 VAGYPLVWVAVLTDVGTCLVVILNSMLLLKN 407
AG+PL+W AVL DVGTCL+VI NSMLLL+
Sbjct: 675 FAGHPLIWAAVLVDVGTCLLVIFNSMLLLRE 705
|
Involved in cadmium/zinc transport. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 5 |
| >sp|P0CW78|HMA3B_ARATH Cadmium/zinc-transporting ATPase HMA3 OS=Arabidopsis thaliana GN=HMA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/422 (52%), Positives = 296/422 (70%), Gaps = 29/422 (6%)
Query: 6 KWPAPSVMASG-------LLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLT 58
++ P+V+ S +LL + L + +H LA+ ++ G P LI S
Sbjct: 313 RYYTPAVVVSAACFAVIPVLLKVQDLSHWFH----LALVVLVSGCPCGLILS-------- 360
Query: 59 FNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDF 118
V FCA +KAAT+G L+K GD LE LAK+K+VA DKTGT+T+ EF V+DF
Sbjct: 361 --------TPVATFCALTKAATSGFLIKTGDCLETLAKIKIVAFDKTGTITKAEFMVSDF 412
Query: 119 QSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFG 178
+S+ ++L LL WVSSIE KSSHPMAAAL+DYA S+++EP P+ VE+FQNFPGEG++G
Sbjct: 413 RSLSPSINLHKLLNWVSSIECKSSHPMAAALIDYAISVSVEPKPDIVENFQNFPGEGVYG 472
Query: 179 KIHGNVIYIGNRRIGPRTGCSKDSIA--EAKCTGGKTRGYVYLGATPVGTFSLSDSCRSG 236
+I G IYIGN+RI R GC D++ EA GKT GY+Y+GA G+F+L D CR G
Sbjct: 473 RIDGQDIYIGNKRIAQRAGCLTDNVPDIEATMKRGKTIGYIYMGAKLTGSFNLLDGCRYG 532
Query: 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG 296
+A+K+LKSLGI++ +L GD+ AA+ Q+QL++A D+V++ELLPQ K +++ K G
Sbjct: 533 VAQALKELKSLGIQTAMLTGDNQDAAMSTQEQLENALDIVHSELLPQDKARIIDDFKIQG 592
Query: 297 ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKAST 356
T MVGDG+NDAPALA DIGISMGISGSALA E+G +ILMSNDIRKIPK ++LA+++
Sbjct: 593 PTMMVGDGLNDAPALAKADIGISMGISGSALATETGDIILMSNDIRKIPKGMRLAKRSHK 652
Query: 357 KLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFW 416
K+I+NV LSV++KGA++VL GYPLVW AVL D GTCL+VILNSM+LL++ E +
Sbjct: 653 KVIENVVLSVSIKGAIMVLGFVGYPLVWAAVLADAGTCLLVILNSMILLRDEREAVSTCY 712
Query: 417 KS 418
+S
Sbjct: 713 RS 714
|
In an heterologous system, involved in cadmium and lead transport, but not in zinc transport. May have a detoxification function through a vacuolar sequestration. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 5 |
| >sp|P0CW77|HMA3A_ARATH Putative inactive cadmium/zinc-transporting ATPase HMA3 OS=Arabidopsis thaliana GN=HMA3 PE=5 SV=1 | Back alignment and function description |
|---|
Score = 232 bits (592), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 163/250 (65%), Gaps = 29/250 (11%)
Query: 6 KWPAPSVMASG-------LLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLT 58
++ P+V+ S +LL + L + +H LA+ ++ G P LI S
Sbjct: 313 RYYTPAVVVSAACFAVIPVLLKVQDLSHWFH----LALVVLVSGCPCGLILS-------- 360
Query: 59 FNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDF 118
V FCA +KAAT+G L+K GD LE LAK+K+VA DKTGT+T+ EF V+DF
Sbjct: 361 --------TPVATFCALTKAATSGFLIKTGDCLETLAKIKIVAFDKTGTITKAEFMVSDF 412
Query: 119 QSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFG 178
+S+ ++L LLYWVSSIE KSSHPMAAAL+DYARS+++EP P+ VE+FQNFPGEG++G
Sbjct: 413 RSLSPSINLHKLLYWVSSIECKSSHPMAAALIDYARSVSVEPKPDIVENFQNFPGEGVYG 472
Query: 179 KIHGNVIYIGNRRIGPRTGCSKDSIA--EAKCTGGKTRGYVYLGATPVGTFSLSDSCRSG 236
+I G IYIGN+RI R GC D++ EA GKT GY+Y+GA G+F+L D CR G
Sbjct: 473 RIDGQDIYIGNKRIAQRAGCLTDNVPDIEATMKRGKTIGYIYMGAKLTGSFNLLDGCRYG 532
Query: 237 ALEAIKDLKS 246
+A+K+LKS
Sbjct: 533 VAQALKELKS 542
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q6GIX1|CADA_STAAR Probable cadmium-transporting ATPase OS=Staphylococcus aureus (strain MRSA252) GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 222/413 (53%), Gaps = 32/413 (7%)
Query: 6 KWPAPSVMASGLLLALS---FLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNIN 62
K+ P +M L+A+ F G + +A ++ G P L+ S
Sbjct: 330 KYYTPIIMVIAALVAVVPPLFFGGSWDTWVYQGLAVLVVGCPCALVIS------------ 377
Query: 63 VLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC 122
+ I A AA G+L+KGG YLE L +K +A DKTGT+T+G VTDF+ +
Sbjct: 378 ----TPISIVSAIGNAAKKGVLIKGGVYLEELGAIKAIAFDKTGTLTKGVPVVTDFKVLN 433
Query: 123 DDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHG 182
D V L ++++E +S HP+A+A++ A I VEDF + G GI G I G
Sbjct: 434 DQVEEKELFSIITALEYRSQHPLASAIMKKAEQDNITYSDVRVEDFTSITGRGIQGNIDG 493
Query: 183 NVIYIGNRRIGPRTGCSKDSIA-EAKC----TGGKTRGYVYLGATPVGTFSLSDSCRSGA 237
YIG+ R+ S S+ E K GKT + T +G +++D R +
Sbjct: 494 TTYYIGSPRLFKELNVSDFSLEFENKVKVLQNQGKTAMIIGTDQTILGVIAVADEVRETS 553
Query: 238 LEAIKDLKSLGIK-SFILAGDSH--AAALYAQDQLDHAFDMVYAELLPQHKEELVELLKK 294
I+ L LGIK + +L GD+ A A+ A + + +EL+PQ K + ++ +K
Sbjct: 554 KNVIQKLHQLGIKQTIMLTGDNQGTAEAIGAHVGVSD----IQSELMPQDKLDYIKKMKA 609
Query: 295 D-GATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARK 353
+ G AM+GDG+NDAPALAA +GI+MG +G+ A+E+ + LM +D+ K+P A++L+RK
Sbjct: 610 EHGNVAMIGDGVNDAPALAASTVGIAMGGAGTDTAIETADIALMGDDLSKLPFAVRLSRK 669
Query: 354 ASTKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLK 406
+ N+T ++ +K L+L + G+ +W+A+L+D+G ++V LNS+ L++
Sbjct: 670 TLNIIKANITFAIGIKIIALLLVIPGWLTLWIAILSDMGATILVALNSLRLMR 722
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Staphylococcus aureus (strain MRSA252) (taxid: 282458) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P37386|CADA2_STAAU Probable cadmium-transporting ATPase OS=Staphylococcus aureus GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 208 bits (529), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 221/413 (53%), Gaps = 32/413 (7%)
Query: 6 KWPAPSVMASGLLLALS---FLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNIN 62
K+ P +M L+A+ F G + +A ++ G P L+
Sbjct: 408 KYYTPIIMVIAALVAVVPPLFFGGSWDTWVYQGLAVLVVGCPCALV-------------- 453
Query: 63 VLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC 122
I + I A AA G+L+KGG YLE L +K +A DKTGT+T+G VTDF+ +
Sbjct: 454 --ITTPISIVSAIGNAAKKGVLIKGGVYLEELGAIKAIAFDKTGTLTKGVPVVTDFKVLN 511
Query: 123 DDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHG 182
D V L ++++E +S HP+A+A++ A I V+DF + G GI G I G
Sbjct: 512 DQVEEKELFSIITALEYRSQHPLASAIMKKAEQDNITYSDVRVKDFTSITGRGIQGNIDG 571
Query: 183 NVIYIGNRRIGPRTGCSKDSIA-EAKC----TGGKTRGYVYLGATPVGTFSLSDSCRSGA 237
YIG+ R+ S S+ E K GKT + T +G +++D R +
Sbjct: 572 TTYYIGSPRLFKELNVSDFSLEFENKVKVLQNQGKTAMIIGTDQTILGVIAVADEVRETS 631
Query: 238 LEAIKDLKSLGIK-SFILAGDSH--AAALYAQDQLDHAFDMVYAELLPQHKEELVELLKK 294
I L LGIK + +L GD+ A A+ A + + +ELLPQ K + ++ +K
Sbjct: 632 KNVILKLHQLGIKQTIMLTGDNQGTAEAIGAHVGVSD----IQSELLPQDKLDYIKKMKA 687
Query: 295 D-GATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARK 353
+ G AM+GDG+NDAPALAA +GI+MG +G+ A+E+ + LM +D+ K+P A++L+RK
Sbjct: 688 EHGNVAMIGDGVNDAPALAASTVGIAMGGAGTDTAIETADIALMGDDLSKLPFAVRLSRK 747
Query: 354 ASTKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLK 406
+ N+T ++ +K L+L + G+ +W+A+L+D+G ++V LNS+ L++
Sbjct: 748 TLNIIKANITFAIGIKIIALLLVIPGWLTLWIAILSDMGATILVALNSLRLMR 800
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Staphylococcus aureus (taxid: 1280) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q60048|CADA_LISMN Probable cadmium-transporting ATPase OS=Listeria monocytogenes GN=cadA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 198/347 (57%), Gaps = 11/347 (3%)
Query: 69 VLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLG 128
V I A AA G+LVKGG YLE + +K +A DKTGT+T+G VTD+ + + ++
Sbjct: 364 VAIVTAIGNAAKNGVLVKGGVYLEEIGGLKAIAFDKTGTLTKGVPVVTDYIELTEATNIQ 423
Query: 129 TLLYWV--SSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIY 186
++ +++E S HP+A+A++ Y + ++ NV DF + G+GI G + GN Y
Sbjct: 424 HNKNYIIMAALEQLSQHPLASAIIKYGETREMDLTSINVNDFTSITGKGIRGTVDGNTYY 483
Query: 187 IGNRRIGPRTGCSK--DSIAEAKCT---GGKTRGYVYLGATPVGTFSLSDSCRSGALEAI 241
+G+ + S+ DSI GKT + +++D RS + I
Sbjct: 484 VGSPVLFKELLASQFTDSIHRQVSDLQLKGKTAMLFGTNQKLISIVAVADEVRSSSQHVI 543
Query: 242 KDLKSLGI-KSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD-GATA 299
K L LGI K+ +L GD+ A A Q+ + EL+PQ K + ++ LK + G A
Sbjct: 544 KRLHELGIEKTIMLTGDNQATAQAIGQQV--GVSEIEGELMPQDKLDYIKQLKINFGKVA 601
Query: 300 MVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLI 359
MVGDGINDAPALAA +GI+MG +G+ A+E+ V LM +D++K+P +KL+RK +
Sbjct: 602 MVGDGINDAPALAAATVGIAMGGAGTDTAIETADVALMGDDLQKLPFTVKLSRKTLQIIK 661
Query: 360 QNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLK 406
QN+T S+ +K L+L + G+ +W+A++ D+G L+V LN + L+K
Sbjct: 662 QNITFSLVIKLIALLLVIPGWLTLWIAIMADMGATLLVTLNGLRLMK 708
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Listeria monocytogenes (taxid: 1639) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P30336|CADA_BACPE Probable cadmium-transporting ATPase OS=Bacillus pseudofirmus (strain OF4) GN=cadA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 205 bits (521), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 197/343 (57%), Gaps = 9/343 (2%)
Query: 71 IFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTL 130
I A AA G+LVKGG YLE + +K +A DKTGT+T+G VTD+ + ++ L
Sbjct: 380 IVSAIGNAAKKGVLVKGGVYLEEMGALKAIAFDKTGTLTKGVPAVTDYNVLNKQINEKEL 439
Query: 131 LYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNR 190
L ++++E +S HP+A+A++ A I VEDF + G+GI G ++G YIG+
Sbjct: 440 LSIITALEYRSQHPLASAIMKKAEEENITYSDVQVEDFSSITGKGIKGIVNGTTYYIGSP 499
Query: 191 RIGPRTGCSK-DSIAEAKCT----GGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLK 245
++ + D E T GKT + + +++D R + E ++ L
Sbjct: 500 KLFKELLTNDFDKDLEQNVTTLQNQGKTAMIIGTEKEILAVIAVADEVRESSKEILQKLH 559
Query: 246 SLGIK-SFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD-GATAMVGD 303
LGIK + +L GD+ A Q+ + AEL+PQ K + ++ L+ + G AMVGD
Sbjct: 560 QLGIKKTIMLTGDNKGTANAIGGQV--GVSDIEAELMPQDKLDFIKQLRSEYGNVAMVGD 617
Query: 304 GINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVT 363
G+NDAPALAA +GI+MG +G+ A+E+ V LM +D+RK+P +KL+RK + N+T
Sbjct: 618 GVNDAPALAASTVGIAMGGAGTDTALETADVALMGDDLRKLPFTVKLSRKTLNIIKANIT 677
Query: 364 LSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLK 406
++ +K L+L + G+ +W+A+L+D+G L+V LN + L++
Sbjct: 678 FAIAIKFIALLLVIPGWLTLWIAILSDMGATLLVALNGLRLMR 720
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Bacillus pseudofirmus (strain OF4) (taxid: 398511) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P20021|CADA1_STAAU Probable cadmium-transporting ATPase OS=Staphylococcus aureus GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (514), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 218/411 (53%), Gaps = 28/411 (6%)
Query: 6 KWPAPSVMASGLLLALS---FLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNIN 62
K+ P +M L+A+ F G + +A ++ G P L+ S
Sbjct: 331 KYYTPIIMVIAALVAVVPPLFFGGSWDTWVYQGLAVLVVGCPCALVIS------------ 378
Query: 63 VLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC 122
+ I A AA G+LVKGG YLE L +K VA DKTGT+T+G VTDF+ +
Sbjct: 379 ----TPISIVSAIGNAAKKGVLVKGGVYLEKLGAIKTVAFDKTGTLTKGVPVVTDFEVLN 434
Query: 123 DDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHG 182
D V L ++++E +S HP+A+A++ A I VE+F + G GI G ++G
Sbjct: 435 DQVEEKELFSIITALEYRSQHPLASAIMKKAEQDNIPYSNVQVEEFTSITGRGIKGIVNG 494
Query: 183 NVIYIGNRRIGPRTGCSKDSIA-----EAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGA 237
YIG+ ++ S S+ + GKT + T +G +++D R +
Sbjct: 495 TTYYIGSPKLFKELNVSDFSLGFENNVKILQNQGKTAMIIGTEKTILGVIAVADEVRETS 554
Query: 238 LEAIKDLKSLGIK-SFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD- 295
I+ L LGIK + +L GD+ A + + +EL+PQ K + ++ ++ +
Sbjct: 555 KNVIQKLHQLGIKQTIMLTGDNQGTANAIGTHV--GVSDIQSELMPQDKLDYIKKMQSEY 612
Query: 296 GATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKAS 355
AM+GDG+NDAPALAA +GI+MG +G+ A+E+ + LM +D+ K+P A++L+RK
Sbjct: 613 DNVAMIGDGVNDAPALAASTVGIAMGGAGTDTAIETADIALMGDDLSKLPFAVRLSRKTL 672
Query: 356 TKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLK 406
+ N+T ++ +K L+L + G+ +W+A+L+D+G ++V LNS+ L++
Sbjct: 673 NIIKANITFAIGIKIIALLLVIPGWLTLWIAILSDMGATILVALNSLRLMR 723
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Staphylococcus aureus (taxid: 1280) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
| >sp|P58414|CADA_LISMO Probable cadmium-transporting ATPase OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=cadA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (478), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 222/414 (53%), Gaps = 36/414 (8%)
Query: 6 KWPAPSVMASGLLLALS---FLG-----YIYHPLQSLAVAAVIFGLPAILIRSIASIKSL 57
K+ P++M LL+ + F G ++Y L L V G P L+
Sbjct: 314 KYYTPTIMLIALLVVVVPPLFFGGDWDTWVYQGLSLLVV-----GCPCSLV--------- 359
Query: 58 TFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTD 117
I V I A +A G+LVKGG YLE + ++ +A DKTGT+T+G+ VTD
Sbjct: 360 -------ISTPVSIVSAIGNSAKNGVLVKGGIYLEEIGGLQAIAFDKTGTLTKGKPVVTD 412
Query: 118 FQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIF 177
F + + L ++++E+ S HP+A+A++ A ++ +++F + G+G+
Sbjct: 413 FIPYSEHMDEQNSLSIITALETMSQHPLASAIISKAMIDNVDYKSIEIDNFSSITGKGVK 472
Query: 178 GKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCT---GGKTRGYVYLGATPVGTFSLSDSCR 234
G+++G YIG+ ++ + SI++ + GKT + + +++D R
Sbjct: 473 GEVNGITYYIGSSKLFESSLEKSQSISQTYQSLQKQGKTAMLFGTESNILAIIAVADEVR 532
Query: 235 SGALEAIKDLKSLGI-KSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLK 293
+ E I L LGI + +L GD++ A + ++ + AEL+P+ K ++ LK
Sbjct: 533 ESSKEVIAQLHKLGIAHTIMLTGDNNDTAQFIGKEI--GVSDIKAELMPEDKLTYIKELK 590
Query: 294 KD-GATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLAR 352
+ G AM+GDG+NDAPALAA +GI+MG +G+ A+E+ V LM +D++K+P + L+R
Sbjct: 591 QTYGKVAMIGDGVNDAPALAASTVGIAMGGAGTDTALETADVALMGDDLKKLPFIVNLSR 650
Query: 353 KASTKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLK 406
K + QN+T S+ +K L+L + G+ +W+A++ D+G L+V LN + L+K
Sbjct: 651 KTLKIIKQNITFSLGIKLLALLLVLPGWLTLWIAIVADMGATLLVTLNGLRLMK 704
|
This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism. Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) (taxid: 169963) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 473 | ||||||
| 255582930 | 962 | heavy metal cation transport atpase, put | 0.919 | 0.452 | 0.537 | 1e-133 | |
| 297798966 | 944 | predicted protein [Arabidopsis lyrata su | 0.847 | 0.424 | 0.576 | 1e-133 | |
| 15234620 | 951 | Cd2+/Zn2+-exporting ATPase [Arabidopsis | 0.847 | 0.421 | 0.578 | 1e-132 | |
| 20384833 | 951 | putative heavy-metal transporter [Arabid | 0.847 | 0.421 | 0.576 | 1e-131 | |
| 184160101 | 1161 | Zn/Cd P(IB)-type ATPase [Arabidopsis hal | 0.864 | 0.352 | 0.538 | 1e-130 | |
| 184160086 | 1163 | Zn/Cd P(IB)-type ATPase [Arabidopsis hal | 0.864 | 0.351 | 0.536 | 1e-130 | |
| 63056225 | 1161 | P1B-type ATPase 4 [Arabidopsis halleri s | 0.896 | 0.365 | 0.526 | 1e-130 | |
| 78182999 | 1161 | P1B-type ATPase 4 [Arabidopsis halleri] | 0.864 | 0.352 | 0.536 | 1e-129 | |
| 184160085 | 1161 | Zn/Cd P(IB)-type ATPase [Arabidopsis hal | 0.864 | 0.352 | 0.533 | 1e-129 | |
| 356550732 | 1076 | PREDICTED: cadmium/zinc-transporting ATP | 0.746 | 0.328 | 0.626 | 1e-129 |
| >gi|255582930|ref|XP_002532236.1| heavy metal cation transport atpase, putative [Ricinus communis] gi|223528070|gb|EEF30145.1| heavy metal cation transport atpase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/461 (53%), Positives = 320/461 (69%), Gaps = 26/461 (5%)
Query: 34 LAVAAVIFGLPAILIRSIASI----------KSLTFNINVLILMA-----------VLIF 72
+A A ++ PA++I S++ + ++ F + +++L++ V F
Sbjct: 288 VAKMAKLYYTPAVIIISVSLVVVPLALRVHNRNRWFRLALVVLVSACPCALILSTPVATF 347
Query: 73 CAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLY 132
CA +KAAT+G+L+KGGD LE LAK+K++A DKTGT+T+GEF V DF S+C+D+SL TL+Y
Sbjct: 348 CALTKAATSGVLIKGGDSLETLAKIKVMAFDKTGTITKGEFVVVDFGSLCEDISLDTLVY 407
Query: 133 WVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRI 192
WVSSIESKSSHPMAAALVDYA+SL+IEP PENV +FQNFPGEGI GKI G IYIGN++I
Sbjct: 408 WVSSIESKSSHPMAAALVDYAKSLSIEPNPENVVEFQNFPGEGIHGKIDGKEIYIGNKKI 467
Query: 193 GPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSF 252
G R G E + GGKT GYVY G TP+G FSLSD+CR+G EA+ LKS+G+K+
Sbjct: 468 GLRAGYGTVPTLETEMKGGKTVGYVYSGGTPIGIFSLSDACRTGVAEAVTKLKSMGVKTA 527
Query: 253 ILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALA 312
+L GDS AAA++AQ+QL HA ++V AELLP+ K ++E KK+G TAM+GDG+NDAPALA
Sbjct: 528 MLTGDSQAAAMHAQEQLGHALEVVKAELLPEDKARIIEEFKKEGTTAMIGDGVNDAPALA 587
Query: 313 AVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAV 372
DIGISMGISGSALA E+G VILMSNDIRKIP I LARKA K+I+NV LS++ K A+
Sbjct: 588 TADIGISMGISGSALATETGDVILMSNDIRKIPDVISLARKAHRKVIENVILSMSTKSAI 647
Query: 373 LVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSKYGTFSLSCKKDED 432
L LA AG+PLVW AVL DVGTCL+VI NSMLLL+ + G KS T + S K+D +
Sbjct: 648 LALAFAGHPLVWAAVLADVGTCLLVIFNSMLLLRGTHKHGGKCCKSSSATANTS-KRDNN 706
Query: 433 KEALNVKNCRSR----CCEATSAKDMASTSLQGQTGPNPCC 469
+ C R C + ++ AS + P C
Sbjct: 707 SSEHHHHCCSDRKVETSCNSHESRSCASRCQASDSSVKPSC 747
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297798966|ref|XP_002867367.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297313203|gb|EFH43626.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/411 (57%), Positives = 308/411 (74%), Gaps = 10/411 (2%)
Query: 69 VLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLG 128
V FCA +KAAT+GLL+KG DYLE LAK+K+VA DKTGT+TRGEF V DFQS+ +D+SL
Sbjct: 357 VATFCALTKAATSGLLIKGADYLETLAKIKVVAFDKTGTITRGEFIVMDFQSLSEDISLH 416
Query: 129 TLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIG 188
+LLYWVSS ESKSSHPMAAALVDYA+S+++EP PE VED+QNFPGEGI+GKI G +YIG
Sbjct: 417 SLLYWVSSAESKSSHPMAAALVDYAKSVSVEPKPEAVEDYQNFPGEGIYGKIDGKEVYIG 476
Query: 189 NRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLG 248
N+RI R+GCS + GGKT GYVY+G T G F+LSD+CRSG +A+K+LK+LG
Sbjct: 477 NKRIASRSGCSSVPDVDVDTKGGKTIGYVYVGKTLSGVFNLSDACRSGVAQAMKELKALG 536
Query: 249 IKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELV-ELLKKDGATAMVGDGIND 307
IK+ +L GD+ AAA++AQ+QL +A D+V AELLP+ K E++ E ++++G+TAMVGDG+ND
Sbjct: 537 IKTAMLTGDNQAAAMHAQEQLGNAMDIVRAELLPEGKSEIIKEFMREEGSTAMVGDGLND 596
Query: 308 APALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVT 367
APALA DIGISMG+SGSA+A E+G++ILMSNDIR+IP+AIKLAR+A K+++NV S+T
Sbjct: 597 APALATADIGISMGVSGSAIATETGNIILMSNDIRRIPQAIKLARRAKRKVVENVVTSIT 656
Query: 368 VKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSKYGTF---S 424
+KGA+L LA AG+PL+W AVL DVGTCL+VILNSMLLL +N + ++ +
Sbjct: 657 MKGAILALAFAGHPLIWAAVLADVGTCLLVILNSMLLLSDNHKTGNKCYRESSSSSIVEK 716
Query: 425 LSCKKDEDKEA-----LNVKNCRSRCC-EATSAKDMASTSLQGQTGPNPCC 469
L D EA ++ K+C+S CC T K M + CC
Sbjct: 717 LEGDAAGDMEAGLLPKISDKHCKSGCCGTKTQVKVMQPAKSSSDHSHSGCC 767
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15234620|ref|NP_194740.1| Cd2+/Zn2+-exporting ATPase [Arabidopsis thaliana] gi|12229675|sp|Q9SZW4.1|HMA2_ARATH RecName: Full=Cadmium/zinc-transporting ATPase HMA2; AltName: Full=Cadmium/zinc-transporting ATPase 3; AltName: Full=Protein HEAVY METAL ATPASE 2 gi|4938487|emb|CAB43846.1| cadmium-transporting ATPase-like protein [Arabidopsis thaliana] gi|7269911|emb|CAB81004.1| cadmium-transporting ATPase-like protein [Arabidopsis thaliana] gi|332660322|gb|AEE85722.1| Cd2+/Zn2+-exporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/413 (57%), Positives = 307/413 (74%), Gaps = 12/413 (2%)
Query: 69 VLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLG 128
V FCA +KAAT+GLL+KG DYLE LAK+K+VA DKTGT+TRGEF V DFQS+ +D+SL
Sbjct: 357 VATFCALTKAATSGLLIKGADYLETLAKIKIVAFDKTGTITRGEFIVMDFQSLSEDISLQ 416
Query: 129 TLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIG 188
+LLYWVSS ESKSSHPMAAA+VDYARS+++EP PE VED+QNFPGEGI+GKI G +YIG
Sbjct: 417 SLLYWVSSTESKSSHPMAAAVVDYARSVSVEPKPEAVEDYQNFPGEGIYGKIDGKEVYIG 476
Query: 189 NRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLG 248
N+RI R GC + GGKT GYVY+G T G F+LSD+CRSG +A+K+LKSLG
Sbjct: 477 NKRIASRAGCLSVPDIDVDTKGGKTIGYVYVGETLAGVFNLSDACRSGVAQAMKELKSLG 536
Query: 249 IKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKK-DGATAMVGDGIND 307
IK +L GD+HAAA++AQ+QL +A D+V AELLP+ K E+++ LK+ +G TAMVGDG+ND
Sbjct: 537 IKIAMLTGDNHAAAMHAQEQLGNAMDIVRAELLPEDKSEIIKQLKREEGPTAMVGDGLND 596
Query: 308 APALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVT 367
APALA DIGISMG+SGSALA E+G++ILMSNDIR+IP+AIKLA++A K+++NV +S+T
Sbjct: 597 APALATADIGISMGVSGSALATETGNIILMSNDIRRIPQAIKLAKRAKRKVVENVVISIT 656
Query: 368 VKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSKYGTFSLSC 427
+KGA+L LA AG+PL+W AVL DVGTCL+VILNSMLLL + + ++ + L
Sbjct: 657 MKGAILALAFAGHPLIWAAVLADVGTCLLVILNSMLLLSDKHKTGNKCYRESSSSSVLIA 716
Query: 428 KKDE-----DKEA-----LNVKNCRSRCC-EATSAKDMASTSLQGQTGPNPCC 469
+K E D EA ++ K+C+ CC T K M + CC
Sbjct: 717 EKLEGDAAGDMEAGLLPKISDKHCKPGCCGTKTQEKAMKPAKASSDHSHSGCC 769
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|20384833|gb|AAL14248.1| putative heavy-metal transporter [Arabidopsis thaliana] gi|38050296|gb|AAR10767.1| potential Zn/Cd heavy metal transporter [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/413 (57%), Positives = 306/413 (74%), Gaps = 12/413 (2%)
Query: 69 VLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLG 128
V FCA +KAAT+GLL+KG DYLE LAK+K+VA DKTGT+TRGEF V DFQS+ +D+SL
Sbjct: 357 VATFCALTKAATSGLLIKGADYLETLAKIKIVAFDKTGTITRGEFIVMDFQSLSEDISLQ 416
Query: 129 TLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIG 188
+LLYWVSS ESKSSHPMAAA+VDYARS+++EP PE VED+QN PGEGI+GKI G +YIG
Sbjct: 417 SLLYWVSSTESKSSHPMAAAVVDYARSVSVEPKPEAVEDYQNLPGEGIYGKIDGKEVYIG 476
Query: 189 NRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLG 248
N+RI R GC + GGKT GYVY+G T G F+LSD+CRSG +A+K+LKSLG
Sbjct: 477 NKRIASRAGCLSVPDIDVDTKGGKTIGYVYVGETLAGVFNLSDACRSGVAQAMKELKSLG 536
Query: 249 IKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKK-DGATAMVGDGIND 307
IK +L GD+HAAA++AQ+QL +A D+V AELLP+ K E+++ LK+ +G TAMVGDG+ND
Sbjct: 537 IKIAMLTGDNHAAAMHAQEQLGNAMDIVRAELLPEDKSEIIKQLKREEGPTAMVGDGLND 596
Query: 308 APALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVT 367
APALA DIGISMG+SGSALA E+G++ILMSNDIR+IP+AIKLA++A K+++NV +S+T
Sbjct: 597 APALATADIGISMGVSGSALATETGNIILMSNDIRRIPQAIKLAKRAKRKVVENVVISIT 656
Query: 368 VKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSKYGTFSLSC 427
+KGA+L LA AG+PL+W AVL DVGTCL+VILNSMLLL + + ++ + L
Sbjct: 657 MKGAILALAFAGHPLIWAAVLADVGTCLLVILNSMLLLSDKHKTGNKCYRESSSSSVLIA 716
Query: 428 KKDE-----DKEA-----LNVKNCRSRCC-EATSAKDMASTSLQGQTGPNPCC 469
+K E D EA ++ K+C+ CC T K M + CC
Sbjct: 717 EKLEGDAAGDMEAGLLPKISDKHCKPGCCGTKTQEKAMKPAKTSSDHSHSGCC 769
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|184160101|gb|ACC68167.1| Zn/Cd P(IB)-type ATPase [Arabidopsis halleri subsp. halleri] | Back alignment and taxonomy information |
|---|
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/442 (53%), Positives = 316/442 (71%), Gaps = 33/442 (7%)
Query: 17 LLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFS 76
+++ + L + +H LA+ ++ G P LI S V FCA +
Sbjct: 335 VIMKVHNLKHWFH----LALVVLVSGCPCGLILS----------------TPVATFCALT 374
Query: 77 KAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSS 136
KAAT+GLL+K DYL+ L+K+K+ A DKTGT+TRGEF V DF+S+ D+SL +LLYWVSS
Sbjct: 375 KAATSGLLIKSADYLDTLSKIKIAAFDKTGTITRGEFIVIDFKSLSRDISLRSLLYWVSS 434
Query: 137 IESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRT 196
+ESKSSHPMAA +VDYA+S+++EP PE VED+QNFPGEGI+GKI GN IYIGN+RI R
Sbjct: 435 VESKSSHPMAATIVDYAKSVSVEPRPEEVEDYQNFPGEGIYGKIDGNDIYIGNKRIASRA 494
Query: 197 GCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG 256
GCS E GGKT GYVY+G G F+LSD+CRSG +A+K+LKSLGIK+ +L G
Sbjct: 495 GCSTVPEIEVDTKGGKTVGYVYVGERLAGVFNLSDACRSGVSQAMKELKSLGIKTAMLTG 554
Query: 257 DSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDI 316
DS AAA++AQ+QL +A D+V+ ELLP+ K ++++ KK+G TAMVGDG+NDAPALA DI
Sbjct: 555 DSQAAAMHAQEQLGNALDVVHGELLPEDKSKIIQEFKKEGPTAMVGDGVNDAPALATADI 614
Query: 317 GISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLA 376
GISMGISGSALA ++GH+ILMSNDIR+IP+A+KLAR+A K+I+NV LS+ +K +L LA
Sbjct: 615 GISMGISGSALATQTGHIILMSNDIRRIPQAVKLARRARRKVIENVCLSIILKAGILALA 674
Query: 377 VAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSKYGTFSLSCKKDE--DKE 434
AG+PL+W AVL DVGTCL+VILNSMLLL+ ++ G + T L+ +K E D +
Sbjct: 675 FAGHPLIWAAVLVDVGTCLLVILNSMLLLREK-KKIGNKKCYRASTSMLNGRKLEGDDDD 733
Query: 435 ALNVK----------NCRSRCC 446
A++++ C+S CC
Sbjct: 734 AVDLEAGLLTKSGNGQCKSSCC 755
|
Source: Arabidopsis halleri subsp. halleri Species: Arabidopsis halleri Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|184160086|gb|ACC68153.1| Zn/Cd P(IB)-type ATPase [Arabidopsis halleri subsp. halleri] | Back alignment and taxonomy information |
|---|
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/442 (53%), Positives = 316/442 (71%), Gaps = 33/442 (7%)
Query: 17 LLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFS 76
+++ + L + +H LA+ ++ G P LI S V FCA +
Sbjct: 335 VIMKVHNLKHWFH----LALVVLVSGCPCGLILS----------------TPVATFCALT 374
Query: 77 KAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSS 136
KAAT+GLL+K DYL+ L+K+K+ A DKTGT+TRGEF V DF+S+ D++L +LLYWVSS
Sbjct: 375 KAATSGLLIKSADYLDTLSKIKIAAFDKTGTITRGEFIVIDFKSLSRDITLRSLLYWVSS 434
Query: 137 IESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRT 196
+ESKSSHPMAA +VDYA+S+++EP PE VED+QNFPGEGI+GKI GN IYIGN+RI R
Sbjct: 435 VESKSSHPMAATIVDYAKSVSVEPRPEEVEDYQNFPGEGIYGKIDGNDIYIGNKRIASRA 494
Query: 197 GCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG 256
GCS E GGKT GYVY+G G F+LSD+CRSG +A+K+LKSLGIK+ +L G
Sbjct: 495 GCSTVPETEIDTKGGKTVGYVYVGERLAGVFNLSDACRSGVSQAMKELKSLGIKTAMLTG 554
Query: 257 DSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDI 316
DS AAA++AQ+QL +A D+V+ ELLP+ K ++++ KK+G TAMVGDG+NDAPALA DI
Sbjct: 555 DSQAAAMHAQEQLGNALDVVHGELLPEDKSKIIQEFKKEGPTAMVGDGVNDAPALATADI 614
Query: 317 GISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLA 376
GISMGISGSALA ++GH+ILMSNDIR+IP+A+KLAR+A K+I+NV LS+ +K +L LA
Sbjct: 615 GISMGISGSALATQTGHIILMSNDIRRIPQAVKLARRARRKVIENVCLSIILKAGILALA 674
Query: 377 VAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSKYGTFSLSCKKDE--DKE 434
AG+PL+W AVL DVGTCL+VILNSMLLL+ ++ G + T L+ +K E D +
Sbjct: 675 FAGHPLIWAAVLVDVGTCLLVILNSMLLLREK-KKIGNKKCYRASTSMLNGRKLEGDDDD 733
Query: 435 ALNVK----------NCRSRCC 446
A++++ C+S CC
Sbjct: 734 AVDLEAGLLTKSGNGQCKSSCC 755
|
Source: Arabidopsis halleri subsp. halleri Species: Arabidopsis halleri Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|63056225|gb|AAY29151.1| P1B-type ATPase 4 [Arabidopsis halleri subsp. gemmifera] | Back alignment and taxonomy information |
|---|
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/456 (52%), Positives = 321/456 (70%), Gaps = 32/456 (7%)
Query: 6 KWPAPSVMASGLLLALSFLGYIYHPLQS---LAVAAVIFGLPAILIRSIASIKSLTFNIN 62
++ P+++ +A+ + H L+ LA+ ++ G P LI S
Sbjct: 317 QYYTPAIIVVSACVAIVPVIMKVHNLKHWSHLALVVLVSGCPCGLILS------------ 364
Query: 63 VLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC 122
V FCA +KAAT+GLL+K DYL+ L+K+K+ A DKTGT+TRGEF V DF+S+
Sbjct: 365 ----TPVATFCALTKAATSGLLIKSADYLDTLSKIKIAAFDKTGTITRGEFIVIDFKSLS 420
Query: 123 DDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHG 182
D+SL +LLYWVSS+ESKSSHPMAA +VDYA+S+++EP PE VED+QNFPGEGI+GKI G
Sbjct: 421 RDISLRSLLYWVSSVESKSSHPMAATIVDYAKSVSVEPRPEEVEDYQNFPGEGIYGKIDG 480
Query: 183 NVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIK 242
N IYIGN+RI R GCS E GGKT GYVY+G G F+LSD+CRSG +A+K
Sbjct: 481 NDIYIGNKRIASRAGCSTVPEIEVDTKGGKTVGYVYVGERLAGVFNLSDACRSGVSQAMK 540
Query: 243 DLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVG 302
+LKSLGIK+ +L GDS AAA++AQ+QL +A D+V+ ELLP+ K ++++ KK+G TAMVG
Sbjct: 541 ELKSLGIKTAMLTGDSQAAAMHAQEQLGNALDVVHGELLPEDKSKIIQEFKKEGLTAMVG 600
Query: 303 DGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNV 362
DG+NDAPALA DIGISMGISGSALA ++GH+ILMSNDIR+IP+A+KLAR+A K+I+NV
Sbjct: 601 DGVNDAPALATADIGISMGISGSALATQTGHIILMSNDIRRIPQAVKLARRARRKVIENV 660
Query: 363 TLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSKYGT 422
LS+ +K +L LA AG+PL+W AVL DVGTCL+VILNSMLLL+ ++ G + T
Sbjct: 661 CLSIILKAGILALAFAGHPLIWAAVLVDVGTCLLVILNSMLLLREK-KKIGNKKCYRAST 719
Query: 423 FSLSCKKDE--DKEALNVK----------NCRSRCC 446
L+ +K E D +A++++ C+S CC
Sbjct: 720 SMLNGRKLEGDDDDAVDLEAGLLTKSGNGQCKSSCC 755
|
Source: Arabidopsis halleri subsp. gemmifera Species: Arabidopsis halleri Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|78182999|gb|ABB29495.1| P1B-type ATPase 4 [Arabidopsis halleri] | Back alignment and taxonomy information |
|---|
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/442 (53%), Positives = 315/442 (71%), Gaps = 33/442 (7%)
Query: 17 LLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFS 76
+++ + L + +H LA+ ++ G P LI S V FCA +
Sbjct: 335 VIMKVHNLKHWFH----LALVVLVSGCPCGLILS----------------TPVATFCALT 374
Query: 77 KAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSS 136
KAAT+GLL+K DYL+ L+K+K+ A DKTGT+TRGEF V DF+S+ D+SL +LLYWVSS
Sbjct: 375 KAATSGLLIKSADYLDTLSKIKIAAFDKTGTITRGEFIVIDFKSLSRDISLRSLLYWVSS 434
Query: 137 IESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRT 196
+ESKSSHPMAA +VDYA+S+++EP PE VED+QNFPGEGI+GKI GN IYIGN+RI R
Sbjct: 435 VESKSSHPMAATIVDYAKSVSVEPRPEEVEDYQNFPGEGIYGKIDGNDIYIGNKRIASRA 494
Query: 197 GCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG 256
GCS E GGKT GYVY+G G F+LSD+CRSG +A+K+LKSLGIK+ +L G
Sbjct: 495 GCSTVPETEIDTKGGKTVGYVYVGERLAGVFNLSDACRSGVSQAMKELKSLGIKTAMLTG 554
Query: 257 DSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDI 316
DS AAA++AQ+QL + D+V+ ELLP+ K ++++ KK+G TAMVGDG+NDAPALA DI
Sbjct: 555 DSQAAAMHAQEQLGNVLDVVHGELLPEDKSKIIQEFKKEGPTAMVGDGVNDAPALATADI 614
Query: 317 GISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLA 376
GISMGISGSALA ++GH+ILMSNDIR+IP+A+KLAR+A K+I+NV LS+ +K +L LA
Sbjct: 615 GISMGISGSALATQTGHIILMSNDIRRIPQAVKLARRARRKVIENVCLSIILKAGILALA 674
Query: 377 VAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSKYGTFSLSCKKDE--DKE 434
AG+PL+W AVL DVGTCL+VILNSMLLL+ ++ G + T L+ +K E D +
Sbjct: 675 FAGHPLIWAAVLVDVGTCLLVILNSMLLLREK-KKIGNKKCYRASTSMLNGRKLEGDDDD 733
Query: 435 ALNVK----------NCRSRCC 446
A++++ C+S CC
Sbjct: 734 AVDLEAGLLTKSGNGQCKSSCC 755
|
Source: Arabidopsis halleri Species: Arabidopsis halleri Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|184160085|gb|ACC68152.1| Zn/Cd P(IB)-type ATPase [Arabidopsis halleri subsp. halleri] | Back alignment and taxonomy information |
|---|
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/442 (53%), Positives = 315/442 (71%), Gaps = 33/442 (7%)
Query: 17 LLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFS 76
+++ + L + +H LA+ ++ G P LI S V FCA +
Sbjct: 335 VIMKVHNLKHWFH----LALVVLVSGCPCGLILS----------------TPVATFCALT 374
Query: 77 KAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSS 136
KAAT+GLL+K DYL+ L+K+K+ A DKTGT+TRGEF V DF+S+ D+SL +LLYWVSS
Sbjct: 375 KAATSGLLIKSADYLDTLSKIKIAAFDKTGTITRGEFIVIDFKSLSRDISLRSLLYWVSS 434
Query: 137 IESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRT 196
+ESKSSHPMAA +VDYA+S+++EP PE VED+QNFPGEGI+GKI GN IYIGN+RI R
Sbjct: 435 VESKSSHPMAATIVDYAKSVSVEPRPEEVEDYQNFPGEGIYGKIDGNDIYIGNKRIASRA 494
Query: 197 GCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG 256
GCS E GGKT GYVY+G G F+LSD+CRSG +A+K+LKSLGIK+ +L G
Sbjct: 495 GCSTVPETEIDTKGGKTVGYVYVGERLAGVFNLSDACRSGVSQAMKELKSLGIKTAMLTG 554
Query: 257 DSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDI 316
DS AAA++AQ+QL + D+V+ ELLP+ K ++++ KK+G TAMVGDG+NDAPALA DI
Sbjct: 555 DSQAAAMHAQEQLGNVLDVVHGELLPEDKSKIIQEFKKEGPTAMVGDGVNDAPALATADI 614
Query: 317 GISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLA 376
GISMGISGSALA ++GH+ILMSNDIR+IP+A+KLAR+A K+I+NV+LS+ +K +L LA
Sbjct: 615 GISMGISGSALATQTGHIILMSNDIRRIPQAVKLARRARRKVIENVSLSIILKAGILALA 674
Query: 377 VAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSKYGTFSLSCKKDE--DKE 434
AG+PL+W AVL DVGTCL+VI NSMLLL+ ++ G + T L+ +K E D +
Sbjct: 675 FAGHPLIWAAVLVDVGTCLLVIFNSMLLLREK-KKIGNKKCYRASTSMLNGRKLEGDDDD 733
Query: 435 ALNVK----------NCRSRCC 446
A++++ C+S CC
Sbjct: 734 AVDLEAGLLTKSGNGQCKSSCC 755
|
Source: Arabidopsis halleri subsp. halleri Species: Arabidopsis halleri Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550732|ref|XP_003543738.1| PREDICTED: cadmium/zinc-transporting ATPase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/356 (62%), Positives = 282/356 (79%)
Query: 63 VLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC 122
+++ V FCA+SKAAT+GLL+KGGD+LE LAK+K++A DKTGT+T+GEF VT FQS+
Sbjct: 333 LILSTPVATFCAYSKAATSGLLIKGGDHLETLAKIKVMAFDKTGTITKGEFVVTHFQSLS 392
Query: 123 DDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHG 182
DD+ L TL YWVSSIESKSSHP+AAA+VDY RSL++EP PE V +F+NFPGEGI GKI G
Sbjct: 393 DDIDLNTLAYWVSSIESKSSHPLAAAIVDYGRSLSVEPEPEKVTEFENFPGEGICGKIEG 452
Query: 183 NVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIK 242
VIYIGN++I R G I + + GKT GY+YLGATP+G FSLSD+CR G EAI
Sbjct: 453 RVIYIGNKKIATRAGSETVPILQGEIERGKTTGYIYLGATPLGFFSLSDTCRLGVQEAIG 512
Query: 243 DLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVG 302
LKSLGIK+ +L GDS +AA+ AQ+QL H+ ++V+AELLP+ K +++ KK+G TAM+G
Sbjct: 513 QLKSLGIKTAMLTGDSQSAAMQAQEQLGHSLELVHAELLPEDKVKIISEFKKEGPTAMIG 572
Query: 303 DGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNV 362
DG+NDAPALAA DIGISMGISGSALA E+G++ILMSNDIRKIP+AIKLARKA K+++N+
Sbjct: 573 DGLNDAPALAAADIGISMGISGSALASETGNIILMSNDIRKIPEAIKLARKARRKVLENI 632
Query: 363 TLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKS 418
LS+ K A+L LA+ G+PLVW AV+ DVGTCL+VI NSMLLL+ G +S
Sbjct: 633 VLSIMTKAAILGLAIGGHPLVWAAVVADVGTCLLVIFNSMLLLRKGHNHGGKCCRS 688
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 473 | ||||||
| TAIR|locus:2126490 | 951 | HMA2 "heavy metal atpase 2" [A | 0.858 | 0.426 | 0.534 | 4e-121 | |
| TAIR|locus:2059083 | 1172 | HMA4 "heavy metal atpase 4" [A | 0.708 | 0.285 | 0.589 | 2.8e-119 | |
| TAIR|locus:2126500 | 542 | HMA3 "heavy metal atpase 3" [A | 0.386 | 0.337 | 0.586 | 2.3e-55 | |
| TIGR_CMR|GSU_2147 | 713 | GSU_2147 "cadmium-translocatin | 0.693 | 0.460 | 0.383 | 5.2e-49 | |
| UNIPROTKB|Q87UL7 | 752 | cadA-1 "Cadmium-translocating | 0.693 | 0.436 | 0.345 | 1.1e-44 | |
| TIGR_CMR|CHY_0860 | 686 | CHY_0860 "cation-transporting | 0.752 | 0.518 | 0.328 | 2.5e-43 | |
| TIGR_CMR|BA_0410 | 641 | BA_0410 "heavy metal-transport | 0.596 | 0.439 | 0.371 | 4.4e-42 | |
| UNIPROTKB|P63689 | 771 | ctpG "Probable cation-transpor | 0.672 | 0.412 | 0.340 | 5.1e-39 | |
| TIGR_CMR|SO_1689 | 753 | SO_1689 "cation transport ATPa | 0.676 | 0.424 | 0.349 | 1.6e-38 | |
| TIGR_CMR|BA_0595 | 788 | BA_0595 "heavy metal-transport | 0.761 | 0.456 | 0.307 | 1.8e-37 |
| TAIR|locus:2126490 HMA2 "heavy metal atpase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1091 (389.1 bits), Expect = 4.0e-121, Sum P(2) = 4.0e-121
Identities = 224/419 (53%), Positives = 285/419 (68%)
Query: 64 LILMA-VLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC 122
LIL V FCA +KAAT+GLL+KG DYLE LAK+K+VA DKTGT+TRGEF V DFQS+
Sbjct: 351 LILSTPVATFCALTKAATSGLLIKGADYLETLAKIKIVAFDKTGTITRGEFIVMDFQSLS 410
Query: 123 DDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHG 182
+D+SL +LLYWVSS ESKSSHPMAAA+VDYARS+++EP PE VED+QNFPGEGI+GKI G
Sbjct: 411 EDISLQSLLYWVSSTESKSSHPMAAAVVDYARSVSVEPKPEAVEDYQNFPGEGIYGKIDG 470
Query: 183 NVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIK 242
+YIGN+RI R GC + GGKT GYVY+G T G F+LSD+CRSG +A+K
Sbjct: 471 KEVYIGNKRIASRAGCLSVPDIDVDTKGGKTIGYVYVGETLAGVFNLSDACRSGVAQAMK 530
Query: 243 DLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD-GATAMV 301
+LKSLGIK +L GD+HAAA++AQ+QL +A D+V AELLP+ K E+++ LK++ G TAMV
Sbjct: 531 ELKSLGIKIAMLTGDNHAAAMHAQEQLGNAMDIVRAELLPEDKSEIIKQLKREEGPTAMV 590
Query: 302 GDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQN 361
GDG+NDAPALA DIGISMG+SGSALA E+G++ILMSNDIR+IP+AIKLA++A K+++N
Sbjct: 591 GDGLNDAPALATADIGISMGVSGSALATETGNIILMSNDIRRIPQAIKLAKRAKRKVVEN 650
Query: 362 VTLSXXXXXXXXXXXXXXXXXXWVAVLTDVGTCLVVIXXXXXXXXXXXXXXGGFWKSKYG 421
V +S W AVL DVGTCL+VI ++
Sbjct: 651 VVISITMKGAILALAFAGHPLIWAAVLADVGTCLLVILNSMLLLSDKHKTGNKCYRESSS 710
Query: 422 TFSLSCKKDE-----DKEA-----LNVKNCRSRCCEA-TSAKDMASTSLQGQTGPNPCC 469
+ L +K E D EA ++ K+C+ CC T K M + CC
Sbjct: 711 SSVLIAEKLEGDAAGDMEAGLLPKISDKHCKPGCCGTKTQEKAMKPAKASSDHSHSGCC 769
|
|
| TAIR|locus:2059083 HMA4 "heavy metal atpase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1034 (369.0 bits), Expect = 2.8e-119, Sum P(3) = 2.8e-119
Identities = 198/336 (58%), Positives = 256/336 (76%)
Query: 64 LILMA-VLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC 122
LIL V FCA +KAAT+GLL+K DYL+ L+K+K+VA DKTGT+TRGEF V DF+S+
Sbjct: 361 LILSTPVATFCALTKAATSGLLIKSADYLDTLSKIKIVAFDKTGTITRGEFIVIDFKSLS 420
Query: 123 DDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHG 182
D++L +LLYWVSS+ESKSSHPMAA +VDYA+S+++EP PE VED+QNFPGEGI+GKI G
Sbjct: 421 RDINLRSLLYWVSSVESKSSHPMAATIVDYAKSVSVEPRPEEVEDYQNFPGEGIYGKIDG 480
Query: 183 NVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIK 242
N I+IGN++I R GCS E GGKT GYVY+G G F+LSD+CRSG +A+
Sbjct: 481 NDIFIGNKKIASRAGCSTVPEIEVDTKGGKTVGYVYVGERLAGFFNLSDACRSGVSQAMA 540
Query: 243 DLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVG 302
+LKSLGIK+ +L GD+ AAA++AQ+QL + D+V+ +LLP+ K +++ KK+G TAMVG
Sbjct: 541 ELKSLGIKTAMLTGDNQAAAMHAQEQLGNVLDVVHGDLLPEDKSRIIQEFKKEGPTAMVG 600
Query: 303 DGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNV 362
DG+NDAPALA DIGISMGISGSALA ++G++ILMSNDIR+IP+A+KLAR+A K+++NV
Sbjct: 601 DGVNDAPALATADIGISMGISGSALATQTGNIILMSNDIRRIPQAVKLARRARRKVVENV 660
Query: 363 TLSXXXXXXXXXXXXXXXXXXWVAVLTDVGTCLVVI 398
LS W AVL DVGTCL+VI
Sbjct: 661 CLSIILKAGILALAFAGHPLIWAAVLVDVGTCLLVI 696
|
|
| TAIR|locus:2126500 HMA3 "heavy metal atpase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 109/186 (58%), Positives = 142/186 (76%)
Query: 64 LILMA-VLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC 122
LIL V FCA +KAAT+G L+K GD LE LAK+K+VA DKTGT+T+ EF V+DF+S+
Sbjct: 357 LILSTPVATFCALTKAATSGFLIKTGDCLETLAKIKIVAFDKTGTITKAEFMVSDFRSLS 416
Query: 123 DDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHG 182
++L LLYWVSSIE KSSHPMAAAL+DYARS+++EP P+ VE+FQNFPGEG++G+I G
Sbjct: 417 PSINLHKLLYWVSSIECKSSHPMAAALIDYARSVSVEPKPDIVENFQNFPGEGVYGRIDG 476
Query: 183 NVIYIGNRRIGPRTGCSKDSIAEAKCT--GGKTRGYVYLGATPVGTFSLSDSCRSGALEA 240
IYIGN+RI R GC D++ + + T GKT GY+Y+GA G+F+L D CR G +A
Sbjct: 477 QDIYIGNKRIAQRAGCLTDNVPDIEATMKRGKTIGYIYMGAKLTGSFNLLDGCRYGVAQA 536
Query: 241 IKDLKS 246
+K+LKS
Sbjct: 537 LKELKS 542
|
|
| TIGR_CMR|GSU_2147 GSU_2147 "cadmium-translocating P-type ATPase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 131/342 (38%), Positives = 190/342 (55%)
Query: 63 VLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC 122
+++ V I A S AA G+L+KGG YLE + +A DKTGT+T+G+ VTD +
Sbjct: 365 LVVSTPVAIVSAISNAARHGVLIKGGIYLEEAGTLSAIAFDKTGTLTKGKPVVTDIVPL- 423
Query: 123 DDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHG 182
+ + G LL +++E++S HP+AA++V A+ P V DF G+G G I G
Sbjct: 424 GETAEGELLQMAANLEARSEHPLAASIVKAAKDRGCTITP--VVDFTAVAGQGAQGTISG 481
Query: 183 NVIYIGNRRIGPRTGCSKDSI---AEAKCTGGKTRGYVYLGATP--VGTFSLSDSCRSGA 237
++YIG+ R+ S D I AE + GKT + LG+ VG +++D RS +
Sbjct: 482 KMVYIGSPRLFSEKNISIDEIVPQAERLESEGKT--VMILGSAERIVGIIAVADEVRSAS 539
Query: 238 LEAIKDLKSLGIK-SFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVE-LLKKD 295
AI LK GI+ + +L GD+ A A Q+ D AELLPQ K ++ LLK+
Sbjct: 540 AGAISSLKRAGIRHAVMLTGDNTATAKNIAAQV--GVDEFRAELLPQDKLTAIDGLLKEY 597
Query: 296 GATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKAS 355
G AMVGDGINDAPALA +GI+MG +G+ A+E+ + LMS+D+ K+P I L+RKA
Sbjct: 598 GKVAMVGDGINDAPALALSTVGIAMGSAGTDTALETADIALMSDDLAKLPFTILLSRKAL 657
Query: 356 TKLIQNVTLSXXXXXXXXXXXXXXXXXXWVAVLTDVGTCLVV 397
+ QN+T S W+A+L D+G L+V
Sbjct: 658 AIIRQNITFSLCIKAVAILAVFPGWLTLWLAILADMGASLLV 699
|
|
| UNIPROTKB|Q87UL7 cadA-1 "Cadmium-translocating P-type ATPase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 461 (167.3 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 118/342 (34%), Positives = 183/342 (53%)
Query: 63 VLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC 122
++I V I + AA G+L+KGG YLE+ K+ +ALDKTGT+T G+ TD+ +
Sbjct: 410 LVISTPVTIVSGLAAAARKGILIKGGVYLEMGEKLDYLALDKTGTLTHGKPVQTDYVPLD 469
Query: 123 DDVSLGTLLYWVSSIESKSSHPMAAALVDYA-RSLAIEPVPENVEDFQNFPGEGIFGKIH 181
V+ +S+ +S HP++ A+ A SL + V F+ G G+ G+++
Sbjct: 470 PTVAESAPAI-AASLAGRSDHPVSQAIAKAADNSLTLYEVTA----FEALGGRGVKGEVN 524
Query: 182 GNVIYIGNRRIGPRTG-CSK--DSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGAL 238
G + ++GN R+ G CS ++ +A GKT + + P+ F+++D+ + +
Sbjct: 525 GQMYHLGNHRLVEELGLCSPALEARLDALEMQGKTVVLLLDASGPIALFAVADTVKETSR 584
Query: 239 EAIKDLKSLGIKSFILAGDS-HAAALYAQDQLDHAFDMVYAELLPQHKEELVELL-KKDG 296
EAI L LGIK+ +L GD+ H A A DQ+ D LLP K +E L ++
Sbjct: 585 EAIAQLHELGIKTVMLTGDNPHTAKAIA-DQV--GIDEAQGNLLPADKLSAIEALYARNH 641
Query: 297 ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKAST 356
MVGDGINDAPALA +IG +M +G+ A+E+ V LM +D+RKIP I+L+R+ S
Sbjct: 642 RVGMVGDGINDAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKIPTFIRLSRQTSA 701
Query: 357 KLIQNVTLSXXXXXXXXXXXXXXXXXXWVAVLTDVGTCLVVI 398
L QN+ L+ W+AV D+G L+V+
Sbjct: 702 VLKQNIILAIATKVLFIGITFAGLATMWMAVFADMGVSLLVV 743
|
|
| TIGR_CMR|CHY_0860 CHY_0860 "cation-transporting ATPase, E1-E2 family, selenocysteine-containing" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 460 (167.0 bits), Expect = 2.5e-43, P = 2.5e-43
Identities = 126/384 (32%), Positives = 207/384 (53%)
Query: 27 IYHPLQSLAVAAVIFGLPAILIRSIASI---KSLTFNI-----NVLILMAVLIFCAFSKA 78
+Y PL LA+A ++ +P +L+ + ++LTF + +LI + + + + A
Sbjct: 307 VYTPLV-LALAFLVAFIPPLLLGGEFRLWIYRALTFLVVSCPCALLIAVPISVISSLGAA 365
Query: 79 ATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYW--VSS 136
A G++VKG LE LA + DKTGT+TRGE VT+ ++ D +W V S
Sbjct: 366 ARRGIVVKGSRNLEQLALCDTIVFDKTGTLTRGEMEVTEVIAVSPD-------FWPAVYS 418
Query: 137 IESKSSHPMAAALVDYARSLAIEPVPE-NVEDFQNFPGEGIFGKIHGNVIYIGNRR-IGP 194
+E +++HP+A A++ +++ E E V +F+ PG G+ G++ G+ +IG+ + I
Sbjct: 419 LEKRATHPLAKAII---KAVPAEYQKEIEVLNFRQIPGLGVLGQVEGSNYFIGSPKGIKE 475
Query: 195 RTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFIL 254
++ E + G+T V PV +++D R A EAI+++K+LG+ +L
Sbjct: 476 IPESFIKTLQEIE-EKGQTAILVAKENIPVALLAVADVIRDDAGEAIRNIKALGLTPVLL 534
Query: 255 AGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATA-MVGDGINDAPALAA 313
+GDS AL ++L+ Y E+LPQ K +++ L++ G MVGDGINDAPALAA
Sbjct: 535 SGDSKKVALRVSEELE--IGKWYGEVLPQEKLTVIKELQESGRKVIMVGDGINDAPALAA 592
Query: 314 VDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSXXXXXXXX 373
D GI+MG GS LA + ++L+S + IP IKLAR++ + QN+ L+
Sbjct: 593 ADAGIAMG-EGSGLATTTAKIVLLSGKLNNIPFLIKLARQSRAIVKQNIILAIGLKLLAL 651
Query: 374 XXXXXXXXXXWVAVLTDVGTCLVV 397
W+A+ D+G L+V
Sbjct: 652 MAILPGWLNLWLAIGADIGVALLV 675
|
|
| TIGR_CMR|BA_0410 BA_0410 "heavy metal-transporting ATPase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 446 (162.1 bits), Expect = 4.4e-42, P = 4.4e-42
Identities = 111/299 (37%), Positives = 177/299 (59%)
Query: 74 AFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYW 133
A S A G+L KGG +LE LA VK +A DKTGT+T G+ TVTD + ++++ +L
Sbjct: 309 AISNGARNGILFKGGIHLERLASVKAIAFDKTGTLTEGKPTVTDVY-VRENMTEKEVLSI 367
Query: 134 VSSIESKSSHPMAAALVDYAR---SLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNR 190
++IES S+HP+A ++V YA+ + ++ PENVED F +GIF IG
Sbjct: 368 TAAIESHSTHPLAESIVKYAQHTYDITLKK-PENVEDVTGFGLKGIF---ESKAYKIGKA 423
Query: 191 R-IGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGI 249
IG T + ++ + GKT Y+ +G +L D+ R + AI++L+S+G+
Sbjct: 424 DFIGEETKTFHNGVSASLEKEGKTVVYISDEEGILGLIALKDTLRQETIAAIRELQSIGV 483
Query: 250 KSFILAGDSH--AAALYAQDQLDHAFDMVYAELLPQHKEELVELLK-KDGATAMVGDGIN 306
++ ++ GD+ A A+ ++ + YA LP+ K E ++ LK K G AMVGDGIN
Sbjct: 484 EAIMITGDNEETAKAIASESNIKE----YYASCLPETKVETIKKLKEKYGTVAMVGDGIN 539
Query: 307 DAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLS 365
DAPALA IG++MG G+ +A+E+ V+LM N++ ++ +AI+L+++ + + QNV S
Sbjct: 540 DAPALATASIGVAMG-EGTDVALETADVVLMKNELSRLSQAIRLSKRMNRIVKQNVIFS 597
|
|
| UNIPROTKB|P63689 ctpG "Probable cation-transporting ATPase G" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 424 (154.3 bits), Expect = 5.1e-39, P = 5.1e-39
Identities = 114/335 (34%), Positives = 175/335 (52%)
Query: 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEI 93
+A + G P + I + + I + V + + A+ G+L+KGG LE
Sbjct: 393 IAGTGSVLGNPLVWIERALVVLVAAAPCALAIAVPVTVVASIGAASRLGVLIKGGAALET 452
Query: 94 LAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYA 153
L ++ VALDKTGT+T V D + + + +L +++E++S HP+A A+
Sbjct: 453 LGTIRAVALDKTGTLTANRPVVIDVATT-NGATREEVLAVAAALEARSEHPLAVAV---- 507
Query: 154 RSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCS-KDSIAEAKCTGGK 212
LA D Q PG G+ G++ G V+ +G R G D +A + G
Sbjct: 508 --LAATQATTAASDVQAVPGAGLIGRLDGRVVRLG--RPGWLDAAELADHVACMQ-QAGA 562
Query: 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHA--AALYAQDQLD 270
T V +G ++ D R A E + L++ G + +L GD+HA AAL AQ ++
Sbjct: 563 TAVLVERDQQLLGAIAVRDELRPEAAEVVAGLRTGGYQVTMLTGDNHATAAALAAQAGIE 622
Query: 271 HAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDIGISMGISGSALAME 330
V+AEL P+ K LV L+ TAMVGDG+NDAPALAA D+GI+MG G+ +A+E
Sbjct: 623 Q----VHAELRPEDKAHLVAQLRARQPTAMVGDGVNDAPALAAADLGIAMGAMGTDVAIE 678
Query: 331 SGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLS 365
+ V LM D+R +P+A+ AR++ ++QNV LS
Sbjct: 679 TADVALMGQDLRHLPQALDHARRSRQIMVQNVGLS 713
|
|
| TIGR_CMR|SO_1689 SO_1689 "cation transport ATPase, E1-E2 family" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 419 (152.6 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 125/358 (34%), Positives = 198/358 (55%)
Query: 26 YIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLV 85
Y+ P +L+ A V+ L ++LI IA +L + I+++V +AA G+LV
Sbjct: 359 YLVGPEPALSHALVV--LTSVLI--IACPCALGLATPMSIMVSV------GRAAQMGVLV 408
Query: 86 KGGDYLEILAKVKMVALDKTGTVTRGEFTVTDF-------QSI-CDDVSLGTLLYWVSSI 137
K G+ L+ +KV V LDKTGTVT+G+ VTD Q++ DD S LL ++S+
Sbjct: 409 KNGEALQSASKVDCVVLDKTGTVTQGKPEVTDIHWHGEYEQALSADDKS--ALLGAIASL 466
Query: 138 ESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNR------R 191
E S HP+A A+V Y + +I P+P E F N G+GI G+++ +GN+ +
Sbjct: 467 EQHSEHPLANAIVSYVKQASI-PLPAT-EIFTNHQGKGIEGRVNYTDYLVGNQALMTAFK 524
Query: 192 IGPRTG-CSKDSIAEAKCTG-----GKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLK 245
+ P T + + +E T GKT YV V T +++D ++ A EAI ++
Sbjct: 525 VPPLTVLANSNETSELDATAHFAKQGKTPIYVAEAGKLVATIAIADPIKADAKEAISAIR 584
Query: 246 SLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDG 304
S GI+ +L GD+ A +Q+ + V A +LP+ K++ ++ L++ G AMVGDG
Sbjct: 585 SQGIRVVLLTGDNPQTAQAVAEQV--GIEEVIAGVLPEQKQQHIKALQQQGHVVAMVGDG 642
Query: 305 INDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNV 362
INDAPAL + D+GI+MG SG+ +A+ES + L+S+ + I L+R T + QN+
Sbjct: 643 INDAPALMSADVGIAMG-SGTEVAIESADMTLLSHQLIVIANLFALSRATMTNIKQNL 699
|
|
| TIGR_CMR|BA_0595 BA_0595 "heavy metal-transporting ATPase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 410 (149.4 bits), Expect = 1.8e-37, P = 1.8e-37
Identities = 118/384 (30%), Positives = 189/384 (49%)
Query: 28 YHPLQSLAVAAVIFGLPAILIRSIAS---IKSLTFNIN----VLILMAVL-IFCAFSKAA 79
Y P+ + A + F P IL + S ++L F + L++ L F A+
Sbjct: 404 YTPVVVITAAIMAFIPPLILEGATFSDWIYRALVFLVISCPCALVVSIPLGFFGGIGGAS 463
Query: 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIES 139
+G+LVKG +YLE L VK + DKTGT+T+G F VT + + ++ LL + + E
Sbjct: 464 KSGVLVKGSNYLEALNDVKYIVFDKTGTLTKGVFKVTKMEP-SEGITNEELLEYAAFAEV 522
Query: 140 KSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCS 199
S+HP+A ++ + R E + ++D+ G G K+ G I+ GN ++
Sbjct: 523 YSNHPIAQSIRNAYRKSIDEKI---IDDYNEISGHGTVVKVQGKEIFAGNAKL-----MR 574
Query: 200 KDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFI-LAGDS 258
K++I + T +V + G +SD + + +AI+ LK LGIK + L GD+
Sbjct: 575 KENITFKQPETVGTLVHVAVDGKYAGYIVISDEVKEDSKQAIQKLKELGIKKTVMLTGDA 634
Query: 259 HAAALYAQDQLDHAFDMVYAELLPQHKEELVELLK--KDGA--TAMVGDGINDAPALAAV 314
+L D V+AELLPQ K E +E + K G A VGDGIND P LA
Sbjct: 635 KLVGEAVGKEL--GLDEVHAELLPQQKVEEIEKIDAAKHGKEKVAFVGDGINDTPVLARA 692
Query: 315 DIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSXXXXXXXXX 374
D+GI+MG GS A+E+ +++M+++ KI A+ +A++ + QN+ +
Sbjct: 693 DVGIAMGGLGSDAAIEAADIVIMTDEPSKIATAVNIAKRTRRIVWQNIIFALGVKGLVLL 752
Query: 375 XXXXXXXXXWVAVLTDVGTCLVVI 398
W AV +DVG L+ +
Sbjct: 753 LGAFGIATMWEAVFSDVGVTLLAV 776
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 473 | |||
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-107 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 5e-99 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 3e-93 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-69 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 3e-59 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 2e-42 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-34 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 4e-22 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-16 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-15 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-15 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 3e-15 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 5e-15 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-14 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-14 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 7e-14 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-12 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-11 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 4e-10 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 4e-10 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 4e-10 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 7e-10 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 4e-08 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 2e-06 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 6e-06 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 6e-05 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 2e-04 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 0.001 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 328 bits (842), Expect = e-107
Identities = 147/390 (37%), Positives = 214/390 (54%), Gaps = 28/390 (7%)
Query: 24 LGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNI-----NVLILMAVLIFCAFSKA 78
Y P+ A+ + ++L + ++I A S A
Sbjct: 168 FARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAA 227
Query: 79 ATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIE 138
A G+L+KGG LE LAK+K VA DKTGT+T G V D +L ++ E
Sbjct: 228 ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA-------EVLRLAAAAE 280
Query: 139 SKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGC 198
SSHP+A A+VDYAR ENVE + PGEG+ + G + IGN R
Sbjct: 281 QASSHPLARAIVDYARKR------ENVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVG 334
Query: 199 SKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSF-ILAGD 257
++ + GKT +V T +G LSD R A EAI +LK+LGI+ +L GD
Sbjct: 335 ARP------ESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGD 388
Query: 258 SHAAALYAQDQLDHAFDMVYAELLPQHKEELV-ELLKKDGATAMVGDGINDAPALAAVDI 316
A A +L D V+AELLP+ K E+V EL +K G AMVGDGINDAPALAA D+
Sbjct: 389 RRAVAERVAREL--GIDEVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADV 446
Query: 317 GISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLA 376
GI+MG SGS +A+E+ V+L+++D+ ++P+AI+LAR+ + QNV +++ + +++LA
Sbjct: 447 GIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLA 506
Query: 377 VAGYPLVWVAVLTDVGTCLVVILNSMLLLK 406
+ G +W+AVL G+ ++VILN++ LL+
Sbjct: 507 LFGVLPLWLAVLGHEGSTVLVILNALRLLR 536
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 307 bits (789), Expect = 5e-99
Identities = 146/384 (38%), Positives = 214/384 (55%), Gaps = 18/384 (4%)
Query: 34 LAVAAVIFGLPAILIRSIASIKSLTFNI----NVLILMA-VLIFCAFSKAATTGLLVKGG 88
LA+A + F + L A ++L + L L V I A AA G+L+KGG
Sbjct: 178 LAIALLTFVVWLALGALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGG 237
Query: 89 DYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICD-DVSLGTLLYWVSSIESKSSHPMAA 147
D LE LAKVK V DKTGT+T G+ TV D + + D +S LL +++E SSHP+A
Sbjct: 238 DALEKLAKVKTVVFDKTGTLTTGKPTVVDIEPLDDASISEEELLALAAALEQSSSHPLAR 297
Query: 148 ALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGN-VIYIGNRR---IGPRTGCSKDSI 203
A+V YA+ +E ED + PG+G+ + G + IGN R + + +
Sbjct: 298 AIVRYAKKRGLELP--KQEDVEEVPGKGVEATVDGGEEVRIGNPRFLELAIEPISASPDL 355
Query: 204 AEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLK-SLGIKSFILAGDSHAAA 262
+ GKT +V + +G +L D R A EAI LK + GIK +L GD+ +AA
Sbjct: 356 LNEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAA 415
Query: 263 LYAQDQLDHAFDMVYAELLPQHKEELV-ELLKKDGATAMVGDGINDAPALAAVDIGISMG 321
+L D V+AELLP+ K +V EL ++ G AMVGDGINDAPALAA D+GI+MG
Sbjct: 416 EAVAAEL--GIDEVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG 473
Query: 322 ISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAG-Y 380
+GS +A+E+ ++L+++D+ +P AI L+RK + QN+ ++ + LA G
Sbjct: 474 -AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLL 532
Query: 381 PLVWVAVLTDVGTCLVVILNSMLL 404
PL +AVL G+ ++V+LNS+ L
Sbjct: 533 PLWLLAVLLHEGSTVLVVLNSLRL 556
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 297 bits (762), Expect = 3e-93
Identities = 143/393 (36%), Positives = 208/393 (52%), Gaps = 37/393 (9%)
Query: 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIF---CAF------------SKA 78
L +AA+ F L + + + +AVL+ CA +A
Sbjct: 334 LVIAALTFALWPLFGGG-------DWETALYRALAVLVIACPCALGLATPTAILVGIGRA 386
Query: 79 ATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIE 138
A G+L+KGG+ LE LAKV V DKTGT+T G+ VTD ++ D LL +++E
Sbjct: 387 ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDGDEDE--LLALAAALE 444
Query: 139 SKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRR----IGP 194
S HP+A A+V A + V EDF+ PG G+ ++ G + +GN R G
Sbjct: 445 QHSEHPLAKAIVKAAAERGLPDV----EDFEEIPGRGVEAEVDGERVLVGNARLLGEEGI 500
Query: 195 RTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFIL 254
+ I EA + GKT +V + VG +L+D R A EAI LK+LGIK +L
Sbjct: 501 DLPLLSERI-EALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVML 559
Query: 255 AGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGAT-AMVGDGINDAPALAA 313
GD+ A +L D V AELLP+ K E+V L+ +G AMVGDGINDAPALAA
Sbjct: 560 TGDNRRTAEAIAKELG--IDEVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAA 617
Query: 314 VDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVL 373
D+GI+MG SG+ +A+E+ V+LM +D+ +P+AI L+R + QN+ + +
Sbjct: 618 ADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAI 676
Query: 374 VLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLK 406
LA G W+A L G+ ++V+LN++ LL+
Sbjct: 677 PLAAGGLLTPWIAALAMSGSSVLVVLNALRLLR 709
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 231 bits (590), Expect = 2e-69
Identities = 120/342 (35%), Positives = 182/342 (53%), Gaps = 20/342 (5%)
Query: 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLIL-------MAVL--IFCAFSKAATTGLL 84
+A+A + F + IL +L + VLI+ +A I A AA G+L
Sbjct: 214 IAIALITFVIWLILGADFVF--ALEVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVL 271
Query: 85 VKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHP 144
+K GD LE A + V DKTGT+T+G+ TVTD + LL +++E+ S HP
Sbjct: 272 IKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVF-GESDRDELLALAAALEAGSEHP 330
Query: 145 MAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIA 204
+A A+V YA++ I V DF+ PG G+ G + G+ I +GN ++ G D
Sbjct: 331 LAKAIVSYAKAKGI--TLSQVSDFKAIPGIGVEGTVEGHTIQLGNEKLLGENGLKTDGEV 388
Query: 205 EAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALY 264
E GG T V + G +L+D + A E I+ LK GI+ +L GD+ A
Sbjct: 389 EEG--GGTTSVLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKA 446
Query: 265 AQDQLDHAFDMVYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPALAAVDIGISMGIS 323
+L + V AE+LP K L++ L++ G AMVGDGINDAPALA D+GI++G +
Sbjct: 447 VAKEL--GIENVRAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIG-A 503
Query: 324 GSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLS 365
G+ +A+E+ V+L+ ND+ + AI L+RK ++ QN+ +
Sbjct: 504 GTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWA 545
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 3e-59
Identities = 139/412 (33%), Positives = 212/412 (51%), Gaps = 42/412 (10%)
Query: 6 KWPAPSVMASGLLLAL--------SFLGYIYHPLQSLAVAAVIFGLP-AILIRSIASIKS 56
+ P++M LL+ L + +IY L ++ G P A++I + A+I S
Sbjct: 358 RIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGL-----TLLLIGCPCALVISTPAAITS 412
Query: 57 LTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVT 116
+ AA G L+KGG LE L +V VA DKTGT+T G+ VT
Sbjct: 413 -----------------GLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVT 455
Query: 117 DFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGI 176
D +S LL +++E S+HP+A A+V A+ + +PE E + G GI
Sbjct: 456 DIHPA-TGISESELLALAAAVEQGSTHPLAQAIVREAQVRGL-AIPE-AESQRALAGSGI 512
Query: 177 FGKIHGNVIYI-GNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRS 235
G+++G + I ++ P I E + + GKT V +G +L D+ R+
Sbjct: 513 EGQVNGERVLICAPGKLPPLADAFAGQINELE-SAGKTVVLVLRNDDVLGLIALQDTLRA 571
Query: 236 GALEAIKDLKSLGIKSFILAGDS-HAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKK 294
A +AI +LK+LGIK +L GD+ AAA A +L F A LLP+ K + V L +
Sbjct: 572 DARQAISELKALGIKGVMLTGDNPRAAAAIAG-ELGIDFR---AGLLPEDKVKAVTELNQ 627
Query: 295 DGATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKA 354
AMVGDGINDAPA+ A IGI+MG SG+ +A+E+ L N +R + + I+L+R
Sbjct: 628 HAPLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRAT 686
Query: 355 STKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVILNSMLLLK 406
+ QN+T+++ +K LV + G +W+AVL D G +V N++ LL+
Sbjct: 687 HANIRQNITIALGLKAIFLVTTLLGITGLWLAVLADSGATALVTANALRLLR 738
|
Length = 741 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 2e-42
Identities = 90/387 (23%), Positives = 158/387 (40%), Gaps = 45/387 (11%)
Query: 32 QSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIF---CAF------------S 76
+ ++ L L I + +L + VL+ A +
Sbjct: 160 FIFILFLLLLALAVFLYLFIRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDA 219
Query: 77 KAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSS 136
+ A G+LV+ + LE L KV + DKTGT+T+ + T+ I +
Sbjct: 220 RLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVY-IDGGKEDNSSSLVACD 278
Query: 137 IESKSSHPMAAALVDYARSLAIEPVP-ENVEDFQNFPGEGIFGKI---------HGNVIY 186
S PM AL+ A + + + FP + ++ +
Sbjct: 279 NNYLSGDPMEKALLKSAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFV 338
Query: 187 IGN-RRIGPRTGCSKDSIAEAKCTGGKTRGYVY----LGATPVGTFSLSDSCRSGALEAI 241
G I R ++ E G + + +G + D R A E I
Sbjct: 339 KGAPEFILERCNNYEEKYLELARQGLRVLAFASKELEDDLEFLGLITFEDPLRPDAKETI 398
Query: 242 KDLKSLGIKSFILAGDSH--AAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGA-T 298
++LK+ GIK ++ GD+ A A+ + +D V+A + P+ K ++VE L+K G
Sbjct: 399 EELKAAGIKVVMITGDNVLTAKAIAKELGID-----VFARVSPEQKLQIVEALQKKGHIV 453
Query: 299 AMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKL 358
AM GDG+NDAPAL D+GI+MG A + ++L+ +D+ I KA+K RK + +
Sbjct: 454 AMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDDLSAIVKAVKEGRKIFSNI 507
Query: 359 IQNVTLSVTVKGAVLVLAVAGYPLVWV 385
N+ ++ ++ LA+ ++ +
Sbjct: 508 KSNIFWAIAYNLILIPLALLLIVIILL 534
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 1e-34
Identities = 89/299 (29%), Positives = 151/299 (50%), Gaps = 20/299 (6%)
Query: 71 IFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTL 130
I +AA G+LV+ D L+ + + + DKTGT+T G+ V ++ + V
Sbjct: 491 IISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTF-NGVDEAQA 549
Query: 131 LYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNR 190
L +++E SSHP+A A++D A + + P+ V F+ G G+ G+ G+ + +GN+
Sbjct: 550 LRLAAALEQGSSHPLARAILDKAGDMTL---PQ-VNGFRTLRGLGVSGEAEGHALLLGNQ 605
Query: 191 RIGPRTGCSKDSIA---EAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSL 247
+ ++ A+ + G T + + ++ D RS ++ A++ L
Sbjct: 606 ALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKA 665
Query: 248 GIKSFILAGD----SHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVG 302
G + +L GD ++A A A D V A +LP K E ++ L+ G AMVG
Sbjct: 666 GYRLVMLTGDNPTTANAIAKEA------GIDEVIAGVLPDGKAEAIKRLQSQGRQVAMVG 719
Query: 303 DGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQN 361
DGINDAPALA D+GI+MG GS +A+E+ + LM + + + A+ ++R + QN
Sbjct: 720 DGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQN 777
|
Length = 834 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 99.3 bits (248), Expect = 4e-22
Identities = 64/200 (32%), Positives = 92/200 (46%), Gaps = 44/200 (22%)
Query: 234 RSGALEAIKDLKSLGIKSFILAGDS-------------HAAALYAQ----DQLDHAFDM- 275
R EAI++L+ GIK +++ GD A A A +LD D
Sbjct: 549 REDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEE 608
Query: 276 ---------VYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPALAAVDIGISMGISGS 325
V+A + P+ K +VE L+K G AM GDG+NDAPAL A D+GI+MG G+
Sbjct: 609 LAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGT 668
Query: 326 ALAMESGHVILMSNDIRKIPKAIKLARKA---STKLIQNVTLSVTVKGAVLVLAVA---- 378
A E+ ++L+ ++ I A+ R+ K I LS V G VL L +
Sbjct: 669 DAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILY-LLSKNV-GEVLTLLIYSLFN 726
Query: 379 --GYP-----LVWVAVLTDV 391
P L+W+ +LTD
Sbjct: 727 LFFLPLTPLQLLWINLLTDS 746
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 83.0 bits (205), Expect = 1e-16
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 39/204 (19%)
Query: 225 GTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAAL--------------------- 263
G ++D R G EA+ L + G++ ++ GDS A+
Sbjct: 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKL 580
Query: 264 --YAQDQLDHAFD--MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGI 318
QL V+A P+HK ++V+ L+K G AM GDG+NDAPAL DIG+
Sbjct: 581 DAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGV 640
Query: 319 SMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQN-VTLSVTVKGAVLVL-- 375
+MG +G+ +A E+ +IL +D I AI+ K I+N +T ++ A L L
Sbjct: 641 AMGQTGTDVAKEAADMILTDDDFATILSAIEEG-KGIFNNIKNFITFQLSTSVAALSLIA 699
Query: 376 --AVAGYP-------LVWVAVLTD 390
+ G+P ++W+ +L D
Sbjct: 700 LATLMGFPNPLNAMQILWINILMD 723
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 1e-15
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 220 GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGD--------SHAAALYAQDQL-- 269
G T +G + D R G EA+++ + GI ++ GD + + L
Sbjct: 570 GLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAM 629
Query: 270 ---------DHAFD------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAA 313
D V A P K+ LV +LK G A+ GDG NDAPAL
Sbjct: 630 EGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKL 689
Query: 314 VDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVL 373
D+G SMGISG+ +A E+ +IL+ ++ I +A+K R + + + +TV +
Sbjct: 690 ADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAV 749
Query: 374 VLAVAGYPLVWVAVLTDV 391
+L G + + LT V
Sbjct: 750 ILTFVGSCISSTSPLTAV 767
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 78.4 bits (193), Expect = 2e-15
Identities = 81/330 (24%), Positives = 133/330 (40%), Gaps = 49/330 (14%)
Query: 61 INVLILMAVLI---------------FCAFSKAATTGLLVKGGDYLEILAKVKMVALDKT 105
I+V +L+A+L+ + ++ G +E V + LDKT
Sbjct: 248 ISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKT 307
Query: 106 GTVTRGEFTVTDFQSICDDVSLGTLL--YWVSSIESKSSHPMAAALVDYARSLAI--EPV 161
GT+T G ++F V TL ++S+ P ++V A+ L I + V
Sbjct: 308 GTITLGNRLASEFIPA-QGVDEKTLADAAQLASL--ADDTPEGKSIVILAKQLGIREDDV 364
Query: 162 PENVEDFQNFPGE----------------GIFGKIHGNVIYIGNRRIGPRTGCSKDSIAE 205
F F + G I +V G I + D +A
Sbjct: 365 QSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEANGGH-IPTDLDQAVDQVAR 423
Query: 206 AKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSH-AAALY 264
G T V G L D + G E L+ +GIK+ ++ GD+ AA
Sbjct: 424 Q----GGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAI 479
Query: 265 AQDQLDHAFDMVYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPALAAVDIGISMGIS 323
A + D AE P+ K L+ + +G AM GDG NDAPALA D+G++M S
Sbjct: 480 AAEA---GVDDFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-S 535
Query: 324 GSALAMESGHVILMSNDIRKIPKAIKLARK 353
G+ A E+ +++ + +D K+ + + + ++
Sbjct: 536 GTQAAKEAANMVDLDSDPTKLIEVVHIGKQ 565
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 3e-15
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 42/210 (20%)
Query: 222 TPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAAL----------YAQDQLDH 271
T +G + D R +AI+ ++ GI+ ++ GD+ A +D
Sbjct: 527 TFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFK 586
Query: 272 AFD-------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPAL 311
+F ++++ + P HK ELVELL++ G AM GDG+NDAPAL
Sbjct: 587 SFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPAL 646
Query: 312 AAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKA--STKLIQNVTLSVTVK 369
DIGI+MG SG+ +A E+ ++L ++ I A++ R + K +S +
Sbjct: 647 KKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIG 705
Query: 370 GAVLVLAVA--GYP-------LVWVAVLTD 390
V + A G P L+WV ++TD
Sbjct: 706 EVVCIFLTAALGIPEGLIPVQLLWVNLVTD 735
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 5e-15
Identities = 86/292 (29%), Positives = 135/292 (46%), Gaps = 57/292 (19%)
Query: 102 LDKTGTVTRGEFTVTDFQSICDDVSLGTL--LYWVSSI-----ESKSSHPMAAALVDYAR 154
LDKTGT+T G ++F + VS L ++S+ E +S +V+ A+
Sbjct: 304 LDKTGTITLGNRQASEFIPV-PGVSEEELADAAQLASLADETPEGRS-------IVELAK 355
Query: 155 SLAIEPVPENVE----DFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTG 210
L IE + E+ +F F + ++ G V G R I R G + G
Sbjct: 356 KLGIE-LREDDLQSHAEFVPFTAQT---RMSG-VDLPGGREI--RKGAVDAIRRYVRERG 408
Query: 211 GKTRGYV--------YLGATP---------VGTFSLSDSCRSGALEAIKDLKSLGIKSFI 253
G + LG TP +G L D + G E +L+ +GIK+ +
Sbjct: 409 GHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVM 468
Query: 254 LAGDSH--AAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPA 310
+ GD+ AAA+ A+ +D D + AE P+ K L+ + +G AM GDG NDAPA
Sbjct: 469 ITGDNPLTAAAIAAEAGVD---DFI-AEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPA 524
Query: 311 LAAVDIGISMGISGSALAMESGHVI-LMSN-----DIRKIPKAIKLARKAST 356
LA D+G++M SG+ A E+ +++ L SN ++ +I K + + R A T
Sbjct: 525 LAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALT 575
|
Length = 681 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 2e-14
Identities = 58/231 (25%), Positives = 79/231 (34%), Gaps = 56/231 (24%)
Query: 97 VKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSL 156
+K V D GT+T GE V + + AL++ A +L
Sbjct: 1 IKAVVFDLDGTLTDGEPVVPEAE----------------------------ALLEAAAAL 32
Query: 157 AIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGY 216
+ V E N+ G + R + E +
Sbjct: 33 GVAIVIAAGE----------------NLTKEGREELVRRLLLRALAGEELLEELLRAGAT 76
Query: 217 VYLGATPV--GTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD 274
V V G +L+D GA EA+K+LK GIK IL GD+ A L
Sbjct: 77 VVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDA 136
Query: 275 MVYAEL-------LPQHK--EELVELLKKD-GATAMVGDGINDAPALAAVD 315
+V A+L P K E +E L MVGDG+ND PA A
Sbjct: 137 LVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 75.1 bits (184), Expect = 2e-14
Identities = 73/306 (23%), Positives = 129/306 (42%), Gaps = 30/306 (9%)
Query: 66 LMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDV 125
L++ + + +L K G +E V ++ LDKTGT+T G F +
Sbjct: 267 LLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS-S 325
Query: 126 SLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVI 185
S L+ P ++V A I+ +P+ V ++ F E ++ G +
Sbjct: 326 SFERLVKAAYESSIADDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAET---RMSG--V 379
Query: 186 YIGNRRIGPRTGCSKDSIAEAKCTGGKT----RGYV----YLGATPV---------GTFS 228
R + G + K GG V G TP+ G
Sbjct: 380 KFTTREV--YKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILGVIY 437
Query: 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEEL 288
L D + G +E ++L+ +GI++ + GD+ A A + D AE P+ K +
Sbjct: 438 LKDVIKDGLVERFRELREMGIETVMCTGDNELTA--ATIAKEAGVDRFVAECKPEDKINV 495
Query: 289 VELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKA 347
+ + G AM GDG NDAPALA ++G++M SG+ A E+ ++I + ++ K+ +
Sbjct: 496 IREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEV 554
Query: 348 IKLARK 353
+ + ++
Sbjct: 555 VLIGKQ 560
|
Length = 673 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 74.0 bits (182), Expect = 7e-14
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 25/123 (20%)
Query: 239 EAIKDLKSLGIKSFILAGDS--------HAAALYAQ-------------DQLDHAFD--M 275
A+K LK+ G+ IL GDS H L A D+L + +
Sbjct: 557 PALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTT 616
Query: 276 VYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHV 334
++A L P HKE +V LLK++G +GDGINDAPAL A DIGIS+ +A E+ +
Sbjct: 617 LFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADI 675
Query: 335 ILM 337
IL+
Sbjct: 676 ILL 678
|
Length = 902 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 2e-12
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 225 GTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDS--------HAAALYAQDQL------- 269
G D + EAI L GI +L GD+ + A D L
Sbjct: 508 GFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDANDFLLGADIEE 567
Query: 270 --DHAFD------MVYAELLPQHKEELVELLKKDGAT-AMVGDGINDAPALAAVDIGISM 320
D ++A L P K ++ LLKK G T +GDGINDAPAL D+GIS+
Sbjct: 568 LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV 627
Query: 321 GISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVT 367
+ + +A E+ +IL+ + + + + R +++ + ++ +
Sbjct: 628 D-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTAS 673
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 2e-11
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 267 DQLDHAF----DMVYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPALAAVDIGISMG 321
+QLD ++V+A PQ K +VE ++ GA A+ GDG+ND+PAL DIG++MG
Sbjct: 650 EQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG 709
Query: 322 ISGSALAMESGHVILMSNDIRKIPKAIKLAR 352
I+GS ++ ++ +IL+ ++ I ++ R
Sbjct: 710 IAGSDVSKQAADMILLDDNFASIVTGVEEGR 740
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 4e-10
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 272 AFDMVYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPALAAVDIGISMGISGSALAME 330
A +V A PQ K +++E L + A AM GDG+ND+P+L ++GI+MGI+GS +A +
Sbjct: 721 ALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKD 780
Query: 331 SGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVK--GAVLVLAV 377
+ ++L ++ I AI+ R+ I L + + ++L +
Sbjct: 781 ASDIVLSDDNFASILNAIEEGRRM-FDNIMKFVLHLLAENVAEAILLII 828
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 4e-10
Identities = 84/320 (26%), Positives = 132/320 (41%), Gaps = 66/320 (20%)
Query: 91 LEILAKVKMVALDKTGTVTRGEFTVTDFQSIC--------DDVSLGTLLYWVSSIESKSS 142
+E LA + ++ DKTGT+T + ++ + I DDV LLY + +
Sbjct: 280 IEELAGMDILCSDKTGTLTLNKLSIDE---ILPFFNGFDKDDV----LLYAALASREEDQ 332
Query: 143 HPMAAALVDYARSLAIEPVPENVEDFQNF-PGEG-----IFGKIHGNVIYI--GNRRIGP 194
+ A++ A+ L V +F F P + + G + G ++
Sbjct: 333 DAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVIL 392
Query: 195 RTGCSKDSIA---EAKCTGGKTRGYVYLGATP---------VGTFSLSDSCRSGALEAIK 242
+K I E K +RGY LG +G L D R E I+
Sbjct: 393 DLCDNKKEIEEKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIE 452
Query: 243 DLKSLGIKSFILAGDSHAAA------------LYAQDQL----------DHAFDMV---- 276
+ LG++ ++ GD A A +Y D L +MV
Sbjct: 453 RARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEMVEDAD 512
Query: 277 -YAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMES-GH 333
+AE+ P+HK E+VE+L+K G M GDG+NDAPAL D+GI+ ++G+ A S
Sbjct: 513 GFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIA--VAGATDAARSAAD 570
Query: 334 VILMSNDIRKIPKAIKLARK 353
++L + I AI +RK
Sbjct: 571 IVLTEPGLSVIVDAILESRK 590
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 4e-10
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 275 MVYAELLPQHKEELVELLKKDGAT-AMVGDGINDAPALAAVDIGISMGISGSALAMESGH 333
V+A+L P K +++ L+ +G T +GDGINDAPAL D+GIS+ SG+ +A ES
Sbjct: 616 TVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESAD 674
Query: 334 VILMSNDI 341
+IL+ +
Sbjct: 675 IILLEKSL 682
|
Length = 903 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 61.0 bits (149), Expect = 7e-10
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 33/159 (20%)
Query: 219 LGATP---------VGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSH--AAALYAQD 267
G TP +G L D + G E +L+ +GIK+ ++ GD+ AAA+ A+
Sbjct: 423 KGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482
Query: 268 QLDHAFDMVYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPALAAVDIGISMGISGSA 326
+D D + AE P+ K L+ + +G AM GDG NDAPALA D+G++M SG+
Sbjct: 483 GVD---DFL-AEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQ 537
Query: 327 LAMESGHVI-LMSNDIRKIPKAIKLARKASTKLIQNVTL 364
A E+G+++ L SN P TKLI+ V +
Sbjct: 538 AAKEAGNMVDLDSN-----P----------TKLIEVVEI 561
|
Length = 679 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 4e-08
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 250 KSFILAGDSHAAAL-YAQDQLDH--AFDMVYAELLPQHKEELVELLKK-DGATAMVGDGI 305
++G + A ++ + L + V+A + P KE LVELL+K D M GDG
Sbjct: 752 YHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGA 811
Query: 306 NDAPALAAVDIGISM 320
ND AL D+GIS+
Sbjct: 812 NDCGALKQADVGISL 826
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 20/105 (19%)
Query: 234 RSGALEAIKDLKSLGIKSFILAG--DSHAAALYAQDQLDHAF------------DMVYAE 279
GA E + LK+ G K I++G + + +D+ V
Sbjct: 79 TPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGP 138
Query: 280 LLPQ--HKEELVELLKKDGA----TAMVGDGINDAPALAAVDIGI 318
+ + L EL + G T GD ND P L A + I
Sbjct: 139 ICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPI 183
|
Length = 212 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 6e-06
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 239 EAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGA- 297
E I++L + + +I +GD + + + + + V+A P+ K +++ LKK
Sbjct: 37 ETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEK 95
Query: 298 TAMVGDGINDAPALAAVDIGI-SMGISG-SALAMESGHVILMSNDIRKI 344
MVG+G ND AL D+GI ++ G + + V+L +I +I
Sbjct: 96 VVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL--KEIAEI 142
|
Length = 152 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 28/111 (25%)
Query: 235 SGALEAIKDLKSLGIKSFILAG--DSHAAALYAQDQLDHAF-----------------DM 275
GA E +K LK G K +++G D A + + LD AF +
Sbjct: 88 EGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPI 147
Query: 276 VYAELLPQHKEE-LVELLKKDG----ATAMVGDGINDAPALAAVDIGISMG 321
V A +K + L+ LL+K+G T VGDG ND + A +GI+
Sbjct: 148 VDA----SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN 194
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 15/124 (12%)
Query: 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ--LDHAFDMVYA-------ELLPQHKE 286
G E + LKS G K I+ L FD++ + P+
Sbjct: 93 GVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLL 152
Query: 287 ELVELLKKDGATA-MVGDGINDAPALAAVD---IGISMGISGSALAMESG--HVILMSND 340
L+E L D A MVGD +ND A A +G++ G + ++G VI +
Sbjct: 153 LLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAE 212
Query: 341 IRKI 344
+ +
Sbjct: 213 LLAL 216
|
Length = 220 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.001
Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 27/112 (24%)
Query: 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL--DHAFDMVYAE---------LLPQH 284
G EA+K+LK GIK + S L ++L D FD V
Sbjct: 28 GVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFL 87
Query: 285 KEELVELLKKDGA---------------TAMVGDGINDAPAL-AAVDIGISM 320
++ K + MVGD +ND AA +G+++
Sbjct: 88 GGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 473 | |||
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.98 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 99.95 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 99.9 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.7 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.22 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.08 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.02 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.0 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.95 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.94 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.94 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.93 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.91 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.88 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.87 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.86 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.85 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.83 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.81 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.81 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.78 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.76 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.71 | |
| PLN02887 | 580 | hydrolase family protein | 98.68 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.66 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.6 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.59 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.5 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.47 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.46 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.4 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.39 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.39 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.38 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.34 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.34 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.28 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.26 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.25 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.19 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.18 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.1 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.09 | |
| PRK06769 | 173 | hypothetical protein; Validated | 98.08 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.08 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.03 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.96 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.94 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.89 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.85 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.83 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.75 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.74 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.72 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.71 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.64 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.62 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.62 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.61 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.61 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.59 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.56 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.55 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.52 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.49 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.48 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 97.47 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 97.45 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.45 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.43 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.42 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 97.39 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.38 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.35 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 97.34 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.31 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.28 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.26 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.26 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.23 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 97.22 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.22 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 97.21 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.2 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 97.18 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.18 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 97.1 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 97.03 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 97.0 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.97 | |
| PLN02940 | 382 | riboflavin kinase | 96.97 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.93 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 96.9 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.86 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.85 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.8 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.79 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.72 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.66 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.59 | |
| PLN02811 | 220 | hydrolase | 96.56 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.51 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 96.51 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 96.47 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.47 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.44 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 96.37 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 96.34 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.32 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.32 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 96.28 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 96.19 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.19 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.16 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.07 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.96 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 95.92 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 95.79 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.46 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.45 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.42 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.38 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 95.37 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 95.17 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 94.85 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 94.85 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 94.83 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 94.68 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 94.56 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 94.54 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 94.27 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 94.12 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 93.59 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 93.44 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 93.16 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 92.21 | |
| PLN02151 | 354 | trehalose-phosphatase | 92.12 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 91.87 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.78 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 91.09 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 90.94 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 90.64 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 90.12 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 89.86 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 89.58 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 87.62 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 87.52 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 86.85 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 85.53 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 85.45 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 83.34 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 81.91 |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-79 Score=658.00 Aligned_cols=382 Identities=36% Similarity=0.537 Sum_probs=346.9
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHH--HHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAV--LIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~--a~~~a~~~la 79 (473)
++++.|++|.+++++++.|+.+ +++.+..|... ....+..|+++|||++++|+ ++..|+.+++
T Consensus 323 Dr~a~~fvp~vl~ia~l~f~~w--~~~~~~~~~~a-------------~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA 387 (713)
T COG2217 323 DRVASYFVPVVLVIAALTFALW--PLFGGGDWETA-------------LYRALAVLVIACPCALGLATPTAILVGIGRAA 387 (713)
T ss_pred HHHHHccHHHHHHHHHHHHHHH--HHhcCCcHHHH-------------HHHHHhheeeeCccHHHhHHHHHHHHHHHHHH
Confidence 4788999998888887766632 11221122111 11234567899999999986 8999999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
|+|||+|++.++|+++++|+++||||||||+|+|+|.++...++ ++++++.+++++|..|+||+++||+++++.++.
T Consensus 388 ~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~e~~~L~laAalE~~S~HPiA~AIv~~a~~~~~- 464 (713)
T COG2217 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--DEDELLALAAALEQHSEHPLAKAIVKAAAERGL- 464 (713)
T ss_pred hCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--CHHHHHHHHHHHHhcCCChHHHHHHHHHHhcCC-
Confidence 99999999999999999999999999999999999999998855 889999999999999999999999999988872
Q ss_pred CCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcc---hhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCc
Q 038599 160 PVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKD---SIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSG 236 (473)
Q Consensus 160 ~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~---~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~ 236 (473)
..+.+|++++|+|+++.++|+.+.+|+++++.+.+.+.. +..+.+.++|.++++++.|++++|+|.++|++||+
T Consensus 465 ---~~~~~~~~i~G~Gv~~~v~g~~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~ 541 (713)
T COG2217 465 ---PDVEDFEEIPGRGVEAEVDGERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPD 541 (713)
T ss_pred ---CCccceeeeccCcEEEEECCEEEEEcCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChh
Confidence 345569999999999999999999999999988775543 34577788999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCC
Q 038599 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Ad 315 (473)
++++|++||++|++++|+||||..+|+++|+++||+ +++++++||||.++|+.||++| +|+|||||+||+|||++||
T Consensus 542 a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId--~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~Ad 619 (713)
T COG2217 542 AKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID--EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAAD 619 (713)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH--hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcC
Confidence 999999999999999999999999999999999998 9999999999999999999998 9999999999999999999
Q ss_pred eeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 038599 316 IGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCL 395 (473)
Q Consensus 316 vgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~~~~~~a~l~~~~s~l 395 (473)
|||+|| +|+|+++++||++++++|++.++++++++|+++++|+||+.|++.||+++++++++|+.+||++.+.|.+|++
T Consensus 620 VGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g~l~p~~A~~am~~SSv 698 (713)
T COG2217 620 VGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLLTPWIAALAMSGSSV 698 (713)
T ss_pred eeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHcccHH
Confidence 999999 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhhhcc
Q 038599 396 VVILNSMLLLKN 407 (473)
Q Consensus 396 ~v~~ns~~l~~~ 407 (473)
+|++||+|+++.
T Consensus 699 ~VvlNaLRL~~~ 710 (713)
T COG2217 699 LVVLNALRLLRS 710 (713)
T ss_pred HHHHHHHHhhcc
Confidence 999999999885
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-75 Score=618.31 Aligned_cols=433 Identities=35% Similarity=0.528 Sum_probs=371.3
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhc----chhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHH--HHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIY----HPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAV--LIFCAF 75 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~----~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~--a~~~a~ 75 (473)
++++.+++|.++++.+..++.|..... .+..|.. +.......++..++++|||.|.+|+ |+++|+
T Consensus 490 Dkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~---------~~~~a~~~aisVlviACPCaLgLATPtAvmvat 560 (951)
T KOG0207|consen 490 DKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFD---------AFSHAFQLAISVLVIACPCALGLATPTAVMVAT 560 (951)
T ss_pred HHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhH---------HHHHHHHhhheEEEEECchhhhcCCceEEEEEe
Confidence 578899999999988876665432211 1111210 0111123455678899999999984 888999
Q ss_pred HHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHH
Q 038599 76 SKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARS 155 (473)
Q Consensus 76 ~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~ 155 (473)
...+++|+|+|+++.+|.+.++++|+||||||||+|++.|.++....+..+.++++.++++.|..++||+++||++|+++
T Consensus 561 gvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~Es~SeHPig~AIv~yak~ 640 (951)
T KOG0207|consen 561 GVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALVAAMESGSEHPIGKAIVDYAKE 640 (951)
T ss_pred chhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHHHHHhcCCcCchHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987778899999999999999999999999999999
Q ss_pred cCCCCCCCCccccccccCCc--eeEEecCeEEEEccccccCCCCCCcchh----HHHHhcCCceeeEeeeCCeEEEEEEe
Q 038599 156 LAIEPVPENVEDFQNFPGEG--IFGKIHGNVIYIGNRRIGPRTGCSKDSI----AEAKCTGGKTRGYVYLGATPVGTFSL 229 (473)
Q Consensus 156 ~~~~~~~~~v~~~~~~~g~g--v~~~v~g~~~~iG~~~~~~~~~~~~~~~----~~~~~~~G~~vi~va~d~~~lG~i~l 229 (473)
....+.+..+.+|+.+||+| +...++++++.+||.+++.+++...++. .++....|+++.|++.|++++|++.+
T Consensus 641 ~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~i~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l 720 (951)
T KOG0207|consen 641 KLVEPNPEGVLSFEYFPGEGIYVTVTVDGNEVLIGNKEWMSRNGCSIPDDILDALTESERKGQTVVYVAVNGQLVGVFAL 720 (951)
T ss_pred cccccCccccceeecccCCCcccceEEeeeEEeechHHHHHhcCCCCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEe
Confidence 88666677888999999999 6678899999999999999998887654 34556789999999999999999999
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDA 308 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~ 308 (473)
+|++|||+..+|+.||++|++++|+||||..+|.++|+++||+ +||+++.|+||.++|+.||+++ +|+|||||+||+
T Consensus 721 ~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDa 798 (951)
T KOG0207|consen 721 EDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDA 798 (951)
T ss_pred ccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc--eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCcc
Confidence 9999999999999999999999999999999999999999988 9999999999999999999997 999999999999
Q ss_pred HHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------HH
Q 038599 309 PALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGY------PL 382 (473)
Q Consensus 309 ~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~------~~ 382 (473)
|||++|||||++| .|++.|.++||+|++.+|+.+++..++++|++.+++|+|+.|++.||++++++++++| .+
T Consensus 799 PALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~ 877 (951)
T KOG0207|consen 799 PALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLP 877 (951)
T ss_pred HHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccC
Confidence 9999999999999 8899999999999999999999999999999999999999999999999999987653 38
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccccccCCccccc--cccc-----cccccccccchh--hcccccCCCccccc
Q 038599 383 VWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSK--YGTF-----SLSCKKDEDKEA--LNVKNCRSRCCEAT 449 (473)
Q Consensus 383 ~~~a~l~~~~s~l~v~~ns~~l~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~ 449 (473)
||.|.+.|.++++.|++||+++++++..... .+++ ..++ .+.+ .+.+.+. ....+|..+||.++
T Consensus 878 Pw~A~lama~SSvsVv~sSllLk~~k~p~~~--~~~~~e~~~~~~~~~~~~~-~~~~~gl~~~~~~~~k~~~~~~~ 950 (951)
T KOG0207|consen 878 PWMASLAMAASSVSVVLSSLLLKRYKKPTIN--KLYRYEAETSSSIGQKSES-VDLHRGLDDKGRKSCKSGCCSNK 950 (951)
T ss_pred chHHHHHHHhhhHHHhhhHHHHhhccccccc--cceeccccccccccccccc-ceEEeccccccccCcccccccCC
Confidence 9999999999999999999999888754322 2222 2211 1111 2333333 36777888888764
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-66 Score=572.35 Aligned_cols=385 Identities=32% Similarity=0.463 Sum_probs=339.6
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHH--HHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAV--LIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~--a~~~a~~~la 79 (473)
+++++|++|+++++++++++.+..+ + ...|... ....+..++++|||.+.+++ ++..++.+++
T Consensus 354 d~~a~~~~~~v~~~a~~~~~~~~~~-~-~~~~~~~-------------i~~a~svlviacPcaL~latP~a~~~~l~~aa 418 (741)
T PRK11033 354 DRFSRIYTPAIMLVALLVILVPPLL-F-AAPWQEW-------------IYRGLTLLLIGCPCALVISTPAAITSGLAAAA 418 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-c-cCCHHHH-------------HHHHHHHHHHhchhhhhhhhHHHHHHHHHHHH
Confidence 5678999999998888876643111 1 1111100 01123446788899988865 8888999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
|+||++|+++++|+++++|++|||||||||+|+|+|.+++.+ ++.++++++.+++++|..++||+++||++++++++..
T Consensus 419 r~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~-~~~~~~~~l~~aa~~e~~s~hPia~Ai~~~a~~~~~~ 497 (741)
T PRK11033 419 RRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPA-TGISESELLALAAAVEQGSTHPLAQAIVREAQVRGLA 497 (741)
T ss_pred HCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEec-CCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999876 4567888999999999999999999999999888765
Q ss_pred CCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcchhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHH
Q 038599 160 PVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALE 239 (473)
Q Consensus 160 ~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~ 239 (473)
. ....+++.++|.|+++.++|+.+.+|+++++.+.........+++.++|++++++++|++++|++.|+|++|||+++
T Consensus 498 ~--~~~~~~~~~~g~Gv~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~ 575 (741)
T PRK11033 498 I--PEAESQRALAGSGIEGQVNGERVLICAPGKLPPLADAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQ 575 (741)
T ss_pred C--CCCcceEEEeeEEEEEEECCEEEEEecchhhhhccHHHHHHHHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHH
Confidence 3 34678888999999999999999999999986532222333567788999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCcccHHHHHHCCeeEE
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~ND~~al~~AdvgIa 319 (473)
+|++||++|++++|+|||+..++.++++++||. ++++++|+||.++|+.||+.+.|+|+|||+||+|||++|||||+
T Consensus 576 ~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---~~~~~~p~~K~~~v~~l~~~~~v~mvGDgiNDapAl~~A~vgia 652 (741)
T PRK11033 576 AISELKALGIKGVMLTGDNPRAAAAIAGELGID---FRAGLLPEDKVKAVTELNQHAPLAMVGDGINDAPAMKAASIGIA 652 (741)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---eecCCCHHHHHHHHHHHhcCCCEEEEECCHHhHHHHHhCCeeEE
Confidence 999999999999999999999999999999995 78899999999999999977799999999999999999999999
Q ss_pred eCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 038599 320 MGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVIL 399 (473)
Q Consensus 320 ~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~~~~~~a~l~~~~s~l~v~~ 399 (473)
|| ++++.++++||++++++++..++++++++|+++++|++|+.|++.||+++++++++|+.+||+++++|.+++++|++
T Consensus 653 ~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~~~~~a~~~~~~ss~~v~~ 731 (741)
T PRK11033 653 MG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGITGLWLAVLADSGATALVTA 731 (741)
T ss_pred ec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHcChHHHHHH
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhhhccc
Q 038599 400 NSMLLLKNN 408 (473)
Q Consensus 400 ns~~l~~~~ 408 (473)
||+|+++++
T Consensus 732 Nslrl~~~~ 740 (741)
T PRK11033 732 NALRLLRKR 740 (741)
T ss_pred HHHhhcccC
Confidence 999998654
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-62 Score=538.15 Aligned_cols=385 Identities=20% Similarity=0.249 Sum_probs=304.2
Q ss_pred CccCchhHHHHHHHHHHHHHHHHh-hhcchh-HHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLG-YIYHPL-QSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~-~~~~~~-~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~la 79 (473)
+++++|+.++++++++++++.... +..... ...+.++++++..|+.+|...++ +++.++++|+
T Consensus 204 ~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~---------------~la~g~~r~a 268 (755)
T TIGR01647 204 SKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSV---------------TMAVGAAELA 268 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHH---------------HHHHHHHHHH
Confidence 356677777766665554443221 111111 22456667777888888877666 8999999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhh-hccCCChHHHHHHHHHHHcCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSI-ESKSSHPMAAALVDYARSLAI 158 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~-e~~s~hpi~~Ai~~~a~~~~~ 158 (473)
|+|+++|+++++|++|++|++|||||||||+|+|+|.+++..+++.+.++++.+++.. +..++||+++|+++++++.+.
T Consensus 269 k~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~ 348 (755)
T TIGR01647 269 KKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKE 348 (755)
T ss_pred hCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHH
Confidence 9999999999999999999999999999999999999998765446677788777654 477899999999998875431
Q ss_pred CCCCCCccccccc--cCCceeEEec----CeE--EEEccccccCCCCCCc-------chhHHHHhcCCceeeEeee----
Q 038599 159 EPVPENVEDFQNF--PGEGIFGKIH----GNV--IYIGNRRIGPRTGCSK-------DSIAEAKCTGGKTRGYVYL---- 219 (473)
Q Consensus 159 ~~~~~~v~~~~~~--~g~gv~~~v~----g~~--~~iG~~~~~~~~~~~~-------~~~~~~~~~~G~~vi~va~---- 219 (473)
........+..++ .++++.+.++ |+. +.+|+++.+.+.+... .+..+++.++|+|++++++
T Consensus 349 ~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~~e 428 (755)
T TIGR01647 349 ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTDEE 428 (755)
T ss_pred HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEcCC
Confidence 1101111122222 4667776662 544 4579999886544221 1234677889999999997
Q ss_pred -CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------------
Q 038599 220 -GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------------ 274 (473)
Q Consensus 220 -d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------------ 274 (473)
+++|+|++.|+||+|||++++|++||++|++++|+|||+..+|.++|+++||...
T Consensus 429 ~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~ 508 (755)
T TIGR01647 429 GRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEM 508 (755)
T ss_pred CCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHH
Confidence 2389999999999999999999999999999999999999999999999999741
Q ss_pred ----ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 275 ----MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 275 ----~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.+|++++|+||.++|+.||++| .|+|+|||+||+|||++|||||+|| +|+++++++||++++++||+.++++++
T Consensus 509 ~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 509 VEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred HHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHH
Confidence 2899999999999999999999 8999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----Hhh-----HHHHHHHHHHHHHHHHHHHHhHh
Q 038599 350 LARKASTKLIQNVTLSVTVKGAVLVLAV-----AGY-----PLVWVAVLTDVGTCLVVILNSML 403 (473)
Q Consensus 350 ~~r~~~~~i~~n~~~~~~~n~~~~~la~-----~g~-----~~~~~a~l~~~~s~l~v~~ns~~ 403 (473)
+||++++++++|+.|.++.|+..+++.+ .++ +.+|+++++|. +++.+.++...
T Consensus 588 ~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il~~~l~~d~-~~~~l~~~~~~ 650 (755)
T TIGR01647 588 ESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDG-TIMTIAYDNVK 650 (755)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHHHHHHHHhH-hHhhccCCCCC
Confidence 9999999999999999999985443222 221 24688888885 46666666544
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-61 Score=539.78 Aligned_cols=385 Identities=26% Similarity=0.376 Sum_probs=334.3
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHH--HHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAV--LIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~--a~~~a~~~la 79 (473)
+++++|+.|++++++++.++.+... .....|.. .....+..++++|||.+.+++ ++..++.+++
T Consensus 434 d~~a~~~v~~v~~~a~~~~~~~~~~-~~~~~~~~-------------~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a 499 (834)
T PRK10671 434 DKISAVFVPVVVVIALVSAAIWYFF-GPAPQIVY-------------TLVIATTVLIIACPCALGLATPMSIISGVGRAA 499 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCchHHHH-------------HHHHHHHHHHHhcccchhhhHHHHHHHHHHHHH
Confidence 4567888888888777655433111 00001110 111233456777888877764 8889999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
|+||++|+++++|+++++|++|||||||||+|+|+|.++... ++.+.++++.+++++|..++||+++||+++++...
T Consensus 500 ~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~-~~~~~~~~l~~a~~~e~~s~hp~a~Ai~~~~~~~~-- 576 (834)
T PRK10671 500 EFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTF-NGVDEAQALRLAAALEQGSSHPLARAILDKAGDMT-- 576 (834)
T ss_pred HCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEcc-CCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHhhCC--
Confidence 999999999999999999999999999999999999998876 34677889999999999999999999999886432
Q ss_pred CCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcc---hhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCc
Q 038599 160 PVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKD---SIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSG 236 (473)
Q Consensus 160 ~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~---~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~ 236 (473)
...+.+|++++|.|+++.++|+.+.+|+++++.+.+.... +..+++.++|.+++++++|+.++|++.+.|++||+
T Consensus 577 --~~~~~~~~~~~g~Gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~ 654 (834)
T PRK10671 577 --LPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAIRDPLRSD 654 (834)
T ss_pred --CCCcccceEecceEEEEEECCEEEEEeCHHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEccCcchhh
Confidence 2356789999999999999999999999999876655422 22456678999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCC
Q 038599 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Ad 315 (473)
++++|++|++.|+++.|+|||+..++..+++++||+ .++++..|++|.++++.++.++ .|+|+|||.||++|+++||
T Consensus 655 a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 732 (834)
T PRK10671 655 SVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID--EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQAD 732 (834)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC--EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999999999999999999998 8999999999999999999998 8999999999999999999
Q ss_pred eeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------Hh-hHHHHHHHH
Q 038599 316 IGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAV------AG-YPLVWVAVL 388 (473)
Q Consensus 316 vgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~------~g-~~~~~~a~l 388 (473)
+||+|| ++++.++++||++++++++..|+++++++|+++++|++|+.|++.||++++++|+ +| +.+||++.+
T Consensus 733 vgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~ 811 (834)
T PRK10671 733 VGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGA 811 (834)
T ss_pred eeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHH
Confidence 999999 8999999999999999999999999999999999999999999999999999997 45 568999999
Q ss_pred HHHHHHHHHHHHhHhhhccc
Q 038599 389 TDVGTCLVVILNSMLLLKNN 408 (473)
Q Consensus 389 ~~~~s~l~v~~ns~~l~~~~ 408 (473)
.|.+|+++|++||+|+.+++
T Consensus 812 ~m~~ss~~vv~nslrl~~~~ 831 (834)
T PRK10671 812 AMALSSITVVSNANRLLRFK 831 (834)
T ss_pred HhcccceeehhhhHHhcCCC
Confidence 99999999999999996543
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-61 Score=515.74 Aligned_cols=380 Identities=37% Similarity=0.535 Sum_probs=330.8
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
+++++|+.+++++++++.++.++.+... ..+...+++++...|..++...++ ++..++.+|+|+
T Consensus 167 ~~~a~~~~~~~l~~a~~~~~~~~~~~~~-~~~~~~~~vlv~~~P~al~l~~~~---------------~~~~~~~~~~~~ 230 (556)
T TIGR01525 167 DRIASYYVPAVLAIALLTFVVWLALGAL-GALYRALAVLVVACPCALGLATPV---------------AILVAIGVAARR 230 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc-hHHHHHHHHHhhccccchhehhHH---------------HHHHHHHHHHHC
Confidence 3567788888887777766654322111 222344455555566666655554 899999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCC--HHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVS--LGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~--~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
||++|+++++|+++++|++|||||||||+|+|+|.++...++ .+ .++++.+++++|..+.||+++||++++++.+.+
T Consensus 231 gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~-~~~~~~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 231 GILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDD-ASISEEELLALAAALEQSSSHPLARAIVRYAKKRGLE 309 (556)
T ss_pred CceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCC-CCccHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999987633 33 678899999999999999999999999987765
Q ss_pred CCCCCcc-ccccccCCceeEEecC-eEEEEccccccCCCCCCcc---hhHHHHhcCCceeeEeeeCCeEEEEEEecCccC
Q 038599 160 PVPENVE-DFQNFPGEGIFGKIHG-NVIYIGNRRIGPRTGCSKD---SIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCR 234 (473)
Q Consensus 160 ~~~~~v~-~~~~~~g~gv~~~v~g-~~~~iG~~~~~~~~~~~~~---~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr 234 (473)
... . +++++++.|+++.++| .++.+|+++++........ ...+++.++|++++++++|++++|.+.++|++|
T Consensus 310 ~~~---~~~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~ 386 (556)
T TIGR01525 310 LPK---QEDVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLR 386 (556)
T ss_pred ccc---ccCeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhhHHHHHHHhhCCcEEEEEEECCEEEEEEEecccch
Confidence 421 3 6777899999999999 7999999998732222211 234566789999999999999999999999999
Q ss_pred CchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHH
Q 038599 235 SGALEAIKDLKSLG-IKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALA 312 (473)
Q Consensus 235 ~~a~~~I~~L~~~g-i~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~ 312 (473)
|+++++|++|+++| +++.|+|||+..++.++++++|+. .+|++..|++|.++++.+++.+ .|+|+|||.||++|++
T Consensus 387 ~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~ 464 (556)
T TIGR01525 387 PEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALA 464 (556)
T ss_pred HhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHh
Confidence 99999999999999 999999999999999999999998 8999999999999999999888 8999999999999999
Q ss_pred HCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHH
Q 038599 313 AVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGYPLVW-VAVLTDV 391 (473)
Q Consensus 313 ~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~~~~~-~a~l~~~ 391 (473)
+||+|+++| .+++.+++.||+++.++++..++++++++|++++++++|+.|+++||+++++++++|+.+|| .+.+.|.
T Consensus 465 ~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~~p~~~aa~~m~ 543 (556)
T TIGR01525 465 AADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLWLLAVLLHE 543 (556)
T ss_pred hCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHh
Confidence 999999999 78999999999999999999999999999999999999999999999999999999999997 9999999
Q ss_pred HHHHHHHHHhHhh
Q 038599 392 GTCLVVILNSMLL 404 (473)
Q Consensus 392 ~s~l~v~~ns~~l 404 (473)
++++++++||+|+
T Consensus 544 ~ss~~v~lns~r~ 556 (556)
T TIGR01525 544 GSTVLVVLNSLRL 556 (556)
T ss_pred chHHHHHHHhhcC
Confidence 9999999999985
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-61 Score=514.94 Aligned_cols=369 Identities=39% Similarity=0.541 Sum_probs=322.9
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
+++++|+.+++++++++.++.+..+...+......+++++...|..++...++ ++..++.+|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~svlv~~~P~aL~la~~~---------------~~~~~~~~~~k~ 230 (536)
T TIGR01512 166 DRFARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPA---------------AYLSAISAAARH 230 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhcCccccccchHH---------------HHHHHHHHHHHC
Confidence 35677888888777766554332110011112233444445555555544443 888999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCCC
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPV 161 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~~ 161 (473)
||++|+++++|+++++|++|||||||||+|+|+|.+++. .+++.+++++|..+.||+++||++++++.+
T Consensus 231 gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~-------~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP-------AEVLRLAAAAEQASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred CeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH-------HHHHHHHHHHhccCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999999999865 268899999999999999999999998764
Q ss_pred CCCccccccccCCceeEEecCeEEEEccccccCCCCCCcchhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHH
Q 038599 162 PENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAI 241 (473)
Q Consensus 162 ~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I 241 (473)
.+.++++++++|+++.++|+.+.+|+++++.+.+.. .+.++|.+++++++|+.+.|.+.++|++||+++++|
T Consensus 300 --~~~~~~~~~g~gi~~~~~g~~~~ig~~~~~~~~~~~------~~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i 371 (536)
T TIGR01512 300 --NVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVGA------RPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAI 371 (536)
T ss_pred --CCcceEEecCCeEEEEECCeEEEEcCHHHHhhcCCc------chhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHH
Confidence 355677889999999999999999999888665543 455678899999999999999999999999999999
Q ss_pred HHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEE
Q 038599 242 KDLKSLGI-KSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 242 ~~L~~~gi-~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa 319 (473)
++|+++|+ ++.|+|||+..++..+++++|++ .+|++..|++|.++++.++.++ .|+|+|||.||++|+++||+|++
T Consensus 372 ~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia 449 (536)
T TIGR01512 372 AELKALGIEKVVMLTGDRRAVAERVARELGID--EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIA 449 (536)
T ss_pred HHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh--hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEE
Confidence 99999999 99999999999999999999998 8999999999999999999998 89999999999999999999999
Q ss_pred eCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 038599 320 MGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVIL 399 (473)
Q Consensus 320 ~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~~~~~~a~l~~~~s~l~v~~ 399 (473)
+|..+++.+++.||+++.++++..++++++++|++++++++|+.|++.||+++++++++|+.+||.+.+.|.++++++++
T Consensus 450 ~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~p~~aa~~m~~ss~~v~~ 529 (536)
T TIGR01512 450 MGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLPLWLAVLGHEGSTVLVIL 529 (536)
T ss_pred eCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHcChHHHHHH
Confidence 98567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhhhc
Q 038599 400 NSMLLLK 406 (473)
Q Consensus 400 ns~~l~~ 406 (473)
||+|+.+
T Consensus 530 ns~r~~~ 536 (536)
T TIGR01512 530 NALRLLR 536 (536)
T ss_pred HHHhhcC
Confidence 9999853
|
. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-60 Score=510.59 Aligned_cols=317 Identities=23% Similarity=0.317 Sum_probs=268.8
Q ss_pred HHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceE
Q 038599 35 AVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFT 114 (473)
Q Consensus 35 ~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~ 114 (473)
+.+++.+...|+.+++..+. +...|+.||+|+|+++|+++++|++|++|++|||||||||+|++.
T Consensus 251 ~~val~V~~IP~aL~~~~~~---------------~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~ 315 (673)
T PRK14010 251 MLIALAVCLIPTTIGGLLSA---------------IGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRM 315 (673)
T ss_pred HHHHHHHHhhhhhHHHHHHH---------------HHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeE
Confidence 33344445556666655544 778999999999999999999999999999999999999999998
Q ss_pred EEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCCCCCCccccccccC--CceeEEecCeEEEEccccc
Q 038599 115 VTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPG--EGIFGKIHGNVIYIGNRRI 192 (473)
Q Consensus 115 V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~~~~~v~~~~~~~g--~gv~~~v~g~~~~iG~~~~ 192 (473)
+.++.+. ++.+.++++.++...+..+.||+++||++++++.+++.. ....++..+.. ++....++++.+.+|++++
T Consensus 316 ~~~~~~~-~~~~~~~ll~~a~~~~~~s~~P~~~AIv~~a~~~~~~~~-~~~~~~~pF~~~~k~~gv~~~g~~i~kGa~~~ 393 (673)
T PRK14010 316 ADAFIPV-KSSSFERLVKAAYESSIADDTPEGRSIVKLAYKQHIDLP-QEVGEYIPFTAETRMSGVKFTTREVYKGAPNS 393 (673)
T ss_pred EEEEEeC-CCccHHHHHHHHHHhcCCCCChHHHHHHHHHHHcCCCch-hhhcceeccccccceeEEEECCEEEEECCHHH
Confidence 8887765 345667788888888888999999999999988765421 11122222221 1222246788899999988
Q ss_pred cCC----CCCCc----chhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q 038599 193 GPR----TGCSK----DSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALY 264 (473)
Q Consensus 193 ~~~----~~~~~----~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~ 264 (473)
+.+ .+... ....+++.++|+|+++++.|++++|++.++|++|||++++|++||++|++++|+||||+.+|.+
T Consensus 394 il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~a 473 (673)
T PRK14010 394 MVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAAT 473 (673)
T ss_pred HHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 732 12111 2234667889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCccc
Q 038599 265 AQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRK 343 (473)
Q Consensus 265 ~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~ 343 (473)
+|+++||+ .++++++||||.++|+.||++| .|+|+|||+||+|||++|||||||| +|++.++++||+|++++||+.
T Consensus 474 IA~elGI~--~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~ 550 (673)
T PRK14010 474 IAKEAGVD--RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTK 550 (673)
T ss_pred HHHHcCCc--eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHH
Confidence 99999998 8999999999999999999999 8999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 344 IPKAIKLARKASTKLIQNVTLSVTVKGA 371 (473)
Q Consensus 344 l~~~i~~~r~~~~~i~~n~~~~~~~n~~ 371 (473)
+++++++||+++.|+++.+.|++..|+.
T Consensus 551 Iv~av~~gR~i~~n~~~~~~f~~~~~~~ 578 (673)
T PRK14010 551 LMEVVLIGKQLLMTRGSLTTFSIANDIA 578 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeeccHH
Confidence 9999999999999999999999998884
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-61 Score=537.27 Aligned_cols=349 Identities=22% Similarity=0.282 Sum_probs=283.0
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
++.++++++..|+.||...++ +++.|+.+|+|+|+++|+++++|++|++|++|||||||||+|+|
T Consensus 321 ~~aisl~V~~~Pe~Lp~~vt~---------------~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m 385 (903)
T PRK15122 321 LFALAVAVGLTPEMLPMIVSS---------------NLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRI 385 (903)
T ss_pred HHHHHHHHHHccchHHHHHHH---------------HHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeE
Confidence 456677778888888877666 89999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCCHHHHHHHHHh---hhccCCChHHHHHHHHHHHcCCCCCCCCccccccccCCceeEE----e---cCe
Q 038599 114 TVTDFQSICDDVSLGTLLYWVSS---IESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGK----I---HGN 183 (473)
Q Consensus 114 ~V~~i~~~~~~~~~~~ll~~~a~---~e~~s~hpi~~Ai~~~a~~~~~~~~~~~v~~~~~~~g~gv~~~----v---~g~ 183 (473)
+|.+++..+ +.+.++++.+++. .+..++||++.|++.++...+..........+.++|+.+.+.. + +|+
T Consensus 386 ~V~~~~~~~-~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~ 464 (903)
T PRK15122 386 ILEHHLDVS-GRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQ 464 (903)
T ss_pred EEEEEEcCC-CCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCc
Confidence 999987653 3344566665542 2345789999999999987654321122334445555543322 1 454
Q ss_pred E--EEEccccccCCCCC---------Ccc--------hhHHHHhcCCceeeEeee------------------CCeEEEE
Q 038599 184 V--IYIGNRRIGPRTGC---------SKD--------SIAEAKCTGGKTRGYVYL------------------GATPVGT 226 (473)
Q Consensus 184 ~--~~iG~~~~~~~~~~---------~~~--------~~~~~~~~~G~~vi~va~------------------d~~~lG~ 226 (473)
. +.+|+++.+.+.+. +.+ ...+++.++|+|++++++ |++|+|+
T Consensus 465 ~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGl 544 (903)
T PRK15122 465 HLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGF 544 (903)
T ss_pred EEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEE
Confidence 4 44499875432211 111 124567889999999884 4589999
Q ss_pred EEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------------ceehccChh
Q 038599 227 FSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-----------------------MVYAELLPQ 283 (473)
Q Consensus 227 i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-----------------------~v~a~~~P~ 283 (473)
++|+||+|||++++|++||++|++++|+|||+..+|.++|+++||..+ .+|+|++|+
T Consensus 545 i~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe 624 (903)
T PRK15122 545 LTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPL 624 (903)
T ss_pred EeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHH
Confidence 999999999999999999999999999999999999999999999621 699999999
Q ss_pred hHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHH
Q 038599 284 HKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNV 362 (473)
Q Consensus 284 ~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~ 362 (473)
||.++|+.||++| .|+|+|||+||+|||++|||||||| +|+|+++++||+|++++||+.+++++++||++++|+++++
T Consensus 625 ~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i 703 (903)
T PRK15122 625 QKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYL 703 (903)
T ss_pred HHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 8999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-----Hh------hHHHHHHHHHHHHHHHHHHHH
Q 038599 363 TLSVTVKGAVLVLAV-----AG------YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 363 ~~~~~~n~~~~~la~-----~g------~~~~~~a~l~~~~s~l~v~~n 400 (473)
.|.++.|+..++..+ .+ .+.+|+++++|. +++.+...
T Consensus 704 ~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d 751 (903)
T PRK15122 704 NMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWD 751 (903)
T ss_pred HHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCC
Confidence 999999874432221 12 246899999995 67766663
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-60 Score=530.11 Aligned_cols=381 Identities=18% Similarity=0.200 Sum_probs=296.0
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcc-hhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYH-PLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAAT 80 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak 80 (473)
+++++|+.++++++++++++........ .-.+++.++++++..|+.||...++ +++.|+.+|+|
T Consensus 255 ~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~---------------~la~g~~~mak 319 (867)
T TIGR01524 255 KSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSS---------------NLAKGAINMSK 319 (867)
T ss_pred HHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHH---------------HHHHHHHHHHh
Confidence 3556677666666555443322111011 1123456667778888888877766 99999999999
Q ss_pred CCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHH---hhhccCCChHHHHHHHHHHHcC
Q 038599 81 TGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVS---SIESKSSHPMAAALVDYARSLA 157 (473)
Q Consensus 81 ~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a---~~e~~s~hpi~~Ai~~~a~~~~ 157 (473)
+|+++|+++++|++|++|++|||||||||+|+|+|.+++..+ +.+.++++.+++ ..+..++||++.|+++++....
T Consensus 320 ~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~-~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~ 398 (867)
T TIGR01524 320 KKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSS-GETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESA 398 (867)
T ss_pred CCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCC-CCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999987542 334566666554 2334467999999999987542
Q ss_pred CCCCCCCcccccccc----CCceeEEecC-----eEEEEccccccCCCCCC-----------------cchhHHHHhcCC
Q 038599 158 IEPVPENVEDFQNFP----GEGIFGKIHG-----NVIYIGNRRIGPRTGCS-----------------KDSIAEAKCTGG 211 (473)
Q Consensus 158 ~~~~~~~v~~~~~~~----g~gv~~~v~g-----~~~~iG~~~~~~~~~~~-----------------~~~~~~~~~~~G 211 (473)
..........+.++| ++++.+.+++ ..+.+|+++.+.+.+.. ..+..++++++|
T Consensus 399 ~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G 478 (867)
T TIGR01524 399 ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQG 478 (867)
T ss_pred hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcC
Confidence 111001112222222 4566665543 24778998776432211 011245678899
Q ss_pred ceeeEeee----------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-
Q 038599 212 KTRGYVYL----------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD- 274 (473)
Q Consensus 212 ~~vi~va~----------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~- 274 (473)
+|++++++ |++|+|+++|+|++|||++++|++||++|++++|+|||+..+|.++|+++||..+
T Consensus 479 ~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~ 558 (867)
T TIGR01524 479 IRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND 558 (867)
T ss_pred CEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC
Confidence 99999886 2489999999999999999999999999999999999999999999999999731
Q ss_pred ----------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccccc
Q 038599 275 ----------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMES 331 (473)
Q Consensus 275 ----------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ 331 (473)
.+|+|++|+||.++|+.||++| .|+|+|||+||+|||++|||||+|| +|+++++++
T Consensus 559 v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~a 637 (867)
T TIGR01524 559 FLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEA 637 (867)
T ss_pred eeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHh
Confidence 7999999999999999999999 8999999999999999999999999 999999999
Q ss_pred ccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h------hHHHHHHHHHHHHHHHHHHHH
Q 038599 332 GHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVA-----G------YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 332 ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~-----g------~~~~~~a~l~~~~s~l~v~~n 400 (473)
||+|++++||+.++.++++||++++|+++|+.|.++.|+..+...++ . .+.+|+++++| ++++.+...
T Consensus 638 ADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~ 716 (867)
T TIGR01524 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWD 716 (867)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCC
Confidence 99999999999999999999999999999999999888744332222 1 23689999999 677777664
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-60 Score=530.68 Aligned_cols=380 Identities=19% Similarity=0.238 Sum_probs=293.1
Q ss_pred ccCchhHHHHHHHHHHHHHH-HHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 3 SQKKWPAPSVMASGLLLALS-FLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 3 ~~~~~~~~~~i~~~i~~~~~-~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
++++++.++++++++++++. ++........+++.++++++..|+.||...++ +++.|+.+|+|+
T Consensus 291 ~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~---------------~la~g~~~mak~ 355 (902)
T PRK10517 291 RVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTS---------------TLARGAVKLSKQ 355 (902)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHH---------------HHHHHHHHHHhC
Confidence 45556666555555443332 11110001123466777788889999887776 899999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHh---hhccCCChHHHHHHHHHHHcCC
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSS---IESKSSHPMAAALVDYARSLAI 158 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~---~e~~s~hpi~~Ai~~~a~~~~~ 158 (473)
|+++|+++++|++|++|++|||||||||+|+|+|.++.... +.+.++++.+++. .+...+||++.|++.+++..+.
T Consensus 356 ~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~-~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~ 434 (902)
T PRK10517 356 KVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS-GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESA 434 (902)
T ss_pred CcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC-CCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcch
Confidence 99999999999999999999999999999999999976442 3345666665543 2345689999999999875431
Q ss_pred CCCCCCcccccccc----CCceeEEec---C--eEEEEccccccCCCCCC---------c--------chhHHHHhcCCc
Q 038599 159 EPVPENVEDFQNFP----GEGIFGKIH---G--NVIYIGNRRIGPRTGCS---------K--------DSIAEAKCTGGK 212 (473)
Q Consensus 159 ~~~~~~v~~~~~~~----g~gv~~~v~---g--~~~~iG~~~~~~~~~~~---------~--------~~~~~~~~~~G~ 212 (473)
.+.........++| .+++...++ + ..+.+|+++.+.+.+.. . ....+++.++|+
T Consensus 435 ~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~ 514 (902)
T PRK10517 435 RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGL 514 (902)
T ss_pred hhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCC
Confidence 11111112222222 344554432 2 34678988765432211 1 111356788999
Q ss_pred eeeEeee----------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--
Q 038599 213 TRGYVYL----------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-- 274 (473)
Q Consensus 213 ~vi~va~----------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-- 274 (473)
|++++++ |++|+|+++|+||+||+++++|++||++|++++|+|||+..+|.++|+++||..+
T Consensus 515 rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~v 594 (902)
T PRK10517 515 RVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEV 594 (902)
T ss_pred EEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccCc
Confidence 9999884 5689999999999999999999999999999999999999999999999999632
Q ss_pred ---------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccc
Q 038599 275 ---------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESG 332 (473)
Q Consensus 275 ---------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~a 332 (473)
.+|+|++|+||.++|+.||++| .|+|+|||+||+|||++|||||||| +|+|+++++|
T Consensus 595 ~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaA 673 (902)
T PRK10517 595 LIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAA 673 (902)
T ss_pred eeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhC
Confidence 7999999999999999999999 8999999999999999999999999 9999999999
Q ss_pred cEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h------hHHHHHHHHHHHHHHHHHHHH
Q 038599 333 HVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVA-----G------YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 333 d~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~-----g------~~~~~~a~l~~~~s~l~v~~n 400 (473)
|+|++++||..|++++++||++++|+++++.|.++.|+..++..++ . .+.+|+++++| ++++.+.+.
T Consensus 674 DiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d 751 (902)
T PRK10517 674 DIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFD 751 (902)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCC
Confidence 9999999999999999999999999999999999999844333222 1 23789999999 567766664
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-58 Score=496.07 Aligned_cols=294 Identities=23% Similarity=0.330 Sum_probs=253.2
Q ss_pred HHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHH
Q 038599 70 LIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAAL 149 (473)
Q Consensus 70 a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai 149 (473)
+...|+.||+|+|+++|+++++|++|++|++|||||||||+|+|++.++++. ++.+.++++..++..+..+.||.++||
T Consensus 271 i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~-~~~~~~~ll~~a~~~s~~s~hP~~~AI 349 (679)
T PRK01122 271 IGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPV-PGVTEEELADAAQLSSLADETPEGRSI 349 (679)
T ss_pred HHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeC-CCCCHHHHHHHHHHhcCCCCCchHHHH
Confidence 5668999999999999999999999999999999999999999999999876 446677888888888999999999999
Q ss_pred HHHHHHc-CCCCCCC--CccccccccC-CceeE-EecCeEEEEcccccc----CCCCCCcc----hhHHHHhcCCceeeE
Q 038599 150 VDYARSL-AIEPVPE--NVEDFQNFPG-EGIFG-KIHGNVIYIGNRRIG----PRTGCSKD----SIAEAKCTGGKTRGY 216 (473)
Q Consensus 150 ~~~a~~~-~~~~~~~--~v~~~~~~~g-~gv~~-~v~g~~~~iG~~~~~----~~~~~~~~----~~~~~~~~~G~~vi~ 216 (473)
++++++. +...... ...++..+++ +++++ .++|+.+.+|+++.+ .+.+...+ +..+++.++|.|+++
T Consensus 350 v~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~ 429 (679)
T PRK01122 350 VVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLV 429 (679)
T ss_pred HHHHHhhcCCCchhhccccceeEeecCcCceEEEEECCEEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEE
Confidence 9998762 3322110 1122223332 34555 367899999999654 22232222 224667889999999
Q ss_pred eeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC
Q 038599 217 VYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 217 va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g 296 (473)
+++|++++|++.++|++|||++++|++||++|++++|+||||+.+|.++|+++||+ +++++++||||.++|+.+|++|
T Consensus 430 va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--~v~A~~~PedK~~iV~~lQ~~G 507 (679)
T PRK01122 430 VAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFLAEATPEDKLALIRQEQAEG 507 (679)
T ss_pred EEECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--EEEccCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred -cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVT 367 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~ 367 (473)
.|+|+|||+||+|||++|||||+|| +|++.++++||+|++++|++.+++++++||++.-+--.--.|++.
T Consensus 508 ~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 508 RLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred CeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 8999999999999999999999999 999999999999999999999999999999999665555667765
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-58 Score=491.34 Aligned_cols=345 Identities=35% Similarity=0.514 Sum_probs=304.2
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHH--HHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAV--LIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~--a~~~a~~~la 79 (473)
+++++|+.|.+++++++.++.+.. .... .+..++++|||.+.+++ ++..++.+++
T Consensus 203 d~~a~~~~~~v~~~a~~~~~~~~~------~~~~-----------------~~svlvvacPcaL~la~p~a~~~~~~~aa 259 (562)
T TIGR01511 203 DKVAGYFVPVVIAIALITFVIWLF------ALEF-----------------AVTVLIIACPCALGLATPTVIAVATGLAA 259 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HHHH-----------------HHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence 456778888877777665543210 1111 22334556666665553 8899999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
|+||++|+++++|+++++|++|||||||||+|+|+|.++...+ +.++++++.+++++|..++||+++||++++++.+..
T Consensus 260 ~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~-~~~~~~~l~~aa~~e~~s~HPia~Ai~~~~~~~~~~ 338 (562)
T TIGR01511 260 KNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFG-DRDRTELLALAAALEAGSEHPLAKAIVSYAKEKGIT 338 (562)
T ss_pred HCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCC-CCCHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999998763 456788999999999999999999999999887765
Q ss_pred CCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcchhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHH
Q 038599 160 PVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALE 239 (473)
Q Consensus 160 ~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~ 239 (473)
. ..+.++++++|+|+.+.++|+.+.+|+++++.+.+...+ +..++|.++++++.|++++|++.++|++||++++
T Consensus 339 ~--~~~~~~~~~~g~Gi~~~~~g~~~~iG~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e 412 (562)
T TIGR01511 339 L--VEVSDFKAIPGIGVEGTVEGTKIQLGNEKLLGENAIKID----GKAEQGSTSVLVAVNGELAGVFALEDQLRPEAKE 412 (562)
T ss_pred c--CCCCCeEEECCceEEEEECCEEEEEECHHHHHhCCCCCC----hhhhCCCEEEEEEECCEEEEEEEecccccHHHHH
Confidence 3 346788899999999999999999999999876655422 2457899999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeE
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGI 318 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgI 318 (473)
+|++||+.|++++|+|||+..++..+++++|++ +++++.|++|.++++.+++++ .|+|+|||.||++|+++||+||
T Consensus 413 ~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgi 489 (562)
T TIGR01511 413 VIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGI 489 (562)
T ss_pred HHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEE
Confidence 999999999999999999999999999999995 899999999999999999988 8999999999999999999999
Q ss_pred EeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038599 319 SMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGY 380 (473)
Q Consensus 319 a~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~ 380 (473)
++| .+++.+++.||++++++++..++++++++|++++++++|+.|++.||+++++++++|+
T Consensus 490 a~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 490 AIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred EeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999 7899999999999999999999999999999999999999999999999999998765
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-58 Score=521.18 Aligned_cols=395 Identities=23% Similarity=0.279 Sum_probs=298.7
Q ss_pred CccCchhHHHHHHHHHHHHHHH-Hhhhcc--------------hh--HHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSF-LGYIYH--------------PL--QSLAVAAVIFGLPAILIRSIASIKSLTFNINVL 64 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~-~~~~~~--------------~~--~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~ 64 (473)
+++++++.+++++++++.++.+ +.|++. +. .+...++++++..|+.||...++
T Consensus 279 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti---------- 348 (941)
T TIGR01517 279 SELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTI---------- 348 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHH----------
Confidence 3456677777766665544332 211110 00 12334555666677777766666
Q ss_pred HHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCC-----------HHHHHHH
Q 038599 65 ILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVS-----------LGTLLYW 133 (473)
Q Consensus 65 l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~-----------~~~ll~~ 133 (473)
+++.++.+|+|+|+++|+++++|++|++|++|||||||||+|+|+|.+++..++.++ ..+++..
T Consensus 349 -----~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 423 (941)
T TIGR01517 349 -----ALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVE 423 (941)
T ss_pred -----HHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999875432111 1122222
Q ss_pred HHhhh-------------ccCCChHHHHHHHHHHHcCCCCC-------CCCccccccc-cCCceeEEecCe---EEEEcc
Q 038599 134 VSSIE-------------SKSSHPMAAALVDYARSLAIEPV-------PENVEDFQNF-PGEGIFGKIHGN---VIYIGN 189 (473)
Q Consensus 134 ~a~~e-------------~~s~hpi~~Ai~~~a~~~~~~~~-------~~~v~~~~~~-~g~gv~~~v~g~---~~~iG~ 189 (473)
+.... ...+||++.|++++++..+.+.. .....+|... .+.++....++. .+.+|+
T Consensus 424 ~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA 503 (941)
T TIGR01517 424 GISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGA 503 (941)
T ss_pred HHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECC
Confidence 22211 12368999999999987654320 0112233321 122333333332 466788
Q ss_pred ccccCCCCC--------C---------cchhHHHHhcCCceeeEeee----------------CCeEEEEEEecCccCCc
Q 038599 190 RRIGPRTGC--------S---------KDSIAEAKCTGGKTRGYVYL----------------GATPVGTFSLSDSCRSG 236 (473)
Q Consensus 190 ~~~~~~~~~--------~---------~~~~~~~~~~~G~~vi~va~----------------d~~~lG~i~l~d~lr~~ 236 (473)
++.+...+. . .....++++++|+|++++++ |++|+|+++++|++||+
T Consensus 504 ~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~ 583 (941)
T TIGR01517 504 SEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPG 583 (941)
T ss_pred hHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchh
Confidence 766533221 1 01224678899999998875 44899999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------------------ceehccChhhHHHHHHH
Q 038599 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------------------------MVYAELLPQHKEELVEL 291 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------------------~v~a~~~P~~K~~~v~~ 291 (473)
++++|++||++|++++|+|||+..||.++|+++||..+ .+|+|++|+||.++|+.
T Consensus 584 ~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~ 663 (941)
T TIGR01517 584 VREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLM 663 (941)
T ss_pred HHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999732 59999999999999999
Q ss_pred HhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 292 LKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKG 370 (473)
Q Consensus 292 l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~ 370 (473)
||++| .|+|+|||+||+|||++||||||||.+|++.++++||+++++++|+.+++++++||++++++++|+.|.+.+|+
T Consensus 664 lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~ 743 (941)
T TIGR01517 664 LKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNV 743 (941)
T ss_pred HHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 89999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-----------HHHHHHHHHHHHHHHHHHHH--hHhhhcccccc
Q 038599 371 AVLVLAVAGY-----------PLVWVAVLTDVGTCLVVILN--SMLLLKNNLEE 411 (473)
Q Consensus 371 ~~~~la~~g~-----------~~~~~a~l~~~~s~l~v~~n--s~~l~~~~~~~ 411 (473)
..+++++.|. +.+|++++++.++++.+... .-.+.+.+|++
T Consensus 744 ~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~ 797 (941)
T TIGR01517 744 VAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIG 797 (941)
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCC
Confidence 8877776542 46899999999888888763 23334444443
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-58 Score=519.27 Aligned_cols=383 Identities=22% Similarity=0.299 Sum_probs=303.0
Q ss_pred ccCchhHHHHHHHHHHHHHHHHhhhcch--hHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 038599 3 SQKKWPAPSVMASGLLLALSFLGYIYHP--LQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAAT 80 (473)
Q Consensus 3 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~--~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak 80 (473)
++.+++..+.+++++++++........+ -..+..++++++++|+.||+..++ +++.+..+|+|
T Consensus 267 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti---------------~la~g~~~mak 331 (917)
T COG0474 267 KLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTI---------------ALALGAQRMAK 331 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHH---------------HHHHHHHHHHh
Confidence 4556666666666666555442211111 123567788889999999998888 99999999999
Q ss_pred CCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecC--CCCC------H---HHHHH---HHHhhhcc------
Q 038599 81 TGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC--DDVS------L---GTLLY---WVSSIESK------ 140 (473)
Q Consensus 81 ~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~--~~~~------~---~~ll~---~~a~~e~~------ 140 (473)
+++++|+++++|+||++|+||+|||||||+|+|+|.+++..+ ++.+ . .+++. +++.....
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999999873 2222 0 01222 12222222
Q ss_pred CCChHHHHHHHHHHHcCC--CCCC-----CCccccccccCCc-eeEEec---C--eEEEEccccccCCCCC------Cc-
Q 038599 141 SSHPMAAALVDYARSLAI--EPVP-----ENVEDFQNFPGEG-IFGKIH---G--NVIYIGNRRIGPRTGC------SK- 200 (473)
Q Consensus 141 s~hpi~~Ai~~~a~~~~~--~~~~-----~~v~~~~~~~g~g-v~~~v~---g--~~~~iG~~~~~~~~~~------~~- 200 (473)
.+||.+.||++++.+.+. .... +.+.+++.-+.+. +...++ + ..+.+|+++.+.+.+. ..
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 679999999999998776 3211 1122333322333 333343 2 3577899988743221 11
Q ss_pred -------chhHHHHhcCCceeeEeee-----------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcC
Q 038599 201 -------DSIAEAKCTGGKTRGYVYL-----------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG 256 (473)
Q Consensus 201 -------~~~~~~~~~~G~~vi~va~-----------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTG 256 (473)
....++++++|+|++.+++ |++|+|+++++||+|+|++++|+.|+++||+++|+||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 2236788999999988764 5789999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCcc---------------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccH
Q 038599 257 DSHAAALYAQDQLDHAFD---------------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDA 308 (473)
Q Consensus 257 D~~~~a~~~a~~~gi~~~---------------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~ 308 (473)
|+..||.++|+++|+..+ .||||++|+||.++|+.||+.| .|+|+|||.||+
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 999999999999997543 6899999999999999999999 899999999999
Q ss_pred HHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------
Q 038599 309 PALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAG--------- 379 (473)
Q Consensus 309 ~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g--------- 379 (473)
||||+|||||+||.+|+|+++++||+++.++++..+..++++||+++.|+++.+.+.+..|+..+++.+.+
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p 731 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLP 731 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999998899999999999999999999999999999999999999999999999744433321
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHH
Q 038599 380 ---YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 380 ---~~~~~~a~l~~~~s~l~v~~n 400 (473)
.+.+|++++++.++++.+...
T Consensus 732 ~~~~qll~inll~d~~pa~~L~~~ 755 (917)
T COG0474 732 LTPLQLLWINLLTDSLPALALGVE 755 (917)
T ss_pred HHHHHHHHHHHHHhhhhhheeecC
Confidence 247899999999988888766
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-56 Score=478.14 Aligned_cols=297 Identities=24% Similarity=0.323 Sum_probs=260.8
Q ss_pred HHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHH
Q 038599 70 LIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAAL 149 (473)
Q Consensus 70 a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai 149 (473)
....|+.||+|+|+++|+++++|++|++|++|||||||||+|+|++.++++. ++.+.++++.+++..+..++||.++|+
T Consensus 272 v~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~-~~~~~~~ll~~aa~~~~~s~hP~a~Ai 350 (675)
T TIGR01497 272 IGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPA-QGVDEKTLADAAQLASLADDTPEGKSI 350 (675)
T ss_pred HHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEec-CCCcHHHHHHHHHHhcCCCCCcHHHHH
Confidence 4457999999999999999999999999999999999999999999999875 445778889989889999999999999
Q ss_pred HHHHHHcCCCCCC--CCccccccccCC-ceeEE--ecCeEEEEccccccC----CCCCCc----chhHHHHhcCCceeeE
Q 038599 150 VDYARSLAIEPVP--ENVEDFQNFPGE-GIFGK--IHGNVIYIGNRRIGP----RTGCSK----DSIAEAKCTGGKTRGY 216 (473)
Q Consensus 150 ~~~a~~~~~~~~~--~~v~~~~~~~g~-gv~~~--v~g~~~~iG~~~~~~----~~~~~~----~~~~~~~~~~G~~vi~ 216 (473)
+.++++.+..... ....++.+++++ ++++. .+|+.+.+|+++.+. +.+... .+..+++.++|.|+++
T Consensus 351 v~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~ 430 (675)
T TIGR01497 351 VILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLV 430 (675)
T ss_pred HHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCCeEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEE
Confidence 9999887654321 122345556555 56654 378899999986542 223222 2234677899999999
Q ss_pred eeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC
Q 038599 217 VYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 217 va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g 296 (473)
+++|++++|++.++|++|||++++|++||++|++++|+|||+..+|.++|+++|++ +++++++|+||.++|+.+|++|
T Consensus 431 va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--~v~a~~~PedK~~~v~~lq~~g 508 (675)
T TIGR01497 431 VCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--DFIAEATPEDKIALIRQEQAEG 508 (675)
T ss_pred EEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--EEEcCCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999998 8999999999999999999998
Q ss_pred -cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKG 370 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~ 370 (473)
.|+|+|||.||+|||++|||||+|| +|++.++++||++++++|++.+++++++||+++-+......|++.-++
T Consensus 509 ~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~ 582 (675)
T TIGR01497 509 KLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDV 582 (675)
T ss_pred CeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccH
Confidence 8999999999999999999999999 999999999999999999999999999999999998888888876544
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-57 Score=472.57 Aligned_cols=353 Identities=22% Similarity=0.293 Sum_probs=285.0
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
-+++++.++.+|++||+..|. +++.|.+||+|++.+||++.++|+||.+++||.|||||||+|+|
T Consensus 284 ~IaVsLAVAAIPEGLPaVvT~---------------tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~M 348 (972)
T KOG0202|consen 284 KIAVSLAVAAIPEGLPAVVTT---------------TLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQM 348 (972)
T ss_pred hHHHHHHHHhccCCCcchhhh---------------hHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccce
Confidence 467788889999999988887 99999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCC-------------------------------CHHHHHHHH--------Hhhhc-------cCCChHHH
Q 038599 114 TVTDFQSICDDV-------------------------------SLGTLLYWV--------SSIES-------KSSHPMAA 147 (473)
Q Consensus 114 ~V~~i~~~~~~~-------------------------------~~~~ll~~~--------a~~e~-------~s~hpi~~ 147 (473)
.|.+++..+... ..+.+..++ +.++. ..+.|.+.
T Consensus 349 tv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~ 428 (972)
T KOG0202|consen 349 TVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEG 428 (972)
T ss_pred EEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHH
Confidence 999987553211 011121221 12221 15789999
Q ss_pred HHHHHHHHcCCCCCCC-Cc-------------------ccccccc-CCceeEEe---c----CeEEEEccccccCCCCC-
Q 038599 148 ALVDYARSLAIEPVPE-NV-------------------EDFQNFP-GEGIFGKI---H----GNVIYIGNRRIGPRTGC- 198 (473)
Q Consensus 148 Ai~~~a~~~~~~~~~~-~v-------------------~~~~~~~-g~gv~~~v---~----g~~~~iG~~~~~~~~~~- 198 (473)
|+...+++.++..... .. .+++.-. .+.+...+ . ...+.+|+++-+.+.+.
T Consensus 429 AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~ 508 (972)
T KOG0202|consen 429 ALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCST 508 (972)
T ss_pred HHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhc
Confidence 9999999887653110 00 1111111 12222222 1 24566788765433221
Q ss_pred -------C---c--------chhHHHHhcCCceeeEeee------------------------CCeEEEEEEecCccCCc
Q 038599 199 -------S---K--------DSIAEAKCTGGKTRGYVYL------------------------GATPVGTFSLSDSCRSG 236 (473)
Q Consensus 199 -------~---~--------~~~~~~~~~~G~~vi~va~------------------------d~~~lG~i~l~d~lr~~ 236 (473)
. . .+...++.++|.|++.++. |++|+|++++.||+|++
T Consensus 509 ~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~e 588 (972)
T KOG0202|consen 509 YYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPE 588 (972)
T ss_pred EEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchh
Confidence 1 1 1125677899999999873 67899999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------------------ceehccChhhHHH
Q 038599 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-----------------------------MVYAELLPQHKEE 287 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-----------------------------~v~a~~~P~~K~~ 287 (473)
++++|+.|+++||+|+|+|||+..||+++|+++|+..+ .+|+|.+|++|.+
T Consensus 589 v~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~k 668 (972)
T KOG0202|consen 589 VADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLK 668 (972)
T ss_pred HHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHH
Confidence 99999999999999999999999999999999999764 7899999999999
Q ss_pred HHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 288 LVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSV 366 (473)
Q Consensus 288 ~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~ 366 (473)
+|+.||+.| .|+|.|||+||+||||.||+|||||.+|+++++++||+|+.||||+.|..++++||+++.|+++++.|.+
T Consensus 669 IVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~l 748 (972)
T KOG0202|consen 669 IVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLL 748 (972)
T ss_pred HHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH----Hhh-------HHHHHHHHHHHHHHHHHHHHh
Q 038599 367 TVKGAVLVLAV----AGY-------PLVWVAVLTDVGTCLVVILNS 401 (473)
Q Consensus 367 ~~n~~~~~la~----~g~-------~~~~~a~l~~~~s~l~v~~ns 401 (473)
..|+..+.+.+ +|+ +.+|+++++|..++-.+-+|.
T Consensus 749 SsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 749 SSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 99996554433 343 489999999999998877774
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-56 Score=498.43 Aligned_cols=351 Identities=23% Similarity=0.312 Sum_probs=278.3
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
...++++++..|+.||...++ +++.+++||+|+|+++|+++++|+||++|++|||||||||+|+|
T Consensus 276 ~~~v~llv~aiP~~Lp~~vt~---------------~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m 340 (884)
T TIGR01522 276 TISVSLAVAAIPEGLPIIVTV---------------TLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHM 340 (884)
T ss_pred HHHHHHHHHHccchHHHHHHH---------------HHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeE
Confidence 345566677778888877766 99999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCC---------------------------CHHHHHHHHHhhhc---------cCCChHHHHHHHHHHHcC
Q 038599 114 TVTDFQSICDDV---------------------------SLGTLLYWVSSIES---------KSSHPMAAALVDYARSLA 157 (473)
Q Consensus 114 ~V~~i~~~~~~~---------------------------~~~~ll~~~a~~e~---------~s~hpi~~Ai~~~a~~~~ 157 (473)
+|.+++..++.. ...+++..++.... ..+||++.|++++++..+
T Consensus 341 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~ 420 (884)
T TIGR01522 341 TVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFG 420 (884)
T ss_pred EEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcC
Confidence 999987543210 01233333322111 125699999999998766
Q ss_pred CCCCCCCccccccccCC---ceeE---Ee--cC--eEEEEccccccCCCC--------CC--c--------chhHHHHhc
Q 038599 158 IEPVPENVEDFQNFPGE---GIFG---KI--HG--NVIYIGNRRIGPRTG--------CS--K--------DSIAEAKCT 209 (473)
Q Consensus 158 ~~~~~~~v~~~~~~~g~---gv~~---~v--~g--~~~~iG~~~~~~~~~--------~~--~--------~~~~~~~~~ 209 (473)
++........+.++|.. ...+ .. ++ ..+.+|+++.+...+ .. . ....+++++
T Consensus 421 ~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~ 500 (884)
T TIGR01522 421 LDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMAS 500 (884)
T ss_pred cHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHh
Confidence 53211112223333322 1211 11 33 245568876543221 10 1 112456788
Q ss_pred CCceeeEeeeCC-----eEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc----------
Q 038599 210 GGKTRGYVYLGA-----TPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---------- 274 (473)
Q Consensus 210 ~G~~vi~va~d~-----~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---------- 274 (473)
+|+|+++++++. +|+|+++++|++||+++++|++||++|++++|+|||+..+|.++|+++||...
T Consensus 501 ~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l 580 (884)
T TIGR01522 501 AGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKL 580 (884)
T ss_pred cCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHh
Confidence 999999998754 89999999999999999999999999999999999999999999999999732
Q ss_pred ---------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEec
Q 038599 275 ---------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMS 338 (473)
Q Consensus 275 ---------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~ 338 (473)
.+|+|++|+||.++|+.||+.| .|+|+|||.||+|||++|||||+||.++++.++++||+++++
T Consensus 581 ~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~d 660 (884)
T TIGR01522 581 DAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTD 660 (884)
T ss_pred HhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcC
Confidence 4999999999999999999999 999999999999999999999999867899999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h-------hHHHHHHHHHHHHHHHHHHH
Q 038599 339 NDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVA----G-------YPLVWVAVLTDVGTCLVVIL 399 (473)
Q Consensus 339 ~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~----g-------~~~~~~a~l~~~~s~l~v~~ 399 (473)
+|++.+++++++||++++++++|+.|.++.|+..+.+.++ + ++.+|++++++.++++.+..
T Consensus 661 d~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~ 732 (884)
T TIGR01522 661 DDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGV 732 (884)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhcc
Confidence 9999999999999999999999999999999977655432 2 24689999999998877766
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-54 Score=492.10 Aligned_cols=352 Identities=21% Similarity=0.254 Sum_probs=279.5
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
++.++++++.+|++||+..++ +++.+++||++++++||+++++|+||++++||+|||||||+|+|
T Consensus 311 ~~av~l~Va~VPegLp~~vti---------------~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M 375 (1053)
T TIGR01523 311 IYAICLAISIIPESLIAVLSI---------------TMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKM 375 (1053)
T ss_pred HHHHHHHHHHcccchHHHHHH---------------HHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceE
Confidence 456778889999999988887 99999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCC----------CC---------------------------------------C---------HHHHHHHHH
Q 038599 114 TVTDFQSICD----------DV---------------------------------------S---------LGTLLYWVS 135 (473)
Q Consensus 114 ~V~~i~~~~~----------~~---------------------------------------~---------~~~ll~~~a 135 (473)
+|.+++..+. ++ + ..+++..++
T Consensus 376 ~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 455 (1053)
T TIGR01523 376 IARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAA 455 (1053)
T ss_pred EEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 9999864210 00 0 011222222
Q ss_pred hh-----h--------ccCCChHHHHHHHHHHHcCCCCC------------------------------CCCcccccccc
Q 038599 136 SI-----E--------SKSSHPMAAALVDYARSLAIEPV------------------------------PENVEDFQNFP 172 (473)
Q Consensus 136 ~~-----e--------~~s~hpi~~Ai~~~a~~~~~~~~------------------------------~~~v~~~~~~~ 172 (473)
.. + ...++|++.|++.++...+++.. .+.+..++.-+
T Consensus 456 lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds 535 (1053)
T TIGR01523 456 LANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDS 535 (1053)
T ss_pred hccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCC
Confidence 11 0 12369999999999987665310 00111122222
Q ss_pred CCceeE-Eec---Ce---EEEEccccccCCCCCC-----------c--------chhHHHHhcCCceeeEeee-------
Q 038599 173 GEGIFG-KIH---GN---VIYIGNRRIGPRTGCS-----------K--------DSIAEAKCTGGKTRGYVYL------- 219 (473)
Q Consensus 173 g~gv~~-~v~---g~---~~~iG~~~~~~~~~~~-----------~--------~~~~~~~~~~G~~vi~va~------- 219 (473)
.+...+ .++ +. .+.+|+++.+.+.+.. . ....++++++|+|++.+++
T Consensus 536 ~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~ 615 (1053)
T TIGR01523 536 EIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKAD 615 (1053)
T ss_pred CCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchh
Confidence 223222 221 22 3568999877543311 1 1125678999999998763
Q ss_pred ------------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------
Q 038599 220 ------------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------- 274 (473)
Q Consensus 220 ------------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------- 274 (473)
|++|+|+++++|++|++++++|++||++|++++|+|||+..||.++|+++||..+
T Consensus 616 ~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~ 695 (1053)
T TIGR01523 616 NNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRD 695 (1053)
T ss_pred ccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccccccc
Confidence 4579999999999999999999999999999999999999999999999999532
Q ss_pred ----------------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCC
Q 038599 275 ----------------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGS 325 (473)
Q Consensus 275 ----------------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~ 325 (473)
.+|+|++|+||.++|+.||++| .|+|+|||.||+|||++|||||+||.+|+
T Consensus 696 ~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt 775 (1053)
T TIGR01523 696 EIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGS 775 (1053)
T ss_pred ccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCcc
Confidence 3899999999999999999999 89999999999999999999999998899
Q ss_pred ccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H----h--------hHHHHHHHHH
Q 038599 326 ALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAV----A----G--------YPLVWVAVLT 389 (473)
Q Consensus 326 ~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~----~----g--------~~~~~~a~l~ 389 (473)
+.++++||+++++++|+.+..++++||++++++++++.|.+..|+..+++.+ + | ++.+|+++++
T Consensus 776 ~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~ 855 (1053)
T TIGR01523 776 DVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMIT 855 (1053)
T ss_pred HHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999995444332 2 2 2358999999
Q ss_pred HHHHHHHHHHH
Q 038599 390 DVGTCLVVILN 400 (473)
Q Consensus 390 ~~~s~l~v~~n 400 (473)
+.++++.+.+.
T Consensus 856 d~~palaL~~e 866 (1053)
T TIGR01523 856 SCFPAMGLGLE 866 (1053)
T ss_pred HHHHHHhhccC
Confidence 99998887763
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-56 Score=466.33 Aligned_cols=346 Identities=24% Similarity=0.331 Sum_probs=284.1
Q ss_pred HHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEE
Q 038599 39 VIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDF 118 (473)
Q Consensus 39 v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i 118 (473)
+++..+|++||..+|+ +++.+++||.+.+.|+|+++++|+||+.++||.|||||||.|+|+|.+.
T Consensus 392 ilVVAVPEGLPLAVTL---------------sLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~ 456 (1034)
T KOG0204|consen 392 ILVVAVPEGLPLAVTL---------------SLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQS 456 (1034)
T ss_pred EEEEECCCCccHHHHH---------------HHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEee
Confidence 3455679999988887 9999999999999999999999999999999999999999999999998
Q ss_pred EecCCCCCH---------HHHHHHH-Hh-----------------hhccCCChHHHHHHHHHHHcCCCCCCCC-------
Q 038599 119 QSICDDVSL---------GTLLYWV-SS-----------------IESKSSHPMAAALVDYARSLAIEPVPEN------- 164 (473)
Q Consensus 119 ~~~~~~~~~---------~~ll~~~-a~-----------------~e~~s~hpi~~Ai~~~a~~~~~~~~~~~------- 164 (473)
+..++.+.. ..+..+. .. .....++|.++||+.+....|.+.+..+
T Consensus 457 ~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~k 536 (1034)
T KOG0204|consen 457 YIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVK 536 (1034)
T ss_pred eeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeE
Confidence 765433221 1111111 11 1233579999999999988876642221
Q ss_pred ccccccccC-CceeEEe-cCe--EEEEccccccCCCCCC------------------cchhHHHHhcCCceeeEeee---
Q 038599 165 VEDFQNFPG-EGIFGKI-HGN--VIYIGNRRIGPRTGCS------------------KDSIAEAKCTGGKTRGYVYL--- 219 (473)
Q Consensus 165 v~~~~~~~g-~gv~~~v-~g~--~~~iG~~~~~~~~~~~------------------~~~~~~~~~~~G~~vi~va~--- 219 (473)
+..|.+... .|+.... ++. .+.+|+.+.+...+.. ....++.++.+|.|.+++++
T Consensus 537 v~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df 616 (1034)
T KOG0204|consen 537 VYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDF 616 (1034)
T ss_pred EeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeecc
Confidence 222222211 1222221 222 4566776654322211 12236888999999998875
Q ss_pred ------------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------
Q 038599 220 ------------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------- 274 (473)
Q Consensus 220 ------------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------- 274 (473)
|++++|+++++||+|||++++|+.|+++|+.|.|+||||..||+++|.+|||..+
T Consensus 617 ~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~l 696 (1034)
T KOG0204|consen 617 VAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLAL 696 (1034)
T ss_pred ccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCcccee
Confidence 3479999999999999999999999999999999999999999999999999764
Q ss_pred --------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccccccc
Q 038599 275 --------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGH 333 (473)
Q Consensus 275 --------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad 333 (473)
.|.||.+|.||.-+|+.|++.| .|+..|||+||+|||++||||.|||..|+++|+|++|
T Consensus 697 EG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSD 776 (1034)
T KOG0204|consen 697 EGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASD 776 (1034)
T ss_pred cchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCC
Confidence 7899999999999999999999 8999999999999999999999999999999999999
Q ss_pred EEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHHHHHH
Q 038599 334 VILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAG-----------YPLVWVAVLTDVGTCLVVIL 399 (473)
Q Consensus 334 ~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g-----------~~~~~~a~l~~~~s~l~v~~ 399 (473)
++++||||+.+..+++|||..+.+|+++++|.++.|++++.+++.+ .+.+|+|++||.+.+|++..
T Consensus 777 IIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALAT 853 (1034)
T KOG0204|consen 777 IIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALAT 853 (1034)
T ss_pred eEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999998888765 36899999999999998876
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-53 Score=484.41 Aligned_cols=382 Identities=19% Similarity=0.183 Sum_probs=289.7
Q ss_pred ccCchhHHHHHHHHHHHHHHHHhhhcchh-HHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 3 SQKKWPAPSVMASGLLLALSFLGYIYHPL-QSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 3 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
++.+++.++++++++++++......+... .+.++++++++..|+.||...++ +++.++.+|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i---------------~l~~~~~~m~~~ 328 (997)
T TIGR01106 264 HFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTV---------------CLTLTAKRMARK 328 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHH---------------HHHHHHHHHHHC
Confidence 44556666666555554443221111111 22345566666778888877666 899999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCC-------------CC-----HHHHHHHHHhhh-----
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDD-------------VS-----LGTLLYWVSSIE----- 138 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~-------------~~-----~~~ll~~~a~~e----- 138 (473)
|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.. .+ .+.++..++...
T Consensus 329 ~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~ 408 (997)
T TIGR01106 329 NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFK 408 (997)
T ss_pred CcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeec
Confidence 9999999999999999999999999999999999998743210 01 013443333221
Q ss_pred -----------ccCCChHHHHHHHHHHHcCCCC-----CCCCccccccccCCceeEE-e---c--C---eEEEEcccccc
Q 038599 139 -----------SKSSHPMAAALVDYARSLAIEP-----VPENVEDFQNFPGEGIFGK-I---H--G---NVIYIGNRRIG 193 (473)
Q Consensus 139 -----------~~s~hpi~~Ai~~~a~~~~~~~-----~~~~v~~~~~~~g~gv~~~-v---~--g---~~~~iG~~~~~ 193 (473)
...++|++.|+++++...+.+. ....+..++..+.+..... + + + ..+.+|+++.+
T Consensus 409 ~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~I 488 (997)
T TIGR01106 409 AGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERI 488 (997)
T ss_pred cccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHH
Confidence 1136899999999987543221 1112222222223332222 2 1 1 23678999876
Q ss_pred CCCCCC---------c--------chhHHHHhcCCceeeEeee------------------------CCeEEEEEEecCc
Q 038599 194 PRTGCS---------K--------DSIAEAKCTGGKTRGYVYL------------------------GATPVGTFSLSDS 232 (473)
Q Consensus 194 ~~~~~~---------~--------~~~~~~~~~~G~~vi~va~------------------------d~~~lG~i~l~d~ 232 (473)
.+.+.. . ....++++++|+|++.+++ |++|+|+++++||
T Consensus 489 l~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dp 568 (997)
T TIGR01106 489 LERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDP 568 (997)
T ss_pred HHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCC
Confidence 443210 0 1124668899999987762 4579999999999
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--------------------------------------
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------------------------------------- 274 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------------------------------- 274 (473)
+|++++++|++|+++|++++|+|||+..+|.++++++|+..+
T Consensus 569 lr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~ 648 (997)
T TIGR01106 569 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT 648 (997)
T ss_pred ChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCC
Confidence 999999999999999999999999999999999999999421
Q ss_pred -------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCC
Q 038599 275 -------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSND 340 (473)
Q Consensus 275 -------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~ 340 (473)
.||+|++|+||.++|+.||+.| .|+|+|||.||+|||++|||||+||.+|++.++++||+++++++
T Consensus 649 ~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~ 728 (997)
T TIGR01106 649 SEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDN 728 (997)
T ss_pred HHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCC
Confidence 2999999999999999999999 89999999999999999999999997899999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h-------hHHHHHHHHHHHHHHHHHHH
Q 038599 341 IRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVA----G-------YPLVWVAVLTDVGTCLVVIL 399 (473)
Q Consensus 341 l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~----g-------~~~~~~a~l~~~~s~l~v~~ 399 (473)
|+.+++++++||+++.|+++++.|.+..|+..++..+. + ++.+|++++++.++++.+..
T Consensus 729 f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~ 798 (997)
T TIGR01106 729 FASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAY 798 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999865444332 2 24689999999999988877
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-53 Score=449.58 Aligned_cols=341 Identities=26% Similarity=0.332 Sum_probs=280.9
Q ss_pred chhHHHHHHHHHHHHHHHHhhhcch----hHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 6 KWPAPSVMASGLLLALSFLGYIYHP----LQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 6 ~~~~~~~i~~~i~~~~~~~~~~~~~----~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
.|+.++++++++++++.+..+.+.+ ..+...+++++...|..++...++ ++..+..+|+++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~---------------~~~~~~~~~~~~ 214 (499)
T TIGR01494 150 IIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTI---------------ALAVGDARLAKK 214 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHH---------------HHHHHHHHHHHC
Confidence 5666666666666555443322221 111233344444445555544433 888999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCCC
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPV 161 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~~ 161 (473)
|+++|+++++|++|++|++|||||||||+|+|+|.+++..+. +..++||+++|++++++....
T Consensus 215 gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------~~~s~hp~~~ai~~~~~~~~~--- 277 (499)
T TIGR01494 215 GIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------EYLSGHPDERALVKSAKWKIL--- 277 (499)
T ss_pred CcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC--------------CcCCCChHHHHHHHHhhhcCc---
Confidence 999999999999999999999999999999999999986532 467899999999999975432
Q ss_pred CCCccccccccCCceeEEecC--eEEEEccccccCCCCCCcchhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHH
Q 038599 162 PENVEDFQNFPGEGIFGKIHG--NVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALE 239 (473)
Q Consensus 162 ~~~v~~~~~~~g~gv~~~v~g--~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~ 239 (473)
...+|...+ +|+.+.+++ +.+.+|+++++.+.+....+..+++.++|+++++++++.+++|++.++|++|+++++
T Consensus 278 --~~~~f~~~~-~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~ 354 (499)
T TIGR01494 278 --NVFEFSSVR-KRMSVIVRGPDGTYVKGAPEFVLSRVKDLEEKVKELAQSGLRVLAVASKETLLGLLGLEDPLRDDAKE 354 (499)
T ss_pred --ceeccCCCC-ceEEEEEecCCcEEEeCCHHHHHHhhHHHHHHHHHHHhCCCEEEEEEECCeEEEEEEecCCCchhHHH
Confidence 345667676 788887764 678999999886654332333456778999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeE
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGI 318 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgI 318 (473)
+|++|+++|++++|+|||+..++..+|+++|+ +++++|++|.++|+.+|+.| .|+|+|||.||+||+++|||||
T Consensus 355 ~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-----~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgi 429 (499)
T TIGR01494 355 TISELREAGIRVIMLTGDNVLTAKAIAKELGI-----FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGI 429 (499)
T ss_pred HHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-----eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCcc
Confidence 99999999999999999999999999999997 79999999999999999999 8999999999999999999999
Q ss_pred EeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 038599 319 SMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCL 395 (473)
Q Consensus 319 a~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~~~~~~a~l~~~~s~l 395 (473)
+++ ++++||++++++++..++.++++||++++++++|+.|++.||++.+++++.++. .+.+++..+++
T Consensus 430 a~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~---~~~~~~~~~~~ 497 (499)
T TIGR01494 430 AMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV---LNLVPPGLAAL 497 (499)
T ss_pred ccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhcchhhh
Confidence 996 688999999999999999999999999999999999999999999999987653 55555554443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-53 Score=482.79 Aligned_cols=349 Identities=19% Similarity=0.216 Sum_probs=272.0
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
+..+.++++..|+.||+..++ +++.|+.||+|+||+||++.++|.+|++|++|||||||||+|+|
T Consensus 400 l~~l~iiv~~vP~~LP~~~ti---------------~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m 464 (1054)
T TIGR01657 400 LRSLDIITIVVPPALPAELSI---------------GINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGL 464 (1054)
T ss_pred HHHHHHHHhhcCchHHHHHHH---------------HHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCe
Confidence 445666777888899988777 99999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCC------------HHHHHHHHHhhh-------ccCCChHHHHHHHHHHHcCCC-CC------------
Q 038599 114 TVTDFQSICDDVS------------LGTLLYWVSSIE-------SKSSHPMAAALVDYARSLAIE-PV------------ 161 (473)
Q Consensus 114 ~V~~i~~~~~~~~------------~~~ll~~~a~~e-------~~s~hpi~~Ai~~~a~~~~~~-~~------------ 161 (473)
+|.+++..++... ...++...+... ...+||++.|++++....... ..
T Consensus 465 ~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~ 544 (1054)
T TIGR01657 465 DLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVR 544 (1054)
T ss_pred eEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCccccccccccee
Confidence 9999986543111 111222222211 235899999999986321100 00
Q ss_pred ----CCC---ccccccccCC-ceeEEe--c--Ce--EEEEccccccCCCCCC------cchhHHHHhcCCceeeEeee--
Q 038599 162 ----PEN---VEDFQNFPGE-GIFGKI--H--GN--VIYIGNRRIGPRTGCS------KDSIAEAKCTGGKTRGYVYL-- 219 (473)
Q Consensus 162 ----~~~---v~~~~~~~g~-gv~~~v--~--g~--~~~iG~~~~~~~~~~~------~~~~~~~~~~~G~~vi~va~-- 219 (473)
... +..|+.-+.. .++..+ + ++ .+.+|+|+.+.+.+.. ..+..++++++|+|++++++
T Consensus 545 ~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~ 624 (1054)
T TIGR01657 545 TDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKE 624 (1054)
T ss_pred ccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEee
Confidence 000 1111111112 223222 1 22 5788999988765431 23346789999999999873
Q ss_pred -------------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------
Q 038599 220 -------------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------ 274 (473)
Q Consensus 220 -------------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------ 274 (473)
|++|+|+++|+|++||+++++|++||++|++++|+|||+..||.++|+++||..+
T Consensus 625 l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~ 704 (1054)
T TIGR01657 625 LPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLIL 704 (1054)
T ss_pred cCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEE
Confidence 4689999999999999999999999999999999999999999999999999310
Q ss_pred ---------------------------------------------------------------------------ceehc
Q 038599 275 ---------------------------------------------------------------------------MVYAE 279 (473)
Q Consensus 275 ---------------------------------------------------------------------------~v~a~ 279 (473)
.||||
T Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR 784 (1054)
T TIGR01657 705 AEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFAR 784 (1054)
T ss_pred eecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEe
Confidence 48999
Q ss_pred cChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHH
Q 038599 280 LLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKL 358 (473)
Q Consensus 280 ~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i 358 (473)
++|+||.++|+.||+.| .|+|+|||.||+||||+|||||||| ..+ +..+||+++.+++++.++.++++||+++.++
T Consensus 785 ~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~--~~d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~ 861 (1054)
T TIGR01657 785 MAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS--EAE-ASVAAPFTSKLASISCVPNVIREGRCALVTS 861 (1054)
T ss_pred cCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeec--ccc-ceeecccccCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999997 334 4488999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH----h-----hHHHHHHHHHHHHHHHHHHHH
Q 038599 359 IQNVTLSVTVKGAVLVLAVA----G-----YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 359 ~~n~~~~~~~n~~~~~la~~----g-----~~~~~~a~l~~~~s~l~v~~n 400 (473)
++.+.|.+.|+++.+...+. | ++.+|++++++...++.+...
T Consensus 862 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~ 912 (1054)
T TIGR01657 862 FQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFLTIDLLLIFPVALLMSRN 912 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcCccHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999865443322 2 356899998887776665543
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-52 Score=466.20 Aligned_cols=348 Identities=22% Similarity=0.296 Sum_probs=276.2
Q ss_pred HHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEE
Q 038599 36 VAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTV 115 (473)
Q Consensus 36 ~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V 115 (473)
.++++++..|+.||...++ +++.++++|+++|+++|+++++|+||++|++|||||||||+|+|+|
T Consensus 243 ~i~l~v~~iP~~Lp~~vti---------------~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v 307 (917)
T TIGR01116 243 AVALAVAAIPEGLPAVITT---------------CLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSV 307 (917)
T ss_pred HHhhhhhccccccHHHHHH---------------HHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEE
Confidence 4456677788888877776 9999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCC-------------CC-------------------HHHHHHHHHhhhc--------------cCCChHHHHH
Q 038599 116 TDFQSICDD-------------VS-------------------LGTLLYWVSSIES--------------KSSHPMAAAL 149 (473)
Q Consensus 116 ~~i~~~~~~-------------~~-------------------~~~ll~~~a~~e~--------------~s~hpi~~Ai 149 (473)
.+++..++. ++ .++++..+ ++.+ ..++|.+.|+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~lc~~~~~~~~~~~~~~~~~gdp~E~AL 386 (917)
T TIGR01116 308 CKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIA-ALCNDSSLDFNERKGVYEKVGEATEAAL 386 (917)
T ss_pred EEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHH-HhcCCCeeeccccCCceeeccChhHHHH
Confidence 998754310 00 11122222 2111 1369999999
Q ss_pred HHHHHHcCCCCCCC---------------------CccccccccC-CceeEEec--C--eEEEEccccccCCCCCC----
Q 038599 150 VDYARSLAIEPVPE---------------------NVEDFQNFPG-EGIFGKIH--G--NVIYIGNRRIGPRTGCS---- 199 (473)
Q Consensus 150 ~~~a~~~~~~~~~~---------------------~v~~~~~~~g-~gv~~~v~--g--~~~~iG~~~~~~~~~~~---- 199 (473)
+.++++.+++.... .+..++.-+. +.+...++ + ..+.+|+++.+.+.+..
T Consensus 387 l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~ 466 (917)
T TIGR01116 387 KVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNG 466 (917)
T ss_pred HHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecC
Confidence 99988766542100 1111111112 22333332 2 34667999876543311
Q ss_pred ------cc--------hhHHHHhc-CCceeeEeee-----------------------CCeEEEEEEecCccCCchHHHH
Q 038599 200 ------KD--------SIAEAKCT-GGKTRGYVYL-----------------------GATPVGTFSLSDSCRSGALEAI 241 (473)
Q Consensus 200 ------~~--------~~~~~~~~-~G~~vi~va~-----------------------d~~~lG~i~l~d~lr~~a~~~I 241 (473)
.+ +..+++++ +|+|++.+++ |.+|+|+++++||+|++++++|
T Consensus 467 ~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I 546 (917)
T TIGR01116 467 DGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAI 546 (917)
T ss_pred CCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHH
Confidence 11 12567788 9999998862 4589999999999999999999
Q ss_pred HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------------------ceehccChhhHHHHHHHH
Q 038599 242 KDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-----------------------------MVYAELLPQHKEELVELL 292 (473)
Q Consensus 242 ~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-----------------------------~v~a~~~P~~K~~~v~~l 292 (473)
++||++|++++|+|||+..+|.++|+++|+..+ .+++|++|+||.++|+.+
T Consensus 547 ~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l 626 (917)
T TIGR01116 547 EKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELL 626 (917)
T ss_pred HHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHH
Confidence 999999999999999999999999999999641 489999999999999999
Q ss_pred hhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 293 KKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGA 371 (473)
Q Consensus 293 ~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~ 371 (473)
|+.| .|+|+|||.||+|||++|||||+|| +|++.++++||+++.+++|..+.+++++||++++++++++.|.+..|+.
T Consensus 627 q~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~ 705 (917)
T TIGR01116 627 QEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIG 705 (917)
T ss_pred HhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 9998 8999999999999999999999999 8999999999999999999999999999999999999999999999996
Q ss_pred HHHHHHH----h-------hHHHHHHHHHHHHHHHHHHHH
Q 038599 372 VLVLAVA----G-------YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 372 ~~~la~~----g-------~~~~~~a~l~~~~s~l~v~~n 400 (473)
.+++.+. | ++.+|++++++.++++.+.+.
T Consensus 706 ~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~ 745 (917)
T TIGR01116 706 EVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFN 745 (917)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5444332 3 246899999999998887663
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-45 Score=388.16 Aligned_cols=321 Identities=20% Similarity=0.249 Sum_probs=248.6
Q ss_pred HHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEE
Q 038599 40 IFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQ 119 (473)
Q Consensus 40 ~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~ 119 (473)
+....|+.||+..++ +...|.+||.|+||+|.+|+++...|++|++|||||||||++.+++.++.
T Consensus 426 iTi~VPPALPAaltv---------------G~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 426 ITIVVPPALPAALTV---------------GIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred EEEecCCCchhhhhH---------------HHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 444567788888877 99999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCHHH----HH--------------------HHHH------hhh----ccCCChHHHHHHHHHHHc---------
Q 038599 120 SICDDVSLGT----LL--------------------YWVS------SIE----SKSSHPMAAALVDYARSL--------- 156 (473)
Q Consensus 120 ~~~~~~~~~~----ll--------------------~~~a------~~e----~~s~hpi~~Ai~~~a~~~--------- 156 (473)
+.++..+... .. .+.+ ++. .-.++|++..+++....-
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~ 570 (1140)
T KOG0208|consen 491 PVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDE 570 (1140)
T ss_pred eccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccch
Confidence 7654321110 00 0111 111 113466666655542110
Q ss_pred ------CCCCCCCCccc--cccc--cCC----------------ceeEEe--cC----eEEEEccccccCCCCCC-----
Q 038599 157 ------AIEPVPENVED--FQNF--PGE----------------GIFGKI--HG----NVIYIGNRRIGPRTGCS----- 199 (473)
Q Consensus 157 ------~~~~~~~~v~~--~~~~--~g~----------------gv~~~v--~g----~~~~iG~~~~~~~~~~~----- 199 (473)
...|...++.+ +... .+. .++..+ .+ ..+.+|+||++.+.+.+
T Consensus 571 ~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~ 650 (1140)
T KOG0208|consen 571 ATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPA 650 (1140)
T ss_pred hhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCc
Confidence 00000000000 0000 011 122222 11 35778999988665443
Q ss_pred -cchhHHHHhcCCceeeEeee---------------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCC
Q 038599 200 -KDSIAEAKCTGGKTRGYVYL---------------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGD 257 (473)
Q Consensus 200 -~~~~~~~~~~~G~~vi~va~---------------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD 257 (473)
+.+.+++|+.+|+|++++|. |++|+|++.|++++|++++.+|++|++++||++|+|||
T Consensus 651 dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGD 730 (1140)
T KOG0208|consen 651 DYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGD 730 (1140)
T ss_pred cHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCC
Confidence 34558999999999999973 67999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCcc---------------------------------------------------------------
Q 038599 258 SHAAALYAQDQLDHAFD--------------------------------------------------------------- 274 (473)
Q Consensus 258 ~~~~a~~~a~~~gi~~~--------------------------------------------------------------- 274 (473)
|..||..+||++||..+
T Consensus 731 NllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~ 810 (1140)
T KOG0208|consen 731 NLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGK 810 (1140)
T ss_pred chheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCc
Confidence 99999999999999764
Q ss_pred --------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccccccc
Q 038599 275 --------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGH 333 (473)
Q Consensus 275 --------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad 333 (473)
.|||||+|+||.++|+.||+.| .|+|||||.||+.|||+|||||+++ ...|.-+|.
T Consensus 811 ~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLS---eaEASvAAp 887 (1140)
T KOG0208|consen 811 TFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLS---EAEASVAAP 887 (1140)
T ss_pred hhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchh---hhhHhhcCc
Confidence 7999999999999999999999 9999999999999999999999994 233566799
Q ss_pred EEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 334 VILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVA 378 (473)
Q Consensus 334 ~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~ 378 (473)
+...-.++++++++|++||+++-+....+++..+|.++.+...++
T Consensus 888 FTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~ 932 (1140)
T KOG0208|consen 888 FTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVF 932 (1140)
T ss_pred cccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe
Confidence 998878999999999999999999999999999999887766554
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=393.67 Aligned_cols=392 Identities=20% Similarity=0.221 Sum_probs=292.5
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHH-HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQS-LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAAT 80 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak 80 (473)
+++.+++....+.+++.+|+..+...|..+.. .+.++++++..|++|++..|+ .+..-.+||++
T Consensus 285 ~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv---------------~LtltakrMa~ 349 (1019)
T KOG0203|consen 285 EHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTV---------------CLTLTAKRMAR 349 (1019)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehh---------------hHHHHHHHHhh
Confidence 46677888888888888875544323333321 335667788899999998888 88899999999
Q ss_pred CCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCC------------------HHHHHHHHHhhh----
Q 038599 81 TGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVS------------------LGTLLYWVSSIE---- 138 (473)
Q Consensus 81 ~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~------------------~~~ll~~~a~~e---- 138 (473)
+++++|++++.|++|...++|.|||||||+|+|+|.+++..+.-.+ -.++...+ .+.
T Consensus 350 Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~-~lCn~a~ 428 (1019)
T KOG0203|consen 350 KNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA-TLCNRAV 428 (1019)
T ss_pred ceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH-HHhCcce
Confidence 9999999999999999999999999999999999999876532100 01122211 111
Q ss_pred -------------ccCCChHHHHHHHHHHHcCCCC-----CCCCccccccccCCceeEEe----c-----CeEEEEcccc
Q 038599 139 -------------SKSSHPMAAALVDYARSLAIEP-----VPENVEDFQNFPGEGIFGKI----H-----GNVIYIGNRR 191 (473)
Q Consensus 139 -------------~~s~hpi~~Ai~~~a~~~~~~~-----~~~~v~~~~~~~g~gv~~~v----~-----g~~~~iG~~~ 191 (473)
.-.+++.+.|++.++..-.... ....+.+.....-+.....+ + --.+.+|+++
T Consensus 429 ~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape 508 (1019)
T KOG0203|consen 429 FKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPE 508 (1019)
T ss_pred ecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChH
Confidence 1246899999999975432110 00111111111111111111 1 1235568887
Q ss_pred ccCCCCCCc---------chh--------HHHHhcCCceeeEee------------------------eCCeEEEEEEec
Q 038599 192 IGPRTGCSK---------DSI--------AEAKCTGGKTRGYVY------------------------LGATPVGTFSLS 230 (473)
Q Consensus 192 ~~~~~~~~~---------~~~--------~~~~~~~G~~vi~va------------------------~d~~~lG~i~l~ 230 (473)
.+.+.+... +.. ..++...|.||+.++ .+..|+|++.+.
T Consensus 509 ~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~i 588 (1019)
T KOG0203|consen 509 RILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMI 588 (1019)
T ss_pred HHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhcc
Confidence 664433221 111 233344444555432 356899999999
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------------------------
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------------------------ 274 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------------------------ 274 (473)
||+|..+++++..||++|++++|+|||++.||.++|+++||..+
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~ 668 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPD 668 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccc
Confidence 99999999999999999999999999999999999999997653
Q ss_pred ---------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEec
Q 038599 275 ---------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMS 338 (473)
Q Consensus 275 ---------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~ 338 (473)
.||||.+|+||.-||+..|+.| .|+..|||.||+||||.||||||||..|+|+++.+||++++|
T Consensus 669 ~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLD 748 (1019)
T KOG0203|consen 669 MSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLD 748 (1019)
T ss_pred cCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEec
Confidence 6899999999999999999999 999999999999999999999999999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhH-------HHHHHHHHHHHHHHHHHHH---hHhh
Q 038599 339 NDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAV----LVLAVAGYP-------LVWVAVLTDVGTCLVVILN---SMLL 404 (473)
Q Consensus 339 ~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~----~~la~~g~~-------~~~~a~l~~~~s~l~v~~n---s~~l 404 (473)
+||.+|+.-+++||-++.|.|+.+.|.++.|+-- +++-++|+| .+.+.+.+|..+++.+... |-.+
T Consensus 749 DNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM 828 (1019)
T KOG0203|consen 749 DNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIM 828 (1019)
T ss_pred CcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHH
Confidence 9999999999999999999999999999999832 333345665 4567778899999988874 4455
Q ss_pred hcccc
Q 038599 405 LKNNL 409 (473)
Q Consensus 405 ~~~~~ 409 (473)
+|.++
T Consensus 829 ~r~PR 833 (1019)
T KOG0203|consen 829 LRPPR 833 (1019)
T ss_pred hcCCC
Confidence 44443
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=360.97 Aligned_cols=282 Identities=24% Similarity=0.370 Sum_probs=242.6
Q ss_pred HHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHH
Q 038599 72 FCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVD 151 (473)
Q Consensus 72 ~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~ 151 (473)
.+|+.|+.+.+++-++++++|..|++|++..|||||+|-|+-.-.++++. ++.+.+++...+....-..+.|-.+.|+.
T Consensus 274 IAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~-~gv~~~~la~aa~lsSl~DeTpEGrSIV~ 352 (681)
T COG2216 274 IAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPV-PGVSEEELADAAQLASLADETPEGRSIVE 352 (681)
T ss_pred hhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecC-CCCCHHHHHHHHHHhhhccCCCCcccHHH
Confidence 37899999999999999999999999999999999999999999999998 67888888776665556678899999999
Q ss_pred HHHHcCCCCCCCCc---cccccccC-CceeE-Ee-cCeEEEEcccccc----CCCCCCcch----hHHHHhcCCceeeEe
Q 038599 152 YARSLAIEPVPENV---EDFQNFPG-EGIFG-KI-HGNVIYIGNRRIG----PRTGCSKDS----IAEAKCTGGKTRGYV 217 (473)
Q Consensus 152 ~a~~~~~~~~~~~v---~~~~~~~g-~gv~~-~v-~g~~~~iG~~~~~----~~~~~~~~~----~~~~~~~~G~~vi~v 217 (473)
.+++.++....... .+|.++.. ..+++ .. +++.+++|+.+-+ .+.+-..++ ..++.++.|.+++.+
T Consensus 353 LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~~~~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V 432 (681)
T COG2216 353 LAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLPGGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVV 432 (681)
T ss_pred HHHHhccCCCcccccccceeeecceecccccccCCCCceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEE
Confidence 99998765422221 13333322 12333 12 3478999996433 333333333 357778999999999
Q ss_pred eeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-
Q 038599 218 YLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG- 296 (473)
Q Consensus 218 a~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g- 296 (473)
..|++++|++.++|.+||+.+|-+.+||++|++.+|+||||+.||..+|++.|++ .+.++.+||+|.+.|+.-|.+|
T Consensus 433 ~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD--dfiAeatPEdK~~~I~~eQ~~gr 510 (681)
T COG2216 433 VENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFIAEATPEDKLALIRQEQAEGR 510 (681)
T ss_pred EECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch--hhhhcCChHHHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHH
Q 038599 297 ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTK 357 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~ 357 (473)
-|+|+|||.||+|||++||||++|+ +|++.++|+++.|=+|+|..++.+++..|++.+-+
T Consensus 511 lVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiT 570 (681)
T COG2216 511 LVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLIT 570 (681)
T ss_pred EEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheee
Confidence 8999999999999999999999998 99999999999999999999999999999987654
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=393.61 Aligned_cols=342 Identities=19% Similarity=0.249 Sum_probs=253.8
Q ss_pred HHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHH------HHHHHC----CceeeCchHhhhhcCccEEEEcCC
Q 038599 36 VAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAF------SKAATT----GLLVKGGDYLEILAKVKMVALDKT 105 (473)
Q Consensus 36 ~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~------~~lak~----gilvk~~~~lE~lg~vd~i~fDKT 105 (473)
.+.+...++|+.|+...++ +..... .+|.++ ++++|+.+..|+||++++||+|||
T Consensus 303 ~~~L~~~~IPisL~v~l~l---------------~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKT 367 (1057)
T TIGR01652 303 FLILFSSLIPISLYVSLEL---------------VKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKT 367 (1057)
T ss_pred HHHHHhhhcceeeeehHHH---------------HHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCC
Confidence 3344445667666655544 445555 667764 599999999999999999999999
Q ss_pred CcCCCCceEEEEEEecCCCC-----------------------------------C----------------HHHHHHHH
Q 038599 106 GTVTRGEFTVTDFQSICDDV-----------------------------------S----------------LGTLLYWV 134 (473)
Q Consensus 106 GTLT~g~~~V~~i~~~~~~~-----------------------------------~----------------~~~ll~~~ 134 (473)
||||+|+|++.++...+..+ + ..+.+..+
T Consensus 368 GTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 447 (1057)
T TIGR01652 368 GTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLAL 447 (1057)
T ss_pred CceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHH
Confidence 99999999999986421100 0 01111111
Q ss_pred H---hh--h---c-------cCCChHHHHHHHHHHHcCCCCCC---C----------C--------ccccccccCCceeE
Q 038599 135 S---SI--E---S-------KSSHPMAAALVDYARSLAIEPVP---E----------N--------VEDFQNFPGEGIFG 178 (473)
Q Consensus 135 a---~~--e---~-------~s~hpi~~Ai~~~a~~~~~~~~~---~----------~--------v~~~~~~~g~gv~~ 178 (473)
+ .+ + . ..++|.+.|++++++..|+.... . . ..+|... .+.++.
T Consensus 448 ~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~-rKrmSv 526 (1057)
T TIGR01652 448 ALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSD-RKRMSV 526 (1057)
T ss_pred HhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCC-CCeEEE
Confidence 1 11 1 1 14689999999999887754210 0 0 0111111 122444
Q ss_pred Eec---C--eEEEEccccccCCCCCC--------cchhHHHHhcCCceeeEee---------------------------
Q 038599 179 KIH---G--NVIYIGNRRIGPRTGCS--------KDSIAEAKCTGGKTRGYVY--------------------------- 218 (473)
Q Consensus 179 ~v~---g--~~~~iG~~~~~~~~~~~--------~~~~~~~~~~~G~~vi~va--------------------------- 218 (473)
.++ + ..+.+|+++.+.+.... ..+.+++++.+|+|++.++
T Consensus 527 iv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~ 606 (1057)
T TIGR01652 527 IVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDRE 606 (1057)
T ss_pred EEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHH
Confidence 332 2 24677998776443221 1223678899999998775
Q ss_pred -----------eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------
Q 038599 219 -----------LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------- 274 (473)
Q Consensus 219 -----------~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------- 274 (473)
.|++|+|+++++|++|++++++|+.||++||+++|+|||+.+||.++|+++|+..+
T Consensus 607 ~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~ 686 (1057)
T TIGR01652 607 EKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLD 686 (1057)
T ss_pred HHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchh
Confidence 26789999999999999999999999999999999999999999999999997420
Q ss_pred -----------------------------------------------------------ceehccChhhHHHHHHHHhhC
Q 038599 275 -----------------------------------------------------------MVYAELLPQHKEELVELLKKD 295 (473)
Q Consensus 275 -----------------------------------------------------------~v~a~~~P~~K~~~v~~l~~~ 295 (473)
.|++|++|+||.++|+.+|+.
T Consensus 687 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~ 766 (1057)
T TIGR01652 687 ATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKS 766 (1057)
T ss_pred hhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhc
Confidence 289999999999999999998
Q ss_pred -C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCc--cccccccEEEecCCcccHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 038599 296 -G-ATAMVGDGINDAPALAAVDIGISMGISGSA--LAMESGHVILMSNDIRKIPKAI-KLARKASTKLIQNVTLSVTVKG 370 (473)
Q Consensus 296 -g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~--~a~~~ad~vl~~~~l~~l~~~i-~~~r~~~~~i~~n~~~~~~~n~ 370 (473)
| .|+|+|||.||++||++|||||++ .|.+ .|+.+||+++ .+|+.+..++ .+||..++++++.+.|.+.-|+
T Consensus 767 ~~~~vl~iGDG~ND~~mlk~AdVGIgi--~g~eg~qA~~aaD~~i--~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~ 842 (1057)
T TIGR01652 767 TGKTTLAIGDGANDVSMIQEADVGVGI--SGKEGMQAVMASDFAI--GQFRFLTKLLLVHGRWSYKRISKMILYFFYKNL 842 (1057)
T ss_pred CCCeEEEEeCCCccHHHHhhcCeeeEe--cChHHHHHHHhhhhhh--hhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 7 899999999999999999999987 4555 5889999999 5699999987 8899999999999999999998
Q ss_pred HHHHHHHH--------h------hHHHHHHHHHHHHHHHHH
Q 038599 371 AVLVLAVA--------G------YPLVWVAVLTDVGTCLVV 397 (473)
Q Consensus 371 ~~~~la~~--------g------~~~~~~a~l~~~~s~l~v 397 (473)
+.++..+. | +...|.+++++.+++++.
T Consensus 843 ~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l 883 (1057)
T TIGR01652 843 IFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISL 883 (1057)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 65544322 1 125677888888887766
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=338.47 Aligned_cols=344 Identities=21% Similarity=0.285 Sum_probs=266.4
Q ss_pred HHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEE--
Q 038599 40 IFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTD-- 117 (473)
Q Consensus 40 ~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~-- 117 (473)
+++-+|..+|+..+. ..++|..||+++|.++|+..++|.|+.+|++|.|||||||.|+++|.+
T Consensus 285 lIGgiPiamPtVlsv---------------TMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl 349 (942)
T KOG0205|consen 285 LIGGIPIAMPTVLSV---------------TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL 349 (942)
T ss_pred eecccccccceeeee---------------hhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCc
Confidence 445467777776665 889999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhh-hccCCChHHHHHHHHHHHcCCCCCCCCcccccccc--CCceeEEe---cC--eEEEEcc
Q 038599 118 FQSICDDVSLGTLLYWVSSI-ESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFP--GEGIFGKI---HG--NVIYIGN 189 (473)
Q Consensus 118 i~~~~~~~~~~~ll~~~a~~-e~~s~hpi~~Ai~~~a~~~~~~~~~~~v~~~~~~~--g~gv~~~v---~g--~~~~iG~ 189 (473)
+..+.++.+.++++-.++.. .....|.+++|++....+..-.....+..+|..+. .+.+..++ +| +.+.+|.
T Consensus 350 ~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGA 429 (942)
T KOG0205|consen 350 IEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGA 429 (942)
T ss_pred ceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCC
Confidence 65555778888887665444 34456899999998765421111011112222221 12222222 33 4567799
Q ss_pred ccccCCCCCC-------cchhHHHHhcCCceeeEeeeCC-------------eEEEEEEecCccCCchHHHHHHHHhCCC
Q 038599 190 RRIGPRTGCS-------KDSIAEAKCTGGKTRGYVYLGA-------------TPVGTFSLSDSCRSGALEAIKDLKSLGI 249 (473)
Q Consensus 190 ~~~~~~~~~~-------~~~~~~~~~~~G~~vi~va~d~-------------~~lG~i~l~d~lr~~a~~~I~~L~~~gi 249 (473)
|+++.+.+.. ..+.+++++++|+|-+.+++.- .|+|++-+.||+|.+..++|++-.+.|+
T Consensus 430 Peqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv 509 (942)
T KOG0205|consen 430 PEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGV 509 (942)
T ss_pred hHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccc
Confidence 9876332221 1233688999999999988532 6999999999999999999999999999
Q ss_pred eEEEEcCCCHHHHHHHHHHcCCCcc----------------------------ceehccChhhHHHHHHHHhhCC-cEEE
Q 038599 250 KSFILAGDSHAAALYAQDQLDHAFD----------------------------MVYAELLPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 250 ~v~mlTGD~~~~a~~~a~~~gi~~~----------------------------~v~a~~~P~~K~~~v~~l~~~g-~v~m 300 (473)
+|.|+|||....+...++++|+... .=|+.+.|++|.++|+.||++| .++|
T Consensus 510 ~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gm 589 (942)
T KOG0205|consen 510 NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGM 589 (942)
T ss_pred eeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecc
Confidence 9999999999999999999998643 3478888999999999999999 8999
Q ss_pred EcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038599 301 VGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGY 380 (473)
Q Consensus 301 vGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~ 380 (473)
.|||.||+|||+.||+||++. .+++.++.++|+|++.+.++.+..++..+|.++++++.+..++++..+-++ +.++-+
T Consensus 590 tgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv-~gfml~ 667 (942)
T KOG0205|consen 590 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV-FGFMLI 667 (942)
T ss_pred cCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH-HHHHHH
Confidence 999999999999999999997 889999999999999999999999999999999999999888777655433 333333
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 038599 381 PLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 381 ~~~~~a~l~~~~s~l~v~~n 400 (473)
...|-..+......++.++|
T Consensus 668 alIw~~df~pfmvliiailn 687 (942)
T KOG0205|consen 668 ALIWEFDFSPFMVLIIAILN 687 (942)
T ss_pred HHHHHhcCCHHHHHHHHHhc
Confidence 34454444333344555555
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=323.02 Aligned_cols=343 Identities=19% Similarity=0.208 Sum_probs=245.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcchhH-------H---HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 038599 7 WPAPSVMASGLLLALSFLGYIYHPLQ-------S---LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFS 76 (473)
Q Consensus 7 ~~~~~~i~~~i~~~~~~~~~~~~~~~-------~---~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~ 76 (473)
|-+.+.|...++|.+....|.|.... + +-...++..++|+-||+..++ |+..++.
T Consensus 394 ~Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSm---------------AVNsSL~ 458 (1160)
T KOG0209|consen 394 RETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSM---------------AVNSSLI 458 (1160)
T ss_pred HHHHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhH---------------HHHHHHH
Confidence 44455555545555555555543221 1 222233445566678887776 8999999
Q ss_pred HHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCC---------CHHHH--HHHHHhh---h-ccC
Q 038599 77 KAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDV---------SLGTL--LYWVSSI---E-SKS 141 (473)
Q Consensus 77 ~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~---------~~~~l--l~~~a~~---e-~~s 141 (473)
.|+|.||+|..|-+|.-+|++|+.|||||||||++.|.|.++...+.+. ..+.+ +.-++++ | .-.
T Consensus 459 ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lV 538 (1160)
T KOG0209|consen 459 ALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLV 538 (1160)
T ss_pred HHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCccc
Confidence 9999999999999999999999999999999999999999987643322 11222 2223333 3 356
Q ss_pred CChHHHHHHHHHHHcC-----CCCCCCCcccccccc---------CCceeEEecC-------eEEEEccccccCC----C
Q 038599 142 SHPMAAALVDYARSLA-----IEPVPENVEDFQNFP---------GEGIFGKIHG-------NVIYIGNRRIGPR----T 196 (473)
Q Consensus 142 ~hpi~~Ai~~~a~~~~-----~~~~~~~v~~~~~~~---------g~gv~~~v~g-------~~~~iG~~~~~~~----~ 196 (473)
+||+++|.++.....- ..+........+.+. ...+.+..++ -.-.+|+|+.+.+ .
T Consensus 539 GDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dv 618 (1160)
T KOG0209|consen 539 GDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDV 618 (1160)
T ss_pred CChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhC
Confidence 8999999999864321 111111101111110 0011111111 1233588876533 3
Q ss_pred CCCcchhHHHHhcCCceeeEeee---------------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEc
Q 038599 197 GCSKDSIAEAKCTGGKTRGYVYL---------------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILA 255 (473)
Q Consensus 197 ~~~~~~~~~~~~~~G~~vi~va~---------------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlT 255 (473)
..++++...++..+|.||+++++ |++|.|++.|.-|+|+|++++|++|++.+++++|+|
T Consensus 619 P~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMIT 698 (1160)
T KOG0209|consen 619 PKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMIT 698 (1160)
T ss_pred chhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEe
Confidence 33445557889999999998862 679999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCcc-------------------------------------------------------------
Q 038599 256 GDSHAAALYAQDQLDHAFD------------------------------------------------------------- 274 (473)
Q Consensus 256 GD~~~~a~~~a~~~gi~~~------------------------------------------------------------- 274 (473)
|||+.||.++|+++||...
T Consensus 699 GDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~ 778 (1160)
T KOG0209|consen 699 GDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLR 778 (1160)
T ss_pred CCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHH
Confidence 9999999999999998652
Q ss_pred ------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCc---------------------
Q 038599 275 ------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSA--------------------- 326 (473)
Q Consensus 275 ------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~--------------------- 326 (473)
.||||+.|.||..+|..|++.| .++|||||.||+.|||+||||||+-.+..+
T Consensus 779 ~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~ 858 (1160)
T KOG0209|consen 779 RLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQT 858 (1160)
T ss_pred HhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhH
Confidence 6899999999999999999999 899999999999999999999997412110
Q ss_pred -------------------------------------------------cccccccEEEecCCcccHHHHHHHHHHHHHH
Q 038599 327 -------------------------------------------------LAMESGHVILMSNDIRKIPKAIKLARKASTK 357 (473)
Q Consensus 327 -------------------------------------------------~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~ 357 (473)
.|.-+|.+.....+++.+-++|+.||.+.-+
T Consensus 859 ~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVt 938 (1160)
T KOG0209|consen 859 IAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVT 938 (1160)
T ss_pred HHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHH
Confidence 1122345555556788999999999999988
Q ss_pred HHHHHHH
Q 038599 358 LIQNVTL 364 (473)
Q Consensus 358 i~~n~~~ 364 (473)
..|.+.+
T Consensus 939 TlQMfKI 945 (1160)
T KOG0209|consen 939 TLQMFKI 945 (1160)
T ss_pred HHHHHHH
Confidence 8887754
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=334.74 Aligned_cols=289 Identities=19% Similarity=0.218 Sum_probs=219.0
Q ss_pred ceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCC-------------------------------------
Q 038599 83 LLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDV------------------------------------- 125 (473)
Q Consensus 83 ilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~------------------------------------- 125 (473)
+.+|+.+..|+||+|++|+.|||||||+|+|++.++...+..+
T Consensus 439 ~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1178)
T PLN03190 439 FQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLE 518 (1178)
T ss_pred ceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHh
Confidence 7899999999999999999999999999999999975421000
Q ss_pred ------C-H-----HHHHH---HHHhh-----h-----------ccCCChHHHHHHHHHHHcCCCC------------C-
Q 038599 126 ------S-L-----GTLLY---WVSSI-----E-----------SKSSHPMAAALVDYARSLAIEP------------V- 161 (473)
Q Consensus 126 ------~-~-----~~ll~---~~a~~-----e-----------~~s~hpi~~Ai~~~a~~~~~~~------------~- 161 (473)
+ . .+.+. +.+.+ + ..+.+|.+.|++.++...|+.. .
T Consensus 519 ~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~ 598 (1178)
T PLN03190 519 LSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHG 598 (1178)
T ss_pred hhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeecc
Confidence 0 0 01111 11111 1 1234899999999999888621 0
Q ss_pred -CCC-----ccccccccCCceeEEec---C--eEEEEccccccCCCCCC---------cchhHHHHhcCCceeeEee---
Q 038599 162 -PEN-----VEDFQNFPGEGIFGKIH---G--NVIYIGNRRIGPRTGCS---------KDSIAEAKCTGGKTRGYVY--- 218 (473)
Q Consensus 162 -~~~-----v~~~~~~~g~gv~~~v~---g--~~~~iG~~~~~~~~~~~---------~~~~~~~~~~~G~~vi~va--- 218 (473)
... +.+|... .+.++..++ + ..+.+|+++.+.+.... ....+++++++|+|++.++
T Consensus 599 ~~~~~~il~~~pF~S~-rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~ 677 (1178)
T PLN03190 599 ERQRFNVLGLHEFDSD-RKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRE 677 (1178)
T ss_pred ceecceeEEEeccccc-ccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEe
Confidence 000 1122221 123333332 2 24667998876443321 1233678899999998764
Q ss_pred -----------------------------------eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 038599 219 -----------------------------------LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAAL 263 (473)
Q Consensus 219 -----------------------------------~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~ 263 (473)
.|++++|+++++|++|++++++|++|+++|++++|+|||+..||.
T Consensus 678 l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi 757 (1178)
T PLN03190 678 LNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAI 757 (1178)
T ss_pred CCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence 367899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcc---------------------------------------------------------------------
Q 038599 264 YAQDQLDHAFD--------------------------------------------------------------------- 274 (473)
Q Consensus 264 ~~a~~~gi~~~--------------------------------------------------------------------- 274 (473)
++|+++|+..+
T Consensus 758 ~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~ 837 (1178)
T PLN03190 758 SIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEE 837 (1178)
T ss_pred HHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHH
Confidence 99986665100
Q ss_pred -----------ceehccChhhHHHHHHHHhhC-C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCc--cccccccEEEecC
Q 038599 275 -----------MVYAELLPQHKEELVELLKKD-G-ATAMVGDGINDAPALAAVDIGISMGISGSA--LAMESGHVILMSN 339 (473)
Q Consensus 275 -----------~v~a~~~P~~K~~~v~~l~~~-g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~--~a~~~ad~vl~~~ 339 (473)
.+++|++|+||+++|+.+|+. + .|+|+|||.||++||++|||||++ +|.+ .|..+||+.+ .
T Consensus 838 ~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGI--sG~EG~qA~~aSDfaI--~ 913 (1178)
T PLN03190 838 QLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMASDFAM--G 913 (1178)
T ss_pred HHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeee--cCchhHHHHHhhccch--h
Confidence 268999999999999999987 4 799999999999999999999976 5666 7788999999 8
Q ss_pred CcccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 340 DIRKIPKAIK-LARKASTKLIQNVTLSVTVKGAVLVLA 376 (473)
Q Consensus 340 ~l~~l~~~i~-~~r~~~~~i~~n~~~~~~~n~~~~~la 376 (473)
.|..+.+++- .||..++++...+.|.+--|++..+.-
T Consensus 914 ~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~q 951 (1178)
T PLN03190 914 QFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVL 951 (1178)
T ss_pred hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999775 999999999999999888888655443
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-32 Score=259.75 Aligned_cols=207 Identities=33% Similarity=0.496 Sum_probs=176.6
Q ss_pred ccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCCCCCCccccccccCCce
Q 038599 97 VKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGI 176 (473)
Q Consensus 97 vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~~~~~v~~~~~~~g~gv 176 (473)
||+||||||||||++++.+ .. .....++.++...+..+.||++.++..+.......+ . +.++..+++.|+
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~----~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~ 70 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP----PSNEAALAIAAALEQGSEHPIGKAIVEFAKNHQWSK--S-LESFSEFIGRGI 70 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES----CSHHHHHHHHHHHHCTSTSHHHHHHHHHHHHHHHHS--C-CEEEEEETTTEE
T ss_pred CeEEEEecCCCcccCeEEE---Ee----ccHHHHHHHHHHhhhcCCCcchhhhhhhhhhccchh--h-hhhheeeeeccc
Confidence 6899999999999999999 11 567888999999999999999999999987632221 1 778889999999
Q ss_pred eEEecCeEEEEccccccCCCCCCcc---hhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEE
Q 038599 177 FGKIHGNVIYIGNRRIGPRTGCSKD---SIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFI 253 (473)
Q Consensus 177 ~~~v~g~~~~iG~~~~~~~~~~~~~---~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~m 253 (473)
.+.+++. +. |+++++.+...... ........++.+.++++.+..++|.+.+.|++||+++++|++|+++|++++|
T Consensus 71 ~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i 148 (215)
T PF00702_consen 71 SGDVDGI-YL-GSPEWIHELGIRVISPDLVEEIQESQGRTVIVLAVNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAI 148 (215)
T ss_dssp EEEEHCH-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEE
T ss_pred ccccccc-cc-ccchhhhhccccccccchhhhHHHhhCCcccceeecCeEEEEEeecCcchhhhhhhhhhhhccCcceee
Confidence 9998887 55 88887655443321 1122335566677888889999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCccceehcc--ChhhH--HHHHHHHhhCC-cEEEEcCCcccHHHHHHCC
Q 038599 254 LAGDSHAAALYAQDQLDHAFDMVYAEL--LPQHK--EELVELLKKDG-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 254 lTGD~~~~a~~~a~~~gi~~~~v~a~~--~P~~K--~~~v~~l~~~g-~v~mvGDG~ND~~al~~Ad 315 (473)
+|||+..++.++++++||....++++. +|++| .++++.||.++ .|+|||||.||++|+++||
T Consensus 149 ~TGD~~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 149 LTGDNESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EESSEHHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred eeccccccccccccccccccccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 999999999999999999855699999 99999 99999999665 9999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=243.10 Aligned_cols=282 Identities=20% Similarity=0.255 Sum_probs=198.0
Q ss_pred CCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCH---HHHHHHHHhhhc-----------cCCChHH
Q 038599 81 TGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSL---GTLLYWVSSIES-----------KSSHPMA 146 (473)
Q Consensus 81 ~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~---~~ll~~~a~~e~-----------~s~hpi~ 146 (473)
.|.++|+...-|+||++..+..|||||||+|+|++++++-..-.++. +++-+...++.. ...||..
T Consensus 391 pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s 470 (1051)
T KOG0210|consen 391 PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMS 470 (1051)
T ss_pred CceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCccc
Confidence 48899999999999999999999999999999999999865333332 233333333321 0113332
Q ss_pred H----HHHHHHHHcCCCCCCCC---------------------------------------------------ccccccc
Q 038599 147 A----ALVDYARSLAIEPVPEN---------------------------------------------------VEDFQNF 171 (473)
Q Consensus 147 ~----Ai~~~a~~~~~~~~~~~---------------------------------------------------v~~~~~~ 171 (473)
. ++...+--.++.|..+. +.+|+..
T Consensus 471 ~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsE 550 (1051)
T KOG0210|consen 471 ARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSE 550 (1051)
T ss_pred HHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccc
Confidence 2 22222222222221111 0001100
Q ss_pred -cCCceeEEec--Ce--EEEEccccccCC----CCCCcchhHHHHhcCCceeeEee------------------------
Q 038599 172 -PGEGIFGKIH--GN--VIYIGNRRIGPR----TGCSKDSIAEAKCTGGKTRGYVY------------------------ 218 (473)
Q Consensus 172 -~g~gv~~~v~--g~--~~~iG~~~~~~~----~~~~~~~~~~~~~~~G~~vi~va------------------------ 218 (473)
...|+..+-+ ++ .+.+|+.-.|.. +.+ .+++..+++.+|.|++.++
T Consensus 551 tKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~NdW-leEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~ 629 (1051)
T KOG0210|consen 551 TKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYNDW-LEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSIS 629 (1051)
T ss_pred cceeeEEEecCCCceEEEEEecchHHHhcccccchh-hhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccc
Confidence 0112222211 21 234455433221 111 1333567788999988875
Q ss_pred ---------------eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---------
Q 038599 219 ---------------LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--------- 274 (473)
Q Consensus 219 ---------------~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--------- 274 (473)
+|+.++|+-+.+|.+.++++.+++.||++|+++||+|||..+||.-+|+..++...
T Consensus 630 dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~ 709 (1051)
T KOG0210|consen 630 DRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRS 709 (1051)
T ss_pred hHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEe
Confidence 36789999999999999999999999999999999999999999999998887652
Q ss_pred -------------------------------------------------ceehccChhhHHHHHHHHhhC-C-cEEEEcC
Q 038599 275 -------------------------------------------------MVYAELLPQHKEELVELLKKD-G-ATAMVGD 303 (473)
Q Consensus 275 -------------------------------------------------~v~a~~~P~~K~~~v~~l~~~-g-~v~mvGD 303 (473)
.+.+|++|+||+++++.+|++ | .|+.+||
T Consensus 710 v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGD 789 (1051)
T KOG0210|consen 710 VTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGD 789 (1051)
T ss_pred cCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcC
Confidence 688999999999999999988 5 8999999
Q ss_pred CcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH-HHHHHHHHHHHHHHHH
Q 038599 304 GINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK-LARKASTKLIQNVTLS 365 (473)
Q Consensus 304 G~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~-~~r~~~~~i~~n~~~~ 365 (473)
|-||+.|+++||+||..-......|.-+||+.+ ..|+.+.+++- .||..+++.-+--.|.
T Consensus 790 GGNDVsMIq~A~~GiGI~gkEGkQASLAADfSI--tqF~Hv~rLLl~HGR~SYkrsa~laqfV 850 (1051)
T KOG0210|consen 790 GGNDVSMIQAADVGIGIVGKEGKQASLAADFSI--TQFSHVSRLLLWHGRNSYKRSAKLAQFV 850 (1051)
T ss_pred CCccchheeecccceeeecccccccchhccccH--HHHHHHHHHhhccccchHHHHHHHHHHH
Confidence 999999999999999974455566778999999 67999988664 6788887765554443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=234.31 Aligned_cols=294 Identities=19% Similarity=0.229 Sum_probs=211.3
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCC----C-----------------------------
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDV----S----------------------------- 126 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~----~----------------------------- 126 (473)
.....+|..+--|.||+|++|..|||||||+|.|++.+....+..+ +
T Consensus 370 d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 449 (1151)
T KOG0206|consen 370 DTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRL 449 (1151)
T ss_pred CCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchh
Confidence 3567889999999999999999999999999999998864332110 0
Q ss_pred -------------HHHH---HHHHHh-----------hhccCCChHHHHHHHHHHHcCCCCCCCCccccc----------
Q 038599 127 -------------LGTL---LYWVSS-----------IESKSSHPMAAALVDYARSLAIEPVPENVEDFQ---------- 169 (473)
Q Consensus 127 -------------~~~l---l~~~a~-----------~e~~s~hpi~~Ai~~~a~~~~~~~~~~~v~~~~---------- 169 (473)
..+. +.+.+. +......|.+.|++..+++.|+...........
T Consensus 450 ~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y 529 (1151)
T KOG0206|consen 450 VDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETY 529 (1151)
T ss_pred hccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeE
Confidence 0011 111111 122346899999999999988653111110000
Q ss_pred ------cc--cCCceeEEec---Ce--EEEEccccccCCCCC----Ccc----hhHHHHhcCCceeeEee----------
Q 038599 170 ------NF--PGEGIFGKIH---GN--VIYIGNRRIGPRTGC----SKD----SIAEAKCTGGKTRGYVY---------- 218 (473)
Q Consensus 170 ------~~--~g~gv~~~v~---g~--~~~iG~~~~~~~~~~----~~~----~~~~~~~~~G~~vi~va---------- 218 (473)
++ ..+.++..+. |+ .+.+|+...+-+.-. ... .-+++++.+|.|.++++
T Consensus 530 ~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~ 609 (1151)
T KOG0206|consen 530 ELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYE 609 (1151)
T ss_pred EEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHH
Confidence 00 0122333331 21 345566544322111 111 12678899999998875
Q ss_pred ----------------------------eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 038599 219 ----------------------------LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLD 270 (473)
Q Consensus 219 ----------------------------~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~g 270 (473)
.|++++|.-+++|++.++++|+|+.|+++||++||+|||..+||..++-.|+
T Consensus 610 ~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~ 689 (1151)
T KOG0206|consen 610 EWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCR 689 (1151)
T ss_pred HHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhc
Confidence 3789999999999999999999999999999999999999999999998877
Q ss_pred CCcc----------------------------------------------------------------------------
Q 038599 271 HAFD---------------------------------------------------------------------------- 274 (473)
Q Consensus 271 i~~~---------------------------------------------------------------------------- 274 (473)
+..+
T Consensus 690 Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C 769 (1151)
T KOG0206|consen 690 LLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRC 769 (1151)
T ss_pred CCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhc
Confidence 6431
Q ss_pred --ceehccChhhHHHHHHHHhhC-C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHH-H
Q 038599 275 --MVYAELLPQHKEELVELLKKD-G-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAI-K 349 (473)
Q Consensus 275 --~v~a~~~P~~K~~~v~~l~~~-g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i-~ 349 (473)
.+..|++|-||+.+|+..++. + .++.+|||.||.+|++.|||||.++..+.-.|..++|+-+ .-|.-+..++ -
T Consensus 770 ~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AI--aqFrfL~rLLLV 847 (1151)
T KOG0206|consen 770 KSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAI--AQFRFLERLLLV 847 (1151)
T ss_pred CEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchH--HHHHHHhhhhee
Confidence 678899999999999999754 5 8999999999999999999999985455556777889887 4566666543 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 350 LARKASTKLIQNVTLSVTVKGAVLVL 375 (473)
Q Consensus 350 ~~r~~~~~i~~n~~~~~~~n~~~~~l 375 (473)
.||=.+.++.+.+.+.+-.|+...+.
T Consensus 848 HGhW~Y~R~a~~ilyfFYKNi~f~~~ 873 (1151)
T KOG0206|consen 848 HGHWSYIRLAKMILYFFYKNIAFTFT 873 (1151)
T ss_pred ecceeHHHHHHHHHHHHHHHHHHHHH
Confidence 67778888888888888777755443
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.3e-17 Score=134.98 Aligned_cols=125 Identities=24% Similarity=0.344 Sum_probs=109.5
Q ss_pred CeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEE
Q 038599 221 ATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATA 299 (473)
Q Consensus 221 ~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~ 299 (473)
+...+.+.-.-.+-+++.+.|++|++. +++++.|||...+....|+-+||+.+.+++...|+.|.++++.|++.+ +|.
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~v 97 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVV 97 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEEE
Confidence 456677777888899999999999999 999999999999999999999999999999999999999999999887 999
Q ss_pred EEcCCcccHHHHHHCCeeEEeCCC--CCccccccccEEEecCCcccHHHHH
Q 038599 300 MVGDGINDAPALAAVDIGISMGIS--GSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 300 mvGDG~ND~~al~~AdvgIa~g~~--~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
|||||.||.+||++||+||..-.. ..+-+.++||+++ .++..+.++.
T Consensus 98 mVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvi--k~i~e~ldl~ 146 (152)
T COG4087 98 MVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL--KEIAEILDLL 146 (152)
T ss_pred EecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhh--hhHHHHHHHh
Confidence 999999999999999999985322 2345568999998 6666665544
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.2e-11 Score=112.09 Aligned_cols=115 Identities=17% Similarity=0.107 Sum_probs=99.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceeh--------c-------cChhhHHHHHHHHhhCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA--------E-------LLPQHKEELVELLKKDG 296 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a--------~-------~~P~~K~~~v~~l~~~g 296 (473)
+++|++.+.|+.+|+.+ ++.++||-....+..+++++|++ .+++ + ..+++|...++.+++.|
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~--~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~ 144 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 144 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc--hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC
Confidence 57999999999999975 99999999999999999999997 5554 1 34679999999998888
Q ss_pred -cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~ 351 (473)
.+.|+|||.||.++++.||+|+++ .+.+..+++||-.-.-.+.+.+...+.++
T Consensus 145 ~~~v~vGDs~nDl~ml~~Ag~~ia~--~ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 145 YRVIAAGDSYNDTTMLSEAHAGILF--HAPENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CCEEEEeCCHHHHHHHHhCCCCEEe--cCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 999999999999999999999999 57777777777666667788888777766
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.9e-10 Score=112.54 Aligned_cols=115 Identities=25% Similarity=0.322 Sum_probs=98.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-----------------cChhhHHHHHHHHhh
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-----------------LLPQHKEELVELLKK 294 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-----------------~~P~~K~~~v~~l~~ 294 (473)
++.|++.+.++.|++.|+++.++||.....+..+.+++|++ .++++ ...+.|.+.++.+.+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld--~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD--AAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC--eEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 57999999999999999999999999988889999999997 43321 134689999988865
Q ss_pred C-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHH
Q 038599 295 D-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 295 ~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
+ | .+.++|||.||.+|++.|++|+++ ++.+..++.||.++...++.++..++..
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~~ 317 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILSG 317 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhcc
Confidence 4 3 699999999999999999999999 6888889999999988899888877653
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.02 E-value=1e-09 Score=104.18 Aligned_cols=112 Identities=25% Similarity=0.362 Sum_probs=93.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-----------------cChhhHHHHHHHHhh
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-----------------LLPQHKEELVELLKK 294 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-----------------~~P~~K~~~v~~l~~ 294 (473)
+++|++.+.++.|++.|+++.++||.....+..+.+++|+. .+++. ..++.|..+++.+.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD--AAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC--ceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 58999999999999999999999999999999999999997 45532 113347777776544
Q ss_pred C-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHH
Q 038599 295 D-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 295 ~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
+ + .+.|+||+.+|.++++.|++++++ .+.+..++.||.++.++++..+..+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~--~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGIAF--NAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeEEe--CCCHHHHHhchhccCCCCHHHHHhh
Confidence 3 2 599999999999999999999999 4677788899999999888777654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.7e-09 Score=94.49 Aligned_cols=96 Identities=16% Similarity=0.203 Sum_probs=81.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHHC
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD----G-ATAMVGDGINDAPALAAV 314 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~A 314 (473)
+|++|+++|+++.++||++...+..+.+++|+. .++... ..|...++.+.++ . .++|+||+.||.++++.|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~--~~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~a 111 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT--HLYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKV 111 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC--EEEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 899999999999999999999999999999997 555543 4566666665432 2 799999999999999999
Q ss_pred CeeEEeCCCCCccccccccEEEecCC
Q 038599 315 DIGISMGISGSALAMESGHVILMSND 340 (473)
Q Consensus 315 dvgIa~g~~~~~~a~~~ad~vl~~~~ 340 (473)
++++++. .+.+..+..+++++..+.
T Consensus 112 g~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 112 GLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred CCeEecC-CcCHHHHHhCCEEecCCC
Confidence 9999997 677788889999996554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=6e-09 Score=99.64 Aligned_cols=132 Identities=18% Similarity=0.194 Sum_probs=103.3
Q ss_pred eeeEeeeCCeEEEEEEecCc-cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------
Q 038599 213 TRGYVYLGATPVGTFSLSDS-CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD----------------- 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~-lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~----------------- 274 (473)
+.++.-.||+++- .|. +.+.+.++|++|++.|+++++.||.+...+..+.+++|+...
T Consensus 4 kli~~DlDGTLl~----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~ 79 (230)
T PRK01158 4 KAIAIDIDGTITD----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKR 79 (230)
T ss_pred eEEEEecCCCcCC----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCE
Confidence 4566667888762 333 678999999999999999999999999999999999998642
Q ss_pred ------------------c------e------------------------------------------ehccChh--hHH
Q 038599 275 ------------------M------V------------------------------------------YAELLPQ--HKE 286 (473)
Q Consensus 275 ------------------~------v------------------------------------------~a~~~P~--~K~ 286 (473)
. . +.+..|. .|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg 159 (230)
T PRK01158 80 IFLGDIEECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKG 159 (230)
T ss_pred EEEcchHHHHHHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChH
Confidence 0 0 0011111 355
Q ss_pred HHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 287 ELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 287 ~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
..++.+.++ | .++++||+.||.+|++.|++|++|+ ++.+..++.||++..+++-.++.++++
T Consensus 160 ~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 160 TGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 666655443 2 6999999999999999999999998 899999999999998888888887765
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.4e-09 Score=102.03 Aligned_cols=133 Identities=20% Similarity=0.244 Sum_probs=101.6
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--c----------------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--D---------------- 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~---------------- 274 (473)
+.++.-.||+++. -...+.+.++++|++|+++|+++++.||.+...+..+.+++|+.. .
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~ 80 (270)
T PRK10513 4 KLIAIDMDGTLLL---PDHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADG 80 (270)
T ss_pred EEEEEecCCcCcC---CCCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCC
Confidence 4556667888864 134588899999999999999999999999999999999999742 1
Q ss_pred ---------------------------------ceeh--------------------------cc-------------Ch
Q 038599 275 ---------------------------------MVYA--------------------------EL-------------LP 282 (473)
Q Consensus 275 ---------------------------------~v~a--------------------------~~-------------~P 282 (473)
.++. .+ .+
T Consensus 81 ~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (270)
T PRK10513 81 ETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEP 160 (270)
T ss_pred CEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCH
Confidence 0000 00 00
Q ss_pred ----------------------------------hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCC
Q 038599 283 ----------------------------------QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGIS 323 (473)
Q Consensus 283 ----------------------------------~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~ 323 (473)
-.|..-++.|.++ | .|+.+||+.||.+||+.|++|++|+ +
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-N 239 (270)
T PRK10513 161 EILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-N 239 (270)
T ss_pred HHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-C
Confidence 1233333333332 3 5899999999999999999999998 9
Q ss_pred CCccccccccEEEecCCcccHHHHHH
Q 038599 324 GSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 324 ~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+.+..++.||+|..+++-.++..+++
T Consensus 240 A~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 240 AIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ccHHHHHhcCeeccCCCcchHHHHHH
Confidence 99999999999998888888887765
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.9e-09 Score=102.07 Aligned_cols=133 Identities=23% Similarity=0.296 Sum_probs=107.8
Q ss_pred eeeEeeeCCeEEEEEEecCc-cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------
Q 038599 213 TRGYVYLGATPVGTFSLSDS-CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD----------------- 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~-lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~----------------- 274 (473)
+.+++-.||+++. .+. +.+.++++|+++++.|+++.++||.+...+..+.+++|+...
T Consensus 4 kli~~DlDGTLl~----~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~ 79 (264)
T COG0561 4 KLLAFDLDGTLLD----SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLF 79 (264)
T ss_pred eEEEEcCCCCccC----CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEe
Confidence 4566667777653 333 899999999999999999999999999999999999999852
Q ss_pred ------------------------cee-----------------------------------------------------
Q 038599 275 ------------------------MVY----------------------------------------------------- 277 (473)
Q Consensus 275 ------------------------~v~----------------------------------------------------- 277 (473)
.++
T Consensus 80 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
T COG0561 80 QKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELV 159 (264)
T ss_pred eecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHH
Confidence 000
Q ss_pred ---------------------hccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccc
Q 038599 278 ---------------------AELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAM 329 (473)
Q Consensus 278 ---------------------a~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~ 329 (473)
-+..| .+|...++.|.++ | .|+.+||+.||.+||+.|+.|++|+ ++.+..+
T Consensus 160 ~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k 238 (264)
T COG0561 160 EALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELK 238 (264)
T ss_pred HHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHH
Confidence 01111 2777777777663 4 4999999999999999999999999 8899999
Q ss_pred ccccEEEecCCcccHHHHHHH
Q 038599 330 ESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 330 ~~ad~vl~~~~l~~l~~~i~~ 350 (473)
+.||++..+++-.++...++.
T Consensus 239 ~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 239 ELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred hhCCcccCCccchHHHHHHHH
Confidence 999988888888888887764
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.7e-09 Score=99.58 Aligned_cols=130 Identities=17% Similarity=0.141 Sum_probs=103.5
Q ss_pred eeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------------
Q 038599 214 RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------- 274 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------- 274 (473)
.++.-.||+++. =...+.+++.++|++|++.|++++++||.+...+..+.+++++...
T Consensus 3 ~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~ 79 (215)
T TIGR01487 3 LVAIDIDGTLTE---PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLA 79 (215)
T ss_pred EEEEecCCCcCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEe
Confidence 455667888763 2234888999999999999999999999999999999999998732
Q ss_pred ----------------------------------------------------c----eehccC--hhhHHHHHHHHhhC-
Q 038599 275 ----------------------------------------------------M----VYAELL--PQHKEELVELLKKD- 295 (473)
Q Consensus 275 ----------------------------------------------------~----v~a~~~--P~~K~~~v~~l~~~- 295 (473)
. .+.+.. ..+|...++.+.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~ 159 (215)
T TIGR01487 80 NMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELL 159 (215)
T ss_pred cccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHh
Confidence 0 011111 24788888877654
Q ss_pred C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHH
Q 038599 296 G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 296 g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
| .++++||+.||.+|++.|++|++|+ ++.+..++.||++..+++-.++.++
T Consensus 160 ~i~~~~~i~iGDs~ND~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 160 GIKPEEVAAIGDSENDIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred CCCHHHEEEECCCHHHHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 3 5999999999999999999999998 8999999999999977776666654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=5e-09 Score=97.03 Aligned_cols=139 Identities=14% Similarity=0.175 Sum_probs=100.9
Q ss_pred CCceeeEeeeCCeEEE-EEEe-c--CccCCchH---HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccCh
Q 038599 210 GGKTRGYVYLGATPVG-TFSL-S--DSCRSGAL---EAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLP 282 (473)
Q Consensus 210 ~G~~vi~va~d~~~lG-~i~l-~--d~lr~~a~---~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P 282 (473)
++.+.+.+-.|++++. -+.+ . .++++... .+|+.|+++|+++.++||.+...+..+++++|+. .+|.. .
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~--~~f~g--~ 94 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT--HLYQG--Q 94 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc--eeecC--C
Confidence 4567777778888763 1111 1 11222222 6899999999999999999999999999999997 66654 3
Q ss_pred hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCC----cccHHHHHHHHHH
Q 038599 283 QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSND----IRKIPKAIKLARK 353 (473)
Q Consensus 283 ~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~----l~~l~~~i~~~r~ 353 (473)
++|...++.+.++ | .++||||+.||.++++.|+++++++ .+.+..+..+|+++..+. +..+.+.+...|-
T Consensus 95 ~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 95 SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 5677776665433 3 6999999999999999999999986 667777788999985332 4445555544443
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-08 Score=93.02 Aligned_cols=101 Identities=15% Similarity=0.205 Sum_probs=82.4
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC--hhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCC
Q 038599 239 EAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL--PQHKEELVELLKKDG-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 239 ~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~--P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Ad 315 (473)
.+|+.|++.|+++.++|+.+...+....+.+|+. .+|.... |+....+++.++-.. .++|+||+.||.++++.|+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~--~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag 118 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK--RFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVG 118 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc--EEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCC
Confidence 5899999999999999999999999999999998 6665553 333344444443333 7999999999999999999
Q ss_pred eeEEeCCCCCccccccccEEEecCCcc
Q 038599 316 IGISMGISGSALAMESGHVILMSNDIR 342 (473)
Q Consensus 316 vgIa~g~~~~~~a~~~ad~vl~~~~l~ 342 (473)
++++|+ ++.+..+..|++|+..++=.
T Consensus 119 ~~~am~-nA~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 119 LAVAVG-DAVADVKEAAAYVTTARGGH 144 (169)
T ss_pred CeEECc-CchHHHHHhCCEEcCCCCCC
Confidence 999997 88888999999998655433
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-08 Score=100.51 Aligned_cols=133 Identities=16% Similarity=0.140 Sum_probs=101.5
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------ 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------ 274 (473)
+.++.-.||+++. -...+.+.++++|++|+++|+++++.||.+...+..+.+++|+...
T Consensus 3 kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~ 79 (272)
T PRK15126 3 RLAAFDMDGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLH 79 (272)
T ss_pred cEEEEeCCCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEE
Confidence 3455667888763 2335888999999999999999999999999999999999998632
Q ss_pred -----------------------------ce-------------------------------------------------
Q 038599 275 -----------------------------MV------------------------------------------------- 276 (473)
Q Consensus 275 -----------------------------~v------------------------------------------------- 276 (473)
.+
T Consensus 80 ~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~ 159 (272)
T PRK15126 80 RQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQ 159 (272)
T ss_pred eecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHH
Confidence 00
Q ss_pred -------------------ehccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccc
Q 038599 277 -------------------YAELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAME 330 (473)
Q Consensus 277 -------------------~a~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~ 330 (473)
+-+..| -.|..-++.|.++ | .|+.+||+.||.+||+.|+.|++|+ ++.+..++
T Consensus 160 ~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~ 238 (272)
T PRK15126 160 IQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRA 238 (272)
T ss_pred HHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHH
Confidence 000011 1455555555443 3 5999999999999999999999999 99999999
Q ss_pred cccE--EEecCCcccHHHHHH
Q 038599 331 SGHV--ILMSNDIRKIPKAIK 349 (473)
Q Consensus 331 ~ad~--vl~~~~l~~l~~~i~ 349 (473)
.||. ++.+++-.++..+++
T Consensus 239 ~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 239 ELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred hCCCCeecCCCcchHHHHHHH
Confidence 9986 666777777777664
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.6e-08 Score=99.04 Aligned_cols=133 Identities=23% Similarity=0.243 Sum_probs=99.7
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------ 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------ 274 (473)
+.+++-.||+++- -...+.+.+.++|++++++|+++++.||.+...+..+.+++|+...
T Consensus 3 kli~~DlDGTLl~---~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~ 79 (266)
T PRK10976 3 QVVASDLDGTLLS---PDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIF 79 (266)
T ss_pred eEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEeh
Confidence 3556667888763 1334788999999999999999999999999999999999998632
Q ss_pred ------------------------------ceeh----------------------------------------------
Q 038599 275 ------------------------------MVYA---------------------------------------------- 278 (473)
Q Consensus 275 ------------------------------~v~a---------------------------------------------- 278 (473)
.++.
T Consensus 80 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~ 159 (266)
T PRK10976 80 SHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLP 159 (266)
T ss_pred hhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHH
Confidence 0000
Q ss_pred -----------------------ccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccc
Q 038599 279 -----------------------ELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALA 328 (473)
Q Consensus 279 -----------------------~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a 328 (473)
+..| ..|..-++.|.++ | .|+.+||+.||.+||+.|+.|++|+ ++.+..
T Consensus 160 ~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~v 238 (266)
T PRK10976 160 LEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRL 238 (266)
T ss_pred HHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHH
Confidence 0000 1344444444333 3 5999999999999999999999999 999999
Q ss_pred ccccc--EEEecCCcccHHHHHH
Q 038599 329 MESGH--VILMSNDIRKIPKAIK 349 (473)
Q Consensus 329 ~~~ad--~vl~~~~l~~l~~~i~ 349 (473)
++.|| .|+.+++-.++..+++
T Consensus 239 K~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 239 KDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred HHhCCCCeecccCchHHHHHHHH
Confidence 99987 6776777777777664
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=8e-09 Score=97.82 Aligned_cols=104 Identities=23% Similarity=0.245 Sum_probs=84.5
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--------------ceehc-cChhhHHHHHHHHhhC
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--------------MVYAE-LLPQHKEELVELLKKD 295 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--------------~v~a~-~~P~~K~~~v~~l~~~ 295 (473)
.+++|++.+.++.++++|++++++||-...-+..+++++|++.. .+... +..+.|...++.+.++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999842 11111 2247899999777654
Q ss_pred -C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEE
Q 038599 296 -G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVIL 336 (473)
Q Consensus 296 -g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl 336 (473)
| .+.++|||.||.|+|+.|+.+++.+ ..+..+..|+...
T Consensus 156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~ 199 (212)
T COG0560 156 LGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI 199 (212)
T ss_pred cCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence 4 4999999999999999999999994 5544555555544
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.1e-08 Score=94.06 Aligned_cols=112 Identities=23% Similarity=0.256 Sum_probs=87.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc---------------cChhhHHHHHHHHhhCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE---------------LLPQHKEELVELLKKDG 296 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~---------------~~P~~K~~~v~~l~~~g 296 (473)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+. .+++. ..|+.|...++.++..+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~ 144 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWP--TLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG 144 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCc--hhhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence 4589999999999999 999999999999999999999986 33321 24788989999888777
Q ss_pred -cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccE-EEecCCcccHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHV-ILMSNDIRKIPKAIK 349 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~-vl~~~~l~~l~~~i~ 349 (473)
.+.|+||+.||.++.++|++|+..+ ...+.....++. ++ +++..+...++
T Consensus 145 ~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 145 YRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 8999999999999999999999886 333333334454 44 56666655443
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=5.6e-08 Score=95.29 Aligned_cols=133 Identities=20% Similarity=0.246 Sum_probs=99.7
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------ 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------ 274 (473)
+.++.-.||+++. =...+.+.+.++|++++++|+++++.||.+...+..+.+++|+...
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l 80 (272)
T PRK10530 4 RVIALDLDGTLLT---PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVL 80 (272)
T ss_pred cEEEEeCCCceEC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEE
Confidence 4566677888862 2234788999999999999999999999999999999999988642
Q ss_pred ------------------------------cee-hc--------------c-----------------------------
Q 038599 275 ------------------------------MVY-AE--------------L----------------------------- 280 (473)
Q Consensus 275 ------------------------------~v~-a~--------------~----------------------------- 280 (473)
.++ .. .
T Consensus 81 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 160 (272)
T PRK10530 81 EADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFAL 160 (272)
T ss_pred EecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEE
Confidence 000 00 0
Q ss_pred -Ch----------------------------------hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 281 -LP----------------------------------QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 281 -~P----------------------------------~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
.+ .+|...++.+.++ | .++++||+.||.+|++.|++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam 240 (272)
T PRK10530 161 THEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM 240 (272)
T ss_pred ecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe
Confidence 00 0122222222221 3 599999999999999999999999
Q ss_pred CCCCCccccccccEEEecCCcccHHHHHH
Q 038599 321 GISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 321 g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
| ++.+..++.||.++.+++-.++..+++
T Consensus 241 g-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 241 G-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred c-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 9 778888999999998888888888775
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.6e-08 Score=94.87 Aligned_cols=127 Identities=22% Similarity=0.257 Sum_probs=98.6
Q ss_pred eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------------
Q 038599 219 LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------------ 274 (473)
Q Consensus 219 ~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------------ 274 (473)
.|++++- -...+.+.+.++|+++++.|++++++||.+...+..+.+++|+...
T Consensus 5 lDGTLl~---~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~ 81 (225)
T TIGR01482 5 IDGTLTD---PNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLE 81 (225)
T ss_pred ccCccCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccC
Confidence 4666642 1224778899999999999999999999999999999999986431
Q ss_pred -------------------------------------------------ce-------ehccCh--hhHHHHHHHHhhC-
Q 038599 275 -------------------------------------------------MV-------YAELLP--QHKEELVELLKKD- 295 (473)
Q Consensus 275 -------------------------------------------------~v-------~a~~~P--~~K~~~v~~l~~~- 295 (473)
.+ +.+..| .+|...++.+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~ 161 (225)
T TIGR01482 82 EEWFLDIVIAKTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKL 161 (225)
T ss_pred HHHHHHHHHhcccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHh
Confidence 00 001112 3777777777554
Q ss_pred C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCccc----HHHHHH
Q 038599 296 G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRK----IPKAIK 349 (473)
Q Consensus 296 g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~----l~~~i~ 349 (473)
| .++++||+.||.+|++.|++|++|+ ++.+..++.||.|..+++-.+ +...++
T Consensus 162 ~i~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 162 GIKPGETLVCGDSENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred CCCHHHEEEECCCHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 3 6999999999999999999999998 899999999999998777777 555543
|
catalyze the same reaction as SPP. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.78 E-value=3e-08 Score=86.90 Aligned_cols=114 Identities=22% Similarity=0.299 Sum_probs=95.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHH
Q 038599 239 EAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD-G----ATAMVGDGINDAPALAA 313 (473)
Q Consensus 239 ~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~ 313 (473)
-.|+.|.+.|+++.++||.+...++.-++++||. .+|-.. ++|....+.|.++ + .|+++||..||.|+|+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~--~~~qG~--~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK--HLYQGI--SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc--eeeech--HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 5789999999999999999999999999999998 777654 5899888887755 2 79999999999999999
Q ss_pred CCeeEEeCCCCCccccccccEEEecCC----cccHHHHHHHHHHHHHH
Q 038599 314 VDIGISMGISGSALAMESGHVILMSND----IRKIPKAIKLARKASTK 357 (473)
Q Consensus 314 AdvgIa~g~~~~~~a~~~ad~vl~~~~----l~~l~~~i~~~r~~~~~ 357 (473)
.++++++. .+.+..++.+|+|+.... ++.+.+++..++..+..
T Consensus 118 vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 118 VGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred cCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 99999996 788888899999997654 55566666666655443
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.3e-08 Score=92.06 Aligned_cols=91 Identities=27% Similarity=0.411 Sum_probs=79.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC-------------------hhhHHHHHHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL-------------------PQHKEELVEL 291 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~-------------------P~~K~~~v~~ 291 (473)
-.+-|+++|.+..||++|.+++++||--..-+..++.++||+..++||+.. ...|.++|+.
T Consensus 87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~ 166 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIAL 166 (227)
T ss_pred CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHH
Confidence 346789999999999999999999999999999999999999776777753 3589999999
Q ss_pred HhhCC---cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 292 LKKDG---ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 292 l~~~g---~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
+++.- .++|||||.||.+|+..||.=|+.+
T Consensus 167 lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 167 LRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 98852 6899999999999999977766653
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.2e-08 Score=92.42 Aligned_cols=125 Identities=23% Similarity=0.261 Sum_probs=99.5
Q ss_pred eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------------
Q 038599 219 LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------------ 274 (473)
Q Consensus 219 ~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------------ 274 (473)
.||+++. -...+.+++.+++++|+++|+++++.||.+...+..+.+++++...
T Consensus 5 lDGTLl~---~~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~ 81 (254)
T PF08282_consen 5 LDGTLLN---SDGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDS 81 (254)
T ss_dssp CCTTTCS---TTSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-H
T ss_pred ECCceec---CCCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheec
Confidence 4555432 3445778999999999999999999999999999999999998731
Q ss_pred --------------------------------------------------------------------------------
Q 038599 275 -------------------------------------------------------------------------------- 274 (473)
Q Consensus 275 -------------------------------------------------------------------------------- 274 (473)
T Consensus 82 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~ 161 (254)
T PF08282_consen 82 DDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELK 161 (254)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHH
T ss_pred cchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhc
Confidence
Q ss_pred -------------ceehccCh--hhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccE
Q 038599 275 -------------MVYAELLP--QHKEELVELLKKD----G-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHV 334 (473)
Q Consensus 275 -------------~v~a~~~P--~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~ 334 (473)
..+-+++| .+|...++.|.+. . .++++||+.||.+||+.++.|++|+ ++.+..+..||.
T Consensus 162 ~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~ 240 (254)
T PF08282_consen 162 KKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADY 240 (254)
T ss_dssp HHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSE
T ss_pred cccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCE
Confidence 01111222 4899888888753 2 7999999999999999999999998 999999999999
Q ss_pred EEecCCcccHHHH
Q 038599 335 ILMSNDIRKIPKA 347 (473)
Q Consensus 335 vl~~~~l~~l~~~ 347 (473)
++.+.+=.++.++
T Consensus 241 i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 241 ITPSNNDDGVAKA 253 (254)
T ss_dssp EESSGTCTHHHHH
T ss_pred EecCCCCChHHHh
Confidence 9977665666654
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.3e-07 Score=101.75 Aligned_cols=52 Identities=29% Similarity=0.436 Sum_probs=48.3
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 297 ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.|+.+|||.||.+||+.|+.|+||| ++.+..++.||+|..+++-.++..+++
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5999999999999999999999999 999999999999998888888887775
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.2e-07 Score=88.41 Aligned_cols=98 Identities=33% Similarity=0.422 Sum_probs=77.6
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-----------------cChhhHHHHHHHHhh
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-----------------LLPQHKEELVELLKK 294 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-----------------~~P~~K~~~v~~l~~ 294 (473)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+. .+++. ..|..|...++.+.+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD--YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC--eEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 57999999999999999999999999999999999999986 44321 124567777776644
Q ss_pred C-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccc
Q 038599 295 D-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESG 332 (473)
Q Consensus 295 ~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~a 332 (473)
+ | .+.|+||+.||.++++.|+++++++ ......+.+.
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~ 199 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAK 199 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhcc
Confidence 3 3 5999999999999999999999996 3333333333
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.60 E-value=2e-07 Score=90.82 Aligned_cols=128 Identities=22% Similarity=0.306 Sum_probs=96.7
Q ss_pred EeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---------------------
Q 038599 216 YVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--------------------- 274 (473)
Q Consensus 216 ~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--------------------- 274 (473)
+.-.||+++- -...+.+++.++|++|+++|++++++||++...+..+.+++|+...
T Consensus 3 ~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~ 79 (256)
T TIGR00099 3 FIDLDGTLLN---DDHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKP 79 (256)
T ss_pred EEeCCCCCCC---CCCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecC
Confidence 3445777753 1234778999999999999999999999999999999999998732
Q ss_pred --------------------------cee---------------------------------------------------
Q 038599 275 --------------------------MVY--------------------------------------------------- 277 (473)
Q Consensus 275 --------------------------~v~--------------------------------------------------- 277 (473)
.++
T Consensus 80 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (256)
T TIGR00099 80 LDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIE 159 (256)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHH
Confidence 000
Q ss_pred --------------------hccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccc
Q 038599 278 --------------------AELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAME 330 (473)
Q Consensus 278 --------------------a~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~ 330 (473)
-+..| ..|..-++.+.+. | .++++||+.||.+|++.|++|++|+ ++.+..++
T Consensus 160 ~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~ 238 (256)
T TIGR00099 160 ALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKA 238 (256)
T ss_pred HhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHH
Confidence 00011 1455555555443 2 6999999999999999999999998 88888999
Q ss_pred cccEEEecCCcccHHHH
Q 038599 331 SGHVILMSNDIRKIPKA 347 (473)
Q Consensus 331 ~ad~vl~~~~l~~l~~~ 347 (473)
.||+++.+++-.++..+
T Consensus 239 ~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 239 LADYVTDSNNEDGVALA 255 (256)
T ss_pred hCCEEecCCCCcchhhh
Confidence 99999987777776653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.4e-07 Score=87.15 Aligned_cols=114 Identities=21% Similarity=0.301 Sum_probs=85.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-------------------cChhhHHHHHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-------------------LLPQHKEELVELL 292 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-------------------~~P~~K~~~v~~l 292 (473)
.++|++.+.++.|+++|+++.++||.....+..+.+.+|+....+++. .....|...++.+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~ 163 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHI 163 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHH
Confidence 478999999999999999999999999999999999999974334431 0124588888877
Q ss_pred hhC-C--cEEEEcCCcccHHHHHH--CCeeEEeCCCC-CccccccccEEEecCCcccHHHH
Q 038599 293 KKD-G--ATAMVGDGINDAPALAA--VDIGISMGISG-SALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 293 ~~~-g--~v~mvGDG~ND~~al~~--AdvgIa~g~~~-~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
.++ | .+.|+||+.||..+.++ ++++++.|... .+.....+|.++ +++..+..+
T Consensus 164 ~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~ 222 (224)
T PLN02954 164 KKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIEV 222 (224)
T ss_pred HHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHHh
Confidence 654 3 79999999999999777 56666655221 122344688888 566666543
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.2e-06 Score=83.55 Aligned_cols=118 Identities=24% Similarity=0.271 Sum_probs=92.2
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ceeh-------ccChhhHHHHHHHHhhCC-cEE
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVYA-------ELLPQHKEELVELLKKDG-ATA 299 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~a-------~~~P~~K~~~v~~l~~~g-~v~ 299 (473)
...+-|+++++++.|+++|++..++|+++...+..+.++.|+..- .+++ ...|+.....++.+.... .++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 456789999999999999999999999999999999999998732 1222 123556666666666554 699
Q ss_pred EEcCCcccHHHHHHCC---eeEEeCCC-CCccccccccEEEecCCcccHHHHHH
Q 038599 300 MVGDGINDAPALAAVD---IGISMGIS-GSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 300 mvGDG~ND~~al~~Ad---vgIa~g~~-~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||||..+|..|-++|+ +|+..|.. ........+|+++ +++..+...+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999998 67777742 3455666799999 77877776553
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.8e-07 Score=84.33 Aligned_cols=78 Identities=31% Similarity=0.378 Sum_probs=64.8
Q ss_pred CchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc-------------Chh-h--HHHHHHHH------
Q 038599 235 SGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL-------------LPQ-H--KEELVELL------ 292 (473)
Q Consensus 235 ~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~-------------~P~-~--K~~~v~~l------ 292 (473)
+++.+.|+.++++|++++++||+....+..+++.+|++...+++.- +|. + |.+.++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 7777999999999999999999999999999999999864333322 222 3 99999999
Q ss_pred hhCC-cEEEEcCCcccHHHHH
Q 038599 293 KKDG-ATAMVGDGINDAPALA 312 (473)
Q Consensus 293 ~~~g-~v~mvGDG~ND~~al~ 312 (473)
+... .+.++|||.||.++|+
T Consensus 172 ~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp THTCCEEEEEESSGGGHHHHH
T ss_pred CCCCCeEEEEECCHHHHHHhC
Confidence 2333 8999999999999986
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.46 E-value=9.2e-07 Score=83.90 Aligned_cols=90 Identities=19% Similarity=0.300 Sum_probs=74.0
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-c----------Ch------------hhHHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-L----------LP------------QHKEE 287 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-~----------~P------------~~K~~ 287 (473)
.+++|++.+.++.|++.|+++.++||........+.+.++.. ..++++ + .| ..|..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~-~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc-ccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 468999999999999999999999999999999888887543 234331 1 12 24899
Q ss_pred HHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 288 LVELLKKDG-ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 288 ~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
+++.++... .+.|+|||.||..+++.||+.++-+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 999988766 8999999999999999999988753
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.40 E-value=9.1e-07 Score=80.79 Aligned_cols=80 Identities=29% Similarity=0.326 Sum_probs=67.8
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceeh-------------------ccChhhHHHHHHHHh
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA-------------------ELLPQHKEELVELLK 293 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a-------------------~~~P~~K~~~v~~l~ 293 (473)
++|++.+.++.+++.|++++++||.....+..+++.+|+. .+++ ...+..|...++.++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~--~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID--DVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc--hheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 5899999999999999999999999999999999999987 3322 223578999999876
Q ss_pred hC----C-cEEEEcCCcccHHHHHHC
Q 038599 294 KD----G-ATAMVGDGINDAPALAAV 314 (473)
Q Consensus 294 ~~----g-~v~mvGDG~ND~~al~~A 314 (473)
++ . .+.|+|||.||.++++.|
T Consensus 152 ~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 54 2 699999999999999865
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.2e-06 Score=82.37 Aligned_cols=59 Identities=14% Similarity=0.048 Sum_probs=48.5
Q ss_pred CceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 211 GKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 211 G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
..+.++.-.||+++- =...+.+.++++|++|+++|+++++.||.....+..+.+++|++
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 356677778888863 12234567899999999999999999999999999999999985
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.2e-06 Score=83.34 Aligned_cols=88 Identities=20% Similarity=0.260 Sum_probs=73.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc---cC----------h----------hhHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE---LL----------P----------QHKEEL 288 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~---~~----------P----------~~K~~~ 288 (473)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +..+.++++ .+ | ..|..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 67999999999999999999999999999999999988 654345432 11 1 248899
Q ss_pred HHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 289 VELLKKDG-ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 289 v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
++.++... .+.|+|||.||..|.++||+.++-
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 99888775 899999999999999999997663
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.2e-06 Score=80.37 Aligned_cols=119 Identities=20% Similarity=0.227 Sum_probs=85.9
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc-----cCh--hhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE-----LLP--QHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~-----~~P--~~K~~~v~~l~~~g-~v~m 300 (473)
..+.|++.+.++.|++.|+++.++||........+.+++|+.. +.+++. ..| +--..+++.++... .++|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~ 171 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF 171 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence 5688999999999999999999999999999999999999862 122211 122 22234444454443 7999
Q ss_pred EcCCcccHHHHHHCCe-eEEeC--CC-CCccccccccEEEecCCcccHHHHHHHH
Q 038599 301 VGDGINDAPALAAVDI-GISMG--IS-GSALAMESGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 301 vGDG~ND~~al~~Adv-gIa~g--~~-~~~~a~~~ad~vl~~~~l~~l~~~i~~~ 351 (473)
+||+.||..+.+.+++ +|.+. .. ..+.....++.++ +++..+...+.++
T Consensus 172 igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 172 VGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 9999999999999999 55543 11 1233345688888 8888888877543
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.34 E-value=6.2e-06 Score=81.24 Aligned_cols=57 Identities=19% Similarity=0.117 Sum_probs=47.5
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
+.++.-.||+++. -.+.+.++++++|++|+++|++++++||.+...+..+.+++|+.
T Consensus 5 kli~~DlDGTLl~---~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 5 LLVFTDLDGTLLD---HHTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred eEEEEcCcccCcC---CCCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4566667888763 13456788999999999999999999999999999999999875
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.5e-06 Score=80.06 Aligned_cols=89 Identities=16% Similarity=0.165 Sum_probs=73.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ceehc---------------------c--ChhhH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVYAE---------------------L--LPQHK 285 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~a~---------------------~--~P~~K 285 (473)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+..- .+++. . ....|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 47899999999999999999999999999999999999998631 23321 0 11259
Q ss_pred HHHHHHHhhC-C-cEEEEcCCcccHHHHHHCCeeEE
Q 038599 286 EELVELLKKD-G-ATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 286 ~~~v~~l~~~-g-~v~mvGDG~ND~~al~~AdvgIa 319 (473)
.++++.++++ . .+.|+|||.||..|.++||+-.|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 9999999886 5 89999999999999999987554
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.4e-06 Score=79.89 Aligned_cols=90 Identities=16% Similarity=0.073 Sum_probs=75.5
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc------------------cChhhHHHHHHH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE------------------LLPQHKEELVEL 291 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~------------------~~P~~K~~~v~~ 291 (473)
...++|++.+.++.+++.|++++++|+.....+..+++++|++ .+++. ..+++|...++.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~--~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~ 162 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID--NAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAE 162 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc--ceEecceEEcCCCEEeCCccCCCCCChHHHHHHHH
Confidence 4568999999999999999999999999999999999999997 34322 224678888877
Q ss_pred HhhC-C----cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 292 LKKD-G----ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 292 l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
+.++ + .+.++||+.+|.++++.|+.++.++
T Consensus 163 ~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 163 LLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 6533 3 5899999999999999999999885
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.26 E-value=7.8e-06 Score=76.77 Aligned_cols=116 Identities=21% Similarity=0.224 Sum_probs=81.5
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc-----c--ChhhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE-----L--LPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~-----~--~P~~K~~~v~~l~~~g-~v~m 300 (473)
-++.|++.+.+++|++.|+++.++|+.+...+....+.+|+.. +.+++. . .|+--..+++.++-.. .++|
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~ 153 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVM 153 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEE
Confidence 3678999999999999999999999999999999999999862 222221 1 2222233333343333 6999
Q ss_pred EcCCcccHHHHHHCCee---EEeCC-CCCccccccccEEEecCCcccHHHHH
Q 038599 301 VGDGINDAPALAAVDIG---ISMGI-SGSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 301 vGDG~ND~~al~~Advg---Ia~g~-~~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
|||+.+|..+.+++++. +..|. +..+.....+|+++ +++..+..++
T Consensus 154 igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 154 VGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred EcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 99999999999999984 33331 12234456788887 6676665543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.25 E-value=1e-05 Score=78.82 Aligned_cols=52 Identities=19% Similarity=0.275 Sum_probs=43.2
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEeCCCCC---cccccc--c-cEEEecCCcccHHHHHH
Q 038599 297 ATAMVGDGINDAPALAAVDIGISMGISGS---ALAMES--G-HVILMSNDIRKIPKAIK 349 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~g~~~~---~~a~~~--a-d~vl~~~~l~~l~~~i~ 349 (473)
.++++||+.||.+|++.|+.|++|+ ++. +..++. | ++|..+++-.++.++++
T Consensus 196 ~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 196 KVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred eEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 5999999999999999999999998 665 356765 4 58887888888887765
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.1e-05 Score=80.40 Aligned_cols=89 Identities=18% Similarity=0.170 Sum_probs=73.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceeh-----ccChhhHHHHHHHHhhCCcEEEEcCCcc
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA-----ELLPQHKEELVELLKKDGATAMVGDGIN 306 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a-----~~~P~~K~~~v~~l~~~g~v~mvGDG~N 306 (473)
+.+|++.+.+++++++|+++.++|+-+...++.+++++|+-. .+.+ +..|+.|.+.+++...++...|+||..+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-~Vigsd~~~~~kg~~K~~~l~~~l~~~~~~yvGDS~~ 150 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-GVFASDGTTNLKGAAKAAALVEAFGERGFDYAGNSAA 150 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-EEEeCCCccccCCchHHHHHHHHhCccCeeEecCCHH
Confidence 478999999999999999999999999999999999999722 3332 3467778777664433334788999999
Q ss_pred cHHHHHHCCeeEEeC
Q 038599 307 DAPALAAVDIGISMG 321 (473)
Q Consensus 307 D~~al~~AdvgIa~g 321 (473)
|.++++.|+-.++++
T Consensus 151 Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 151 DLPVWAAARRAIVVG 165 (479)
T ss_pred HHHHHHhCCCeEEEC
Confidence 999999999999996
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.2e-05 Score=76.06 Aligned_cols=115 Identities=21% Similarity=0.216 Sum_probs=81.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-c------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-E------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|+++|+++.++|+.....+..+.+..|+.. +.+++ + ..|+--.++++.+.... .++||
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 161 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMV 161 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEE
Confidence 367999999999999999999999999999999999999973 11221 1 12333334444444333 79999
Q ss_pred cCCcccHHHHHHCCe---eEEeCCCCC-ccccccccEEEecCCcccHHHHH
Q 038599 302 GDGINDAPALAAVDI---GISMGISGS-ALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 302 GDG~ND~~al~~Adv---gIa~g~~~~-~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
||+.+|..+.++|++ ++..|.... +.....+|.++ +++..+..++
T Consensus 162 GDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 162 GDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred CCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 999999999999998 333331112 22344688887 6787777654
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.1e-05 Score=67.38 Aligned_cols=87 Identities=30% Similarity=0.332 Sum_probs=66.2
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--ccceeh-----------------------ccChh
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA--FDMVYA-----------------------ELLPQ 283 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~--~~~v~a-----------------------~~~P~ 283 (473)
...++++++.+.+++|+++|++++++||.....+..+.++.|+. .+.++. ...|+
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 34588999999999999999999999999999999999999973 222222 22334
Q ss_pred hHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCC
Q 038599 284 HKEELVELLKKDG-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 284 ~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Ad 315 (473)
.+..+.+.+.... .+.|+||+.+|..+++.++
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g 133 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAG 133 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcC
Confidence 4444444444433 7999999999999999843
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.1e-05 Score=74.10 Aligned_cols=113 Identities=18% Similarity=0.175 Sum_probs=77.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc-----cCh--hhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE-----LLP--QHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~-----~~P--~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.++++.|++.|+++.++|+.+...+..+.++.|+.. +.+++. ..| +-=....+.+.... .++|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 164 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYV 164 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEe
Confidence 578999999999999999999999999999999999999852 122221 112 21223333333323 69999
Q ss_pred cCCcccHHHHHHCCeeEE-e--CCCCC-ccccccccEEEecCCcccHHH
Q 038599 302 GDGINDAPALAAVDIGIS-M--GISGS-ALAMESGHVILMSNDIRKIPK 346 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa-~--g~~~~-~~a~~~ad~vl~~~~l~~l~~ 346 (473)
||..+|..+.++|++-.. + |.... +.....+|.++ +++..+..
T Consensus 165 gDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 165 GDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred CCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 999999999999998433 3 31111 22234688877 66666544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.8e-05 Score=71.28 Aligned_cols=106 Identities=16% Similarity=0.085 Sum_probs=74.4
Q ss_pred CCceeeEeeeCCeEEEEEEecC----ccCCchHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHcCCCcccee
Q 038599 210 GGKTRGYVYLGATPVGTFSLSD----SCRSGALEAIKDLKSLGIKSFILAGDSHA--------AALYAQDQLDHAFDMVY 277 (473)
Q Consensus 210 ~G~~vi~va~d~~~lG~i~l~d----~lr~~a~~~I~~L~~~gi~v~mlTGD~~~--------~a~~~a~~~gi~~~~v~ 277 (473)
.|++++.+-+|+++.|--.+.+ ++.|++++++++|++.|+++.++|+.... ......+..|+. .++
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~--~~~ 79 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD--DIY 79 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC--EEE
Confidence 3688899999998876533222 26899999999999999999999987631 233445677876 433
Q ss_pred h------------ccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCee
Q 038599 278 A------------ELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 278 a------------~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Advg 317 (473)
- ...|+-=..+++.+.... .+.||||..+|..+-++|++-
T Consensus 80 ~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~ 132 (173)
T PRK06769 80 LCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNAT 132 (173)
T ss_pred ECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 1 112222244444444333 799999999999999999983
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.2e-05 Score=77.44 Aligned_cols=65 Identities=20% Similarity=0.231 Sum_probs=52.8
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccccccc----EEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGH----VILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad----~vl~~~~l~~l~~~i~ 349 (473)
.|...++.|.++ | .++++||+.||.+|++.++.|++|+ ++.+..++.|+ ++...++-.++.+.++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 677777776543 3 6999999999999999999999998 88888889999 7766666667777664
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=4e-05 Score=75.52 Aligned_cols=117 Identities=21% Similarity=0.320 Sum_probs=80.9
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hccChhhH--HHHH----HHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AELLPQHK--EELV----ELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~~~P~~K--~~~v----~~l~~~g-~v~m 300 (473)
.++.|++.++++.|++.|+++.++|+.+...+..+.++.|+.. +.++ ++-.+..| ...+ +.+.-.. .++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 4678999999999999999999999999998998989999862 1122 22222222 2233 3332223 7999
Q ss_pred EcCCcccHHHHHHCCe-eEEe--CCC-CCccccccccEEEecCCcccHHHHHH
Q 038599 301 VGDGINDAPALAAVDI-GISM--GIS-GSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 301 vGDG~ND~~al~~Adv-gIa~--g~~-~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|||+.||..+.+.|++ .+.+ |.. ..+.....+|.++ +++..+.+++.
T Consensus 180 IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 180 VGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred ECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999997 3333 311 1223345788888 67777776544
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=8e-05 Score=73.41 Aligned_cols=113 Identities=17% Similarity=0.161 Sum_probs=80.0
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-hccChhhHHHHHHH-HhhC---C-cEEEEcC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-AELLPQHKEELVEL-LKKD---G-ATAMVGD 303 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~~~P~~K~~~v~~-l~~~---g-~v~mvGD 303 (473)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+... .+. ++..+ .|...++. +++. . .++||||
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IGD 220 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVGD 220 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEECC
Confidence 5689999999999999999999999999999999999998621 111 11111 23333332 2322 2 6999999
Q ss_pred CcccHHHHHHCCee---EEeCCCCCc--cccccccEEEecCCcccHHHHH
Q 038599 304 GINDAPALAAVDIG---ISMGISGSA--LAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 304 G~ND~~al~~Advg---Ia~g~~~~~--~a~~~ad~vl~~~~l~~l~~~i 348 (473)
+.+|..+.++|++- +..| .... .....+|+++ +++..+.+++
T Consensus 221 s~~Di~aA~~AG~~~I~v~~g-~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 221 ETRDVEAARQVGLIAVAVTWG-FNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHCCCeEEEEecC-CCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 99999999999983 2233 1121 2234689888 7788887755
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.5e-05 Score=72.54 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=76.1
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc---------ChhhHHHHHHHHhhCC----c
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL---------LPQHKEELVELLKKDG----A 297 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~---------~P~~K~~~v~~l~~~g----~ 297 (473)
-++.|++.++++.|++.|+++.++|+........+.+++|+. .+|... .|... -+.+.+++.| .
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~--~~f~~~~~~~~~~~~Kp~~~-~~~~~~~~~~~~~~~ 167 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR--DYFDALASAEKLPYSKPHPE-VYLNCAAKLGVDPLT 167 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch--hcccEEEEcccCCCCCCCHH-HHHHHHHHcCCCHHH
Confidence 467899999999999999999999999999999999999986 333221 22221 2233333333 6
Q ss_pred EEEEcCCcccHHHHHHCCeeEEeCCCCC---ccccccccEEEecCCcccHH
Q 038599 298 TAMVGDGINDAPALAAVDIGISMGISGS---ALAMESGHVILMSNDIRKIP 345 (473)
Q Consensus 298 v~mvGDG~ND~~al~~AdvgIa~g~~~~---~~a~~~ad~vl~~~~l~~l~ 345 (473)
++|+||..||..+.+.|++....-..+. +.-...+|.++ .++..+.
T Consensus 168 ~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 168 CVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred eEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 9999999999999999998543311221 11223467766 5555543
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00011 Score=70.53 Aligned_cols=116 Identities=15% Similarity=0.050 Sum_probs=80.6
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ceeh-c------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVYA-E------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~a-~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+.+...+..+-++.|+... .+.+ + ..|+-=..+++.+.-.. .++||
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~I 174 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYV 174 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEe
Confidence 5789999999999999999999999999888888888998631 1211 1 12333344445554433 79999
Q ss_pred cCCcccHHHHHHCCee---EEeCCCCC--ccccccccEEEecCCcccHHHHHH
Q 038599 302 GDGINDAPALAAVDIG---ISMGISGS--ALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 302 GDG~ND~~al~~Advg---Ia~g~~~~--~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||+.+|..+.+.|++. +..|.... ......+|+++ +++..+.+.+.
T Consensus 175 GDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~~ 225 (229)
T PRK13226 175 GDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPAT 225 (229)
T ss_pred CCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHhc
Confidence 9999999999999984 33331111 12234588888 66766665543
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=7.4e-05 Score=73.40 Aligned_cols=131 Identities=15% Similarity=0.199 Sum_probs=91.2
Q ss_pred ceeeEeeeCCeEEEEEEe--cCccCCchHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCCcc--------------
Q 038599 212 KTRGYVYLGATPVGTFSL--SDSCRSGALEAIKDLKS-LGIKSFILAGDSHAAALYAQDQLDHAFD-------------- 274 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l--~d~lr~~a~~~I~~L~~-~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------- 274 (473)
.+.+++-.||+++-...= .-.+-++++++|++|++ .|+.++++||.+......+.+.+++..-
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 93 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT 93 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe
Confidence 356777789988642100 11455789999999998 7999999999999999888776664210
Q ss_pred ---------------------------------------------------------------------ceehccCh--h
Q 038599 275 ---------------------------------------------------------------------MVYAELLP--Q 283 (473)
Q Consensus 275 ---------------------------------------------------------------------~v~a~~~P--~ 283 (473)
..+-++.| .
T Consensus 94 ~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~ 173 (266)
T PRK10187 94 HIVHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGT 173 (266)
T ss_pred eeccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCC
Confidence 00011112 2
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHC----CeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAV----DIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~A----dvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+|...++.+.++ | .++++||+.||.+|++.+ +.||+|| ++. ..|++.+ ++...+...+.
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l--~~~~~v~~~L~ 241 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRL--AGVPDVWSWLE 241 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeC--CCHHHHHHHHH
Confidence 677777765544 2 589999999999999999 9999998 543 4477777 56776666554
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.83 E-value=7e-05 Score=72.67 Aligned_cols=131 Identities=18% Similarity=0.092 Sum_probs=90.9
Q ss_pred eeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc----------------------
Q 038599 217 VYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---------------------- 274 (473)
Q Consensus 217 va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---------------------- 274 (473)
.-.|++++.--.=..+..|...+.+++++++|+.++++||.+......+.+++++...
T Consensus 6 tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~ 85 (249)
T TIGR01485 6 SDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQH 85 (249)
T ss_pred EcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHH
Confidence 3457777621001345678999999999999999999999999999999988887532
Q ss_pred --------------------------------------------------------------ce---eh-----ccCh--
Q 038599 275 --------------------------------------------------------------MV---YA-----ELLP-- 282 (473)
Q Consensus 275 --------------------------------------------------------------~v---~a-----~~~P-- 282 (473)
.+ .. +..|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~ 165 (249)
T TIGR01485 86 WAEYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQG 165 (249)
T ss_pred HHHHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCC
Confidence 00 00 1122
Q ss_pred hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHH-CCeeEEeCCCCCcccccccc-------EEEecCCcccHHHHH
Q 038599 283 QHKEELVELLKKD-G----ATAMVGDGINDAPALAA-VDIGISMGISGSALAMESGH-------VILMSNDIRKIPKAI 348 (473)
Q Consensus 283 ~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~-AdvgIa~g~~~~~~a~~~ad-------~vl~~~~l~~l~~~i 348 (473)
..|...++.+.+. | .++++||+.||.+|++. ++.|++|+ ++.+..++.++ ++.....-.++.+.+
T Consensus 166 ~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l 243 (249)
T TIGR01485 166 SGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAI 243 (249)
T ss_pred CChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHH
Confidence 3677777777553 2 69999999999999998 67899998 77766665432 444333445555544
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00021 Score=69.42 Aligned_cols=110 Identities=15% Similarity=0.134 Sum_probs=77.6
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--c-ceehc------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--D-MVYAE------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~-~v~a~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+-+...+...-+++|+.. + .+.++ ..|+--....+.+.-.. .++||
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~v 187 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVF 187 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEE
Confidence 568899999999999999999999999999999999999872 1 12222 12333344444444333 69999
Q ss_pred cCCcccHHHHHHCCee---EEeCCCCCccccccccEEEecCCccc
Q 038599 302 GDGINDAPALAAVDIG---ISMGISGSALAMESGHVILMSNDIRK 343 (473)
Q Consensus 302 GDG~ND~~al~~Advg---Ia~g~~~~~~a~~~ad~vl~~~~l~~ 343 (473)
||..+|..+-++|++- +..|....+.....+|+++ +++..
T Consensus 188 gDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi--~~~~e 230 (248)
T PLN02770 188 EDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLI--KDYED 230 (248)
T ss_pred cCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEe--ccchh
Confidence 9999999999999983 3323111222234688888 56665
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00028 Score=64.95 Aligned_cols=114 Identities=25% Similarity=0.371 Sum_probs=71.5
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCccceeh------------ccChhhH
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSH---------------AAALYAQDQLDHAFDMVYA------------ELLPQHK 285 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~---------------~~a~~~a~~~gi~~~~v~a------------~~~P~~K 285 (473)
+.|++.+++++|++.|+++.++|+.+. .....+-+..|+..+.++. ...|+--
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~KP~p~~~ 109 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRKPKPGML 109 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCCCCHHHH
Confidence 578999999999999999999998762 1122334556763223331 1123333
Q ss_pred HHHHHHHhhCC-cEEEEcCCcccHHHHHHCCee-EEeCCCCCc---cccccc--cEEEecCCcccHHHHHH
Q 038599 286 EELVELLKKDG-ATAMVGDGINDAPALAAVDIG-ISMGISGSA---LAMESG--HVILMSNDIRKIPKAIK 349 (473)
Q Consensus 286 ~~~v~~l~~~g-~v~mvGDG~ND~~al~~Advg-Ia~g~~~~~---~a~~~a--d~vl~~~~l~~l~~~i~ 349 (473)
...++.+.-.. .++||||..+|..+.+.|++. |.+. .+.. .....+ |+++ +++..+.+++.
T Consensus 110 ~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii--~~l~el~~~l~ 177 (181)
T PRK08942 110 LSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVL--DSLADLPQALK 177 (181)
T ss_pred HHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceee--cCHHHHHHHHH
Confidence 44444444333 799999999999999999973 2232 2221 122234 7777 66777666554
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00017 Score=70.14 Aligned_cols=85 Identities=20% Similarity=0.077 Sum_probs=63.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---cceeh-c------cChhhHHHHHHHHhhC-C-cEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMVYA-E------LLPQHKEELVELLKKD-G-ATA 299 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v~a-~------~~P~~K~~~v~~l~~~-g-~v~ 299 (473)
++.|++.+.++.|+++|+++.++|+.....+..+-+++|+.. +.+++ + ..|+-=...++.+.-. . .++
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l 178 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACV 178 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheE
Confidence 468999999999999999999999999999999888888752 12221 1 1233333334444422 2 599
Q ss_pred EEcCCcccHHHHHHCCe
Q 038599 300 MVGDGINDAPALAAVDI 316 (473)
Q Consensus 300 mvGDG~ND~~al~~Adv 316 (473)
||||..+|..+-+.|++
T Consensus 179 ~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 179 KVGDTVPDIEEGRNAGM 195 (253)
T ss_pred EECCcHHHHHHHHHCCC
Confidence 99999999999999997
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00025 Score=67.13 Aligned_cols=114 Identities=25% Similarity=0.270 Sum_probs=79.9
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--c--cceehc-------cChhhHHHHHHHHhhC-C-c
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA--F--DMVYAE-------LLPQHKEELVELLKKD-G-A 297 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~--~--~~v~a~-------~~P~~K~~~v~~l~~~-g-~ 297 (473)
.++.||+.+.++.|++.|+++.++|+-.......+.+.+|+. . +.+++. ..|+-=...++.+.-. . .
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 478999999999999999999999999999999999999986 1 222222 1223223333444333 2 6
Q ss_pred EEEEcCCcccHHHHHHCCeeE--EeCCCCC----ccccccccEEEecCCcccHHHH
Q 038599 298 TAMVGDGINDAPALAAVDIGI--SMGISGS----ALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 298 v~mvGDG~ND~~al~~AdvgI--a~g~~~~----~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
++|+||+.+|..+-++|++.. .+. .+. +.....++.++ +++..+..+
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 999999999999999999975 232 222 12233577777 666666554
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00013 Score=70.28 Aligned_cols=84 Identities=14% Similarity=0.119 Sum_probs=62.2
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCc--cceehccC-hhhHHHHHHHHhhCCcEEEEcCCc
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGD----SHAAALYAQDQLDHAF--DMVYAELL-PQHKEELVELLKKDGATAMVGDGI 305 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD----~~~~a~~~a~~~gi~~--~~v~a~~~-P~~K~~~v~~l~~~g~v~mvGDG~ 305 (473)
+.+++++.+++++++|+++.++|+. ...++..+.+.+|++. +.+++.-. +..|......+++.|.++|+||..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~~~l~~~~i~i~vGDs~ 194 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKTQWIQDKNIRIHYGDSD 194 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHHHHHHhCCCeEEEeCCH
Confidence 3445999999999999999999997 7779999999999973 12222111 111111123456667789999999
Q ss_pred ccHHHHHHCCe
Q 038599 306 NDAPALAAVDI 316 (473)
Q Consensus 306 ND~~al~~Adv 316 (473)
||..+-+.|++
T Consensus 195 ~DI~aAk~AGi 205 (237)
T TIGR01672 195 NDITAAKEAGA 205 (237)
T ss_pred HHHHHHHHCCC
Confidence 99999999987
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00013 Score=70.28 Aligned_cols=87 Identities=22% Similarity=0.266 Sum_probs=65.8
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCcc----ceehccCh--hhHHHHHHHHhhCCcEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGD----SHAAALYAQDQLDHAFD----MVYAELLP--QHKEELVELLKKDGATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD----~~~~a~~~a~~~gi~~~----~v~a~~~P--~~K~~~v~~l~~~g~v~m 300 (473)
-.+.|++++.++.|+++|+++.++||. ...++..+.+..|++.+ .++..-++ ++|.. .+++.|.++|
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~---~l~~~~i~I~ 189 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQ---WLKKKNIRIF 189 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHH---HHHhcCCeEE
Confidence 346778999999999999999999995 46788999999999422 23332222 34554 4455678999
Q ss_pred EcCCcccHHHHHHCCe-eEEe
Q 038599 301 VGDGINDAPALAAVDI-GISM 320 (473)
Q Consensus 301 vGDG~ND~~al~~Adv-gIa~ 320 (473)
+||..+|..+-+.|++ +|..
T Consensus 190 IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 190 YGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred EcCCHHHHHHHHHcCCcEEEE
Confidence 9999999999999998 4443
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00041 Score=73.59 Aligned_cols=119 Identities=15% Similarity=0.212 Sum_probs=82.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-c-cChhhHHHHHH-HHhhCC--cEEEEcCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-E-LLPQHKEELVE-LLKKDG--ATAMVGDG 304 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-~-~~P~~K~~~v~-~l~~~g--~v~mvGDG 304 (473)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+.. + ..+..|..++. .+++.+ .+.||||.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~~~~~v~VGDs 409 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYDIKEAAVVGDR 409 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcCcceEEEEeCC
Confidence 678999999999999999999999999999999999999862 11111 1 11112223333 333333 79999999
Q ss_pred cccHHHHHHCCe-eEEeCC-CCCccccccccEEEecCCcccHHHHHHHHH
Q 038599 305 INDAPALAAVDI-GISMGI-SGSALAMESGHVILMSNDIRKIPKAIKLAR 352 (473)
Q Consensus 305 ~ND~~al~~Adv-gIa~g~-~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r 352 (473)
.+|..+.+.|++ .|.+.. ...+.....+|+++ +++..+.+++...+
T Consensus 410 ~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~~ 457 (459)
T PRK06698 410 LSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTVQ 457 (459)
T ss_pred HHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHHh
Confidence 999999999998 333321 12222234588888 77888777665443
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00053 Score=59.54 Aligned_cols=103 Identities=20% Similarity=0.232 Sum_probs=71.3
Q ss_pred eeEeeeCCeEEEEEEe-----cCccCCchHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCCCccceeh--
Q 038599 214 RGYVYLGATPVGTFSL-----SDSCRSGALEAIKDLKSLGIKSFILAGDS--------HAAALYAQDQLDHAFDMVYA-- 278 (473)
Q Consensus 214 vi~va~d~~~lG~i~l-----~d~lr~~a~~~I~~L~~~gi~v~mlTGD~--------~~~a~~~a~~~gi~~~~v~a-- 278 (473)
.+.+-.|+++..-... +..+.|++.++++.|++.|+++.++|+.. ......+.+++|+....++.
T Consensus 2 ~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 81 (132)
T TIGR01662 2 GVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACP 81 (132)
T ss_pred EEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 3455567766631111 23578999999999999999999999988 77788889999986332221
Q ss_pred -ccCh--hhHHHHHHHHh-hCC-cEEEEcC-CcccHHHHHHCCe
Q 038599 279 -ELLP--QHKEELVELLK-KDG-ATAMVGD-GINDAPALAAVDI 316 (473)
Q Consensus 279 -~~~P--~~K~~~v~~l~-~~g-~v~mvGD-G~ND~~al~~Adv 316 (473)
...| +-=..+++.++ -.. .++|||| ..+|..+.+.+++
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 1122 22234444452 333 7999999 5999999999887
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0006 Score=66.72 Aligned_cols=113 Identities=13% Similarity=0.101 Sum_probs=77.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-h------ccChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-A------ELLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a------~~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+.. +.++ + ...|+-=...++.+.-.. .++||
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~I 188 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVF 188 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEE
Confidence 568999999999999999999999999999999999999862 1121 1 112222233333443333 69999
Q ss_pred cCCcccHHHHHHCCee-EEeCCCCCccccccccEEEecCCcccHHH
Q 038599 302 GDGINDAPALAAVDIG-ISMGISGSALAMESGHVILMSNDIRKIPK 346 (473)
Q Consensus 302 GDG~ND~~al~~Advg-Ia~g~~~~~~a~~~ad~vl~~~~l~~l~~ 346 (473)
||..+|..|-++|++- |++...........+|.++ +++..+..
T Consensus 189 gDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~~ 232 (260)
T PLN03243 189 GNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLSV 232 (260)
T ss_pred cCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHHH
Confidence 9999999999999983 2332122222223578877 56655543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0005 Score=67.56 Aligned_cols=57 Identities=16% Similarity=0.036 Sum_probs=47.2
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
++++.-.|++++- -.+..-+.++++|++|+++|+.+++.||........+.+++|+.
T Consensus 2 KLIftDLDGTLLd---~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLD---LEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 3556667888753 23456677999999999999999999999999999999999985
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00066 Score=64.95 Aligned_cols=53 Identities=23% Similarity=0.320 Sum_probs=43.7
Q ss_pred EeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 216 YVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 216 ~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
+.-.|++++- .+..-+++.++|++|+++|++++++||.+...+..+.+++|+.
T Consensus 3 ~~DlDGTLl~----~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 3 FTDLDGTLLP----PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred EEeCCCCCcC----CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3445666653 4556678999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00063 Score=66.69 Aligned_cols=116 Identities=19% Similarity=0.152 Sum_probs=78.6
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---ccee-hcc------ChhhHHHHHHHHhhC-C-cEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMVY-AEL------LPQHKEELVELLKKD-G-ATA 299 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v~-a~~------~P~~K~~~v~~l~~~-g-~v~ 299 (473)
.+.|++.++++.|++.|+++.++||.....+..+-+..|+.. +.++ ++- .|+-=....+.+.-. . .++
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l 180 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACV 180 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceE
Confidence 568999999999999999999999999988887777666431 2222 211 122223334444432 2 589
Q ss_pred EEcCCcccHHHHHHCCe---eEEeCCCC------------------------CccccccccEEEecCCcccHHHHHH
Q 038599 300 MVGDGINDAPALAAVDI---GISMGISG------------------------SALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 300 mvGDG~ND~~al~~Adv---gIa~g~~~------------------------~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||||..+|..+-+.|++ |+..|... .+.....+|+++ +++..+...+.
T Consensus 181 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi--~~~~~l~~~l~ 255 (267)
T PRK13478 181 KVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVI--DTIADLPAVIA 255 (267)
T ss_pred EEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeeh--hhHHHHHHHHH
Confidence 99999999999999998 44443110 122234578888 77877777653
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00079 Score=63.86 Aligned_cols=110 Identities=17% Similarity=0.164 Sum_probs=72.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-cee-hc----cCh--hhHHHHHHHHhhCC-cEEEEc
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-MVY-AE----LLP--QHKEELVELLKKDG-ATAMVG 302 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-~v~-a~----~~P--~~K~~~v~~l~~~g-~v~mvG 302 (473)
++.|++.+.++.|+++|+++.++|+.+...+...-+..|+... .+. ++ ..| +-=....+.+.-.. .++|||
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~ig 162 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVE 162 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEe
Confidence 5789999999999999999999999887777776677777421 121 11 122 22222233333223 699999
Q ss_pred CCcccHHHHHHCCe-eEEeCCCCC-ccccccccEEEecCCcccH
Q 038599 303 DGINDAPALAAVDI-GISMGISGS-ALAMESGHVILMSNDIRKI 344 (473)
Q Consensus 303 DG~ND~~al~~Adv-gIa~g~~~~-~~a~~~ad~vl~~~~l~~l 344 (473)
|..+|..+-+.|++ .|.+. .+. ......+|+++ ++++.+
T Consensus 163 Ds~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~--~~~~el 203 (218)
T PRK11587 163 DAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVL--HSLEQL 203 (218)
T ss_pred cchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEe--cchhhe
Confidence 99999999999998 35553 222 22234577776 555443
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00051 Score=64.03 Aligned_cols=85 Identities=14% Similarity=0.061 Sum_probs=64.4
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--------ceehccChhhHHHHHHHHhhCC-cEEE
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--------MVYAELLPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--------~v~a~~~P~~K~~~v~~l~~~g-~v~m 300 (473)
.+++.+++.++++.|++.|+++.++||.+...+..+.+++|+..- .+.....|+.-..+++.+.-.. .++|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEE
Confidence 345677789999999999999999999999999999999998621 1111233444455555555444 7999
Q ss_pred EcCCcccHHHHHHC
Q 038599 301 VGDGINDAPALAAV 314 (473)
Q Consensus 301 vGDG~ND~~al~~A 314 (473)
|||+.+|..+-++|
T Consensus 184 vGD~~~Di~aA~~a 197 (197)
T TIGR01548 184 VGDTVDDIITGRKA 197 (197)
T ss_pred EeCCHHHHHHHHhC
Confidence 99999999887764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00053 Score=67.26 Aligned_cols=118 Identities=19% Similarity=0.234 Sum_probs=79.8
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehcc-----------C--h----hhHHHHHHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAEL-----------L--P----QHKEELVEL 291 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~~-----------~--P----~~K~~~v~~ 291 (473)
-++||++.+.++.|++.|+++.++||-....+..+.+++|+.. ..++++. . | ..|.+.+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~ 199 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL 199 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence 4579999999999999999999999999999999999999842 2232111 1 2 246554432
Q ss_pred -----Hh--hCC-cEEEEcCCcccHHHHHHC---CeeEEeCC--CC----CccccccccEEEecCCcccHHHHH
Q 038599 292 -----LK--KDG-ATAMVGDGINDAPALAAV---DIGISMGI--SG----SALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 292 -----l~--~~g-~v~mvGDG~ND~~al~~A---dvgIa~g~--~~----~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
++ ... .+.++|||.||..|..-. .--+..|- .. -+.-+++=|+|+.++.--.++..+
T Consensus 200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~i 273 (277)
T TIGR01544 200 RNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSI 273 (277)
T ss_pred HHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHH
Confidence 22 122 799999999999985433 11222221 11 122456889999988766666544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00097 Score=60.89 Aligned_cols=106 Identities=16% Similarity=0.087 Sum_probs=76.5
Q ss_pred HHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCccceehccChhh
Q 038599 206 AKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDS-HAAALYAQDQLDHAFDMVYAELLPQH 284 (473)
Q Consensus 206 ~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~-~~~a~~~a~~~gi~~~~v~a~~~P~~ 284 (473)
.+.+.+.+.+.+..|+++.-- =...+.|++.+++++|++.|+++.++|+.+ ...+..+.+.+|+. .+.....|..
T Consensus 19 ~~~~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~--~~~~~~KP~p 94 (170)
T TIGR01668 19 LLKKVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP--VLPHAVKPPG 94 (170)
T ss_pred HHHHCCCCEEEEecCCccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE--EEcCCCCCCh
Confidence 345677788888888765421 123578999999999999999999999988 67778888899986 3333334432
Q ss_pred HHHHHHHHhhC---C-cEEEEcCCc-ccHHHHHHCCe
Q 038599 285 KEELVELLKKD---G-ATAMVGDGI-NDAPALAAVDI 316 (473)
Q Consensus 285 K~~~v~~l~~~---g-~v~mvGDG~-ND~~al~~Adv 316 (473)
. .+-..+++. . .++||||.. .|..+-+.+++
T Consensus 95 ~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 95 C-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred H-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCC
Confidence 2 222233333 3 699999998 79999999998
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0017 Score=68.99 Aligned_cols=161 Identities=16% Similarity=0.199 Sum_probs=121.2
Q ss_pred CeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--------------------------
Q 038599 221 ATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------------------------- 274 (473)
Q Consensus 221 ~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------------------- 274 (473)
..|.|++.+.-+.+++....|+.|-++-++.+-.|-.++...+-.|+++||...
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 468999999999999999999999999999999999999999999999999752
Q ss_pred ---------------------------------------------------------------------------ceehc
Q 038599 275 ---------------------------------------------------------------------------MVYAE 279 (473)
Q Consensus 275 ---------------------------------------------------------------------------~v~a~ 279 (473)
-.|.+
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 45888
Q ss_pred cChhhHHHHHHHHhhCC-cEEEEcCCcccHH--HHHHCCeeEEeCCCC------------Cc------------------
Q 038599 280 LLPQHKEELVELLKKDG-ATAMVGDGINDAP--ALAAVDIGISMGISG------------SA------------------ 326 (473)
Q Consensus 280 ~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~--al~~AdvgIa~g~~~------------~~------------------ 326 (473)
.+|+.-.+.|+-+|+.| .++.+|...|-.. -+-+||++|++..-. +.
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 89999999999999999 7888898877432 455789998874110 00
Q ss_pred cccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhH
Q 038599 327 LAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSV----TVKGAVLVLAVAGYP 381 (473)
Q Consensus 327 ~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~----~~n~~~~~la~~g~~ 381 (473)
...-+.|+-+....+-.+..+|.-+|.....+|+.+.|.+ +|.++.++-.++-.|
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP 1113 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLP 1113 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1111233333333455677888899999999999988755 444444444444434
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00084 Score=62.67 Aligned_cols=116 Identities=19% Similarity=0.306 Sum_probs=89.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------------------------------
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------------------------- 274 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------------------------- 274 (473)
.+-|++.++++.|++. +..+++|---.+-+.++|+.+|++..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4679999999999876 66777777778889999999999753
Q ss_pred -----ceehccChh---------------hHHHHHHHHhhC-C---cEEEEcCCcccHHHHHHCC----eeEEeCCCCCc
Q 038599 275 -----MVYAELLPQ---------------HKEELVELLKKD-G---ATAMVGDGINDAPALAAVD----IGISMGISGSA 326 (473)
Q Consensus 275 -----~v~a~~~P~---------------~K~~~v~~l~~~-g---~v~mvGDG~ND~~al~~Ad----vgIa~g~~~~~ 326 (473)
.+|.++.|. .|+++++.+.+. + ..++|||.+.|..+|+.+. +.|+. +|.+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaF--NGNe 239 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAF--NGNE 239 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEe--cCCc
Confidence 567777775 445555544433 2 4689999999999999873 45555 7999
Q ss_pred cccccccEEEecCCcccHHHHHHH
Q 038599 327 LAMESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 327 ~a~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
-+...||+.+.+++...+..++++
T Consensus 240 Yal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccccceEEeccchhhhhHHHHH
Confidence 999999999999988877777653
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0012 Score=62.49 Aligned_cols=90 Identities=16% Similarity=0.179 Sum_probs=64.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-h----ccCh--hhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-A----ELLP--QHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a----~~~P--~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+++++|++.|+++.++|+-+........+++|+.. +.++ + ...| +-=....+.+.-.. .++||
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~i 173 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMV 173 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence 578999999999999999999999988888888889999862 1121 1 1123 22222333333223 69999
Q ss_pred cCCc-ccHHHHHHCCe-eEEeC
Q 038599 302 GDGI-NDAPALAAVDI-GISMG 321 (473)
Q Consensus 302 GDG~-ND~~al~~Adv-gIa~g 321 (473)
||.. +|..+-++|++ .|.+.
T Consensus 174 gDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 174 GDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred CCChHHHHHHHHHCCCEEEEEC
Confidence 9998 99999999998 44443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00082 Score=70.14 Aligned_cols=65 Identities=25% Similarity=0.274 Sum_probs=46.9
Q ss_pred hHHHHHHHHhhC----C----cEEEEcCCcccHHHHHHCC-eeEEeCCCCCccccccc--------cEEEe-cCCcccHH
Q 038599 284 HKEELVELLKKD----G----ATAMVGDGINDAPALAAVD-IGISMGISGSALAMESG--------HVILM-SNDIRKIP 345 (473)
Q Consensus 284 ~K~~~v~~l~~~----g----~v~mvGDG~ND~~al~~Ad-vgIa~g~~~~~~a~~~a--------d~vl~-~~~l~~l~ 345 (473)
.|...++.|.++ | .++.+||+.||.++|+.++ .||+|+ ++.+..++.+ +++.. +.+-.++.
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~ 253 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGII 253 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHH
Confidence 577777777544 3 6899999999999999999 699998 7877666532 45533 23455555
Q ss_pred HHHH
Q 038599 346 KAIK 349 (473)
Q Consensus 346 ~~i~ 349 (473)
++++
T Consensus 254 ~al~ 257 (413)
T PLN02382 254 QAIG 257 (413)
T ss_pred HHHH
Confidence 5553
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0015 Score=59.93 Aligned_cols=129 Identities=19% Similarity=0.230 Sum_probs=75.2
Q ss_pred eeEeeeCCeEEEEEEe-----cCccCCchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCc
Q 038599 214 RGYVYLGATPVGTFSL-----SDSCRSGALEAIKDLKSLGIKSFILAGDSH---------------AAALYAQDQLDHAF 273 (473)
Q Consensus 214 vi~va~d~~~lG~i~l-----~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~---------------~~a~~~a~~~gi~~ 273 (473)
.+++-+|++++.--.. +-.+.|++.+++++|+++|+++.++|.-+. .....+..+.|+..
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL 82 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 4556677776510000 112478999999999999999999997663 11223444555443
Q ss_pred cceeh----------------ccCh--hhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCee--EEeCCCCCc---ccc
Q 038599 274 DMVYA----------------ELLP--QHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIG--ISMGISGSA---LAM 329 (473)
Q Consensus 274 ~~v~a----------------~~~P--~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Advg--Ia~g~~~~~---~a~ 329 (473)
+.++. ...| +-=....+.+.-.. .++||||..+|..+-++|++. |... .+.. ...
T Consensus 83 ~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~ 161 (176)
T TIGR00213 83 DGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAE 161 (176)
T ss_pred cEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCccccccc
Confidence 23321 1122 22222233333223 699999999999999999984 3332 3321 122
Q ss_pred ccccEEEecCCcccHH
Q 038599 330 ESGHVILMSNDIRKIP 345 (473)
Q Consensus 330 ~~ad~vl~~~~l~~l~ 345 (473)
..+|+++ +++..+.
T Consensus 162 ~~ad~~i--~~~~el~ 175 (176)
T TIGR00213 162 NIADWVL--NSLADLP 175 (176)
T ss_pred ccCCEEe--ccHHHhh
Confidence 3488888 5565543
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0017 Score=66.66 Aligned_cols=111 Identities=13% Similarity=0.153 Sum_probs=77.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-c------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-E------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
.+.||+.+.++.|++.|+++.++|+.+...+..+-+.+|+.. +.+++ + ..|+-=...++.+.-.. .++||
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~I 295 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVF 295 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 467999999999999999999999999999999999999863 11211 1 12222333444444334 79999
Q ss_pred cCCcccHHHHHHCCee-EEeCCCCCcc-ccccccEEEecCCcccHH
Q 038599 302 GDGINDAPALAAVDIG-ISMGISGSAL-AMESGHVILMSNDIRKIP 345 (473)
Q Consensus 302 GDG~ND~~al~~Advg-Ia~g~~~~~~-a~~~ad~vl~~~~l~~l~ 345 (473)
||..+|..|-+.|++- |.+. .+.+. ....+|+++ +++..+.
T Consensus 296 GDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI--~s~~EL~ 338 (381)
T PLN02575 296 GNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVV--RRLDELS 338 (381)
T ss_pred cCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEE--CCHHHHH
Confidence 9999999999999983 3332 22211 123478877 6666553
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0013 Score=62.09 Aligned_cols=89 Identities=12% Similarity=0.040 Sum_probs=71.1
Q ss_pred ccCCchHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCC---Ccccee-------------hccChhhHHHHHHHH-h
Q 038599 232 SCRSGALEAI-KDLKSLGIKSFILAGDSHAAALYAQDQLDH---AFDMVY-------------AELLPQHKEELVELL-K 293 (473)
Q Consensus 232 ~lr~~a~~~I-~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi---~~~~v~-------------a~~~P~~K~~~v~~l-~ 293 (473)
.++|++.+.| +.+++.|++++++|+-...-+..+++.+|+ + ..+. .++..++|.+.++.. .
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~ 173 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIG 173 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceEEEEEEEEEccEECCccCCChHHHHHHHHHhC
Confidence 4589999999 578889999999999999999999999995 3 1111 113357999888865 3
Q ss_pred hCC-cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 294 KDG-ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 294 ~~g-~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
... ...+-||..||.|+|+.|+..++++
T Consensus 174 ~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 174 TPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 223 5568899999999999999999995
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0013 Score=58.73 Aligned_cols=108 Identities=19% Similarity=0.203 Sum_probs=86.6
Q ss_pred HHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChh
Q 038599 204 AEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQ 283 (473)
Q Consensus 204 ~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~ 283 (473)
.+.+.++|.+.+.+-.|.+++..= ....-|+.++=+.+++++|+++.++|..++..+..+++.+|++ .++....|-
T Consensus 20 ~~~L~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~--fi~~A~KP~ 95 (175)
T COG2179 20 PDILKAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP--FIYRAKKPF 95 (175)
T ss_pred HHHHHHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc--eeecccCcc
Confidence 467788999999998899887632 2335677888889999999999999999999999999999998 888877886
Q ss_pred hHHHHHHHHhhCC----cEEEEcCC-cccHHHHHHCCe
Q 038599 284 HKEELVELLKKDG----ATAMVGDG-INDAPALAAVDI 316 (473)
Q Consensus 284 ~K~~~v~~l~~~g----~v~mvGDG-~ND~~al~~Adv 316 (473)
.+ .+-+++++.+ .|+||||. ..|+.+-..+++
T Consensus 96 ~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 96 GR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred HH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 65 4555666553 79999998 578877776666
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0018 Score=61.25 Aligned_cols=90 Identities=13% Similarity=0.058 Sum_probs=70.4
Q ss_pred ccCCchHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc-ccee--------------hccChhhHHHHHHHHhhC
Q 038599 232 SCRSGALEAIK-DLKSLGIKSFILAGDSHAAALYAQDQLDHAF-DMVY--------------AELLPQHKEELVELLKKD 295 (473)
Q Consensus 232 ~lr~~a~~~I~-~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~-~~v~--------------a~~~P~~K~~~v~~l~~~ 295 (473)
.++|++.+.|+ .+++.|++++++|+-....++.+++..++.. +++. .++--++|.+.++..-..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~ 173 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIGS 173 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHhCC
Confidence 46999999995 7898999999999999999999998855411 1111 113357999888765322
Q ss_pred C--cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 296 G--ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 296 g--~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
. ...+-||+.||.|+|+.||..++++
T Consensus 174 ~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 174 PLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 2 5678899999999999999999995
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0015 Score=71.11 Aligned_cols=57 Identities=18% Similarity=0.135 Sum_probs=45.6
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
+.++.-.|++++.- .+..-+.+.++|++|+++|+.+++.||.....+..+.+++|+.
T Consensus 417 KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 417 KIVYTDLDGTLLNP---LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred eEEEEECcCCCcCC---CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 56666778887531 2224457899999999999999999999999999999999864
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0013 Score=62.44 Aligned_cols=52 Identities=23% Similarity=0.203 Sum_probs=40.5
Q ss_pred eeeCCeEEEEEEecCc-cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 217 VYLGATPVGTFSLSDS-CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 217 va~d~~~lG~i~l~d~-lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
.-.||+++. .+. ..+.++++|++|+++|++++++||.+...+..+.+++|+.
T Consensus 4 ~DlDGTLL~----~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 4 SDLDGTLLD----SHSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EeCCCCCcC----CCCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 335666642 222 3345889999999999999999999999999999999876
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0017 Score=61.96 Aligned_cols=87 Identities=16% Similarity=0.223 Sum_probs=63.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hccC--hhhHHHHHHH-HhhCC----cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AELL--PQHKEELVEL-LKKDG----ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~~~--P~~K~~~v~~-l~~~g----~v~m 300 (473)
-.+.|++.+.++.|+++|+++.++|+-+...+...-+..|+.. +.++ ++-. +..+.++.+. +++.| .++|
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 171 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLF 171 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence 3578999999999999999999999988888888888888752 1222 1111 1112223332 33333 6999
Q ss_pred EcCCcccHHHHHHCCee
Q 038599 301 VGDGINDAPALAAVDIG 317 (473)
Q Consensus 301 vGDG~ND~~al~~Advg 317 (473)
|||..+|..+-++|++.
T Consensus 172 igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 172 IDDSEPILDAAAQFGIR 188 (224)
T ss_pred EcCCHHHHHHHHHcCCe
Confidence 99999999999999995
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.001 Score=66.32 Aligned_cols=90 Identities=13% Similarity=0.011 Sum_probs=72.1
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---ce--------------ehccChhhHHHHHHH
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---MV--------------YAELLPQHKEELVEL 291 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---~v--------------~a~~~P~~K~~~v~~ 291 (473)
..+++.|++.+++++|++.|++++++||.+...+..+.+.+|+... .+ .....|+-+...++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 5688999999999999999999999999999999999998887630 00 113345667777776
Q ss_pred HhhC--CcEEEEcCCcccHHHHHHCCeeE
Q 038599 292 LKKD--GATAMVGDGINDAPALAAVDIGI 318 (473)
Q Consensus 292 l~~~--g~v~mvGDG~ND~~al~~AdvgI 318 (473)
+... ..++||||..+|+.+.+.|++-.
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 5442 37999999999999999999853
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0018 Score=60.30 Aligned_cols=86 Identities=17% Similarity=0.101 Sum_probs=63.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-h----ccChhhH--HHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-A----ELLPQHK--EELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a----~~~P~~K--~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+++++|++.|+++.++|+-+........+++|+.. +.++ + ...|... ..+.+.+.-.. .++||
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~v 171 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFV 171 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEE
Confidence 468999999999999999999999999888889999999851 1222 1 1223211 23333333333 69999
Q ss_pred cCCcccHHHHHHCCee
Q 038599 302 GDGINDAPALAAVDIG 317 (473)
Q Consensus 302 GDG~ND~~al~~Advg 317 (473)
||+.+|..+-+++++-
T Consensus 172 gD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 172 ASNPWDLGGAKKFGFK 187 (198)
T ss_pred eCCHHHHHHHHHCCCc
Confidence 9999999999999884
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0021 Score=63.87 Aligned_cols=112 Identities=18% Similarity=0.201 Sum_probs=72.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC---Ccc-cee-hc----cCh--hhHHHHHHHHhhCC-cEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDH---AFD-MVY-AE----LLP--QHKEELVELLKKDG-ATA 299 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi---~~~-~v~-a~----~~P--~~K~~~v~~l~~~g-~v~ 299 (473)
++.|++.+.++.|++.|+++.++|+-+......+-+..+. ... .++ +. ..| +-=..+++.+.-.. .++
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 223 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCV 223 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEE
Confidence 5789999999999999999999999888877766665531 110 121 11 122 22233344444333 699
Q ss_pred EEcCCcccHHHHHHCCeeEEeCCCC--CccccccccEEEecCCcccHH
Q 038599 300 MVGDGINDAPALAAVDIGISMGISG--SALAMESGHVILMSNDIRKIP 345 (473)
Q Consensus 300 mvGDG~ND~~al~~AdvgIa~g~~~--~~~a~~~ad~vl~~~~l~~l~ 345 (473)
||||+.+|..+-++|++....-..+ .......+|+++ +++..+.
T Consensus 224 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l~ 269 (286)
T PLN02779 224 VVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDVP 269 (286)
T ss_pred EEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhcc
Confidence 9999999999999999854332122 221224578887 6665544
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0021 Score=60.67 Aligned_cols=113 Identities=12% Similarity=0.136 Sum_probs=75.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc-c----ChhhH--HHHHHHH-hhCC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE-L----LPQHK--EELVELL-KKDG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~-~----~P~~K--~~~v~~l-~~~g-~v~m 300 (473)
++.|++.+.+++|++. +++.++|+-.........+++|+.. +.+++. . .|+.. ...++.+ .-.. .++|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~ 175 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLM 175 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEE
Confidence 5689999999999999 9999999998888888899999852 233221 1 23222 2333334 2222 6999
Q ss_pred EcCCc-ccHHHHHHCCe-eEEeCC-CCCccccccccEEEecCCcccHHHH
Q 038599 301 VGDGI-NDAPALAAVDI-GISMGI-SGSALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 301 vGDG~-ND~~al~~Adv-gIa~g~-~~~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
|||.. +|..+-+.+++ +|.... ..++.....++.++ +++..+..+
T Consensus 176 igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 176 IGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred ECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 99998 89999999997 333321 11222233566666 666666543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0023 Score=71.82 Aligned_cols=141 Identities=16% Similarity=0.151 Sum_probs=96.5
Q ss_pred hhHHHHhcCCceeeEeeeCCeEEEEEEe--cCccCCchHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCCc--c--
Q 038599 202 SIAEAKCTGGKTRGYVYLGATPVGTFSL--SDSCRSGALEAIKDLKS-LGIKSFILAGDSHAAALYAQDQLDHAF--D-- 274 (473)
Q Consensus 202 ~~~~~~~~~G~~vi~va~d~~~lG~i~l--~d~lr~~a~~~I~~L~~-~gi~v~mlTGD~~~~a~~~a~~~gi~~--~-- 274 (473)
.....|.+...+.+++-.||+++....- ...+.+++.+++++|.+ .|+.++++||.+..........+++.- +
T Consensus 482 ~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG 561 (726)
T PRK14501 482 EIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHG 561 (726)
T ss_pred HHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCC
Confidence 3456666666788899999998764211 12356789999999999 599999999999988877665444211 0
Q ss_pred -----------------------------------------------cee------------------------------
Q 038599 275 -----------------------------------------------MVY------------------------------ 277 (473)
Q Consensus 275 -----------------------------------------------~v~------------------------------ 277 (473)
.++
T Consensus 562 ~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~ 641 (726)
T PRK14501 562 AWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLE 641 (726)
T ss_pred EEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 000
Q ss_pred -------hccCh--hhHHHHHHHHhhCC---cEEEEcCCcccHHHHHHC---CeeEEeCCCCCccccccccEEEecCCcc
Q 038599 278 -------AELLP--QHKEELVELLKKDG---ATAMVGDGINDAPALAAV---DIGISMGISGSALAMESGHVILMSNDIR 342 (473)
Q Consensus 278 -------a~~~P--~~K~~~v~~l~~~g---~v~mvGDG~ND~~al~~A---dvgIa~g~~~~~~a~~~ad~vl~~~~l~ 342 (473)
-++.| -+|...++.+.+.. .++++||+.||.+|++.+ +.+|++| ++ ..+|++.+ ++..
T Consensus 642 v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l--~~~~ 714 (726)
T PRK14501 642 VLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRL--PSQR 714 (726)
T ss_pred EEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeC--CCHH
Confidence 01112 36777777766542 699999999999999996 5889997 42 45688888 4445
Q ss_pred cHHHHHH
Q 038599 343 KIPKAIK 349 (473)
Q Consensus 343 ~l~~~i~ 349 (473)
.+..+++
T Consensus 715 eV~~~L~ 721 (726)
T PRK14501 715 EVRELLR 721 (726)
T ss_pred HHHHHHH
Confidence 5555443
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0037 Score=59.26 Aligned_cols=114 Identities=16% Similarity=0.164 Sum_probs=75.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehcc----Ch--hhHHHHHHHHhh-CC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAEL----LP--QHKEELVELLKK-DG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~----~P--~~K~~~v~~l~~-~g-~v~m 300 (473)
++.|++.+++++|+ .|+++.++|+.....+...-+++|+.. +.+ .++- .| +-=...++.+.- .. .+.|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~ 173 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM 173 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 46899999999999 689999999988888888888888852 122 2211 23 222333444432 22 6999
Q ss_pred EcCCc-ccHHHHHHCCee-EEeCCCCCc-cccccccEEEecCCcccHHHHH
Q 038599 301 VGDGI-NDAPALAAVDIG-ISMGISGSA-LAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 301 vGDG~-ND~~al~~Advg-Ia~g~~~~~-~a~~~ad~vl~~~~l~~l~~~i 348 (473)
|||.. +|..+-++|++- |.+...+.. .....+|+++ +++..+..++
T Consensus 174 vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 174 VGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred EcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 99998 799999999984 444312211 1122467777 6677766654
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0017 Score=60.79 Aligned_cols=51 Identities=24% Similarity=0.347 Sum_probs=41.2
Q ss_pred EeeeCCeEEEEEEecC--ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 038599 216 YVYLGATPVGTFSLSD--SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLD 270 (473)
Q Consensus 216 ~va~d~~~lG~i~l~d--~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~g 270 (473)
++-.|++++. .+ ++.+++.+++++|++.|++++++||.....+..+.+.++
T Consensus 3 ~~D~DgTL~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 3 FFDLDGTLLD----PNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred EEeCcCCCcC----CCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 4456777764 22 467899999999999999999999999999988887644
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0027 Score=58.16 Aligned_cols=91 Identities=10% Similarity=0.015 Sum_probs=66.1
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCC---------c--cc-eehccChhhH--HHHHHHHhh
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGD-SHAAALYAQDQLDHA---------F--DM-VYAELLPQHK--EELVELLKK 294 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD-~~~~a~~~a~~~gi~---------~--~~-v~a~~~P~~K--~~~v~~l~~ 294 (473)
+-++.|++.+.++.|+++|+++.++|+- ....+..+.+.+|+. . +. +.++-.+..| ..+.+.+.+
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~ 122 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK 122 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence 4457899999999999999999999975 888888898999875 1 12 2222211222 233454442
Q ss_pred C------C-cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 295 D------G-ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 295 ~------g-~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
. . .++||||...|+.+.++|++-...
T Consensus 123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 1 2 799999999999999999885543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0033 Score=55.80 Aligned_cols=86 Identities=26% Similarity=0.355 Sum_probs=59.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCcc-ceehc-----c--ChhhHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSH---------------AAALYAQDQLDHAFD-MVYAE-----L--LPQHKEEL 288 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~---------------~~a~~~a~~~gi~~~-~v~a~-----~--~P~~K~~~ 288 (473)
.+.|++.++++.|++.|+++.++|+.+. .....+.+.+|+... .++.. . ....+.++
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 3689999999999999999999998762 455667788888622 12211 0 01223333
Q ss_pred HHH-HhhCC----cEEEEcCCcccHHHHHHCCee
Q 038599 289 VEL-LKKDG----ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 289 v~~-l~~~g----~v~mvGDG~ND~~al~~Advg 317 (473)
++. +++.| .+.||||...|..+.+.+++-
T Consensus 107 ~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 107 ILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 333 23233 699999999999999998873
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0024 Score=57.12 Aligned_cols=88 Identities=23% Similarity=0.249 Sum_probs=66.3
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--cccee-hc----cCh--hhHHHHHHHHhhCC-cEE
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA--FDMVY-AE----LLP--QHKEELVELLKKDG-ATA 299 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~--~~~v~-a~----~~P--~~K~~~v~~l~~~g-~v~ 299 (473)
..++.|++.+.+++|++.|++++++|+.+........+++|+. .+.++ +. ..| +-=..+++.+.-.. .++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~ 154 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL 154 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence 4567899999999999999999999999999999999999987 22232 22 112 22233344443333 799
Q ss_pred EEcCCcccHHHHHHCCee
Q 038599 300 MVGDGINDAPALAAVDIG 317 (473)
Q Consensus 300 mvGDG~ND~~al~~Advg 317 (473)
||||...|..+-+.|++-
T Consensus 155 ~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 155 FVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEESSHHHHHHHHHTTSE
T ss_pred EEeCCHHHHHHHHHcCCe
Confidence 999999999999999873
|
... |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0025 Score=58.35 Aligned_cols=84 Identities=18% Similarity=0.098 Sum_probs=57.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-h----ccChh--hHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-A----ELLPQ--HKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a----~~~P~--~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.++++.|+++|+++.++|+... +....+.+|+.. +.++ + ...|. -=....+.+.-.. .++||
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~v 164 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGI 164 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 5789999999999999999999996432 456778888762 1221 1 11222 1122233333222 69999
Q ss_pred cCCcccHHHHHHCCee
Q 038599 302 GDGINDAPALAAVDIG 317 (473)
Q Consensus 302 GDG~ND~~al~~Advg 317 (473)
||..+|..+.+.+++-
T Consensus 165 gD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 165 EDAQAGIEAIKAAGMF 180 (185)
T ss_pred ecCHHHHHHHHHcCCE
Confidence 9999999999999883
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0031 Score=65.28 Aligned_cols=86 Identities=17% Similarity=0.132 Sum_probs=61.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCCc--ccee-hc----cC--hhhHHHHHHHHhhCC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQD-QLDHAF--DMVY-AE----LL--PQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~-~~gi~~--~~v~-a~----~~--P~~K~~~v~~l~~~g-~v~m 300 (473)
.+.|++.+.++.|++.|+++.++|+.....+....+ ..|+.. +.+. ++ .. |+-=..+++.+.-.. .++|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~ 172 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLV 172 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 467999999999999999999999998888776665 677742 1121 11 12 222233333443333 7999
Q ss_pred EcCCcccHHHHHHCCee
Q 038599 301 VGDGINDAPALAAVDIG 317 (473)
Q Consensus 301 vGDG~ND~~al~~Advg 317 (473)
|||..+|..+-+.|++.
T Consensus 173 VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 173 IEDSLPGVMAGKAAGME 189 (382)
T ss_pred EeCCHHHHHHHHHcCCE
Confidence 99999999999999984
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0023 Score=57.97 Aligned_cols=89 Identities=12% Similarity=0.109 Sum_probs=69.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC----CCccceehc------------------cChhhHHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLD----HAFDMVYAE------------------LLPQHKEELV 289 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~g----i~~~~v~a~------------------~~P~~K~~~v 289 (473)
.++|+.++.++.+++.+++++++|+-...-...+-++++ |..-.+.++ .--.+|...|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI 152 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVI 152 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhH
Confidence 478999999999999999999999888777777777766 321111110 0124899999
Q ss_pred HHHhhCC-cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 290 ELLKKDG-ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 290 ~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
+.|++.. .+.|+|||+.|..|.+..|+=.|-
T Consensus 153 ~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 153 HELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred HHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 9999987 899999999999999988876653
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0015 Score=62.38 Aligned_cols=76 Identities=17% Similarity=0.100 Sum_probs=47.3
Q ss_pred ccCchhHHHHHHHHHHHHHHHHh---hhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 038599 3 SQKKWPAPSVMASGLLLALSFLG---YIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAA 79 (473)
Q Consensus 3 ~~~~~~~~~~i~~~i~~~~~~~~---~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~la 79 (473)
++.+++.+++++.++++++..+. .......+....++++...|..+|...++ ++..++.+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~---------------~~~~~~~~~~ 216 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPL---------------SLAIAARRLA 216 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHH---------------HHHHHHHHHH
T ss_pred HHHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHH---------------HHHHHHHHHH
Confidence 34455555555555554432111 00011122444556666677777766555 8999999999
Q ss_pred HCCceeeCchHhhh
Q 038599 80 TTGLLVKGGDYLEI 93 (473)
Q Consensus 80 k~gilvk~~~~lE~ 93 (473)
++|+++|+++++|+
T Consensus 217 ~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 217 KNGIIVKNLSALEA 230 (230)
T ss_dssp HTTEEESSTTHHHH
T ss_pred HCCEEEeCcccccC
Confidence 99999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0035 Score=57.34 Aligned_cols=85 Identities=20% Similarity=0.117 Sum_probs=59.7
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-----ccChhhH--HHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-----ELLPQHK--EELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-----~~~P~~K--~~~v~~l~~~g-~v~m 300 (473)
-++.|++.++++.|++.|+++.++|+. ..+..+.+..|+.. +.+++ ...|... ....+.+.-.. .++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~ 164 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVV 164 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 468999999999999999999999986 55777888888751 12221 1123221 12222222222 6999
Q ss_pred EcCCcccHHHHHHCCee
Q 038599 301 VGDGINDAPALAAVDIG 317 (473)
Q Consensus 301 vGDG~ND~~al~~Advg 317 (473)
|||..+|..+-+.|++.
T Consensus 165 IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 165 FEDALAGVQAARAAGMF 181 (185)
T ss_pred EeCcHhhHHHHHHCCCe
Confidence 99999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0087 Score=55.88 Aligned_cols=57 Identities=21% Similarity=0.195 Sum_probs=45.6
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF 273 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~ 273 (473)
.+++.-.|+++++ -+. --..+.+.+.+|+++|++|+.+|......-....+.+|+..
T Consensus 8 ~lIFtDlD~TLl~-~~y---e~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 8 LLIFTDLDGTLLP-HSY---EWQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred eEEEEcccCcccC-CCC---CCCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 4667777888776 222 13467889999999999999999999999999999999873
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.011 Score=53.87 Aligned_cols=105 Identities=16% Similarity=0.106 Sum_probs=67.9
Q ss_pred eeeEeeeCCeEEEEEE----ecCc-----cCCchHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHcCC
Q 038599 213 TRGYVYLGATPVGTFS----LSDS-----CRSGALEAIKDLKSLGIKSFILAGDSHA------------AALYAQDQLDH 271 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~----l~d~-----lr~~a~~~I~~L~~~gi~v~mlTGD~~~------------~a~~~a~~~gi 271 (473)
+.+++-.|++++-.-. ..++ +-|++.+++++|+++|+++.++|..+.. ....+.+.+|+
T Consensus 14 k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl 93 (166)
T TIGR01664 14 KVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV 93 (166)
T ss_pred cEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 4566677887764211 1111 3489999999999999999999975542 45677889998
Q ss_pred Ccccee-hcc----Ch--hhHHHHHHHHh--hCC-cEEEEcCCc--------ccHHHHHHCCee
Q 038599 272 AFDMVY-AEL----LP--QHKEELVELLK--KDG-ATAMVGDGI--------NDAPALAAVDIG 317 (473)
Q Consensus 272 ~~~~v~-a~~----~P--~~K~~~v~~l~--~~g-~v~mvGDG~--------ND~~al~~Advg 317 (473)
....+. ++- .| +-=..+++.+. -.. .+.||||.. +|..+-++|++-
T Consensus 94 ~~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 94 PIQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred CEEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 642222 111 22 22233344443 222 699999986 699998888764
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0081 Score=54.64 Aligned_cols=84 Identities=17% Similarity=0.122 Sum_probs=59.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehcc----C--hhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAEL----L--PQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~----~--P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.. +.+ .++- . |+-=..+.+.+.... .+.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~v 163 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFV 163 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEE
Confidence 578999999999999999999999888777 66666688852 122 2211 2 222233333333333 79999
Q ss_pred cCCcccHHHHHHCCe
Q 038599 302 GDGINDAPALAAVDI 316 (473)
Q Consensus 302 GDG~ND~~al~~Adv 316 (473)
||...|..+-+++++
T Consensus 164 gD~~~di~aA~~~G~ 178 (183)
T TIGR01509 164 DDSPAGIEAAKAAGM 178 (183)
T ss_pred cCCHHHHHHHHHcCC
Confidence 999999999998887
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0069 Score=54.82 Aligned_cols=86 Identities=23% Similarity=0.254 Sum_probs=59.9
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCccce-eh-----ccC--hhhHHHHH
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGD---------------SHAAALYAQDQLDHAFDMV-YA-----ELL--PQHKEELV 289 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD---------------~~~~a~~~a~~~gi~~~~v-~a-----~~~--P~~K~~~v 289 (473)
+-|++.+++++|+++|++++++|.- .......+.+.+|+.-+.+ ++ +-. ...|..++
T Consensus 30 ~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~~~~~ 109 (161)
T TIGR01261 30 FEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPKIKLL 109 (161)
T ss_pred ECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCCHHHH
Confidence 5689999999999999999999974 2445677788888863323 22 111 11233333
Q ss_pred HHH-hhCC----cEEEEcCCcccHHHHHHCCeeE
Q 038599 290 ELL-KKDG----ATAMVGDGINDAPALAAVDIGI 318 (473)
Q Consensus 290 ~~l-~~~g----~v~mvGDG~ND~~al~~AdvgI 318 (473)
+.+ ++.+ .+.||||+.+|..+.+.+++-.
T Consensus 110 ~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 110 EPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred HHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 333 2222 6999999999999999999843
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.016 Score=52.25 Aligned_cols=88 Identities=23% Similarity=0.218 Sum_probs=63.5
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHH-----cCCCcccee--------------hccChhh-HH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAAL---YAQDQ-----LDHAFDMVY--------------AELLPQH-KE 286 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~---~~a~~-----~gi~~~~v~--------------a~~~P~~-K~ 286 (473)
+|...|++.+++++++++|++++.+||.....+. ...++ .+++...++ -.-.|++ |.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~ 104 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKI 104 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHH
Confidence 3677899999999999999999999999988774 44555 234321111 0123444 88
Q ss_pred HHHHHHhh----CC--cEEEEcCCcccHHHHHHCCee
Q 038599 287 ELVELLKK----DG--ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 287 ~~v~~l~~----~g--~v~mvGDG~ND~~al~~Advg 317 (473)
+.++.+++ ++ .++..||+.+|..+.+++++-
T Consensus 105 ~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 105 ACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 88887776 24 467799999999999987763
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0073 Score=58.53 Aligned_cols=53 Identities=17% Similarity=0.089 Sum_probs=41.4
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQD 267 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~ 267 (473)
.+.+++-.||+++. =..++.+.++++|++++++|+++++.||.+........+
T Consensus 5 ~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 5 KTILLFDVDGTLTK---PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 45667777888752 223478889999999999999999999999886655443
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0067 Score=57.61 Aligned_cols=87 Identities=15% Similarity=0.106 Sum_probs=57.6
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHcCCCc---cceehc------c--ChhhHHHHHHHHh---hC
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALY-AQDQLDHAF---DMVYAE------L--LPQHKEELVELLK---KD 295 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~-~a~~~gi~~---~~v~a~------~--~P~~K~~~v~~l~---~~ 295 (473)
-++.|++.+.++.|++.|+++.++||-....... ..+..++.. ..+.++ . .|+-=...++.+. -.
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 156 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVD 156 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCC
Confidence 4568999999999999999999999877643332 322234421 122222 1 1222234445553 22
Q ss_pred C-cEEEEcCCcccHHHHHHCCee
Q 038599 296 G-ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 296 g-~v~mvGDG~ND~~al~~Advg 317 (473)
. .++||||...|..+-+.|++-
T Consensus 157 ~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 157 PGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred ccceEEEeccHhhHHHHHHCCCe
Confidence 2 699999999999999999983
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0086 Score=57.94 Aligned_cols=62 Identities=26% Similarity=0.340 Sum_probs=44.3
Q ss_pred hhhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHHC--------CeeEEeCCCCCccccccccEEEecCCcccHHHHH
Q 038599 282 PQHKEELVELLKKD----G-ATAMVGDGINDAPALAAV--------DIGISMGISGSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 282 P~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~A--------dvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
+.+|...++.+.++ . .++|+||+.||..+++.+ ..++.++ .+. .+..|++++ ++...+...+
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~--~~~~~v~~~L 239 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHL--TGPQQVLEFL 239 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeC--CCHHHHHHHH
Confidence 34677777766543 2 699999999999999998 4788884 332 345688888 5666665554
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.012 Score=59.94 Aligned_cols=87 Identities=20% Similarity=0.242 Sum_probs=60.9
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCccceehc------c--ChhhHHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGD---------------SHAAALYAQDQLDHAFDMVYAE------L--LPQHKEE 287 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD---------------~~~~a~~~a~~~gi~~~~v~a~------~--~P~~K~~ 287 (473)
-.+.|++.+++++|+++|+++.++|+- .......+.+..|+.-+.++.. - ....|..
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~sd~~~~rKP~p~ 108 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFPEDNCSCRKPKTG 108 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcCcccCCCCCCCHH
Confidence 457899999999999999999999983 2344666778888753333211 1 1123343
Q ss_pred HHHHH-hhC----CcEEEEcCCcccHHHHHHCCee
Q 038599 288 LVELL-KKD----GATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 288 ~v~~l-~~~----g~v~mvGDG~ND~~al~~Advg 317 (473)
.+..+ ++. ..+.||||+.+|..+-+.|++-
T Consensus 109 ~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 109 LVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 44433 222 2799999999999999999984
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.003 Score=56.29 Aligned_cols=89 Identities=18% Similarity=0.024 Sum_probs=64.7
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---ccee-hccChhhHHHHHHHHhhCC----cEEEE
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMVY-AELLPQHKEELVELLKKDG----ATAMV 301 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v~-a~~~P~~K~~~v~~l~~~g----~v~mv 301 (473)
.-.+||++.+.++.|+ .++++.+.|.-+...+..+.+.+|+.. +.++ .+-....|-.+.+.++..| .+.||
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i 121 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIII 121 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEE
Confidence 3457999999999999 579999999999999999999998852 1222 2222223333555555443 79999
Q ss_pred cCCcccHHHHHHCCeeEE
Q 038599 302 GDGINDAPALAAVDIGIS 319 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa 319 (473)
||..+|..+-+++.+-|.
T Consensus 122 ~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 122 DDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ECCHHHhhcCccCEEEec
Confidence 999999988777766554
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.028 Score=57.79 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=44.1
Q ss_pred HHHHhcCCceeeEeeeCCeEEEEEEecCc--cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 038599 204 AEAKCTGGKTRGYVYLGATPVGTFSLSDS--CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ 266 (473)
Q Consensus 204 ~~~~~~~G~~vi~va~d~~~lG~i~l~d~--lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a 266 (473)
+..+.+...+++++-+||++.-+..--|. +-++.++++++|.+. .++.++||.......++.
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l 174 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELV 174 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHh
Confidence 34455555678888999998765522111 355888999999887 589999999877765543
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.012 Score=54.81 Aligned_cols=84 Identities=19% Similarity=0.173 Sum_probs=57.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-----ccChhh--HHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-----ELLPQH--KEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-----~~~P~~--K~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.++++.|++.|+++.++|+-... .....+.+|+.. +.++. ...|+. =..+++.+.-.. .++||
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~I 183 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHI 183 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEE
Confidence 56799999999999999999999976543 467778888852 12221 112321 122233333223 79999
Q ss_pred cCCc-ccHHHHHHCCe
Q 038599 302 GDGI-NDAPALAAVDI 316 (473)
Q Consensus 302 GDG~-ND~~al~~Adv 316 (473)
||.. +|..+-++|++
T Consensus 184 gD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 184 GDSLRNDYQGARAAGW 199 (203)
T ss_pred CCCchHHHHHHHHcCC
Confidence 9997 89999888876
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.012 Score=59.46 Aligned_cols=105 Identities=16% Similarity=0.085 Sum_probs=75.6
Q ss_pred eeEeeeCCeEEEEEEecC--------ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCccceehc--
Q 038599 214 RGYVYLGATPVGTFSLSD--------SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ----LDHAFDMVYAE-- 279 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d--------~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~----~gi~~~~v~a~-- 279 (473)
++.+-.|+++.|-+.-+| ++.+++.+++++|+++|+.+.++|.-+...+..+-++ +|+. ..|..
T Consensus 5 ~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~--~~f~~~~ 82 (320)
T TIGR01686 5 VLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQA--EDFDARS 82 (320)
T ss_pred EEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcH--HHeeEEE
Confidence 344444555544333333 3568999999999999999999999999999999998 8876 32222
Q ss_pred cChhhHHHHHHHHhhC---C--cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 280 LLPQHKEELVELLKKD---G--ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 280 ~~P~~K~~~v~~l~~~---g--~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
..++.|...++.+.++ + .++||||...|..+.+++...+.+
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 3344566655554332 2 799999999999999998877644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.028 Score=54.19 Aligned_cols=99 Identities=11% Similarity=0.040 Sum_probs=64.9
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHcCCCccceehc-cChhh-HHH
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAAL--YAQDQLDHAFDMVYAE-LLPQH-KEE 287 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~--~~a~~~gi~~~~v~a~-~~P~~-K~~ 287 (473)
++.+.+-.|+++ .-.+.+-|++.+++++|+++|+++.++|.-...... ...+++|+..+ .+.. .++++ ...
T Consensus 8 ~~~~~~D~dG~l----~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~-~~~~Ii~s~~~~~~ 82 (242)
T TIGR01459 8 YDVFLLDLWGVI----IDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINAD-LPEMIISSGEIAVQ 82 (242)
T ss_pred CCEEEEeccccc----ccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcc-ccceEEccHHHHHH
Confidence 445555556544 346778999999999999999999999986655444 56689999741 1212 22222 112
Q ss_pred HHHH-HhhC---C-cEEEEcCCcccHHHHHHCC
Q 038599 288 LVEL-LKKD---G-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 288 ~v~~-l~~~---g-~v~mvGDG~ND~~al~~Ad 315 (473)
.++. +++. + .+.|+||+.+|...+...+
T Consensus 83 ~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 83 MILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred HHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 3332 2322 3 6999999999988875443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.017 Score=51.23 Aligned_cols=83 Identities=24% Similarity=0.268 Sum_probs=56.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc--cChhhHHHHHHH-HhhCC---cEEEEcC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE--LLPQHKEELVEL-LKKDG---ATAMVGD 303 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~--~~P~~K~~~v~~-l~~~g---~v~mvGD 303 (473)
...+++.+.++.|++.|+++.++|+-....+....+.. +.. +.++.. ..+..+.+.+.. +++.| .++||||
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~~~l~iGD 142 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPPEVLHVGD 142 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCCCEEEEeC
Confidence 34589999999999999999999999988888877774 321 112211 111122233332 23223 6999999
Q ss_pred CcccHHHHHHCC
Q 038599 304 GINDAPALAAVD 315 (473)
Q Consensus 304 G~ND~~al~~Ad 315 (473)
..+|..+-++|+
T Consensus 143 s~~Di~aa~~aG 154 (154)
T TIGR01549 143 NLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHcc
Confidence 999999888764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.052 Score=52.97 Aligned_cols=55 Identities=18% Similarity=0.270 Sum_probs=38.9
Q ss_pred eEeeeCCeEEEEEEecCc----cCCchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCc
Q 038599 215 GYVYLGATPVGTFSLSDS----CRSGALEAIKDLKSLGIKSFILAGDSHAA---ALYAQDQLDHAF 273 (473)
Q Consensus 215 i~va~d~~~lG~i~l~d~----lr~~a~~~I~~L~~~gi~v~mlTGD~~~~---a~~~a~~~gi~~ 273 (473)
+.+-.||++. -.+. +-|++.++|++|+++|++++++||.+..+ .....+++|++.
T Consensus 4 i~~D~DGtl~----~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 4 VLLDISGVLY----ISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred EEEeCCCeEE----eCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 3444565553 4455 78899999999999999999999876554 444445567653
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.02 Score=52.07 Aligned_cols=105 Identities=15% Similarity=0.083 Sum_probs=82.4
Q ss_pred HhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCC--eEEEEcCC-------CHHHHHHHHHHcCCCccce-
Q 038599 207 KCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGI--KSFILAGD-------SHAAALYAQDQLDHAFDMV- 276 (473)
Q Consensus 207 ~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi--~v~mlTGD-------~~~~a~~~a~~~gi~~~~v- 276 (473)
+.+.|.+.+.+-.|+++.. --++++.|+..+.+++|++.+. ++.++|.- +...|+.+.+.+|++ .+
T Consensus 36 Lk~~Gik~li~DkDNTL~~--~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--vl~ 111 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTP--PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--VLR 111 (168)
T ss_pred hhhcCceEEEEcCCCCCCC--CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--EEE
Confidence 5677888888888887532 2467788999999999999976 49999975 478999999999997 44
Q ss_pred ehccChhhHHHHHHHHhhC-----C-cEEEEcCC-cccHHHHHHCC
Q 038599 277 YAELLPQHKEELVELLKKD-----G-ATAMVGDG-INDAPALAAVD 315 (473)
Q Consensus 277 ~a~~~P~~K~~~v~~l~~~-----g-~v~mvGDG-~ND~~al~~Ad 315 (473)
|....|....++.+.++.+ . .++||||- ..|..+-...+
T Consensus 112 h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 112 HRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred eCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 5567898778888888754 3 79999997 67877655544
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.023 Score=54.21 Aligned_cols=90 Identities=14% Similarity=0.106 Sum_probs=62.3
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCc--cceeh---ccCh--hhHHHHHHHHhhCC-c
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL---DHAF--DMVYA---ELLP--QHKEELVELLKKDG-A 297 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~---gi~~--~~v~a---~~~P--~~K~~~v~~l~~~g-~ 297 (473)
++-++.||+.+++++|+++|+++.++|..+......+-+.. ++.. +.+|. ...| +-=..+++.+.-.. .
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e 171 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPRE 171 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhH
Confidence 45678999999999999999999999998877666665554 2221 01221 1122 22233344443333 6
Q ss_pred EEEEcCCcccHHHHHHCCeeE
Q 038599 298 TAMVGDGINDAPALAAVDIGI 318 (473)
Q Consensus 298 v~mvGDG~ND~~al~~AdvgI 318 (473)
++|+||...|+.|-++|++-.
T Consensus 172 ~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 172 ILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred EEEEeCCHHHHHHHHHcCCEE
Confidence 999999999999999999843
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.022 Score=55.73 Aligned_cols=81 Identities=22% Similarity=0.261 Sum_probs=59.3
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCc---cceehccChhhHHHHHHHHhhC-CcEEEEc
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSH---AAALYAQDQLDHAF---DMVYAELLPQHKEELVELLKKD-GATAMVG 302 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~---~~a~~~a~~~gi~~---~~v~a~~~P~~K~~~v~~l~~~-g~v~mvG 302 (473)
..++-|++.+.++.|++.|++++++|+... ..+....++.|++. +.++.+-....|....+.+.+. +.++|+|
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~Ivl~vG 195 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEIVLLFG 195 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCEEEEEC
Confidence 345679999999999999999999999763 34446667899963 2444443334566666666544 3799999
Q ss_pred CCcccHHH
Q 038599 303 DGINDAPA 310 (473)
Q Consensus 303 DG~ND~~a 310 (473)
|-.+|...
T Consensus 196 D~~~Df~~ 203 (266)
T TIGR01533 196 DNLLDFDD 203 (266)
T ss_pred CCHHHhhh
Confidence 99999754
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.022 Score=54.43 Aligned_cols=79 Identities=20% Similarity=0.221 Sum_probs=58.8
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCc-cceehcc-Chhh------HHHHHHHHhhCC--
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAA---ALYAQDQLDHAF-DMVYAEL-LPQH------KEELVELLKKDG-- 296 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~---a~~~a~~~gi~~-~~v~a~~-~P~~------K~~~v~~l~~~g-- 296 (473)
.-+.-|++.++++.++++|++|+++||..... +..--++.|++. +.++-+- .... |...-+.+.++|
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYr 197 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYR 197 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCce
Confidence 34667899999999999999999999999755 445556788873 3333322 1112 777777888888
Q ss_pred cEEEEcCCcccH
Q 038599 297 ATAMVGDGINDA 308 (473)
Q Consensus 297 ~v~mvGDG~ND~ 308 (473)
.++.+||..+|.
T Consensus 198 Iv~~iGDq~sDl 209 (229)
T TIGR01675 198 IWGNIGDQWSDL 209 (229)
T ss_pred EEEEECCChHHh
Confidence 689999999995
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.027 Score=48.85 Aligned_cols=82 Identities=13% Similarity=0.079 Sum_probs=56.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcC-------CCc---cceehccCh--hhHHHHHHHHh--hCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGD-SHAAALYAQDQLD-------HAF---DMVYAELLP--QHKEELVELLK--KDG 296 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD-~~~~a~~~a~~~g-------i~~---~~v~a~~~P--~~K~~~v~~l~--~~g 296 (473)
++.+++.+.+++|+++|+++.++|+- ....+..+-+..| +.. ..+.++-.| +.=...++.+. -..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p 108 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKP 108 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCc
Confidence 57899999999999999999999999 7777777777777 321 012221223 22233334444 333
Q ss_pred -cEEEEcCCcccHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAA 313 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~ 313 (473)
.++|+||...|..+++.
T Consensus 109 ~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 109 KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ceEEEECCCHhHHHHHHh
Confidence 79999999988776653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.033 Score=64.93 Aligned_cols=110 Identities=20% Similarity=0.206 Sum_probs=76.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---ccee-h----ccCh--hhHHHHHHHHhhCC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMVY-A----ELLP--QHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v~-a----~~~P--~~K~~~v~~l~~~g-~v~m 300 (473)
.+.|++.+.+++|+++|+++.++|+-....+...-+++|+.. +.++ + +..| +-=...++.+.-.. .++|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~ 240 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVV 240 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEE
Confidence 367999999999999999999999999999888889999851 2221 1 1223 22233344443333 6999
Q ss_pred EcCCcccHHHHHHCCe-eEEeCCCC---CccccccccEEEecCCcccH
Q 038599 301 VGDGINDAPALAAVDI-GISMGISG---SALAMESGHVILMSNDIRKI 344 (473)
Q Consensus 301 vGDG~ND~~al~~Adv-gIa~g~~~---~~~a~~~ad~vl~~~~l~~l 344 (473)
|||..+|+.+-+.|++ .|.+. .+ .+.....+|+++ +++..+
T Consensus 241 IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~~a~~vi--~~l~el 285 (1057)
T PLN02919 241 IEDALAGVQAARAAGMRCIAVT-TTLSEEILKDAGPSLIR--KDIGNI 285 (1057)
T ss_pred EcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhCCCCEEE--CChHHC
Confidence 9999999999999998 34343 22 223345677888 556553
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.047 Score=53.04 Aligned_cols=47 Identities=11% Similarity=0.130 Sum_probs=37.7
Q ss_pred EEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---cCCC
Q 038599 226 TFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ---LDHA 272 (473)
Q Consensus 226 ~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~---~gi~ 272 (473)
++.-.+.+-|++.+++++|+++|++++++|+....+...++++ +|++
T Consensus 11 tL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 11 VLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred ceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3445678889999999999999999999999988776666555 5663
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.06 Score=61.23 Aligned_cols=67 Identities=15% Similarity=0.068 Sum_probs=50.7
Q ss_pred hhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHH
Q 038599 202 SIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDL-KSLGIKSFILAGDSHAAALYAQDQ 268 (473)
Q Consensus 202 ~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L-~~~gi~v~mlTGD~~~~a~~~a~~ 268 (473)
.....|.+...+.+++-.||+++-.-.....+.++..+++++| ++.|..++++||....+...+-..
T Consensus 586 ~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred HHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 3456676667788999999998743322335567899999997 777999999999998888766543
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.025 Score=54.88 Aligned_cols=45 Identities=24% Similarity=0.333 Sum_probs=35.6
Q ss_pred hhhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCcc
Q 038599 282 PQHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSAL 327 (473)
Q Consensus 282 P~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~ 327 (473)
...|...++.|+++ + .|..+||+.||.+||..++-||.++ ++.+.
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 35899999988866 2 6888999999999999999999998 55544
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.027 Score=46.74 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=51.3
Q ss_pred EecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCCcc--ceehccChhhHHHHHHHHhh--CC-cEE
Q 038599 228 SLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ---DQLDHAFD--MVYAELLPQHKEELVELLKK--DG-ATA 299 (473)
Q Consensus 228 ~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a---~~~gi~~~--~v~a~~~P~~K~~~v~~l~~--~g-~v~ 299 (473)
...+.+-|++.++|++|+++|.+++++|.....+...++ +.+|+..+ +++. |. ....+.|++ .+ +|.
T Consensus 10 ~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~t---s~--~~~~~~l~~~~~~~~v~ 84 (101)
T PF13344_consen 10 YNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIIT---SG--MAAAEYLKEHKGGKKVY 84 (101)
T ss_dssp EETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEE---HH--HHHHHHHHHHTTSSEEE
T ss_pred EeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEC---hH--HHHHHHHHhcCCCCEEE
Confidence 357888999999999999999999999988754433333 67888632 2222 21 123344544 23 899
Q ss_pred EEcCCcccHHHHHHCCe
Q 038599 300 MVGDGINDAPALAAVDI 316 (473)
Q Consensus 300 mvGDG~ND~~al~~Adv 316 (473)
.+|.. .....++.+++
T Consensus 85 vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 85 VLGSD-GLREELREAGF 100 (101)
T ss_dssp EES-H-HHHHHHHHTTE
T ss_pred EEcCH-HHHHHHHHcCC
Confidence 99864 44556666553
|
... |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.18 Score=51.48 Aligned_cols=58 Identities=14% Similarity=0.061 Sum_probs=45.2
Q ss_pred hcCCceeeEeeeCCeEEEEEEecC--ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 038599 208 CTGGKTRGYVYLGATPVGTFSLSD--SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ 266 (473)
Q Consensus 208 ~~~G~~vi~va~d~~~lG~i~l~d--~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a 266 (473)
.+....++++-.||+++-+..-.| .+-++..++|++|+ .|+.+.++||........+.
T Consensus 107 ~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 107 SRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred hcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 344456777889999986665333 36789999999999 78999999999988887664
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.054 Score=52.01 Aligned_cols=80 Identities=24% Similarity=0.343 Sum_probs=61.3
Q ss_pred ccCCchHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ceehc---------------------cCh--hh
Q 038599 232 SCRSGALEAIKDL--KSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVYAE---------------------LLP--QH 284 (473)
Q Consensus 232 ~lr~~a~~~I~~L--~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~a~---------------------~~P--~~ 284 (473)
|+.|+.+++++.+ ++.|+.++++|--|..--..+-+.-|+... .|+++ .-| -=
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmC 150 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMC 150 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccc
Confidence 5678999999999 457999999999999999999999998632 12222 113 26
Q ss_pred HHHHHHHHhhC----C----cEEEEcCCccc-HHHH
Q 038599 285 KEELVELLKKD----G----ATAMVGDGIND-APAL 311 (473)
Q Consensus 285 K~~~v~~l~~~----g----~v~mvGDG~ND-~~al 311 (473)
|..+++.+++. | +|.+||||.|| +|++
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 88899888764 3 79999999999 4443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.032 Score=52.32 Aligned_cols=87 Identities=22% Similarity=0.181 Sum_probs=55.4
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHcCCCc--cceehc-----cChhhH--HHHHHHHhhCC-cE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAA--ALYAQDQLDHAF--DMVYAE-----LLPQHK--EELVELLKKDG-AT 298 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~--a~~~a~~~gi~~--~~v~a~-----~~P~~K--~~~v~~l~~~g-~v 298 (473)
-++.|++.+.++.|+++|+++.++|+..... ........++.. +.++.. ..|+.. ...++.+.-.. .+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~ 172 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEEC 172 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 3568999999999999999999999865432 222222334421 122211 133322 22333333333 69
Q ss_pred EEEcCCcccHHHHHHCCee
Q 038599 299 AMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 299 ~mvGDG~ND~~al~~Advg 317 (473)
+||||...|..+-++|++-
T Consensus 173 l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 173 VFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred EEEcCCHHHHHHHHHcCCE
Confidence 9999999999999999883
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.068 Score=53.69 Aligned_cols=109 Identities=11% Similarity=0.038 Sum_probs=69.7
Q ss_pred HHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCCcc--ceeh
Q 038599 204 AEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ---DQLDHAFD--MVYA 278 (473)
Q Consensus 204 ~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a---~~~gi~~~--~v~a 278 (473)
+.++.. .+..+.+-.||++. -.+.+-|++.++|++|+++|++++++|+....+...+. +++|+... .++.
T Consensus 21 ~~~~~~-~~~~~~~D~DGtl~----~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~t 95 (311)
T PLN02645 21 ADELID-SVETFIFDCDGVIW----KGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFS 95 (311)
T ss_pred HHHHHH-hCCEEEEeCcCCeE----eCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEee
Confidence 344443 36677777787764 35677799999999999999999999999966665555 56887521 2322
Q ss_pred ccChhhHHHHHHHHhh-CCcEEEEcCCcccHHHHHHCCeeEE
Q 038599 279 ELLPQHKEELVELLKK-DGATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 279 ~~~P~~K~~~v~~l~~-~g~v~mvGDG~ND~~al~~AdvgIa 319 (473)
.. .....+++...- .+.-.++++...|...++.+++=..
T Consensus 96 s~--~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~ 135 (311)
T PLN02645 96 SS--FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYL 135 (311)
T ss_pred hH--HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEe
Confidence 21 112222222221 1234566666788899998887543
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.079 Score=49.12 Aligned_cols=84 Identities=19% Similarity=0.125 Sum_probs=54.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc------cce-ehccChhhHHHHHH-HHhhCC--cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF------DMV-YAELLPQHKEELVE-LLKKDG--ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~------~~v-~a~~~P~~K~~~v~-~l~~~g--~v~mv 301 (473)
.+.|++.+++++|++.+ +.+++|.-+........+.+|+.. +.+ .++... .|.+++. .+++.| .++||
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~-~kp~~~~~a~~~~~~~~~v~v 151 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDE-SKEKLFIKAKEKYGDRVVCFV 151 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCc-ccHHHHHHHHHHhCCCcEEEe
Confidence 46899999999999975 566677655444444556666641 011 122221 2344444 333335 68999
Q ss_pred cCCcccHHHHHHC--Cee
Q 038599 302 GDGINDAPALAAV--DIG 317 (473)
Q Consensus 302 GDG~ND~~al~~A--dvg 317 (473)
||..+|..+-++| ++-
T Consensus 152 gDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 152 DDLAHNLDAAHEALSQLP 169 (197)
T ss_pred CCCHHHHHHHHHHHcCCc
Confidence 9999999999999 983
|
2 hypothetical protein; Provisional |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.095 Score=48.80 Aligned_cols=87 Identities=13% Similarity=0.231 Sum_probs=55.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCc--ccee-h----ccChh--hHHHHHHHHhhCC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ-LDHAF--DMVY-A----ELLPQ--HKEELVELLKKDG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~-~gi~~--~~v~-a----~~~P~--~K~~~v~~l~~~g-~v~m 300 (473)
++.|++.+++++|++.|+++.++|+-+.......... .++.. +.++ + ...|. -=..+++.+.-.. .+.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 4689999999999999999999998776654433222 23321 1121 1 11232 2122233333222 6999
Q ss_pred EcCCcccHHHHHHCCeeE
Q 038599 301 VGDGINDAPALAAVDIGI 318 (473)
Q Consensus 301 vGDG~ND~~al~~AdvgI 318 (473)
|||...|..+-+++++-.
T Consensus 164 vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 164 FDDNADNIEAANALGITS 181 (199)
T ss_pred eCCCHHHHHHHHHcCCEE
Confidence 999999999999998843
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.2 Score=48.60 Aligned_cols=56 Identities=11% Similarity=0.031 Sum_probs=42.2
Q ss_pred eeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCCc
Q 038599 214 RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG---DSHAAALYAQDQLDHAF 273 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTG---D~~~~a~~~a~~~gi~~ 273 (473)
.+++-.||++. -.+.+-|++.++|++|+++|++++++|| ..........+++|++.
T Consensus 3 ~~~~D~DGtl~----~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 3 GYLIDLDGTMY----KGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred EEEEeCCCceE----cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 34455566654 4566778999999999999999999996 55666666677777754
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.13 Score=47.03 Aligned_cols=82 Identities=17% Similarity=0.085 Sum_probs=58.5
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-c------cChhhHHHHHHHHhhCC-cEEEEcC
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-E------LLPQHKEELVELLKKDG-ATAMVGD 303 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-~------~~P~~K~~~v~~l~~~g-~v~mvGD 303 (473)
.| ..+.++.|++. ++..++|+.....+...-++.|+.. +.+.+ + ..|+-=....+.+.... .+.||||
T Consensus 90 ~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igD 167 (188)
T PRK10725 90 LP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFED 167 (188)
T ss_pred cc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEec
Confidence 44 46899999875 8999999999999999999999862 12221 1 12222333344444333 6999999
Q ss_pred CcccHHHHHHCCee
Q 038599 304 GINDAPALAAVDIG 317 (473)
Q Consensus 304 G~ND~~al~~Advg 317 (473)
..+|..+-+.|++-
T Consensus 168 s~~di~aA~~aG~~ 181 (188)
T PRK10725 168 ADFGIQAARAAGMD 181 (188)
T ss_pred cHhhHHHHHHCCCE
Confidence 99999999999883
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.15 Score=48.17 Aligned_cols=87 Identities=9% Similarity=0.037 Sum_probs=60.3
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---cee-hcc----C--hhhHHHHHHHHhhCC-cEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---MVY-AEL----L--PQHKEELVELLKKDG-ATA 299 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---~v~-a~~----~--P~~K~~~v~~l~~~g-~v~ 299 (473)
-++.|++.++++.| ++++.++|+.....+...-++.|+... .+. ++- . |+-=....+.+.-.. .++
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 35678999999988 489999999998888888888888621 121 211 1 222222333333223 699
Q ss_pred EEcCCcccHHHHHHCCeeEEe
Q 038599 300 MVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 300 mvGDG~ND~~al~~AdvgIa~ 320 (473)
||||..+|..+-++|++....
T Consensus 164 ~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEE
Confidence 999999999999999986653
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.11 Score=47.67 Aligned_cols=83 Identities=16% Similarity=0.115 Sum_probs=58.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc---------cChh--hHHHHHHHHhhCC-c
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE---------LLPQ--HKEELVELLKKDG-A 297 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~---------~~P~--~K~~~v~~l~~~g-~ 297 (473)
++.+++.+++++|+ .+++++|+-+...+....+++|+.. +.+++. ..|. -=..+++.+.... .
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 36789999999987 4789999998889999999999852 122221 1332 2233333443333 6
Q ss_pred EEEEcCCcccHHHHHHCCee
Q 038599 298 TAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 298 v~mvGDG~ND~~al~~Advg 317 (473)
++||||...|..+-+.+++-
T Consensus 161 ~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCE
Confidence 89999999999999998874
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.068 Score=51.27 Aligned_cols=80 Identities=24% Similarity=0.273 Sum_probs=58.3
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCc-cceehccC--------hhhHHHHHHHHhhCC--
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSH---AAALYAQDQLDHAF-DMVYAELL--------PQHKEELVELLKKDG-- 296 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~---~~a~~~a~~~gi~~-~~v~a~~~--------P~~K~~~v~~l~~~g-- 296 (473)
++.-|++.+.++.++++|++|+.+||.+. ..+..-.++.|+.. +.++-+.. .+.|...-+.++++|
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~ 193 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR 193 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCc
Confidence 34567899999999999999999998764 34445567788764 33332221 124888888898997
Q ss_pred cEEEEcCCcccHHH
Q 038599 297 ATAMVGDGINDAPA 310 (473)
Q Consensus 297 ~v~mvGDG~ND~~a 310 (473)
.++++||..+|...
T Consensus 194 Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 194 IIANIGDQLSDFSG 207 (229)
T ss_dssp EEEEEESSGGGCHC
T ss_pred EEEEeCCCHHHhhc
Confidence 78999999999654
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.25 Score=47.44 Aligned_cols=82 Identities=13% Similarity=0.117 Sum_probs=52.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hc----cChhhH--HHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AE----LLPQHK--EELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~----~~P~~K--~~~v~~l~~~g-~v~mv 301 (473)
++-|++.+++++|++. +++.++|..+.. .+..|+.. +.++ ++ ..|... ....+.+.-.. .++||
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~V 186 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHV 186 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEE
Confidence 4678999999999975 888889875543 25567641 1121 21 123211 22223333223 69999
Q ss_pred cCC-cccHHHHHHCCeeEE
Q 038599 302 GDG-INDAPALAAVDIGIS 319 (473)
Q Consensus 302 GDG-~ND~~al~~AdvgIa 319 (473)
||. ..|..+-++|++-..
T Consensus 187 GD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 187 GDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred cCCcHHHHHHHHHCCCeEE
Confidence 999 599999999998443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.32 Score=48.00 Aligned_cols=81 Identities=20% Similarity=0.149 Sum_probs=47.1
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHH-H-------------HHHHHcCCCccceehccChhhHHHHHHHHhhCC-cE
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAA-L-------------YAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-AT 298 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a-~-------------~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v 298 (473)
-++..++++.|++.|+ ..++|....... . .+....|-. ........|+-=..+++.+.-.. .+
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~-~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQ-PLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCc-eeccCCCCHHHHHHHHHHhCCChhhE
Confidence 5688999999999887 566665332111 0 011111111 01122333433334445554333 89
Q ss_pred EEEcCCc-ccHHHHHHCCe
Q 038599 299 AMVGDGI-NDAPALAAVDI 316 (473)
Q Consensus 299 ~mvGDG~-ND~~al~~Adv 316 (473)
+||||.. .|..+-++|++
T Consensus 223 lmIGD~~~tDI~~A~~aGi 241 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGM 241 (279)
T ss_pred EEECCChHHHHHHHHHcCC
Confidence 9999995 99999999988
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.17 Score=47.59 Aligned_cols=87 Identities=24% Similarity=0.319 Sum_probs=62.6
Q ss_pred ccCCchHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCccceehc--------------------------cChh-
Q 038599 232 SCRSGALEAIKDLKSLGI-KSFILAGDSHAAALYAQDQLDHAFDMVYAE--------------------------LLPQ- 283 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi-~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~--------------------------~~P~- 283 (473)
|+-|+..++|+.+++.|. .++++|--|.--...+-+..|+.. .|++ +.|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d--~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD--LFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH--HHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 567899999999999996 899999999888888888888862 2221 1232
Q ss_pred -hHHHHHHHHhhC----C----cEEEEcCCccc-HHHHHHCCeeEEe
Q 038599 284 -HKEELVELLKKD----G----ATAMVGDGIND-APALAAVDIGISM 320 (473)
Q Consensus 284 -~K~~~v~~l~~~----g----~v~mvGDG~ND-~~al~~AdvgIa~ 320 (473)
=|-.++..++.. | ++.++|||.|| +|.++...--++|
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 355566655432 3 58999999999 5666655444555
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.47 Score=44.23 Aligned_cols=52 Identities=21% Similarity=0.307 Sum_probs=41.0
Q ss_pred EEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCcc
Q 038599 223 PVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSH---AAALYAQDQLDHAFD 274 (473)
Q Consensus 223 ~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~---~~a~~~a~~~gi~~~ 274 (473)
+-|.+..+|..-|++.|+++.|++.+.+|..+|.-.. .+...--+++|+..+
T Consensus 14 lSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~ 68 (262)
T KOG3040|consen 14 LSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVS 68 (262)
T ss_pred ccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCcc
Confidence 4588999999999999999999999999999885554 444444456787653
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.21 E-value=1.6 Score=41.03 Aligned_cols=114 Identities=22% Similarity=0.177 Sum_probs=70.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------ceehccChhhHHHHHHHHhhCC----cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------MVYAELLPQHKEELVELLKKDG----ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------~v~a~~~P~~K~~~v~~l~~~g----~v~m 300 (473)
++-+++.++++++++. +++.++|.-.........+++|+..- .-.+...|.. .-+-..+++.| .++|
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~-~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDP-EIFEYALEKLGVPPEEALF 176 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCc-HHHHHHHHHcCCCcceEEE
Confidence 5577888999999888 88999998777888889999997521 1122233433 33444444444 5999
Q ss_pred EcCC-cccHHHHHHCCe-eEEeCCCCCc--cccccccEEEecCCcccHHHHHH
Q 038599 301 VGDG-INDAPALAAVDI-GISMGISGSA--LAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 301 vGDG-~ND~~al~~Adv-gIa~g~~~~~--~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|||. .||...-++++. ++-+...+.. ......+..+ .++..+..++.
T Consensus 177 VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~~ 227 (229)
T COG1011 177 VGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLLE 227 (229)
T ss_pred ECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHHh
Confidence 9996 677566677776 4444322211 1113455555 55655555543
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.12 E-value=1.3 Score=45.10 Aligned_cols=56 Identities=11% Similarity=0.073 Sum_probs=41.4
Q ss_pred CCceeeEeeeCCeEEEEEEecCc--cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 038599 210 GGKTRGYVYLGATPVGTFSLSDS--CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ 266 (473)
Q Consensus 210 ~G~~vi~va~d~~~lG~i~l~d~--lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a 266 (473)
....++++-+||+++-+..--|. +-++.++++++|. .+..+.++||.+......+.
T Consensus 96 ~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred CCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHc
Confidence 34467788899998865433333 4568899999998 45799999999887776554
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=91.87 E-value=2.7 Score=41.39 Aligned_cols=97 Identities=16% Similarity=0.129 Sum_probs=60.6
Q ss_pred eeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCccceehcc-ChhhHHHHH
Q 038599 214 RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHA---AALYAQDQLDHAFDMVYAEL-LPQHKEELV 289 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~---~a~~~a~~~gi~~~~v~a~~-~P~~K~~~v 289 (473)
.+.+-.||++. -.+..-|++.++|++|+++|+++.++|+.... ....--+++|+... ..+. +|.. ...
T Consensus 4 ~~~~D~DGtl~----~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~--~~~i~ts~~--~~~ 75 (279)
T TIGR01452 4 GFIFDCDGVLW----LGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL--AEQLFSSAL--CAA 75 (279)
T ss_pred EEEEeCCCceE----cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC--hhhEecHHH--HHH
Confidence 44555676663 35677889999999999999999999996533 22233466887532 1111 2211 223
Q ss_pred HHHhhC---C-cEEEEcCCcccHHHHHHCCeeEE
Q 038599 290 ELLKKD---G-ATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 290 ~~l~~~---g-~v~mvGDG~ND~~al~~AdvgIa 319 (473)
+.|+++ + .|.++|+. .....++.+++-+.
T Consensus 76 ~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 76 RLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred HHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 344442 3 79999985 23456777766543
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.78 E-value=1.1 Score=40.31 Aligned_cols=88 Identities=23% Similarity=0.131 Sum_probs=64.1
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHHc-----CCCcc---------------ceehccChhhHH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAA---LYAQDQL-----DHAFD---------------MVYAELLPQHKE 286 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a---~~~a~~~-----gi~~~---------------~v~a~~~P~~K~ 286 (473)
.|..++++.+..+.++++|++++-+|+....-+ +...++. +++.- ++..+-.-+.|.
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~ 104 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKI 104 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhccccccChHHHHH
Confidence 468899999999999999999999999985433 3333334 55432 122222346899
Q ss_pred HHHHHHhhC----C--cEEEEcCCcccHHHHHHCCee
Q 038599 287 ELVELLKKD----G--ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 287 ~~v~~l~~~----g--~v~mvGDG~ND~~al~~Advg 317 (473)
..++.++.. + ..+..|...+|+.+.+++++-
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 999999875 4 578889999999999988763
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.09 E-value=1.2 Score=42.45 Aligned_cols=88 Identities=19% Similarity=0.134 Sum_probs=69.6
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-----------cChhhHHHHHHHHhhCC-c
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-----------LLPQHKEELVELLKKDG-A 297 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-----------~~P~~K~~~v~~l~~~g-~ 297 (473)
..++.|++.+.+++|+++|+.+.+.|+-....+..+.+.+|+. .+|.. ..|+-=....+.|.-.. .
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~--~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~ 161 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLL--DYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEE 161 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccCh--hhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHH
Confidence 3578999999999999999999999999999999999999987 33322 23444444555554344 7
Q ss_pred EEEEcCCcccHHHHHHCCeeEE
Q 038599 298 TAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 298 v~mvGDG~ND~~al~~AdvgIa 319 (473)
+..+.|..+.+.|.++|++-+-
T Consensus 162 CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 162 CVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred eEEEecchhHHHHHHHCCCEEE
Confidence 9999999999999999998443
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=90.94 E-value=0.15 Score=46.15 Aligned_cols=85 Identities=15% Similarity=0.035 Sum_probs=59.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---ce-ehccChhhHHHHHHHHhhCC----cEEEEc
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---MV-YAELLPQHKEELVELLKKDG----ATAMVG 302 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---~v-~a~~~P~~K~~~v~~l~~~g----~v~mvG 302 (473)
=..||++.+.+++|++. +.+++.|......|..+.+.++.... .+ +.+-....|..+++.|..-| .|.|||
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVD 119 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIID 119 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEe
Confidence 34799999999999987 99999999999999999999997631 12 22111111222455554332 799999
Q ss_pred CCcccHHHHHHCCe
Q 038599 303 DGINDAPALAAVDI 316 (473)
Q Consensus 303 DG~ND~~al~~Adv 316 (473)
|...|..+-.++.+
T Consensus 120 D~~~~~~~~~~NgI 133 (162)
T TIGR02251 120 NSPYSYSLQPDNAI 133 (162)
T ss_pred CChhhhccCccCEe
Confidence 99988655444433
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.64 E-value=1.1 Score=48.32 Aligned_cols=102 Identities=20% Similarity=0.100 Sum_probs=65.3
Q ss_pred eeeEeeeCCeEEEEE----EecCc-----cCCchHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHcCC
Q 038599 213 TRGYVYLGATPVGTF----SLSDS-----CRSGALEAIKDLKSLGIKSFILAGDSH------------AAALYAQDQLDH 271 (473)
Q Consensus 213 ~vi~va~d~~~lG~i----~l~d~-----lr~~a~~~I~~L~~~gi~v~mlTGD~~------------~~a~~~a~~~gi 271 (473)
+++++-.|++++-.- ...|+ +-|++.+.+++|++.|++++++|.-.. ..+..+.+++|+
T Consensus 169 Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 169 KIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 466777787776321 11221 468999999999999999999997544 347788899998
Q ss_pred Cccceehcc-------ChhhHHHHHHHHh----hC-CcEEEEcCCcccHHHHHHC
Q 038599 272 AFDMVYAEL-------LPQHKEELVELLK----KD-GATAMVGDGINDAPALAAV 314 (473)
Q Consensus 272 ~~~~v~a~~-------~P~~K~~~v~~l~----~~-g~v~mvGDG~ND~~al~~A 314 (473)
+-+.+++.- .|+-=..+.+.+. -. ....||||...|..+-+.|
T Consensus 249 pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~a 303 (526)
T TIGR01663 249 PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAA 303 (526)
T ss_pred ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhc
Confidence 755443221 1222222333332 11 2699999999997664443
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=90.12 E-value=1.5 Score=43.02 Aligned_cols=79 Identities=19% Similarity=0.204 Sum_probs=53.8
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCc-cceehccC--------hhhHHHHHHHHhhCC-
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAA---ALYAQDQLDHAF-DMVYAELL--------PQHKEELVELLKKDG- 296 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~---a~~~a~~~gi~~-~~v~a~~~--------P~~K~~~v~~l~~~g- 296 (473)
+.+.=|++.+..+.+++.|++++.+||..... +..--++.|++. +.++=+-. .+.|...=+.+.++|
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eGY 222 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEGY 222 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcCc
Confidence 35566799999999999999999999998532 223335678863 22222211 123555556666777
Q ss_pred -cEEEEcCCcccH
Q 038599 297 -ATAMVGDGINDA 308 (473)
Q Consensus 297 -~v~mvGDG~ND~ 308 (473)
.++.+||..+|.
T Consensus 223 rIv~~iGDq~sDl 235 (275)
T TIGR01680 223 NIVGIIGDQWNDL 235 (275)
T ss_pred eEEEEECCCHHhc
Confidence 689999999994
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.86 E-value=3.7 Score=40.33 Aligned_cols=106 Identities=17% Similarity=0.213 Sum_probs=67.7
Q ss_pred EEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc----CCCc--cceehccChhhHHHHHHHHhhC---
Q 038599 225 GTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL----DHAF--DMVYAELLPQHKEELVELLKKD--- 295 (473)
Q Consensus 225 G~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~----gi~~--~~v~a~~~P~~K~~~v~~l~~~--- 295 (473)
|++.-.+.+=|++.++|+.|+++|++++.+|.....+...+++++ |++. +.++.. .. .....++++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS----~~-at~~~l~~~~~~ 91 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTS----GD-ATADYLAKQKPG 91 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecH----HH-HHHHHHHhhCCC
Confidence 566688999999999999999999999999988876666444433 3321 122211 11 122333332
Q ss_pred CcEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCc
Q 038599 296 GATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDI 341 (473)
Q Consensus 296 g~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l 341 (473)
++|.++|. ..+...|+.+++-+.-. ..+ ...|+|+...|-
T Consensus 92 ~kv~viG~-~~l~~~l~~~G~~~~~~--~~~---~~~d~Vv~g~d~ 131 (269)
T COG0647 92 KKVYVIGE-EGLKEELEGAGFELVDE--EEP---ARVDAVVVGLDR 131 (269)
T ss_pred CEEEEECC-cchHHHHHhCCcEEecc--CCC---CcccEEEEecCC
Confidence 38999994 34557888888877642 111 125777766553
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=89.58 E-value=0.74 Score=45.53 Aligned_cols=57 Identities=11% Similarity=0.115 Sum_probs=47.9
Q ss_pred eeeEeeeCCeEEEEEEecCc--cC-CchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSDS--CR-SGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~--lr-~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
.++++-.|++++.- +.+ +| |++.+++++|+++|+++.++|+-....+...-+++|+.
T Consensus 127 kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd 186 (301)
T TIGR01684 127 HVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLD 186 (301)
T ss_pred eEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCC
Confidence 46777778887542 332 56 99999999999999999999998988999999999998
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=87.62 E-value=0.9 Score=40.95 Aligned_cols=75 Identities=16% Similarity=0.038 Sum_probs=50.0
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--c-eehcc----ChhhH--HHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--M-VYAEL----LPQHK--EELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~-v~a~~----~P~~K--~~~v~~l~~~g-~v~mv 301 (473)
++.|++.++++ ++.++|.-+........++.|+..- . +.++. .|+.. ....+.+.-.. .++||
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 47889999987 3678898888888888899998621 1 11211 23222 33344443333 79999
Q ss_pred cCCcccHHHHHH
Q 038599 302 GDGINDAPALAA 313 (473)
Q Consensus 302 GDG~ND~~al~~ 313 (473)
||...|..+-++
T Consensus 163 gD~~~Di~~A~~ 174 (175)
T TIGR01493 163 AAHQWDLIGARK 174 (175)
T ss_pred ecChhhHHHHhc
Confidence 999999887654
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=87.52 E-value=21 Score=38.30 Aligned_cols=86 Identities=16% Similarity=0.133 Sum_probs=61.9
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCcc-----ce------ehc------cChhhHHHHHHHHhh
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ-LDHAFD-----MV------YAE------LLPQHKEELVELLKK 294 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~-~gi~~~-----~v------~a~------~~P~~K~~~v~~l~~ 294 (473)
+++++.+. +++.|.+ +++|+-...-++.++++ +|++.- ++ -++ +.-++|.+.++....
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g 186 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFG 186 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHhC
Confidence 66765554 4567754 99999999999999987 898721 00 011 233569888875443
Q ss_pred CC-cEEEEcCCcccHHHHHHCCeeEEeCC
Q 038599 295 DG-ATAMVGDGINDAPALAAVDIGISMGI 322 (473)
Q Consensus 295 ~g-~v~mvGDG~ND~~al~~AdvgIa~g~ 322 (473)
.. ....-||..||.|+|+.||-...++.
T Consensus 187 ~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 187 DALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 22 34788999999999999999999973
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=86.85 E-value=1.9 Score=33.25 Aligned_cols=60 Identities=25% Similarity=0.290 Sum_probs=39.2
Q ss_pred ChhhHHHHHHHHhhCC-cEEEEcCC-cccHHHHHHCCe-eEEeCCCCC---ccc---cccccEEEecCCccc
Q 038599 281 LPQHKEELVELLKKDG-ATAMVGDG-INDAPALAAVDI-GISMGISGS---ALA---MESGHVILMSNDIRK 343 (473)
Q Consensus 281 ~P~~K~~~v~~l~~~g-~v~mvGDG-~ND~~al~~Adv-gIa~g~~~~---~~a---~~~ad~vl~~~~l~~ 343 (473)
.|.-=..+.+.+.-.. .+.||||. ..|..+-+++++ +|.+. +|. +.. ...+|+|+ +++..
T Consensus 6 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~-tG~~~~~~~~~~~~~pd~vv--~~l~e 74 (75)
T PF13242_consen 6 SPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVL-TGVYSPEDLEKAEHKPDYVV--DDLKE 74 (75)
T ss_dssp SHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEES-SSSSCCCGHHHSSSTTSEEE--SSGGG
T ss_pred cHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEEC-CCCCCHHHHhccCCCCCEEE--CCHHh
Confidence 3443444555554434 89999999 999999999998 44443 332 222 35788988 66654
|
... |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=85.53 E-value=3.4 Score=37.63 Aligned_cols=86 Identities=17% Similarity=0.239 Sum_probs=57.8
Q ss_pred cCCchHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCC----------ccceehccChhhHHHHHHHHhhC-C----
Q 038599 233 CRSGALEAIKDLKSLGIKSFILA-GDSHAAALYAQDQLDHA----------FDMVYAELLPQHKEELVELLKKD-G---- 296 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlT-GD~~~~a~~~a~~~gi~----------~~~v~a~~~P~~K~~~v~~l~~~-g---- 296 (473)
+-|++++++++|++.|+++.+.| -|.+..|..+-+.+++. .---+.+.-|..|..-.+.++++ |
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~ 125 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYE 125 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GG
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChh
Confidence 57899999999999999999999 58899999999999998 21223444578999999998865 3
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 297 ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
.++++=|-.......+. +|+..
T Consensus 126 eMlFFDDe~~N~~~v~~--lGV~~ 147 (169)
T PF12689_consen 126 EMLFFDDESRNIEVVSK--LGVTC 147 (169)
T ss_dssp GEEEEES-HHHHHHHHT--TT-EE
T ss_pred HEEEecCchhcceeeEe--cCcEE
Confidence 58888776555555444 45543
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.45 E-value=1.6 Score=39.73 Aligned_cols=88 Identities=15% Similarity=0.172 Sum_probs=63.1
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHcCCCcc--ceehccChh-hHHHHHHHHhhCCcEEEEcCCc
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHA----AALYAQDQLDHAFD--MVYAELLPQ-HKEELVELLKKDGATAMVGDGI 305 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~----~a~~~a~~~gi~~~--~v~a~~~P~-~K~~~v~~l~~~g~v~mvGDG~ 305 (473)
+++-+++.|..=+++|-.++.+||.... ++..+|+...|... .+|+.-.|. .+..-...+|+++.-..-||..
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~k~~qy~Kt~~i~~~~~~IhYGDSD 194 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKPKPGQYTKTQWIQDKNIRIHYGDSD 194 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCCCcccccccHHHHhcCceEEecCCc
Confidence 5667889999888999999999998854 44566666666532 345544441 2223345567777678889999
Q ss_pred ccHHHHHHCCe-eEEe
Q 038599 306 NDAPALAAVDI-GISM 320 (473)
Q Consensus 306 ND~~al~~Adv-gIa~ 320 (473)
||..|.+.|++ ||-+
T Consensus 195 ~Di~AAkeaG~RgIRi 210 (237)
T COG3700 195 NDITAAKEAGARGIRI 210 (237)
T ss_pred hhhhHHHhcCccceeE
Confidence 99999999988 6654
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=83.34 E-value=2.8 Score=41.64 Aligned_cols=57 Identities=11% Similarity=0.087 Sum_probs=46.5
Q ss_pred eeeEeeeCCeEEEEEEecCc--cC-CchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSDS--CR-SGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~--lr-~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
.++++-.|++++-- +++ +| |++.+++++|+++|+++.++|+.+...+....+.+|+.
T Consensus 129 ~~i~~D~D~TL~~~---~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 129 HVIVFDLDSTLITD---EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cEEEEecCCCccCC---CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 46666778776542 333 45 89999999999999999999988888889999999997
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=81.91 E-value=17 Score=34.72 Aligned_cols=84 Identities=20% Similarity=0.258 Sum_probs=50.4
Q ss_pred EEecCccCCchHHHHHHHHhCCCeEEEEc---CCCHHHHHH-HHHHcCCCc--cceehccChhhHHHHHHHHhh--CC-c
Q 038599 227 FSLSDSCRSGALEAIKDLKSLGIKSFILA---GDSHAAALY-AQDQLDHAF--DMVYAELLPQHKEELVELLKK--DG-A 297 (473)
Q Consensus 227 i~l~d~lr~~a~~~I~~L~~~gi~v~mlT---GD~~~~a~~-~a~~~gi~~--~~v~a~~~P~~K~~~v~~l~~--~g-~ 297 (473)
+.-.+.+=|++.++|+.++++|+++.++| |.+...... +.+..|+.. ++++... ....+.|++ .+ .
T Consensus 9 L~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~-----~~~~~~l~~~~~~~~ 83 (236)
T TIGR01460 9 LWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG-----SVTKDLLRQRFEGEK 83 (236)
T ss_pred cCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH-----HHHHHHHHHhCCCCE
Confidence 33456677899999999999999999998 555544443 333367641 1222111 112233333 23 7
Q ss_pred EEEEcCCcccHHHHHHCCe
Q 038599 298 TAMVGDGINDAPALAAVDI 316 (473)
Q Consensus 298 v~mvGDG~ND~~al~~Adv 316 (473)
|.++|.. .....++..++
T Consensus 84 v~v~G~~-~~~~~l~~~g~ 101 (236)
T TIGR01460 84 VYVIGVG-ELRESLEGLGF 101 (236)
T ss_pred EEEECCH-HHHHHHHHcCC
Confidence 8999863 34556666553
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 473 | ||||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 1e-41 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-41 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 4e-38 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 7e-38 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 2e-37 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-37 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 3e-35 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-33 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 9e-27 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-26 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-26 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 5e-14 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 3e-11 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 8e-11 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-10 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-10 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-10 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-10 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 5e-10 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-09 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-09 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 6e-06 |
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 473 | |||
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 8e-83 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 2e-81 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 1e-77 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 6e-76 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 8e-75 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-74 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 2e-21 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 9e-21 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 2e-16 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 4e-16 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 3e-15 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 2e-14 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-13 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 4e-07 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 6e-06 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 8e-06 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 2e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 3e-04 |
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 256 bits (656), Expect = 8e-83
Identities = 94/277 (33%), Positives = 151/277 (54%), Gaps = 7/277 (2%)
Query: 85 VKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHP 144
++ E ++ V DKTGT+T G F VTD + + S LL +S+E++S HP
Sbjct: 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDI--VGFNHSEDELLQIAASLEARSEHP 58
Query: 145 MAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIA 204
+AAA+V+ A VE+F+ PG+G+ G ++G + + G D
Sbjct: 59 IAAAIVEEAEKRGFGLTE--VEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTDESV 116
Query: 205 EAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALY 264
E GKT ++ G +L+D R + EAI LK++GIK +L GD+ A +
Sbjct: 117 EKLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKW 176
Query: 265 AQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDIGISMGISG 324
++L D +AE+LP K E V+ +++ TAMVGDG+NDAPALA D+GI++G +G
Sbjct: 177 VAEELG--LDDYFAEVLPHEKAEKVKEVQQKYVTAMVGDGVNDAPALAQADVGIAIG-AG 233
Query: 325 SALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQN 361
+ +A+E+ ++L+ ND R + ++L+RK +K
Sbjct: 234 TDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGL 270
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 251 bits (644), Expect = 2e-81
Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 31/289 (10%)
Query: 74 AFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYW 133
+ K G+++K + E + ++ + +KTGT+T G VT F + L +
Sbjct: 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQF------IGDSLSLAY 58
Query: 134 VSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIG 193
+S+E+ SSHP+A A+V YA+ ++ + V+DF+ G G+ GKI +I +
Sbjct: 59 AASVEALSSHPIAKAIVKYAKEQGVKILE--VKDFKEISGIGVRGKISDKIIEVKKAE-- 114
Query: 194 PRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFI 253
VY+ P+ +F++SD R + ++ LK+ G+K I
Sbjct: 115 -----------------NNNDIAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIII 157
Query: 254 LAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGAT-AMVGDGINDAPALA 312
L+GD +L+ Y+ L P+ K ++E LK++G M+GDG+NDA ALA
Sbjct: 158 LSGDKEDKVKELSKELN--IQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 313 AVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQN 361
D+ ++MG +G ++ +IL+SNDI + IK ++ S + N
Sbjct: 216 LADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 243 bits (622), Expect = 1e-77
Identities = 102/281 (36%), Positives = 152/281 (54%), Gaps = 15/281 (5%)
Query: 77 KAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSS 136
K A G+L+K D LE+ KV V DKTGT+T+G+ VTD + + LL +
Sbjct: 12 KGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDL--VPLNGDERELLRLAAI 69
Query: 137 IESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRT 196
E +S HP+A A+V A IE E + GEG+ I +GN+R+
Sbjct: 70 AERRSEHPIAEAIVKKALEHGIELGE--PEKVEVIAGEGVVAD----GILVGNKRLMEDF 123
Query: 197 GCSKDSIAEAKCTG----GKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSF 252
G + + E KT V G ++SD+ + A A+++LK +GIK
Sbjct: 124 GVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVG 183
Query: 253 ILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALA 312
++ GD+ +A +L+ D+V AE+LP K E V+ L+ A VGDGINDAPALA
Sbjct: 184 MITGDNWRSAEAISRELN--LDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALA 241
Query: 313 AVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARK 353
D+GI++G SGS +A+ESG ++L+ +D+R + AI+L+RK
Sbjct: 242 QADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRK 281
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 251 bits (643), Expect = 6e-76
Identities = 112/362 (30%), Positives = 181/362 (50%), Gaps = 41/362 (11%)
Query: 30 PLQSLA--VAAVIFGLPAILIRSIASI---------KSLTFNINVLILMAVLIF---CAF 75
P+Q LA V+ F +PA+++ ++ S +L++ + + ++VLI CA
Sbjct: 331 PIQRLADTVSG-WF-VPAVILVAVLSFIVWALLGPQPALSYGL--IAAVSVLIIACPCAL 386
Query: 76 ------------SKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICD 123
K A +G+L+K + LE + KV + +DKTGT+T G +T + D
Sbjct: 387 GLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRI--VTD 444
Query: 124 DVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGN 183
D L +++E +S HP+A A+V A+ + VE F+ G+G+ G++ G+
Sbjct: 445 DFVEDNALALAAALEHQSEHPLANAIVHAAKEKGLSLGS--VEAFEAPTGKGVVGQVDGH 502
Query: 184 VIYIGNRRIGPRTGCSKDSI---AEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEA 240
+ IGN R+ G + A+ G + ++ + V + D +S E
Sbjct: 503 HVAIGNARLMQEHGGDNAPLFEKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPET 562
Query: 241 IKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGAT-A 299
I +L+ GI+ +L GDS A L V AE++P+ K +V LK G A
Sbjct: 563 ILELQQSGIEIVMLTGDSKRTAEAVAGTLG--IKKVVAEIMPEDKSRIVSELKDKGLIVA 620
Query: 300 MVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLI 359
M GDG+NDAPALA DIGI+MG +G+ +A+ES V L+ D+R I KA +L+ + +
Sbjct: 621 MAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIR 679
Query: 360 QN 361
QN
Sbjct: 680 QN 681
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 248 bits (635), Expect = 8e-75
Identities = 125/361 (34%), Positives = 185/361 (51%), Gaps = 44/361 (12%)
Query: 30 PLQSLA--VAAVIFGLPAILIRSIASI--------KSLTFNINVLILMAVLIF---CAF- 75
P+Q LA V A F +P +L+ +I++ L F LI AVL+ CAF
Sbjct: 316 PIQRLADKVVA-YF-IPTVLLVAISAFIYWYFIAHAPLLFAFTTLI--AVLVVACPCAFG 371
Query: 76 -----------SKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDD 124
K A G+L+K D LE+ KV V DKTGT+T+G+ VTD + +
Sbjct: 372 LATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDL--VPLN 429
Query: 125 VSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNV 184
LL + E +S HP+A A+V A IE E + GEG+
Sbjct: 430 GDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGE--PEKVEVIAGEGVVAD----G 483
Query: 185 IYIGNRRIGPRTGCSKDSIAEAKCTG----GKTRGYVYLGATPVGTFSLSDSCRSGALEA 240
I +GN+R+ G + + E KT V G ++SD+ + A A
Sbjct: 484 ILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPA 543
Query: 241 IKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAM 300
+++LK +GIK ++ GD+ +A +L+ D+V AE+LP K E V+ L+ A
Sbjct: 544 VQELKRMGIKVGMITGDNWRSAEAISRELN--LDLVIAEVLPHQKSEEVKKLQAKEVVAF 601
Query: 301 VGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQ 360
VGDGINDAPALA D+GI++G SGS +A+ESG ++L+ +D+R + AI+L+RK +K+ Q
Sbjct: 602 VGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQ 660
Query: 361 N 361
N
Sbjct: 661 N 661
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 245 bits (628), Expect = 2e-74
Identities = 122/360 (33%), Positives = 183/360 (50%), Gaps = 42/360 (11%)
Query: 30 PLQSLA-VAAVIFGLPAILIRSIASI--------KSLTFNINVLILMAVLIF---CAF-- 75
P+Q LA F +P +L+ +I++ L F L+AVL+ CAF
Sbjct: 238 PIQRLADKVVAYF-IPTVLLVAISAFIYWYFIAHAPLLFAF--TTLIAVLVVACPCAFGL 294
Query: 76 ----------SKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDV 125
K A G+L+K D LE+ KV V DKTGT+T+G+ VTD + +
Sbjct: 295 ATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDL--VPLNG 352
Query: 126 SLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVI 185
LL + E +S HP+A A+V A IE E + GEG+ I
Sbjct: 353 DERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGE--PEKVEVIAGEGVVAD----GI 406
Query: 186 YIGNRRIGPRTGCSKDSIAEAKCTG----GKTRGYVYLGATPVGTFSLSDSCRSGALEAI 241
+GN+R+ G + + E KT V G ++SD+ + A A+
Sbjct: 407 LVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAV 466
Query: 242 KDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMV 301
++LK +GIK ++ GD+ +A +L+ D+V AE+LP K E V+ L+ A V
Sbjct: 467 QELKRMGIKVGMITGDNWRSAEAISRELN--LDLVIAEVLPHQKSEEVKKLQAKEVVAFV 524
Query: 302 GDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQN 361
GDGINDAPALA D+GI++G SGS +A+ESG ++L+ +D+R + AI+L+RK +K+ QN
Sbjct: 525 GDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQN 583
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 2e-21
Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 44/209 (21%)
Query: 224 VGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGD------------------SHAAALYA 265
VG L D R + E I+ +LG+ ++ GD ++AL
Sbjct: 480 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG 539
Query: 266 QDQLDHAFDM----------VYAELLPQHKEELVELLKKDGAT-AMVGDGINDAPALAAV 314
+ + + +A + P+HK E+V+ L++ M GDG+NDAPAL
Sbjct: 540 THKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKA 599
Query: 315 DIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKA---STKLIQNVTLSVTVKGA 371
DIGI++ + A + ++L + I A+ +R +S+T+
Sbjct: 600 DIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY-AVSITI-RI 656
Query: 372 VLVLAVA----GYPL-----VWVAVLTDV 391
V + + + +A+L D
Sbjct: 657 VFGFMLIALIWEFDFSAFMVLIIAILNDG 685
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 9e-21
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 224 VGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAA------------LYAQDQLDH 271
+G D R + + + K+LG+ +L GD+ A +Y ++L
Sbjct: 527 LGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGL 586
Query: 272 AF--DM-------------VYAELLPQHKEELVELLKKDGAT-AMVGDGINDAPALAAVD 315
DM +AE+ PQHK +VE+L++ G AM GDG+NDAP+L D
Sbjct: 587 GGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKAD 646
Query: 316 IGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKA---STKLIQNVTLSVTVK-GA 371
GI++ S A + ++ ++ + I A+K +R+ + +++++
Sbjct: 647 TGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY-RIALSIHLEI 704
Query: 372 VLVLAVAGYP-------LVWVAVLTDV 391
L L +A +V++A+ DV
Sbjct: 705 FLGLWIAILNRSLNIELVVFIAIFADV 731
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 2e-16
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 266 QDQLDHAFDMVYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPALAAVDIGISMGISG 324
+ L +MV+A PQ K +VE ++ GA A+ GDG+ND+PAL DIG++MGI+G
Sbjct: 689 VEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAG 748
Query: 325 SALAMESGHVILM 337
S A + +IL+
Sbjct: 749 SDAAKNAADMILL 761
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 4e-16
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 266 QDQLDHAFD----MVYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPALAAVDIGISM 320
+ LD +V+A PQ K +VE ++ GA A+ GDG+ND+PAL DIG++M
Sbjct: 680 TEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 739
Query: 321 GISGSALAMESGHVILM 337
GISGS ++ ++ +IL+
Sbjct: 740 GISGSDVSKQAADMILL 756
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* Length = 185 | Back alignment and structure |
|---|
Score = 72.8 bits (178), Expect = 3e-15
Identities = 30/185 (16%), Positives = 55/185 (29%), Gaps = 26/185 (14%)
Query: 102 LDKTGTVTRGEFTVTDFQSI--CDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159
GT V + + + +S +L V + ES S HP+ A+ Y +
Sbjct: 2 FTMHGT-----PVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDT 56
Query: 160 PVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSI---AEAKCTGGKTRGY 216
DFQ PG GI K+ + K++ +A T
Sbjct: 57 ETLGTCIDFQVVPGCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSS 116
Query: 217 VYLGATPVGTFSLSD----------------SCRSGALEAIKDLKSLGIKSFILAGDSHA 260
+ + A + + + + + + G + ++A D
Sbjct: 117 MIIDAQISNALNAQQYKVLIGNREWMIRNGLVINNDVNDFMTEHERKGRTAVLVAVDDEL 176
Query: 261 AALYA 265
L A
Sbjct: 177 CGLIA 181
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A Length = 165 | Back alignment and structure |
|---|
Score = 70.0 bits (171), Expect = 2e-14
Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 4/159 (2%)
Query: 111 GEFTVTDFQSICD--DVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDF 168
V + D + L +L V + E+ S HP+ A+ Y + DF
Sbjct: 4 MVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTETLGYCTDF 63
Query: 169 QNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKT--RGYVYLGATPVGT 226
Q PG GI K+ + + S + A + + + L
Sbjct: 64 QAVPGCGIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWL 123
Query: 227 FSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYA 265
+ S +A+ D + G + ++A D + A
Sbjct: 124 RRNGLTISSDVSDAMTDHEMKGQTAILVAIDGVLCGMIA 162
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 2e-13
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 276 VYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPALAAVDIGISMGISGSALAMESGHV 334
+A + P HK ++VE L+ TAM GDG+NDAPAL +IGI+MG SG+A+A + +
Sbjct: 676 CFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEM 734
Query: 335 ILM 337
+L
Sbjct: 735 VLA 737
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* Length = 156 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 4e-07
Identities = 24/140 (17%), Positives = 38/140 (27%), Gaps = 14/140 (10%)
Query: 105 TGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPE- 163
+G R ++F V TL P ++V A+ +
Sbjct: 14 SGHGGRHNRQASEFIPA-QGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDV 72
Query: 164 NVEDFQNFPGEGIFG----KIHGNVIYIGN----RRIGPRTGCSKDSIAEAKCTG----G 211
P I +I G+ RR G + + K G
Sbjct: 73 QSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQG 132
Query: 212 KTRGYVYLGATPVGTFSLSD 231
T V G+ +G +L D
Sbjct: 133 ATPLVVVEGSRVLGVIALKD 152
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 6e-06
Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 22/108 (20%)
Query: 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA-ELL------------- 281
G E + L+ ++ F+++G + + +L+ V+A L
Sbjct: 90 GIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDET 149
Query: 282 -----PQHKEELVELLKKD---GATAMVGDGINDAPALAAVDIGISMG 321
K ++++LLK+ M+GDG D A D I G
Sbjct: 150 QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG 197
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 8e-06
Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 24/105 (22%)
Query: 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL-------------- 281
G L + +K+ G K+ I++G + + D ++ +
Sbjct: 183 GLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQ--LDYAFSNTVEIRDNVLTDNITLP 240
Query: 282 ---PQHKEE-LVELLKKDG----ATAMVGDGINDAPALAAVDIGI 318
+K++ LV+L + GDG ND P L GI
Sbjct: 241 IMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGI 285
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 26/105 (24%), Positives = 35/105 (33%), Gaps = 24/105 (22%)
Query: 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL-------------- 281
GALE + LK K +G A + +D L D ++ L
Sbjct: 79 GALELVSALKEKNYKVVCFSGGFDLATNHYRDLLH--LDAAFSNTLIVENDALNGLVTGH 136
Query: 282 ---PQHKEE-LVELLKKDG----ATAMVGDGINDAPALAAVDIGI 318
K E L+ L + T +VGDG ND I I
Sbjct: 137 MMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKI 181
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 4e-05
Identities = 35/281 (12%), Positives = 66/281 (23%), Gaps = 85/281 (30%)
Query: 88 GDYLEILAK--VKMVALDKTGTVTRGEFTVTDFQSIC---DDVSLGTLLYWVSSIESKSS 142
D L + V + + + + I D VS L+W + SK
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWT--LLSKQE 76
Query: 143 HPMAAALV-----DY---ARSLAIEP------------------------VPENVEDFQN 170
+ + +Y + E NV Q
Sbjct: 77 EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP 136
Query: 171 F-----------PGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYL 219
+ P + + I G G K +A C Y
Sbjct: 137 YLKLRQALLELRPAKNVL--IDG------------VLGSGKTWVALDVC-----LSYKVQ 177
Query: 220 GATPVGTF--SLSDSCRSGA-LEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMV 276
F +L + LE ++ L ++ D + + +
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237
Query: 277 YAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDIG 317
++ L+ L + +A A A ++
Sbjct: 238 LKS--KPYENCLLVL-----------LNVQNAKAWNAFNLS 265
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 25/109 (22%)
Query: 234 RSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA----------ELLPQ 283
R G E + + I ++++G + + D +Y +
Sbjct: 79 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI-VEKDRIYCNHASFDNDYIHIDWP 137
Query: 284 H-------------KEELVELLKKDGA-TAMVGDGINDAPALAAVDIGI 318
H K ++ L + M+GD + D A D+
Sbjct: 138 HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF 186
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 20/99 (20%), Positives = 30/99 (30%), Gaps = 19/99 (19%)
Query: 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL-------------- 281
GA+E + L+ + IL+ + + QL F + L
Sbjct: 73 GAVEFVDWLRE-RFQVVILSDTFYEFSQPLMRQLG--FPTLLCHKLEIDDSDRVVGYQLR 129
Query: 282 -PQHKEELVELLKKDGA-TAMVGDGINDAPALAAVDIGI 318
K + V K GD ND L+ GI
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 24/105 (22%)
Query: 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA-ELL------------- 281
GA E IK+LK+ G +++G A +++L D +A L+
Sbjct: 80 GAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG--LDYAFANRLIVKDGKLTGDVEGE 137
Query: 282 ---PQHKEE-LVELLKKDG----ATAMVGDGINDAPALAAVDIGI 318
K E L ++ K +G T VGDG ND + I
Sbjct: 138 VLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKI 182
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 24/105 (22%)
Query: 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL-------------- 281
E + L + G K I +G + Y ++QL D + L
Sbjct: 182 ELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLS--LDYAQSNTLEIVSGKLTGQVLGE 239
Query: 282 ---PQHKEE-LVELLKKDG----ATAMVGDGINDAPALAAVDIGI 318
Q K + L+ L ++ T VGDG ND +AA +G+
Sbjct: 240 VVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGV 284
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 473 | |||
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 100.0 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 100.0 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 100.0 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.88 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 99.72 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 99.72 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.69 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 99.62 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.45 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.42 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.42 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.38 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.36 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.32 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.24 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.13 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.09 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.08 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.96 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.9 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.9 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.89 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.84 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.83 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.8 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.78 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.77 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.76 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.76 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.71 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.7 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.7 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.66 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.66 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.61 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.57 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.57 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.55 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.53 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.52 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.51 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.51 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.5 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.5 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.5 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.49 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.48 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.48 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.48 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.47 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.47 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.47 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.46 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.46 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.44 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.44 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.43 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.43 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.41 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.39 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.38 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.36 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.35 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.34 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.34 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.33 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.32 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.28 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.27 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.27 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.26 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.25 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.25 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.24 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.23 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.22 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.22 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.2 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.2 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.19 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.19 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.18 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.13 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.13 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.13 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.11 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.11 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.09 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.08 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.08 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.08 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.06 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.01 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.94 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.93 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.93 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.92 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.9 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.89 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.88 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.77 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.73 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.7 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.7 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.68 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.66 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.63 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.61 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.52 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.5 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.39 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.36 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.36 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.33 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 97.3 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.28 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.27 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.22 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.17 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.15 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 97.14 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 97.13 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.1 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.99 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 96.95 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.95 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.92 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 96.81 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.73 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.61 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 96.41 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.41 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 95.82 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 95.81 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.44 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.37 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.27 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 95.26 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 94.69 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 94.63 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 93.98 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 93.67 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 92.64 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 92.17 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 91.92 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 91.78 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 91.73 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 91.52 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 90.84 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 90.72 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 89.3 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 87.23 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 85.78 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 81.45 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 80.09 |
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-68 Score=585.83 Aligned_cols=385 Identities=29% Similarity=0.438 Sum_probs=339.0
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcch---hHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHP---LQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKA 78 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~---~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~l 78 (473)
+++++|+.|++++++++.++.+..+...+ ..+...+++++...|..|+...++ +++.++.++
T Consensus 337 d~~a~~~v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~---------------a~~~~~~~~ 401 (736)
T 3rfu_A 337 DTVSGWFVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPM---------------SIMVGVGKG 401 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHH---------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHH---------------HHHHHHHHH
Confidence 45678888888888887666543321111 111233333333344444433332 889999999
Q ss_pred HHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCC
Q 038599 79 ATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAI 158 (473)
Q Consensus 79 ak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~ 158 (473)
+|+|+++|+++++|++|++|+||||||||||+|+|+|.++. . ++.+.++++.+++++|..++||+++|+++++++.++
T Consensus 402 a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~-~-~~~~~~~~l~~aa~le~~s~hPla~Aiv~~a~~~~~ 479 (736)
T 3rfu_A 402 AQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIV-T-DDFVEDNALALAAALEHQSEHPLANAIVHAAKEKGL 479 (736)
T ss_dssp HHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEE-E-SSSCHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTCC
T ss_pred hhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEE-e-cCCCHHHHHHHHHHHhhcCCChHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999998 3 567888999999999999999999999999998887
Q ss_pred CCCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcch---hHHHHhcCCceeeEeeeCCeEEEEEEecCccCC
Q 038599 159 EPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDS---IAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRS 235 (473)
Q Consensus 159 ~~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~---~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~ 235 (473)
.. ..+.+|+..+|+|+.+.++|+.+.+|+++++.+.+.+..+ ..+++.++|++++++++|++++|++.++|++|+
T Consensus 480 ~~--~~~~~f~~~~g~gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~ 557 (736)
T 3rfu_A 480 SL--GSVEAFEAPTGKGVVGQVDGHHVAIGNARLMQEHGGDNAPLFEKADELRGKGASVMFMAVDGKTVALLVVEDPIKS 557 (736)
T ss_dssp CC--CCCSCCCCCTTTEEEECSSSSCEEEESHHHHHHHCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCS
T ss_pred Cc--cCcccccccCCceEEEEECCEEEEEcCHHHHHHcCCChhHHHHHHHHHHhcCCeEEEEEECCEEEEEEEeeccchh
Confidence 65 4678899999999999999999999999998776665432 356788999999999999999999999999999
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHC
Q 038599 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAV 314 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~A 314 (473)
+++++|++||++|++++|+|||+..++..+++++||+ .++++++|++|.++|+.||++| .|+|+|||.||+|||++|
T Consensus 558 ~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~--~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~A 635 (736)
T 3rfu_A 558 STPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK--KVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKA 635 (736)
T ss_dssp SHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC--CEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHS
T ss_pred hHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC--EEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhC
Confidence 9999999999999999999999999999999999998 8999999999999999999998 999999999999999999
Q ss_pred CeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------Hhh-HHHHHHH
Q 038599 315 DIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAV------AGY-PLVWVAV 387 (473)
Q Consensus 315 dvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~------~g~-~~~~~a~ 387 (473)
|+||+|| ++++.++++||++++++|+.++++++++||++++++++|+.|++.||++++++++ +|+ .+||++.
T Consensus 636 dvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAag~l~p~~G~~l~P~~aa 714 (736)
T 3rfu_A 636 DIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAA 714 (736)
T ss_dssp SEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSSCCCCHHHHH
T ss_pred CEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHH
Confidence 9999999 8999999999999999999999999999999999999999999999999999998 565 4899999
Q ss_pred HHHHHHHHHHHHHhHhhhccc
Q 038599 388 LTDVGTCLVVILNSMLLLKNN 408 (473)
Q Consensus 388 l~~~~s~l~v~~ns~~l~~~~ 408 (473)
++|.+|+++|++||+|+++++
T Consensus 715 ~~m~~Ssv~Vv~nslrl~~~~ 735 (736)
T 3rfu_A 715 AAMALSSVSVIINALRLKRVT 735 (736)
T ss_dssp HHHHHHHHHHHHHHHTCCCTT
T ss_pred HHHHhhHHHHHHHHHHhcccC
Confidence 999999999999999997654
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-65 Score=559.36 Aligned_cols=385 Identities=30% Similarity=0.398 Sum_probs=334.0
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcch--hHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHP--LQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~--~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~la 79 (473)
+++++|+.|++++++++.++.+..+...+ ..+...+++++...|..|+...++ ++..++.+++
T Consensus 322 d~~~~~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~---------------a~~~~~~~~a 386 (723)
T 3j09_A 322 DKVVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPT---------------ALTVGMGKGA 386 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHH---------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHH---------------HHHHHHHHHH
Confidence 35567777777777666544321110000 112333344444445555443333 8899999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
|+|+++|+++++|++|++|++|||||||||+|+|+|.++... +.+.++++.+++++|..++||+++|+++++++.++.
T Consensus 387 ~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~--~~~~~~~l~~aa~~e~~s~hP~~~Ai~~~a~~~~~~ 464 (723)
T 3j09_A 387 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL--NGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIE 464 (723)
T ss_dssp TTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEES--SSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCC
T ss_pred HCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeC--CCCHHHHHHHHHHHhccCCCchhHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999886 357888999999999999999999999999998876
Q ss_pred CCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcch----hHHHHhcCCceeeEeeeCCeEEEEEEecCccCC
Q 038599 160 PVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDS----IAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRS 235 (473)
Q Consensus 160 ~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~----~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~ 235 (473)
. ....+++.++|+|+.+ +.+.+|+++++.+.+....+ ..+++.++|++++++++|++++|++.++|++||
T Consensus 465 ~--~~~~~~~~~~g~g~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~ 538 (723)
T 3j09_A 465 L--GEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKE 538 (723)
T ss_dssp C--CSCCCCEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCT
T ss_pred c--CCccceEEecCCceEE----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEECCEEEEEEeecCCcch
Confidence 5 4567888999999987 66889999998776665432 256778899999999999999999999999999
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCcccHHHHHHCC
Q 038599 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~ND~~al~~Ad 315 (473)
+++++|++||++|++++|+|||+..++..+++++|++ .++++++|++|.++|+.||++..|+|+|||.||+|||++||
T Consensus 539 ~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--~~~~~~~P~~K~~~v~~l~~~~~v~~vGDg~ND~~al~~A~ 616 (723)
T 3j09_A 539 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQAD 616 (723)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCTTCHHHHHHHHTTTCCEEEEECSSTTHHHHHHSS
T ss_pred hHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc--EEEccCCHHHHHHHHHHHhcCCeEEEEECChhhHHHHhhCC
Confidence 9999999999999999999999999999999999998 99999999999999999998888999999999999999999
Q ss_pred eeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hHHHHHHHH
Q 038599 316 IGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAG-------YPLVWVAVL 388 (473)
Q Consensus 316 vgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g-------~~~~~~a~l 388 (473)
+||+|| ++++.++++||++++++++.++++++++||++++++++|+.|++.||+++++++++| +.+||.+.+
T Consensus 617 vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~~~~~~~g~~l~p~~a~~ 695 (723)
T 3j09_A 617 LGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGL 695 (723)
T ss_dssp EEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCSCCHHHHHH
T ss_pred EEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCHHHHHH
Confidence 999999 999999999999999999999999999999999999999999999999999999988 568999999
Q ss_pred HHHHHHHHHHHHhHhhhccccccc
Q 038599 389 TDVGTCLVVILNSMLLLKNNLEEE 412 (473)
Q Consensus 389 ~~~~s~l~v~~ns~~l~~~~~~~~ 412 (473)
.|.+|+++|++||+|+++++++..
T Consensus 696 ~m~~ss~~vv~nslrl~~~~~~~~ 719 (723)
T 3j09_A 696 AMAMSSVSVVANSLLLRNYVPPIR 719 (723)
T ss_dssp HHHTHHHHHHHHTTSCCCCSCSTT
T ss_pred HHhccHHHHHHHHHHhccCCCchh
Confidence 999999999999999988876543
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-64 Score=551.67 Aligned_cols=386 Identities=31% Similarity=0.398 Sum_probs=332.6
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchh--HHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPL--QSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~--~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~la 79 (473)
+++++|+.|++++++++.++.+..+...+. .+...+++++...|..++...++ ++..++.+++
T Consensus 244 d~~~~~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~---------------a~~~~~~~~a 308 (645)
T 3j08_A 244 DKVVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPT---------------ALTVGMGKGA 308 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHH---------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHH---------------HHHHHHHHHH
Confidence 355677777777776665443211100000 11222333333344444433333 8899999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
|+|+++|+++++|++|++|++|||||||||+|+|+|.++... +.+.++++.+++++|..++||+++|+++++++.+..
T Consensus 309 ~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~--~~~~~~~l~~aa~~e~~s~hPla~Aiv~~a~~~g~~ 386 (645)
T 3j08_A 309 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL--NGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIE 386 (645)
T ss_dssp TTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEES--SSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCC
T ss_pred HCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeC--CCCHHHHHHHHHHHhhcCCChhHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999886 357889999999999999999999999999998876
Q ss_pred CCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcch----hHHHHhcCCceeeEeeeCCeEEEEEEecCccCC
Q 038599 160 PVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDS----IAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRS 235 (473)
Q Consensus 160 ~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~----~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~ 235 (473)
. ....+++.++|+|+.+ +.+.+|+++++.+.+....+ ..+++.++|++++++++|++++|++.++|++||
T Consensus 387 ~--~~~~~~~~~~g~g~~~----~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~ 460 (645)
T 3j08_A 387 L--GEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKE 460 (645)
T ss_dssp C--CSCCCCEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCCCEEEEETTEEEEEEEEECCCTT
T ss_pred c--CCccceEEecCCceEE----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEECCEEEEEEEecCCchh
Confidence 5 4567888999999987 56889999988776665432 246678899999999999999999999999999
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCcccHHHHHHCC
Q 038599 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~ND~~al~~Ad 315 (473)
+++++|++||++|++++|+|||+..++.++++++|++ .++++++|++|.++++.||++..|+|+|||.||+|||++||
T Consensus 461 ~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--~~~~~~~P~~K~~~v~~l~~~~~v~~vGDg~ND~~al~~A~ 538 (645)
T 3j08_A 461 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQAD 538 (645)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCTTCHHHHHHHHTTTCCEEEEECSSSCHHHHHHSS
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--EEEEeCCHHhHHHHHHHHhhCCeEEEEeCCHhHHHHHHhCC
Confidence 9999999999999999999999999999999999998 99999999999999999998888999999999999999999
Q ss_pred eeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hHHHHHHHH
Q 038599 316 IGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAG-------YPLVWVAVL 388 (473)
Q Consensus 316 vgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g-------~~~~~~a~l 388 (473)
+||+|| ++++.++++||++++++++.++++++++||++++++++|+.|++.||+++++++++| +.+||.+.+
T Consensus 539 vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~~~~~~g~~l~p~~a~~ 617 (645)
T 3j08_A 539 LGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGL 617 (645)
T ss_dssp EEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTCCCSCCHHHHHH
T ss_pred EEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccccCHHHHHH
Confidence 999999 999999999999999999999999999999999999999999999999999999988 568999999
Q ss_pred HHHHHHHHHHHHhHhhhcccccccC
Q 038599 389 TDVGTCLVVILNSMLLLKNNLEEEG 413 (473)
Q Consensus 389 ~~~~s~l~v~~ns~~l~~~~~~~~~ 413 (473)
.|.+|+++|++||+|+++++++...
T Consensus 618 ~m~~ss~~vv~nslrl~~~~~~~~~ 642 (645)
T 3j08_A 618 AMAMSSVSVVANSLLLRNYVPPIRR 642 (645)
T ss_dssp HHHTHHHHHHHHTTSCCCCSCSTTS
T ss_pred HHhcchHHHHHhhHHhccCCCchhc
Confidence 9999999999999999888765433
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-57 Score=503.33 Aligned_cols=348 Identities=21% Similarity=0.287 Sum_probs=279.4
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
.++++++++..|+.||...++ +++.++.+|+|+|+++|+++++|+||++|+||||||||||+|+|
T Consensus 324 ~~av~llV~aiP~aLp~~vti---------------~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m 388 (920)
T 1mhs_A 324 EFTLAITIIGVPVGLPAVVTT---------------TMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKL 388 (920)
T ss_dssp HHHHHHHHHHSCCCHHHHHHH---------------HHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCS
T ss_pred HHHHHHHHHhCchhHHHHHHH---------------HHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccce
Confidence 345666677788888877766 88999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCCHHHHHHHHH-hhhccCC--ChHHHHHHHHHHHcCCCCC---CCCccccccc--cCCceeEEe---cC
Q 038599 114 TVTDFQSICDDVSLGTLLYWVS-SIESKSS--HPMAAALVDYARSLAIEPV---PENVEDFQNF--PGEGIFGKI---HG 182 (473)
Q Consensus 114 ~V~~i~~~~~~~~~~~ll~~~a-~~e~~s~--hpi~~Ai~~~a~~~~~~~~---~~~v~~~~~~--~g~gv~~~v---~g 182 (473)
+|.+++..+ ++++++++..++ +.+..++ ||++.|+++++++.+.... .....++.++ .++++.+.+ +|
T Consensus 389 ~v~~~~~~~-g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g 467 (920)
T 1mhs_A 389 SLHDPYTVA-GVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQG 467 (920)
T ss_dssp CCCCCBCCS-CCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSS
T ss_pred eEEEEeecC-CCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeCCC
Confidence 999987653 344445543332 2344455 9999999999876543210 0112222222 467788877 34
Q ss_pred e--EEEEccccccCCCCCC---c--------chhHHHHhcCCceeeEeeeC-----CeEEEEEEecCccCCchHHHHHHH
Q 038599 183 N--VIYIGNRRIGPRTGCS---K--------DSIAEAKCTGGKTRGYVYLG-----ATPVGTFSLSDSCRSGALEAIKDL 244 (473)
Q Consensus 183 ~--~~~iG~~~~~~~~~~~---~--------~~~~~~~~~~G~~vi~va~d-----~~~lG~i~l~d~lr~~a~~~I~~L 244 (473)
+ .+.+|+++++.+.+.. . .+..++++++|+|+++++++ .+|+|+++++|++||+++++|++|
T Consensus 468 ~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l 547 (920)
T 1mhs_A 468 ERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEA 547 (920)
T ss_dssp SCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHH
T ss_pred cEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHH
Confidence 4 3557999887542211 1 12356788999999999965 389999999999999999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---------------------------ceehccChhhHHHHHHHHhhCC-
Q 038599 245 KSLGIKSFILAGDSHAAALYAQDQLDHAFD---------------------------MVYAELLPQHKEELVELLKKDG- 296 (473)
Q Consensus 245 ~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---------------------------~v~a~~~P~~K~~~v~~l~~~g- 296 (473)
|++|++++|+|||+..+|.++|+++||... .+|++++|+||.++|+.||++|
T Consensus 548 ~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~ 627 (920)
T 1mhs_A 548 KTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGY 627 (920)
T ss_dssp HHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTC
T ss_pred hhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999631 4899999999999999999999
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 297 ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLA 376 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la 376 (473)
.|+|+|||.||+|||++||+||+|| +|++.++++||+++++++++.+++++++||++++|+++++.|.+..|+....+.
T Consensus 628 ~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~ 706 (920)
T 1mhs_A 628 LVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFL 706 (920)
T ss_dssp CCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999 899999999999999999999999999999999999999999999988542221
Q ss_pred -----HHhh-----HHHHHHHHHHHHHHHHHHH
Q 038599 377 -----VAGY-----PLVWVAVLTDVGTCLVVIL 399 (473)
Q Consensus 377 -----~~g~-----~~~~~a~l~~~~s~l~v~~ 399 (473)
++|+ +.+|.+++++. +++.+.+
T Consensus 707 ~~~~~~~~~~l~~~~il~~~l~~d~-~~lal~~ 738 (920)
T 1mhs_A 707 GLWIAILNRSLNIELVVFIAIFADV-ATLAIAY 738 (920)
T ss_dssp HHHHHSCSCCCCHHHHHHHHHHHTT-HHHHCCC
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHH-Hhhhhcc
Confidence 1222 24678888775 5554443
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-57 Score=501.92 Aligned_cols=322 Identities=21% Similarity=0.254 Sum_probs=264.0
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
..+++++++..|+.||...++ +++.++.+|+|+|+++|+++++|++|++|+||||||||||+|+|
T Consensus 275 ~~~v~llv~aiP~aLp~~vti---------------~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m 339 (885)
T 3b8c_A 275 DNLLVLLIGGIPIAMPTVLSV---------------TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 339 (885)
T ss_dssp HHHHHHTTTTCCSSTTTHHHH---------------TTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCC
T ss_pred HHHHHHHHHHhhhHHHHHHHH---------------HHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCce
Confidence 456677778888989877766 78889999999999999999999999999999999999999999
Q ss_pred EEEEEE--ecCCCCCHHHHHHHHHhhhcc-CCChHHHHHHHHHHHcCC-C--CCCCCccccccccCC-ceeEE-ecCe--
Q 038599 114 TVTDFQ--SICDDVSLGTLLYWVSSIESK-SSHPMAAALVDYARSLAI-E--PVPENVEDFQNFPGE-GIFGK-IHGN-- 183 (473)
Q Consensus 114 ~V~~i~--~~~~~~~~~~ll~~~a~~e~~-s~hpi~~Ai~~~a~~~~~-~--~~~~~v~~~~~~~g~-gv~~~-v~g~-- 183 (473)
+|.+.. ...++.+.++++.+++..+.. ++||++.|+++++.+... . .......+|.....+ .+... .+|+
T Consensus 340 ~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~ 419 (885)
T 3b8c_A 340 SVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWH 419 (885)
T ss_dssp CCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBC
T ss_pred EEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCcccceEEEEEEecCCcEE
Confidence 997422 233455777888888777764 899999999998753110 0 000111122221111 11111 2444
Q ss_pred EEEEccccccCCCCC-------CcchhHHHHhcCCceeeEeeeC-------------CeEEEEEEecCccCCchHHHHHH
Q 038599 184 VIYIGNRRIGPRTGC-------SKDSIAEAKCTGGKTRGYVYLG-------------ATPVGTFSLSDSCRSGALEAIKD 243 (473)
Q Consensus 184 ~~~iG~~~~~~~~~~-------~~~~~~~~~~~~G~~vi~va~d-------------~~~lG~i~l~d~lr~~a~~~I~~ 243 (473)
.+.+|+++.+.+.+. ...+..++++++|+|+++++++ ++|+|+++++|++|||++++|++
T Consensus 420 ~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~ 499 (885)
T 3b8c_A 420 RVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRR 499 (885)
T ss_dssp BCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_pred EEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHH
Confidence 355799998765432 1123357789999999999864 58999999999999999999999
Q ss_pred HHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc----------------------------ceehccChhhHHHHHHHHhhC
Q 038599 244 LKSLGIKSFILAGDSHAAALYAQDQLDHAFD----------------------------MVYAELLPQHKEELVELLKKD 295 (473)
Q Consensus 244 L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~----------------------------~v~a~~~P~~K~~~v~~l~~~ 295 (473)
||++|++++|+|||+..+|.++|+++||..+ .+|++++|+||.++|+.||++
T Consensus 500 l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~ 579 (885)
T 3b8c_A 500 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER 579 (885)
T ss_dssp HHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHT
T ss_pred HHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHC
Confidence 9999999999999999999999999999521 279999999999999999999
Q ss_pred C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 296 G-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGA 371 (473)
Q Consensus 296 g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~ 371 (473)
| .|+|+|||.||+|||++||+||+|| +|++.++++||+++++++++.+++++++||++++++++|+.|++.+|+.
T Consensus 580 g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~ 655 (885)
T 3b8c_A 580 KHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 655 (885)
T ss_dssp TCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 8999999999999999999999998 8999999999999999999999999999999999999999999999984
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-53 Score=483.11 Aligned_cols=383 Identities=19% Similarity=0.191 Sum_probs=287.9
Q ss_pred ccCchhHHHHHHHHHHHHHHHHhhhcch-hHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 3 SQKKWPAPSVMASGLLLALSFLGYIYHP-LQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 3 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
++.+++.++++++++++++..+.+.+.. ....++++++++..|+.||...++ +++.++.+|+|+
T Consensus 295 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti---------------~l~~~~~~mak~ 359 (1028)
T 2zxe_A 295 HFIHIITGVAVFLGVSFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTV---------------CLTLTAKRMARK 359 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHH---------------HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHcCchHHHHHHH---------------HHHHHHHHHhhC
Confidence 4566677777666665544322111111 112445566677788888877776 899999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCC----C------------CCH--HHHHHHHHhh-----h
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICD----D------------VSL--GTLLYWVSSI-----E 138 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~----~------------~~~--~~ll~~~a~~-----e 138 (473)
|++||+++++|+||++|+||||||||||+|+|+|.+++..+. + .+. ++++..++.. +
T Consensus 360 ~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~ 439 (1028)
T 2zxe_A 360 NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQ 439 (1028)
T ss_dssp TEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEEC
T ss_pred CceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeee
Confidence 999999999999999999999999999999999999865321 0 011 1334333321 1
Q ss_pred -cc----------CCChHHHHHHHHHHHcCCCC-----CCCCccccccccCCceeE-Ee------cC--eEEEEcccccc
Q 038599 139 -SK----------SSHPMAAALVDYARSLAIEP-----VPENVEDFQNFPGEGIFG-KI------HG--NVIYIGNRRIG 193 (473)
Q Consensus 139 -~~----------s~hpi~~Ai~~~a~~~~~~~-----~~~~v~~~~~~~g~gv~~-~v------~g--~~~~iG~~~~~ 193 (473)
.. .++|.+.|++++++..+... ....+..++..+.+.... .+ ++ ..+.+|+++.+
T Consensus 440 ~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~i 519 (1028)
T 2zxe_A 440 AGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERI 519 (1028)
T ss_dssp TTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHH
T ss_pred cCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHH
Confidence 11 34788889999987653211 001111111111222222 11 23 24668998765
Q ss_pred CCCCC---------Cc--------chhHHHHhcCCceeeEeee------------------------CCeEEEEEEecCc
Q 038599 194 PRTGC---------SK--------DSIAEAKCTGGKTRGYVYL------------------------GATPVGTFSLSDS 232 (473)
Q Consensus 194 ~~~~~---------~~--------~~~~~~~~~~G~~vi~va~------------------------d~~~lG~i~l~d~ 232 (473)
.+.+. .. ....++++++|+|++++++ |++|+|+++++|+
T Consensus 520 l~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dp 599 (1028)
T 2zxe_A 520 LDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDP 599 (1028)
T ss_dssp HTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECC
T ss_pred HHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCC
Confidence 33221 11 1225678899999998863 5689999999999
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--------------------------------------
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------------------------------------- 274 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------------------------------- 274 (473)
+||+++++|++|+++|++++|+|||+..+|.++|+++||..+
T Consensus 600 lr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~ 679 (1028)
T 2zxe_A 600 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLS 679 (1028)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCC
T ss_pred CChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCC
Confidence 999999999999999999999999999999999999999732
Q ss_pred -------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCC
Q 038599 275 -------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSND 340 (473)
Q Consensus 275 -------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~ 340 (473)
.++++++|++|..+|+.+|+.| .|+|+|||.||+|||++||+||+||.+|++.++++||+++.+++
T Consensus 680 ~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~ 759 (1028)
T 2zxe_A 680 TEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDN 759 (1028)
T ss_dssp HHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCC
T ss_pred HHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCC
Confidence 2899999999999999999998 99999999999999999999999986699999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----Hh-------hHHHHHHHHHHHHHHHHHHHH
Q 038599 341 IRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAV----AG-------YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 341 l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~----~g-------~~~~~~a~l~~~~s~l~v~~n 400 (473)
++.+.+++++||++++|+++++.|.+.+|+..+...+ ++ ++.+|.+++++.++++.+.+.
T Consensus 760 ~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e 830 (1028)
T 2zxe_A 760 FASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYE 830 (1028)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999986543322 22 357889988888888776654
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-52 Score=475.24 Aligned_cols=383 Identities=19% Similarity=0.203 Sum_probs=290.3
Q ss_pred ccCchhHHHHHHHHHHHHHHHHhhhcch-hHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 3 SQKKWPAPSVMASGLLLALSFLGYIYHP-LQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 3 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
++.+++.++++++++++++..+.+.+.. ..+++.++++++..|+.||...++ +++.++.||+|+
T Consensus 300 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti---------------~la~~~~rmak~ 364 (1034)
T 3ixz_A 300 HFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTV---------------CLSLTAKRLASK 364 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHH---------------HHHHHHHHHhhC
Confidence 4455666666655555444322211111 123456677788889999988777 899999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCC------------------HHHHHHHHHhh-----h
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVS------------------LGTLLYWVSSI-----E 138 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~------------------~~~ll~~~a~~-----e 138 (473)
|++||+++++|+||++|+||||||||||+|+|+|.+++..+..++ ..+++..++.. +
T Consensus 365 ~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~ 444 (1034)
T 3ixz_A 365 NCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFK 444 (1034)
T ss_pred CeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceec
Confidence 999999999999999999999999999999999999875432110 01223222211 0
Q ss_pred -----------ccCCChHHHHHHHHHHHcCCCCC-----CCCccccccccCCceeEE---e-c---C--eEEEEcccccc
Q 038599 139 -----------SKSSHPMAAALVDYARSLAIEPV-----PENVEDFQNFPGEGIFGK---I-H---G--NVIYIGNRRIG 193 (473)
Q Consensus 139 -----------~~s~hpi~~Ai~~~a~~~~~~~~-----~~~v~~~~~~~g~gv~~~---v-~---g--~~~~iG~~~~~ 193 (473)
...++|.+.|++.+++..+.+.. ...+..++.-..+..... . + + ..+.+|+++.+
T Consensus 445 ~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~i 524 (1034)
T 3ixz_A 445 SGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERV 524 (1034)
T ss_pred cCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHH
Confidence 12358999999999877543311 111112221122221111 1 1 2 24667998766
Q ss_pred CCCCCC---------c--------chhHHHHhcCCceeeEeee------------------------CCeEEEEEEecCc
Q 038599 194 PRTGCS---------K--------DSIAEAKCTGGKTRGYVYL------------------------GATPVGTFSLSDS 232 (473)
Q Consensus 194 ~~~~~~---------~--------~~~~~~~~~~G~~vi~va~------------------------d~~~lG~i~l~d~ 232 (473)
.+.+.. . ....++++.+|+|++.+++ |++|+|+++++|+
T Consensus 525 l~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp 604 (1034)
T 3ixz_A 525 LERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDP 604 (1034)
T ss_pred HHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCC
Confidence 433211 1 1224667889999987652 5689999999999
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--------------------------------------
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------------------------------------- 274 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------------------------------- 274 (473)
+|++++++|++|+++|++++|+|||+..+|.++++++|+..+
T Consensus 605 ~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 684 (1034)
T 3ixz_A 605 PRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMD 684 (1034)
T ss_pred CchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCC
Confidence 999999999999999999999999999999999999999521
Q ss_pred -------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCC
Q 038599 275 -------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSND 340 (473)
Q Consensus 275 -------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~ 340 (473)
.++++.+|++|.++++.+|+.| .|+|+|||.||++||++||+|||||.++++.++++||+|+.+++
T Consensus 685 ~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~ 764 (1034)
T 3ixz_A 685 PSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDN 764 (1034)
T ss_pred HHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCC
Confidence 3899999999999999999999 89999999999999999999999988899999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHh-------hHHHHHHHHHHHHHHHHHHHH
Q 038599 341 IRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLA----VAG-------YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 341 l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la----~~g-------~~~~~~a~l~~~~s~l~v~~n 400 (473)
+.++..++++||++++|+++++.|.+.+|+..+... ++| ++.+|++++++.++++.+.+.
T Consensus 765 ~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e 835 (1034)
T 3ixz_A 765 FASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYE 835 (1034)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999654322 223 246899999999999888874
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-52 Score=474.84 Aligned_cols=382 Identities=20% Similarity=0.229 Sum_probs=287.2
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcc---hh--------HHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYH---PL--------QSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVL 70 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~---~~--------~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a 70 (473)
+++.+++.++++++++++++....++.. .. .+..+++++++..|+.||...++ +
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~---------------~ 319 (995)
T 3ar4_A 255 DEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITT---------------C 319 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHH---------------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHH---------------H
Confidence 3456677777766666554432211100 00 12245556667778888876666 8
Q ss_pred HHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecC---C-------------CCCH-------
Q 038599 71 IFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC---D-------------DVSL------- 127 (473)
Q Consensus 71 ~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~---~-------------~~~~------- 127 (473)
++.++.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+ + .+++
T Consensus 320 la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 399 (995)
T 3ar4_A 320 LALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKN 399 (995)
T ss_dssp HHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEET
T ss_pred HHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccc
Confidence 8899999999999999999999999999999999999999999999986531 0 0000
Q ss_pred ---------HHHHHH--HHhhhc--------------cCCChHHHHHHHHHHHcCC-CCCCCC-----------------
Q 038599 128 ---------GTLLYW--VSSIES--------------KSSHPMAAALVDYARSLAI-EPVPEN----------------- 164 (473)
Q Consensus 128 ---------~~ll~~--~a~~e~--------------~s~hpi~~Ai~~~a~~~~~-~~~~~~----------------- 164 (473)
..+..+ +.++.. ..++|.+.|++.++++.++ ......
T Consensus 400 ~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~ 479 (995)
T 3ar4_A 400 DKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQL 479 (995)
T ss_dssp TEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhh
Confidence 112221 222211 1378999999999987665 110000
Q ss_pred ---c--cccccccCCceeEEe---c-------CeEEEEccccccCCCCCC-----------------cchhHHHH--hcC
Q 038599 165 ---V--EDFQNFPGEGIFGKI---H-------GNVIYIGNRRIGPRTGCS-----------------KDSIAEAK--CTG 210 (473)
Q Consensus 165 ---v--~~~~~~~g~gv~~~v---~-------g~~~~iG~~~~~~~~~~~-----------------~~~~~~~~--~~~ 210 (473)
+ .+|... .+.+...+ + ...+.+|+++.+.+.+.. ..+..+++ +++
T Consensus 480 ~~~~~~~pF~s~-rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~ 558 (995)
T 3ar4_A 480 MKKEFTLEFSRD-RKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRD 558 (995)
T ss_dssp EEEEEEEEEETT-TTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTT
T ss_pred CceEEEeecCCC-CCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhc
Confidence 0 011111 12222222 1 245678888765332211 11224567 889
Q ss_pred CceeeEeee-----------------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 038599 211 GKTRGYVYL-----------------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQD 267 (473)
Q Consensus 211 G~~vi~va~-----------------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~ 267 (473)
|+|++++++ |++|+|+++++|++||+++++|++||++|++++|+|||+..+|.++|+
T Consensus 559 GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~ 638 (995)
T 3ar4_A 559 TLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICR 638 (995)
T ss_dssp CCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred cceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHH
Confidence 999998762 558999999999999999999999999999999999999999999999
Q ss_pred HcCCCcc-----------------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCee
Q 038599 268 QLDHAFD-----------------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 268 ~~gi~~~-----------------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Advg 317 (473)
++||... .++++++|++|.++|+.||++| .|+|+|||.||+|||++||+|
T Consensus 639 ~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advg 718 (995)
T 3ar4_A 639 RIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIG 718 (995)
T ss_dssp HHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEE
T ss_pred HcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeE
Confidence 9999642 3899999999999999999999 999999999999999999999
Q ss_pred EEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhh-------HHHHHH
Q 038599 318 ISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVL----AVAGY-------PLVWVA 386 (473)
Q Consensus 318 Ia~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~l----a~~g~-------~~~~~a 386 (473)
|+|| +|++.++++||++++++++..+++++++||++++++++|+.|.+.+|+..++. +++|+ +.+|++
T Consensus 719 iamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~n 797 (995)
T 3ar4_A 719 IAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVN 797 (995)
T ss_dssp EEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHH
T ss_pred EEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHH
Confidence 9999 99999999999999999999999999999999999999999999999854322 23343 478999
Q ss_pred HHHHHHHHHHHHHH
Q 038599 387 VLTDVGTCLVVILN 400 (473)
Q Consensus 387 ~l~~~~s~l~v~~n 400 (473)
++++.++++.+.++
T Consensus 798 l~~d~~p~l~l~~~ 811 (995)
T 3ar4_A 798 LVTDGLPATALGFN 811 (995)
T ss_dssp HTTTHHHHHHHTTC
T ss_pred HHHHHHHHHhhccC
Confidence 99999888877664
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-45 Score=354.94 Aligned_cols=259 Identities=32% Similarity=0.540 Sum_probs=239.0
Q ss_pred HHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHH
Q 038599 73 CAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDY 152 (473)
Q Consensus 73 ~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~ 152 (473)
.++.+++|+||++|+++++|.++++|+||||||||||+|+|.|.++. +.++++.+++++|..|.||+++|+.++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~------~~~~~l~~~~~~e~~s~hp~a~ai~~~ 77 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI------GDSLSLAYAASVEALSSHPIAKAIVKY 77 (263)
Confidence 57889999999999999999999999999999999999999999875 346789999999999999999999999
Q ss_pred HHHcCCCCCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcchhHHHHhcCCceeeEeeeCCeEEEEEEecCc
Q 038599 153 ARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDS 232 (473)
Q Consensus 153 a~~~~~~~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~ 232 (473)
+++.++.+ ....+++.++|.|+.+.+++..+.+|+++ ++.+ ++++.+..+.|.+.+.|+
T Consensus 78 ~~~~g~~~--~~~~~~~~~~G~g~~~~~~~~~~~~G~~~------------------~~~~-~~~~~~~~~~~~~~~~~~ 136 (263)
T 2yj3_A 78 AKEQGVKI--LEVKDFKEISGIGVRGKISDKIIEVKKAE------------------NNND-IAVYINGEPIASFNISDV 136 (263)
Confidence 98777654 45678888999999999998888888754 3445 677888999999999999
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHH
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPAL 311 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al 311 (473)
++|++.+++++|++.|+++.|+|||+...+..+++++|+. .+|....|++|...++.++..+ .|+|||||.||++++
T Consensus 137 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa 214 (263)
T 2yj3_A 137 PRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ--EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAAL 214 (263)
Confidence 9999999999999999999999999999999999999998 8999999999999999999887 899999999999999
Q ss_pred HHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHH
Q 038599 312 AAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQN 361 (473)
Q Consensus 312 ~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n 361 (473)
++||+|+++| .+++.+.+.+|++++++++..++.+++++|+++++|+||
T Consensus 215 ~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 215 ALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 9999999998 788888899999999999999999999999999999998
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-36 Score=290.46 Aligned_cols=276 Identities=34% Similarity=0.528 Sum_probs=243.3
Q ss_pred eeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCCCCCC
Q 038599 85 VKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPEN 164 (473)
Q Consensus 85 vk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~~~~~ 164 (473)
+|+++++|.+++++.|+||+|||||.|+++|.++...++ +.++++.++++++..+.||+..++.++++..+..+ ..
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~~a~~~~~~~~g~~~--~~ 76 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH--SEDELLQIAASLEARSEHPIAAAIVEEAEKRGFGL--TE 76 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS--CHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCC--CC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC--CHHHHHHHHHHhhccCCCHHHHHHHHHHHhcCCCC--CC
Confidence 589999999999999999999999999999999998855 88899999999999999999999999999888764 34
Q ss_pred ccccccccCCceeEEecCeEEEEccccccCCCCCCcchhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHH
Q 038599 165 VEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDL 244 (473)
Q Consensus 165 v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L 244 (473)
...+..+.+.|+...+++..+..|+++++.+.+.........+..++.+..++..++.++|.+.+.++++|++.++++.|
T Consensus 77 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 156 (280)
T 3skx_A 77 VEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTDESVEKLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKL 156 (280)
T ss_dssp CEEEEEETTTEEEEEETTEEEEEECHHHHHHTTCCCCTTHHHHHTTTCEEEEEEETTEEEEEEEEEEEECTTHHHHHHHH
T ss_pred ccceeecCCCEEEEEECCEEEEEecHHHHHHcCCCchHHHHHHHhCCCeEEEEEECCEEEEEEEecCCCCHhHHHHHHHH
Confidence 56778888999999999999999999888777766666677888899999999999999999999999999999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCcccHHHHHHCCeeEEeCCCC
Q 038599 245 KSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDIGISMGISG 324 (473)
Q Consensus 245 ~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~ND~~al~~AdvgIa~g~~~ 324 (473)
++.|+++.++||++...+..+.+++|+. .+|....|.+|...++.+.+...++|+||+.||.+|++.|++|++|| ++
T Consensus 157 ~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~f~~~~~~~k~~~~k~~~~~~~~~~vGD~~nDi~~~~~Ag~~va~~-~~ 233 (280)
T 3skx_A 157 KAIGIKCMMLTGDNRFVAKWVAEELGLD--DYFAEVLPHEKAEKVKEVQQKYVTAMVGDGVNDAPALAQADVGIAIG-AG 233 (280)
T ss_dssp HHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCGGGHHHHHHHHHTTSCEEEEECTTTTHHHHHHSSEEEECS-CC
T ss_pred HHCCCEEEEEeCCCHHHHHHHHHHcCCh--hHhHhcCHHHHHHHHHHHHhcCCEEEEeCCchhHHHHHhCCceEEec-CC
Confidence 9999999999999999999999999998 89999999999999999998888999999999999999999999998 78
Q ss_pred CccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 325 SALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVT 367 (473)
Q Consensus 325 ~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~ 367 (473)
.+..++.||+++..+++.++..+++++|++++++++|+.|++.
T Consensus 234 ~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 234 TDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred cHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888899999999999999999999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=292.36 Aligned_cols=275 Identities=37% Similarity=0.538 Sum_probs=232.2
Q ss_pred HHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHH
Q 038599 74 AFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYA 153 (473)
Q Consensus 74 a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a 153 (473)
+.++++|+||++|+++++|+++++++|+||||||||.+++.+.+++..++ +.++++.+++++|..+.||++.|+.+++
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~~~~~l~~~~~~e~~s~hp~~~a~~~~~ 86 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--DERELLRLAAIAERRSEHPIAEAIVKKA 86 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--CHHHHHHHHHHHTTTCCSHHHHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--CHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 56889999999999999999999999999999999999999999988754 7889999999999999999999999999
Q ss_pred HHcCCCCCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCc----chhHHHHhcCCceeeEeeeCCeEEEEEEe
Q 038599 154 RSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSK----DSIAEAKCTGGKTRGYVYLGATPVGTFSL 229 (473)
Q Consensus 154 ~~~~~~~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~----~~~~~~~~~~G~~vi~va~d~~~lG~i~l 229 (473)
++.++.+ ....++..+.|.|+.. ..+.+|+++++.+.+... ....+.+.++|.++++++.|+.+.+.+..
T Consensus 87 ~~~g~~~--~~~~~~~~~~G~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~d~~~~~~~~~ 160 (287)
T 3a1c_A 87 LEHGIEL--GEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAV 160 (287)
T ss_dssp HHTTCCC--CCCSCEEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEE
T ss_pred HhcCCCc--cccccceeecCCCeEE----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEe
Confidence 9888764 2345677788888876 446667766654434332 12345677789999999999999999999
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCcccHH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAP 309 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~ND~~ 309 (473)
.++++|++.++++.|++.|+++.++||++...+..+.+++|+. .+|....|+.|...++.|+....++||||+.||.+
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~f~~i~~~~K~~~~~~l~~~~~~~~vGDs~~Di~ 238 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAP 238 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCTTCHHHHHHHHTTTCCEEEEECTTTCHH
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc--eeeeecChHHHHHHHHHHhcCCeEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999998 88999999999999999876567999999999999
Q ss_pred HHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHH
Q 038599 310 ALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLI 359 (473)
Q Consensus 310 al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~ 359 (473)
+++.|+++++++ .+.+...+.+|+++.++++..+..+++.+|+++++|+
T Consensus 239 ~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 239 ALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 999999999998 6666677889999988999999999999999998875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.6e-25 Score=216.56 Aligned_cols=120 Identities=18% Similarity=0.132 Sum_probs=105.1
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------------------ceehccChhh
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------------------------MVYAELLPQH 284 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------------------~v~a~~~P~~ 284 (473)
.+++||+++++++.|+++|++++|+|||...++.++++++|+... ..++...|.+
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence 478999999999999999999999999999999999999998643 2244556888
Q ss_pred HHHHHHHHhhCC-cEEEEcCCcccHHHH---HHCCeeEEeCC------CCCccccccccEEEecCCcccHHHHHH
Q 038599 285 KEELVELLKKDG-ATAMVGDGINDAPAL---AAVDIGISMGI------SGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 285 K~~~v~~l~~~g-~v~mvGDG~ND~~al---~~AdvgIa~g~------~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|...+..+++.+ .|+|+|||+||+||+ +.||+||+||. ++.+.+++++|+|++++++..++.+|-
T Consensus 219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred HHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 988999998887 899999999999994 59999999984 456677999999999999999997664
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.3e-17 Score=146.94 Aligned_cols=129 Identities=19% Similarity=0.204 Sum_probs=103.0
Q ss_pred CCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHc-CCCCCC-----CCccccccccC-Cce
Q 038599 104 KTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSL-AIEPVP-----ENVEDFQNFPG-EGI 176 (473)
Q Consensus 104 KTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~-~~~~~~-----~~v~~~~~~~g-~gv 176 (473)
..||+|-|+++|.++.+. ++.++++++.+++++|..|+||+++||+++++++ ++.... ..+.+|+..+| .|+
T Consensus 13 ~~~tit~gnr~vt~v~~~-~g~~e~elL~lAAs~E~~SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~~Gv 91 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPA-QGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGI 91 (156)
T ss_dssp --------CEEEEEEEEC-TTSCHHHHHHHHHHTTSSCCSHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTEEEE
T ss_pred CCCceecCCCeEEEEEec-CCCCHHHHHHHHHHHhCcCCCHHHHHHHHHHHHhcCCCcccccccccceeeccccCCCCeE
Confidence 479999999999999876 5678999999999999999999999999999988 765421 12478888898 899
Q ss_pred eEEecCeEEEEcc----ccccCCCCCCcc----hhHHHHhcCCceeeEeeeCCeEEEEEEecCccCC
Q 038599 177 FGKIHGNVIYIGN----RRIGPRTGCSKD----SIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRS 235 (473)
Q Consensus 177 ~~~v~g~~~~iG~----~~~~~~~~~~~~----~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~ 235 (473)
.++|+.+++|+ .+++.+.+...+ +..+++.++|+|+++++.|++++|+|.+.|++||
T Consensus 92 --~v~G~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 92 --NIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKG 156 (156)
T ss_dssp --EETTEEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECCCC
T ss_pred --EECCEEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCCCC
Confidence 57999999999 568777666544 2356788999999999999999999999999997
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=5.4e-17 Score=148.88 Aligned_cols=126 Identities=25% Similarity=0.355 Sum_probs=107.9
Q ss_pred CcCCCCceEEEEEEecCC--CCCHHHHHHHHHhhhccCCChHHHHHHHHHHHc-CCCCCCCCccccccccCCceeEEecC
Q 038599 106 GTVTRGEFTVTDFQSICD--DVSLGTLLYWVSSIESKSSHPMAAALVDYARSL-AIEPVPENVEDFQNFPGEGIFGKIHG 182 (473)
Q Consensus 106 GTLT~g~~~V~~i~~~~~--~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~-~~~~~~~~v~~~~~~~g~gv~~~v~g 182 (473)
||||+|+|+|.++..+.+ ..+.++++.+++++|..|+||+++||++|+++. +... ...+.+|+.++|+|+++.++|
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~SeHPlA~AIv~~a~~~~~~~~-~~~~~~f~~i~G~Gv~~~V~g 79 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDTET-LGTCIDFQVVPGCGISCKVTN 79 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSSCHHHHHHHHHHHHHHTCSC-CCCCBCCEEETTTEEEEEECC
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCCCHHHHHHHHHHHhhcCCCC-CCCccceEEeccceEEEEECC
Confidence 899999999999987642 457889999999999999999999999999875 5432 245789999999999999988
Q ss_pred ----------------------------------------------------eEEEEccccccCCCCCCcchh----HHH
Q 038599 183 ----------------------------------------------------NVIYIGNRRIGPRTGCSKDSI----AEA 206 (473)
Q Consensus 183 ----------------------------------------------------~~~~iG~~~~~~~~~~~~~~~----~~~ 206 (473)
+.|.+||++|+.+.++..++. ..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~i~~~~~~~~~~ 159 (185)
T 2kmv_A 80 IEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVINNDVNDFMTE 159 (185)
T ss_dssp SGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTCCCCHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCCCCCHHHHHHHHH
Confidence 689999999998887765432 456
Q ss_pred HhcCCceeeEeeeCCeEEEEEEecCc
Q 038599 207 KCTGGKTRGYVYLGATPVGTFSLSDS 232 (473)
Q Consensus 207 ~~~~G~~vi~va~d~~~lG~i~l~d~ 232 (473)
+..+|.++++++.|+.++|+|.+.|+
T Consensus 160 ~~~~G~T~V~vaidg~l~g~iavaD~ 185 (185)
T 2kmv_A 160 HERKGRTAVLVAVDDELCGLIAIADT 185 (185)
T ss_dssp HHHTTCEEEEEEETTEEEEEEEEECC
T ss_pred HHhCCCeEEEEEECCEEEEEEEEEcC
Confidence 67889999999999999999999985
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-17 Score=152.38 Aligned_cols=126 Identities=18% Similarity=0.225 Sum_probs=109.7
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHHC
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD----G-ATAMVGDGINDAPALAAV 314 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~A 314 (473)
++++|+++|+++.++||++...+..+++++|+. .++... .+|...++.+.++ . .++|+||+.||.++++.|
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~--~~f~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~a 129 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE--HLFQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRV 129 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS--EEECSC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH--HHhcCc--CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHC
Confidence 999999999999999999999999999999998 777765 6788888776654 2 799999999999999999
Q ss_pred CeeEEeCCCCCccccccccEEEecCC----cccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 315 DIGISMGISGSALAMESGHVILMSND----IRKIPKAIKLARKASTKLIQNVTLSVTVKG 370 (473)
Q Consensus 315 dvgIa~g~~~~~~a~~~ad~vl~~~~----l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~ 370 (473)
+++++++ .+.+..++.||+++.+++ +..+.+.+..+|++++++++|+.|++.||-
T Consensus 130 g~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 188 (189)
T 3mn1_A 130 GLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEGHHHHH 188 (189)
T ss_dssp SEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTTC----
T ss_pred CCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhccccccC
Confidence 9999998 788888899999997653 677888999999999999999999999983
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-15 Score=137.60 Aligned_cols=123 Identities=26% Similarity=0.327 Sum_probs=103.7
Q ss_pred CCCCceEEEEEEecCC--CCCHHHHHHHHHhhhccCCChHHHHHHHHHHHc-CCCCCCCCccccccccCCceeEEecCe-
Q 038599 108 VTRGEFTVTDFQSICD--DVSLGTLLYWVSSIESKSSHPMAAALVDYARSL-AIEPVPENVEDFQNFPGEGIFGKIHGN- 183 (473)
Q Consensus 108 LT~g~~~V~~i~~~~~--~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~-~~~~~~~~v~~~~~~~g~gv~~~v~g~- 183 (473)
||+|+|+|.++..+.+ ..+.++++.+++++|..|+||+++||++|+++. +... ...+.+|+.++|+|+++.++|.
T Consensus 1 LT~G~p~V~~v~~~~~~~~~~~~~lL~laaslE~~SeHPlA~AIv~~a~~~~~~~~-~~~~~~f~~i~G~Gv~a~v~g~~ 79 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTET-LGYCTDFQAVPGCGIGCKVSNVE 79 (165)
T ss_dssp CCCCCCCEEEEEECCCTTTSCHHHHHHHHHHHHTTSCSTTHHHHHHHHHHHHTCCC-CCCEEEEEEETTTEEEEEEECHH
T ss_pred CCCceeEEEEEEeeCCcCCCCHHHHHHHHHHHHccCCChHHHHHHHHHHHhcCCCC-CCCcCceEEecCccEEEEEcCcc
Confidence 8999999999987643 247789999999999999999999999999876 5431 2357899999999999999886
Q ss_pred ----------------------------------EEEEccccccCCCCCCcch----hHHHHhcCCceeeEeeeCCeEEE
Q 038599 184 ----------------------------------VIYIGNRRIGPRTGCSKDS----IAEAKCTGGKTRGYVYLGATPVG 225 (473)
Q Consensus 184 ----------------------------------~~~iG~~~~~~~~~~~~~~----~~~~~~~~G~~vi~va~d~~~lG 225 (473)
.|.+||++|+.+.++..++ ....+..+|.++++++.|+.++|
T Consensus 80 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~~~~~~~~~~~~~~~~G~T~v~va~dg~~~g 159 (165)
T 2arf_A 80 GILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTAILVAIDGVLCG 159 (165)
T ss_dssp HHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCSSCHHHHHHHHHHHTTTSEEEEEEETTEEEE
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCCCCHHHHHHHHHHHhCCCeEEEEEECCEEEE
Confidence 8999999999877665432 23456778999999999999999
Q ss_pred EEEecC
Q 038599 226 TFSLSD 231 (473)
Q Consensus 226 ~i~l~d 231 (473)
+|.+.|
T Consensus 160 ~i~l~D 165 (165)
T 2arf_A 160 MIAIAD 165 (165)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 999987
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.45 E-value=9.2e-14 Score=139.17 Aligned_cols=134 Identities=19% Similarity=0.187 Sum_probs=108.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc-----------------ChhhHHHHHHHH--
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL-----------------LPQHKEELVELL-- 292 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~-----------------~P~~K~~~v~~l-- 292 (473)
+++|++.+.++.|++.|+++.++||+....+..+.+++|+. .++... .+..|.+.++.+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~--~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~ 255 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLD--YAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ 255 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCC--eEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence 68999999999999999999999999999999999999997 444321 124555555544
Q ss_pred --hhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 293 --KKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVK 369 (473)
Q Consensus 293 --~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n 369 (473)
+-.. .++|+||+.||.+|++.|++|+++ ++.+..++.||.++..+++.++..+++......+++++|+.|+..||
T Consensus 256 ~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 256 QYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--------
T ss_pred HcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccccccccc
Confidence 3333 799999999999999999999999 68888899999999999999999999999888899999999999998
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.5e-13 Score=124.99 Aligned_cols=114 Identities=17% Similarity=0.199 Sum_probs=90.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHHC
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD----G-ATAMVGDGINDAPALAAV 314 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~A 314 (473)
++++|+++|+++.++||++...+..+++++|+. ++... .+|...++.+.++ . .++|+||+.||.++++.|
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~---~~~~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~a 121 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP---VLHGI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALV 121 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC---EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe---eEeCC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHC
Confidence 999999999999999999999999999999997 55544 6678887776654 2 699999999999999999
Q ss_pred CeeEEeCCCCCccccccccEEEecCCccc----HHHHHHHHHHHHHHHH
Q 038599 315 DIGISMGISGSALAMESGHVILMSNDIRK----IPKAIKLARKASTKLI 359 (473)
Q Consensus 315 dvgIa~g~~~~~~a~~~ad~vl~~~~l~~----l~~~i~~~r~~~~~i~ 359 (473)
+++++++ .+.+..++.||+++.+++..+ +.+.+...|..+.+..
T Consensus 122 g~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~~~~~~~~~~~ 169 (176)
T 3mmz_A 122 GWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREIASWILGPSLDSLDKE 169 (176)
T ss_dssp SEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTTTTC-----
T ss_pred CCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcccccc
Confidence 9999998 778888899999998777544 4444444444444433
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.42 E-value=1e-12 Score=123.25 Aligned_cols=99 Identities=19% Similarity=0.231 Sum_probs=87.5
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHHC
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD----G-ATAMVGDGINDAPALAAV 314 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~A 314 (473)
+++.|+++|+++.++||++...+..+++++|+. .++... .+|...++.+.++ . .++|+||+.||.++++.|
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~--~~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~a 159 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT--HLYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQV 159 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC--EEECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTS
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--hhhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHC
Confidence 999999999999999999999999999999998 778776 6788888877654 3 799999999999999999
Q ss_pred CeeEEeCCCCCccccccccEEEecCCccc
Q 038599 315 DIGISMGISGSALAMESGHVILMSNDIRK 343 (473)
Q Consensus 315 dvgIa~g~~~~~~a~~~ad~vl~~~~l~~ 343 (473)
+++++++ .+.+..++.||+++.+++-.+
T Consensus 160 g~~~a~~-~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 160 GLSVAVA-DAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp SEEEECT-TSCTTTGGGSSEECSSCTTTT
T ss_pred CCEEEeC-CccHHHHhhCCEEEeCCCCCc
Confidence 9999998 788888999999997765333
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.9e-12 Score=117.88 Aligned_cols=131 Identities=20% Similarity=0.158 Sum_probs=106.6
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC-C----cEEEEcCCccc
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD-G----ATAMVGDGIND 307 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~-g----~v~mvGDG~ND 307 (473)
+.++..++|++|+++|++++++||++...+..+.+++|+. .++... ..|...++.+.++ | .++|+||+.||
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~--~~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~~D 111 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFLGK--LEKETACFDLMKQAGVTAEQTAYIGDDSVD 111 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc--eeecCC--CCcHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 4557789999999999999999999999999999999998 666554 4566766655433 2 79999999999
Q ss_pred HHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHH----HHHHHHHHHHHHHHHHHHHHHHH
Q 038599 308 APALAAVDIGISMGISGSALAMESGHVILMSNDIRKIP----KAIKLARKASTKLIQNVTLSVTV 368 (473)
Q Consensus 308 ~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~----~~i~~~r~~~~~i~~n~~~~~~~ 368 (473)
.++++.|+++++++ ++.+..++.||+++.+++..++. +.+...|..+++++.++.|+...
T Consensus 112 i~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 175 (180)
T 1k1e_A 112 LPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVFDTAQGFLKSV 175 (180)
T ss_dssp HHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHHHCHHHHHHHG
T ss_pred HHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhhhhccchhhhh
Confidence 99999999999997 77888889999999877655555 44455666788888888887654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=120.85 Aligned_cols=151 Identities=16% Similarity=0.135 Sum_probs=115.9
Q ss_pred CCceeeEeeeCCeEEEEEEecCccCCchHHH-------HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc--
Q 038599 210 GGKTRGYVYLGATPVGTFSLSDSCRSGALEA-------IKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL-- 280 (473)
Q Consensus 210 ~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~-------I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~-- 280 (473)
++.+.+.+..|+++..--...++..++.++. ++.|+++|+++.++||++...+..+.+++|+. .++...
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~--~~~~~~kp 94 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT--HYYKGQVD 94 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC--EEECSCSS
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc--cceeCCCC
Confidence 3466777778887654111223334555555 99999999999999999999999999999998 777766
Q ss_pred ChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCC----cccHHHHHHHHHHHH
Q 038599 281 LPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSND----IRKIPKAIKLARKAS 355 (473)
Q Consensus 281 ~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~----l~~l~~~i~~~r~~~ 355 (473)
.|+-...+++.+.-.. .++|+||+.||.++++.|+++++++ ++.+..++.||+++.+++ +..+.+.+...|..+
T Consensus 95 k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~ 173 (191)
T 3n1u_A 95 KRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKA 173 (191)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcH
Confidence 3445555555555444 7999999999999999999999997 778888899999998777 445666666777777
Q ss_pred HHHHHHHH
Q 038599 356 TKLIQNVT 363 (473)
Q Consensus 356 ~~i~~n~~ 363 (473)
.+..+++.
T Consensus 174 ~~~~~~~~ 181 (191)
T 3n1u_A 174 ELAITGYL 181 (191)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-12 Score=119.63 Aligned_cols=129 Identities=13% Similarity=0.131 Sum_probs=102.8
Q ss_pred CCceeeEeeeCCeEEEEEEecCccCCchHHH-------HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccCh
Q 038599 210 GGKTRGYVYLGATPVGTFSLSDSCRSGALEA-------IKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLP 282 (473)
Q Consensus 210 ~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~-------I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P 282 (473)
++.+.+++..|++++.--...++.++++++. |+.|+++|+++.++||++...+..+++++|+. .+|...
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~--~~~~~~-- 98 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGIS--LIYQGQ-- 98 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC--EEECSC--
T ss_pred hCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc--EEeeCC--
Confidence 3567788888887765211223334555555 99999999999999999999999999999998 777766
Q ss_pred hhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCccc
Q 038599 283 QHKEELVELLKKD----G-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRK 343 (473)
Q Consensus 283 ~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~ 343 (473)
.+|...++.+.++ . .++|+||+.||.++++.|+++++++ ++.+..++.||+++.+++-.+
T Consensus 99 k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G 163 (195)
T 3n07_A 99 DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHG 163 (195)
T ss_dssp SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTT
T ss_pred CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCC
Confidence 4566666665443 2 7999999999999999999999998 788889999999998776555
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.8e-11 Score=110.52 Aligned_cols=112 Identities=19% Similarity=0.205 Sum_probs=91.8
Q ss_pred eeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HcCCCccceehccChhhHHHHHHHHhhC
Q 038599 218 YLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQD--QLDHAFDMVYAELLPQHKEELVELLKKD 295 (473)
Q Consensus 218 a~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~--~~gi~~~~v~a~~~P~~K~~~v~~l~~~ 295 (473)
..++..++.|.++|. .+|+.|+++|+++.++||+ ..+..+++ ++|+. ++.. +++|...++.+.++
T Consensus 28 ~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~---~~~g--~~~K~~~l~~~~~~ 94 (168)
T 3ewi_A 28 SGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK---TEVS--VSDKLATVDEWRKE 94 (168)
T ss_dssp CSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---EECS--CSCHHHHHHHHHHH
T ss_pred cCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---EEEC--CCChHHHHHHHHHH
Confidence 344556677777776 4899999999999999999 67788888 67774 4433 46899888877654
Q ss_pred -C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCccc
Q 038599 296 -G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRK 343 (473)
Q Consensus 296 -g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~ 343 (473)
| .++|+||+.||.++++.|+++++|+ ++.+..++.||+++.+++-.+
T Consensus 95 ~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G 146 (168)
T 3ewi_A 95 MGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRG 146 (168)
T ss_dssp TTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTT
T ss_pred cCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCcc
Confidence 2 6999999999999999999999997 888999999999998776555
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.13 E-value=6.7e-11 Score=111.83 Aligned_cols=133 Identities=14% Similarity=0.128 Sum_probs=106.9
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------cee---hc---
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------MVY---AE--- 279 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------~v~---a~--- 279 (473)
+.+++-.|++++. -...+.+++.++|++|+++|++++++||++...+..+++++|+... .++ .+
T Consensus 6 kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~ 82 (227)
T 1l6r_A 6 RLAAIDVDGNLTD---RDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKK 82 (227)
T ss_dssp CEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEE
T ss_pred EEEEEECCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEE
Confidence 4566667777754 2456788999999999999999999999999999999999998631 011 01
Q ss_pred ----------------------------------------------------------------cCh--hhHHHHHHHHh
Q 038599 280 ----------------------------------------------------------------LLP--QHKEELVELLK 293 (473)
Q Consensus 280 ----------------------------------------------------------------~~P--~~K~~~v~~l~ 293 (473)
..| .+|...++.+.
T Consensus 83 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~ 162 (227)
T 1l6r_A 83 FFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLK 162 (227)
T ss_dssp SSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHH
T ss_pred EeccHHHHHHHHHHHHHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHH
Confidence 113 58888888876
Q ss_pred hC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 294 KD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 294 ~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
++ | .++++||+.||.++++.|++|++|+ ++.+..++.||+++.+++-.++.++++
T Consensus 163 ~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 163 EMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp HHTTCCGGGEEEECCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HHhCcCHHHEEEECCcHHhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 54 2 6999999999999999999999998 788888889999998877778877765
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=9.1e-11 Score=104.54 Aligned_cols=106 Identities=20% Similarity=0.192 Sum_probs=88.2
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHH
Q 038599 239 EAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD----G-ATAMVGDGINDAPALAA 313 (473)
Q Consensus 239 ~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~ 313 (473)
.+++.|++.|+++.++||++...+..+.+++|+. .++.... .|...++.+.++ . .++|+||+.||.++++.
T Consensus 38 ~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~~~~~k--pk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ 113 (164)
T 3e8m_A 38 AGIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD--YLFQGVV--DKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKR 113 (164)
T ss_dssp HHHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS--EEECSCS--CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTT
T ss_pred HHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC--EeecccC--ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence 3799999999999999999999999999999998 6776654 455555544332 2 79999999999999999
Q ss_pred CCeeEEeCCCCCccccccccEEEecCCccc-HHHHHH
Q 038599 314 VDIGISMGISGSALAMESGHVILMSNDIRK-IPKAIK 349 (473)
Q Consensus 314 AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~-l~~~i~ 349 (473)
|+++++++ ++.+..++.||+++.+++..+ +.++++
T Consensus 114 ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 114 VGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp SSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred CCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 99999997 788888999999998888666 555443
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=7.8e-10 Score=101.19 Aligned_cols=105 Identities=16% Similarity=0.163 Sum_probs=85.5
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHC
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD-G----ATAMVGDGINDAPALAAV 314 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~A 314 (473)
++++|++.|+++.++||++...+..+.+++|+. .++.... .|...++.+.++ | .++|+||+.||.++++.|
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~--~~~~~~k--pk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~a 136 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGIT--HLYQGQS--NKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKV 136 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC--EEECSCS--CSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTS
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc--eeecCCC--CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 899999999999999999999999999999998 6776544 455555555433 2 799999999999999999
Q ss_pred CeeEEeCCCCCccccccccEEEecCCcccHH-HHHH
Q 038599 315 DIGISMGISGSALAMESGHVILMSNDIRKIP-KAIK 349 (473)
Q Consensus 315 dvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~-~~i~ 349 (473)
+++++++ ++.+..++.||+++.+.+-.++. ++++
T Consensus 137 g~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 137 GLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp SEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred CCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 9999997 66777778899999776555555 5544
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.05 E-value=3.9e-10 Score=116.12 Aligned_cols=122 Identities=21% Similarity=0.240 Sum_probs=106.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc-----------------ChhhHHHHHHHHhh
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL-----------------LPQHKEELVELLKK 294 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~-----------------~P~~K~~~v~~l~~ 294 (473)
+++|++.+.++.|++.|+++.++||.....+..+.+++|+. .+++.. .++.|.++++.+.+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~--~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLD--YVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCS--EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcc--ceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 78999999999999999999999999999999999999997 555431 26788888877654
Q ss_pred C-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHH
Q 038599 295 D-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTK 357 (473)
Q Consensus 295 ~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~ 357 (473)
+ | .++|+||+.||.++++.|++|+++ ++.+..++.||+++..+++..+..++.++|+-+..
T Consensus 334 ~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~ 399 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEA 399 (415)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHH
T ss_pred HcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHH
Confidence 3 3 699999999999999999999999 57778888999999999999999999888766544
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.96 E-value=8.7e-10 Score=101.70 Aligned_cols=117 Identities=22% Similarity=0.271 Sum_probs=96.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc-----------------ChhhHHHHHHHHh
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL-----------------LPQHKEELVELLK 293 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~-----------------~P~~K~~~v~~l~ 293 (473)
-+++|++.+.++.|++.|+++.++|+.....+..+.+++|+. .++... ....|...++.+.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~ 151 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLD--AAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQ 151 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcc--hhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence 458899999999999999999999999999999999999997 444332 2456777777655
Q ss_pred hC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHH
Q 038599 294 KD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 294 ~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~ 351 (473)
++ | .++|+||+.||.++++.|++++++ ++.+..++.||+++.++++..+..++.+-
T Consensus 152 ~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 152 RLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp HHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred HHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 43 2 699999999999999999999999 57777889999999999999888776544
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.6e-09 Score=106.11 Aligned_cols=114 Identities=18% Similarity=0.242 Sum_probs=96.0
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc-----------------ChhhHHHHHHHHhh
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL-----------------LPQHKEELVELLKK 294 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~-----------------~P~~K~~~v~~l~~ 294 (473)
+++|++.+.++.|++.|+++.++||.....+..+.+++|+. .++... .++.|.+.++.+.+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~--~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~ 256 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLD--YAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA 256 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCC--eEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999997 555532 34677777766543
Q ss_pred C----C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 295 D----G-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 295 ~----g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+ . .++|+||+.||.++++.|++++++ .+.+..++.+|.++..+++..+..+++
T Consensus 257 ~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~--~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 257 RLNIATENIIACGDGANDLPMLEHAGTGIAW--KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred HcCCCcceEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 2 2 799999999999999999999999 467777788999998889988876653
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=2.5e-09 Score=97.78 Aligned_cols=113 Identities=27% Similarity=0.378 Sum_probs=89.7
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-----------------cChhhHHHHHHHHh
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-----------------LLPQHKEELVELLK 293 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-----------------~~P~~K~~~v~~l~ 293 (473)
.++.|+++++++.|++.|+++.++||+....+....+++|+. .++.. ..+.+|...+..+.
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~ 152 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD--YAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 152 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC--eEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHH
Confidence 356789999999999999999999999988888888999986 33321 12357877776655
Q ss_pred hC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHH
Q 038599 294 KD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 294 ~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
++ | .++++||+.||.++++.|+++++++ +.+..+..||+++.++++..+..+
T Consensus 153 ~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 153 KIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGGG
T ss_pred HHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHHh
Confidence 43 3 5999999999999999999999996 555667789999976668776543
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.89 E-value=6.7e-09 Score=92.10 Aligned_cols=113 Identities=15% Similarity=0.167 Sum_probs=87.3
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhh--HHHHHHHHhhCC-cEEEEcCCcccHHH
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQH--KEELVELLKKDG-ATAMVGDGINDAPA 310 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~--K~~~v~~l~~~g-~v~mvGDG~ND~~a 310 (473)
.+++.+++++|++.|+++.++||.+...+..+.+++|+. .++....|.. -..+++.+.-.. .++|+||+.||.++
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~ 115 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE--EIYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEV 115 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC--EEEECC--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH--hhccCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence 466789999999999999999999999999999999997 6665543322 122333333333 79999999999999
Q ss_pred HHHCCeeEEeCCCCCccccccccEEEecCCcccHH-HHHH
Q 038599 311 LAAVDIGISMGISGSALAMESGHVILMSNDIRKIP-KAIK 349 (473)
Q Consensus 311 l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~-~~i~ 349 (473)
++.|++++++. ++.+..++.+|+++.+.+-.++. ++++
T Consensus 116 a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~~~~~ 154 (162)
T 2p9j_A 116 MKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALREVAE 154 (162)
T ss_dssp HHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHHHHHH
T ss_pred HHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHHHHHH
Confidence 99999999986 66777778899999776666655 4443
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.84 E-value=1.7e-09 Score=98.00 Aligned_cols=107 Identities=22% Similarity=0.400 Sum_probs=89.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcccee------------hccChhhHHHHHHHHhhCCcEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVY------------AELLPQHKEELVELLKKDGATA 299 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~------------a~~~P~~K~~~v~~l~~~g~v~ 299 (473)
+++|++.+.++.|++.|+++.++|+++...+..+ +.+|+. .++ ....|..|...++.+ ....++
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l-~~~~~i 154 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDE--FMANRAIFEDGKFQGIRLRFRDKGEFLKRF-RDGFIL 154 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSE--EEEEEEEEETTEEEEEECCSSCHHHHHGGG-TTSCEE
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCch--hheeeEEeeCCceECCcCCccCHHHHHHhc-CcCcEE
Confidence 7899999999999999999999999998888888 999986 221 123457899999999 333899
Q ss_pred EEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 300 MVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 300 mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|+||+.||.++++.|+++++++ ++.+ .||+++ +++..+.++++
T Consensus 155 ~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~--~~~~el~~~l~ 197 (201)
T 4ap9_A 155 AMGDGYADAKMFERADMGIAVG-REIP----GADLLV--KDLKELVDFIK 197 (201)
T ss_dssp EEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEE--SSHHHHHHHHH
T ss_pred EEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEE--ccHHHHHHHHH
Confidence 9999999999999999999997 5544 789998 67777776654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.83 E-value=9.9e-09 Score=99.10 Aligned_cols=135 Identities=20% Similarity=0.268 Sum_probs=102.4
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC---cc--------------
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA---FD-------------- 274 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~---~~-------------- 274 (473)
.+.+++-.||+++- -...+.+.+.++++++++.|+.+.+.||.+...+..+.+++|+. ..
T Consensus 5 ~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~ 81 (279)
T 4dw8_A 5 YKLIVLDLDGTLTN---SKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWES 81 (279)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTT
T ss_pred ceEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCC
Confidence 34566777888752 23456788999999999999999999999999999999999863 10
Q ss_pred ----------------------------cee------hc--------------------------------------cC-
Q 038599 275 ----------------------------MVY------AE--------------------------------------LL- 281 (473)
Q Consensus 275 ----------------------------~v~------a~--------------------------------------~~- 281 (473)
.++ .. ..
T Consensus 82 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 161 (279)
T 4dw8_A 82 KEMMYENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDA 161 (279)
T ss_dssp CCEEEECCCCGGGHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCH
T ss_pred CeEEEEecCCHHHHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCH
Confidence 000 00 00
Q ss_pred -------------------------------h--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCC
Q 038599 282 -------------------------------P--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGIS 323 (473)
Q Consensus 282 -------------------------------P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~ 323 (473)
| .+|...++.+.++ | .++++||+.||.+|++.|++|++|| +
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-n 240 (279)
T 4dw8_A 162 GKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-N 240 (279)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-T
T ss_pred HHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-C
Confidence 1 1445555544433 2 5999999999999999999999999 8
Q ss_pred CCccccccccEEEecCCcccHHHHHHH
Q 038599 324 GSALAMESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 324 ~~~~a~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
+.+..++.||+|+.+++-.++..+++.
T Consensus 241 a~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 241 AQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp SCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 999999999999988888888887763
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=1.7e-08 Score=92.53 Aligned_cols=118 Identities=18% Similarity=0.090 Sum_probs=90.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc----cceehccC------hhhHHHHHHHHhhCC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF----DMVYAELL------PQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~----~~v~a~~~------P~~K~~~v~~l~~~g-~v~m 300 (473)
.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++.-. |+--..+.+.+.-.. .++|
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~ 149 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVM 149 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence 467899999999999999999999999999999999999851 12222211 222233344443333 7999
Q ss_pred EcCCcccHHHHHHCCe-eEEeCCCCCccccccccEEEecCCcccHHHHHHHHH
Q 038599 301 VGDGINDAPALAAVDI-GISMGISGSALAMESGHVILMSNDIRKIPKAIKLAR 352 (473)
Q Consensus 301 vGDG~ND~~al~~Adv-gIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r 352 (473)
+||+.||..+.+.|++ +|+++ ++.+..++.+|+++ +++..+...++..+
T Consensus 150 iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~--~~~~el~~~~~~~~ 199 (205)
T 3m9l_A 150 VGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHA--RDCAQLRDLLSAEG 199 (205)
T ss_dssp EESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEEC--SSHHHHHHHHHHTT
T ss_pred ECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEe--CCHHHHHHHHHhcc
Confidence 9999999999999999 99998 66666778899998 78888888776543
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.6e-08 Score=92.58 Aligned_cols=115 Identities=15% Similarity=0.159 Sum_probs=86.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcccee-----------------hccChhhHHHHHHHH-h
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVY-----------------AELLPQHKEELVELL-K 293 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~-----------------a~~~P~~K~~~v~~l-~ 293 (473)
.++|++.+.++.|++.|+++.++|+.....+..+.+.+|+..+.++ ....|+.|.+.+..+ .
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG 161 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence 3789999999999999999999999999999999999999642222 223456777777665 3
Q ss_pred hCC-cEEEEcCCcccHHHHHH--CCeeEEeCC-CCCccccccccEEEecCCcccHHHHH
Q 038599 294 KDG-ATAMVGDGINDAPALAA--VDIGISMGI-SGSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 294 ~~g-~v~mvGDG~ND~~al~~--AdvgIa~g~-~~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
-.. .++|+||+.||.+++++ +.++++.+. +..+..+..+|+++ +++..+.+++
T Consensus 162 ~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 162 LIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp GCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred CCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 333 89999999999999865 234555441 34455667899998 7777776543
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.77 E-value=3.4e-08 Score=95.81 Aligned_cols=134 Identities=16% Similarity=0.215 Sum_probs=103.7
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD----------------- 274 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~----------------- 274 (473)
.+.+++-.||+++- -...+.+.+.++++++++.|+.+.+.||.+...+..+.+++|+...
T Consensus 6 ~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~ 82 (290)
T 3dnp_A 6 KQLLALNIDGALLR---SNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPF 82 (290)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCS
T ss_pred ceEEEEcCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEE
Confidence 34566777888752 2335678899999999999999999999999999999999998610
Q ss_pred ------------------c-------------eehc------------c-------------------------------
Q 038599 275 ------------------M-------------VYAE------------L------------------------------- 280 (473)
Q Consensus 275 ------------------~-------------v~a~------------~------------------------------- 280 (473)
. +..+ .
T Consensus 83 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 162 (290)
T 3dnp_A 83 FEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIE 162 (290)
T ss_dssp EECCCCHHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEE
T ss_pred EecCCCHHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEE
Confidence 0 0000 0
Q ss_pred ---Ch---------------------------------hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEE
Q 038599 281 ---LP---------------------------------QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 281 ---~P---------------------------------~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa 319 (473)
.+ ..|...++.+.++ | .++++||+.||.+|++.|++|++
T Consensus 163 ~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va 242 (290)
T 3dnp_A 163 VYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVA 242 (290)
T ss_dssp EECCGGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred EeCCHHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEE
Confidence 01 1265666655443 3 69999999999999999999999
Q ss_pred eCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 320 MGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 320 ~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|+ ++.+..++.||+++.+++-.++..+++
T Consensus 243 m~-na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 243 MG-NAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CT-TSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred ec-CCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 98 899999999999998888888888776
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.76 E-value=2e-08 Score=97.62 Aligned_cols=139 Identities=14% Similarity=0.104 Sum_probs=102.8
Q ss_pred HhcCCceeeEeeeCCeEEEEEEecC-ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------
Q 038599 207 KCTGGKTRGYVYLGATPVGTFSLSD-SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD----------- 274 (473)
Q Consensus 207 ~~~~G~~vi~va~d~~~lG~i~l~d-~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~----------- 274 (473)
+.....+.+++-.||+++- -.. .+.+.+.++|++++++|+.+++.||.+...+..+.+++|....
T Consensus 16 ~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~ 92 (283)
T 3dao_A 16 YFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRT 92 (283)
T ss_dssp ---CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEEC
T ss_pred hhccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEE
Confidence 4445567788888988741 122 4678999999999999999999999998887776665554210
Q ss_pred ------------------------c-----------------------------------------------------ee
Q 038599 275 ------------------------M-----------------------------------------------------VY 277 (473)
Q Consensus 275 ------------------------~-----------------------------------------------------v~ 277 (473)
. ++
T Consensus 93 ~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~ 172 (283)
T 3dao_A 93 PKEILKTYPMDEDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVF 172 (283)
T ss_dssp SSCEEEECCCCHHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEE
T ss_pred CCEEEEEecCCHHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEE
Confidence 0 00
Q ss_pred ------------------------------hccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 278 ------------------------------AELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 278 ------------------------------a~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
.+..| .+|...++.+.++ | .++++||+.||.+|++.|++|++|
T Consensus 173 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam 252 (283)
T 3dao_A 173 HPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV 252 (283)
T ss_dssp CSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred cChHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc
Confidence 00001 2466666665543 3 599999999999999999999999
Q ss_pred CCCCCccccccccEEEecCCcccHHHHHH
Q 038599 321 GISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 321 g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
| ++.+..++.||+|+.+++-.++..+++
T Consensus 253 ~-na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 253 S-NARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp T-TSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred C-CCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 8 999999999999998888888887775
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.7e-08 Score=98.18 Aligned_cols=138 Identities=22% Similarity=0.175 Sum_probs=101.7
Q ss_pred hcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------
Q 038599 208 CTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------- 274 (473)
Q Consensus 208 ~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------- 274 (473)
.....+.+++-.||+++- =...+.+.+.++|++++++|+++++.||.+...+..+.+++|++..
T Consensus 17 ~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~ 93 (285)
T 3pgv_A 17 FQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSD 93 (285)
T ss_dssp ----CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTT
T ss_pred ccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCC
Confidence 334456788888998853 2345777899999999999999999999999999999888887521
Q ss_pred ------------------c-----------eehc-------------------------------------------cCh
Q 038599 275 ------------------M-----------VYAE-------------------------------------------LLP 282 (473)
Q Consensus 275 ------------------~-----------v~a~-------------------------------------------~~P 282 (473)
. ++.. ..|
T Consensus 94 ~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~ 173 (285)
T 3pgv_A 94 GQQIFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDH 173 (285)
T ss_dssp SCEEEECCCCHHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCH
T ss_pred CCEEEecCCCHHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCH
Confidence 0 0000 011
Q ss_pred ----------------------------------hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCC
Q 038599 283 ----------------------------------QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGIS 323 (473)
Q Consensus 283 ----------------------------------~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~ 323 (473)
..|...++.+.++ | .++++||+.||.+|++.|++|++|| +
T Consensus 174 ~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-N 252 (285)
T 3pgv_A 174 EHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-N 252 (285)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-T
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-C
Confidence 1355555554433 3 6999999999999999999999999 9
Q ss_pred CCccccccccE--EEecCCcccHHHHHH
Q 038599 324 GSALAMESGHV--ILMSNDIRKIPKAIK 349 (473)
Q Consensus 324 ~~~~a~~~ad~--vl~~~~l~~l~~~i~ 349 (473)
+.+..++.||. ++.+++-.++..+++
T Consensus 253 a~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 253 AHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp SCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 99999999984 666777778877765
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.71 E-value=2.8e-08 Score=92.76 Aligned_cols=119 Identities=18% Similarity=0.242 Sum_probs=89.4
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehcc------ChhhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAEL------LPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~------~P~~K~~~v~~l~~~g-~v~m 300 (473)
..+.|++.+.++.|++.|+++.++|+.....+..+.+++|+.. +.+ .++. .|+--..+++.+.-.. .++|
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~ 182 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVV 182 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 4578999999999999999999999999999999999999852 111 1221 2233344455554444 7999
Q ss_pred EcCCcccHHHHHHCCe---eEEeCCCCCccccc-cccEEEecCCcccHHHHHHHH
Q 038599 301 VGDGINDAPALAAVDI---GISMGISGSALAME-SGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 301 vGDG~ND~~al~~Adv---gIa~g~~~~~~a~~-~ad~vl~~~~l~~l~~~i~~~ 351 (473)
+||+.||..+++.|++ ++++|....+..++ .+|+++ +++..+.++++.+
T Consensus 183 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~ 235 (237)
T 4ex6_A 183 IGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDG 235 (237)
T ss_dssp EESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC
T ss_pred EcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHcc
Confidence 9999999999999999 88887333233333 799998 7899988887654
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.70 E-value=4.8e-08 Score=89.54 Aligned_cols=113 Identities=17% Similarity=0.114 Sum_probs=89.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceeh---------------ccChhhHHHHHHHHhhCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA---------------ELLPQHKEELVELLKKDG 296 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a---------------~~~P~~K~~~v~~l~~~g 296 (473)
++.|++.+.++.|++. +++.++|+.+...+..+.+++|+.. +|. ...|+.|...++.+....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~--~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~ 145 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPT--LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 145 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCC--EEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcc--eecceeEEcCCceEEeeecCCCchHHHHHHHHHhcC
Confidence 5689999999999999 9999999999999999999999873 221 145788999999998776
Q ss_pred -cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.++|+||+.||.++++.|++++.++ ...+......+++. .+++..+..+++
T Consensus 146 ~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~l~ 197 (206)
T 1rku_A 146 YRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPA-VHTYEDLKREFL 197 (206)
T ss_dssp CEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred CEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence 8999999999999999999999984 33333323445531 267777776553
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.9e-08 Score=97.08 Aligned_cols=134 Identities=18% Similarity=0.248 Sum_probs=87.0
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc------------------
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF------------------ 273 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~------------------ 273 (473)
.+.+++-.||+++- -...+.+.+.++++++++.|+.+.+.||.+...+..+.+++|+..
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~ 81 (279)
T 3mpo_A 5 IKLIAIDIDGTLLN---EKNELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISG 81 (279)
T ss_dssp CCEEEECC--------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTS
T ss_pred eEEEEEcCcCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCC
Confidence 34566777888763 234577889999999999999999999999999999999998752
Q ss_pred c--------------------------ceeh-------------------------------------------------
Q 038599 274 D--------------------------MVYA------------------------------------------------- 278 (473)
Q Consensus 274 ~--------------------------~v~a------------------------------------------------- 278 (473)
+ .++.
T Consensus 82 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 161 (279)
T 3mpo_A 82 KVLTNHSLTYEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYP 161 (279)
T ss_dssp CEEEECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCH
T ss_pred CEEEecCCCHHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCH
Confidence 0 0000
Q ss_pred ----------------------------ccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCC
Q 038599 279 ----------------------------ELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGIS 323 (473)
Q Consensus 279 ----------------------------~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~ 323 (473)
+..| .+|...++.+.++ | .++++||+.||.+|++.|++|++|| +
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-n 240 (279)
T 3mpo_A 162 QVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-N 240 (279)
T ss_dssp HHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-C
Confidence 0000 1266555555433 3 5999999999999999999999998 8
Q ss_pred CCccccccccEEEecCCcccHHHHHH
Q 038599 324 GSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 324 ~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+.+..++.||+|+.+++-.++..+++
T Consensus 241 a~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 241 AIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp -CCHHHHHCSCBC------CHHHHHC
T ss_pred CCHHHHHhcceeccCCCccHHHHHHH
Confidence 99999999999998888888887764
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.66 E-value=7e-08 Score=96.15 Aligned_cols=114 Identities=16% Similarity=0.209 Sum_probs=87.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc--------------------------------
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-------------------------------- 279 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-------------------------------- 279 (473)
.+++++.++++.|++ |+.+.++||++...+....+.+++.. .+++.
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRG-ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCS-EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhh-hhcccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 568999999999999 99999999999777777777777731 22111
Q ss_pred --------------------cC--hhhHHHHHHHHhhC-C--cEEEEcCCcccHHHHHHC----CeeEEeCCCCCccccc
Q 038599 280 --------------------LL--PQHKEELVELLKKD-G--ATAMVGDGINDAPALAAV----DIGISMGISGSALAME 330 (473)
Q Consensus 280 --------------------~~--P~~K~~~v~~l~~~-g--~v~mvGDG~ND~~al~~A----dvgIa~g~~~~~~a~~ 330 (473)
.. +.+|...++.++.+ + .|+++||+.||.+|++.| ++||+| ++.+..++
T Consensus 181 l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk~ 258 (332)
T 1y8a_A 181 FRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALK 258 (332)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHT
T ss_pred HHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHHh
Confidence 00 12355555544432 1 399999999999999999 999999 67888899
Q ss_pred cccEEEecCCcccHHHHHH
Q 038599 331 SGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 331 ~ad~vl~~~~l~~l~~~i~ 349 (473)
.||+++.+++..++..+++
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~ 277 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIE 277 (332)
T ss_dssp TCSEEEECSSTHHHHHHHH
T ss_pred hCcEEecCCCCCHHHHHHH
Confidence 9999999888877776654
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.66 E-value=2.5e-08 Score=92.73 Aligned_cols=116 Identities=19% Similarity=0.275 Sum_probs=87.8
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc-------------------ChhhHHHHHHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL-------------------LPQHKEELVEL 291 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~-------------------~P~~K~~~v~~ 291 (473)
-++.|++.++++.|+++|+++.++|+.+...+..+.+++|+..+.++... .+..|...++.
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 164 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL 164 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHH
Confidence 36899999999999999999999999999999999999999742233211 12367777776
Q ss_pred HhhC-C--cEEEEcCCcccHHHHHHCCeeEEeCCCCC-ccccccccEEEecCCcccHHHHH
Q 038599 292 LKKD-G--ATAMVGDGINDAPALAAVDIGISMGISGS-ALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 292 l~~~-g--~v~mvGDG~ND~~al~~AdvgIa~g~~~~-~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
+.++ | .++|+||+.||..+.++|+++|+++.... +.....+|+++ +++..+..++
T Consensus 165 ~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (225)
T 1nnl_A 165 LKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGEL 223 (225)
T ss_dssp HHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC--
T ss_pred HHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHHH
Confidence 6543 4 79999999999999999999888863222 22344688888 6777766544
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.61 E-value=6.1e-08 Score=89.60 Aligned_cols=119 Identities=20% Similarity=0.304 Sum_probs=88.0
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hccC--hhhHHHHHHH----HhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AELL--PQHKEELVEL----LKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~~~--P~~K~~~v~~----l~~~g-~v~m 300 (473)
..+.|++.+.++.|++.|+++.++|+.....+..+.+++|+.. +.++ ++.. ...|...++. +.-.. .+++
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~ 164 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIM 164 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEE
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEE
Confidence 3578999999999999999999999999999999999999862 1121 1111 1234444444 33333 7999
Q ss_pred EcCCcccHHHHHHCCe---eEEeCCCCCccc--cccccEEEecCCcccHHHHHHHHH
Q 038599 301 VGDGINDAPALAAVDI---GISMGISGSALA--MESGHVILMSNDIRKIPKAIKLAR 352 (473)
Q Consensus 301 vGDG~ND~~al~~Adv---gIa~g~~~~~~a--~~~ad~vl~~~~l~~l~~~i~~~r 352 (473)
+||+.||..+++.|++ ++++| .+.... +..+|+++ +++..+.+++...+
T Consensus 165 iGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~--~s~~el~~~~~~~~ 218 (226)
T 3mc1_A 165 IGDREYDVIGALKNNLPSIGVTYG-FGSYEELKNAGANYIV--NSVDELHKKILELR 218 (226)
T ss_dssp EESSHHHHHHHHTTTCCEEEESSS-SSCHHHHHHHTCSEEE--SSHHHHHHHHHTC-
T ss_pred ECCCHHHHHHHHHCCCCEEEEccC-CCCHHHHHHcCCCEEE--CCHHHHHHHHHHHh
Confidence 9999999999999999 77776 333222 47899999 78888888776443
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.57 E-value=1.6e-07 Score=89.55 Aligned_cols=52 Identities=25% Similarity=0.341 Sum_probs=47.7
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 297 ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.++++||+.||.+|++.|++|++|| ++.+..++.||+|+.+++-.++..+++
T Consensus 201 ~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 201 DVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp GEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred HEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 6999999999999999999999998 888889999999998888888887775
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.55 E-value=2e-06 Score=82.19 Aligned_cols=66 Identities=29% Similarity=0.362 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 283 QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 283 ~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.+|...++.+.++ | .++++||+.||.+|++.|++|++|| ++.+..++.||+|+.+++-.++..+++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 263 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALK 263 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence 4788888877654 3 6999999999999999999999999 899999999999999888888888775
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.5e-07 Score=86.18 Aligned_cols=88 Identities=17% Similarity=0.154 Sum_probs=73.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceeh-----------------ccChhhHHHHHHHHhh
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA-----------------ELLPQHKEELVELLKK 294 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a-----------------~~~P~~K~~~v~~l~~ 294 (473)
.++|++.+.++.|++.|+++.++||.....+..+.+++|+. .+++ ...++.|...++.+.+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~ 169 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ--HLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLA 169 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC--EEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--EEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999996 3322 1224678777765432
Q ss_pred -CC-------cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 295 -DG-------ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 295 -~g-------~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
.| .+.|+||+.||.++++.|++++++.
T Consensus 170 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 170 GMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp HTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred HcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 22 6999999999999999999999984
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.52 E-value=3.3e-07 Score=84.97 Aligned_cols=118 Identities=13% Similarity=0.038 Sum_probs=89.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehcc------ChhhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAEL------LPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~------~P~~K~~~v~~l~~~g-~v~m 300 (473)
-.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+ .+.. .|+--..+.+.+.-.. .++|
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 177 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF 177 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence 4568999999999999999999999999999999999999862 111 1111 2223334444454333 7999
Q ss_pred EcCCcccHHHHHHCCeeEEe----CCCCCccccccccEEEecCCcccHHHHHHHH
Q 038599 301 VGDGINDAPALAAVDIGISM----GISGSALAMESGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 301 vGDG~ND~~al~~AdvgIa~----g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~ 351 (473)
|||+.||..+.+.|+++.++ + ...+..+..+|+++ +++..+.+++...
T Consensus 178 vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~--~~~~el~~~l~~~ 229 (233)
T 3umb_A 178 VSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAG--HDMRDLLQFVQAR 229 (233)
T ss_dssp EESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEE--SSHHHHHHHHHC-
T ss_pred EeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEE--CCHHHHHHHHHHh
Confidence 99999999999999999998 4 44444566799999 7898888887643
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.51 E-value=9.8e-08 Score=88.38 Aligned_cols=119 Identities=14% Similarity=0.075 Sum_probs=85.6
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehccC------hhhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAELL------PQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~~------P~~K~~~v~~l~~~g-~v~m 300 (473)
..+.|++.+.++.|++.|+++.++|+..........+.+|+.. +.+ .++.. |+--..+.+.+.-.. .++|
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLV 169 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEE
Confidence 3567899999999999999999999999999999999999863 112 22211 222223333333333 7999
Q ss_pred EcCCcccHHHHHHCCe---eEEeCCCCCccccc-cccEEEecCCcccHHHHHHHH
Q 038599 301 VGDGINDAPALAAVDI---GISMGISGSALAME-SGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 301 vGDG~ND~~al~~Adv---gIa~g~~~~~~a~~-~ad~vl~~~~l~~l~~~i~~~ 351 (473)
|||+.||..+++.|++ ++++|....+..++ .+|+++ +++..+..+++..
T Consensus 170 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 170 IGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp EESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred EeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 9999999999999999 55555233333334 489998 7888888877644
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.51 E-value=4.5e-07 Score=83.15 Aligned_cols=112 Identities=18% Similarity=0.116 Sum_probs=83.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehccC------hhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAELL------PQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~~------P~~K~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.+.++.|++.|+++.++|+........+.+++|+.. +.+ .+... |+--..+.+.+.-.. .++++
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~i 173 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 173 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEE
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 467899999999999999999999999888888889999862 112 12211 233344444444333 79999
Q ss_pred cCCcccHHHHHHCCeeEEe----CCCCCccccccccEEEecCCcccHHH
Q 038599 302 GDGINDAPALAAVDIGISM----GISGSALAMESGHVILMSNDIRKIPK 346 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa~----g~~~~~~a~~~ad~vl~~~~l~~l~~ 346 (473)
||+.||.++++.|++++++ + ++.+..+..||+++ +++..+..
T Consensus 174 GD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~--~~~~el~~ 219 (226)
T 1te2_A 174 EDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKL--SSLTELTA 219 (226)
T ss_dssp ESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEEC--SCGGGCCH
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEE--CCHHHHhH
Confidence 9999999999999999998 4 33444567899998 66666554
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.50 E-value=2.4e-07 Score=89.96 Aligned_cols=133 Identities=17% Similarity=0.189 Sum_probs=99.6
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---c---------------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---D--------------- 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~--------------- 274 (473)
+.+++-.||+++. -...+.+++.++|++|+++|++++++||.+...+..+.+++|+.. .
T Consensus 6 kli~~DlDGTLl~---~~~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~ 82 (282)
T 1rkq_A 6 KLIAIDMDGTLLL---PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADG 82 (282)
T ss_dssp CEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCC
Confidence 4566677888753 233467789999999999999999999999999999999998752 0
Q ss_pred ---------------------------------ceeh--------------------------cc-------------Ch
Q 038599 275 ---------------------------------MVYA--------------------------EL-------------LP 282 (473)
Q Consensus 275 ---------------------------------~v~a--------------------------~~-------------~P 282 (473)
..+. ++ .+
T Consensus 83 ~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 162 (282)
T 1rkq_A 83 STVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEP 162 (282)
T ss_dssp CEEEECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCH
T ss_pred eEEEEecCCHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCH
Confidence 0000 00 00
Q ss_pred ----------------------------------hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCC
Q 038599 283 ----------------------------------QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGIS 323 (473)
Q Consensus 283 ----------------------------------~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~ 323 (473)
.+|...++.+.+. | .++++||+.||.++++.|++|++|+ +
T Consensus 163 ~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n 241 (282)
T 1rkq_A 163 AILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-N 241 (282)
T ss_dssp HHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-T
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-C
Confidence 0344444444332 2 6999999999999999999999998 7
Q ss_pred CCccccccccEEEecCCcccHHHHHH
Q 038599 324 GSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 324 ~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+.+..++.||+++.+++-.++.++++
T Consensus 242 ~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 242 AIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CcHHHHhhCCEEecCCCcchHHHHHH
Confidence 77778889999998777778887765
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.50 E-value=3.2e-07 Score=87.82 Aligned_cols=65 Identities=28% Similarity=0.308 Sum_probs=54.5
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.|...++.+.++ | .++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++..+++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~ 269 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELK 269 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHH
Confidence 366556555433 2 6999999999999999999999998 889999999999998888888887765
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.50 E-value=7e-07 Score=82.97 Aligned_cols=116 Identities=16% Similarity=0.080 Sum_probs=85.5
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc-------cChhhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE-------LLPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~-------~~P~~K~~~v~~l~~~g-~v~m 300 (473)
-++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.. +.++.. ..|+-...+++.+.-.. .++|
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 161 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALI 161 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEE
Confidence 4568999999999999999999999999998999999999852 122221 12344445555554444 7999
Q ss_pred EcCCcccHHHHHHCCee-EEeCC-CCCccccccccEEEecCCcccHHHHHH
Q 038599 301 VGDGINDAPALAAVDIG-ISMGI-SGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 301 vGDG~ND~~al~~Advg-Ia~g~-~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|||+.||..+.+.|++. |.+.. ...... ..+|.++ +++..+..++.
T Consensus 162 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 162 VGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp EESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred ECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 99999999999999987 66541 122222 5688888 77888877664
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.9e-07 Score=91.65 Aligned_cols=65 Identities=23% Similarity=0.214 Sum_probs=55.0
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.|...++.+.++ | .++++||+.||.+|++.|++|++|| ++.+..++.||+|+.+++-.++..+++
T Consensus 228 ~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 228 HKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 466666665543 3 5999999999999999999999998 899999999999998777777887775
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.48 E-value=3.3e-07 Score=87.22 Aligned_cols=118 Identities=17% Similarity=0.178 Sum_probs=83.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---ccee-hc------cChhhHHHHHHHHhhC--CcEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMVY-AE------LLPQHKEELVELLKKD--GATA 299 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v~-a~------~~P~~K~~~v~~l~~~--g~v~ 299 (473)
.+.|++.+.++.|++.|+++.++|++.......+.+++|+.. +.++ ++ ..|+--..+.+.+.-. ..++
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i 182 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMI 182 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEE
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEE
Confidence 467899999999999999999999999888888888776541 1111 11 1233344455555433 2699
Q ss_pred EEcCCcccHHHHHHCC---eeEEeCCCC------------------------Ccccc-ccccEEEecCCcccHHHHHHHH
Q 038599 300 MVGDGINDAPALAAVD---IGISMGISG------------------------SALAM-ESGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 300 mvGDG~ND~~al~~Ad---vgIa~g~~~------------------------~~~a~-~~ad~vl~~~~l~~l~~~i~~~ 351 (473)
++||+.||..+++.|+ +++++| .+ .+..+ ..+|+++ +++..+..++...
T Consensus 183 ~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~~~ 259 (267)
T 1swv_A 183 KVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI--ETMQELESVMEHI 259 (267)
T ss_dssp EEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHHHH
T ss_pred EEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceec--cCHHHHHHHHHHH
Confidence 9999999999999999 566665 33 12222 3489998 7899998887654
Q ss_pred H
Q 038599 352 R 352 (473)
Q Consensus 352 r 352 (473)
.
T Consensus 260 ~ 260 (267)
T 1swv_A 260 E 260 (267)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.48 E-value=2.9e-07 Score=86.65 Aligned_cols=133 Identities=21% Similarity=0.173 Sum_probs=98.1
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------cee--------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------MVY-------- 277 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------~v~-------- 277 (473)
+.+++-.||+++. -...+.+.+.+++++++++|++++++||.+...+..+.+++|++.. .++
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~ 80 (231)
T 1wr8_A 4 KAISIDIDGTITY---PNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFL 80 (231)
T ss_dssp CEEEEESTTTTBC---TTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEES
T ss_pred eEEEEECCCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEe
Confidence 3456667777753 2345678889999999999999999999999999888888876421 000
Q ss_pred ------------------------------------h----------------------------ccCh--hhHHHHHHH
Q 038599 278 ------------------------------------A----------------------------ELLP--QHKEELVEL 291 (473)
Q Consensus 278 ------------------------------------a----------------------------~~~P--~~K~~~v~~ 291 (473)
. +..| ..|...++.
T Consensus 81 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~ 160 (231)
T 1wr8_A 81 ASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEK 160 (231)
T ss_dssp CCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHH
Confidence 0 0011 247667766
Q ss_pred HhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 292 LKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 292 l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+.++ | .++++||+.||.++++.|+++++++ ++.+..++.||+++.+.+-.++.++++
T Consensus 161 ~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 161 ASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp HHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 6543 2 6999999999999999999999998 777777788999986655556666554
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.48 E-value=3.9e-07 Score=86.03 Aligned_cols=114 Identities=16% Similarity=0.127 Sum_probs=83.0
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-----ccCh--hhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-----ELLP--QHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-----~~~P--~~K~~~v~~l~~~g-~v~m 300 (473)
.++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+.. +.+++ ...| +--..+++.+.-.. .++|
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 192 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF 192 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEE
Confidence 3567999999999999999999999999999999999999862 11211 1122 23334555554444 7999
Q ss_pred EcCCcccHHHHHHCCeeEE-eCCC----CCccccccccEEEecCCcccHHHH
Q 038599 301 VGDGINDAPALAAVDIGIS-MGIS----GSALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 301 vGDG~ND~~al~~AdvgIa-~g~~----~~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
+||+.||.++++.|+++.. +. . +.+.....+|+++ +++..+..+
T Consensus 193 vGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~ad~vi--~~~~el~~~ 241 (243)
T 2hsz_A 193 VGDSQNDIFAAHSAGCAVVGLT-YGYNYNIPIAQSKPDWIF--DDFADILKI 241 (243)
T ss_dssp EESSHHHHHHHHHHTCEEEEES-SSCSTTCCGGGGCCSEEE--SSGGGGGGG
T ss_pred EcCCHHHHHHHHHCCCeEEEEc-CCCCchhhhhhCCCCEEE--CCHHHHHHH
Confidence 9999999999999998744 32 2 2334466789998 667776543
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.47 E-value=5.4e-07 Score=83.24 Aligned_cols=117 Identities=12% Similarity=0.046 Sum_probs=86.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehcc------ChhhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAEL------LPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~------~P~~K~~~v~~l~~~g-~v~m 300 (473)
-.+.|++.+.++.|++.|+++.++|+........+.+++|+.. +.+ .++. .|+--..+.+.+.-.. .++|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 174 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILF 174 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEEE
Confidence 4578999999999999999999999999999999999999862 112 2221 1223333444444333 7999
Q ss_pred EcCCcccHHHHHHCCeeEEeCC---CCCccccccccEEEecCCcccHHHHHH
Q 038599 301 VGDGINDAPALAAVDIGISMGI---SGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 301 vGDG~ND~~al~~AdvgIa~g~---~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+||+.||..+.+.|++++++-. ...+..+..+|+++ +++..+..+++
T Consensus 175 iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 224 (230)
T 3um9_A 175 VSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRFS 224 (230)
T ss_dssp EESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTCC
T ss_pred EeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHHH
Confidence 9999999999999999988821 33344556889998 77887776543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.47 E-value=1.8e-06 Score=79.79 Aligned_cols=115 Identities=13% Similarity=0.144 Sum_probs=82.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCCcc--cee-hc----c--ChhhHHHHHHHHhhCC-cE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDS---HAAALYAQDQLDHAFD--MVY-AE----L--LPQHKEELVELLKKDG-AT 298 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~---~~~a~~~a~~~gi~~~--~v~-a~----~--~P~~K~~~v~~l~~~g-~v 298 (473)
.+.|++.+.++.|++.|+++.++|+.. ........+.+|+... .++ ++ . .|+--..+.+.+.-.. .+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 178 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEES 178 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGE
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccce
Confidence 358999999999999999999999999 8888888899998621 111 11 1 1222223333333223 79
Q ss_pred EEEcCCc-ccHHHHHHCCeeEEe---CCCCCccccccccEEEecCCcccHHHHHH
Q 038599 299 AMVGDGI-NDAPALAAVDIGISM---GISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 299 ~mvGDG~-ND~~al~~AdvgIa~---g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+++||+. ||..+++.|++++++ + ...+.....+|+++ +++..+..+++
T Consensus 179 ~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 179 LHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp EEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchH--hhHHHHHHHHH
Confidence 9999999 999999999999988 4 23333445678887 77888887664
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.47 E-value=5.4e-07 Score=81.76 Aligned_cols=113 Identities=14% Similarity=0.142 Sum_probs=84.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehcc------ChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAEL------LPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~------~P~~K~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.+.++.|++.|+++.++|+........+.+++|+.. +.+ .++. .|+--..+.+.+.-.. .++++
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i 168 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALII 168 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEE
Confidence 578999999999999999999999999999999999999862 112 2221 1233344455554443 79999
Q ss_pred cCCcccHHHHHHCCeeEEeCCCC-CccccccccEEEecCCcccHHH
Q 038599 302 GDGINDAPALAAVDIGISMGISG-SALAMESGHVILMSNDIRKIPK 346 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa~g~~~-~~~a~~~ad~vl~~~~l~~l~~ 346 (473)
||+.||..+.+.|+++..+...+ .......+|+++ +++..+.+
T Consensus 169 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~--~~~~el~~ 212 (214)
T 3e58_A 169 EDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLL--DSLTDVLD 212 (214)
T ss_dssp ECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEE--SSGGGGGG
T ss_pred eccHhhHHHHHHCCCEEEEECCCCccchhccHHHHH--HHHHHHHh
Confidence 99999999999999987775333 344447789998 67777654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.46 E-value=6.3e-07 Score=82.13 Aligned_cols=114 Identities=16% Similarity=0.088 Sum_probs=78.4
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-hccC----h--hhHHHHHHHHhhCC-cEEEEc
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-AELL----P--QHKEELVELLKKDG-ATAMVG 302 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~~~----P--~~K~~~v~~l~~~g-~v~mvG 302 (473)
+.|++.+.++.|++.|+++.++|+..........+++|+... .++ ++.. | +--..+.+.+.-.. .++++|
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iG 169 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIG 169 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEc
Confidence 468999999999999999999999999888888899997621 222 2211 2 22223333333333 799999
Q ss_pred CCcccHHHHHHCCeeEEe----CCCCCcccccc-ccEEEecCCcccHHHHHH
Q 038599 303 DGINDAPALAAVDIGISM----GISGSALAMES-GHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 303 DG~ND~~al~~AdvgIa~----g~~~~~~a~~~-ad~vl~~~~l~~l~~~i~ 349 (473)
|+.||.++++.|++++++ + ...+..+.. +|+++ +++..+...++
T Consensus 170 D~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~--~~~~el~~~l~ 218 (225)
T 3d6j_A 170 DSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRII--STLGQLISVPE 218 (225)
T ss_dssp SSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEE--SSGGGGC----
T ss_pred CCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEE--CCHHHHHHhhh
Confidence 999999999999998776 3 223333333 89988 66777766654
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.6e-07 Score=94.05 Aligned_cols=100 Identities=13% Similarity=0.126 Sum_probs=77.2
Q ss_pred CeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC----Cccceehc-----------------
Q 038599 221 ATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDH----AFDMVYAE----------------- 279 (473)
Q Consensus 221 ~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi----~~~~v~a~----------------- 279 (473)
+...+...-...++|++++.|+.||++|++++|+||.....++.+|+++|+ +.++|++.
T Consensus 210 g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~ 289 (385)
T 4gxt_A 210 GRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKD 289 (385)
T ss_dssp CCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTT
T ss_pred ceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCc
Confidence 344445555566899999999999999999999999999999999999874 33444321
Q ss_pred ---cChhhHHHHHHHHhhC--C--cEEEEcCCcccHHHHHH-CCeeEEe
Q 038599 280 ---LLPQHKEELVELLKKD--G--ATAMVGDGINDAPALAA-VDIGISM 320 (473)
Q Consensus 280 ---~~P~~K~~~v~~l~~~--g--~v~mvGDG~ND~~al~~-AdvgIa~ 320 (473)
...+.|...|+.+-.. | .++++|||.||.+||++ +|.++.+
T Consensus 290 ~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 290 FPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp SCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred cceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 1246799999886432 3 68999999999999997 5655544
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.44 E-value=3.9e-07 Score=85.27 Aligned_cols=115 Identities=18% Similarity=0.193 Sum_probs=84.9
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hccC--hhhHHHH----HHHHhhC-C-cEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AELL--PQHKEEL----VELLKKD-G-ATA 299 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~~~--P~~K~~~----v~~l~~~-g-~v~ 299 (473)
.++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.. +.++ ++.. ...|... .+.+.-. . .++
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i 188 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVI 188 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Confidence 3578999999999999999999999999999999999999862 1222 2211 1224444 4444444 4 799
Q ss_pred EEcCCcccHHHHHHCCe---eEEeCCCCCcc--ccccccEEEecCCcccHHHHH
Q 038599 300 MVGDGINDAPALAAVDI---GISMGISGSAL--AMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 300 mvGDG~ND~~al~~Adv---gIa~g~~~~~~--a~~~ad~vl~~~~l~~l~~~i 348 (473)
+|||+.||..+++.|++ ++++| .+... .+..+|+++ +++..+.+++
T Consensus 189 ~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~--~~~~el~~~l 239 (240)
T 3sd7_A 189 MVGDRKYDIIGAKKIGIDSIGVLYG-YGSFEEISESEPTYIV--ENVESIKDIL 239 (240)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESSS-SCCHHHHHHHCCSEEE--SSSTTHHHHH
T ss_pred EECCCHHHHHHHHHCCCCEEEEeCC-CCCHHHHhhcCCCEEE--CCHHHHHHHh
Confidence 99999999999999999 66655 33322 246799999 7888888765
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.44 E-value=1.3e-06 Score=81.06 Aligned_cols=108 Identities=12% Similarity=0.065 Sum_probs=73.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehccChhhH------HHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAELLPQHK------EELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~~P~~K------~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+... +..+.+++|+.. +.+ .++..+..| ..+.+.+.-.. .++||
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~v 169 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAI 169 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEE
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEE
Confidence 3689999999999999999999998754 777888999862 111 122222233 44555554444 79999
Q ss_pred cCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHH
Q 038599 302 GDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIP 345 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~ 345 (473)
||+.||..+.+.|++++++. +..+..+ .||+++ +++..+.
T Consensus 170 GDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~--~s~~el~ 209 (233)
T 3nas_A 170 EDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVV--RQTSDLT 209 (233)
T ss_dssp ECSHHHHHHHHHTTCEEEEC-C--------CSEEC--SSGGGCC
T ss_pred eCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEe--CChHhCC
Confidence 99999999999999999997 4444444 899998 4555443
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.43 E-value=4.4e-07 Score=81.40 Aligned_cols=113 Identities=18% Similarity=0.249 Sum_probs=80.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcC--CCcccee------hcc----C--h
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSH---------------AAALYAQDQLD--HAFDMVY------AEL----L--P 282 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~---------------~~a~~~a~~~g--i~~~~v~------a~~----~--P 282 (473)
++.|++.+++++|+++|+++.++|+.+. ..+....+++| +. .++ ++. . |
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~~~~~~KP~~ 104 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVD--AIFMCPHGPDDGCACRKPLP 104 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCC--EEEEECCCTTSCCSSSTTSS
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCcee--EEEEcCCCCCCCCCCCCCCH
Confidence 4688999999999999999999999885 56677788899 55 555 121 1 2
Q ss_pred hhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCe---eEEeCCCCCccc----cccccEEEecCCcccHHHHHH
Q 038599 283 QHKEELVELLKKDG-ATAMVGDGINDAPALAAVDI---GISMGISGSALA----MESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 283 ~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Adv---gIa~g~~~~~~a----~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+-=..+.+.+.-.. .++||||+.||..+.++|++ ++..| .+.... ...+|+++ +++..+.+++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v~--~~l~el~~~l~ 176 (179)
T 3l8h_A 105 GMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRVC--EDLAAVAEQLL 176 (179)
T ss_dssp HHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEEe--cCHHHHHHHHH
Confidence 22233444444333 79999999999999999996 55544 222222 24579998 77888877653
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.43 E-value=6.4e-07 Score=80.68 Aligned_cols=109 Identities=17% Similarity=0.198 Sum_probs=80.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-hccC------hhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-AELL------PQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~~~------P~~K~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.+.++.|++.|+++.++|++...... ..+.+|+... .++ +... |+--..+.+.+.-.. .++++
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~i 163 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYI 163 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEE
Confidence 46899999999999999999999999988888 8888888621 111 1111 222244445554333 79999
Q ss_pred cCCcccHHHHHHCCee-EEeCCCCCccccccccEEEecCCcccHHHHH
Q 038599 302 GDGINDAPALAAVDIG-ISMGISGSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 302 GDG~ND~~al~~Advg-Ia~g~~~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
||+.||.++++.|+++ +.++ ++. . .+|+++ +++..+.+++
T Consensus 164 GD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 164 GDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRI--QALADISRIF 204 (207)
T ss_dssp ESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEEC--SSTTHHHHHT
T ss_pred CCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEe--CCHHHHHHHH
Confidence 9999999999999997 7786 554 2 688887 6777776654
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=1.3e-06 Score=80.96 Aligned_cols=115 Identities=25% Similarity=0.409 Sum_probs=81.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHcCCCccceeh------------------
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDS---------------HAAALYAQDQLDHAFDMVYA------------------ 278 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~---------------~~~a~~~a~~~gi~~~~v~a------------------ 278 (473)
++.|++.+++++|+++|+++.++|+.. ...+..+.+++|+.-+.++.
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~~~~~~~~~~~~~~~~ 129 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDC 129 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSS
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCcCCCCcccccCccCcC
Confidence 678999999999999999999999998 46777888889985323321
Q ss_pred -ccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCee--EEeCCCC---CccccccccEEEecCCcccHHHHHH
Q 038599 279 -ELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIG--ISMGISG---SALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 279 -~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Advg--Ia~g~~~---~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
...|+--..+.+.+.-.. .++||||+.||..+.++|++. +.+. .+ .+.....+|+++ +++..+.+++.
T Consensus 130 ~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~-~g~~~~~~~~~~~d~vi--~~l~el~~~l~ 204 (211)
T 2gmw_A 130 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVR-TGKPITPEAENAADWVL--NSLADLPQAIK 204 (211)
T ss_dssp STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEES-SSSCCCHHHHHHCSEEE--SCGGGHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEe-cCCCccccccCCCCEEe--CCHHHHHHHHH
Confidence 112223333444444333 799999999999999999964 4442 22 222234589988 77888887664
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.39 E-value=2.1e-06 Score=79.36 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=85.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hc----cC--hhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AE----LL--PQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~----~~--P~~K~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.+.++.|++. +++.++|+..........+.+|+.. +.++ ++ .. |+--..+.+.+.-.. .++|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 178 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEEE
Confidence 4678999999999999 9999999999999999999999862 1111 11 11 222334444454333 79999
Q ss_pred cCCc-ccHHHHHHCC---eeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 302 GDGI-NDAPALAAVD---IGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 302 GDG~-ND~~al~~Ad---vgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||+. ||..+.+.|+ +++.+| ...+...+.+|+++ +++..+..+++
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 179 GDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred cCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEee--CCHHHHHHHHH
Confidence 9997 9999999999 567666 55555666899999 78888887765
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=1.9e-06 Score=80.55 Aligned_cols=114 Identities=15% Similarity=0.061 Sum_probs=82.0
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hcc------ChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AEL------LPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~~------~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.. +.++ ++. .|+--..+.+.+.-.. .++|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i 184 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFV 184 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 578999999999999999999999999999999999999862 1121 211 2223333444444333 79999
Q ss_pred cCCcccHHHHHHCCeeEE---eCCCCCccccccc-cEEEecCCcccHHHHH
Q 038599 302 GDGINDAPALAAVDIGIS---MGISGSALAMESG-HVILMSNDIRKIPKAI 348 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa---~g~~~~~~a~~~a-d~vl~~~~l~~l~~~i 348 (473)
||+.||..+.+.|++... .| ...+.....+ |+++ +++..+..++
T Consensus 185 GD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 185 SSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp ESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred eCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceee--CCHHHHHHHH
Confidence 999999999999996543 33 2222233456 8888 7788887765
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.36 E-value=1.7e-06 Score=80.11 Aligned_cols=115 Identities=12% Similarity=0.127 Sum_probs=80.7
Q ss_pred ccCCchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCcc---ceehcc-C--hhhHHHH----HHHHh--hCC-c
Q 038599 232 SCRSGALEAIKDLKSL-GIKSFILAGDSHAAALYAQDQLDHAFD---MVYAEL-L--PQHKEEL----VELLK--KDG-A 297 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~-gi~v~mlTGD~~~~a~~~a~~~gi~~~---~v~a~~-~--P~~K~~~----v~~l~--~~g-~ 297 (473)
.+.|++.+.++.|++. |+++.++|+.....+....+.+|+... .+.+.- . |..+... .+.+. -.. .
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~ 172 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQ 172 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGG
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCccc
Confidence 3679999999999999 999999999999999999999998621 112111 1 2222333 33444 233 7
Q ss_pred EEEEcCCcccHHHHHHCCe---eEEeCCCCCcccc--ccccEEEecCCcccHHHHHH
Q 038599 298 TAMVGDGINDAPALAAVDI---GISMGISGSALAM--ESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 298 v~mvGDG~ND~~al~~Adv---gIa~g~~~~~~a~--~~ad~vl~~~~l~~l~~~i~ 349 (473)
++|+||+.||..+++.|++ ++..| ....... ..+|+++ +++..+..+++
T Consensus 173 ~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~--~~~~el~~~l~ 226 (234)
T 2hcf_A 173 IVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLF--KNFAETDEVLA 226 (234)
T ss_dssp EEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEe--CCHHhHHHHHH
Confidence 9999999999999999995 44444 2222222 2389988 67888887765
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.35 E-value=1.2e-06 Score=80.26 Aligned_cols=103 Identities=13% Similarity=0.024 Sum_probs=74.0
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-hcc----C--hhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-AEL----L--PQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~~----~--P~~K~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.+.++.|++.|+++.++|++ .....+.+++|+... .++ +.. . |+--..+.+.+.-.. .++++
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~i 168 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGL 168 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEE
Confidence 46799999999999999999999988 345667778887521 111 111 1 222333344443333 79999
Q ss_pred cCCcccHHHHHHCCeeEEeCCCCCccccccccEEEec
Q 038599 302 GDGINDAPALAAVDIGISMGISGSALAMESGHVILMS 338 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~ 338 (473)
||+.||..+++.|++++++. ++.+..+ .||+++.+
T Consensus 169 GD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~ 203 (221)
T 2wf7_A 169 EDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPD 203 (221)
T ss_dssp ESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESS
T ss_pred eCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcC
Confidence 99999999999999999997 5555555 89999844
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.34 E-value=1.4e-06 Score=80.90 Aligned_cols=116 Identities=15% Similarity=0.039 Sum_probs=83.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hc------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AE------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+.. +.++ ++ ..|+--..+.+.+.-.. .++|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i 174 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFV 174 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 468999999999999999999999999998999999999852 1121 11 12333334444554333 79999
Q ss_pred cCCcccHHHHHHCCeeEEeCCCC---CccccccccEEEecCCcccHHHHHH
Q 038599 302 GDGINDAPALAAVDIGISMGISG---SALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa~g~~~---~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||+.||..+.+.|+++..+-..+ .+.....+|+++ +++..+..++.
T Consensus 175 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 223 (232)
T 1zrn_A 175 ASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELFE 223 (232)
T ss_dssp ESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC-
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHHH
Confidence 99999999999999988872122 233345688888 67777766543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.34 E-value=1.6e-06 Score=81.25 Aligned_cols=115 Identities=11% Similarity=0.152 Sum_probs=80.0
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc----cceeh-cc------ChhhHHHHHHHHhhCC-cE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF----DMVYA-EL------LPQHKEELVELLKKDG-AT 298 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~----~~v~a-~~------~P~~K~~~v~~l~~~g-~v 298 (473)
..+.|++.+.++.|++.|+++.++|+.....+....+. |+.. +.++. +- .|+--..+.+.+.-.. .+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~ 186 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEA 186 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence 35789999999999999999999999887777766666 7752 11111 11 1222333344443333 79
Q ss_pred EEEcCCcccHHHHHHCCe-eEEeCCCCCccc----cccccEEEecCCcccHHHHHH
Q 038599 299 AMVGDGINDAPALAAVDI-GISMGISGSALA----MESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 299 ~mvGDG~ND~~al~~Adv-gIa~g~~~~~~a----~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+||||+.||..+.+.|++ ++.+. .+.... ...+|+++ +++..+.++++
T Consensus 187 i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 187 VVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp EEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 999999999999999998 44554 443222 23699998 78888877665
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.33 E-value=7e-07 Score=85.98 Aligned_cols=65 Identities=22% Similarity=0.234 Sum_probs=51.7
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+|...++.+.++ | .++++||+.||.++++.|++|++|+ ++.+..++.||+++.+++-.++.++++
T Consensus 191 ~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 191 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 455555544433 2 6999999999999999999999998 787878889999997777777877665
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.32 E-value=2.1e-06 Score=80.19 Aligned_cols=114 Identities=16% Similarity=0.199 Sum_probs=78.5
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcccee-------hcc------ChhhHHHHHHHHhhCC-
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVY-------AEL------LPQHKEELVELLKKDG- 296 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~-------a~~------~P~~K~~~v~~l~~~g- 296 (473)
..+.|++.+.++.|++.|+++.++|+..........+. |+. .+| ++. .|+--..+.+.+.-..
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~--~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 183 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP--GIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPN 183 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST--TTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGG
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH--HhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChh
Confidence 46789999999999999999999999887777777777 776 222 111 1222334444444333
Q ss_pred cEEEEcCCcccHHHHHHCCee-EEeCCCCCccc----cccccEEEecCCcccHHHHHHH
Q 038599 297 ATAMVGDGINDAPALAAVDIG-ISMGISGSALA----MESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~Advg-Ia~g~~~~~~a----~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
.++||||+.||..+.+.|++. +.+. .+.... ...+|+++ +++..+..+++.
T Consensus 184 ~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~--~~~~el~~~l~~ 239 (247)
T 3dv9_A 184 EALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLF--HSMPDFNKNWET 239 (247)
T ss_dssp GEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEE--SSHHHHHHHHHH
T ss_pred heEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEE--CCHHHHHHHHHH
Confidence 799999999999999999974 4443 332222 23799998 778888776653
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.28 E-value=3.1e-06 Score=78.43 Aligned_cols=113 Identities=16% Similarity=0.156 Sum_probs=81.5
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehcc------ChhhHHHHHHHHhhC-C-cEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAEL------LPQHKEELVELLKKD-G-ATA 299 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~------~P~~K~~~v~~l~~~-g-~v~ 299 (473)
-.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+ .++- .|+--..+.+.+.-. . .++
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v 181 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVF 181 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEE
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEE
Confidence 3468999999999999999999999999999999999999862 122 1211 123334455555433 3 699
Q ss_pred EEcCCcccHHHHHHCCe-eEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 300 MVGDGINDAPALAAVDI-GISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 300 mvGDG~ND~~al~~Adv-gIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||||+.||..+.+.|++ +|.++ .+.+ ..++.++ +++..+.+++.
T Consensus 182 ~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 182 FIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp EEESSHHHHHHHHHTTCEEEEEC-C--------CCEEE--SSHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceee--CCHHHHHHHHH
Confidence 99999999999999997 77775 4333 3567777 77888777664
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.27 E-value=1.9e-06 Score=81.52 Aligned_cols=118 Identities=14% Similarity=0.100 Sum_probs=85.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cc-ee-hccCh-hhH------HHHHHHHhhCC-cE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DM-VY-AELLP-QHK------EELVELLKKDG-AT 298 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~-v~-a~~~P-~~K------~~~v~~l~~~g-~v 298 (473)
-.+.|++.+.++.|++.|+++.++|+.....+..+.+++|+.. +. ++ ++..+ ..| ..+.+.+.-.. .+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 188 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERC 188 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHE
Confidence 4567899999999999999999999999999999999999851 12 22 22111 222 33344443333 79
Q ss_pred EEEcCCcccHHHHHHCCee-EEeCCCCC--------ccccccccEEEecCCcccHHHHHHHH
Q 038599 299 AMVGDGINDAPALAAVDIG-ISMGISGS--------ALAMESGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 299 ~mvGDG~ND~~al~~Advg-Ia~g~~~~--------~~a~~~ad~vl~~~~l~~l~~~i~~~ 351 (473)
+||||+.||..+.+.|+++ +.+. .+. +.....+|+++ +++..+.++++..
T Consensus 189 i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~~ 247 (259)
T 4eek_A 189 VVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVL--TSHAELRAALAEA 247 (259)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHHT
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHhc
Confidence 9999999999999999997 4453 331 12234589999 8899988887653
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.27 E-value=1.8e-06 Score=83.07 Aligned_cols=52 Identities=13% Similarity=0.271 Sum_probs=45.8
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 297 ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++-.++.++++
T Consensus 208 ~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 208 EIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp GEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred HeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 5999999999999999999999998 777777888999998777788877664
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=1.4e-06 Score=83.78 Aligned_cols=116 Identities=11% Similarity=0.101 Sum_probs=84.2
Q ss_pred CccCCchHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHcCCCcc--cee-hc------cChhhHHHHHHH----HhhC
Q 038599 231 DSCRSGALEAIKDLKSLGI--KSFILAGDSHAAALYAQDQLDHAFD--MVY-AE------LLPQHKEELVEL----LKKD 295 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi--~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~------~~P~~K~~~v~~----l~~~ 295 (473)
-++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+... .++ ++ ..+..|...++. +.-.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~ 220 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLA 220 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCC
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCCC
Confidence 3567899999999999999 9999999999999999999998621 222 11 112334444443 3332
Q ss_pred --CcEEEEcCCcccHHHHHHCCeeEEeCCCCCc-----cccccccEEEecCCcccHHHHH
Q 038599 296 --GATAMVGDGINDAPALAAVDIGISMGISGSA-----LAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 296 --g~v~mvGDG~ND~~al~~AdvgIa~g~~~~~-----~a~~~ad~vl~~~~l~~l~~~i 348 (473)
..++||||+.||..+.+.|++|.+++..... .....+|+++ +++..+++++
T Consensus 221 ~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 221 RYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp CGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred CcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 2699999999999999999998887633222 1234788998 7888877654
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.4e-05 Score=72.52 Aligned_cols=122 Identities=20% Similarity=0.229 Sum_probs=87.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCc--cceehc-----------cChhhHHHHHHHHhhC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSH---AAALYAQDQLDHAF--DMVYAE-----------LLPQHKEELVELLKKD 295 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~---~~a~~~a~~~gi~~--~~v~a~-----------~~P~~K~~~v~~l~~~ 295 (473)
++.|++.+++++|+++|+++.++|+... ..+..+.+++|+.. +.++.. ..|+--..+++.+.-.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 113 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQID 113 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCC
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCC
Confidence 4789999999999999999999998776 88889999999862 122211 1233334445555444
Q ss_pred C-cEEEEcCC-cccHHHHHHCCeeEE-eCCCCCc-----cc-cccccEEEecCCcccHHHHHHHHHHH
Q 038599 296 G-ATAMVGDG-INDAPALAAVDIGIS-MGISGSA-----LA-MESGHVILMSNDIRKIPKAIKLARKA 354 (473)
Q Consensus 296 g-~v~mvGDG-~ND~~al~~AdvgIa-~g~~~~~-----~a-~~~ad~vl~~~~l~~l~~~i~~~r~~ 354 (473)
. .++||||+ .+|..+.++|++... +. .+.. .. ...+|.++...++..+++++++.++-
T Consensus 114 ~~~~l~VGD~~~~Di~~A~~aG~~~i~v~-~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~~~ 180 (189)
T 3ib6_A 114 KTEAVMVGNTFESDIIGANRAGIHAIWLQ-NPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKKI 180 (189)
T ss_dssp GGGEEEEESBTTTTHHHHHHTTCEEEEEC-CTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHHHH
T ss_pred cccEEEECCCcHHHHHHHHHCCCeEEEEC-CccccccccccccCCCcceeccccHHhHHHHHHHHHHh
Confidence 3 79999999 799999999999533 42 2221 11 12789999555899999999877653
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.25 E-value=8.3e-07 Score=81.13 Aligned_cols=112 Identities=13% Similarity=0.135 Sum_probs=80.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-hccChhhH------HHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-AELLPQHK------EELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~~~P~~K------~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++. +++.++|+.+...+..+.+++|+... .++ ++-....| ..+.+.+.-.. .++|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~v 161 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI 161 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEE
Confidence 4689999999999999 99999999999999999999998521 111 22112234 44445554333 79999
Q ss_pred cCCcccHHHHHHCCeeEEeCC--C-CCccccccccEEEecCCcccHHHH
Q 038599 302 GDGINDAPALAAVDIGISMGI--S-GSALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa~g~--~-~~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
||+.||..+.+.|++++.+.. . ..+..++ +|+++ +++..+..+
T Consensus 162 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~--~~~~el~~~ 207 (209)
T 2hdo_A 162 GDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRF--QKPLDILEL 207 (209)
T ss_dssp ESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEE--SSGGGGGGG
T ss_pred CCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEe--CCHHHHHHh
Confidence 999999999999999988632 1 2333444 89988 667666543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.1e-05 Score=75.57 Aligned_cols=116 Identities=16% Similarity=0.177 Sum_probs=81.6
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehccC----h--hhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAELL----P--QHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~~----P--~~K~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.+.++.|++.|+++.++|+.....+....+++|+.. +.+ .++.. | +--..+.+.+.-.. .++|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~i 173 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMV 173 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 468999999999999999999999999888889999999862 112 22211 2 22233334443333 79999
Q ss_pred cCCc-ccHHHHHHCCeeEEeCCCC--Ccccc---ccccEEEecCCcccHHHHHH
Q 038599 302 GDGI-NDAPALAAVDIGISMGISG--SALAM---ESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 302 GDG~-ND~~al~~AdvgIa~g~~~--~~~a~---~~ad~vl~~~~l~~l~~~i~ 349 (473)
||+. ||..+.+.|+++...-..+ ..... ..+|+++ +++..+..++.
T Consensus 174 GD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 225 (241)
T 2hoq_A 174 GDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVLA 225 (241)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHHH
T ss_pred CCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHHH
Confidence 9998 9999999999975541122 22222 2689888 77888877664
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.2e-06 Score=82.23 Aligned_cols=115 Identities=18% Similarity=0.199 Sum_probs=83.7
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc-cceehc---------------cCh--------hhHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF-DMVYAE---------------LLP--------QHKE 286 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~-~~v~a~---------------~~P--------~~K~ 286 (473)
-+++|++.++++.|+++|+++.++|+.+...+..+.+ |+.. +.+++. ..| .+|.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K~ 153 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKP 153 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHH
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCCCCccccccccCCcHH
Confidence 4679999999999999999999999999988888887 6521 222221 122 2477
Q ss_pred HHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccccc--ccEEEecCCcccHHHHHHH
Q 038599 287 ELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMES--GHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 287 ~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~--ad~vl~~~~l~~l~~~i~~ 350 (473)
.+++.+.... .++||||+.+|..+.+.|++.+... ...+..... +|+++ +++..+..++..
T Consensus 154 ~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 154 SVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp HHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred HHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 8888887665 8999999999999999999988642 111222222 66766 678777776643
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.22 E-value=3.9e-06 Score=77.09 Aligned_cols=113 Identities=12% Similarity=0.034 Sum_probs=80.7
Q ss_pred ccCCchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCc--cceehccChhhHHHHHHHHh----hCC-cEEEEcC
Q 038599 232 SCRSGALEAIKDLKSLG-IKSFILAGDSHAAALYAQDQLDHAF--DMVYAELLPQHKEELVELLK----KDG-ATAMVGD 303 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~g-i~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~~~P~~K~~~v~~l~----~~g-~v~mvGD 303 (473)
.+.|++.+.++.|++.| +++.++|+..........+.+|+.. +.++..- ..|...++.+. -.. .++++||
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~--kpk~~~~~~~~~~lgi~~~~~i~iGD 182 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMS--DKTEKEYLRLLSILQIAPSELLMVGN 182 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEES--CCSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecC--CCCHHHHHHHHHHhCCCcceEEEECC
Confidence 56889999999999999 9999999998888888899999852 1233222 23444444433 223 7999999
Q ss_pred Cc-ccHHHHHHCCeeEEeCC------CCCccccc-cccEEEecCCcccHHHHH
Q 038599 304 GI-NDAPALAAVDIGISMGI------SGSALAME-SGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 304 G~-ND~~al~~AdvgIa~g~------~~~~~a~~-~ad~vl~~~~l~~l~~~i 348 (473)
+. ||..+.+.|+++.++=. .+...... .+|+++ +++..++.++
T Consensus 183 ~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 183 SFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp CCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred CcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 96 99999999999888721 12222233 348888 7888887654
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.22 E-value=7.8e-06 Score=75.61 Aligned_cols=114 Identities=11% Similarity=0.079 Sum_probs=82.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--c-eehccCh--hhHHHHH----HHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--M-VYAELLP--QHKEELV----ELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~-v~a~~~P--~~K~~~v----~~l~~~g-~v~mv 301 (473)
.+.|++.+.++.|+ .|+++.++|+..........+.+|+... . +.++..+ ..|...+ +.+.-.. .+++|
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~i 185 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMI 185 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 46889999999999 9999999999999888999999998621 1 1222111 2223333 3333223 79999
Q ss_pred cCCc-ccHHHHHHCCeeEEeCCCCCc-cccccccEEEecCCcccHHHHH
Q 038599 302 GDGI-NDAPALAAVDIGISMGISGSA-LAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 302 GDG~-ND~~al~~AdvgIa~g~~~~~-~a~~~ad~vl~~~~l~~l~~~i 348 (473)
||+. ||..+.+.|++++++...+.. .....+|+++ +++..+..+.
T Consensus 186 GD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 186 GDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred CCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 9995 999999999999998744432 4556899999 7787776654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.20 E-value=4.3e-06 Score=79.37 Aligned_cols=119 Identities=14% Similarity=0.066 Sum_probs=83.5
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---ccee-hccC------hhhHHHHHHHHhhC--CcE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMVY-AELL------PQHKEELVELLKKD--GAT 298 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v~-a~~~------P~~K~~~v~~l~~~--g~v 298 (473)
..+.|++.+.++.|++.|+++.++|+........+.+.+|+.. +.++ ++.. |+--..+.+.+.-. ..+
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 189 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGC 189 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGE
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccE
Confidence 3568899999999999999999999999988888888877541 1121 2111 22223344444433 259
Q ss_pred EEEcCCcccHHHHHHCCe---eEEeCCC-----------------------CCccc-cccccEEEecCCcccHHHHHHHH
Q 038599 299 AMVGDGINDAPALAAVDI---GISMGIS-----------------------GSALA-MESGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 299 ~mvGDG~ND~~al~~Adv---gIa~g~~-----------------------~~~~a-~~~ad~vl~~~~l~~l~~~i~~~ 351 (473)
+||||+.||..+.+.|++ ++++|.. ..+.. ...+|+++ +++..++.+++.-
T Consensus 190 i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 267 (277)
T 3iru_A 190 IKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVI--DSVADLETVITDV 267 (277)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEE--SSGGGTHHHHHHH
T ss_pred EEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEe--cCHHHHHHHHHHH
Confidence 999999999999999995 5665521 01222 23589999 8899999887643
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.20 E-value=1e-05 Score=74.80 Aligned_cols=115 Identities=10% Similarity=0.093 Sum_probs=84.0
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--c-eehcc------ChhhHHHHHHHHh-hCC-cEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--M-VYAEL------LPQHKEELVELLK-KDG-ATA 299 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~-v~a~~------~P~~K~~~v~~l~-~~g-~v~ 299 (473)
-.+.|++.+.++.|++. +++.++|+.....+....+++|+... . +.++. .|+--..+.+.+. -.. .++
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i 180 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTL 180 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEE
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeE
Confidence 35688999999999999 99999999999988999999998621 1 11211 1222233344443 233 799
Q ss_pred EEcCCc-ccHHHHHHCCee-EEeCCCC--CccccccccEEEecCCcccHHHHHH
Q 038599 300 MVGDGI-NDAPALAAVDIG-ISMGISG--SALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 300 mvGDG~-ND~~al~~Advg-Ia~g~~~--~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||||+. ||..+.+.|+++ +.++ .+ .+..+..+|+++ +++..+.++++
T Consensus 181 ~vGD~~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 181 IIGDSLTADIKGGQLAGLDTCWMN-PDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEEC-TTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred EECCCcHHHHHHHHHCCCEEEEEC-CCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 999998 999999999995 4443 33 445566899999 88999888765
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.19 E-value=9e-06 Score=76.82 Aligned_cols=114 Identities=12% Similarity=0.110 Sum_probs=83.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehcc------ChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAEL------LPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~------~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|+ |+++.++|+.+...+..+.+++|+.. +.+ .++. .|+--..+.+.+.-.. .++|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 170 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFV 170 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 57899999999999 99999999999999999999999862 111 1211 2333334444444333 79999
Q ss_pred cCCcccHHHHHHCCeeEEeCCC-----------------------C---CccccccccEEEecCCcccHHHHHH
Q 038599 302 GDGINDAPALAAVDIGISMGIS-----------------------G---SALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa~g~~-----------------------~---~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||+.||..+.+.|++...+... + .+..+..+|+++ +++..+..++.
T Consensus 171 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 242 (253)
T 1qq5_A 171 SSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV--PALGDLPRLVR 242 (253)
T ss_dssp ESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE--SSGGGHHHHHH
T ss_pred eCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee--CCHHHHHHHHH
Confidence 9999999999999998887523 1 223345689988 78999888764
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.19 E-value=6.9e-06 Score=74.57 Aligned_cols=113 Identities=12% Similarity=0.079 Sum_probs=81.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hc------cChhhHHHHHHHHhhCCcEEEEc
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AE------LLPQHKEELVELLKKDGATAMVG 302 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~------~~P~~K~~~v~~l~~~g~v~mvG 302 (473)
++.|++.+ ++.|++. +++.++|+.+...+..+.+++|+.. +.++ ++ ..|+--..+.+.+. ...++|||
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~vG 150 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG-AKEAFLVS 150 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT-CSCCEEEE
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC-CCcEEEEe
Confidence 56789999 9999999 9999999999988999999999862 1222 11 12333344555555 33899999
Q ss_pred CCcccHHHHHHCCeeEEeCCC---CCccccccccEEEecCCcccHHHHHH
Q 038599 303 DGINDAPALAAVDIGISMGIS---GSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 303 DG~ND~~al~~AdvgIa~g~~---~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|+.||..+.+.|++...+-.. ..+.....+|.++ +++..+..++.
T Consensus 151 D~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 198 (201)
T 2w43_A 151 SNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWIL 198 (201)
T ss_dssp SCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHHH
T ss_pred CCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHHH
Confidence 999999999999998766112 2222344688888 67777766553
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.18 E-value=7.8e-06 Score=76.63 Aligned_cols=115 Identities=16% Similarity=0.127 Sum_probs=84.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-c--ChhhHHHHHH----HHhhCC-cEEEEcC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-L--LPQHKEELVE----LLKKDG-ATAMVGD 303 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-~--~P~~K~~~v~----~l~~~g-~v~mvGD 303 (473)
.+.|++.+.++.|++. +++.++|+........+.+.+|+..+.++.. . ....|...++ .+.-.. .++||||
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD 198 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPWDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAA 198 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCCSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCcceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcC
Confidence 4578999999999985 9999999999988899999999853333221 1 1122334443 343333 7999999
Q ss_pred CcccHHHHHHCCeeEEeCC----CCC---cc--ccccccEEEecCCcccHHHHHH
Q 038599 304 GINDAPALAAVDIGISMGI----SGS---AL--AMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 304 G~ND~~al~~AdvgIa~g~----~~~---~~--a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+.||..+.+.|++++++.. .+. +. .+..+|+++ +++..+..++.
T Consensus 199 ~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 199 HNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp CHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred chHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 9999999999999999873 222 22 256789999 78888887764
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.2e-05 Score=75.02 Aligned_cols=116 Identities=11% Similarity=0.116 Sum_probs=84.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceeh-cc--ChhhHHHHHHHH-hhCC----cEEEEcC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA-EL--LPQHKEELVELL-KKDG----ATAMVGD 303 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a-~~--~P~~K~~~v~~l-~~~g----~v~mvGD 303 (473)
++.|++.+.++.|++. +++.++|+........+.+.+|+.-+.+++ +. ....|...++.+ +..| .++||||
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD 194 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAA 194 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEES
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCeeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeC
Confidence 5678999999999997 999999999999999999999985333222 11 111223344433 2223 7999999
Q ss_pred CcccHHHHHHCCeeEEeCC----CCC----cc-ccccccEEEecCCcccHHHHHHH
Q 038599 304 GINDAPALAAVDIGISMGI----SGS----AL-AMESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 304 G~ND~~al~~AdvgIa~g~----~~~----~~-a~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
+.||..+.+.|++++++.. .+. +. ....+|+++ +++..+..++..
T Consensus 195 ~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 195 HNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp CHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred ChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 9999999999999999863 121 11 356789999 889888887754
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.3e-05 Score=73.97 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=82.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-------cChhhHHHHHHHHhhCC----cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-------LLPQHKEELVELLKKDG----ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-------~~P~~K~~~v~~l~~~g----~v~m 300 (473)
.+.|++.+.++.|++ |+++.++|+..........+.++-.-+.++.. ..|+-....++.++..| .++|
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~ 177 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILH 177 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhEEE
Confidence 578999999999999 89999999999888887777766432233221 23333334533333333 7999
Q ss_pred EcCCc-ccHHHHHHCCeeEEeCCCC----------CccccccccEEEecCCcccHHHHHH
Q 038599 301 VGDGI-NDAPALAAVDIGISMGISG----------SALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 301 vGDG~-ND~~al~~AdvgIa~g~~~----------~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|||+. ||..+.++|+++.++...+ .+.....+|+++ +++..+..++.
T Consensus 178 vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l~ 235 (240)
T 3smv_A 178 TAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAHK 235 (240)
T ss_dssp EESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHHH
T ss_pred ECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHHH
Confidence 99996 9999999999999984221 234457899999 77888877665
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.13 E-value=4.5e-06 Score=79.42 Aligned_cols=55 Identities=16% Similarity=0.229 Sum_probs=44.1
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
+.+++-.||+++ .+..-+.+.++|++|+++|++++++||.+...+..+.+++|+.
T Consensus 3 kli~~DlDGTLl-----~~~~~~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 3 RLIFLDIDKTLI-----PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp EEEEECCSTTTC-----TTSCSGGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred cEEEEeCCCCcc-----CCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 456666788887 3333345999999999999999999999999998888888763
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.11 E-value=7.6e-06 Score=74.07 Aligned_cols=86 Identities=15% Similarity=0.102 Sum_probs=67.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCccceehc--cChhhHHHHHHH----HhhCC-cEEEEcC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDS-HAAALYAQDQLDHAFDMVYAE--LLPQHKEELVEL----LKKDG-ATAMVGD 303 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~-~~~a~~~a~~~gi~~~~v~a~--~~P~~K~~~v~~----l~~~g-~v~mvGD 303 (473)
++.|++.+++++|++.|+++.++||.+ ...+..+.+++|+. .+|.. ..+.+|...++. +.-.. .++||||
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD 145 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF--RYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDD 145 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT--TTEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEES
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH--hhcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeC
Confidence 578999999999999999999999998 78899999999997 44433 233455444443 32222 6999999
Q ss_pred CcccHHHHHHCCeeEE
Q 038599 304 GINDAPALAAVDIGIS 319 (473)
Q Consensus 304 G~ND~~al~~AdvgIa 319 (473)
+.+|..+.++|++...
T Consensus 146 ~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 146 ERRNIVDVSKLGVTCI 161 (187)
T ss_dssp CHHHHHHHHTTTCEEE
T ss_pred CccChHHHHHcCCEEE
Confidence 9999999999998543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.11 E-value=1.6e-06 Score=84.16 Aligned_cols=116 Identities=17% Similarity=0.177 Sum_probs=83.9
Q ss_pred cCCchHHHHHHHHhC-CCeEEEEcCC---------------------CHHHHHHHHHHcCCCccc-------------ee
Q 038599 233 CRSGALEAIKDLKSL-GIKSFILAGD---------------------SHAAALYAQDQLDHAFDM-------------VY 277 (473)
Q Consensus 233 lr~~a~~~I~~L~~~-gi~v~mlTGD---------------------~~~~a~~~a~~~gi~~~~-------------v~ 277 (473)
.++++.++++.+++. |+++.+.|.. ....+..+.++.|+.... ++
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 202 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYD 202 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEE
T ss_pred CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCceE
Confidence 456778888888877 8877777755 345556666677764111 22
Q ss_pred hccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 278 AELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 278 a~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.+..| ..|...++.+.++ | .++|+||+.||.++++.|+++++++ ++.+..++.||+++.+++-.++.++++
T Consensus 203 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 203 VDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITDSEYSKGITNTLK 280 (289)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCSSCHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcCCCCcCHHHHHHH
Confidence 33333 3677777766544 2 6999999999999999999999998 788888889999987766666766654
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.09 E-value=1.2e-05 Score=76.72 Aligned_cols=116 Identities=17% Similarity=0.180 Sum_probs=84.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-h------ccChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-A------ELLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a------~~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+... .++ + ...|+--..+.+.+.-.. .++||
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~v 184 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHV 184 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 36799999999999999999999987664 5788889998521 111 1 122344444555554444 79999
Q ss_pred cCCc-ccHHHHHHCCeeEEeCCCCCccc-----cccccEEEecCCcccHHHHHHH
Q 038599 302 GDGI-NDAPALAAVDIGISMGISGSALA-----MESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 302 GDG~-ND~~al~~AdvgIa~g~~~~~~a-----~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
||+. ||..+.++|+++..+...+.... ...+|+++ +++..+..++..
T Consensus 185 GD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~~ 237 (263)
T 3k1z_A 185 GDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALDC 237 (263)
T ss_dssp ESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHHH
T ss_pred CCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHHH
Confidence 9997 99999999999998863443221 12689998 889999988764
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.08 E-value=4.4e-06 Score=76.78 Aligned_cols=112 Identities=16% Similarity=0.205 Sum_probs=80.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hccChhhHHHHHHHH-hhCC----cEEEEcC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AELLPQHKEELVELL-KKDG----ATAMVGD 303 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~~~P~~K~~~v~~l-~~~g----~v~mvGD 303 (473)
++.|++.+.++.|++ |+++.++|+.+...+..+.+++|+.. +.++ ++-.+..|..+++.+ ++.| .++||||
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgD 162 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGD 162 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECC
Confidence 467999999999999 99999999998888888889999862 1222 221223455555543 3333 6999999
Q ss_pred CcccHHHHHHCCe---eEEeCCCC-Ccccc-ccccEEEecCCcccHHHH
Q 038599 304 GINDAPALAAVDI---GISMGISG-SALAM-ESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 304 G~ND~~al~~Adv---gIa~g~~~-~~~a~-~~ad~vl~~~~l~~l~~~ 347 (473)
+.||..+.++|++ ++.+| .+ .+..+ ..+|+++ +++..+..+
T Consensus 163 s~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~--~~~~el~~~ 208 (210)
T 2ah5_A 163 TKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp SHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred CHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence 9999999999999 56555 33 22222 3589888 667776654
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.08 E-value=8e-06 Score=78.87 Aligned_cols=58 Identities=16% Similarity=0.123 Sum_probs=47.3
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
.+.+++-.||+++. -.+.+.+.+.++|++|+++|++++++||.+...+..+.+++|+.
T Consensus 9 ~~li~~DlDGTLl~---~~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 9 PLLVFSDLDGTLLD---SHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CEEEEEECTTTTSC---SSCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred ceEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 46677778888863 12345578899999999999999999999999999998888764
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.08 E-value=1.5e-05 Score=73.35 Aligned_cols=112 Identities=13% Similarity=0.181 Sum_probs=77.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---ccee-hcc--Ch--hhHHHHH----HHHhhCC-cE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMVY-AEL--LP--QHKEELV----ELLKKDG-AT 298 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v~-a~~--~P--~~K~~~v----~~l~~~g-~v 298 (473)
.+.+++.+.++.|+. ++.++|+........+.+++|+.. +.++ ++. .. ..|...+ +.+.-.. .+
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~ 163 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV 163 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHe
Confidence 457888888887764 899999999988889999999862 1121 111 11 2233333 3343333 79
Q ss_pred EEEcCCcccHHHHHHCCee-EEeCCCCCc-------ccccc-ccEEEecCCcccHHHHHH
Q 038599 299 AMVGDGINDAPALAAVDIG-ISMGISGSA-------LAMES-GHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 299 ~mvGDG~ND~~al~~Advg-Ia~g~~~~~-------~a~~~-ad~vl~~~~l~~l~~~i~ 349 (473)
+++||+.||..+++.|+++ +.++ .+.. ..++. +|+++ +++..+..+++
T Consensus 164 i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 220 (229)
T 2fdr_A 164 VVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 220 (229)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceee--cCHHHHHHHHH
Confidence 9999999999999999997 6675 4433 24444 89998 77888877653
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.06 E-value=7.1e-06 Score=76.98 Aligned_cols=114 Identities=19% Similarity=0.288 Sum_probs=78.0
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC-ccceeh-ccC--hhhHHH----HHHHHhhCC-cEEEEc
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA-FDMVYA-ELL--PQHKEE----LVELLKKDG-ATAMVG 302 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~-~~~v~a-~~~--P~~K~~----~v~~l~~~g-~v~mvG 302 (473)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+. -+.+++ +.. +..|.. +.+.+.-.. .++|||
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vG 189 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIG 189 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTTTCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCcceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEc
Confidence 35789999999999999999999999888888888888874 122322 111 222333 333443333 799999
Q ss_pred CCcccHHHHHHCCee---EEeCCCCC-ccc-cccccEEEecCCcccHHHHH
Q 038599 303 DGINDAPALAAVDIG---ISMGISGS-ALA-MESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 303 DG~ND~~al~~Advg---Ia~g~~~~-~~a-~~~ad~vl~~~~l~~l~~~i 348 (473)
|+.||..+.++|++. +.+| .+. +.. ...+|.++ +++..+...+
T Consensus 190 Ds~~Di~~a~~aG~~~v~v~~~-~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 190 DSEIDIQTARNSEMDEIAVNWG-FRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp SSHHHHHHHHHTTCEEEEESSS-SSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred CCHHHHHHHHHCCCeEEEECCC-CCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 999999999999994 3333 222 222 23588888 6677766544
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.01 E-value=6.1e-06 Score=77.59 Aligned_cols=113 Identities=15% Similarity=0.131 Sum_probs=75.6
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCc---cceehc--cC------hhhHHHHHHHHhhC---
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ-LDHAF---DMVYAE--LL------PQHKEELVELLKKD--- 295 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~-~gi~~---~~v~a~--~~------P~~K~~~v~~l~~~--- 295 (473)
-.+.|++.+.++.|++.|+++.++|+...........+ .|+.. ..+.++ .. |+--..+.+.+.-.
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 190 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAM 190 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCG
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCc
Confidence 35789999999999999999999999987665543322 34321 122222 11 22223333333322
Q ss_pred CcEEEEcCCcccHHHHHHCCe---eEEeCCCCCccccccccEEEecCCcccHHH
Q 038599 296 GATAMVGDGINDAPALAAVDI---GISMGISGSALAMESGHVILMSNDIRKIPK 346 (473)
Q Consensus 296 g~v~mvGDG~ND~~al~~Adv---gIa~g~~~~~~a~~~ad~vl~~~~l~~l~~ 346 (473)
..++||||+.||..+.+.|++ ++.+| .+.+..+..+|+++ +++..+..
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~--~sl~el~~ 241 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVL--NSLQDFQP 241 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEEC--SCGGGCCG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEee--cCHHHhhH
Confidence 368999999999999999994 55555 44556778899998 67776644
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.94 E-value=2.1e-05 Score=75.54 Aligned_cols=105 Identities=16% Similarity=0.011 Sum_probs=74.9
Q ss_pred ccCCchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCc-ccee-hcc------ChhhHHHHHHHHhh-------C
Q 038599 232 SCRSGALEAIKDLKSL-GIKSFILAGDSHAAALYAQDQLDHAF-DMVY-AEL------LPQHKEELVELLKK-------D 295 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~-gi~v~mlTGD~~~~a~~~a~~~gi~~-~~v~-a~~------~P~~K~~~v~~l~~-------~ 295 (473)
.+.|++.+.++.|++. |+++.++|+.....+....+.+|+.. +.+. ++- .|+--..+.+.+.- .
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~~ 193 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPS 193 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSCGG
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCccCEEEEcccCCCCCCChHHHHHHHHHcCCCccccCCC
Confidence 3578999999999999 99999999999988888888888752 1122 221 23333444555554 3
Q ss_pred C-cEEEEcCCcccHHHHHHCCeeEEe---CCCCCccccccccEEE
Q 038599 296 G-ATAMVGDGINDAPALAAVDIGISM---GISGSALAMESGHVIL 336 (473)
Q Consensus 296 g-~v~mvGDG~ND~~al~~AdvgIa~---g~~~~~~a~~~ad~vl 336 (473)
. .++++||+.||..+++.|++++.+ +....+.....||+++
T Consensus 194 ~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~ 238 (275)
T 2qlt_A 194 KSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIV 238 (275)
T ss_dssp GSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEE
T ss_pred cceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE
Confidence 3 799999999999999999977665 3122222333588887
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.93 E-value=5.5e-06 Score=76.94 Aligned_cols=88 Identities=20% Similarity=0.178 Sum_probs=64.0
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCcccee-hc------------cC-
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSH---------------AAALYAQDQLDHAFDMVY-AE------------LL- 281 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~---------------~~a~~~a~~~gi~~~~v~-a~------------~~- 281 (473)
.++.|++.+++++|+++|+++.++|+... .......+++|+..+.++ .. ..
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~~ 134 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHP 134 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCT
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCCCCceeecccCCc
Confidence 46789999999999999999999999887 677888899997433332 21 11
Q ss_pred -hhhHHHHH----HHHhhCC-cEEEEcCCcccHHHHHHCCeeE
Q 038599 282 -PQHKEELV----ELLKKDG-ATAMVGDGINDAPALAAVDIGI 318 (473)
Q Consensus 282 -P~~K~~~v----~~l~~~g-~v~mvGDG~ND~~al~~AdvgI 318 (473)
...|..++ +.+.-.. .++||||+.||..+.+.|++..
T Consensus 135 ~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 135 MRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp TSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred cCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 11222333 3333222 6999999999999999999854
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.93 E-value=9.3e-05 Score=69.44 Aligned_cols=115 Identities=12% Similarity=0.090 Sum_probs=82.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehcc--ChhhHHHHHHHHhhCC-cEEEEcCCc-
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAEL--LPQHKEELVELLKKDG-ATAMVGDGI- 305 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~~--~P~~K~~~v~~l~~~g-~v~mvGDG~- 305 (473)
.+.|++.+.++.|+ .|+++.++|+..........+.+|+.. +.++..- .|+--..+.+.+.-.. .+++|||+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~ 190 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLR 190 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCC
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeeeCCCCHHHHHHHHHHhCcCchhEEEECCCch
Confidence 46799999999999 999999999999888888888888852 2333322 2333344445554333 799999999
Q ss_pred ccHHHHHHCCeeEEeCCCCCc--------cccccccE-EEecCCcccHHHHHH
Q 038599 306 NDAPALAAVDIGISMGISGSA--------LAMESGHV-ILMSNDIRKIPKAIK 349 (473)
Q Consensus 306 ND~~al~~AdvgIa~g~~~~~--------~a~~~ad~-vl~~~~l~~l~~~i~ 349 (473)
||..+.+.|++++.+=..+.. .....+|+ ++ +++..+..+++
T Consensus 191 ~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 191 SDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp CCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred hhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 999999999998776323321 11245787 77 77888887765
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.92 E-value=6.2e-05 Score=68.88 Aligned_cols=115 Identities=19% Similarity=0.191 Sum_probs=77.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---ceehc------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---MVYAE------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---~v~a~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+..- .+.++ ..|+-=....+.+.-.. .++||
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~V 163 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVF 163 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEEE
Confidence 4578999999999999999999999999999999999998721 11111 12333334445554443 79999
Q ss_pred cCCcccHHHHHHCCee----EEeCCCCCcccccc-ccEEEecCCcccHHHHHH
Q 038599 302 GDGINDAPALAAVDIG----ISMGISGSALAMES-GHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 302 GDG~ND~~al~~Advg----Ia~g~~~~~~a~~~-ad~vl~~~~l~~l~~~i~ 349 (473)
||..+|..+-++|++. +.-|....+...++ ++.+. ++..+.+.++
T Consensus 164 gDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~---~~~eli~~l~ 213 (216)
T 3kbb_A 164 EDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV---KPEEILNVLK 213 (216)
T ss_dssp ECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE---CGGGHHHHHH
T ss_pred ecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC---CHHHHHHHHH
Confidence 9999999999999984 22332223333344 44443 3455555543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.90 E-value=3.1e-05 Score=69.17 Aligned_cols=87 Identities=17% Similarity=0.158 Sum_probs=63.7
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-hcc------ChhhHHHHHHHHhhCCcEEEEcC
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-AEL------LPQHKEELVELLKKDGATAMVGD 303 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~~------~P~~K~~~v~~l~~~g~v~mvGD 303 (473)
+.|++.+.++.|++.|+++.++|+... .+....+++|+... .++ ++- .|+--..+.+.+.-. .++++||
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~~iGD 160 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS-SGLVIGD 160 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS-SEEEEES
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC-eEEEEcC
Confidence 679999999999999999999998875 56777888888621 111 111 122223333333333 7999999
Q ss_pred CcccHHHHHHCCeeEEeC
Q 038599 304 GINDAPALAAVDIGISMG 321 (473)
Q Consensus 304 G~ND~~al~~AdvgIa~g 321 (473)
+.||..+++.|++++.+-
T Consensus 161 ~~~Di~~a~~aG~~~~~~ 178 (190)
T 2fi1_A 161 RPIDIEAGQAAGLDTHLF 178 (190)
T ss_dssp SHHHHHHHHHTTCEEEEC
T ss_pred CHHHHHHHHHcCCeEEEE
Confidence 999999999999988874
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.89 E-value=4.4e-05 Score=72.70 Aligned_cols=57 Identities=19% Similarity=0.143 Sum_probs=44.3
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG---DSHAAALYAQDQLDHA 272 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTG---D~~~~a~~~a~~~gi~ 272 (473)
++.+++-.||+++- .+.+-|+++++|++++++|++++++|| .+........+++|+.
T Consensus 8 ~kli~~DlDGTLl~----~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 8 KKGYIIDIDGVIGK----SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp CSEEEEECBTTTEE----TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEcCcCcEEC----CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 46677788888764 555678899999999999999999999 5666555556666664
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.88 E-value=5.1e-06 Score=70.37 Aligned_cols=101 Identities=13% Similarity=0.056 Sum_probs=70.3
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-------ccChh
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-------ELLPQ 283 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-------~~~P~ 283 (473)
+.+.+-.|+++ .-..++.|++.+++++|++.|+++.++|+.+...+..+.+++|+.. +.++. ...|+
T Consensus 3 k~i~~D~DgtL----~~~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~ 78 (137)
T 2pr7_A 3 RGLIVDYAGVL----DGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEA 78 (137)
T ss_dssp CEEEECSTTTT----SSCHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHH
T ss_pred cEEEEecccee----cCCCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHH
Confidence 44555666665 1123467889999999999999999999998888788888887752 12221 11233
Q ss_pred hHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCee
Q 038599 284 HKEELVELLKKDG-ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 284 ~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Advg 317 (473)
--..+.+.+.-.. .+.||||+.+|..+.+++++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 3333444443333 799999999999999999873
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00021 Score=68.10 Aligned_cols=115 Identities=14% Similarity=0.181 Sum_probs=81.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cc-eehcc------ChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DM-VYAEL------LPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~-v~a~~------~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.++++.|++ ++++.++|+.+...+..+.+.+|+.. +. +.+.- .|+--..+.+.+.-.. .++||
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v 199 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV 199 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence 567999999999998 59999999999998889999999862 11 12221 2333333444444333 79999
Q ss_pred cCC-cccHHHHHHCCe--eEEeCCCCC--ccccccccEEEecCCcccHHHHHH
Q 038599 302 GDG-INDAPALAAVDI--GISMGISGS--ALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 302 GDG-~ND~~al~~Adv--gIa~g~~~~--~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||. .||..+.++|++ .|.++.... +.....+|+++ +++..+..++.
T Consensus 200 GDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 250 (260)
T 2gfh_A 200 GDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 250 (260)
T ss_dssp ESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred CCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHHH
Confidence 995 999999999999 577752222 12334688888 77888877653
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00033 Score=63.98 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=76.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceeh-c------cChhhHHHHHHHHhhC--CcEEEEc
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA-E------LLPQHKEELVELLKKD--GATAMVG 302 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a-~------~~P~~K~~~v~~l~~~--g~v~mvG 302 (473)
.+.|++.++++.|+++|+++.++||.....+..+.+ ..++ .+++ + ..|+-=....+.+.-. ..++|||
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-~~~d--~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VG 112 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-PVND--WMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLIS 112 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-TTTT--TCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEE
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-ccCC--EEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEe
Confidence 567999999999999999999999999887766554 2222 3332 1 1233223344444432 2689999
Q ss_pred CCcccHHHHHHCCe-eEEeCCCCCc---------------------------cccccccEEEecCCcccHHHHHH
Q 038599 303 DGINDAPALAAVDI-GISMGISGSA---------------------------LAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 303 DG~ND~~al~~Adv-gIa~g~~~~~---------------------------~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|..+|..+-++|++ .|.+. .+.. .....+|+++ +++..+..++.
T Consensus 113 Ds~~Di~aA~~aG~~~i~v~-~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi--~~~~eL~~~l~ 184 (196)
T 2oda_A 113 GDPRLLQSGLNAGLWTIGLA-SCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVI--DHLGELESCLA 184 (196)
T ss_dssp SCHHHHHHHHHHTCEEEEES-SSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEc-cCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEe--CCHHHHHHHHH
Confidence 99999999999997 45543 2211 0123588988 78999887764
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00019 Score=65.83 Aligned_cols=109 Identities=14% Similarity=0.086 Sum_probs=75.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hc------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AE------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.+.++.|++. +++.++|+.+.. .+.+|+.. +.++ +. ..|+--..+.+.+.-.. .++||
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 178 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHV 178 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEE
Confidence 4678999999999998 999999977654 45677651 1111 11 12222334444444333 79999
Q ss_pred cCCc-ccHHHHHHCCeeEEeCCC---CCccccccccEEEecCCcccHHHHHH
Q 038599 302 GDGI-NDAPALAAVDIGISMGIS---GSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 302 GDG~-ND~~al~~AdvgIa~g~~---~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||+. ||..+.+.|+++..+-.. ..+. ...+|+++ +++..+..+++
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 179 GDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred eCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 9998 999999999998776212 2222 56789999 88999988764
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.70 E-value=8.1e-05 Score=67.12 Aligned_cols=89 Identities=16% Similarity=0.134 Sum_probs=67.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-h------ccChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-A------ELLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a------~~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.+.++.|++.| ++.++|+.+......+.+++|+.. +.++ + ...|+--..+.+.+.-.. .++|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 164 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMV 164 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEe
Confidence 36799999999999999 999999999998999999999752 1222 1 112333334445554333 79999
Q ss_pred cCCcccHHHHHHCCeeEEeC
Q 038599 302 GDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa~g 321 (473)
||+.||..+.+.|++...+-
T Consensus 165 gD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 165 DDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp ESCHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHHCCCEEEEE
Confidence 99999999999999987763
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00011 Score=69.99 Aligned_cols=57 Identities=14% Similarity=0.086 Sum_probs=43.2
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG---DSHAAALYAQDQLDHA 272 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTG---D~~~~a~~~a~~~gi~ 272 (473)
++.+++-.||+++- .+.+-|+++++|++++++|++++++|| ..........+++|+.
T Consensus 6 ~kli~~DlDGTLl~----~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 6 YKGYLIDLDGTMYN----GTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp CSEEEEECSSSTTC----HHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCcCceEe----CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45677778888642 245567899999999999999999988 5666666666667764
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.66 E-value=6.6e-05 Score=68.23 Aligned_cols=89 Identities=15% Similarity=0.109 Sum_probs=66.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------cCCCc--cceeh-c------cChhhHHHHHHHHhhCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ------LDHAF--DMVYA-E------LLPQHKEELVELLKKDG 296 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~------~gi~~--~~v~a-~------~~P~~K~~~v~~l~~~g 296 (473)
.+.|++.+.++.|++ |+++.++|+........+.++ .|+.. +.++. . ..|+--..+.+.+.-..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 167 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKP 167 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCCG
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCCh
Confidence 467899999999999 999999999988888888877 67652 12221 1 12333334444454333
Q ss_pred -cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 297 -ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
.++|+||+.||..+.+.|+++..+.
T Consensus 168 ~~~~~igD~~~Di~~a~~aG~~~~~~ 193 (211)
T 2i6x_A 168 EETLFIDDGPANVATAERLGFHTYCP 193 (211)
T ss_dssp GGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred HHeEEeCCCHHHHHHHHHcCCEEEEE
Confidence 7999999999999999999998885
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.63 E-value=4.1e-05 Score=72.27 Aligned_cols=60 Identities=23% Similarity=0.382 Sum_probs=49.8
Q ss_pred hHHHHHHHHhhC-CcEEEEcCCcccHHHHHHC--CeeEEeCCCCCccccccccEEEec-CCcccHHHHHH
Q 038599 284 HKEELVELLKKD-GATAMVGDGINDAPALAAV--DIGISMGISGSALAMESGHVILMS-NDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g~v~mvGDG~ND~~al~~A--dvgIa~g~~~~~~a~~~ad~vl~~-~~l~~l~~~i~ 349 (473)
+|...++.|.++ | |+++||+.||.+||+.| ++||+|| ++ ++.||+++.+ ++-.++.++++
T Consensus 160 ~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 160 NKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp CHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHH
Confidence 899999998876 6 99999999999999999 9999998 55 5778998855 44556665554
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00016 Score=73.24 Aligned_cols=115 Identities=14% Similarity=0.132 Sum_probs=80.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc----ceeh-c---------------cChhhH--HHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD----MVYA-E---------------LLPQHK--EELV 289 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~----~v~a-~---------------~~P~~K--~~~v 289 (473)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+..- .+++ + ..|... ....
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a~ 294 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL 294 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHHH
Confidence 5788999999999999999999999999999999999998621 1221 1 122211 2222
Q ss_pred HHHh--------------hCC-cEEEEcCCcccHHHHHHCCee-EEeCCCCC-------ccccccccEEEecCCcccHHH
Q 038599 290 ELLK--------------KDG-ATAMVGDGINDAPALAAVDIG-ISMGISGS-------ALAMESGHVILMSNDIRKIPK 346 (473)
Q Consensus 290 ~~l~--------------~~g-~v~mvGDG~ND~~al~~Advg-Ia~g~~~~-------~~a~~~ad~vl~~~~l~~l~~ 346 (473)
+.+. -.. .++||||+.+|..+.++|++. |.+. .+. +.....+|.++ +++..+..
T Consensus 295 ~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi--~sl~eL~~ 371 (384)
T 1qyi_A 295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVI--NHLGELRG 371 (384)
T ss_dssp HCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEE--SSGGGHHH
T ss_pred HHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEE--CCHHHHHH
Confidence 3332 122 799999999999999999984 4443 221 11123689998 78988887
Q ss_pred HHH
Q 038599 347 AIK 349 (473)
Q Consensus 347 ~i~ 349 (473)
+++
T Consensus 372 ~l~ 374 (384)
T 1qyi_A 372 VLD 374 (384)
T ss_dssp HHS
T ss_pred HHH
Confidence 764
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.52 E-value=7.8e-05 Score=72.95 Aligned_cols=65 Identities=20% Similarity=0.248 Sum_probs=56.4
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEe-cCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILM-SNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~-~~~l~~l~~~i~ 349 (473)
+|...++.+.+. | .++++||+.||.+|++.|++|++|+ ++.+..++.||+++. +++-.++.++++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 799999887654 3 6999999999999999999999998 777778889999998 777888887765
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.50 E-value=8.1e-05 Score=72.02 Aligned_cols=65 Identities=28% Similarity=0.424 Sum_probs=55.5
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+|...++.+.+. | .++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+.+-.++..+++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHH
Confidence 788888877654 2 6999999999999999999999998 778888888999998777778887765
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00037 Score=64.39 Aligned_cols=89 Identities=11% Similarity=0.103 Sum_probs=65.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH------HHcCCCc--ccee-h------ccChhhHHHHHHHHhhCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ------DQLDHAF--DMVY-A------ELLPQHKEELVELLKKDG 296 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a------~~~gi~~--~~v~-a------~~~P~~K~~~v~~l~~~g 296 (473)
++.|++.+.++.|++. +++.++|+.+......+. +..|+.. +.++ + ...|+--..+.+.+.-..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 3568999999999998 999999999988887666 5556541 1221 1 112333345555554444
Q ss_pred -cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 297 -ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
.++||||+.||..+.++|+++..+.
T Consensus 191 ~~~~~vGD~~~Di~~a~~aG~~~i~v 216 (229)
T 4dcc_A 191 KETFFIDDSEINCKVAQELGISTYTP 216 (229)
T ss_dssp GGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred HHeEEECCCHHHHHHHHHcCCEEEEE
Confidence 7999999999999999999998876
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=9.8e-05 Score=69.81 Aligned_cols=65 Identities=20% Similarity=0.219 Sum_probs=53.0
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccccc-------ccEEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMES-------GHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~-------ad~vl~~~~l~~l~~~i~ 349 (473)
+|...++.+.++ | .++++||+.||.++++.|++|++|| ++.+..++. +|+++.+++-.++.++++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 688888877654 2 6999999999999999999999998 777777775 789887776667776654
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.33 E-value=5.7e-05 Score=68.32 Aligned_cols=90 Identities=10% Similarity=0.161 Sum_probs=62.0
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCc--cceeh-------ccChhhHHHHHHHHhhCC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ-LDHAF--DMVYA-------ELLPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~-~gi~~--~~v~a-------~~~P~~K~~~v~~l~~~g-~v~m 300 (473)
.+.|++.+.++.|++.|+++.++|+.+......+.++ .|+.. +.++. ...|+--..+++.+.-.. .++|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 170 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 170 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 4678999999999999999999998765554333333 34321 12221 112333444555555444 7999
Q ss_pred EcCCcccHHHHHHCCeeEEeC
Q 038599 301 VGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 301 vGDG~ND~~al~~AdvgIa~g 321 (473)
+||+.||..+.+.|++...+.
T Consensus 171 vgD~~~Di~~a~~aG~~~~~~ 191 (206)
T 2b0c_A 171 FDDNADNIEGANQLGITSILV 191 (206)
T ss_dssp EESCHHHHHHHHTTTCEEEEC
T ss_pred eCCCHHHHHHHHHcCCeEEEe
Confidence 999999999999999987764
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00019 Score=68.72 Aligned_cols=81 Identities=19% Similarity=0.217 Sum_probs=65.5
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCc-c--ceehccChhhHHHHHHHHhhCC--cEEE
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSH----AAALYAQDQLDHAF-D--MVYAELLPQHKEELVELLKKDG--ATAM 300 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~----~~a~~~a~~~gi~~-~--~v~a~~~P~~K~~~v~~l~~~g--~v~m 300 (473)
..++.|++.+.++.|++.|++++++||.+. ..+....+++||+. + .++-+-.-..|....+.+.+.| .|++
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~Gy~iv~~ 178 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLY 178 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHTTEEEEEE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCCCChHHHHHHHHhcCCCEEEE
Confidence 356789999999999999999999998854 57778888999984 2 3443433467888888888887 7999
Q ss_pred EcCCcccHHH
Q 038599 301 VGDGINDAPA 310 (473)
Q Consensus 301 vGDG~ND~~a 310 (473)
+||..+|.++
T Consensus 179 vGD~~~Dl~~ 188 (262)
T 3ocu_A 179 VGDNLDDFGN 188 (262)
T ss_dssp EESSGGGGCS
T ss_pred ECCChHHhcc
Confidence 9999999664
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.001 Score=63.24 Aligned_cols=57 Identities=11% Similarity=0.032 Sum_probs=43.9
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILA---GDSHAAALYAQDQLDHA 272 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlT---GD~~~~a~~~a~~~gi~ 272 (473)
++.+.+-.||+++- -...+ |+++++|++++++|++++++| |..........+++|+.
T Consensus 5 ~kli~~DlDGTLl~---~~~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 5 YKGYLIDLDGTIYK---GKSRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp CCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred CCEEEEeCCCceEe---CCEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 35566667787643 23345 899999999999999999999 77777777777777774
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00023 Score=67.63 Aligned_cols=66 Identities=27% Similarity=0.388 Sum_probs=52.6
Q ss_pred hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 283 QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 283 ~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
..|...++.+.++ | .++++||+.||.+|++.|++|++|+ ++.+..+..||+++.+.+-.++..+++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHH
Confidence 3777777776543 2 6999999999999999999999998 777777889999985544445877664
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0003 Score=67.22 Aligned_cols=80 Identities=18% Similarity=0.188 Sum_probs=65.0
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCcc---ceehccChhhHHHHHHHHhhCC--cEEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSH----AAALYAQDQLDHAFD---MVYAELLPQHKEELVELLKKDG--ATAMV 301 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~----~~a~~~a~~~gi~~~---~v~a~~~P~~K~~~v~~l~~~g--~v~mv 301 (473)
.++.|++.+.++.|++.|++++++||.+. ..+....+++||+.. .++-+-...+|....+.+++.| .|+++
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~gy~iv~~i 179 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVEDMGYDIVLFV 179 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHTTTCEEEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCCCChHHHHHHHHhcCCCEEEEE
Confidence 56789999999999999999999999865 477788889999841 2443333468888888998866 79999
Q ss_pred cCCcccHHH
Q 038599 302 GDGINDAPA 310 (473)
Q Consensus 302 GDG~ND~~a 310 (473)
||..+|.++
T Consensus 180 GD~~~Dl~~ 188 (260)
T 3pct_A 180 GDNLNDFGD 188 (260)
T ss_dssp ESSGGGGCG
T ss_pred CCChHHcCc
Confidence 999999775
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00041 Score=65.83 Aligned_cols=63 Identities=24% Similarity=0.343 Sum_probs=50.4
Q ss_pred hhHHHHHHHHhhC-C------cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 283 QHKEELVELLKKD-G------ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 283 ~~K~~~v~~l~~~-g------~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.+|...++.+.++ | .++++||+.||.+|++.|++|++|+ ++.+ . .++++..+++-.++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888877654 3 4999999999999999999999998 7766 3 6788887776666666554
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0021 Score=60.45 Aligned_cols=108 Identities=14% Similarity=0.183 Sum_probs=75.2
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-h------ccChhhHHHHHHHHhhCC-cEE
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-A------ELLPQHKEELVELLKKDG-ATA 299 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a------~~~P~~K~~~v~~l~~~g-~v~ 299 (473)
..++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+..- .++ + ...|+-=..+++.+.-.. .++
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l 191 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCI 191 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeE
Confidence 34578999999999999999998877544 35567788998621 111 1 122334444555555444 799
Q ss_pred EEcCCcccHHHHHHCCe-eEEeCCCCCccccccccEEEecCCcccH
Q 038599 300 MVGDGINDAPALAAVDI-GISMGISGSALAMESGHVILMSNDIRKI 344 (473)
Q Consensus 300 mvGDG~ND~~al~~Adv-gIa~g~~~~~~a~~~ad~vl~~~~l~~l 344 (473)
||||..+|..+-++|++ .|.++ +..+ ...||+++ +++..+
T Consensus 192 ~VGDs~~Di~aA~~aG~~~i~v~-~~~~--~~~ad~vi--~~l~eL 232 (250)
T 4gib_A 192 GIEDASAGIDAINSANMFSVGVG-NYEN--LKKANLVV--DSTNQL 232 (250)
T ss_dssp EEESSHHHHHHHHHTTCEEEEES-CTTT--TTTSSEEE--SSGGGC
T ss_pred EECCCHHHHHHHHHcCCEEEEEC-ChhH--hccCCEEE--CChHhC
Confidence 99999999999999998 56664 3222 34589998 777765
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00047 Score=68.30 Aligned_cols=93 Identities=14% Similarity=0.125 Sum_probs=74.4
Q ss_pred EecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCccceehcc-----------------------
Q 038599 228 SLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ----LDHAFDMVYAEL----------------------- 280 (473)
Q Consensus 228 ~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~----~gi~~~~v~a~~----------------------- 280 (473)
.....+.|++++.++.|+++|++|+++||-+...++.+|.. .||++++|++..
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCC
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccccc
Confidence 34456789999999999999999999999999999999997 688888776621
Q ss_pred -------------------ChhhHHHHHHHHhhCC--cEEEEcCC-cccHHHHHH--CCeeEEe
Q 038599 281 -------------------LPQHKEELVELLKKDG--ATAMVGDG-INDAPALAA--VDIGISM 320 (473)
Q Consensus 281 -------------------~P~~K~~~v~~l~~~g--~v~mvGDG-~ND~~al~~--AdvgIa~ 320 (473)
--+.|...|+..-..| ++++.||+ ..|.+||.. ++.|+.+
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 219 DPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp CGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0257999998877554 89999999 579999975 4444433
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00014 Score=67.72 Aligned_cols=112 Identities=15% Similarity=0.130 Sum_probs=75.6
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc--ChhhHHHHHHHHhh--CC-cEEEEcCCc
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL--LPQHKEELVELLKK--DG-ATAMVGDGI 305 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~--~P~~K~~~v~~l~~--~g-~v~mvGDG~ 305 (473)
-++.|++.+.++.|++.| ++.++|+.+...+..+.+++|+. .+|... ....|..+++.+.+ .. .++||||+.
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~--~~f~~~~~~~~~K~~~~~~~~~~~~~~~~~~vgDs~ 171 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLW--DEVEGRVLIYIHKELMLDQVMECYPARHYVMVDDKL 171 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHH--HHTTTCEEEESSGGGCHHHHHHHSCCSEEEEECSCH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcH--HhcCeeEEecCChHHHHHHHHhcCCCceEEEEcCcc
Confidence 367899999999999999 99999999888888999999985 333211 12234344444333 22 799999999
Q ss_pred c---cHHHHHHCCee-EEeCCCC----C-ccccc--cccEEEecCCcccHHHHH
Q 038599 306 N---DAPALAAVDIG-ISMGISG----S-ALAME--SGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 306 N---D~~al~~Advg-Ia~g~~~----~-~~a~~--~ad~vl~~~~l~~l~~~i 348 (473)
+ |..+-+.|++. |.+. .+ . +...+ .+|+++ +++..+..++
T Consensus 172 ~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~~~~~~i--~~~~el~~~l 222 (231)
T 2p11_A 172 RILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHPPADVTV--ERIGDLVEMD 222 (231)
T ss_dssp HHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSCCCSEEE--SSGGGGGGCG
T ss_pred chhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccCCCceee--cCHHHHHHHH
Confidence 9 66677778863 3333 32 1 11222 388888 6777766544
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00027 Score=63.32 Aligned_cols=89 Identities=19% Similarity=0.278 Sum_probs=62.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCcccee-h-----ccC--hhhHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGD---------------SHAAALYAQDQLDHAFDMVY-A-----ELL--PQHKEEL 288 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD---------------~~~~a~~~a~~~gi~~~~v~-a-----~~~--P~~K~~~ 288 (473)
++.|++.+++++|++.|+++.++|+- ....+..+.+++|+.-+.++ + .-. +..+..+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~v~~s~~~~~~~~~~~KP~p~~ 121 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKL 121 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSCGG
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeEEEEcCCCCcccccccCCCHHH
Confidence 46889999999999999999999987 46677888899998644443 2 111 1112223
Q ss_pred HH----HHhhCC-cEEEEcCCcccHHHHHHCCee-EEe
Q 038599 289 VE----LLKKDG-ATAMVGDGINDAPALAAVDIG-ISM 320 (473)
Q Consensus 289 v~----~l~~~g-~v~mvGDG~ND~~al~~Advg-Ia~ 320 (473)
.+ .+.-.. .++||||..+|..+.++|++. |.+
T Consensus 122 ~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v 159 (176)
T 2fpr_A 122 VERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRY 159 (176)
T ss_dssp GGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEE
Confidence 32 232223 699999999999999999985 444
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0035 Score=59.32 Aligned_cols=57 Identities=14% Similarity=0.037 Sum_probs=43.9
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILA---GDSHAAALYAQDQLDHA 272 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlT---GD~~~~a~~~a~~~gi~ 272 (473)
+..+.+-.||+++- ..++-+++.+++++|++.|++++++| |..........+++|+.
T Consensus 17 ~~~v~~DlDGTLl~----~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 17 IELFILDMDGTFYL----DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp CCEEEECCBTTTEE----TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CCEEEEcCcCcEEe----CCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 34566677888763 35677899999999999999999999 77777766666666653
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0042 Score=59.07 Aligned_cols=111 Identities=13% Similarity=0.125 Sum_probs=72.9
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCc--cceehc---cCh--hhHHHHHHHHhhCC-cEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL---DHAF--DMVYAE---LLP--QHKEELVELLKKDG-ATA 299 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~---gi~~--~~v~a~---~~P--~~K~~~v~~l~~~g-~v~ 299 (473)
-++.|++.++++.|+++|+++.++|+.+...+..+-+.+ |+.. +.++.. ..| +-=..+.+.+.-.. .++
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~~~l 208 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNIL 208 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGEE
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence 467899999999999999999999999888777776644 4642 122221 122 22234444554443 799
Q ss_pred EEcCCcccHHHHHHCCee-EEeCCCCCc---cccccccEEEecCCccc
Q 038599 300 MVGDGINDAPALAAVDIG-ISMGISGSA---LAMESGHVILMSNDIRK 343 (473)
Q Consensus 300 mvGDG~ND~~al~~Advg-Ia~g~~~~~---~a~~~ad~vl~~~~l~~ 343 (473)
||||..+|..+-++|++- |.+...+.. .....+|.++ +++..
T Consensus 209 ~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i--~~l~e 254 (261)
T 1yns_A 209 FLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI--TSFSE 254 (261)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE--SSGGG
T ss_pred EEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEE--CCHHH
Confidence 999999999999999984 444312221 1113467776 55544
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.014 Score=54.41 Aligned_cols=60 Identities=15% Similarity=0.101 Sum_probs=42.7
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCC
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILA---GDSHAAALYAQDQLDH 271 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlT---GD~~~~a~~~a~~~gi 271 (473)
.+.+.+-.||+++---.-.+.+-+++.++++.+++.|+++.++| |.+........+++|+
T Consensus 12 ~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~ 74 (271)
T 2x4d_A 12 VRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGF 74 (271)
T ss_dssp CCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCC
Confidence 45677777888752000012266788999999999999999999 8887776666666665
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00077 Score=61.91 Aligned_cols=87 Identities=22% Similarity=0.137 Sum_probs=59.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hccChhhHH--H-HHHHHhhCC--cEEEEcC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AELLPQHKE--E-LVELLKKDG--ATAMVGD 303 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~~~P~~K~--~-~v~~l~~~g--~v~mvGD 303 (473)
++.|++.+.+++|++.|+++.++|+... .+..+.+++|+.. +.++ ++-....|. . +-+.+++.| . +||||
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~vgD 172 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA-VHVGD 172 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE-EEEES
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe-EEEcC
Confidence 4679999999999999999999998766 4788888999862 1121 111111221 1 222333335 4 99999
Q ss_pred Ccc-cHHHHHHCCeeEEe
Q 038599 304 GIN-DAPALAAVDIGISM 320 (473)
Q Consensus 304 G~N-D~~al~~AdvgIa~ 320 (473)
+.+ |..+.+.|++....
T Consensus 173 ~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 173 IYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp SCCCCCCCSSSCSEEEEE
T ss_pred CchHhHHHHHHCCCeEEE
Confidence 999 99999999986553
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.001 Score=59.44 Aligned_cols=117 Identities=7% Similarity=-0.008 Sum_probs=67.2
Q ss_pred EEEEEecCCCCCHHHHHHHHH---hhhccCCChHHHHHHHHHHHcCCC---CCCCCccccccccCCc-eeEEe---cCe-
Q 038599 115 VTDFQSICDDVSLGTLLYWVS---SIESKSSHPMAAALVDYARSLAIE---PVPENVEDFQNFPGEG-IFGKI---HGN- 183 (473)
Q Consensus 115 V~~i~~~~~~~~~~~ll~~~a---~~e~~s~hpi~~Ai~~~a~~~~~~---~~~~~v~~~~~~~g~g-v~~~v---~g~- 183 (473)
+...... .+.+.++++.+++ ..+....||++.||++++...+.. .....+..++.-+.+. +...+ +|+
T Consensus 4 l~~~~d~-~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~ 82 (170)
T 3gwi_A 4 LENHTDI-SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHH 82 (170)
T ss_dssp EEEEECT-TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEE
T ss_pred EEEEeCC-CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCE
Confidence 3444444 3455566766543 334567899999999876432110 0001122222222222 33333 232
Q ss_pred -EEEEccccccCCCCCC-----------------cchhHHHHhcCCceeeEeee----------------CCeEEEEEEe
Q 038599 184 -VIYIGNRRIGPRTGCS-----------------KDSIAEAKCTGGKTRGYVYL----------------GATPVGTFSL 229 (473)
Q Consensus 184 -~~~iG~~~~~~~~~~~-----------------~~~~~~~~~~~G~~vi~va~----------------d~~~lG~i~l 229 (473)
.+.+|+++.+...+.. .....++++++|+|++.+++ |++|+|+++|
T Consensus 83 ~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~ 162 (170)
T 3gwi_A 83 QLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAF 162 (170)
T ss_dssp EEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEE
T ss_pred EEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhcc
Confidence 5778999876554321 11236788999999999873 5789999999
Q ss_pred cCc
Q 038599 230 SDS 232 (473)
Q Consensus 230 ~d~ 232 (473)
-|.
T Consensus 163 ~~~ 165 (170)
T 3gwi_A 163 LDH 165 (170)
T ss_dssp EC-
T ss_pred ccc
Confidence 885
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0016 Score=63.06 Aligned_cols=88 Identities=11% Similarity=0.034 Sum_probs=65.2
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHH--------cCCCccceeh------ccChhhHHHHHHHH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAA---LYAQDQ--------LDHAFDMVYA------ELLPQHKEELVELL 292 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a---~~~a~~--------~gi~~~~v~a------~~~P~~K~~~v~~l 292 (473)
++++.|++.++++.|+++|+++.++||.....+ ...-+. .|+..+.++. ...|+-|..+.+.+
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~ 265 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKH 265 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCchheeeccCCCCcHHHHHHHHHHHHH
Confidence 577899999999999999999999999875432 333444 6774333332 22366677777777
Q ss_pred hhCC--cEEEEcCCcccHHHHHHCCee
Q 038599 293 KKDG--ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 293 ~~~g--~v~mvGDG~ND~~al~~Advg 317 (473)
.... .++||||..+|..+.++|++-
T Consensus 266 ~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 266 IAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred hccccceEEEeCCcHHHHHHHHHcCCe
Confidence 5443 368999999999999999984
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0054 Score=56.33 Aligned_cols=46 Identities=22% Similarity=0.168 Sum_probs=32.7
Q ss_pred cEEEEcCC-cccHHHHHHCCeeEEe---CCCCCcccc---ccccEEEecCCcccH
Q 038599 297 ATAMVGDG-INDAPALAAVDIGISM---GISGSALAM---ESGHVILMSNDIRKI 344 (473)
Q Consensus 297 ~v~mvGDG-~ND~~al~~AdvgIa~---g~~~~~~a~---~~ad~vl~~~~l~~l 344 (473)
.++++||+ .||..+++.|+++.++ |....+..+ ..+|+++ +++..+
T Consensus 195 ~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~--~~~~el 247 (250)
T 2c4n_A 195 ETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIY--PSVAEI 247 (250)
T ss_dssp GEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEE--SSGGGC
T ss_pred eEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEE--CCHHHh
Confidence 79999999 6999999999998554 422223332 4688888 556544
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.025 Score=52.70 Aligned_cols=89 Identities=16% Similarity=0.071 Sum_probs=63.1
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ce-eh------ccChhhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MV-YA------ELLPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v-~a------~~~P~~K~~~v~~l~~~g-~v~m 300 (473)
.++.|++.+.++.|++.|+++.++|+... +..+-+.+|+..- .+ .+ ...|+-=....+.+.-.. .++|
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~ 171 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIG 171 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEE
Confidence 45789999999999999999999997654 4556788898621 11 11 112333334444554444 7999
Q ss_pred EcCCcccHHHHHHCCe-eEEeC
Q 038599 301 VGDGINDAPALAAVDI-GISMG 321 (473)
Q Consensus 301 vGDG~ND~~al~~Adv-gIa~g 321 (473)
|||..+|..+-++|++ .|.++
T Consensus 172 VgDs~~di~aA~~aG~~~I~V~ 193 (243)
T 4g9b_A 172 IEDAQAGIDAINASGMRSVGIG 193 (243)
T ss_dssp EESSHHHHHHHHHHTCEEEEES
T ss_pred EcCCHHHHHHHHHcCCEEEEEC
Confidence 9999999999999998 45554
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0015 Score=62.37 Aligned_cols=80 Identities=13% Similarity=0.231 Sum_probs=54.1
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC--c--cceehccChhhHHHHHHHHhhCC--cEEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDS---HAAALYAQDQLDHA--F--DMVYAELLPQHKEELVELLKKDG--ATAMV 301 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~---~~~a~~~a~~~gi~--~--~~v~a~~~P~~K~~~v~~l~~~g--~v~mv 301 (473)
.++.|++.++++.|++.|+++.++||.. ...+....+.+|+. . +.+...-.+ .|....+.+...| .++||
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~-~K~~~~~~~~~~~~~~~l~V 178 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE-KGKEKRRELVSQTHDIVLFF 178 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC-CSSHHHHHHHHHHEEEEEEE
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC-CCcHHHHHHHHhCCCceEEe
Confidence 4678999999999999999999999988 44555666788987 1 122222111 1222222233334 68999
Q ss_pred cCCcccHHHH
Q 038599 302 GDGINDAPAL 311 (473)
Q Consensus 302 GDG~ND~~al 311 (473)
||..+|..+.
T Consensus 179 GDs~~Di~aA 188 (258)
T 2i33_A 179 GDNLSDFTGF 188 (258)
T ss_dssp ESSGGGSTTC
T ss_pred CCCHHHhccc
Confidence 9999997764
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=95.82 E-value=0.028 Score=53.20 Aligned_cols=84 Identities=15% Similarity=0.097 Sum_probs=59.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc--C-------------CCccceeh----ccCh--hhHHHHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL--D-------------HAFDMVYA----ELLP--QHKEELV 289 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~--g-------------i~~~~v~a----~~~P--~~K~~~v 289 (473)
-++.|++.+++++ |+++.++|+.+...+..+-+.. | +. .+|. ...| +-=..+.
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~--~~f~~~~~g~KP~p~~~~~a~ 197 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYID--GYFDINTSGKKTETQSYANIL 197 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCC--EEECHHHHCCTTCHHHHHHHH
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcc--eEEeeeccCCCCCHHHHHHHH
Confidence 3567888888877 9999999999998888887776 5 43 3331 1233 2233334
Q ss_pred HHHhhCC-cEEEEcCCcccHHHHHHCCee-EEe
Q 038599 290 ELLKKDG-ATAMVGDGINDAPALAAVDIG-ISM 320 (473)
Q Consensus 290 ~~l~~~g-~v~mvGDG~ND~~al~~Advg-Ia~ 320 (473)
+.+.-.. .++||||..+|..+-++|++- |.+
T Consensus 198 ~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v 230 (253)
T 2g80_A 198 RDIGAKASEVLFLSDNPLELDAAAGVGIATGLA 230 (253)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEE
T ss_pred HHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 4444333 799999999999999999984 444
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0015 Score=62.20 Aligned_cols=53 Identities=21% Similarity=0.228 Sum_probs=45.6
Q ss_pred hhHHHHHHHHhhCC----cEEEEcC----CcccHHHHHHCC-eeEEeCCCCCccccccccEEEec
Q 038599 283 QHKEELVELLKKDG----ATAMVGD----GINDAPALAAVD-IGISMGISGSALAMESGHVILMS 338 (473)
Q Consensus 283 ~~K~~~v~~l~~~g----~v~mvGD----G~ND~~al~~Ad-vgIa~g~~~~~~a~~~ad~vl~~ 338 (473)
-+|...++.| .| .|+++|| +.||.+||+.|+ +|++|+ ++.+..++.||+++.+
T Consensus 196 vsKg~al~~l--~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 196 WDKRYCLDSL--DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPE 257 (262)
T ss_dssp CSTTHHHHHH--TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHH--HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCC
Confidence 3799999998 43 6999999 999999999999 599998 8888888888887743
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.44 E-value=0.0043 Score=57.94 Aligned_cols=108 Identities=11% Similarity=0.016 Sum_probs=63.9
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc-----------cceehccChhhHHHHHHHHh-hCC----
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF-----------DMVYAELLPQHKEELVELLK-KDG---- 296 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~-----------~~v~a~~~P~~K~~~v~~l~-~~g---- 296 (473)
+.+++.+.++.|+ .|+++ ++|+.............|+.. +.+. . ...|...++.+. +.|
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~Kp~~~~~~~~~~~lgi~~~ 197 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMV-V--GKPEKTFFLEALRDADCAPE 197 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEE-C--STTSHHHHHHHGGGGTCCGG
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceE-e--cCCCHHHHHHHHHHcCCChH
Confidence 5678999999999 89998 788765322211111222210 0111 1 122344444433 323
Q ss_pred cEEEEcCCc-ccHHHHHHCCee-EEeCCCC---C-ccc--cccccEEEecCCcccHHHHH
Q 038599 297 ATAMVGDGI-NDAPALAAVDIG-ISMGISG---S-ALA--MESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 297 ~v~mvGDG~-ND~~al~~Advg-Ia~g~~~---~-~~a--~~~ad~vl~~~~l~~l~~~i 348 (473)
.++||||+. ||..+.+.|++- +.+. .+ . +.. ...+|+++ +++..+..++
T Consensus 198 ~~~~iGD~~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~~~~--~~l~~l~~~l 254 (259)
T 2ho4_A 198 EAVMIGDDCRDDVDGAQNIGMLGILVK-TGKYKAADEEKINPPPYLTC--ESFPHAVDHI 254 (259)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEEEEES-STTCCTTGGGGSSSCCSEEE--SCHHHHHHHH
T ss_pred HEEEECCCcHHHHHHHHHCCCcEEEEC-CCCCCcccccccCCCCCEEE--CCHHHHHHHH
Confidence 699999998 999999999984 3333 33 1 111 24578887 7777776654
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.37 E-value=0.004 Score=57.42 Aligned_cols=82 Identities=18% Similarity=0.159 Sum_probs=54.7
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHH----HHHHHcCCCc---cc-eehccC--hhhHHHHHHHHhhCCcEEEEc
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAAL----YAQDQLDHAF---DM-VYAELL--PQHKEELVELLKKDGATAMVG 302 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~----~~a~~~gi~~---~~-v~a~~~--P~~K~~~v~~l~~~g~v~mvG 302 (473)
+.+++.+.+++|+++|+++.++|+.+...+. .+.+..+... +. .+.... |+-...+. ++.|.++|||
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~---~~~g~~l~VG 165 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWL---QDKNIRIFYG 165 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHH---HHTTEEEEEE
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccccccchhhhcCCCCCHHHHHHHH---HHCCCEEEEE
Confidence 4678999999999999999999998643222 2333344320 00 122222 33343443 4445599999
Q ss_pred CCcccHHHHHHCCee
Q 038599 303 DGINDAPALAAVDIG 317 (473)
Q Consensus 303 DG~ND~~al~~Advg 317 (473)
|..+|..+.++|++-
T Consensus 166 Ds~~Di~aA~~aG~~ 180 (211)
T 2b82_A 166 DSDNDITAARDVGAR 180 (211)
T ss_dssp SSHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHCCCe
Confidence 999999999999984
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.27 E-value=0.0013 Score=61.88 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=41.0
Q ss_pred hHHHHHHHHhhCC----cEEEEcC----CcccHHHHHHCCe-eEEeCCCCCccccccccEE
Q 038599 284 HKEELVELLKKDG----ATAMVGD----GINDAPALAAVDI-GISMGISGSALAMESGHVI 335 (473)
Q Consensus 284 ~K~~~v~~l~~~g----~v~mvGD----G~ND~~al~~Adv-gIa~g~~~~~~a~~~ad~v 335 (473)
+|...++.| .| .|+.+|| +.||.+||+.|+. |++|+ ++.+..++.||+|
T Consensus 188 ~Kg~al~~l--~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHV--ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGT--TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred chHHHHHHH--hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 788888888 32 6999999 9999999999988 99998 8888888888875
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=0.032 Score=56.88 Aligned_cols=107 Identities=17% Similarity=0.141 Sum_probs=70.2
Q ss_pred ceeeEeeeCCeEEEEEE----ecC-----ccCCchHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHcC
Q 038599 212 KTRGYVYLGATPVGTFS----LSD-----SCRSGALEAIKDLKSLGIKSFILAGDS------------HAAALYAQDQLD 270 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~----l~d-----~lr~~a~~~I~~L~~~gi~v~mlTGD~------------~~~a~~~a~~~g 270 (473)
.+.+++-.||+++---. ..+ .+-|++.++++.|+++|+++.++|+.+ ...+..+.+++|
T Consensus 58 ~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lg 137 (416)
T 3zvl_A 58 GKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLG 137 (416)
T ss_dssp SSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHT
T ss_pred CeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcC
Confidence 45666777777653110 000 257999999999999999999999955 223677888999
Q ss_pred CCccceehc-------cChhhHHHHHHHHh----hCC-cEEEEcCCc-----------------ccHHHHHHCCeeE
Q 038599 271 HAFDMVYAE-------LLPQHKEELVELLK----KDG-ATAMVGDGI-----------------NDAPALAAVDIGI 318 (473)
Q Consensus 271 i~~~~v~a~-------~~P~~K~~~v~~l~----~~g-~v~mvGDG~-----------------ND~~al~~AdvgI 318 (473)
+.-+.+++. ..|+-=..+.+.+. -.. .++||||.. +|..+-+.|++-.
T Consensus 138 l~fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f 214 (416)
T 3zvl_A 138 VPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPF 214 (416)
T ss_dssp SCCEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCE
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcc
Confidence 764444322 12332333444443 122 799999997 6888888887753
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=94.69 E-value=0.00068 Score=61.23 Aligned_cols=78 Identities=18% Similarity=0.236 Sum_probs=56.9
Q ss_pred CccCCchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCccc-
Q 038599 231 DSCRSGALEAIKDLKSL-GIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGIND- 307 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~-gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND- 307 (473)
-++.|++.+++++|++. |+++.++|+.+...+..+.+++|+ -+.+++ + ...+.+.-.. .++|+||+.+|
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl-f~~i~~---~----~~~~~~~~~~~~~~~vgDs~~dD 143 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW-VEQHLG---P----QFVERIILTRDKTVVLGDLLIDD 143 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH-HHHHHC---H----HHHTTEEECSCGGGBCCSEEEES
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc-hhhhcC---H----HHHHHcCCCcccEEEECCchhhC
Confidence 45789999999999999 999999999988777777777776 223332 1 1333333333 68999999998
Q ss_pred ---HHHHH-HCCe
Q 038599 308 ---APALA-AVDI 316 (473)
Q Consensus 308 ---~~al~-~Adv 316 (473)
..+-+ .|++
T Consensus 144 ~~~i~~A~~~aG~ 156 (193)
T 2i7d_A 144 KDTVRGQEETPSW 156 (193)
T ss_dssp SSCCCSSCSSCSS
T ss_pred cHHHhhccccccc
Confidence 66555 6665
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=94.63 E-value=0.067 Score=54.96 Aligned_cols=89 Identities=17% Similarity=0.160 Sum_probs=57.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCC------CHHHHHHHHHHcCCCcccee-h------ccChhhHHHHHHHHhhCC-c
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGD------SHAAALYAQDQLDHAFDMVY-A------ELLPQHKEELVELLKKDG-A 297 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD------~~~~a~~~a~~~gi~~~~v~-a------~~~P~~K~~~v~~l~~~g-~ 297 (473)
++.|++.++++.|+++|+++.++|+- ...........+.-.-+.++ + ...|+-=..+.+.+.-.. .
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p~~ 179 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 179 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCChhH
Confidence 57899999999999999999999985 33332222112221111222 2 122333444445554443 7
Q ss_pred EEEEcCCcccHHHHHHCCeeEEe
Q 038599 298 TAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 298 v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
++||||..||..+.+.|++....
T Consensus 180 ~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 180 VVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp EEEEESCHHHHHHHHHHTCEEEE
T ss_pred EEEECCcHHHHHHHHHcCCEEEE
Confidence 99999999999999999996554
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=93.98 E-value=0.17 Score=47.32 Aligned_cols=109 Identities=11% Similarity=0.118 Sum_probs=62.3
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHH-------------HHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHA-------------AALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~-------------~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g 296 (473)
...+.|++.++++.|+ .|++. ++|+.+.. -...+..-.+.. +.......|+-=..+.+.+.-..
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~-~~~~~KP~p~~~~~~~~~~~~~~ 200 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTK-PVYIGKPKAIIMERAIAHLGVEK 200 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCC-CEECSTTSHHHHHHHHHHHCSCG
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCC-ccccCCCCHHHHHHHHHHcCCCH
Confidence 4456789999999997 89987 77765431 111222223322 01112222333333444444333
Q ss_pred -cEEEEcCC-cccHHHHHHCCee-EEe--CCCCCccccc---cccEEEecCCccc
Q 038599 297 -ATAMVGDG-INDAPALAAVDIG-ISM--GISGSALAME---SGHVILMSNDIRK 343 (473)
Q Consensus 297 -~v~mvGDG-~ND~~al~~Advg-Ia~--g~~~~~~a~~---~ad~vl~~~~l~~ 343 (473)
.++||||+ .||..+.++|++. |.+ |....+...+ .+|+++ +++..
T Consensus 201 ~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~--~~l~e 253 (264)
T 1yv9_A 201 EQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVV--DSLDE 253 (264)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEE--SSGGG
T ss_pred HHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEE--ecHHH
Confidence 79999999 6999999999986 333 3111112222 588888 55544
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=93.67 E-value=0.08 Score=51.08 Aligned_cols=113 Identities=16% Similarity=0.112 Sum_probs=65.7
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHH--------------HHHHHHHcCCCccce-ehccChhhHHHHHHHHhhCC-
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAA--------------ALYAQDQLDHAFDMV-YAELLPQHKEELVELLKKDG- 296 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~--------------a~~~a~~~gi~~~~v-~a~~~P~~K~~~v~~l~~~g- 296 (473)
+.+++.++++.|++.|+ +.++|...... ...+....+.. .+ .....|+-=..+.+.+.-..
T Consensus 157 ~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~--~~~~~KP~~~~~~~~~~~lgi~~~ 233 (306)
T 2oyc_A 157 SFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQ--ALVVGKPSPYMFECITENFSIDPA 233 (306)
T ss_dssp CHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCC--CEECSTTSTHHHHHHHHHSCCCGG
T ss_pred CHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCC--ceeeCCCCHHHHHHHHHHcCCChH
Confidence 46788999999999999 77777654321 12222222322 11 11112222222233332222
Q ss_pred cEEEEcCCc-ccHHHHHHCCeeEEeCCCCC---ccc---------cccccEEEecCCcccHHHHHHH
Q 038599 297 ATAMVGDGI-NDAPALAAVDIGISMGISGS---ALA---------MESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 297 ~v~mvGDG~-ND~~al~~AdvgIa~g~~~~---~~a---------~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
.++||||+. ||..+.+.|++...+=..|. +.. ...+|+++ +++..+...++.
T Consensus 234 e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi--~~l~el~~~l~~ 298 (306)
T 2oyc_A 234 RTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYV--ESIADLTEGLED 298 (306)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEE--SSGGGGGGGC--
T ss_pred HEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEE--CCHHHHHHHHHh
Confidence 799999996 99999999999766521222 111 13688988 778888776553
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=92.64 E-value=0.0016 Score=58.99 Aligned_cols=77 Identities=17% Similarity=0.194 Sum_probs=54.6
Q ss_pred CccCCchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCccc-eehccChhhHHHHHHHHhhCC-cEEEEcCCccc
Q 038599 231 DSCRSGALEAIKDLKSL-GIKSFILAGDSHAAALYAQDQLDHAFDM-VYAELLPQHKEELVELLKKDG-ATAMVGDGIND 307 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~-gi~v~mlTGD~~~~a~~~a~~~gi~~~~-v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND 307 (473)
-++.|++.++++.|++. |+++.++|+-....+....+++|+. . +|. ....+.+.-.. .++|+||..+|
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~--~~~f~-------~~~~~~l~~~~~~~~~vgDs~~d 144 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWV--EKYFG-------PDFLEQIVLTRDKTVVSADLLID 144 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHH--HHHHC-------GGGGGGEEECSCSTTSCCSEEEE
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchH--HHhch-------HHHHHHhccCCccEEEECccccc
Confidence 35789999999999999 9999999998876666666777765 3 332 11122222223 68899999998
Q ss_pred ----HHHHH-HCCe
Q 038599 308 ----APALA-AVDI 316 (473)
Q Consensus 308 ----~~al~-~Adv 316 (473)
..+-+ .|++
T Consensus 145 D~~~~~~a~~~aG~ 158 (197)
T 1q92_A 145 DRPDITGAEPTPSW 158 (197)
T ss_dssp SCSCCCCSCSSCSS
T ss_pred CCchhhhcccCCCc
Confidence 76655 6665
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.17 E-value=0.042 Score=49.98 Aligned_cols=87 Identities=15% Similarity=0.078 Sum_probs=64.6
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---ceehccChhhHHHHHHHHhhCC----cEEEEcC
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---MVYAELLPQHKEELVELLKKDG----ATAMVGD 303 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---~v~a~~~P~~K~~~v~~l~~~g----~v~mvGD 303 (473)
-.+||++.+.+++|++. +++++.|.-....|..+.+.+|+..- .++.+-....|..+++.|+.-| .+.+|+|
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k~~~lK~L~~Lg~~~~~~vivDD 145 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDN 145 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEETTEEECCGGGSSSCGGGEEEEES
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceecCCceeeeHhHhCCChhHEEEEEC
Confidence 35799999999999998 99999999999999999999998731 1222222234544555555544 6999999
Q ss_pred CcccHHHHHHCCeeE
Q 038599 304 GINDAPALAAVDIGI 318 (473)
Q Consensus 304 G~ND~~al~~AdvgI 318 (473)
..++..+-..+++-|
T Consensus 146 s~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 146 SPASYIFHPENAVPV 160 (195)
T ss_dssp CGGGGTTCGGGEEEC
T ss_pred CHHHhhhCccCccEE
Confidence 999987655555443
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=91.92 E-value=0.048 Score=48.87 Aligned_cols=86 Identities=14% Similarity=0.094 Sum_probs=63.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---ceehccChhhHHHHHHHHhhCC----cEEEEcCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---MVYAELLPQHKEELVELLKKDG----ATAMVGDG 304 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---~v~a~~~P~~K~~~v~~l~~~g----~v~mvGDG 304 (473)
..||++.+.++++++. +++++.|.-....|..+.+.+|...- .++.+-....|..+++.|+.-| .+.+|||.
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs 133 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNS 133 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECSC
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeCC
Confidence 5799999999999998 99999999999999999999998731 1222222223434455555544 69999999
Q ss_pred cccHHHHHHCCeeE
Q 038599 305 INDAPALAAVDIGI 318 (473)
Q Consensus 305 ~ND~~al~~AdvgI 318 (473)
.+|..+-..+++-|
T Consensus 134 ~~~~~~~~~ngi~i 147 (181)
T 2ght_A 134 PASYVFHPDNAVPV 147 (181)
T ss_dssp GGGGTTCTTSBCCC
T ss_pred HHHhccCcCCEeEe
Confidence 99977655555544
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=91.78 E-value=0.26 Score=42.38 Aligned_cols=56 Identities=14% Similarity=-0.063 Sum_probs=41.0
Q ss_pred eeeEeeeCCeEEEEEEecC-----ccCCchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSD-----SCRSGALEAIKDLKSLGIKSFILAGDS---HAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d-----~lr~~a~~~I~~L~~~gi~v~mlTGD~---~~~a~~~a~~~gi~ 272 (473)
..+++-.||+++- .+ +.-|++.++|++|+++|+.++++||.+ ...+....++.|+.
T Consensus 4 k~i~~DlDGTL~~----~~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 4 MTIAVDFDGTIVE----HRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp CEEEECCBTTTBC----SCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred eEEEEECcCCCCC----CCCccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 3455566666542 22 245789999999999999999999998 45556666777775
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=91.73 E-value=0.34 Score=42.49 Aligned_cols=100 Identities=11% Similarity=0.115 Sum_probs=60.4
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCC---CH--H-HHHHHHHHcCCCc--cceehccChhhHHHHHHHHhhCCcEEEEc
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGD---SH--A-AALYAQDQLDHAF--DMVYAELLPQHKEELVELLKKDGATAMVG 302 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD---~~--~-~a~~~a~~~gi~~--~~v~a~~~P~~K~~~v~~l~~~g~v~mvG 302 (473)
-++.|++.+.++.|++. +++.++|+- .. . +...+.+..|... +.+++. ++ . .+ +.++|||
T Consensus 68 ~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~---~~-~----~l---~~~l~ie 135 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCG---RK-N----II---LADYLID 135 (180)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECS---CG-G----GB---CCSEEEE
T ss_pred CCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeC---Cc-C----ee---cccEEec
Confidence 35789999999999985 999999987 31 1 1223444455431 133322 22 1 11 4579999
Q ss_pred CCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHH
Q 038599 303 DGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 303 DG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
|..+|+. ++|+-.|.+. .+.. ....++.++ +++..+..++
T Consensus 136 Ds~~~i~--~aaG~~i~~~-~~~~-~~~~~~~~i--~~~~el~~~l 175 (180)
T 3bwv_A 136 DNPKQLE--IFEGKSIMFT-ASHN-VYEHRFERV--SGWRDVKNYF 175 (180)
T ss_dssp SCHHHHH--HCSSEEEEEC-CGGG-TTCCSSEEE--CSHHHHHHHH
T ss_pred CCcchHH--HhCCCeEEeC-CCcc-cCCCCceec--CCHHHHHHHH
Confidence 9999975 4566555553 2211 113466666 6677766554
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=91.52 E-value=0.51 Score=44.86 Aligned_cols=81 Identities=11% Similarity=0.122 Sum_probs=59.3
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------cee--------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------MVY-------- 277 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------~v~-------- 277 (473)
+.+++-.||+++. -+..+.+.+.++++++++.|+++.++||.+...+..+.+++|+... .++
T Consensus 5 kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~~~ 81 (288)
T 1nrw_A 5 KLIAIDLDGTLLN---SKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYH 81 (288)
T ss_dssp CEEEEECCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCEEE
T ss_pred EEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCcEEE
Confidence 4566677888753 2334677889999999999999999999999999999999987632 111
Q ss_pred -hccChhhHHHHHHHHhhCC
Q 038599 278 -AELLPQHKEELVELLKKDG 296 (473)
Q Consensus 278 -a~~~P~~K~~~v~~l~~~g 296 (473)
..+.++.-.++++.+++.|
T Consensus 82 ~~~~~~~~~~~i~~~l~~~~ 101 (288)
T 1nrw_A 82 HETIDKKRAYDILSWLESEN 101 (288)
T ss_dssp ECCCCHHHHHHHHHHHHHTT
T ss_pred EeeCCHHHHHHHHHHHHHCC
Confidence 1124555667777777777
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=90.84 E-value=1.1 Score=41.77 Aligned_cols=110 Identities=14% Similarity=0.065 Sum_probs=64.6
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHH-------------HHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHA-------------AALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG- 296 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~-------------~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g- 296 (473)
..+.|++.++++.|+ .|++. ++|+.+.. -...+....+... .......|+-=..+.+. -..
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~-~~~~KP~~~~~~~~~~~--~~~~ 203 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEP-IIIGKPNEPMYEVVREM--FPGE 203 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCC-EECSTTSHHHHHHHHHH--STTC
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCc-cEecCCCHHHHHHHHHh--CCcc
Confidence 345679999999999 89988 77754321 1223333344331 11222233322223333 223
Q ss_pred cEEEEcCCc-ccHHHHHHCCee-EEeCCCCC---cccc---ccccEEEecCCcccHHHHH
Q 038599 297 ATAMVGDGI-NDAPALAAVDIG-ISMGISGS---ALAM---ESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 297 ~v~mvGDG~-ND~~al~~Advg-Ia~g~~~~---~~a~---~~ad~vl~~~~l~~l~~~i 348 (473)
.++||||.. +|..+.++|++. +.+. .|. +... ..+|+++ +++..+...+
T Consensus 204 ~~~~VGD~~~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~p~~~~--~~l~el~~~l 260 (263)
T 1zjj_A 204 ELWMVGDRLDTDIAFAKKFGMKAIMVL-TGVSSLEDIKKSEYKPDLVL--PSVYELIDYL 260 (263)
T ss_dssp EEEEEESCTTTHHHHHHHTTCEEEEES-SSSCCHHHHTTCSSCCSEEE--SSGGGGGGGG
T ss_pred cEEEECCChHHHHHHHHHcCCeEEEEC-CCCCChHHHHhcCCCCCEEE--CCHHHHHHHH
Confidence 899999995 999999999984 4553 332 1111 1578888 6777766543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=90.72 E-value=0.37 Score=45.14 Aligned_cols=97 Identities=13% Similarity=0.122 Sum_probs=59.4
Q ss_pred eeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---cCCCcc--ceehccChhhHHHH
Q 038599 214 RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ---LDHAFD--MVYAELLPQHKEEL 288 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~---~gi~~~--~v~a~~~P~~K~~~ 288 (473)
.+.+-.|++++- .+..-+++.+++++|++.|+++.++||........+.++ +|+... .++... ..-...
T Consensus 3 ~i~~D~DGtL~~----~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~--~~~~~~ 76 (263)
T 1zjj_A 3 AIIFDMDGVLYR----GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG--LATRLY 76 (263)
T ss_dssp EEEEECBTTTEE----TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHH--HHHHHH
T ss_pred EEEEeCcCceEe----CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecH--HHHHHH
Confidence 345556777653 344458999999999999999999999987665555554 687521 232211 111222
Q ss_pred HHHHhhCCcEEEEcCCcccHHHHHHCCee
Q 038599 289 VELLKKDGATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 289 v~~l~~~g~v~mvGDG~ND~~al~~Advg 317 (473)
++.......+..+|+. .....++..++.
T Consensus 77 l~~~~~~~~v~viG~~-~l~~~l~~~G~~ 104 (263)
T 1zjj_A 77 MSKHLDPGKIFVIGGE-GLVKEMQALGWG 104 (263)
T ss_dssp HHHHSCCCCEEEESCH-HHHHHHHHHTSC
T ss_pred HHHhCCCCEEEEEcCH-HHHHHHHHcCCe
Confidence 2222222378999984 455566665543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=89.30 E-value=0.064 Score=50.40 Aligned_cols=44 Identities=23% Similarity=0.212 Sum_probs=35.7
Q ss_pred hhHHHHHHHHhhCC-cEEEEcC----CcccHHHHHHCC-eeEEeCCCCCcc
Q 038599 283 QHKEELVELLKKDG-ATAMVGD----GINDAPALAAVD-IGISMGISGSAL 327 (473)
Q Consensus 283 ~~K~~~v~~l~~~g-~v~mvGD----G~ND~~al~~Ad-vgIa~g~~~~~~ 327 (473)
-+|..-++.|.+.. .++.+|| |.||.+||+.|+ +|++++ +..+.
T Consensus 186 v~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~ 235 (246)
T 3f9r_A 186 WDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDT 235 (246)
T ss_dssp CSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHH
T ss_pred CCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHH
Confidence 37888888888733 8999999 799999999996 899996 44443
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=87.23 E-value=0.71 Score=45.78 Aligned_cols=97 Identities=15% Similarity=0.091 Sum_probs=65.4
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHcCCCc--cceehccChhhHH
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDS----HAAALYAQDQLDHAF--DMVYAELLPQHKE 286 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~----~~~a~~~a~~~gi~~--~~v~a~~~P~~K~ 286 (473)
..+.+-.||++. -.+.+-|++.++++.|++.|+++.++|+.. ...+..+.+.+|++. ++++...+|-..
T Consensus 14 ~~~l~D~DGvl~----~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~- 88 (352)
T 3kc2_A 14 IAFAFDIDGVLF----RGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKS- 88 (352)
T ss_dssp EEEEECCBTTTE----ETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGG-
T ss_pred CEEEEECCCeeE----cCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHH-
Confidence 445555666543 356677999999999999999999999875 455666666788853 356655444321
Q ss_pred HHHHHHhhCCcEEEEcCCcccHHHHHHCCeeEE
Q 038599 287 ELVELLKKDGATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 287 ~~v~~l~~~g~v~mvGDG~ND~~al~~AdvgIa 319 (473)
+ ++..++|..+|.. .....++.+++-..
T Consensus 89 -~---~~~~~~v~viG~~-~l~~~l~~~G~~~v 116 (352)
T 3kc2_A 89 -L---VNKYSRILAVGTP-SVRGVAEGYGFQDV 116 (352)
T ss_dssp -G---TTTCSEEEEESST-THHHHHHHHTCSEE
T ss_pred -H---HhcCCEEEEECCH-HHHHHHHhCCCeEe
Confidence 1 2222389999865 44567788777655
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=85.78 E-value=0.42 Score=46.06 Aligned_cols=82 Identities=21% Similarity=0.183 Sum_probs=60.0
Q ss_pred ceeeEeeeCCeEEEEEEe-cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH--HHcC-CC---cc-------cee
Q 038599 212 KTRGYVYLGATPVGTFSL-SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ--DQLD-HA---FD-------MVY 277 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l-~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a--~~~g-i~---~~-------~v~ 277 (473)
.+.+++-.||+++. - ...+.+.+.++|++|+++|++++++||.+...+..+. +++| +. .. .++
T Consensus 27 ikli~~DlDGTLl~---~~~~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~ 103 (301)
T 2b30_A 27 IKLLLIDFDGTLFV---DKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVY 103 (301)
T ss_dssp CCEEEEETBTTTBC---CTTTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEE
T ss_pred ccEEEEECCCCCcC---CCCCccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEE
Confidence 36777778888853 2 3357778999999999999999999999999999998 8887 64 11 111
Q ss_pred ---------hccChhhHHHHHHHHhhCC
Q 038599 278 ---------AELLPQHKEELVELLKKDG 296 (473)
Q Consensus 278 ---------a~~~P~~K~~~v~~l~~~g 296 (473)
..++++.-.++++.+++.+
T Consensus 104 ~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 131 (301)
T 2b30_A 104 DQIGYTLLDETIETDVYAELISYLVEKN 131 (301)
T ss_dssp CTTCCEEEECCCCHHHHHHHHHHHHHTT
T ss_pred eCCCCEEEEccCCHHHHHHHHHHHHHcC
Confidence 1234566666777777654
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=81.45 E-value=0.68 Score=43.72 Aligned_cols=80 Identities=15% Similarity=0.117 Sum_probs=48.1
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHH--------------HHHHHHcCCCccceehccChhhHHHHHHHH----hhCC-
Q 038599 236 GALEAIKDLKSLGIKSFILAGDSHAAA--------------LYAQDQLDHAFDMVYAELLPQHKEELVELL----KKDG- 296 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~~~~a--------------~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l----~~~g- 296 (473)
...+.++.|++.|++ .++|+.+.... ..+..-++-. +.......|+-=..+.+.+ .-..
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~-~~~~~KP~p~~~~~a~~~l~~~~~~~~~ 226 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRR-FIRFGKPDSQMFMFAYDMLRQKMEISKR 226 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSC-EEEESTTSSHHHHHHHHHHHTTSCCCGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCc-eeEecCCCHHHHHHHHHHHhhccCCCcc
Confidence 667777789999999 78775432211 1111122211 1122233444444455566 3333
Q ss_pred cEEEEcCCc-ccHHHHHHCCee
Q 038599 297 ATAMVGDGI-NDAPALAAVDIG 317 (473)
Q Consensus 297 ~v~mvGDG~-ND~~al~~Advg 317 (473)
.++||||.. +|..+-++|++.
T Consensus 227 ~~~~VGD~~~~Di~~A~~aG~~ 248 (284)
T 2hx1_A 227 EILMVGDTLHTDILGGNKFGLD 248 (284)
T ss_dssp GEEEEESCTTTHHHHHHHHTCE
T ss_pred eEEEECCCcHHHHHHHHHcCCe
Confidence 799999995 999999999984
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=80.09 E-value=0.82 Score=42.60 Aligned_cols=85 Identities=19% Similarity=0.322 Sum_probs=56.2
Q ss_pred eeEeeeCCeEEEEEEecCc-cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC----CCc-------------cc
Q 038599 214 RGYVYLGATPVGTFSLSDS-CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLD----HAF-------------DM 275 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~-lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~g----i~~-------------~~ 275 (473)
.+++-.||+++- -+.. +.+.+++++++++++|+.+.++||.+ ..+..+.+++| +.. +.
T Consensus 4 li~~DlDGTLl~---~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~ 79 (261)
T 2rbk_A 4 ALFFDIDGTLVS---FETHRIPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGEEV 79 (261)
T ss_dssp EEEECSBTTTBC---TTTSSCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETTEE
T ss_pred EEEEeCCCCCcC---CCCCcCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECCEE
Confidence 445556777642 1222 66788999999999999999999999 77776667776 431 01
Q ss_pred eeh-ccChhhHHHHHHHHhhCC-cEEEEc
Q 038599 276 VYA-ELLPQHKEELVELLKKDG-ATAMVG 302 (473)
Q Consensus 276 v~a-~~~P~~K~~~v~~l~~~g-~v~mvG 302 (473)
++. .+.++.-.++++.+++.+ .....+
T Consensus 80 i~~~~l~~~~~~~i~~~~~~~~~~~~~~~ 108 (261)
T 2rbk_A 80 IYKSAIPQEEVKAMAAFCEKKGVPCIFVE 108 (261)
T ss_dssp EEECCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred EEecCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 222 234556667777777766 544443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 473 | ||||
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 2e-22 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 1e-18 | |
| d2b8ea2 | 113 | d.220.1.1 (A:435-547) Cation-transporting ATPase { | 7e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 4e-08 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 2e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-06 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 5e-05 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 8e-05 | |
| d2a29a1 | 136 | d.220.1.1 (A:316-451) Potassium-transporting ATPas | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 0.001 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 0.002 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.003 |
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 90.5 bits (224), Expect = 2e-22
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 216 YVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDM 275
V T T D+ + A A+++LK +GIK ++ GD+ +A +L+ +
Sbjct: 5 AVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI 64
Query: 276 VYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVI 335
P K E V+ L+ A VGDGINDAPALA D+GI++G SGS +A+ESG ++
Sbjct: 65 AEVL--PHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIV 121
Query: 336 LMSNDIRKIPKAIK 349
L+ +D+R + AI+
Sbjct: 122 LIRDDLRDVVAAIQ 135
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 81.0 bits (199), Expect = 1e-18
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 31/158 (19%)
Query: 222 TPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL------------ 269
T T + D R + +I+ + GI+ ++ GD+ A+ ++
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 270 -----------------DHAFDMVYAELLPQHKEELVELLKKD-GATAMVGDGINDAPAL 311
+A + P HK ++VE L+ TAM GDG+NDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 312 AAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349
+IGI+MG SG+A+A + ++L ++ I A++
Sbjct: 130 KKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVE 166
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 113 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 54.4 bits (130), Expect = 7e-10
Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 12/120 (10%)
Query: 115 VTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGE 174
VTD + + LL + E +S HP+A A+V A IE E + GE
Sbjct: 2 VTDLVPL--NGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEP--EKVEVIAGE 57
Query: 175 GIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAK----CTGGKTRGYVYLGATPVGTFSLS 230
G+ I +GN+R+ G + + E KT V G ++S
Sbjct: 58 GVVADG----ILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVS 113
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 51.5 bits (122), Expect = 4e-08
Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 3/119 (2%)
Query: 244 LKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGA-TAMVG 302
L+ + K I + Y H+ + K ++ L + M+G
Sbjct: 109 LEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIG 168
Query: 303 DGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQN 361
D + D A D+ + E L D +I K I+ ++ + +QN
Sbjct: 169 DSVTDVEAAKLSDLCFARDY-LLNECREQNLNHLPYQDFYEIRKEIENVKEVQ-EWLQN 225
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 51.0 bits (121), Expect = 1e-07
Identities = 18/160 (11%), Positives = 38/160 (23%), Gaps = 46/160 (28%)
Query: 234 RSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA--FD----------------- 274
+ DLK G + I G + + + L F+
Sbjct: 217 VDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMY 276
Query: 275 -----------------MVYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPALAAVD- 315
+ + + +VGD + D + +
Sbjct: 277 PQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGA 336
Query: 316 --IGISMGISGSA----LAMESGHVILMSNDIRKIPKAIK 349
IG G+ G L ++ N + ++ +
Sbjct: 337 TFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVLD 374
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (116), Expect = 2e-07
Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 22/105 (20%)
Query: 239 EAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLP---------------- 282
E + L+ ++ F+++G + + +L+ V+A L
Sbjct: 89 ELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPT 148
Query: 283 ---QHKEELVELLKKD---GATAMVGDGINDAPALAAVDIGISMG 321
K ++++LLK+ M+GDG D A D I G
Sbjct: 149 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG 193
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.0 bits (108), Expect = 2e-06
Identities = 9/55 (16%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Query: 299 AMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARK 353
GD ND L+ GI + + E + + +K + +
Sbjct: 149 IAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFLKASSR 202
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 42.1 bits (97), Expect = 5e-05
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 299 AMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349
VGDG ND + I+ + E + + D+R+I K IK
Sbjct: 162 VAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILKYIK 210
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 41.2 bits (96), Expect = 8e-05
Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 10/130 (7%)
Query: 213 TRGYVYLGAT--PVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLD 270
T G ++ A + +F + D IK L I+ +L+G L
Sbjct: 17 TDGQLHYDANGEAIKSFHVRDGL------GIKMLMDADIQVAVLSGRDSPILRRRIADLG 70
Query: 271 HAFDMVYAELLPQHKEELVELLKKDGA-TAMVGDGINDAPALAAVDIGISMGISGSALAM 329
+ +L++ TA +GD D PA AA ++
Sbjct: 71 IKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVK 129
Query: 330 ESGHVILMSN 339
+ +L ++
Sbjct: 130 NAVDHVLSTH 139
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} Length = 136 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Score = 39.7 bits (92), Expect = 2e-04
Identities = 20/130 (15%), Positives = 33/130 (25%), Gaps = 14/130 (10%)
Query: 115 VTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPE-NVEDFQNFPG 173
++F V TL P ++V A+ + P
Sbjct: 4 ASEFIPA-QGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPF 62
Query: 174 ----EGIFGKIHGNVIYIGNRRIGPRTGCSK--------DSIAEAKCTGGKTRGYVYLGA 221
I +I G+ R + D + G T V G+
Sbjct: 63 TAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS 122
Query: 222 TPVGTFSLSD 231
+G +L D
Sbjct: 123 RVLGVIALKD 132
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 38.4 bits (88), Expect = 0.001
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 298 TAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349
TA VGD +ND L A G++MG + + ++ND + +K
Sbjct: 232 TAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 37.2 bits (85), Expect = 0.002
Identities = 10/52 (19%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 298 TAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349
+GD ND + +G+++ + E + + SN + AI+
Sbjct: 216 IMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 36.9 bits (84), Expect = 0.003
Identities = 33/260 (12%), Positives = 68/260 (26%), Gaps = 45/260 (17%)
Query: 96 KVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARS 155
K+K +++D GT+T + + A + A S
Sbjct: 1 KIKAISIDIDGTITYPNRMIHEK---------------------------ALEAIRRAES 33
Query: 156 LAIEPVP------ENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCT 209
L I + + E G ++ ++ I +
Sbjct: 34 LGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIR 93
Query: 210 GGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL 269
P L + +E ++++ + + + A +
Sbjct: 94 KRFPNARTSYT-MPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWIN 152
Query: 270 DHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDIGISMGISGSALAM 329
+ +E L +E A VGDG ND A V +++ +
Sbjct: 153 KGSGIEKASEFLGIKPKE----------VAHVGDGENDLDAFKVVGYKVAVA-QAPKILK 201
Query: 330 ESGHVILMSNDIRKIPKAIK 349
E+ + +AI
Sbjct: 202 ENADYVTKKEYGEGGAEAIY 221
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 473 | |||
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.97 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.77 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.48 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 99.37 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.23 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.17 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.17 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.12 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.07 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.07 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.03 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.98 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.9 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.87 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.85 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.81 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.78 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.78 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.54 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.49 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.25 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.25 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.14 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 98.1 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 98.09 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.0 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.94 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.82 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.77 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.68 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.67 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.66 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.6 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.56 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.38 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.3 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 97.26 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 97.25 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.22 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 97.08 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 97.07 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 97.0 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.9 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.82 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.71 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 96.55 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.53 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.52 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 96.5 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 96.19 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 96.19 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.94 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 94.98 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 93.97 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 91.82 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 86.18 |
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.97 E-value=8.6e-31 Score=226.55 Aligned_cols=132 Identities=40% Similarity=0.603 Sum_probs=116.6
Q ss_pred eEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhh
Q 038599 215 GYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKK 294 (473)
Q Consensus 215 i~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~ 294 (473)
.++..|++..+.++++|++|++++++|+.||++|++++|+|||+..++.++|+++||+ ++|++++|++|..+|+.+|+
T Consensus 4 ~~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--~v~~~~~p~~k~~~v~~~q~ 81 (135)
T d2b8ea1 4 TAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQA 81 (135)
T ss_dssp CEEEEECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCHHHHHHHHHHHTT
T ss_pred EEEEECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh--hhccccchhHHHHHHHHHHc
Confidence 3556677777788999999999999999999999999999999999999999999998 99999999999999999998
Q ss_pred CCcEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 295 DGATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 295 ~g~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.+.|+|+|||.||+|||++|||||+++ ++++.++++||+++++++|+.|+.+++
T Consensus 82 ~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 82 KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp TSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred CCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 789999999999999999999999998 889999999999999999999998764
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=2.1e-30 Score=232.72 Aligned_cols=122 Identities=32% Similarity=0.533 Sum_probs=116.8
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------------------ceehc
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-----------------------------MVYAE 279 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-----------------------------~v~a~ 279 (473)
..||+|++++++|+.||++|++++|+|||+..+|.++|+++||..+ .+|++
T Consensus 17 ~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 96 (168)
T d1wpga2 17 QLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFAR 96 (168)
T ss_dssp CECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEES
T ss_pred ecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhc
Confidence 3499999999999999999999999999999999999999999532 68999
Q ss_pred cChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHH
Q 038599 280 LLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 280 ~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~ 351 (473)
++|++|..+|+.||+.| .|+|+|||.||++||++|||||+++ ++++.++++||+++++++|+.++.+|++|
T Consensus 97 ~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 97 VEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999 8999999999999999999999998 89999999999999999999999999986
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.77 E-value=1.1e-21 Score=198.40 Aligned_cols=259 Identities=15% Similarity=0.047 Sum_probs=166.3
Q ss_pred chHhhhhcCccEEEEcCCCcCCCCceEEEEEEecC-------CCC-CHHHHHHHH-----HhhhccCCChHHHHHHHHHH
Q 038599 88 GDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC-------DDV-SLGTLLYWV-----SSIESKSSHPMAAALVDYAR 154 (473)
Q Consensus 88 ~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~-------~~~-~~~~ll~~~-----a~~e~~s~hpi~~Ai~~~a~ 154 (473)
..+.|.||...++|+|||||+|.++|++..+.... .+. +..+++... +......++|...+++...+
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDE 109 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCSS
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHh
Confidence 45569999999999999999999999875432110 001 112232222 22334556676666665422
Q ss_pred HcCCCC--CCCCccccccccCCcee---EEec-C-----eEEEEccccccC---CCCCCcchhHHHHhcCCceeeEeee-
Q 038599 155 SLAIEP--VPENVEDFQNFPGEGIF---GKIH-G-----NVIYIGNRRIGP---RTGCSKDSIAEAKCTGGKTRGYVYL- 219 (473)
Q Consensus 155 ~~~~~~--~~~~v~~~~~~~g~gv~---~~v~-g-----~~~~iG~~~~~~---~~~~~~~~~~~~~~~~G~~vi~va~- 219 (473)
..+... ..........+|-.... .... . ..+..|.++.+. ...........++.+++++++++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~a~~~~r~l~~~~~ 189 (380)
T d1qyia_ 110 PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSK 189 (380)
T ss_dssp CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTCSCCGGGSTTCHHHHHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcCCcHHHHHHHHhHHHHHHHHHHHHHHHhhh
Confidence 110000 00000001111111000 0000 0 000111121111 1111112335667778888877753
Q ss_pred -----------CCeEEEEEEecCccCC--chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------
Q 038599 220 -----------GATPVGTFSLSDSCRS--GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------ 274 (473)
Q Consensus 220 -----------d~~~lG~i~l~d~lr~--~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------ 274 (473)
+....|++..++++|| ++++++++||++|+++.|+|||+..++..+++++|+...
T Consensus 190 ~~~~~~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~ 269 (380)
T d1qyia_ 190 LYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDV 269 (380)
T ss_dssp HHHHHHCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHH
T ss_pred cccccccccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchh
Confidence 2345688888898766 999999999999999999999999999999999998631
Q ss_pred ------------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCC---eeEEeCCCCCc
Q 038599 275 ------------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVD---IGISMGISGSA 326 (473)
Q Consensus 275 ------------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Ad---vgIa~g~~~~~ 326 (473)
..+.+.+|++|..+++.++..+ .|+|||||.||++|+++|| |||+||..+++
T Consensus 270 ~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~ 349 (380)
T d1qyia_ 270 LEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKD 349 (380)
T ss_dssp HHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGG
T ss_pred hhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcc
Confidence 1245667999999999999998 9999999999999999999 89999977776
Q ss_pred cccc----cccEEEecCCcccHHHHH
Q 038599 327 LAME----SGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 327 ~a~~----~ad~vl~~~~l~~l~~~i 348 (473)
...+ .||+++ +++..++.++
T Consensus 350 ~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 350 AAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp GHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred cHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 5544 799999 8898887765
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.48 E-value=9.2e-14 Score=115.12 Aligned_cols=108 Identities=27% Similarity=0.316 Sum_probs=94.5
Q ss_pred EEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCCCCCCccccccccCCceeEEecCeEEEEcccccc
Q 038599 114 TVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIG 193 (473)
Q Consensus 114 ~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~ 193 (473)
+|.++.+.+ .+++++|.+++++|..|+||+++||+++++++++.. ..+.+|+.++|+|+++ +.+.+|+++++
T Consensus 1 eVt~i~~~~--~~e~elL~~aaslE~~S~HPlA~AIv~~a~~~~~~~--~~~~~~~~~~G~Gi~g----~~v~vG~~~~~ 72 (113)
T d2b8ea2 1 EVTDLVPLN--GDERELLRLAAIAERRSEHPIAEAIVKKALEHGIEL--GEPEKVEVIAGEGVVA----DGILVGNKRLM 72 (113)
T ss_dssp EEEEEEESS--SCHHHHHHHHHHHTTTCCSHHHHHHHHHHHTTTCCC--CCCSCEEEETTTEEEE----TTEEEECHHHH
T ss_pred CceEEEecC--CCHHHHHHHHHHHHCcCCCchHHHHHHHHHHhcCCC--CccccceeeccceEEe----EEEEECcHHHH
Confidence 477888774 378999999999999999999999999999988765 5788999999999986 46999999999
Q ss_pred CCCCCCcch----hHHHHhcCCceeeEeeeCCeEEEEEEe
Q 038599 194 PRTGCSKDS----IAEAKCTGGKTRGYVYLGATPVGTFSL 229 (473)
Q Consensus 194 ~~~~~~~~~----~~~~~~~~G~~vi~va~d~~~lG~i~l 229 (473)
.+.++..++ ....+.++|+++++++.|+.++|+|.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~G~T~v~va~d~~~~G~ial 112 (113)
T d2b8ea2 73 EDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAV 112 (113)
T ss_dssp HHTTCCCCHHHHHHHHHHHTTTCEEEEEEETTEEEEEEEE
T ss_pred HhcCCCCCHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEE
Confidence 988877654 357788899999999999999999986
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=99.37 E-value=1.7e-12 Score=111.08 Aligned_cols=120 Identities=16% Similarity=0.065 Sum_probs=91.8
Q ss_pred EEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCC-CCCCcccccccc---CC-ceeEEecCeEEEEc
Q 038599 114 TVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEP-VPENVEDFQNFP---GE-GIFGKIHGNVIYIG 188 (473)
Q Consensus 114 ~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~-~~~~v~~~~~~~---g~-gv~~~v~g~~~~iG 188 (473)
+|+++++. ++.++++++.+++++|..|+||+++||++|+++++... ......+...++ .. +....++|+.+.+|
T Consensus 3 q~td~ip~-~G~~~~ell~~AA~aE~~SeHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~G 81 (136)
T d2a29a1 3 QASEFIPA-QGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKG 81 (136)
T ss_dssp EEEEEEEC-TTCCHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEEETTEEEEEE
T ss_pred CcceEEeC-CCCCHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCccccccccccccccccccceEEEEECCEEEEec
Confidence 47899998 78999999999999999999999999999999875432 122233332222 22 33446799999999
Q ss_pred cccc----cCCCCCCcch----hHHHHhcCCceeeEeeeCCeEEEEEEecCccC
Q 038599 189 NRRI----GPRTGCSKDS----IAEAKCTGGKTRGYVYLGATPVGTFSLSDSCR 234 (473)
Q Consensus 189 ~~~~----~~~~~~~~~~----~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr 234 (473)
++++ +.+.+...++ ..+++..+|+|+++++.|++++|+|.+.|++|
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 82 SVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK 135 (136)
T ss_dssp CHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETTEEEEEEEEEESSC
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECCEEEEEEEEEeecC
Confidence 9744 4444544433 35678899999999999999999999999987
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.23 E-value=1.7e-11 Score=112.10 Aligned_cols=135 Identities=20% Similarity=0.117 Sum_probs=106.3
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------ 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------ 274 (473)
+.+++-.|++++- =...+.+.+.+++++|+++|++++++||++...+..+.+.+++...
T Consensus 3 K~i~~D~DGTL~~---~~~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~ 79 (230)
T d1wr8a_ 3 KAISIDIDGTITY---PNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFL 79 (230)
T ss_dssp CEEEEESTTTTBC---TTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEES
T ss_pred eEEEEecCCCCcC---CCCccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeecccccccc
Confidence 4566667887631 1224778899999999999999999999999999999998888642
Q ss_pred -------------------------------------------------------------ceehcc--ChhhHHHHHHH
Q 038599 275 -------------------------------------------------------------MVYAEL--LPQHKEELVEL 291 (473)
Q Consensus 275 -------------------------------------------------------------~v~a~~--~P~~K~~~v~~ 291 (473)
..+-+. ....|...++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~ 159 (230)
T d1wr8a_ 80 ASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEK 159 (230)
T ss_dssp CCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHH
T ss_pred ccccHHHHHHHHHHHhcccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcc
Confidence 001111 23477777777
Q ss_pred HhhC----C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHH
Q 038599 292 LKKD----G-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 292 l~~~----g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~ 351 (473)
+.++ . .++++|||.||.+|++.|++||+|+ ++.+..++.||+|+.+++..++.++++..
T Consensus 160 l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 160 ASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp HHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cccccccchhheeeeecCccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 6543 2 6999999999999999999999998 88999999999999888888888776643
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.17 E-value=4.8e-11 Score=106.35 Aligned_cols=125 Identities=22% Similarity=0.256 Sum_probs=96.2
Q ss_pred EeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC
Q 038599 216 YVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD 295 (473)
Q Consensus 216 ~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~ 295 (473)
++..|+..+-.|...|. .+|+.|++.|+.+.++||+....+...++++++. .++.... +|...++.+.++
T Consensus 22 ~~~~dG~e~k~F~~~Dg------~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~--~~~~~~~--~K~~~l~~~~~~ 91 (177)
T d1k1ea_ 22 HYDANGEAIKSFHVRDG------LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFLGKL--EKETACFDLMKQ 91 (177)
T ss_dssp EEETTEEEEEEEEHHHH------HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEESCS--CHHHHHHHHHHH
T ss_pred EEeCCCCEEEEEECcch------HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccc--ccccccc--cHHHHHHHHHHH
Confidence 34445555544554443 4799999999999999999999999999999997 6665544 555555554332
Q ss_pred ----C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCC----cccHHHHHHHH
Q 038599 296 ----G-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSND----IRKIPKAIKLA 351 (473)
Q Consensus 296 ----g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~----l~~l~~~i~~~ 351 (473)
. .|+|+||+.||.++|+.|++|++++ ++.+.+++.||+|+..+. +..+.+.+..+
T Consensus 92 ~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~ 155 (177)
T d1k1ea_ 92 AGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQA 155 (177)
T ss_dssp HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHH
T ss_pred hcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHHHHHHHH
Confidence 2 7999999999999999999999998 999999999999998776 44444444333
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=2e-11 Score=112.34 Aligned_cols=111 Identities=20% Similarity=0.295 Sum_probs=90.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-------------------cChhhHHHHHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-------------------LLPQHKEELVELL 292 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-------------------~~P~~K~~~v~~l 292 (473)
.++|++.+.+++||++|++++++||.....+..+++.+|++...++++ ..+..|.++++.+
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~ 161 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLL 161 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHHH
Confidence 468999999999999999999999999999999999999975433321 2356799999999
Q ss_pred hhC-C--cEEEEcCCcccHHHHHHCCeeEEeCCC-CCccccccccEEEecCCcccH
Q 038599 293 KKD-G--ATAMVGDGINDAPALAAVDIGISMGIS-GSALAMESGHVILMSNDIRKI 344 (473)
Q Consensus 293 ~~~-g--~v~mvGDG~ND~~al~~AdvgIa~g~~-~~~~a~~~ad~vl~~~~l~~l 344 (473)
+++ + .+.|+|||.||.+|++.||++++++.. .....++.+|.++ ++|..+
T Consensus 162 ~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i--~~f~el 215 (217)
T d1nnla_ 162 KEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVEL 215 (217)
T ss_dssp HHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGG
T ss_pred HhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEe--CCHHHh
Confidence 765 3 699999999999999999999999622 2244456789888 556543
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.12 E-value=1e-10 Score=107.46 Aligned_cols=132 Identities=14% Similarity=0.079 Sum_probs=105.1
Q ss_pred eeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------------
Q 038599 214 RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------- 274 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------- 274 (473)
.+++-.|++++. -...+.+++.+++++|++.|++++++||++...+..+.+.+|+...
T Consensus 5 li~~D~DGTL~~---~~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~ 81 (225)
T d1l6ra_ 5 LAAIDVDGNLTD---RDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKF 81 (225)
T ss_dssp EEEEEHHHHSBC---TTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEES
T ss_pred EEEEecCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEe
Confidence 444555666531 2345678999999999999999999999999999999999988653
Q ss_pred ----------------------------------------------------------ceehccC--hhhHHHHHHHHhh
Q 038599 275 ----------------------------------------------------------MVYAELL--PQHKEELVELLKK 294 (473)
Q Consensus 275 ----------------------------------------------------------~v~a~~~--P~~K~~~v~~l~~ 294 (473)
....+.. ..+|...++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~ 161 (225)
T d1l6ra_ 82 FSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKE 161 (225)
T ss_dssp SCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhh
Confidence 0011112 2488888887754
Q ss_pred C-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 295 D-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 295 ~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+ | .|+++|||.||.+|++.|++||+|+ ++.+..++.||+++..++..++.++++
T Consensus 162 ~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~ 220 (225)
T d1l6ra_ 162 MYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK 220 (225)
T ss_dssp HTTCCGGGEEEECCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred hhccchhheeeecCCcchHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHH
Confidence 3 3 5999999999999999999999998 889999999999999998888888775
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.07 E-value=1.6e-10 Score=109.47 Aligned_cols=65 Identities=28% Similarity=0.424 Sum_probs=57.2
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+|...++.+.++ | .|+++|||.||.+||+.|+.|++|+ ++.+..++.||+++.+++-.++.++++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 798888888654 3 6999999999999999999999998 899999999999998777777877764
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.07 E-value=1.3e-10 Score=109.31 Aligned_cols=133 Identities=17% Similarity=0.181 Sum_probs=106.5
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------ 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------ 274 (473)
+.++.-.|++++. =...+.+++.+++++|+++|++++++||.+...+..+.+++++...
T Consensus 5 Kli~~DlDGTL~~---~~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~ 81 (271)
T d1rkqa_ 5 KLIAIDMDGTLLL---PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADG 81 (271)
T ss_dssp CEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCccccC---CCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCC
Confidence 4456667887743 2334678899999999999999999999999999999999987642
Q ss_pred --------------------------------------------------------------------------------
Q 038599 275 -------------------------------------------------------------------------------- 274 (473)
Q Consensus 275 -------------------------------------------------------------------------------- 274 (473)
T Consensus 82 ~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (271)
T d1rkqa_ 82 STVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEP 161 (271)
T ss_dssp CEEEECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCH
T ss_pred eEEEeecccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCH
Confidence
Q ss_pred ------------------------ceehccChh--hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCC
Q 038599 275 ------------------------MVYAELLPQ--HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGIS 323 (473)
Q Consensus 275 ------------------------~v~a~~~P~--~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~ 323 (473)
..+-+..|. +|...++.+.++ + .++++|||.||.+|++.|+.|++|+ +
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-n 240 (271)
T d1rkqa_ 162 AILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-N 240 (271)
T ss_dssp HHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-T
T ss_pred HHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-C
Confidence 011222343 699999988765 2 6999999999999999999999998 8
Q ss_pred CCccccccccEEEecCCcccHHHHHH
Q 038599 324 GSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 324 ~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+.+..++.|++++.+++=.++.++++
T Consensus 241 a~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 241 AIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp SCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 99999999999998777677777665
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=9.7e-11 Score=110.31 Aligned_cols=131 Identities=18% Similarity=0.195 Sum_probs=103.8
Q ss_pred eeEeeeCCeEEEEEEecCc--cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------
Q 038599 214 RGYVYLGATPVGTFSLSDS--CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD----------------- 274 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~--lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~----------------- 274 (473)
.++.-.||+++. .+. ..|.+.++|++|+++|+.++++||.+...+..+.++++....
T Consensus 4 li~~DlDGTLl~----~~~~~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~ 79 (269)
T d1rlma_ 4 VIVTDMDGTFLN----DAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLF 79 (269)
T ss_dssp EEEECCCCCCSC----TTSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEE
T ss_pred EEEEeCCccCcC----CCCcCChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEE
Confidence 455566777642 222 246789999999999999999999999999888888887531
Q ss_pred --------------------------------------------------------------------------------
Q 038599 275 -------------------------------------------------------------------------------- 274 (473)
Q Consensus 275 -------------------------------------------------------------------------------- 274 (473)
T Consensus 80 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (269)
T d1rlma_ 80 HGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPL 159 (269)
T ss_dssp ECCCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHH
T ss_pred EeccchHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHHHHHH
Confidence
Q ss_pred -------------------ceehccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccc
Q 038599 275 -------------------MVYAELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALA 328 (473)
Q Consensus 275 -------------------~v~a~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a 328 (473)
..+-+.+| .+|...++.|.++ | .|+++|||.||.+||+.|+.|++|+ ++.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~l 238 (269)
T d1rlma_ 160 VIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENI 238 (269)
T ss_dssp HHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHH
T ss_pred HHHHHHHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHH
Confidence 00112234 3699999888654 3 5999999999999999999999998 899999
Q ss_pred cccccEEEecCCcccHHHHHH
Q 038599 329 MESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 329 ~~~ad~vl~~~~l~~l~~~i~ 349 (473)
++.|++|+.+++-.++.+.++
T Consensus 239 k~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 239 KQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp HHHCSEECCCGGGTHHHHHHH
T ss_pred HHhCCEEcCCCCccHHHHHHH
Confidence 999999998888888887775
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.98 E-value=2.1e-10 Score=105.01 Aligned_cols=118 Identities=15% Similarity=0.152 Sum_probs=93.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcccee-----------------------hccChhhHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVY-----------------------AELLPQHKEEL 288 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~-----------------------a~~~P~~K~~~ 288 (473)
+++|++.+.++.|++.|++++++|+.....+..+.+++|+.. .++ ....|+.|..+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~-~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 153 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKD-RIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV 153 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGG-GEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCcc-ceeeeeEEEeCCcceeccccccccccccCCHHHHHHH
Confidence 478999999999999999999999999999999999999863 222 23467889999
Q ss_pred HHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccc-cccccEEEecCCcccHHHHHHHHH
Q 038599 289 VELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALA-MESGHVILMSNDIRKIPKAIKLAR 352 (473)
Q Consensus 289 v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a-~~~ad~vl~~~~l~~l~~~i~~~r 352 (473)
++.++..+ .|+|+||+.||.+|+++||++++++ ...+.. .+..+++. -+|++.+...++.-.
T Consensus 154 ~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~ 217 (226)
T d2feaa1 154 IHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVK 217 (226)
T ss_dssp HHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSH
T ss_pred HHHhcCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeee-cCCHHHHHHHHHHHH
Confidence 99998887 8999999999999999999999986 333333 33344333 367877776665433
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.90 E-value=1.1e-09 Score=98.02 Aligned_cols=115 Identities=25% Similarity=0.354 Sum_probs=90.9
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc-----------------ChhhHHHHHHHH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL-----------------LPQHKEELVELL 292 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~-----------------~P~~K~~~v~~l 292 (473)
..++.+++.+.++.++..|..++++||.....+....++.++.. ++... .+..|...+..+
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY--AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI 150 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE--EEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhh--hhhhhhccccccccccccccccccccccchhhhH
Confidence 34678899999999999999999999999999999999998873 22111 123344444333
Q ss_pred ----hhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHH
Q 038599 293 ----KKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 293 ----~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
+-.. .++++|||.||.+|++.||+||+| ++.+..++.||+++.++|+.+|.+++
T Consensus 151 ~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 151 AKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred HHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 3333 799999999999999999999999 57888889999999888888877654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.87 E-value=1.3e-09 Score=102.60 Aligned_cols=137 Identities=18% Similarity=0.145 Sum_probs=100.0
Q ss_pred CCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---------------
Q 038599 210 GGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--------------- 274 (473)
Q Consensus 210 ~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--------------- 274 (473)
...++++.-.||+++- .=.-.+.+.+.++|++|+++|++++++||.+...+..+.+++++...
T Consensus 8 ~~ikli~~DlDGTLl~--~~~~~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~~~ 85 (283)
T d2b30a1 8 ADIKLLLIDFDGTLFV--DKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIV 85 (283)
T ss_dssp CCCCEEEEETBTTTBC--CTTTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEE
T ss_pred cCccEEEEECCCCCcC--CCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEeeeEE
Confidence 3346778888998741 00124678899999999999999999999999999888877653200
Q ss_pred ------------------------------------------------------------------------------ce
Q 038599 275 ------------------------------------------------------------------------------MV 276 (473)
Q Consensus 275 ------------------------------------------------------------------------------~v 276 (473)
.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (283)
T d2b30a1 86 YDQIGYTLLDETIETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKL 165 (283)
T ss_dssp ECTTCCEEEECCCCHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEE
T ss_pred EcCCCcEeeecccCHHHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccHHHHhhcccceEE
Confidence 00
Q ss_pred --------------------------------ehccCh--hhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHHCCee
Q 038599 277 --------------------------------YAELLP--QHKEELVELLKKD----G-ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 277 --------------------------------~a~~~P--~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~Advg 317 (473)
+-+..| ..|...++.+.+. . .|+++|||.||.+||+.||+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~ 245 (283)
T d2b30a1 166 MIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS 245 (283)
T ss_dssp EECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE
T ss_pred EEecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcE
Confidence 000111 2677666666543 2 799999999999999999999
Q ss_pred EEeCCCCCccccccccEEEecCCccc-HHHHHH
Q 038599 318 ISMGISGSALAMESGHVILMSNDIRK-IPKAIK 349 (473)
Q Consensus 318 Ia~g~~~~~~a~~~ad~vl~~~~l~~-l~~~i~ 349 (473)
++|+ ++.+.+++.||+++..++-.+ +.++++
T Consensus 246 va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 246 FAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp EECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred EEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 9998 899999999999996655444 555543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.85 E-value=1.8e-09 Score=101.57 Aligned_cols=65 Identities=14% Similarity=0.294 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+|...++.|.++ | .|+++|||.||.+||+.|++|++|+ ++.+.+++.||+++.+++-.++.++++
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 688888877654 2 6999999999999999999999998 999999999999998888888887764
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.81 E-value=1.2e-08 Score=93.49 Aligned_cols=56 Identities=16% Similarity=0.212 Sum_probs=48.4
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF 273 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~ 273 (473)
+.+++-.||+++ .+...+.++++|++|+++|+.++++||.+...+..+.+++++..
T Consensus 3 Kli~~DlDGTLl-----~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 3 RLIFLDIDKTLI-----PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp EEEEECCBTTTB-----SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred EEEEEeCCCCCC-----CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 356666788874 56667889999999999999999999999999999999999875
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.78 E-value=1.9e-09 Score=101.05 Aligned_cols=65 Identities=28% Similarity=0.389 Sum_probs=57.3
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.|...++.|.++ | .++++|||.||.+||+.|+.|++|+ ++.+..++.||+|..+++-.++.++++
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~ 255 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMK 255 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHH
Confidence 798888888654 2 7999999999999999999999998 899999999999988877788888775
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.78 E-value=9.1e-09 Score=91.60 Aligned_cols=116 Identities=17% Similarity=0.098 Sum_probs=89.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------ceehccChhhHHHHHHHHhhCC-c
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------------MVYAELLPQHKEELVELLKKDG-A 297 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------~v~a~~~P~~K~~~v~~l~~~g-~ 297 (473)
+..++....++.+ +.+.+.+++|+.............++... .......+..+...++.++... .
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e 147 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR 147 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcccccc
Confidence 4466677777665 47889999999999999999999998732 1122334566777788887776 8
Q ss_pred EEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHH
Q 038599 298 TAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 298 v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
|+++|||.||.+|++.||+||||+ ...+..++++|++.. ++..++...+..
T Consensus 148 viaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 148 VIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp EEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred eEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 999999999999999999999996 666777778888764 567777765543
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.54 E-value=1.9e-07 Score=84.32 Aligned_cols=56 Identities=16% Similarity=0.121 Sum_probs=46.2
Q ss_pred eEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc
Q 038599 215 GYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF 273 (473)
Q Consensus 215 i~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~ 273 (473)
++.-.||+++. =...+.+.+++++++|+++|+.++++||.+...+..+.+++|+..
T Consensus 7 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 7 VFSDLDGTLLD---SHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp EEEECTTTTSC---SSCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred EEEECCCCccC---CcCcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 34456787752 233477899999999999999999999999999999999999864
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.49 E-value=5.3e-08 Score=89.79 Aligned_cols=129 Identities=18% Similarity=0.032 Sum_probs=93.2
Q ss_pred eEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--------------------
Q 038599 215 GYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------------------- 274 (473)
Q Consensus 215 i~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------------- 274 (473)
++.-.|++++ .+.-.++..+.+.++++.|+.++++||.+...+..+.+++++...
T Consensus 6 i~~DlDGTL~-----~~~~~~~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~ 80 (244)
T d1s2oa1 6 LISDLDNTWV-----GDQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQH 80 (244)
T ss_dssp EEECTBTTTB-----SCHHHHHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHH
T ss_pred EEEECcccCC-----CCCCCHHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchH
Confidence 3345677763 233333445566667888999999999999999999999998532
Q ss_pred ------------------------------------------------------------------------ceehccCh
Q 038599 275 ------------------------------------------------------------------------MVYAELLP 282 (473)
Q Consensus 275 ------------------------------------------------------------------------~v~a~~~P 282 (473)
.+.--...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 160 (244)
T d1s2oa1 81 WADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQR 160 (244)
T ss_dssp HHHHHHTTCCHHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETT
T ss_pred HHHHHHHHHhHHHHHHHHhhcccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCc
Confidence 00000124
Q ss_pred hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccccccc-------EEEecCCcccHHHHHH
Q 038599 283 QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGH-------VILMSNDIRKIPKAIK 349 (473)
Q Consensus 283 ~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad-------~vl~~~~l~~l~~~i~ 349 (473)
.+|...++.+.+. | .++++|||.||.+||+.++.|++|+ ++.+..++.|| ++...++..++.++++
T Consensus 161 ~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred cchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 5799999988765 3 5999999999999999999999998 88888887777 4554445555555543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.25 E-value=1.9e-06 Score=77.18 Aligned_cols=113 Identities=16% Similarity=0.127 Sum_probs=84.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-----------cChhhHHHHHHHHhhCC-cEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-----------LLPQHKEELVELLKKDG-ATA 299 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-----------~~P~~K~~~v~~l~~~g-~v~ 299 (473)
.+.|++.+.++.|++.|+++.++|+.....+..+.+++|+. .+|.. ..|+--..+.+.++-.. .++
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~ 172 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID--HLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQIL 172 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG--GGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCch--hhccccccccccccccccchhhHHHHHHhhhhhhccc
Confidence 45799999999999999999999999999999999999997 33221 12344444555555444 899
Q ss_pred EEcCCcccHHHHHHCCe-eEEeC--CC-CCccccccccEEEecCCcccHHHHH
Q 038599 300 MVGDGINDAPALAAVDI-GISMG--IS-GSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 300 mvGDG~ND~~al~~Adv-gIa~g--~~-~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
||||..+|..+-+.|++ .|.+. .. ..+.....+|+++ +++..+++++
T Consensus 173 ~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 173 FVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 99999999999999997 44442 11 2234455689998 7888887654
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.25 E-value=2.3e-06 Score=77.48 Aligned_cols=116 Identities=15% Similarity=0.155 Sum_probs=82.5
Q ss_pred ccCCchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCcc--c-eehc--cChhhH----HHHHHHHhhC---C-c
Q 038599 232 SCRSGALEAIKDLKSLG-IKSFILAGDSHAAALYAQDQLDHAFD--M-VYAE--LLPQHK----EELVELLKKD---G-A 297 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~g-i~v~mlTGD~~~~a~~~a~~~gi~~~--~-v~a~--~~P~~K----~~~v~~l~~~---g-~ 297 (473)
++.|++.+.+++|++.| +++.++|+.....+..+.+++|+..- . +.++ ..+..+ ...++.+... . .
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~ 170 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQ 170 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGG
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccCCChhH
Confidence 34689999999999987 88999999999999999999999721 1 2221 112222 2233444322 2 7
Q ss_pred EEEEcCCcccHHHHHHCCe---eEEeCCCCCc-cccccccEEEecCCcccHHHHHH
Q 038599 298 TAMVGDGINDAPALAAVDI---GISMGISGSA-LAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 298 v~mvGDG~ND~~al~~Adv---gIa~g~~~~~-~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
++||||+.+|..+.+.|++ +|+.|....+ .....+|+++ ++++.+++++.
T Consensus 171 ~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 171 IVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp EEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred heeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 9999999999999999996 4444422222 2344689999 88999998875
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.14 E-value=9.1e-07 Score=79.50 Aligned_cols=63 Identities=17% Similarity=0.305 Sum_probs=46.7
Q ss_pred hhHHHHHHHHhhCCcEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHH
Q 038599 283 QHKEELVELLKKDGATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 283 ~~K~~~v~~l~~~g~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
-+|...++.|.++..++++||+.||.+|++.++.|+++. .|. .+..|++.+ ++...+..+++.
T Consensus 158 ~~Kg~al~~l~~~~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~--~~~~ev~~~l~~ 220 (229)
T d1u02a_ 158 VNKGSAIRSVRGERPAIIAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHV--ADYIEMRKILKF 220 (229)
T ss_dssp CCHHHHHHHHHTTSCEEEEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEE--SSHHHHHHHHHH
T ss_pred CCHHHHHHHHhccccceeecCCCChHHHHhccCCeEEEE-eCC--CCccCeEEc--CCHHHHHHHHHH
Confidence 379999999988778899999999999999996665553 222 135788888 556665555543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=98.10 E-value=5.5e-06 Score=74.10 Aligned_cols=111 Identities=17% Similarity=0.105 Sum_probs=79.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-c------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-E------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+.. +.+++ + ..|+-=..+++.+.-.. .++||
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i 167 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 167 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEE
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEEE
Confidence 457999999999999999999999999999999999999972 11211 1 12233344455554444 79999
Q ss_pred cCCcccHHHHHHCCee-EEeC--CCCCccccccccEEEecCCcccH
Q 038599 302 GDGINDAPALAAVDIG-ISMG--ISGSALAMESGHVILMSNDIRKI 344 (473)
Q Consensus 302 GDG~ND~~al~~Advg-Ia~g--~~~~~~a~~~ad~vl~~~~l~~l 344 (473)
||..+|..+.+.+++. |.+. ....+.....+|.++ +++..+
T Consensus 168 gD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~el 211 (218)
T d1te2a_ 168 EDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTEL 211 (218)
T ss_dssp ESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGC
T ss_pred eeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhhC
Confidence 9999999999999983 3332 112233345688887 777765
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=98.09 E-value=8.9e-06 Score=74.82 Aligned_cols=117 Identities=16% Similarity=0.139 Sum_probs=85.1
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---cce-ehc------cChhhHHHHHHHHhhC-C-cE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMV-YAE------LLPQHKEELVELLKKD-G-AT 298 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v-~a~------~~P~~K~~~v~~l~~~-g-~v 298 (473)
..+.|++.++++.|++.|+++.++||.+......+.+++|+.. +.+ .++ ..|+.=...++.+.-. . .+
T Consensus 98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~ 177 (257)
T d1swva_ 98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHM 177 (257)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGE
T ss_pred CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcceE
Confidence 3578999999999999999999999999999999999888752 111 111 1233345555666543 2 69
Q ss_pred EEEcCCcccHHHHHHCCe-eEEeCCCCCc---------------------------cccccccEEEecCCcccHHHHHHH
Q 038599 299 AMVGDGINDAPALAAVDI-GISMGISGSA---------------------------LAMESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 299 ~mvGDG~ND~~al~~Adv-gIa~g~~~~~---------------------------~a~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
+||||..+|..+-+.|++ .|.+. .|.. .....||+++ +++..|+.+++.
T Consensus 178 v~VgDs~~Di~aA~~aG~~ti~v~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi--~~l~eL~~ii~~ 254 (257)
T d1swva_ 178 IKVGDTVSDMKEGRNAGMWTVGVI-LGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI--ETMQELESVMEH 254 (257)
T ss_dssp EEEESSHHHHHHHHHTTSEEEEEC-TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHHH
T ss_pred EEEeCChhhHHHHHHCCCEEEEEc-cCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEE--CCHHHHHHHHHH
Confidence 999999999999999997 33342 2321 0111389999 889999998864
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.00 E-value=1.7e-07 Score=95.56 Aligned_cols=68 Identities=9% Similarity=0.009 Sum_probs=61.0
Q ss_pred HHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCC--CcCCC
Q 038599 33 SLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKT--GTVTR 110 (473)
Q Consensus 33 ~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKT--GTLT~ 110 (473)
.+++++++++.+|++||...|+ +++.|++||+|+|++||++.++|++|+..+.|.||| +|||.
T Consensus 181 ~~~ai~l~V~~iPEgLp~~vti---------------~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~ 245 (472)
T d1wpga4 181 FKIAVALAVAAIPEGLPAVITT---------------CLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISS 245 (472)
T ss_dssp HHHHHHHHHHHSCTTHHHHHHH---------------HHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhChhhHHHHHHH---------------HHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhh
Confidence 3566778889999999988887 999999999999999999999999999999999998 88888
Q ss_pred CceEE
Q 038599 111 GEFTV 115 (473)
Q Consensus 111 g~~~V 115 (473)
|-+++
T Consensus 246 n~~~v 250 (472)
T d1wpga4 246 NVGEV 250 (472)
T ss_dssp HHHHH
T ss_pred hHHHH
Confidence 75544
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.94 E-value=4e-07 Score=82.28 Aligned_cols=52 Identities=21% Similarity=0.286 Sum_probs=43.6
Q ss_pred hHHHHHHHHhhCC--cEEEEcC----CcccHHHHHHCC-eeEEeCCCCCccccccccEEE
Q 038599 284 HKEELVELLKKDG--ATAMVGD----GINDAPALAAVD-IGISMGISGSALAMESGHVIL 336 (473)
Q Consensus 284 ~K~~~v~~l~~~g--~v~mvGD----G~ND~~al~~Ad-vgIa~g~~~~~~a~~~ad~vl 336 (473)
+|...++.|.+.. .|+++|| |.||.+|++.|+ .|++++ ++.+..+..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 8888999987765 7999999 569999999997 699998 77777777777654
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.82 E-value=7.2e-05 Score=65.42 Aligned_cols=114 Identities=26% Similarity=0.428 Sum_probs=77.7
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHH---------------HHHHHHHcCCCcccee-------------------h
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAA---------------ALYAQDQLDHAFDMVY-------------------A 278 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~---------------a~~~a~~~gi~~~~v~-------------------a 278 (473)
+-|++.+++++|+++|++++++|..+... ........|+....++ .
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~r 107 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCR 107 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSS
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeeccccccccccccccccccc
Confidence 45799999999999999999999876321 1122333444322111 2
Q ss_pred ccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCee--EEeCCCC---CccccccccEEEecCCcccHHHHHH
Q 038599 279 ELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIG--ISMGISG---SALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 279 ~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Advg--Ia~g~~~---~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
...|+--..+++.+.-.. .+.||||..+|..|-++|+++ +.+. .+ .+.....||+++ +++.+++++++
T Consensus 108 KP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~-~g~~~~~~~~~~ad~v~--~~l~dl~~~ik 181 (182)
T d2gmwa1 108 KPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVR-TGKPITPEAENAADWVL--NSLADLPQAIK 181 (182)
T ss_dssp TTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEES-SSSCCCHHHHHHCSEEE--SCGGGHHHHHH
T ss_pred CCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEEC-CCCCCCcccccCCCEEE--CCHHHHHHHhc
Confidence 333455556666666544 799999999999999999984 3332 22 233445699999 88999998876
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.77 E-value=1.8e-05 Score=70.19 Aligned_cols=115 Identities=11% Similarity=0.094 Sum_probs=79.8
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-hccC----hhhHHHHHHHHhhCC-cEEEEc
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-AELL----PQHKEELVELLKKDG-ATAMVG 302 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~~~----P~~K~~~v~~l~~~g-~v~mvG 302 (473)
.++.+++.+.++.|+..+ ++.++|+.....++.+.+++|+..- .++ +.-. |+-...+++.++-.. .++|||
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VG 161 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIG 161 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccccccccccccccccccchhhhhhhcccccceeec
Confidence 356789999999999775 8899999999999999999998731 111 2222 333333333333333 799999
Q ss_pred CCcccHHHHHHCCe-eEEe--CCCCC-ccccccccEEEecCCcccHHHHH
Q 038599 303 DGINDAPALAAVDI-GISM--GISGS-ALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 303 DG~ND~~al~~Adv-gIa~--g~~~~-~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
|+.+|..+.++|++ .|.+ |.... +.....+|+++ +++..+...+
T Consensus 162 Ds~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~l 209 (210)
T d2ah5a1 162 DTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAYF 209 (210)
T ss_dssp SSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHHT
T ss_pred CCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHHh
Confidence 99999999999998 4444 31222 23334589998 7788877653
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.68 E-value=9.7e-05 Score=66.27 Aligned_cols=112 Identities=11% Similarity=0.121 Sum_probs=76.6
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----ce-----ehccChhhHHHHHHHHhhCC-cE
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-----MV-----YAELLPQHKEELVELLKKDG-AT 298 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-----~v-----~a~~~P~~K~~~v~~l~~~g-~v 298 (473)
.-.+.|++.+.+++|++.|+++.++|+..........+.+|+..- .. .....|+-=....+.+.-.. .+
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~ 204 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNI 204 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGE
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCcE
Confidence 345689999999999999999999999999998888898887521 01 11222333333444444434 89
Q ss_pred EEEcCCcccHHHHHHCCeeEEe----CCCCCccccccccEEEecCCccc
Q 038599 299 AMVGDGINDAPALAAVDIGISM----GISGSALAMESGHVILMSNDIRK 343 (473)
Q Consensus 299 ~mvGDG~ND~~al~~AdvgIa~----g~~~~~~a~~~ad~vl~~~~l~~ 343 (473)
+||||..+|+.+-++|++-... |..........++.++ ++|..
T Consensus 205 l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i--~sl~E 251 (253)
T d1zs9a1 205 LFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI--TSFSE 251 (253)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE--SSGGG
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEE--CChHH
Confidence 9999999999999999994433 2122222334556666 45544
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.67 E-value=0.00012 Score=65.65 Aligned_cols=116 Identities=16% Similarity=0.161 Sum_probs=80.6
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-h----ccChhh--HHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-A----ELLPQH--KEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a----~~~P~~--K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.++++.|+ .|+++.++|+........+.+.+|+.. +.++ + ...|+. =..+++.+.-.. .++||
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~v 178 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccccccccccccccchhhHHHHHHHhhhccccccccee
Confidence 46899999999997 579999999989999999999999862 1221 1 112322 223333443333 79999
Q ss_pred cCC-cccHHHHHHCCeeE-EeCC-CCCccccccccEEEecCCcccHHHHHHH
Q 038599 302 GDG-INDAPALAAVDIGI-SMGI-SGSALAMESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 302 GDG-~ND~~al~~AdvgI-a~g~-~~~~~a~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
||. .+|..+-+.+++-. .+.. .......+.+|+++ ++++.+.++++.
T Consensus 179 gD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 228 (230)
T d1x42a1 179 GDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVDE 228 (230)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHHH
T ss_pred ecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHHH
Confidence 997 68999999998832 2321 22334455789998 889999888763
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.66 E-value=8.6e-05 Score=65.35 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=74.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-------ccChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-------ELLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-------~~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.++++.|+++|+++.++|+... .+..+.+++|+.. +.+++ ...|+--..+++.+.-.. .++||
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~V 160 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYI 160 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCceEEEE
Confidence 4579999999999999999999998665 4567789999973 12221 123344444455554444 89999
Q ss_pred cCCcccHHHHHHCCee-EEeCCCCCccccccccEEEecCCcccHHHHH
Q 038599 302 GDGINDAPALAAVDIG-ISMGISGSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 302 GDG~ND~~al~~Advg-Ia~g~~~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
||+.+|..+.+.+++. |.+. .+. ..+|..+ +++.++..++
T Consensus 161 gD~~~Di~~A~~~G~~~i~v~-~~~----~~~~~~~--~~~~dl~~l~ 201 (204)
T d2go7a1 161 GDRTLDVEFAQNSGIQSINFL-EST----YEGNHRI--QALADISRIF 201 (204)
T ss_dssp ESSHHHHHHHHHHTCEEEESS-CCS----CTTEEEC--SSTTHHHHHT
T ss_pred eCCHHHHHHHHHcCCeEEEEc-CCC----CCcCeec--CCHHHHHHHh
Confidence 9999999999999984 3443 332 2345544 5566666554
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.60 E-value=2.7e-05 Score=73.61 Aligned_cols=116 Identities=16% Similarity=0.180 Sum_probs=80.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ceehcc-----------------ChhhHHHHHH--
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVYAEL-----------------LPQHKEELVE-- 290 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~a~~-----------------~P~~K~~~v~-- 290 (473)
++|+++++.++.|++.|++++++||--...+..+++++|+..+ +++++- ....|...+.
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~~ 214 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKN 214 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTT
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhhh
Confidence 4899999999999999999999999999999999999999754 244422 1234443332
Q ss_pred --HHhh--CC-cEEEEcCCcccHHHHHH---CCeeEEeCC--CCC----ccccccccEEEecCCcccHHHH
Q 038599 291 --LLKK--DG-ATAMVGDGINDAPALAA---VDIGISMGI--SGS----ALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 291 --~l~~--~g-~v~mvGDG~ND~~al~~---AdvgIa~g~--~~~----~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
.++. .. .+.++|||.||..|.+. ++..+..|- ... +.-.+.-|+|+.++.--.++..
T Consensus 215 ~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~ 285 (291)
T d2bdua1 215 TDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 285 (291)
T ss_dssp HHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred HHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHHHH
Confidence 2222 23 79999999999998764 344444432 111 1123678999988776555543
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.56 E-value=4.5e-05 Score=67.51 Aligned_cols=111 Identities=12% Similarity=0.127 Sum_probs=79.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-hc------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-AE------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++ ++++.++|+.....+..+.+++|+..- .++ +. ..|+--..+++.++-.. .++||
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~V 160 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI 160 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccccchhhhhhhcccccceeeeccceeEe
Confidence 466899999999975 799999999999999999999998731 111 11 12333355555554433 79999
Q ss_pred cCCcccHHHHHHCCeeEEe---CCCCCccccccccEEEecCCcccHHH
Q 038599 302 GDGINDAPALAAVDIGISM---GISGSALAMESGHVILMSNDIRKIPK 346 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa~---g~~~~~~a~~~ad~vl~~~~l~~l~~ 346 (473)
||..+|..+-++|++.... | ..+....+.+|.++ +++.+|.+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i--~~l~dll~ 205 (207)
T d2hdoa1 161 GDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRF--QKPLDILE 205 (207)
T ss_dssp ESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEE--SSGGGGGG
T ss_pred cCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEe--CCHHHHHh
Confidence 9999999999999986543 3 33344445678887 66766654
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.38 E-value=0.00024 Score=60.72 Aligned_cols=85 Identities=14% Similarity=0.001 Sum_probs=61.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCcc--ceehccCh--hhHHHHHHHHhhCC-cEEEEcCCc
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDS-HAAALYAQDQLDHAFD--MVYAELLP--QHKEELVELLKKDG-ATAMVGDGI 305 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~-~~~a~~~a~~~gi~~~--~v~a~~~P--~~K~~~v~~l~~~g-~v~mvGDG~ 305 (473)
.+.|++.+++++|+++|+++.++|+-+ ...+..+-+..++..- .+.....| +.-..+.+.+.-.. .++||||..
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~ 125 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDEN 125 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecccCCChHHHHHHHHHhCCChHHEEEEcCCH
Confidence 468999999999999999999999654 4667777788887621 12222223 33333444443333 799999999
Q ss_pred ccHHHHHHCCe
Q 038599 306 NDAPALAAVDI 316 (473)
Q Consensus 306 ND~~al~~Adv 316 (473)
+|..+.++|++
T Consensus 126 ~di~aA~~aG~ 136 (164)
T d1u7pa_ 126 RNIIDVGRLGV 136 (164)
T ss_dssp HHHHHHHTTTC
T ss_pred HHHHHHHHcCC
Confidence 99999999988
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.30 E-value=0.00087 Score=60.32 Aligned_cols=116 Identities=12% Similarity=0.159 Sum_probs=80.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-hccChhhH------HHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-AELLPQHK------EELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~~~P~~K------~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.++++.|++ |+++.++|+.+........++.|+..- .++ +.-.+..| ..+++.+.-.. .++||
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i 187 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV 187 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhccee
Confidence 367899999999985 899999999999999999999998621 222 22222223 33344444333 79999
Q ss_pred cCCc-ccHHHHHHCCee-EEe-CCCC--CccccccccEEEecCCcccHHHHHHH
Q 038599 302 GDGI-NDAPALAAVDIG-ISM-GISG--SALAMESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 302 GDG~-ND~~al~~Advg-Ia~-g~~~--~~~a~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
||.. +|..+-+.+++. +.. ...+ .......+|+++ +++..++.+++.
T Consensus 188 GD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~~ 239 (247)
T d2gfha1 188 GDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQS 239 (247)
T ss_dssp ESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHHH
T ss_pred ccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHHH
Confidence 9985 899999999985 432 1111 222334578888 789999988864
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.26 E-value=0.00011 Score=66.13 Aligned_cols=96 Identities=11% Similarity=-0.080 Sum_probs=60.0
Q ss_pred CCChHHHHHHHHHHHcCCCCC-----CCCccccccccCCceeEEe------cC--eEEEEccccccCCCCCC--------
Q 038599 141 SSHPMAAALVDYARSLAIEPV-----PENVEDFQNFPGEGIFGKI------HG--NVIYIGNRRIGPRTGCS-------- 199 (473)
Q Consensus 141 s~hpi~~Ai~~~a~~~~~~~~-----~~~v~~~~~~~g~gv~~~v------~g--~~~~iG~~~~~~~~~~~-------- 199 (473)
.++|.+.|++.++...+.+.. ...+..+..-..+...+.+ ++ ..+.+|+++.+.+.+..
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~ 143 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEI 143 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEE
T ss_pred ccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCcee
Confidence 579999999999987665421 1122222222222222222 12 24668998876444321
Q ss_pred ---------cchhHHHHhcCCceeeEeee------------------------CCeEEEEEEecCccCCc
Q 038599 200 ---------KDSIAEAKCTGGKTRGYVYL------------------------GATPVGTFSLSDSCRSG 236 (473)
Q Consensus 200 ---------~~~~~~~~~~~G~~vi~va~------------------------d~~~lG~i~l~d~lr~~ 236 (473)
.....++++.+|.|++++|+ |++|+|++++.||+|++
T Consensus 144 ~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 144 PLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred echHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 12236788999999999974 56899999999999985
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.25 E-value=0.00036 Score=60.54 Aligned_cols=85 Identities=18% Similarity=0.157 Sum_probs=60.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-hccChhhH---HHHHHHHhhCC--cEEEEcC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-AELLPQHK---EELVELLKKDG--ATAMVGD 303 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~~~P~~K---~~~v~~l~~~g--~v~mvGD 303 (473)
++.|++.+.+++|++.|+++.++|+-+.... ...+++|+... .++ ++..+..| ..+-..+++.+ .+.||||
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~l~vgD 157 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISSGLVIGD 157 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCSSEEEEES
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccccCCCHHHHHHHHHHcCCCCeEEEeC
Confidence 4679999999999999999999998776554 56788998731 122 22111222 22233334444 7999999
Q ss_pred CcccHHHHHHCCee
Q 038599 304 GINDAPALAAVDIG 317 (473)
Q Consensus 304 G~ND~~al~~Advg 317 (473)
..+|..+-++|++-
T Consensus 158 s~~Di~aA~~aG~~ 171 (187)
T d2fi1a1 158 RPIDIEAGQAAGLD 171 (187)
T ss_dssp SHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHcCCE
Confidence 99999999999885
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.22 E-value=1.6e-05 Score=71.38 Aligned_cols=55 Identities=7% Similarity=-0.032 Sum_probs=40.6
Q ss_pred CceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 038599 211 GKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL 269 (473)
Q Consensus 211 G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~ 269 (473)
|.+.+.+-.||+++. =...+-+.+.++|++|++.|+ ++++||.+...+.....+.
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l~~~g~-~~i~Tgr~~~~~~~~~~~~ 56 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQKIK-IGVVGGSDFEKVQEQLGND 56 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTTTSE-EEEECSSCHHHHHHHHCTT
T ss_pred CCEEEEEcCcCCeeC---CCCcCCHHHHHHHHHHHcCCC-EEEEcCCChHHhHHHHhhh
Confidence 456666778888852 244677899999999999885 7789999887776555443
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=97.08 E-value=0.00037 Score=63.63 Aligned_cols=51 Identities=6% Similarity=0.032 Sum_probs=36.0
Q ss_pred eeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 038599 214 RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ 268 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~ 268 (473)
.+.+-.||+++ - .+..=|++.++|++|++.|++++++|+....+...++++
T Consensus 4 ~v~fDlDGTL~---~-~~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~ 54 (253)
T d1yv9a1 4 GYLIDLDGTIY---L-GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQR 54 (253)
T ss_dssp EEEECCBTTTE---E-TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHH
T ss_pred EEEEcCCCccE---e-CCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence 44555677653 1 233347899999999999999999998775555555443
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=97.07 E-value=0.0011 Score=58.24 Aligned_cols=115 Identities=14% Similarity=0.025 Sum_probs=80.4
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ce-ehc------cChhhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MV-YAE------LLPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v-~a~------~~P~~K~~~v~~l~~~g-~v~m 300 (473)
..+.+++.+.++.+++.|+++.++|+-.........+..++... .+ .+. ..|+-=...++.+.-.. .++|
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~ 171 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF 171 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEE
Confidence 34578999999999999999999999999999999888887631 11 111 12333333444444333 8999
Q ss_pred EcCCcccHHHHHHCCeeEE-eCC--CCCccccccccEEEecCCcccHHHH
Q 038599 301 VGDGINDAPALAAVDIGIS-MGI--SGSALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 301 vGDG~ND~~al~~AdvgIa-~g~--~~~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
|||..+|..+-++|++--. +.. ...+.....+|.++ +++..|+++
T Consensus 172 VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~l 219 (220)
T d1zrna_ 172 VASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVEL 219 (220)
T ss_dssp EESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTT
T ss_pred EecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHhh
Confidence 9999999999999998543 421 22233345689988 778777654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=97.00 E-value=0.0015 Score=58.21 Aligned_cols=117 Identities=21% Similarity=0.137 Sum_probs=69.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCC--------HH-------HHHHHHHHcCCCccceehc-----------------
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDS--------HA-------AALYAQDQLDHAFDMVYAE----------------- 279 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~--------~~-------~a~~~a~~~gi~~~~v~a~----------------- 279 (473)
.+.|++.+++++|+++|+++.++|.-. .. .-....++.|+..+.++..
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPM 127 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTT
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccccccccccccccccc
Confidence 467899999999999999999999522 11 1122334555433333222
Q ss_pred --cChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCe-eEEeCCCCCccccccccEEE-ecCCcccHHHHHHHH
Q 038599 280 --LLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDI-GISMGISGSALAMESGHVIL-MSNDIRKIPKAIKLA 351 (473)
Q Consensus 280 --~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Adv-gIa~g~~~~~~a~~~ad~vl-~~~~l~~l~~~i~~~ 351 (473)
..|+--.+..+.+.-.. .+.||||..+|..+-+.|++ +|.+. .+..... .+... .-.++..+.+++...
T Consensus 128 rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~-~g~~~~~--~~~~~~~~~~~~e~~dll~~v 201 (209)
T d2o2xa1 128 RKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV-DGEAAVQ--PGFAIRPLRDSSELGDLLAAI 201 (209)
T ss_dssp STTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE-TCCCEEE--TTEEEEEESSHHHHHHHHHHH
T ss_pred ccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe-CCCCccc--CCccccCccchhHHHHHHHHH
Confidence 12333444455554443 79999999999999999998 55553 3332111 23322 114455555555443
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.90 E-value=0.0029 Score=56.74 Aligned_cols=115 Identities=17% Similarity=0.231 Sum_probs=86.6
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC-------------------------------
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL------------------------------- 281 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~------------------------------- 281 (473)
+-||+.++++.+++. +..+++|---.+-.+++++.+|++.+..+.+++
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 468999999999877 788888888888899999999998542222221
Q ss_pred ----------------------hhhHHHHHHHHh-hCC--cEEEEcCCcccHHHHHHC----CeeEEeCCCCCccccccc
Q 038599 282 ----------------------PQHKEELVELLK-KDG--ATAMVGDGINDAPALAAV----DIGISMGISGSALAMESG 332 (473)
Q Consensus 282 ----------------------P~~K~~~v~~l~-~~g--~v~mvGDG~ND~~al~~A----dvgIa~g~~~~~~a~~~a 332 (473)
-..|.++++..- ..+ ..++|||++.|..+|+.| ++.|+. +|.+-+...|
T Consensus 161 ~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsF--NGN~Yal~eA 238 (308)
T d1y8aa1 161 KLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALKHA 238 (308)
T ss_dssp HHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHTTC
T ss_pred HHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEe--cCcccccccc
Confidence 134555554332 224 568999999999999986 556666 7999999999
Q ss_pred cEEEecCCcccHHHHHHH
Q 038599 333 HVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 333 d~vl~~~~l~~l~~~i~~ 350 (473)
|+.+.+++...+..++++
T Consensus 239 ~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 239 DVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp SEEEECSSTHHHHHHHHH
T ss_pred ceEEeccchhHHHHHHHH
Confidence 999999988777776654
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.82 E-value=0.00043 Score=57.62 Aligned_cols=87 Identities=13% Similarity=0.073 Sum_probs=60.7
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHH-------HcCCCccceehc------cChhhHHHHHHHH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHA----AALYAQD-------QLDHAFDMVYAE------LLPQHKEELVELL 292 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~----~a~~~a~-------~~gi~~~~v~a~------~~P~~K~~~v~~l 292 (473)
++.+.|++.+.++.|+++|++++++||.+.. +...+.. ..+......+.+ -.+.-|....+.+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHh
Confidence 5678899999999999999999999998632 2222211 123321111111 1245677777777
Q ss_pred hhCC--cEEEEcCCcccHHHHHHCCe
Q 038599 293 KKDG--ATAMVGDGINDAPALAAVDI 316 (473)
Q Consensus 293 ~~~g--~v~mvGDG~ND~~al~~Adv 316 (473)
...+ .++|+||...|+.|.+++++
T Consensus 114 ~~~~~~i~~~igD~~~dv~a~~~~Gi 139 (149)
T d1ltqa1 114 IAPHFDVKLAIDDRTQVVEMWRRIGV 139 (149)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHHTTC
T ss_pred ccCCCceEEEEcCCHHHHHHHHHCCC
Confidence 6665 57889999999999999988
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.71 E-value=0.003 Score=57.46 Aligned_cols=57 Identities=14% Similarity=0.086 Sum_probs=39.9
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCC---CHHHHHHHHHHcCCC
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGD---SHAAALYAQDQLDHA 272 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD---~~~~a~~~a~~~gi~ 272 (473)
++.+.+-.||+++ - .+++=|++.+++++|+++|++++++|+. +........+++|++
T Consensus 7 ik~vlFDlDGTL~---~-~~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~ 66 (261)
T d1vjra_ 7 IELFILDMDGTFY---L-DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 66 (261)
T ss_dssp CCEEEECCBTTTE---E-TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCCeeE---E-CCccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccc
Confidence 4566677788764 2 3444489999999999999999999854 344444445566764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=96.55 E-value=0.0035 Score=56.89 Aligned_cols=45 Identities=9% Similarity=0.066 Sum_probs=32.7
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHH
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHA 260 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~ 260 (473)
|+.+.+-.||++. -.+.+=|++.++++.|++.|++++++|+....
T Consensus 2 yk~vlFDlDGTL~----~~~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~ 46 (253)
T d1wvia_ 2 YKGYLIDLDGTIY----KGKDRIPAGEDFVKRLQERQLPYILVTNNTTR 46 (253)
T ss_dssp CCEEEEECBTTTE----ETTEECHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred cCEEEEcCcCceE----ECCCcCccHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3455666677763 23334488999999999999999999975443
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.53 E-value=0.0007 Score=60.13 Aligned_cols=85 Identities=20% Similarity=0.228 Sum_probs=63.9
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHcCCCcc----ceehccC--hhhHHHHHHHHhhCCcEEEEc
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDS----HAAALYAQDQLDHAFD----MVYAELL--PQHKEELVELLKKDGATAMVG 302 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~----~~~a~~~a~~~gi~~~----~v~a~~~--P~~K~~~v~~l~~~g~v~mvG 302 (473)
+.|++.+.++.++++|++++.+||.. ..|+..+.+.+|++.. .++..-. .+.|...|+ +++.++++|
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik---~y~I~l~~G 163 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQ---DKNIRIFYG 163 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHH---HTTEEEEEE
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHH---HcCeEEEec
Confidence 46799999999999999999999975 4566777778999633 2232221 234555554 467899999
Q ss_pred CCcccHHHHHHCCe-eEEe
Q 038599 303 DGINDAPALAAVDI-GISM 320 (473)
Q Consensus 303 DG~ND~~al~~Adv-gIa~ 320 (473)
|..+|..+..+|++ +|-+
T Consensus 164 D~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 164 DSDNDITAARDVGARGIRI 182 (209)
T ss_dssp SSHHHHHHHHHTTCEEEEC
T ss_pred CCHHHHhHHHHcCCCceEe
Confidence 99999999999997 6654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.52 E-value=0.0018 Score=58.81 Aligned_cols=55 Identities=9% Similarity=0.044 Sum_probs=37.1
Q ss_pred eeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC
Q 038599 214 RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDS---HAAALYAQDQLDHA 272 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~---~~~a~~~a~~~gi~ 272 (473)
.+.+-.||+++ -.+.+=|++.++|+.|+++|++++++|+.. .....+.-+++|++
T Consensus 5 ~VifDlDGTL~----~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 5 NVICDIDGVLM----HDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp EEEEECBTTTE----ETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred EEEEECCCeeE----ECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 44556677763 234445799999999999999999998544 33333334456764
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.50 E-value=0.0043 Score=54.51 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=76.1
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc------------cChh--hHHHHHHHHhhCC
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE------------LLPQ--HKEELVELLKKDG 296 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~------------~~P~--~K~~~v~~l~~~g 296 (473)
..+.|++.+.+++|+ .+..++|+-....+..+-+++|+.. +|.. ..|+ -=....+.+.-..
T Consensus 84 ~~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~--~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p 158 (222)
T d2fdra1 84 VKIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKP--YFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSP 158 (222)
T ss_dssp CCBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGG--GTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCG
T ss_pred cchhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccc--ccceeecccccccccccccCHHHHHHHHHhhCCCC
Confidence 346788888877665 4557889999999999999999983 3211 1232 2233444444334
Q ss_pred -cEEEEcCCcccHHHHHHCCe-eEEeCCCCCc--------cccccccEEEecCCcccHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAAVDI-GISMGISGSA--------LAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~Adv-gIa~g~~~~~--------~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.++||||..+|..+-+.|++ .|.+. .+.. .....+|+++ +++..++.++.
T Consensus 159 ~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 159 DRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred ceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 79999999999999999997 34442 2211 1122489999 88999988775
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=96.19 E-value=0.02 Score=50.54 Aligned_cols=115 Identities=11% Similarity=0.093 Sum_probs=78.4
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ce-ehcc----Chhh--HHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MV-YAEL----LPQH--KEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v-~a~~----~P~~--K~~~v~~l~~~g-~v~m 300 (473)
.++.+++.+++++|+ ++.+.++|..+...+..+-+..|+... .+ .++- .|+. =...++.+.-.. .++|
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~ 169 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF 169 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence 356788999998885 678899999999889988899998631 12 2211 2332 233444444333 7999
Q ss_pred EcCCcccHHHHHHCCee-EEeCCCC-------------------------CccccccccEEEecCCcccHHHHHH
Q 038599 301 VGDGINDAPALAAVDIG-ISMGISG-------------------------SALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 301 vGDG~ND~~al~~Advg-Ia~g~~~-------------------------~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|||..+|..+-++|++- |-+...+ .+......|+++ +++..++.+++
T Consensus 170 VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 170 VSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV--PALGDLPRLVR 242 (245)
T ss_dssp EESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE--SSGGGHHHHHH
T ss_pred EeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEE--CCHHHHHHHHH
Confidence 99999999999999973 3332111 011123589999 88999999886
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=96.19 E-value=0.0049 Score=54.08 Aligned_cols=88 Identities=15% Similarity=0.174 Sum_probs=62.8
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc---------cChhh--HHHHHHHHhhCC-c
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE---------LLPQH--KEELVELLKKDG-A 297 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~---------~~P~~--K~~~v~~l~~~g-~ 297 (473)
..++.|++.+.++.|++.|+++.++|+... +....+..|+.. .|-. ..|+. =....+.+.-.. .
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~--~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~ 164 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG--YFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSE 164 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG--GCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc--ccccccccccccccccChHHHHHHHHHcCCCCce
Confidence 356788999999999999999999998765 467778888863 2211 12222 223333333333 6
Q ss_pred EEEEcCCcccHHHHHHCCe-eEEeC
Q 038599 298 TAMVGDGINDAPALAAVDI-GISMG 321 (473)
Q Consensus 298 v~mvGDG~ND~~al~~Adv-gIa~g 321 (473)
++||||..+|..+.+.|++ .|.++
T Consensus 165 ~l~VgD~~~di~~A~~aG~~~i~v~ 189 (221)
T d1o08a_ 165 SIGLEDSQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEES
T ss_pred EEEEecCHHHHHHHHHcCCEEEEEC
Confidence 9999999999999999998 55554
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.94 E-value=0.0027 Score=54.01 Aligned_cols=88 Identities=17% Similarity=0.238 Sum_probs=56.2
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCC--------HHHH-------HHHHHHcCCCccceeh------------ccChhhH
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDS--------HAAA-------LYAQDQLDHAFDMVYA------------ELLPQHK 285 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~--------~~~a-------~~~a~~~gi~~~~v~a------------~~~P~~K 285 (473)
+-|++.++++.|+++|++++++|... .... ...-...|+..+.++. -..|+-=
T Consensus 31 ~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~~ 110 (161)
T d2fpwa1 31 FEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLV 110 (161)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGGG
T ss_pred ECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccccHHH
Confidence 46899999999999999999999643 2221 2334556665333322 1223333
Q ss_pred HHHHHHHhhCC-cEEEEcCCcccHHHHHHCCe-eEEe
Q 038599 286 EELVELLKKDG-ATAMVGDGINDAPALAAVDI-GISM 320 (473)
Q Consensus 286 ~~~v~~l~~~g-~v~mvGDG~ND~~al~~Adv-gIa~ 320 (473)
.++++.+.-.- .+.||||...|..+-+.|++ +|-+
T Consensus 111 ~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i 147 (161)
T d2fpwa1 111 ERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRY 147 (161)
T ss_dssp GGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEEC
T ss_pred HHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEE
Confidence 33344443333 79999999999999999998 4444
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.98 E-value=0.011 Score=51.45 Aligned_cols=89 Identities=19% Similarity=0.174 Sum_probs=61.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCc--cce-eh------ccChhhHHHHHHHHhhCC-c
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGD----SHAAALYAQDQLDHAF--DMV-YA------ELLPQHKEELVELLKKDG-A 297 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD----~~~~a~~~a~~~gi~~--~~v-~a------~~~P~~K~~~v~~l~~~g-~ 297 (473)
.++|++.+.+++|+++|+++.++|+- ............|+.. +.+ .+ ...|+--...++.++-.. .
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~~ 176 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNE 176 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTTS
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcce
Confidence 46789999999999999999999952 2333344444555541 111 11 234555566666666554 8
Q ss_pred EEEEcCCcccHHHHHHCCe-eEEe
Q 038599 298 TAMVGDGINDAPALAAVDI-GISM 320 (473)
Q Consensus 298 v~mvGDG~ND~~al~~Adv-gIa~ 320 (473)
++||||..+|..+-+.|++ +|-+
T Consensus 177 ~l~IgD~~~Di~~A~~aG~~ti~V 200 (222)
T d1cr6a1 177 VVFLDDFGSNLKPARDMGMVTILV 200 (222)
T ss_dssp EEEEESSSTTTHHHHHHTCEEEEC
T ss_pred EEEEECCHHHHHHHHHcCCEEEEE
Confidence 9999999999999999998 5544
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.97 E-value=0.0086 Score=51.84 Aligned_cols=89 Identities=18% Similarity=0.129 Sum_probs=57.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHH----HHHHHHHcCCCc--cceeh-------ccChhhHHHHHHHHhhCC-c
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAA----ALYAQDQLDHAF--DMVYA-------ELLPQHKEELVELLKKDG-A 297 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~----a~~~a~~~gi~~--~~v~a-------~~~P~~K~~~v~~l~~~g-~ 297 (473)
.+.|++.+.+++|++.|+++.++|+..... ....-...++.. +.++. ...|+-=..+++.+.-.. .
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~e 178 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 178 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCccc
Confidence 357899999999999999999999654322 222222223221 12221 123333344455554443 7
Q ss_pred EEEEcCCcccHHHHHHCCe-eEEe
Q 038599 298 TAMVGDGINDAPALAAVDI-GISM 320 (473)
Q Consensus 298 v~mvGDG~ND~~al~~Adv-gIa~ 320 (473)
++||||...|..+-+++++ +|.+
T Consensus 179 ~l~VgD~~~Di~~A~~~G~~ti~v 202 (225)
T d1zd3a1 179 VVFLDDIGANLKPARDLGMVTILV 202 (225)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEEC
T ss_pred eeEEecCHHHHHHHHHcCCEEEEE
Confidence 9999999999999999999 5555
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=91.82 E-value=0.021 Score=47.90 Aligned_cols=89 Identities=12% Similarity=0.256 Sum_probs=56.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-CCCc--cceehc-----cChhhH--HHHHHHHhhCC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL-DHAF--DMVYAE-----LLPQHK--EELVELLKKDG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~-gi~~--~~v~a~-----~~P~~K--~~~v~~l~~~g-~v~m 300 (473)
.+.++..+.++.+++.|+++.++|+-+...+...-.+. |+.. +.++.. ..|..+ ..+.+.+.-.. .++|
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l~ 163 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 163 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEEE
Confidence 35788999999999999999999876544443333332 3321 122211 123322 23334444333 7999
Q ss_pred EcCCcccHHHHHHCCe-eEEe
Q 038599 301 VGDGINDAPALAAVDI-GISM 320 (473)
Q Consensus 301 vGDG~ND~~al~~Adv-gIa~ 320 (473)
|||..+|..+-+.|++ +|.+
T Consensus 164 vgDs~~di~~A~~aG~~ti~v 184 (197)
T d2b0ca1 164 FDDNADNIEGANQLGITSILV 184 (197)
T ss_dssp EESCHHHHHHHHTTTCEEEEC
T ss_pred EeCCHHHHHHHHHcCCEEEEE
Confidence 9999999999999998 5555
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=86.18 E-value=0.74 Score=40.56 Aligned_cols=19 Identities=11% Similarity=0.158 Sum_probs=16.8
Q ss_pred CChHHHHHHHHHHHcCCCC
Q 038599 142 SHPMAAALVDYARSLAIEP 160 (473)
Q Consensus 142 ~hpi~~Ai~~~a~~~~~~~ 160 (473)
++|.+.|++.++.+.++..
T Consensus 78 G~pTE~ALl~~a~k~g~~~ 96 (239)
T d1wpga3 78 GEATETALTTLVEKMNVFN 96 (239)
T ss_dssp SCHHHHHHHHHHHHHCTTC
T ss_pred CCCCcHHHHHHHHHhCCCh
Confidence 7999999999999888764
|